LOCUS       DATGJT010000001         2632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_311251, whole genome shotgun sequence.
ACCESSION   DATGJT010000001 DATGJT010000000
VERSION     DATGJT010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311251"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VKX24_00005"
     CDS             complement(<1..249)
                     /locus_tag="VKX24_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008292466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ06890.1"
                     /translation="MEIDDLHTEFRLRDARVRAVDGVSFSIDQGECVGMVGESGCGKS
                     TVGLSIMRLLPGNGRIASGSVRLLGRDLAALSERQMQRV"
     gene            363..1169
                     /locus_tag="VKX24_00010"
     CDS             363..1169
                     /locus_tag="VKX24_00010"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HLJ06891.1"
                     /translation="MAALVPRPAATVMVLRDNGAALEVLMLRRSLRSEFVSGAYVFPG
                     GALDEDDAHEAVYARCSGRDDAQASAVLGVDSGGLAYWVCAVRECFEEAGVLLALGPG
                     GAALGFDDPATEARFAEHRRALNAGERSFLDICVEEELTLPAGDLYYVGHWITPEGPP
                     RRYDTRFFATVAPGGQTAAHDAVETIDHMWTTPAAALARQEAGEIEMILPTLWNLRLL
                     DGFGTTAELAASVSSLGAIPTMEPEVVVDERGGRQVSVPLEPTDLGPAGG"
     gene            1172..2089
                     /locus_tag="VKX24_00015"
     CDS             1172..2089
                     /locus_tag="VKX24_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007226478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ06892.1"
                     /translation="MPVAPPPRPLPDAGVGPAVVTTGGAVEVAEGVLRLTAANPSQMT
                     GPGTNTYLVGSARLAVIDPGPDLAEHLDAIERVASERGAAIGWILVTHHHPDHAPGAA
                     VLAERTGAPLVAYGHKKGVDPDVAARDGFEVGGPGFVLRALHTPGHASDHLCWLLDGE
                     RLLFSGDHVMQGSTVVIKPPDANMADYLATLGRLADLDPPVRAIAPGHGRLIGDPQAA
                     IADVVAHRLKREAQVAAVLAGHGGPAGLDDLLPLVYGDVAESLLPVARGSLWAHLQKL
                     AADGRARLVGEESDPLASSESSRWAPLPS"
     gene            complement(2094..>2632)
                     /locus_tag="VKX24_00020"
     CDS             complement(2094..>2632)
                     /locus_tag="VKX24_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007577193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HLJ06893.1"
                     /translation="VQQFLEDAEWGDLDYLLVDLPPGTGDVQMGLARMLPRTELLLVT
                     TPPLAAQKVAARAADMARRGFLRVAGVIENMSDFTCEHGTSYALFGEGGGRRLAAEIG
                     VPLVGAVPIHPDIAAAGDAGVPVAAGSGELADVFSELARVVAEEVAPVVETAGCTARL
                     LDRIAEAVSAEPVAAPPS"
BASE COUNT          329 a         1012 c          968 g          323 t
ORIGIN      
        1 gacccgttgc atctggcgct cgctgagcgc cgccaggtcc cggccgagga ggcggaccga
       61 gcccgaggcg atgcggccgt tgcccggcag gaggcgcatg atcgagaggc cgaccgtcga
      121 cttgccgcaa cccgactcgc cgaccattcc gacgcattcg ccctggtcga tgctgaagga
      181 gacgccgtcg accgcccgca cccgcgcgtc gcgcaaccgg aactcggtgt gcaggtcgtc
      241 gatctccaag atggtgtcga tgcacgagac taccgaaggg gcagccgttc tcgaccacgg
      301 cctcacgccc ggcgaaccgg tgcgcctcac gtcggccgag gcccggtcgg taacctgcgg
      361 cgatggccgc actcgtcccc cgtccggccg cgaccgtgat ggtgctgcgg gacaacggcg
      421 ccgccctcga ggtgctgatg ctccggcgga gcctgcgctc cgagttcgtg agcggggcct
      481 acgtcttccc cggcggcgcg ctggacgagg acgacgccca cgaggcggtc tacgcccgct
      541 gctccgggcg cgacgacgcc caggcgagcg ccgtcctcgg ggtggactcg ggcggcctcg
      601 cctactgggt gtgcgcggtc cgggagtgct tcgaggaggc cggggtcctg ctcgccctcg
      661 gcccgggcgg cgccgcgctc ggtttcgacg acccggccac cgaggcgcgc ttcgccgagc
      721 accgacgcgc tctcaacgcc ggcgagcgct ccttcctcga catctgcgtc gaggaggagc
      781 tgaccctgcc cgcgggcgac ctctactacg tcggccactg gatcaccccc gaagggccgc
      841 cccgccgcta cgacacgcgg ttcttcgcga cggtggcgcc gggcggccag acggcggccc
      901 acgacgcggt ggagacgatc gaccacatgt ggaccacgcc cgcggccgcg ctggcccggc
      961 aggaggccgg cgagatcgag atgatcctgc ccacgctgtg gaacctgcgc ctcctcgacg
     1021 gcttcggcac gaccgccgag ctggcggcct cggtctcgag tctcggcgcc atccccacca
     1081 tggagcccga ggtcgtggtc gacgagcgcg gcggccggca ggtgagcgtg ccgctcgagc
     1141 cgaccgacct cgggccggcc ggggggtaag cgtgccggtc gcgcccccgc cccggcccct
     1201 ccccgacgcc ggggtcggcc cggcggtcgt gaccaccggc ggggcggtcg aggtggccga
     1261 gggggtcctc cgcctgaccg cggccaaccc ctcgcagatg acgggaccgg ggaccaacac
     1321 ctacctggtc gggtcggcgc ggctggccgt catcgacccc ggccccgacc tggccgagca
     1381 cctcgacgcc atcgagcgcg tcgcctcgga gcggggcgcg gccatcggct ggatcctcgt
     1441 gacccaccac cacccggacc acgcgcccgg cgcggcggtg ctcgccgaac gcaccggggc
     1501 gccactcgtc gcctatggcc acaagaaggg ggtcgacccc gacgtcgccg cccgcgacgg
     1561 gttcgaggtc ggcggcccgg gtttcgtgct gcgggcgctg cacaccccgg gccacgcgtc
     1621 ggaccacctg tgctggctcc tcgacggcga gcgcctcctg ttctcgggcg accacgtcat
     1681 gcaggggtcg acggtcgtga tcaagcctcc cgacgccaac atggccgact acctggcgac
     1741 cctcggccgg ctggcggacc tcgacccccc ggtgcgggcg atcgcgccgg gacacggccg
     1801 cctgatcggc gacccccagg cggcgatcgc cgacgtcgtg gcccaccggc tcaagcgcga
     1861 ggcccaggtg gcggccgtcc tggccgggca cgggggcccg gccggcctcg acgacctgct
     1921 tcccctcgtc tacggcgacg tggccgagtc gctgctcccg gtggcccggg gctcgctctg
     1981 ggcccacctc cagaaactgg cggccgacgg ccgggcgagg ttggtggggg aggagtccga
     2041 cccgctggcc tcgagcgagt cgagccgctg ggcgccgctc ccgtcctgag cggtcaggag
     2101 ggcggggcgg cgaccggctc cgccgagacg gcctcggcga tgcggtcgag gagcctcgcg
     2161 gtgcagcccg cggtctcgac gaccggcgcc acctcctcgg cgacgacccg ggccagctcc
     2221 gagaacacgt ccgccagctc cccgctgccg gcggccaccg gcaccccggc gtcgccggcg
     2281 gcggcgatgt cggggtggat cgggacggcg ccgacgagcg gcaccccgat ctcggcggcg
     2341 aggcgccggc ccccaccctc gccgaagagg gcgtagctcg tgccgtgctc gcaggtgaag
     2401 tcgctcatgt tctcgatgac gccggcgacg cggaggaagc cgcgccgggc catgtcggcg
     2461 gcgcgtgcgg ccaccttctg cgccgccagc ggcggcgtgg tcacgaggag cagctcggtg
     2521 cgcggcagca tgcgggccag ccccatctgc acgtcgccgg tgcccggcgg gaggtccacc
     2581 agcaggtagt cgaggtcccc ccactcggcg tcctccagga actgctgcac gg
//
LOCUS       DATGJT010000002         3595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_311363, whole genome shotgun sequence.
ACCESSION   DATGJT010000002 DATGJT010000000
VERSION     DATGJT010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3595
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311363"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VKX24_00025"
     CDS             <1..414
                     /locus_tag="VKX24_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008359136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methane monooxygenase/ammonia monooxygenase
                     subunit A"
                     /protein_id="HLJ06894.1"
                     /translation="YPLNFVWPTTMVPAGIFADWVLFKTKSFILTSVIGSAVFAFGWW
                     VSNYVMIAPFLQPAQWMDRILTVADIQGISFIHSQTPEYLRIVEHGTLRSFLGETQYV
                     ALVFGATVTVAGYWIGQFIGRMLAIWPIGRFMKKW"
     gene            428..1702
                     /locus_tag="VKX24_00030"
     CDS             428..1702
                     /locus_tag="VKX24_00030"
                     /inference="COORDINATES: protein motif:HMM:NF016619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methane monooxygenase/ammonia monooxygenase
                     subunit B"
                     /protein_id="HLJ06895.1"
                     /translation="MKRLAAVLLLALGTGLAFATPASAHGEKSQEAFLRMRTIGWTDV
                     TFSGGHMDPNGDMVIAQGEKFTIKGTAKLMNTWPDSLAKGLPRIGYINVATQGPCVEM
                     LTRTVNGVSTPSRIEITKGHYYDFEETLMGRRVGRWHVHPTFAVKGAGTLLGPGQWVR
                     VTPHAFTSSIKLYNGKTINLENYNLVSVWTLQVVGFLLGLIWIFWWTWWGKTAKGNPR
                     RTVTNPAVTLAIPLNDDGVAVGLNTKKDHRVVNIIALATALFLLIGWIWQASAFPVKI
                     PQQVVEYEPPLTAQDQAPTLAAVDARSAKYDYQAKVLRLEVDTKNVSNSPIQLASFVT
                     STLTFVNPASGTTPYGQYQDALKASPSGTIQPGQTATLTIDLPGSRFDEEHLLPRGES
                     QLTISGLLVFKDASGQRNSAEMEEPLQPKYIS"
     gene            1784..2098
                     /locus_tag="VKX24_00035"
     CDS             1784..2098
                     /locus_tag="VKX24_00035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06896.1"
                     /translation="MKYVVLAHGGHVVMLIMPVAAIFYLTLALRSERPKKSNPGTPRL
                     PTTDFGRQIHAATKPKEPKSAAAPVPSTFMASRRDKRVTGPKGVPRHLQPTSKPDSEP
                     SP"
     gene            2136..2993
                     /locus_tag="VKX24_00040"
     CDS             2136..2993
                     /locus_tag="VKX24_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005040742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ06897.1"
                     /translation="MSANGVELHYVRQGEGFPLVLLHGWPEFWRVWRKVIGPLAGRYD
                     VIAPDLRGFGASEKPAVPAEDGYGLDHHVADVLGLADALGLGRFGIVSHDVGAYVAQA
                     FARAHSDRLAGLFFFDCPYPGIGRRWAEADHLREIWYQSFNQLPWAAELVGSSRQACE
                     LYLRHFLSHWAHDPGAFDEEDVEAWVDNFLDGGNLQGGFNWYIAVNTARLELIRNGPP
                     ALEPIKVPVRVRWGGSDKVLKVEWADRLGDYFSDCDFAPVEGAGHFVAYERPEFAVRE
                     IYDFFSGVV"
     gene            3077..3367
                     /locus_tag="VKX24_00045"
     CDS             3077..3367
                     /locus_tag="VKX24_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06898.1"
                     /translation="MVTPVLANYGLLIFLPLFWLAAGIVFISIAMRDREDHEHAMVRK
                     LPTAKDHPLHHVRVSMAATRRKARVAARKAAGEAPAERKRPPGGRPPRLKAM"
     gene            complement(3369..>3595)
                     /locus_tag="VKX24_00050"
     CDS             complement(3369..>3595)
                     /locus_tag="VKX24_00050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06899.1"
                     /translation="WASIRTAGYQYIEWYGTDNVTVAWREYYDLGSDPWELHNVLIDP
                     TRPQPDVGALSAQLHQYEHCYGTTGPTACP"
BASE COUNT          603 a         1224 c         1169 g          599 t
ORIGIN      
        1 tacccgttga acttcgtctg gcccaccacg atggtgccgg cggggatctt cgccgactgg
       61 gtgctcttca agacgaagag cttcatcctc acgtccgtca tcggctcggc ggtgttcgcc
      121 ttcggctggt gggtgtcgaa ctacgtgatg atcgcgccgt tcctccaacc ggcccagtgg
      181 atggatcgca tcctcaccgt ggccgatatc caggggatct cgttcatcca cagtcagacc
      241 cccgagtacc tccggatcgt cgagcacggc acgctccgaa gcttcctcgg cgagacgcag
      301 tacgtggcgc tcgtcttcgg cgccaccgtc accgtcgccg gttactggat cggccagttc
      361 atcggtcgga tgctggccat ctggcccatc ggccgcttca tgaagaagtg gtagggggga
      421 cgagatgatg aaacgactgg cagcggtact gctgttggcc ctggggacgg gtctggcttt
      481 cgccaccccg gcctcggccc acggcgagaa gtcccaggag gccttcctcc ggatgcggac
      541 gatcggatgg accgacgtca cgttctccgg cggtcacatg gatcccaacg gcgacatggt
      601 catcgcccag ggtgagaagt tcaccatcaa gggcacggcc aagttgatga acacctggcc
      661 cgacagcctg gccaagggcc tgccgcggat cggctacatc aacgtcgcca cgcagggtcc
      721 gtgtgtcgag atgctgacgc ggacggtcaa cggcgtttcg acgccgagtc gcatcgagat
      781 cacgaagggc cactactacg acttcgagga gaccctcatg ggccggcggg tcggccgctg
      841 gcacgtgcac ccgaccttcg ccgtgaaggg cgcagggacg ctccttggtc cgggccagtg
      901 ggtccgggtc acgccccacg cgttcacgtc gtcgatcaag ctctacaacg gcaagaccat
      961 caacctggag aactacaacc tggtctcggt gtggacgctg caggtcgtcg gcttcctgct
     1021 cggtctcatc tggatcttct ggtggacgtg gtggggcaag acggccaagg gcaacccccg
     1081 gcggacggtg accaacccgg cggtgacgct cgccatcccg ctcaacgacg acggcgtggc
     1141 cgtggggctc aacaccaaga aggaccaccg ggtggtgaac atcatcgccc tcgccaccgc
     1201 cctcttccta ctcatcggct ggatctggca ggcatcggcc ttcccggtca agatcccgca
     1261 acaggtggtg gagtacgagc cgccgctgac cgcgcaggac caggcgccaa ccctggccgc
     1321 ggtcgacgcc cgatcggcga agtacgacta ccaggccaag gtgctccggc tggaggtcga
     1381 caccaagaac gtctccaaca gcccgatcca gctggcgagt ttcgtcacct cgacgctgac
     1441 gttcgtcaac ccggccagcg ggaccacgcc gtacggccag taccaggacg ccctcaaggc
     1501 gtcgccgtcg ggaaccatcc agcccggcca gacggcgacg ctgaccatcg acctgccagg
     1561 gtcgcgcttc gacgaggagc acctcctccc gaggggcgag tcccagctga cgatttccgg
     1621 actcctggtt ttcaaggacg catcggggca aaggaactcg gccgagatgg aggagccgct
     1681 gcagccgaag tacatctcct agagcaacct tgggaccggc ggtcggcacg tcgtacaatg
     1741 acgtcgccgg ccgccggttc gggtgcggcc agaagggaac gggatgaagt acgtggtcct
     1801 cgcccacggg ggacacgtgg tcatgttgat catgcccgtg gcggccatct tctacctgac
     1861 cctcgccctt cggtcggagc ggccgaagaa gtcgaacccg ggaacacccc ggcttcccac
     1921 cactgacttc ggccgccaga ttcacgccgc cacgaagccc aaggaaccga agtcggccgc
     1981 tgccccggtc ccgtcgacgt tcatggcgtc ccgccgggac aagcgggtca ccggccccaa
     2041 aggggtcccg cggcatctgc agccgacatc caagcctgac tccgagccct cgccctaggt
     2101 caccgtcgca gcccgtggat ctcggccatc accacttgag tgccaacggg gtcgagctcc
     2161 actatgtccg tcagggggag ggattcccgc tggtgctcct ccacggctgg ccggagttct
     2221 ggcgtgtctg gcgcaaggtc atcggacctc tggccggccg gtacgacgtg atcgcccccg
     2281 atctccgggg cttcggagcg tcggagaagc cggccgtccc ggccgaggac ggctacgggc
     2341 tcgaccacca cgtggccgac gtcctcggtc tggccgacgc cctcgggctc ggccggttcg
     2401 gcatcgtcag ccacgacgtc ggggcctacg tcgcccaggc cttcgcccgg gcccattccg
     2461 accggctggc ggggctcttc ttcttcgact gcccctatcc gggcatcgga cggcgttggg
     2521 cggaggccga ccacctgcgg gagatctggt accagtcgtt caaccagctg ccgtgggcgg
     2581 ccgaactggt cggctccagc cggcaggcct gcgagctcta tctccggcac ttcctgagcc
     2641 actgggccca cgacccgggc gccttcgacg aggaggacgt ggaggcctgg gtcgacaact
     2701 tcctcgacgg cggaaatctg caaggcgggt tcaactggta catcgcggtc aacactgccc
     2761 gcttggaact catccgcaac ggcccgcccg cgctggagcc gatcaaggtc cccgtccggg
     2821 tgcgctgggg cggaagcgac aaggttctga aggtcgaatg ggccgatcgg ctcggcgact
     2881 acttctccga ctgcgacttt gccccggtgg aaggcgccgg ccacttcgtc gcctacgaac
     2941 gtcccgaatt cgccgtacgg gagatctacg atttcttttc gggcgtcgtc tgattggaaa
     3001 gaaccggtac gccaccgcta cgaatgggaa gtattgacgg aaggaaaacc tcggccaccg
     3061 agcgacttgg agccacatgg tcacgccggt tctcgccaac tacggccttc tcatcttcct
     3121 tccgctgttc tggctcgcgg ccggcatcgt cttcatctcc atcgcgatga gggaccggga
     3181 agatcacgag catgcgatgg tgcggaagct gccgaccgcc aaggaccatc cgctccacca
     3241 tgtccgggtc tcgatggccg ccacccgccg gaaggcccgg gtggccgccc ggaaggcggc
     3301 gggggaggcg ccggcggagc ggaagcgccc gcccggcggc cggccgcccc gcctgaaggc
     3361 gatgtagctc aggggcaggc ggtcggcccg gtcgtgccgt aacagtgctc gtactggtgc
     3421 agttgcgctg acagcgcgcc cacgtccggc tggggccttg tcgggtcgat caggacgttg
     3481 tggagctccc aggggtcgct gccgaggtcg tagtactccc gccaggccac cgtgacgttg
     3541 tcggtcccgt accactcgat gtactggtag ccggcggtcc ggatcgacgc ccagg
//
LOCUS       DATGJT010000003         3407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_830109, whole genome shotgun sequence.
ACCESSION   DATGJT010000003 DATGJT010000000
VERSION     DATGJT010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3407
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830109"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="VKX24_00055"
     CDS             <1..1033
                     /locus_tag="VKX24_00055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06900.1"
                     /translation="MEAPEMGVDELCTDDLLVRRVVTGGAGAWGVGILIDGGGDDTYL
                     GKSVALGAGHFGGTGVLLDQGGNDHYKALRLSEGFGTLGGTGVLRDTAGDDTYDYYLP
                     RPKYPGAPDHSLGAGGALDTGGNCDGGSRWNLGSGFLGGTGILVDDAGNDTYRAAPPT
                     KHEPGASGILRETGSMGFGDGGFGIFLDNAGHDTYDGMPGRADGATVAPSDKSQGFFR
                     DSGGGAAATAADPMADNPLPDNQVADGGNVTAWFTHYIPDKIIVAHGTTPRFFNPDVY
                     GGPFGGKRHTITEVRNAHFDGPGPPRFDVSVDFGHVEPITGVEKLRPGTYDFTCRVHP
                     FMAGKLIVQ"
     gene            1057..2046
                     /gene="hemB"
                     /locus_tag="VKX24_00060"
     CDS             1057..2046
                     /gene="hemB"
                     /locus_tag="VKX24_00060"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013427406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HLJ06901.1"
                     /translation="MGFPEQRPRRLRRTAAVRRLVAETRLSVDDLVAPLFVKEGIDEP
                     QPIPSMPGVVQHTQESLRKEVRALAGLGIPGVILFGVPARKDARGSGGDDPDGVVQVA
                     LRNLRDEVGDRLVLMADNCLDEYTDHGHCGILTAGGPSGVVTVDNDATLERYASIAVA
                     QAEAGADVVAPSGMMDGQVGAIRAALDGTGHTGVAILAYAAKYASALYGPFRDAAECA
                     PKFGDRRAYQMDAANGREALLEVALDVAEGADIIMVKPALAYLDVIAAVRAAVDLPVA
                     AYHVSGEYAMVEAAAERGWIDGDAVAREHVTAIRRAGADFVLTYFARRLAEQA"
     gene            2043..3305
                     /gene="hemL"
                     /locus_tag="VKX24_00065"
     CDS             2043..3305
                     /gene="hemL"
                     /locus_tag="VKX24_00065"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011602224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HLJ06902.1"
                     /translation="MTLFERALARIPGGVNSPVRAFGSVGGEPFFAARASGAHVWDAD
                     GRRYVDLVQSWGASILGHADPGVVEAVTRAAAAGTSYGIPTEAEVRLAEEVCTRVPSV
                     EKLRLVSSGTEATMTAVRLARGVTGRDVVLKFAGCYHGHADALLASAGSGVATLGLPG
                     SAGVPAGAVAGTVVVPYNDEAALDEAFALHGPQLAGVIVEGVAANMGLVPPADGFLAG
                     LRRRCSAAGSLLVMDEVITGFRLGDDGAQGRYGVIPDLSCFGKVLGGGLPLAAFGGPA
                     QIMDHLAPLGPVYQAGTLSGNPLATAAGLAVLARLDSAAYARLDAIATALADGLSGAL
                     AAAGVPAQVPRVGPLVGLFFSDTPVTDYASAQAADAKRYARFFHEMLARGIYLPPSPF
                     EALFPSLSHGPAEIEAITTAAAAAAATL"
BASE COUNT          451 a         1310 c         1203 g          443 t
ORIGIN      
        1 gatggaggcg cccgagatgg gtgtcgacga gctctgcacc gacgacctgc tggtgcgccg
       61 ggtggtgacc ggcggcgccg gggcatgggg ggtcggcatc ctcatcgacg gcggcggcga
      121 cgacacgtac ctgggcaagt ccgtggcgct gggcgcgggc cacttcggcg ggaccggagt
      181 cctcctcgac cagggcggaa acgaccatta caaggcgctg cgcctctccg agggcttcgg
      241 cacgctgggc ggcaccggcg tcctgcggga caccgccggc gacgacacct acgactacta
      301 cctgccccgg ccgaaatacc ccggcgctcc cgaccactcg ctcggcgccg gcggcgccct
      361 cgacaccggc gggaactgcg acggtggctc ccggtggaac ctgggcagcg ggttcctcgg
      421 cggcaccggc atcctggtcg acgacgccgg caacgacacc taccgcgccg cgccgcccac
      481 caagcacgag ccgggcgcct cggggatcct gcgggagacg ggctcgatgg ggttcggtga
      541 cggcggcttc ggcatcttcc tcgacaacgc cggccatgac acctacgacg gcatgcccgg
      601 gcgggccgac ggagccaccg tcgccccgag cgacaagtcc cagggcttct tccgcgactc
      661 gggcggggga gcggcggcga cggccgccga ccccatggcc gacaacccct taccggacaa
      721 ccaggtggcc gacggcggga acgtgacggc ctggttcacc cactacatcc ccgacaagat
      781 catcgtcgcc cacgggacca cgccgcgctt cttcaacccc gacgtctacg gcggcccctt
      841 cggcgggaag cgacacacga tcaccgaggt gcgcaacgcc cacttcgacg gccccgggcc
      901 gccgcgcttc gacgtcagcg tcgacttcgg gcacgtggag cccatcaccg gcgtcgagaa
      961 gctcaggccc ggcacctacg atttcacctg ccgcgtccat cccttcatgg ctggcaagct
     1021 gatcgtccag tagaggtccc ggataggctg gacgtcgtgg gatttcccga gcagcgtccc
     1081 cgccggctgc ggcgcacggc ggccgtccgg cggctggtgg ccgagacccg cctctcggtc
     1141 gacgacctcg tcgcgccgct gttcgtcaag gaaggcatcg acgagccgca gccgatcccg
     1201 tcgatgcccg gcgtcgtcca gcacacgcag gagagcctcc gcaaggaggt ccgggcgctg
     1261 gccggtctcg ggatccccgg cgtcatcctg ttcggcgtgc cggcccggaa ggacgcccgg
     1321 ggctcgggcg gcgacgaccc cgacggcgtc gtccaggtgg cgctgcgcaa cctgcgcgac
     1381 gaggtcggcg accggctcgt cctgatggcc gacaactgtc tcgacgagta caccgaccac
     1441 ggtcactgcg ggatcctgac cgccggcggc ccgagcggag tcgtgactgt cgacaacgac
     1501 gccacgctgg agcgctacgc ctccatcgcc gtggcccagg ccgaggccgg ggccgacgtc
     1561 gtcgctccca gcgggatgat ggacgggcag gtcggcgcca tccgggcggc gctcgacgga
     1621 accggccaca ccggcgtcgc catcctcgcc tacgccgcca agtacgcctc ggcgctctac
     1681 ggcccgttcc gcgacgccgc cgaatgcgcc ccgaagttcg gcgaccggcg ggcctaccag
     1741 atggacgccg ccaacggccg ggaggccctc ctcgaggtgg cgctcgacgt ggccgagggc
     1801 gccgacatca tcatggtgaa gccggcgctg gcctacctcg acgtgatcgc cgccgtgcgg
     1861 gccgcggtcg acctgccggt ggcggcgtac cacgtgagcg gcgagtacgc catggtcgag
     1921 gcggcggccg aacggggttg gatcgacggc gacgccgtgg cccgggagca cgtgaccgcc
     1981 atccgccggg cgggcgccga cttcgtcctg acctacttcg cccgccggct ggccgagcag
     2041 gcgtgacgct cttcgagcgc gccctggccc ggatcccggg cggggtgaac tcgccggtgc
     2101 gggccttcgg gtcggtcggc ggcgagccgt tcttcgccgc ccgggcgtcg ggcgcccacg
     2161 tctgggacgc cgacggccgc cgctacgtcg acctggtgca gtcgtggggg gcgtcgatcc
     2221 tcggccacgc cgaccccggc gtcgtcgagg cggtgacccg ggcggcggcg gccggcacgt
     2281 cgtacgggat accgaccgag gccgaggtcc gcctggccga ggaggtctgc acccgcgtgc
     2341 catcagtgga gaagctccgc ctcgtgtcgt cggggacgga ggccacgatg acggccgtcc
     2401 gcctggcccg cggcgtgacg gggcgcgacg tcgtcctcaa gttcgccggc tgctaccacg
     2461 gccacgccga cgccctgctg gcctcggccg gcagcggcgt cgccaccctc ggcctgcccg
     2521 gctcggccgg cgtgccggcc ggggcggtgg ccggcaccgt cgtcgtcccc tacaacgacg
     2581 aggcggccct cgacgaggcg ttcgcccttc acggcccgca gctggcgggc gtgatcgtcg
     2641 agggcgtggc ggccaacatg ggcctcgtcc cgccggccga cgggttcctg gccgggctcc
     2701 ggcgccgctg ctccgccgcc ggatcgctgc tggtcatgga cgaggtcatc accggcttcc
     2761 ggctgggcga cgacggcgcc cagggccgct acggcgtcat ccccgacctg tcgtgcttcg
     2821 ggaaggtgct cggcggcggc ctgccgctgg cggctttcgg cgggccggcc cagatcatgg
     2881 accacctcgc ccccctcggg ccggtgtacc aggcgggcac cctgtccgga aacccgctgg
     2941 ccaccgccgc cggcctcgcc gtcctcgccc ggctggactc cgccgcctac gcccgcctcg
     3001 acgccatcgc caccgccctc gccgacgggc tgagcggcgc attggccgcc gccggagtcc
     3061 ccgcccaggt cccccgcgtc ggccccctcg tcggcctctt cttctccgac accccggtca
     3121 ccgactacgc ctcagcgcaa gccgccgacg ccaagcgcta cgcccgcttc ttccacgaaa
     3181 tgctcgcccg cgggatctac ctccccccaa gccccttcga agcattgttc cccagcctgt
     3241 cccacggccc cgccgagatc gaagcgatca ccacggcagc agccgcagcg gccgcgacgc
     3301 tttagcagcc ggttttcacc caagccgcca gaggaccgcg gagacgaagg agggggcgga
     3361 ggggtcgccg cggagcgcgt ggtgtttgcc ggagcggcga cccctcc
//
LOCUS       DATGJT010000004         2247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1348876, whole genome shotgun sequence.
ACCESSION   DATGJT010000004 DATGJT010000000
VERSION     DATGJT010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1348876"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VKX24_00070"
     CDS             complement(<1..400)
                     /locus_tag="VKX24_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MogA/MoaB family molybdenum cofactor
                     biosynthesis protein"
                     /protein_id="HLJ06903.1"
                     /translation="MPLMAKVLTVSDGVVAGTRDDVSGRALTERLLSEGYLVVEHRIT
                     EDGTDAVAAALRELTADFAGLVVTTGGTGFGPRDLTPEGTRAVIEREAPGMAEAMRLV
                     SHNQQLPHGMLSRAVCGAAGEALICNLPGSS"
     gene            518..1546
                     /locus_tag="VKX24_00075"
     CDS             518..1546
                     /locus_tag="VKX24_00075"
                     /inference="COORDINATES: protein motif:HMM:NF012449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HLJ06904.1"
                     /translation="MAEDLGGFTSPSRRTGLVATLGPASLRPAVLRGFAAQGVDLLRL
                     NLSHVALGDVEDTLRTARIHSRLPLCLDTEGAQVRVGLVATGVALRVGQPVRLVQEKA
                     LGTERQLSLRPEAVFSSLTPGTTIAVDEVVLRVAVVEKGRATAIVVAGGRVRSNRAVV
                     LDPAPVLPALTEKDRTAVDIAAAAGVDHFALGYAASAAGVAELRSMVPAGARVLARID
                     SRAGVERRTEIIAAADTVVVGRSHLAAELPIEQVPFLQKAIAREGAAAGTPVWVSVGR
                     GAATLTATVAEANDVANLLLDGVSGLVLTGETAVGSDPFGAVERIARLLAGFEEMGRE
                     VTPMATLG"
     gene            complement(1521..>2247)
                     /locus_tag="VKX24_00080"
     CDS             complement(1521..>2247)
                     /locus_tag="VKX24_00080"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006905030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HLJ06905.1"
                     /translation="ASQAVAAALGARPGERILDLAAAPGGKATALAEIMGDDGLVVAA
                     DFRPGRVARVRDAAVRLGLRSVQVLSADGRRLPLRPPPDAEADSSPGARSAGPPSADR
                     PAAGDLGRFDRVLLDAPCSGLGVLRRRPEARWRLQPEAIDRAAGLQRELLTAAVARVR
                     PGGLVAYSVCTLTREETLDIDAWAGATFPGLAAVDGPGPPWRPHGRGALLLPTAAGTD
                     GMFLLLLRAPPGARELSRASPSG"
BASE COUNT          267 a          804 c          908 g          268 t
ORIGIN      
        1 tcgaagaccc gggcaggttg cagatgaggg cctcgccggc ggcgccgcac accgcccggg
       61 acagcatccc gtgcgggagc tgctggttgt ggctgacgag ccgcatggcc tcggccatgc
      121 ccggggcctc ccgctcgatc accgcccggg tgccctcggg ggtgaggtcg cgggggccga
      181 aaccggtccc gccggtggtg acgacgagcc cggcgaaatc ggccgtcagc tcccgtaagg
      241 cggccgccac ggcgtccgtg ccgtcctcgg tgatgcggtg ctcgacgacg aggtacccct
      301 cggagagcag gcgctcggtc agcgcccggc ccgacacgtc gtcgcgggtg ccggcgacga
      361 ctccgtcgga cacggtcagg accttggcca tgagcggcat ggcgcccgat cgtaacgggc
      421 ccgctgaacc gccagtgctg ttgcgagggt ggttcctgtt gcctgtcagg gaatcttttc
      481 gtaagttacg cccgaccttt tggcggaggg ggtaggtatg gcggaggatc tcggggggtt
      541 cacgagcccc tctcggcgca ccgggctggt cgccaccctg gggccggcgt ccctacggcc
      601 ggcggtcctg cggggcttcg ccgcgcaggg cgtcgacctc ctccggctga acctgtccca
      661 cgtggccctc ggcgacgtgg aggacaccct gcggacggcc cggatccact cccgcctgcc
      721 gttgtgcctc gacaccgagg gagcgcaggt gcgggtcggg ctagtggcca ccggcgtcgc
      781 cctacgggtc ggccagcccg tccggctggt gcaggagaag gcgctgggga cggaacggca
      841 gctgtcgctg cgacccgagg cggtcttcag ctcgctgacg ccggggacga cgatcgccgt
      901 cgacgaggtc gtcctgcggg tggccgtggt ggagaagggc cgggcgacgg ccatcgtcgt
      961 ggccgggggg cgggtgcgct ccaaccgcgc cgtggtcctc gaccccgcgc ccgtgctccc
     1021 ggcgctgacc gagaaggacc gcaccgccgt ggacatcgcc gccgccgccg gggtcgacca
     1081 tttcgccctc ggctacgccg cctcggccgc cggggtggcc gagctccggt cgatggtgcc
     1141 ggccggcgcc cgggtgctgg cccggatcga cagccgggcg ggggtggagc gccgcacgga
     1201 gatcatcgcc gccgccgaca ccgtcgtcgt cggccgcagc cacctggccg ccgagctgcc
     1261 catcgagcag gtgccgttcc tgcagaaggc catcgcccgg gagggcgcgg cggccggcac
     1321 gccggtgtgg gtgtccgtgg gacggggcgc ggcgacgctg accgccacgg tggccgaggc
     1381 caacgacgtc gccaacctcc tcctcgacgg ggtctcggga ctggtgctga ccggcgagac
     1441 ggcggtcggc agcgacccgt tcggcgccgt cgagcggatc gcccggctgc tcgccggctt
     1501 cgaggagatg ggccgggagg tcaccccgat ggcgacgctc ggctgagctc ccgggccccg
     1561 ggcggagccc gcaggagcag caggaacatg ccgtcggtgc cggcggcggt gggaaggagc
     1621 agcgcccccc ggccgtgggg acgccagggc ggcccgggcc cgtcgacggc ggcgaggccg
     1681 gggaaggtgg cgcccgccca ggcgtcgatg tccagcgtct cctcccgggt cagcgtgcag
     1741 acggagtagg cgacgagccc gccgggccgg acgcgggcga cggcggcggt gaggagctcc
     1801 cgctgcagtc cggcggcccg gtcgatggct tccggctgca gccgccagcg ggcctcgggc
     1861 cgccgccgga gcacgccgag gccggagcac ggggcgtcga gcagcacccg gtcgaaccgg
     1921 ccaaggtcgc cggccgcagg ccgatcggcg gacggcgggc cggcggagcg agcgccgggc
     1981 gaggagtcgg cttcagcgtc cggcggcggg cggaggggga ggcgccgccc gtcggcggag
     2041 aggacctgca ccgatcggag cccgaggcgc accgcggcgt cgcggacccg ggcgacccgg
     2101 cccggccgga agtcggcggc gacgacgagc ccgtcgtcac ccatgatctc ggccagtgcg
     2161 gtggccttgc cgccgggggc ggcggccagg tcgaggatcc gctcccccgg ccgggcgccg
     2221 agcgcggcgg ctacggcctg gctcgcc
//
LOCUS       DATGJT010000005         3662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_726410, whole genome shotgun sequence.
ACCESSION   DATGJT010000005 DATGJT010000000
VERSION     DATGJT010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_726410"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(353..2116)
                     /locus_tag="VKX24_00085"
     CDS             complement(353..2116)
                     /locus_tag="VKX24_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019634795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HLJ06906.1"
                     /translation="MAKIASELLWERLADWGVDTVFGLPGDGINGLMEGLRRHQDRIR
                     FVLVHHEEAAAFMASAHAKMTGKLGVCLATSGPGGIHLLNGLYDAKLDHAPVLAVTGM
                     QETQLLGTGYQQEVHLEKLFADVAEYEAMIHVPVQIPTLVDLAVRTSLSRRTVTHLTI
                     PNDIQVADAEANPWESVAPARTPATAPVLLDAPGVPRPADLERAAAVLNAGRKIVLLA
                     GAGALRARSEVLAVAERLASPIVKTLPGKAAVPDDHPLTTGGIGLLGTRPSEDAMENA
                     DTLFMVGTNFPYTKHLPPPGKARVVQIEADPVRAGNRIPTEVPMVGDAAETLQALLPL
                     LQPHGDRSFLETAQAGMADWREKMAALEDGERDPIQPQYLMRMIDRHAANDAILASDS
                     GTIATWSARHFDIRGDRQFYLSGNLATMAPGLPYTIAAQLAHPDRQCIAFVGDGGFAM
                     LMAEVLTALRHDLPIKVFINNNHSLGQILWEQMILGYPEFGVRHSGVANYAAFVESNG
                     GRGIRVEKAGDVESAVKEALRHKGLAVVDVLTNPDEPPMPPKVTYDQAKGFAQAFLKG
                     QPHRATIATTLFRDKLSELRS"
     gene            2177..2641
                     /locus_tag="VKX24_00090"
     CDS             2177..2641
                     /locus_tag="VKX24_00090"
                     /inference="COORDINATES: protein motif:HMM:NF020873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3565 domain-containing protein"
                     /protein_id="HLJ06907.1"
                     /translation="MRRAIEGFHQDEDGDWVAELSCLHGQHLRHRPPFQDRAWVLTEA
                     GRAERLGGPIDCPLCDRAELPEGLVLARTAGPFDAGSLPAGLQKDHRVAEHTWGRLRV
                     VEGSVGFSMATDPPCSVRLVAPASQPIPPGVAHSVAVEGPVVLAVDFLVPDR"
     gene            2669..2917
                     /locus_tag="VKX24_00095"
     CDS             2669..2917
                     /locus_tag="VKX24_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010156787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3039 domain-containing protein"
                     /protein_id="HLJ06908.1"
                     /translation="MTDVTPVEVEEVVAERVDEGDHDRFAHVVYPASAVMEAMLTGVP
                     CTALCGKRWVPSRDPKRYPVCPTCKEIVEGHGFRVPSG"
     gene            2941..3423
                     /locus_tag="VKX24_00100"
     CDS             2941..3423
                     /locus_tag="VKX24_00100"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HLJ06909.1"
                     /translation="MELRKVLVGIDGSPAATAAQCWAADAVRDCGGEVLALHVVGSPL
                     VAQAAEDVVHGLGMAESGLERSHAESARLLEEEWCRPLRDARVTYRTLVAKGDPVHEM
                     LHTARKEDVDLIVIGHQADSGFVHRLFRGLSDNLLDHARRPVVVVPYSKVPSKVSASR
                     "
     gene            complement(3407..>3662)
                     /locus_tag="VKX24_00105"
     CDS             complement(3407..>3662)
                     /locus_tag="VKX24_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019357842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HLJ06910.1"
                     /translation="GGFDTPILHGLCTYGIACKAVVDRCCDGDVNAVARYQVRFTGVV
                     FPGETVVTSMWREADGRIVLSATTKERGQPVLSNAAISTR"
BASE COUNT          500 a         1283 c         1344 g          535 t
ORIGIN      
        1 cggcgccggc cgggttgcgg acgggccggc cggccagccc ggccaccgag acgaggccgc
       61 gggcggccgt gggcaggaag cggatggtca tggcgaactc cccggactga ggaacgaccg
      121 gaagcggacg gcggcgcgcg ctcgccgtca gccccgcagg ttccgaggag gaccgctcag
      181 tgactcaggc ggaaaccgga ccggccgggt ggagggcgcg ccgctgcgga ctccggggtt
      241 tgctccgctt gcgcacgcgc ctcacctcct cgggaaaggg tcctgacatc ttgtaccagg
      301 ggaggtcgac gatcgggaac ggccttcagc ttccttcagg aacagtgccg ggtcaggagc
      361 ggagctccga cagcttgtcc cggaacagcg tggtggcgat cgtggcccgg tggggctggc
      421 ccttgaggaa ggcctgggcg aaccccttgg cctggtcgta ggtcaccttg ggcggcatcg
      481 gcggctcgtc ggggttggtg aggacgtcga cgacggccag gcccttgtgc cgcaaggcct
      541 ccttgaccgc cgactccaca tcgcccgcct tctccacccg gatgccccgg ccgccgttcg
      601 actccacgaa cgcggcgtag ttggccaccc ccgagtggcg gacgccgaac tccggatagc
      661 cgaggatcat ctgctcccac aggatctggc ccaggctgtg gttgttgttg atgaacacct
      721 tgatcggcag gtcgtggcgc agcgcggtga gcacctcggc catcagcatg gcgaagccgc
      781 cgtcgccgac gaaggcgatg cactgccggt cgggatgggc cagctgggcg gcgatggtgt
      841 aggggagccc cggtgccatc gtggccaggt tccccgacag gtagaactgc cggtcgcccc
      901 ggatgtcgaa gtgccgggcc gaccaggtgg cgatcgtccc ggagtccgag gccaggatgg
      961 cgtcgttggc ggcgtggcgg tcgatcatcc gcatgaggta ctgcggctgg atcgggtcgc
     1021 gctcgccgtc ctccaacgcc gccatcttct cccgccagtc cgccatcccg gcctgggcgg
     1081 tctcgaggaa cgaccggtcg ccgtggggtt gcagcagcgg cagcagcgct tgcagcgttt
     1141 cggcggcgtc gccgaccatc ggcacctcgg tcgggatccg gttgccggcc cgcaccgggt
     1201 cggcctcgat ctggaccacc cgcgccttgc ccggcggggg caggtgcttg gtgtagggga
     1261 agttcgtccc gaccatgaac agcgtgtcgg cgttctccat ggcgtcctcg gacgggcggg
     1321 tgccgaggag cccgatgccc ccggtggtga gcgggtggtc gtcgggcacc gccgccttgc
     1381 cgggcaaggt cttcacgatc gggctggcga gccgctcggc cacggccagg acctccgagc
     1441 gggcccgcag cgccccggcg ccggccagca ggacgatctt ccgcccggcg ttgaggaccg
     1501 cggccgcccg ctccaggtcg gccggccggg ggacgccggg ggcatcgagg aggaccgggg
     1561 cggtggccgg cgtccgggcc ggggcaacgg actcccaggg gttggcctcg gcgtcggcca
     1621 cctggatgtc gttggggatc gtcaggtggg tcaccgtccg ccgggacagg gacgtgcgga
     1681 cggccaggtc gacgagcgtc gggatctgga ccggcacgtg gatcatcgcc tcgtactccg
     1741 ccacgtcggc gaagagcttc tcgaggtgga cctcctgctg gtagcccgtc cccagcagct
     1801 gcgtctcctg catgccggtg acggccagga ccggggcgtg gtcgagcttg gcgtcgtaga
     1861 gcccgttgag caggtggatc ccgcccggcc ccgacgtcgc caggcagacg ccgagcttcc
     1921 cggtcatctt ggcgtgggcc gaggccatga aggccgccgc ctcctcgtgg tgcaccagca
     1981 cgaaccggat gcggtcctgg tggcggcgca ggccctccat gagcccattg atgccgtcgc
     2041 cgggcaggcc gaagacggtg tcgacgcccc aatcggcgag acgttcccac agcagttccg
     2101 atgcgatctt tgccataccg cccgactacc ccgcccgcgg ccctggagaa acgagagccg
     2161 tgggtacgtt gccgacgtgc gacgcgccat cgaggggttc catcaggacg aggacggcga
     2221 ctgggtggcc gagctgtcct gcctccacgg ccagcacctc cggcaccgcc cgccgttcca
     2281 ggaccgggcc tgggtgctga ccgaggccgg ccgggccgag cggctcggcg gcccgatcga
     2341 ctgccccctc tgcgaccggg ccgagctgcc cgagggcctc gtcctggccc gcaccgccgg
     2401 cccgttcgac gccgggagcc tccccgccgg gctgcagaag gaccaccgcg tcgccgagca
     2461 cacctggggc cgcctccggg tcgtcgaggg atcggtgggg ttctcgatgg ccaccgaccc
     2521 gccgtgctcg gtccgcctcg tcgcccccgc ctcgcagccc atcccacccg gcgtcgcgca
     2581 ctcggtggcc gtggaggggc ccgtcgtcct ggccgtcgac ttcctcgtcc cggaccggtg
     2641 accgccgccg gtgtggcacc ctgaaggcat gaccgacgtg acgccagtcg aagtcgagga
     2701 ggtcgtggcg gaacgggtcg acgagggcga ccacgaccgc ttcgcccacg tggtctaccc
     2761 ggcctcggcg gtgatggagg ccatgctcac cggcgtaccc tgcaccgccc tgtgcgggaa
     2821 gcggtgggtg ccgtcccggg acccgaagcg ctacccggtc tgcccgacgt gcaaggagat
     2881 cgtggaaggg cacggcttcc gcgtgccgtc tgggtgacac atcgtagtac gataaaagtc
     2941 atggagctga ggaaggttct cgtgggaatc gacggctctc cggcggcgac ggccgcccag
     3001 tgctgggccg ccgacgccgt gcgggactgc ggcggcgagg tcctcgccct ccacgtcgtg
     3061 ggctcgccac tggtggccca agcggcggag gacgtcgtcc acggcctcgg gatggcggag
     3121 tcgggtctcg agcggtcgca cgccgagtcg gcccgcctgc tcgaagagga gtggtgccgg
     3181 cccttgcgcg acgcccgggt gacgtaccgg acgctggtgg ccaagggcga ccccgtccac
     3241 gagatgctcc acaccgcccg gaaggaggac gtcgacctca tcgtcatcgg ccaccaggcc
     3301 gactcgggct tcgtccaccg gctgttccgg ggtctctccg acaacctcct cgaccacgcc
     3361 cgccggccgg tggtcgtcgt gccctactcg aaggtgccgt cgaaggtcag cgcgtcgaga
     3421 tagcggcgtt ggacaggacg ggctgccccc gctccttcgt cgtggccgac agcacgatcc
     3481 gcccgtccgc ctcccgccac atcgacgtca ctacggtctc gccgggaaag accacgccgg
     3541 tgaagcggac ctggtagcgg gccacggcgt tgacatcgcc gtcgcagcag cggtcgacca
     3601 ccgctttgca ggcgatcccg taggtgcaca gcccgtggag gatgggggtg tcgaacccgc
     3661 cg
//
LOCUS       DATGJT010000006         3560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_830182, whole genome shotgun sequence.
ACCESSION   DATGJT010000006 DATGJT010000000
VERSION     DATGJT010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830182"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VKX24_00110"
     CDS             complement(<1..368)
                     /locus_tag="VKX24_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HLJ06911.1"
                     /translation="MTWWRNAVIYQIYPRSYRDSDGDGVGDLAGITERLDHLAWLGVD
                     AIWITPITVSPDTDWGYDVAHYTAVQPVLGDLERFDRLVAEAGRRDIRVVLDLVPNHT
                     SSKHPWFRESRTSKTSAKRE"
     gene            614..2638
                     /locus_tag="VKX24_00115"
     CDS             614..2638
                     /locus_tag="VKX24_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06912.1"
                     /translation="MVRARSRLALAAALMAALAGGFGPLAAAATAAPAGSGGTGPDPR
                     LAELASPSAFRGLLYTGLSLGRSGSACAGAFEAKSRAGASLGCSHGPDPAPPGTDVRR
                     GRSDGQVAADTAGARTADAAGTTEELGSIGCIADGVSGDRVQAIYAVPADRPDRSATV
                     VPAIRSTYAPRVDWQFNQSAAETGGVAHPQFVTEPDAAGTGCRLSVAVVHLSAAGDDS
                     FSNTTSELKALGYNRADRKYLVWMDSDVLCGIGSLYADTRPGLSNLNNGYAAMFARVD
                     SACWNYAEGHELMHTLGAVQQGAPHATINGHCFDEPDEMCYDDGSGVAMITVCTGRND
                     ALFDCNHDDYYYAGTPPALNWLATHWNTWNSSWLVRAPLSAVATGSPPTSGSTGSTGS
                     TASSGSSGQSTTGGTGIAVLPPVGGSGPRQASSGYWMLTADGHVNPFGDAAFFGQPFP
                     LAAGVTAVHLEPTPSGAGYWVLDTTGKVRAYGDAVWFGNVGAGTMLPGERAVGLSATP
                     SGAGYWVFTSRGRAVPFGDAGFFGDTSGLPLNRPVIGSVATPTGHGYWIFASDGGIFT
                     FGDAAFFGSTGSLRLNQPVVAMAASPTNGGYWLVGADGGLFAFGDAGFFGSMGGVHLN
                     RPVSAVVPGASGYLMVGQDGGAFSFGDVSFFGSLANHPPATPVVSVALKA"
     gene            complement(2697..3203)
                     /locus_tag="VKX24_00120"
     CDS             complement(2697..3203)
                     /locus_tag="VKX24_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009153013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HLJ06913.1"
                     /translation="MSSPNGSGRGRWTPPSARERWEIIRRTKSVAMVGASSNPARPSY
                     FVATYLLSSSCSFENLWFVNPVADEILGRPVYKSLADLPGPPDLVDVFRKPADLPEVA
                     EEAIAAGAKTLWLQLGLWDEAVAQTAYDAGLDVVMNRCLKIEHARWAGGLHLAGFDTG
                     VISSRRVV"
     gene            complement(3200..>3560)
                     /locus_tag="VKX24_00125"
     CDS             complement(3200..>3560)
                     /locus_tag="VKX24_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009074425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HLJ06914.1"
                     /translation="HPAVAWVAFAGLSSSPFHALARRYLPRGPGAVFSFGVRGGRRAG
                     EAFVESTELASHLANIGDTRTLVIHPASTTHQQLSDEALRACGVSPDLIRISIGIEDV
                     DDILYDLDQALHKAVMA"
BASE COUNT          486 a         1309 c         1281 g          484 t
ORIGIN      
        1 atctcgcgct tggccgacgt cttcgacgtg cgggactccc ggaaccaggg gtgcttcgag
       61 ctggtgtggt tggggacgag gtcgagcacc accctgatgt cccgccgccc ggcctcggcc
      121 accagccggt cgaagcgctc gaggtcgccg aggacgggct gcaccgccgt gtaatgggcg
      181 acgtcgtacc cccagtcggt gtcgggcgag acggtgatcg gcgtgatcca gatggcgtcg
      241 acaccgagcc aggcgaggtg gtcgagccgt tcggtgatgc cggcgaggtc gccgacgccg
      301 tcgccgtcgg agtcccggta ggaccgggga tagatctggt agatgacggc gttgcgccac
      361 cacgtcacgg gccaatcctc ccgagggggt cggccgccga ggttacccac ccgaccggac
      421 tagtcccgga ccggcgggga accaggaaac gtcccgggcc ggagtcccaa cccggcgcga
      481 tccgggcaac ggtgccccga cacctaacgc cccggcgggc ggcaaccgag aaatgaagtg
      541 ggtggcgcac gaggcgccgc cgccacagct cggggtgcgg ggttcccgca aagaggattc
      601 caggaagggt ttcatggttc gcgctcgttc gcgcctggcg ctcgccgccg cgctcatggc
      661 ggccctcgcc ggtgggttcg gcccgctggc ggcggcggcc acggccgccc cggcgggatc
      721 cggcggcacc gggcccgacc cccgcctggc cgaactggcg tcgccatcgg ccttccgggg
      781 cctgctctac accgggctca gcctgggccg gagcggttcg gcctgcgccg gcgccttcga
      841 ggccaagagc cgggcgggcg cttccctcgg ctgctcgcac ggccccgacc ccgctccgcc
      901 gggcaccgac gtccgccggg gccgcagcga cgggcaggtg gcggccgaca ccgccggggc
      961 ccgcaccgcc gacgccgccg gcacgaccga ggagctcggc agcatcggct gcatcgccga
     1021 cggcgtctcc ggcgaccggg tccaggcgat ctacgccgtc cctgccgacc gccccgaccg
     1081 ctcggccacc gtcgtccccg ccatccgctc gacctacgcc ccccgcgtcg actggcagtt
     1141 caaccagtcg gcggccgaga ccggcggcgt ggcccacccg cagttcgtca ccgagcccga
     1201 cgccgccggc accggttgcc ggctgtcggt ggcggtggtc cacctcagcg cggcaggcga
     1261 cgactccttc tccaacacga cgtcggagct caaggcgctc ggctacaacc gcgccgaccg
     1321 gaagtacctg gtgtggatgg actccgacgt cctgtgcggg atcgggagcc tctacgccga
     1381 cacccggccg gggctcagca acctcaacaa cggctacgcc gccatgttcg cccgggtcga
     1441 ctccgcctgc tggaactacg ccgaagggca cgagctgatg cacacgctcg gggccgtgca
     1501 gcagggcgcg ccgcacgcca ccatcaacgg gcactgcttc gacgagcccg acgagatgtg
     1561 ttacgacgac ggcagcggcg tcgccatgat caccgtctgc accggccgca acgacgccct
     1621 gttcgactgc aaccacgacg actactacta cgccggcacc ccgccggcgc tgaactggct
     1681 ggccacccac tggaacacct ggaacagcag ctggctggtg cgggcgccgc tgtcggcggt
     1741 ggccaccggg tcgccaccga cgtcgggttc gaccggatcg acggggtcga ccgcctcgag
     1801 cgggtccagc ggccagtcga cgaccggcgg caccggcatc gccgtcctgc cgccggtcgg
     1861 cggttcgggg ccgcggcagg cctcctcggg ctactggatg ctcacggccg acggccacgt
     1921 caaccccttc ggcgatgccg ccttcttcgg ccagcccttc ccgctggccg ccggggtcac
     1981 ggcggtgcac ctggagccca ccccgtccgg cgccggctac tgggtcctcg acaccaccgg
     2041 caaggtccgg gcctacgggg acgccgtctg gttcggcaac gtcggggccg gcacgatgct
     2101 gccgggcgag cgggccgtcg gcctctcggc cacgccgagc ggcgccggct actgggtgtt
     2161 cacctcccgg ggccgggcgg tgcccttcgg cgacgccggc ttcttcggcg acacctcggg
     2221 cctcccgctc aaccggccgg tgatcgggtc ggtggccacc ccgaccggcc acggctactg
     2281 gatcttcgcc tccgacggcg gcatcttcac cttcggcgac gccgccttct tcgggtcgac
     2341 gggttcgctg cggctgaacc agccggtggt ggccatggct gcctcgccga ccaacggcgg
     2401 ctactggctg gtcggcgccg acggaggcct gttcgccttc ggcgacgccg ggttcttcgg
     2461 gtcgatgggc ggcgtccacc tcaaccggcc ggtgtcggcc gtggtccccg gagcgtccgg
     2521 ctacctcatg gtgggccagg acggcggcgc gttctccttc ggcgacgtgt cgttcttcgg
     2581 ctccctggcc aaccacccgc cggcgacgcc ggtggtctcg gtggcgctca aggcctgaaa
     2641 cggcgttttg gagggcgtgg cgcaccgcca cggtgcgcca cacgctccaa aagcgctcag
     2701 acgacccgcc gggagctgat caccccggtg tcgaagccgg ccaggtggag cccgccggcc
     2761 cagcgggcgt gctcgatctt gaggcagcgg ttcatgacga cgtcgaggcc ggcgtcgtag
     2821 gccgtctggg ccaccgcctc gtcccacagg ccgagctgga gccacagcgt tttggccccg
     2881 gcggcgatgg cctcctcggc cacctcgggc aggtcggccg gcttgcggaa gacgtcgacg
     2941 aggtcgggcg gcccgggcag gtcggccagg ctcttgtaca ccggccggcc gaggatctcg
     3001 tcggccaccg ggttgacgaa ccagaggttc tcgaacgagc agctcgagct gagcagatag
     3061 gtggccacga agtagctcgg ccgggcggga ttggacgacg ccccgaccat ggccaccgac
     3121 ttcgtgcggc ggatgatctc ccaccgctcc cgggccgacg gaggggtcca gcggccgcgg
     3181 ccggaaccgt tgggggagct catgccatca ccgccttgtg gagggcctgg tcgaggtcgt
     3241 agaggatgtc gtcgacgtcc tcgatgccga tcgagatgcg gatgaggtcg ggcgagacgc
     3301 cgcaggcccg aagcgcctcg tcggacagct gctggtgcgt cgtcgacgcc ggatggatga
     3361 cgagggtgcg ggtgtcgccg atgttggcca gatggctcgc cagctcggtg gactccacga
     3421 aggcctcccc ggcgcgccgg ccgcccctca cgccgaagga gaacaccgcc cccggaccac
     3481 gcgggaggta ccggcgggcg agcgcgtgga acggcgacga ggagagaccc gcgaacgcga
     3541 cccaggccac cgccggatgg
//
LOCUS       DATGJT010000007         3134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_933966, whole genome shotgun sequence.
ACCESSION   DATGJT010000007 DATGJT010000000
VERSION     DATGJT010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933966"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1021)
                     /locus_tag="VKX24_00130"
     CDS             complement(<1..1021)
                     /locus_tag="VKX24_00130"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HLJ06915.1"
                     /translation="MDRPVVKTTAGAVRGTVDGGVEVFKGVPYGAPTGGGRRFLPPAP
                     PEPWTGDLDCVRVGPACPQPTLAGSGPVAEQIAALFAGPGGPFVDTQGEDCLTLNLWT
                     PSSGNGGSEPRPVMVWFHGGGWTMGSANSPMYDGAALAQRGDVVVVGVNHRLGALGYL
                     SLAEAFGAEVAASGSAGALDMVAALEWVRDNVAAFGGDPGNVTIFGESGGGAKVSVLL
                     GAPAAAGLVHRAIIQSGPMLRGIEPEKGSATARAVFDRLGAKTLDELRVIPASRLVEV
                     QTAVIGGPLGGFGSGHALGPVVDGGFLPAHPFDPAAAPTAAAVPLLIGTTRDEMTLFT
                     SAIPGF"
     gene            1142..2302
                     /locus_tag="VKX24_00135"
     CDS             1142..2302
                     /locus_tag="VKX24_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015795247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HLJ06916.1"
                     /translation="MPAKPFVPPARPTFPPDDRAAIAKLVEESLAGGSLTLGPNTERF
                     EAAFAARHQVPHAVAVTSGTAALEIALRALAAPDGSPRGLAGRTVVVPANTFFATAAA
                     VVHAGGVPVLADVDPATFTLSPATVEPVLDDRCAGVVIVHIGGFVSPDTGVLADLCRA
                     RGLFLLEDAAHAHGAAFAGRPAGSIGDAGAFSFYPTKVITSGEGGMITGAGEHLRDEA
                     RIYRDQGKAGFLGGDHVRLGYAWRMSELHAAVGLVQLSRLDEFLAVRRRIARLYDEAL
                     GGIPGITPVLAPEGSEPNYYKYLAVLDEGIDRAEVKKALREEHAVGLSGEVYASPLHR
                     QPVFADLGRGPLPVAEDLCARHVCLPVHNDMADSEAEQVLDGLGAVLSRVAG"
     gene            complement(2283..>3134)
                     /locus_tag="VKX24_00140"
     CDS             complement(2283..>3134)
                     /locus_tag="VKX24_00140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06917.1"
                     /translation="AALLLLGVAAWRRDRPGWAALFCGLGQATHPAVVAPIAAVAVAL
                     RLPFEAPPDRVRLLRWYGLSLLPVIPAAWLVVRSPVFEDSSTAVKVANFLTTLLPRCL
                     VLVIPAGLVLLGLYARRRAGRAAWTGPAAFAATAALLAVVWRPLLLPEASGALWRKPD
                     RAMLSFVESPGFRPGATYRVLRVTDFKVSLYQLIRAGGRLDSEFFPESIVRRRWGSDT
                     LYGDFLRRRHVDYVMIWGHYGRVFHTDDEQRLVDLEACPPAAPVCSRRVAANDRWRLW
                     SVTPRPG"
BASE COUNT          432 a         1212 c         1135 g          355 t
ORIGIN      
        1 ggaagccggg aatggccgac gtgaacagcg tcatctcgtc gcgggtggtg ccgatgagaa
       61 gcggcacggc ggcggcggtc ggggcggcgg ccggatcgaa cgggtgcgct ggcagaaacc
      121 cgccgtccac gaccggaccg agggcgtggc cggacccgaa accgccgagc gggccgccga
      181 tcaccgcggt ctgcacctcg accagccggg acgccgggat tacgcgcagt tcgtcgagcg
      241 tcttggcccc cagccggtcg aacaccgccc gggcggtggc cgagcccttc tccggctcga
      301 tgccccgcag catcggcccg ctctggatga tcgcccggtg gacgagcccg gcggccgccg
      361 gcgccccgag caggacgctg accttggcac cgccccccga ctcgccgaag atcgtcacgt
      421 tgccgggatc gccgccgaag gcggcgacgt tgtcccgcac ccattccagg gcggccacca
      481 tgtcgagcgc cccggccgac cccgaggccg ccacctcggc cccgaaggcc tcggccagcg
      541 acaggtagcc cagcgccccg agccggtggt tgacgccgac caccaccacg tcgccccgct
      601 gggccagggc ggcgccgtcg tacatcggcg aattggccga ccccatcgtc cagccgccgc
      661 cgtggaacca caccatgacc ggccggggct ccgacccgcc gttgcccgac gacggcgtcc
      721 acaggttgag ggtgaggcag tcctcgccct gggtatcgac gaacggcccg ccggggccgg
      781 cgaagagggc ggcgatctgc tcggccaccg ggccgctgcc ggccagggtg ggctgggggc
      841 aggcggggcc gaccctgacg cagtcgaggt cgccggtcca cggctcgggc ggcgccggcg
      901 gcaggaaccg tcgcccaccg ccggtcgggg cgccgtaggg cactcccttg aacacctcga
      961 ccccgccgtc gaccgtgccc cgcaccgctc ccgccgtcgt cttcaccacc ggtcggtcca
     1021 tgccgcccag cgtaggggcc gaccccgccg gccctggacg ccggatctcg gcaggaaaac
     1081 ccgcggaatc cgcggttttc cctgccgaga atggagggag gccccggtag agtccggcgc
     1141 cgtgcctgcc aagccgttcg tgccccccgc ccggcccacg ttcccgccgg acgaccgggc
     1201 cgccatcgcc aagctggtcg aggagtcgct ggccggcggg tcgctcacgc tcgggccgaa
     1261 caccgagcgc ttcgaggcgg ccttcgccgc ccgccaccag gtcccgcatg ccgtggccgt
     1321 gaccagcggc acggccgccc tggagatcgc cctccgggcc ctggccgctc cggacggctc
     1381 gccccggggc ctggccggcc ggacggtggt cgtcccggcc aacacgttct tcgccaccgc
     1441 ggcggcggtg gtccacgccg gcggcgtccc cgtcctggcc gacgtcgacc cggcgacgtt
     1501 cacgctctcg cccgccaccg tcgagcccgt cctcgacgat cgctgcgccg gcgtcgtgat
     1561 cgtgcacatc gggggcttcg tgagccccga caccggcgtc ctcgccgacc tgtgccgggc
     1621 ccggggcctg ttcctgctgg aggacgccgc ccacgcccac ggcgccgcct ttgccggccg
     1681 cccggcgggc tcgatcggcg acgccggggc cttctccttc tatcccacca aggtcatcac
     1741 ctccggcgag ggcggcatga tcaccggtgc cggtgagcac ctgcgggacg aggcccgcat
     1801 ctatcgcgac caggggaagg ccgggttcct cggcggcgac cacgtccggc tcggctacgc
     1861 ctggcggatg agcgagctcc acgccgccgt cggcctggtg cagctctccc ggctcgacga
     1921 gttcctggcc gtacgccgcc ggatcgcccg cctctacgac gaggcgctgg gcgggatccc
     1981 cggcatcacg ccggtgctgg cgcccgaggg cagcgagccg aactactaca agtacctcgc
     2041 cgtcctcgac gaggggatcg accgggccga ggtcaagaag gcgctccggg aggagcacgc
     2101 cgtcgggctc tccggcgagg tctacgcctc gccgctgcac cgccagccgg tcttcgccga
     2161 tctcggccgc ggcccgctgc cggtcgccga ggacctctgc gcccgccacg tctgcctccc
     2221 cgtccacaac gacatggccg acagcgaggc cgaacaggtg ctcgacggcc tgggggcggt
     2281 gctcagccgg gtcgcggggt aacggaccac agccgccagc ggtcgttggc ggccactcgg
     2341 cggctgcaga cgggcgccgc cggcgggcag gcctcgagat cgacgagacg ctgctcgtcg
     2401 tcggtgtgga agacccggcc gtagtggccc cagatcatca cgtagtcgac gtggcggcgg
     2461 cggaggaagt cgccgtagag ggtgtcggag ccccagcggc ggcggacgat gctctcggga
     2521 aagaactcgg agtcgagccg tccgccagcc cggatgagct ggtagagcga caccttgaag
     2581 tcggtcaccc ggaggacccg gtaggtggcc ccgggccgga agcccggcga ctcgacgaag
     2641 ctgagcatgg cccggtcggg cttgcgccac aacgctcccg acgcctcggg gagcagcagc
     2701 ggccgccaca cgacggccag cagggcggcg gtggcggcga aggccgccgg gcccgtccag
     2761 gcggcgcgtc cggcccgccg ccgggcgtag agcccgagca gcaccaggcc ggccgggatc
     2821 acgagcacga ggcaccgggg gagcagcgtg gtgaggaagt tggccacctt cacggccgtc
     2881 gagctgtcct cgaacaccgg cgagcgcacc accagccagg cggcggggat caccggcagc
     2941 agcgacagcc cgtaccaccg caggagccgc acccgatcgg gcggcgcctc gaacggcagc
     3001 cgcagcgcga ccgccacggc ggcgatgggt gccaccaccg ccgggtgcgt ggcctggccg
     3061 aggccgcaga acagcgccgc ccacccgggc cggtcgcgcc gccaagcggc cacgccgagc
     3121 agtagcagcg ccgc
//
LOCUS       DATGJT010000008         5368 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_311519, whole genome shotgun sequence.
ACCESSION   DATGJT010000008 DATGJT010000000
VERSION     DATGJT010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5368
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311519"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..881)
                     /locus_tag="VKX24_00145"
     CDS             complement(45..881)
                     /locus_tag="VKX24_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018534305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ06918.1"
                     /translation="MTHRRPRLAQPLPLGRGRVLDVAKVSVSFGAVRALDNVSLSVRD
                     GEFVGLIGPNGAGKTTFFNVVSGFVRPSAGRIRLGGRRIDTWTPAERARRGIARTFQN
                     IGLDKGATVADNLRVARDGGPLWGELRQSFGSAAAAAERLEARAGELLDRLSLGDVLG
                     ERVETLPVGTAKLVELVAVLLRRPRLLLLDEPASGIGAAERGRLGRLLRELHREEGLS
                     VLMIEHDMALAMGTVDYLYVLDFGTLLAEGRPDEVRRDPRVIEAYLGRTEAGTTAEAV
                     AT"
     gene            complement(878..1201)
                     /locus_tag="VKX24_00150"
     CDS             complement(878..1201)
                     /locus_tag="VKX24_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06919.1"
                     /translation="MKFRRSLLGWLLVAAGLVAVIAGWSSVQSTRDVPVQVAYLASGG
                     LIGVALVILGVGLVGGDDLHAIRAAVEELRDRFDDLEFDLADSRGHLDGSASRQDGTR
                     TRSSV"
     gene            complement(1198..2304)
                     /locus_tag="VKX24_00155"
     CDS             complement(1198..2304)
                     /locus_tag="VKX24_00155"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ06920.1"
                     /translation="MTTDAIALPGEVASDRAAEVAVAGPPALRRPPLANATFMRALLV
                     VGLVAPFVCARAFSEFTDTVLVQVMIAAITVAGLHLLVHWTGQISLAQVAFMGVGAMV
                     TARANADFSVPLPAAILLGVAGAVVASLVIGLPALRIRGLALAIITLAFGFAATRWLF
                     LRPWLAPLAAGLPIHDRHLFGFDVTQSRQLIIPIGVIGVAVIALTTRLGSSPVGRALR
                     MVASDEEVASASGIGVAGHKLFAFLYAGACAGLAGAFTVVSIGRVGPGAFPVSRSVLY
                     LGAVLFGGPGPLVGPLQAAAGFAAFPVIFRSLGRYVDLIGPLSILLVVTVSPAGINGV
                     AHMAETAVARRLHRHRPPSPNGTGSTAELEGDAP"
     gene            complement(2301..2729)
                     /locus_tag="VKX24_00160"
     CDS             complement(2301..2729)
                     /locus_tag="VKX24_00160"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06921.1"
                     /translation="MAALVLALVFFIAFRVSNVALLFRASATDPYAATLMGVDVARLD
                     FATWTLAGALAGLAAVLVAPLVGFDVFFMTLLAIRGFAASLLAGLTNLPGTLAAGLAL
                     GIAEAALTRHTTQPGAPEAVLVVLIVAFLFRPQATQRATA"
     gene            2776..3063
                     /locus_tag="VKX24_00165"
     CDS             2776..3063
                     /locus_tag="VKX24_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06922.1"
                     /translation="MPAGQRRRHVVLVGAPDLVGDERQDAGHGQCPDQHGQRVGPPAG
                     QQEERRRPEGGGHGHPDAGGEQIGLVPFGGEGVEDEGAEHPRLAVGEVEHP"
     gene            complement(3324..4832)
                     /locus_tag="VKX24_00170"
     CDS             complement(3324..4832)
                     /locus_tag="VKX24_00170"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLJ06923.1"
                     /translation="MTPPLPQLKGPWTSGRAEDAFDVFDPATGEVVATVEGGGAAEVD
                     AAVRRACSAFESGWRDVPARERGRLLFECARVVRRHADDLAALETLEMGKPYAQARRF
                     DVEFCIASFEFYGGLADKVPGHAFDLGPVAAHTVHEPYGVVGGIIPFNWPPIHTAAKS
                     APALAAGNAVVLKPPEQDPLTIMRIVELLEGVLPADVLQVVPGSGPEAGTALAGHPLV
                     ERLSFTGSTATGRAVLKLAADAMTPATLELGGKNPLLVFADADLDAALRGALEGAFFN
                     QGEACTAASRLLVEAPVHDEFVGRLATAARRLRVGDGRDPATHVGPLISAAQQRRVLD
                     HIDRAIAEGATVAARAPLPDDPRLAGGYWVAPTVFTDVTPTMAIARDEVFGPVTAVLP
                     FAGDAEALALANDTPYGLVAAVYSADAARARRVARRINAGVVMVNNYSRAFLGTPFGG
                     YGDSGYGREHAIESLLEFTRTKNIREPSGLGAVPEWDALADLLTVDNSRRLS"
     gene            complement(4829..>5368)
                     /locus_tag="VKX24_00175"
     CDS             complement(4829..>5368)
                     /locus_tag="VKX24_00175"
                     /EC_number="6.2.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011292668.1"
                     /note="AcsA; in Sinorhizobium meliloti this enzyme is
                     required for acetoacetate activation; similar to
                     acetyl-CoA synthase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HLJ06924.1"
                     /translation="EDGRRYREAYFEMFPGVWRHGDWLELTPRGGGILYGRSDATINR
                     GGVRMGSAEIYRAVLTLPEVTDALVCDLPGDDGVDVMPLFVVLAEGATLDDELADRIR
                     RTIRTEVSPRHVPDRVFAVPELPRTLTGKTLEIPVKRLLQGAEIDRVASRDSLANPAA
                     LEWFEQSRKAIVDELKATS"
BASE COUNT          782 a         1879 c         2084 g          623 t
ORIGIN      
        1 ggcgccgtag cggctccagg cgacccgggc ctcgaggcgg gcggtcacgt cgccaccgcc
       61 tcggcggtcg ttcccgcctc cgtgcggccg aggtaggcct cgatgacgcg gggatcccgg
      121 cgcacctcgt cgggccgtcc ctcggccagc agcgttccga agtcgaggac gtagaggtag
      181 tccaccgtcc ccatggccag ggccatgtcg tgctcgatca tgaggaccga caggccctcc
      241 tcccggtgca gctcccgcag gagccggccc agccgccccc gctcggcggc gccgatgccc
      301 gaggccggtt cgtcgagcag cagcaggcgg ggccggcgga gcaggacggc gacgagctcg
      361 acgagcttcg ccgttcccac cggcagcgtc tcgacccgtt cgccgaggac gtcaccgagg
      421 ctcagccggt cgagcagttc tccggcgcgg gcctcgaggc gttcggcggc cgccgcggcg
      481 gagccgaacg actggcgcag ctcgccccac agcggcccgc cgtcgcgggc cacgcggagg
      541 ttgtcggcca cggtggcgcc cttgtcgagg ccgatgttct ggaacgtgcg ggcgatgccc
      601 cgccgggccc gctcggccgg cgtccacgtg tcgatccggc gcccgccgag gcggatccgc
      661 ccggccgagg ggcggacgaa cccgctcacc acgttgaaga acgtcgtctt gccggcgccg
      721 ttgggcccga tgagcccgac gaactcgccg tcgcgcacgg agaggctgac gttgtcgagg
      781 gcccggacgg cgccgaagga gacgctgacc ttggccacgt cgagcacccg gccccgcccg
      841 agcggcaggg gttgggccag ccggggccgg cggtgggtca cacggagctc cgcgtccggg
      901 tgccgtcctg ccgggaggcg gagccgtcga ggtgtccccg ggagtcggcg aggtcgaact
      961 cgaggtcgtc gaagcggtcc cgcagctcct cgaccgcggc ccggatggcg tggaggtcgt
     1021 cgcccccgac caggcccacg ccgaggatca ccagcgccac tccgatcaga ccgccgctgg
     1081 ccaggtaggc gacttggacg gggacgtcgc gggtggactg cacgctcgac cagccggcga
     1141 tgacggcgac gagcccggcc gccacgagga gccaaccgag caggctgcgg cgaaacttca
     1201 cggggcgtct ccttcgagtt cagcggtgga acccgtcccg ttcggggacg ggggacggtg
     1261 gcggtggagc cggcgggcga cggcggtctc ggccatgtgg gccacgccgt tgatcccggc
     1321 cggcgagacg gtgacgacga gcaggatcga cagcggcccg atgaggtcga cgtagcggcc
     1381 gaggctccgg aagatcaccg ggaaggcggc gaacccggcg gcggcctgga gcgggccgac
     1441 cagcggcccg ggcccgccga agaggacggc gccgaggtac aggacggacc ggctgaccgg
     1501 gaaggccccg gggccgaccc ggccgatgga gacgacggtg aaggcgccgg ccagcccggc
     1561 gcaggcgccg gcgtagagga aggcgaagag cttgtggccg gccacgccga tgccgctggc
     1621 ggaggccacc tcctcgtcgc tggccaccat ccgcaaggcc cgcccgaccg ggctcgaccc
     1681 gagccgggtg gtgagggcga tgacggcgac gccgatcacg ccgatgggaa tgatcagctg
     1741 ccggctctgg gtgacgtcga agccgaacag gtgccggtcg tggatcggca gccccgccgc
     1801 cagcggcgcc agccagggcc ggaggaacag ccagcgggtg gcggcgaacc cgaaggccag
     1861 ggtgatgatg gccagggcca gcccccggat ccgaagcgcc ggaaggccga tgacgaggct
     1921 ggccaccacg gcgccggcca cgccgaggag gatggccgcc ggcagcggga ccgagaagtc
     1981 ggcgttggcc cgggccgtca ccatggcccc cacgcccatg aacgccacct gggccaggga
     2041 gatctggccc gtccagtgga cgagcaggtg gagccccgcg acggtgatgg cggcgatcat
     2101 cacctggacg agcacggtgt cggtgaactc ggagaaggcc cgggcgcaga cgaagggggc
     2161 cacgagcccg acgaccagca gcgcccgcat gaaggtggcg ttcgccagcg gtggacggcg
     2221 gagcgccggc ggccctgcga cggcgacctc ggccgcacgg tcagaggcga cctcgccggg
     2281 aagggcgatg gcgtcggtgg tcatgccgtc gcccgctgcg tggcctgggg gcggaagagg
     2341 aaggcgacga tgaggaccac cagcaccgct tccggcgccc cgggctgggt cgtgtgccgc
     2401 gtgagcgcgg cctcggcgat ccccagcgcc agcccggcgg ccagcgtgcc cgggaggttg
     2461 gtgaggccgg ccagcaggga ggcggcgaag ccccggatgg ccagcagcgt catgaagaag
     2521 acgtcgaagc cgacgagcgg ggcgaccagc accgcggcca ggccggccag ggcaccggcc
     2581 agcgtccagg tggcgaagtc gaggcgggcc acgtcgacgc ccatcagcgt ggcggcgtac
     2641 gggtcggtgg cgctggcccg gaacagcagc gccacgttgc tgacgcggaa ggcgatgaag
     2701 aacaccagcg ccagcacgag ggcggccatg aggaccagca ggcgggccga tgaagcgcag
     2761 gccgaggatc gagacgtgcc agccggccag cggcggcggc acgtagtgct ggtcggtgcc
     2821 ccagatctcg tcggcgacga acgtcaggac gccggccacg gccagtgtcc cgaccagcat
     2881 ggccagcggg tcggtccgcc ggcgggccag caggaggaac gtcgccgccc cgagggcggc
     2941 ggacacggcc accccgacgc cggcggcgag cagatagggc ttgtgccctt cggcggagag
     3001 ggcgtagaag acgaaggcgc cgaacatccc cgtctcgccg tgggcgaagt tgagcaccct
     3061 tgacttcttg tagatcaggg tgatgcccag cgccacaaga ccgtagatcg acccgatgac
     3121 caggccgttg gcgaggatgg tcttcatcgg ccgtgaccgt agtgtggagt ccgttgccgc
     3181 tctggcggcg tcacgacact gcggatgtca cggccgttac agagtcgcgg cggcgcgacg
     3241 gcgcgccaca cggacccgct gtgcccgctc atcgttgccc ctctcgctcc cctggagggg
     3301 tgcgttctct cccgccggga agattacgag aggcgtcggg aattgtcgac agtcaggagg
     3361 tcggccaggg cgtcccactc cggaacggcg ccgagccccg acggctcccg gatgttcttc
     3421 gtgcgggtga actccagcag gctctcgatg gcgtgctccc ggccgtagcc ggagtcgcca
     3481 tagccgccga agggcgtgcc gaggaaggcc cggctgtagt tgttgaccat gacgacaccg
     3541 gcgttgatgc gccgggccac ccgccgggcc cgggcggcgt cggcggagta gacggcggcc
     3601 acgaggccgt agggcgtgtc gttggccagg gccagcgcct cggcatcgcc ggcgaagggc
     3661 agcaccgccg tcaccgggcc gaagacctcg tcccgggcga tggccatcgt cggtgtcaca
     3721 tcggtgaaga cggtcggcgc cacccagtag ccgccggcca ggcgcgggtc gtcgggcagc
     3781 ggcgctcggg ccgccacggt cgccccttcg gcgatggccc ggtcgatgtg gtcgagcacc
     3841 cggcgctgct gggcggcgct gatcagcggg ccgacgtggg tggcggggtc gcggccgtcg
     3901 ccgacgcgga gccgccgcgc cgccgtcgcc agccggccga cgaactcgtc gtggacgggc
     3961 gcctccacca gcagccggga ggcggcggtg caggcctcgc cctggttgaa gaaggcgccc
     4021 tccagcgccc cccgcagggc ggcgtcgagg tcggcgtcgg cgaagaccag cagcgggttc
     4081 ttgccgccga gctcgagcgt ggccggggtc atggcgtcgg cggccagctt gaggacggcc
     4141 cggccggtgg ccgtcgaacc ggtgaacgac agccgctcga cgaggggatg cccggccagc
     4201 gccgttccgg cctcggggcc cgagccgggc acgacctgga ggacgtcggc cggcagcacg
     4261 ccctccagca gctccacgat ccgcatgatc gtgagcgggt cctgctccgg cggcttgagg
     4321 acgacggcgt tgccggcggc cagcgccggc gcgctcttgg ccgcggtgtg gatcggcggc
     4381 cagttgaacg ggatgatccc gccgaccacg ccgtagggct cgtgcacggt gtgggccgcc
     4441 accggcccga ggtcgaaggc gtgcccgggc accttgtcgg ccagcccgcc gtagaactcg
     4501 aacgaggcga tgcagaactc gacgtcgaag cgccgggcct gggcgtaggg cttccccatc
     4561 tccagcgtct ccagcgcggc gagatcgtcg gcgtggcggc ggacgacccg ggcgcactcg
     4621 aacagcagcc ggccccgctc ccgggccggc acgtcccgcc agccggactc gaatgccgag
     4681 caggcccggc ggacggcggc gtcgacctcg gccgccccgc cgccctccac cgtggccacg
     4741 acctcgcccg tcgccgggtc gaacacgtcg aaggcgtcct cggcccggcc cgacgtccac
     4801 ggtcccttga gctggggcag cggcggcgtc acgaggtcgc cttcagctcg tcgacgatcg
     4861 ccttgcggga ctgctcgaac cattccagcg ccgcggggtt ggccaggctg tcgcggctgg
     4921 ccacccggtc gatctcggcg ccctgcagca atcgcttgac ggggatctcc agcgtcttgc
     4981 cggtcagcgt gcggggcagc tcgggaacgg cgaagacccg gtcggggacg tggcggggcg
     5041 agacctcggt gcggatggtg cgccggatcc ggtcggccag ttcgtcgtcg agggtggcgc
     5101 cctcggccag cacgacgaac agcggcatga cgtcgacgcc gtcgtcgccg ggcaggtcgc
     5161 agacgagggc gtcggtgacc tcgggcagcg tgagcaccgc ccggtagatc tcggccgagc
     5221 ccatgcggac gccgccccgg ttgatggtgg cgtcgctgcg gccgtagagg atgccgccgc
     5281 cccggggggt gagctccagc cagtcgccgt ggcgccacac gccggggaac atctcgaagt
     5341 acgcctcccg gtagcggcgg ccgtcctc
//
LOCUS       DATGJT010000009         2745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_311606, whole genome shotgun sequence.
ACCESSION   DATGJT010000009 DATGJT010000000
VERSION     DATGJT010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2745
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311606"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..827
                     /locus_tag="VKX24_00180"
     CDS             48..827
                     /locus_tag="VKX24_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06925.1"
                     /translation="MTNPLALAVQHKLIAIAVVGCLGGGGAAVVITTSLPSPPPVLAP
                     ASAASAVPVQAAGTNAGGSTGGSGGAPSGAGGAGGASGTAGSAGEATVSSPPAATSTG
                     SHVAAAAPASTQAKATTTPAKSGSAGTPSGGAPASSAAPSLPTSAPSAVSCPTNQRLT
                     DAEIKWLLSEVSKTASANPSVAPGAATIKAQLTPLLGQNECAAQAQPVVTGLCSGSAT
                     RQTINAMASQMPFLVKLVVGNPCSDNLASLLPTLSSYTSLL"
     gene            964..>2745
                     /locus_tag="VKX24_00185"
     CDS             964..>2745
                     /locus_tag="VKX24_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06926.1"
                     /translation="MTIEASALAGATKAAGRASRRVFGPSSERPFRRRATDWNRLVIA
                     GLLLAATAYHAGHPSSVERNVFSLVNGLPGGIGPLFRVWYQLATAWAIALVVAAALLA
                     RRWRLAFDLAVAGTAAWVVGHLLGRELPDTIGAGVQVVHRLPSTPRFPFVPLAVLAAV
                     VAAAAPYLSRPARRLGQAVLVVLVPAGAYLGIAYPNDIVGALTLGWGLAAAVHLLFGS
                     PAGRPTPEHVAATLEELAVPVTGVRLAERQPEGATLLDAADEHGPIRIKVLGRDAGEA
                     QLLTKLARAVLYKDSGRQLNLTRGQEIEHEAYMLLRAAAAGVTVPEVVVAGVAGPGAA
                     VLATREPQGIPLADLSAASISDGELEQVWHQLEALHTARIVHGRANVHSVLHTPSGPA
                     LTSFELAQATGPGMQPGTDVAELLTSTAMSVGVDRAVAAAMAGAGPAAVIEALPLLEA
                     AALSRATRDRSPNRKELRELLGTLRTKAAAAAGTTPPKLEELHRVRPVNLVLAVGTML
                     AAGGLLAAVGSPHRLWTAVGRAEWAWVAAAFALSLATNLPQALGLMGTVPKRLPLWPT
                     TELCVAQSFSSVAVPLGSTAMRVRFLQH"
BASE COUNT          347 a         1089 c          951 g          358 t
ORIGIN      
        1 aaccaaaggg acacacccgg aaccgccccc ccgcaaagga cacccccatg accaaccctc
       61 tcgcgcttgc cgtgcaacac aagttgattg cgatcgccgt cgtcggttgc ctcggcggcg
      121 gcggcgccgc agtggtgatc acgacctccc tgccgtcgcc ccctcccgtg ctggctccgg
      181 catcggccgc cagcgcggtg cccgtccaag cggcggggac caatgccgga ggctcaaccg
      241 gtgggtcagg cggggctccc agcggggccg gcggggccgg cggagccagc gggactgccg
      301 ggtcggccgg cgaggccacc gtttcgtctc cgccggcagc cacctcgacg ggtagccatg
      361 tcgccgccgc ggctccggcc tccacccagg ccaaggcgac caccaccccg gccaagagcg
      421 ggtccgccgg cacgccgtca ggcggggccc cggccagctc cgccgctccg tcgctgccaa
      481 cctcggcgcc ctcggccgtc tcctgcccga ccaaccagcg gctgaccgac gccgagatca
      541 agtggctcct gagcgaggtg tccaagaccg cgtcggcgaa cccgtcggtg gcccccggtg
      601 ccgccaccat caaagcccag ctcacgccgc tgctcggcca gaacgagtgc gcggcccagg
      661 cccagccggt ggtaaccggg ctgtgttccg gatcggcgac ccgccagacg atcaacgcca
      721 tggccagcca gatgccgttc ctggtcaagc tggtcgtcgg gaacccgtgc agcgacaacc
      781 tggccagcct gcttccgacg ctcagctcgt acacctcgct gctctgatgc ctcggtagga
      841 cggccgcaaa ccggatcgcc gagcctgttg gcgatccgag gcgctggcgg ggaggcagcc
      901 ggtaagggaa gatcgcggcg tgagtgccgc ccaaccatcc ctcccccccc gccagccgcc
      961 gcgatgacga tcgaggcgag cgccctggcc ggagcgacca aagccgccgg ccgcgcctcg
     1021 cggcgcgtct tcgggccctc ctcggagcgg ccgttccggc ggcgggcgac cgactggaac
     1081 cggttggtga tcgccggcct gctgcttgcg gccaccgcct accacgccgg ccacccgagc
     1141 agcgtcgagc gcaacgtctt cagcctggtc aacgggctgc ccggagggat cggcccgttg
     1201 ttccgggtct ggtaccagct cgccaccgcc tgggcgatcg ccctggtcgt cgccgccgcc
     1261 ctgctcgccc ggcgctggcg gctggccttc gacctggcgg tggccgggac cgccgcctgg
     1321 gtggtgggcc acctgcttgg ccgcgagctc ccggacacca tcggcgccgg ggtgcaggtc
     1381 gtccaccggc tcccctcgac gccccggttt cccttcgtgc ccctcgccgt cctcgccgcc
     1441 gtcgtggccg ccgccgcgcc ctacctcagc cggccggccc ggcggctcgg ccaggccgtg
     1501 ctggtcgtcc tggtgccggc tggggcctac ctggggatcg cctacccgaa cgacatcgtc
     1561 ggtgcgctga ccctcgggtg ggggctggcg gcggcggtgc acctcctgtt cggctccccc
     1621 gccggccggc cgaccccgga gcacgtcgcc gccacgctgg aggagctggc ggtcccggtg
     1681 accggtgtgc ggctggccga gcggcagccg gaaggggcaa ccctgctcga cgccgcagac
     1741 gagcatggcc cgatccggat caaggtgctc ggccgtgacg ccggcgaagc ccagctgctg
     1801 accaaactcg cccgggccgt cctgtacaag gacagcgggc gccagctgaa cctcacccga
     1861 ggccaggaga tcgagcacga ggcgtacatg ctgctgcgcg cggcggccgc cggggtgacc
     1921 gtcccggagg tggtcgtcgc cggcgtcgcc ggccccggcg cggcggtgct ggcaacccgc
     1981 gaaccgcagg ggatcccgct ggccgacctc tccgccgcgt cgatcagtga cggcgaactg
     2041 gaacaggttt ggcaccagct cgaggccctg catacggccc gtatcgtcca cgggcgggcc
     2101 aacgtccact ccgtgctgca caccccctcg ggccctgccc tgacctcgtt cgagctggcc
     2161 caggccaccg ggccgggcat gcagccaggt accgatgtcg ccgagctgct gacctcgacc
     2221 gccatgtccg tcggcgtcga ccgggcggtg gcggcggcga tggccggtgc cggcccggcg
     2281 gcggtgatcg aggccctccc gctgctggaa gccgccgccc tcagccgcgc cacgcgggac
     2341 cggtcaccga accgcaagga gctgcgcgag ctgctcggca cgctccggac caaggccgcc
     2401 gcggccgccg ggaccacgcc gccgaaactc gaagagctgc accgggtccg cccggtcaac
     2461 cttgtgctgg cggtggggac gatgctcgcc gccggcggcc tcctcgccgc ggtcggcagc
     2521 ccgcaccggc tgtggaccgc ggtcggccgc gccgaatggg cctgggtcgc cgccgccttc
     2581 gccctctcgc tggccaccaa cctgccccag gcgctcggcc tgatgggcac cgtccccaag
     2641 cgcctcccgc tgtggccgac caccgagctg tgcgtcgccc agtcgttctc cagcgtcgcc
     2701 gtcccgttgg gcagcacggc catgcgggtg cgcttcctgc agcac
//
LOCUS       DATGJT010000010         2862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_830490, whole genome shotgun sequence.
ACCESSION   DATGJT010000010 DATGJT010000000
VERSION     DATGJT010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830490"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /gene="folB"
                     /locus_tag="VKX24_00190"
     CDS             <1..561
                     /gene="folB"
                     /locus_tag="VKX24_00190"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HLJ06927.1"
                     /translation="RKNAIAAGLRLPVGERLELTAAAAAWSVAHRAAVVRVHDVKEMV
                     RVARMTEAIRDAGAPAPPPEGTPPRDRVTVRGLRAFGYHGVNEAEKRNGQDFVVDLEA
                     ILDLGPAGRGDDLARTVDYSDLTARATAVIAGERYDLIEALAERLAAVVLEYPGVTGA
                     VVRVAKPAALAGRGVEEVSVQIERHR"
     gene            674..1150
                     /gene="folK"
                     /locus_tag="VKX24_00195"
     CDS             674..1150
                     /gene="folK"
                     /locus_tag="VKX24_00195"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003457237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HLJ06928.1"
                     /translation="MTRAYIGLGTNLGDREGFLRAAVDALVAHDLAPTAVSSVYESAP
                     LGPPQPDYLNAAAEVRTALGARELLEQLKAIEAELGRQHRERWGPREIDLDLLLYGDE
                     TIDEDGLTVPHPELTKRSFVLVPLLEIAPYLDLPSGEPLSAFCERNPEGLRKVGPL"
     gene            1276..1797
                     /locus_tag="VKX24_00200"
     CDS             1276..1797
                     /locus_tag="VKX24_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06929.1"
                     /translation="MAKKKKKRRPQPARGRPAQESPEESTPVAKGPVVITASKAVRIY
                     SGLFGVGFFVLVVLNGLATKKVGLSAVPLLLVLLGAFVCLRIFRTSLVADQRGVTIRN
                     YLKTYRLKWSDVGDFRLDPPVTRLEGWEMSVVRADGKPIRLDALRRPFVRNVESNRPI
                     LEAQRKRLMAWLR"
     gene            1971..>2862
                     /gene="panC"
                     /locus_tag="VKX24_00205"
     CDS             1971..>2862
                     /gene="panC"
                     /locus_tag="VKX24_00205"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015897107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HLJ06930.1"
                     /translation="MKTLTTRQELAAALAAERRGLVPGAPPASRRSIGFVPTMGALHQ
                     GHVSLIEAARAADDVVVVSIFVNPLQFGPTEDFDRYPRDLATDARVAADAGADYLFAP
                     SVAEMYPAGATATRVEVGPIGEGGEGRYRPGFFAGVATVCVKLFSIVGPDRAYFGQKD
                     AQQLAVIRQVVADLNLPLQIVACPTVRETDGLAVSSRNAYLDPEGRRAAPALARALRA
                     AQHAAAAGEDDAAALTGIVAEALAAEPAVRLQYATVFDPETFAELPAVGECGAVLAAA
                     AHVGSTRLIDNVALVVHPAAR"
BASE COUNT          384 a         1083 c         1001 g          394 t
ORIGIN      
        1 cggaagaacg ccatcgccgc cgggctgagg ctgccggtcg gcgagcggct cgagctgacc
       61 gccgccgccg ccgcctggtc ggtcgcccac cgggcggcgg tcgtccgggt ccacgacgtc
      121 aaggagatgg tccgggtcgc ccgcatgacc gaagcgatcc gcgacgccgg ggcgccggcg
      181 ccgcccccag agggcacccc gccgcgggac cgggtcaccg tgcgcggcct ccgggcgttc
      241 ggctaccacg gggtgaacga ggccgagaag cggaacggcc aggacttcgt cgtcgacctg
      301 gaggccatcc tcgacctcgg cccggccggg cgcggcgacg acctcgcccg caccgtcgac
      361 tactccgacc tcactgcccg ggcgacggcg gtcatcgccg gggagcgcta cgacctgatc
      421 gaggccctgg ccgaacgcct ggccgcggtc gtgctggaat atcccggtgt caccggggcg
      481 gtggtccggg tggcgaagcc ggcggcactg gccggccggg gcgtcgagga ggtctccgtg
      541 cagatcgagc ggcaccggtg agcgggttga gcggccccgt gggcgcctcg ctgagcggcc
      601 ccttgggcgg cccgatgggc ggccgggcga gcggcctggt gcgcggcccg atgggcggcc
      661 aggcgagccg gccatgacca gggcctatat cgggctcggg acgaacctgg gcgaccggga
      721 gggcttcctc cgggccgcgg tcgacgccct tgtcgcccac gacctggccc ccaccgccgt
      781 ctcgtcggtg tacgagtcgg cgcccctggg ccccccgcag cccgactacc tgaacgccgc
      841 cgccgaggtg cgcaccgccc tcggcgcccg cgagctgctg gagcaactga aggcgatcga
      901 agcagagctg ggccggcagc accgggaacg ctgggggccg cgggaaatcg acctggacct
      961 gctgctctac ggcgacgaga ccatcgacga ggacggcctc accgtcccgc acccggagct
     1021 gaccaagcgc tcgttcgtgc tggtcccgct gctcgagatc gccccgtacc tcgacctgcc
     1081 ctcgggcgag ccgctctccg ccttctgcga acgcaacccg gaggggctcc gcaaggtcgg
     1141 gccgctgtag ggcgtcccgg tagctcaggc cttccttggg tgaaaacgaa ccataatgat
     1201 cctctatcac ccaaagaacg ctggaagggt ccgccttcac ccggcctgcc cggcccgcgc
     1261 gcgaggatcg acgttgtggc taagaagaag aagaagcgtc gcccgcagcc ggctcggggc
     1321 cggccggccc aggagtcgcc ggaagagtcg accccggtcg ccaagggtcc ggtggtcatc
     1381 accgcgtcga aggccgtccg gatctactcc ggcttgttcg gggtcgggtt cttcgtgctg
     1441 gtggtcctga acggcctcgc cacgaagaag gtcggtctgt cggcggtacc gctgctgctg
     1501 gtgctcctgg gtgccttcgt ctgcctgcgc atcttccgga cgtcgctggt ggccgaccag
     1561 cggggggtga cgatccgcaa ctacctgaag acctaccggc ttaaatggtc cgatgtgggc
     1621 gacttccgcc tcgacccccc ggtgacccgg ctcgaggggt gggagatgtc ggtggtccgg
     1681 gctgacggca agccgatccg cctcgacgcc ctcaggcgcc cgttcgtccg caacgtcgag
     1741 tccaaccgtc cgatcctcga ggcccagcgc aagcgcctga tggcctggct gcgctagccc
     1801 aagcgcgagc ccagcgctgg cccaggccct agcccgaagg ctagccctgg cgctacccga
     1861 tccacccggg ccccgccccg aggcggcaac ggctgcgggg gccgccccgg ctgccgtttc
     1921 gtatacttgg aggtgaccgg tatccccgac acggaactgg atcagcgccc atgaaaaccc
     1981 tcaccacccg gcaggaactc gctgccgccc tcgccgccga gcgccgtgga ctcgtcccgg
     2041 gtgccccccc ggcctcccgc cggagcatcg gcttcgttcc cacgatgggt gccctgcacc
     2101 agggtcacgt ctcgctgatc gaggccgccc gggccgcgga tgacgtcgtc gtggtctcga
     2161 tcttcgtcaa cccgctgcag ttcggcccca cggaggactt cgaccgctac ccccgggacc
     2221 tcgccaccga cgcccgggtc gccgcggacg ccggggccga ctacctcttc gcaccgtccg
     2281 tcgccgagat gtatcccgcc ggggcgaccg ccacccgggt cgaggtcggc ccgatcggcg
     2341 agggaggcga gggccgctac cggccgggat tcttcgccgg cgtcgccacc gtctgcgtca
     2401 agctgttcag catcgtcggt cctgaccgag cctacttcgg gcagaaggac gcccagcagc
     2461 tggcagtgat ccgccaggtc gtcgccgact tgaacctccc gctccagatc gtggcctgcc
     2521 caaccgtccg cgagacggac gggctggcgg tctccagccg caacgcctac ctcgacccgg
     2581 agggccgccg ggccgctccc gcgcttgccc gggcgctgcg agccgcccag cacgccgccg
     2641 ctgctgggga ggacgacgcc gccgcgctga ccgggatcgt cgccgaggcg ctggccgccg
     2701 agcccgcggt ccgcctccag tacgccaccg tcttcgaccc ggagaccttc gccgagctgc
     2761 ccgcggtcgg cgagtgcggt gcggtcctcg ccgccgccgc ccacgtcggg tcgacccggc
     2821 tgatcgacaa tgtcgccctg gtggtccacc cggccgcccg gc
//
LOCUS       DATGJT010000011         2805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_623315, whole genome shotgun sequence.
ACCESSION   DATGJT010000011 DATGJT010000000
VERSION     DATGJT010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623315"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2635
                     /locus_tag="VKX24_00210"
     CDS             <1..2635
                     /locus_tag="VKX24_00210"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06931.1"
                     /translation="WLAPTAVPAGSSPPGTPANRVINVTASPISAGPGTAFSGTVATF
                     TIADPTAVASQFSATVDWGDATTPSPATVTGPTGGPFTVTGTHTYAGAGTFSTSVTID
                     DLTLPAPSGSYQLVATTIDGPNQSGTGSNPLGFATATASCPPATVLVSGGGVVEPASA
                     DVSVHLEGSFPSDASGHPITTSGATPQSWTALSEDGLGDAGNVTTAWALCGSGGPSSS
                     TVALTTVQGPNGAGSTSPPPTGTGFTTVTVSCPTGKTLTGGGVETIPGNLGVAGGQPS
                     PLHVNGSYPSDASANQVASGTAPTSWTGSVEEGNDVNGTTTQTFTTAFAICSTTAMTT
                     YVQSAPTPGPFGAAGAALNQVTTTVSCPAGTDLLGGGGYTDPPSNSGQPSPLHLVGAF
                     PSDSSGNLAANGGNNPAFWTASAREGNDVGNPPGTGTETTAFALCSEAANNASDSGTA
                     TVSSPASADVSVTLSAAPAAPAPGAEVTYTAVVTNNGPSSAAGVSVSDTLPAGESFVS
                     ASSPCLQSSGTVTCGAGTMADGASTSDTIVVRVTGSGTIADTASVTSSTADPNSANNT
                     ASASITVTSPSPTTVSGKVTDALGGNPIVGVCAYLYTSGGTRTADPGVCTSAAGTYTM
                     TVAAPGSYTIAFFDPSATHDTQWYNGATTEGAATAFTLSAGQALTGINAAMAPIEAVA
                     GTVTDQQSGAPLAGVCVYPYTNAGARTSDPGVCTNAQGTYLLPIANPGSYAIGFYDPD
                     GSHFTVWYNAQPAEGSANPVTLSAGQEVTGIGAAMPPVESISGTITDAASHGALSGVC
                     VYLYTAAGARTSDPGVCSLANGSYDLPVHSPGSYTLAFLDPTGTHTTQWYNGQATEGA
                     ATTITLTAGETVTGDNAAMSP"
BASE COUNT          438 a         1113 c          902 g          352 t
ORIGIN      
        1 ctggttggcg ccgaccgccg tcccggccgg ctcctcgccg cccggaaccc cggccaaccg
       61 ggtgatcaac gtgacggcct cgcccattag cgccgggccc gggaccgcct tcagcgggac
      121 ggtggcgacc tttaccatcg ccgacccgac ggcagtcgcc agccagttct cggccacggt
      181 cgactggggt gatgccacta cgccgtcgcc cgccacggtc accggtccca ccggcggtcc
      241 cttcaccgtc accgggactc acacctatgc cggcgcgggc acgttcagca cgtcggtgac
      301 catcgacgac ctcactctgc ccgccccgag cggcagttac cagcttgtcg ctacgacgat
      361 cgatggcccg aaccagtccg gcacgggctc gaaccccctc ggcttcgcca cggccaccgc
      421 ctcctgcccc cctgcgaccg tgctcgtctc cggtggcggg gtggtcgaac cggcgagcgc
      481 cgacgtctcg gtccatctcg aggggtcctt cccctccgac gcctccggcc acccgatcac
      541 gacctcgggc gccacgcccc agtcctggac cgccctctcc gaggacgggc tcggcgacgc
      601 cggcaacgtc acgaccgcct gggcgctctg cggcagcgga ggtccgagca gctcgacagt
      661 ggcactcacc acggtccagg ggccgaacgg ggcgggcagc acctcgccgc cgccgaccgg
      721 gaccgggttc acgacggtca ccgtgtcgtg tcccacaggg aagaccttga ccggcggagg
      781 ggtggagacg attcccggca acctcggtgt ggccggcggc cagccctcgc cgctgcatgt
      841 caacggctcc tatccctccg acgcctccgc aaaccaggtc gccagcggca cggcgccgac
      901 gtcgtggacc ggctcggtcg aggagggcaa cgacgtcaac gggacgacca cgcagacctt
      961 caccactgcc ttcgccatct gctcgacgac cgccatgacc acctacgtgc agtcggcccc
     1021 cacacccgga ccgttcggcg cggccggggc agcgctcaac caggtgacaa cgacggtcag
     1081 ctgtcctgcc ggtaccgacc tcctcggcgg gggcggctac accgacccgc cctcgaactc
     1141 cggccagccc tcgccgctcc accttgtcgg ggcgttcccg tccgactcct cgggcaacct
     1201 ggcggcgaac ggcggcaaca acccggcgtt ctggaccgcc tcggcccggg agggcaacga
     1261 cgtcgggaac ccgcccggca cggggaccga gacaacggcg ttcgcgctgt gttccgaagc
     1321 cgccaacaac gcctcggaca gcgggacggc gaccgtgagt tctcccgcct cggccgacgt
     1381 ctcggtgacc ctctccgccg cgccggcagc gccggcgccg ggggctgagg tgacctacac
     1441 cgccgtcgtc accaacaacg ggccctcgag cgcggccggc gtcagcgtca gcgacacgtt
     1501 gcccgccggc gagagcttcg tcagcgccag ctcgccgtgt ctccagtcct cgggcaccgt
     1561 cacctgcgga gccgggacca tggccgacgg ggcgagcacc agcgacacga tcgttgtccg
     1621 ggtcaccggg agcggcacca tcgccgacac cgcgtcggtc acctccagta ccgccgaccc
     1681 caactcggcc aataacacgg cgagcgcgtc gatcaccgtg accagcccgt cgccgaccac
     1741 ggtctcgggc aaggtgaccg acgccctggg cgggaacccg atcgtgggcg tgtgcgccta
     1801 cctctacacc tccggcggga cccggaccgc ggaccccggg gtctgcacca gcgcggcggg
     1861 gacctacacg atgaccgtcg ccgcgcccgg ttcgtacacc atcgccttct tcgacccgag
     1921 cgccacccac gacacccagt ggtacaacgg cgcgactacc gagggcgccg ccacggcatt
     1981 caccctcagc gccggccagg cactgaccgg cataaacgcc gccatggcac cgatcgaggc
     2041 ggtcgctggc acggtgaccg atcagcagag tggcgctccg cttgccggtg tctgcgtcta
     2101 cccctacacc aacgcgggcg cgcggacctc cgacccgggc gtctgcacca acgcccaggg
     2161 cacctacctg ctcccgatcg ccaacccggg ttcctacgcc atcgggttct acgaccccga
     2221 cgggagccac ttcaccgtct ggtacaacgc ccagccggcg gaaggctcgg ccaacccggt
     2281 caccttgagc gccggccagg aggtcaccgg catcggcgcc gcgatgccgc cagtcgagtc
     2341 gatctccggc accatcaccg acgccgccag ccacggcgcc ctctccgggg tctgtgtgta
     2401 cctgtacacc gccgccgggg cgaggacgag cgacccgggg gtctgctcgc tcgccaacgg
     2461 gagctacgac ctgcccgtcc acagcccggg cagctacacg ctggccttcc tcgacccgac
     2521 cgggacccac accacgcagt ggtacaacgg gcaagccacg gagggggcgg ccacgacgat
     2581 caccctcacc gcgggcgaga cggtgaccgg cgacaatgct gcgatgtcgc cgtagaccag
     2641 tgggtcggtc acgagcgccg ggcgaccgtg aggaggaacg gggcggggag cagcacggac
     2701 ccgtcctctg cctggttgca ctcctcgaag acggcgcgga gccggtcccg ggcgacgcca
     2761 tcgacgccga ggctggccgc ggtcgccatc aaccgtacga acggg
//
LOCUS       DATGJT010000012         2073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1453675, whole genome shotgun sequence.
ACCESSION   DATGJT010000012 DATGJT010000000
VERSION     DATGJT010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453675"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /locus_tag="VKX24_00215"
     CDS             <1..867
                     /locus_tag="VKX24_00215"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HLJ06932.1"
                     /translation="GLLAQGGDSLRKEWLPGVASGEAVVAFALTEPSVGSDAARLSVT
                     ARRDGGDLVLAGEKASCTFAGLADACVVFARTGGPGAAGISMVLVPLDRPGVTRRVYD
                     SVGGKLTQRGSLFFDDVRVPAANQLGAEGVGFVGAMKAFDFNRAIIALGCVGTALQSL
                     EETIAYTKTRTTFGKPLAKHEGVAFPIAEHLSLLHASRLVAYEALARADAGRPHTVES
                     AMAKWLAPKQAAEAIHACLLFHGWSGYGNDLPFAQRHRDIVGFEIGDGTAEIMKAIIA
                     RDTFGREFAAYR"
     gene            complement(858..1265)
                     /locus_tag="VKX24_00220"
     CDS             complement(858..1265)
                     /locus_tag="VKX24_00220"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ06933.1"
                     /translation="MPDLDVRRIFDRVAHLYDTGWLQRALYVALQDRALAELRTLQPR
                     SVLDVGCGTGIFADRLARELTPAAVAGCDLSAGMLAQAAARGRRVGWVGGDSARLPLR
                     GGAVDAVVCPRPRFGHLSGTVPNRCPNDGRCHL"
     gene            1340..2035
                     /locus_tag="VKX24_00225"
     CDS             1340..2035
                     /locus_tag="VKX24_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06934.1"
                     /translation="MEQTDPFAQAVARLSDEGLALEISDRTFRLVDAVRGDAGAAALR
                     LLGMVQAAAPVAVATHGATQVAAAVWVPPRLFVARWGRNRWVVGYRLAAGSRPNDYVR
                     TEGRIPGHLETGNWYESVPDDVAEAFAGVGLTLASAPFPVPAQPEPPPPATPRRTAAA
                     AGGGSGGGAGRVSSAEKAPPARPAPRRVGAPKPPPAPKPPPPTSRVCPGCNMRRTLTQ
                     FAPGSDLCIDCRE"
BASE COUNT          251 a          805 c          767 g          250 t
ORIGIN      
        1 ggcctgctgg cccagggcgg cgactccctc cgcaaggagt ggctgcccgg cgtggcgtcg
       61 ggggaggccg tggtggcctt cgccctgacc gaaccgtcgg tcggctcgga cgccgcccgg
      121 ctctcggtca ccgcccggcg cgacggcggc gacctcgtcc tggcggggga gaaggcgtcg
      181 tgcacgttcg ccggcctggc cgacgcctgc gtcgtcttcg cccggacggg cggcccgggg
      241 gcggcgggga tcagcatggt gctcgtgccc ctcgaccggc ccggcgtcac ccgccgcgtc
      301 tacgacagcg tcggcgggaa gctgacccag cggggttcgc tgttcttcga cgacgtccgg
      361 gtgccggccg ccaaccagct cggcgccgag ggcgtcgggt tcgtgggggc catgaaggcc
      421 ttcgacttca accgggcgat catcgccctc ggctgcgtcg gaacggccct ccagtcgctg
      481 gaggagacca tcgcctacac caagacccgg accaccttcg gcaagccgct ggccaagcac
      541 gagggcgtgg ccttccccat cgccgaacac ctctcgctgc tccacgccag ccggctggtg
      601 gcctacgagg cgctggcccg ggccgacgcc gggcggcccc acacggtgga gtcggccatg
      661 gccaagtggc tggcgccgaa gcaggcggcg gaggccatcc acgcctgcct gctgttccac
      721 ggctggtcgg gctacggcaa cgacctgccc ttcgcccagc gccaccgcga catcgtgggg
      781 ttcgagatcg gcgacggcac ggcggagatc atgaaggcga tcatcgcccg cgacaccttc
      841 ggccgggagt tcgccgccta caggtgacac cgaccgtcgt ttggacatct gttggggaca
      901 gtccccgaca gatgtccaaa cctcgggcgc gggcagacca cggcgtcgac ggcgccgccc
      961 cgcaggggga gccgggccga gtcgcccccc acccagccga cccggcggcc gcgggccgcg
     1021 gcctgggcca gcatcccggc cgagaggtcg cagccggcca ccgccgccgg cgtgagctcc
     1081 cgcgccaggc ggtcggcgaa gatgcccgtg ccgcagccca cgtcgagcac cgaacggggc
     1141 tgcaacgtcc gcaattcggc cagggcgcgg tcctgcagcg ccacgtagag cgcccgctgc
     1201 agccagccgg tgtcgtagag atgggcgacg cggtcgaaga tccggcggac gtcgaggtcg
     1261 ggcatgcggt cagtctggtc gccaccgcct ccgggtgccc gtcagcggcc cccggccggt
     1321 agggtgccgt ccggtgtcga tggagcagac ggacccgttc gcccaggccg tcgcccggct
     1381 ctccgacgag ggtctggcgc tggagatctc cgaccgcacc ttccggctgg tcgacgccgt
     1441 ccggggcgac gccggagcgg ccgccctccg gctgctgggc atggtgcagg cggcggcgcc
     1501 ggtggccgtc gccacccacg gcgccaccca ggtggcggcg gcggtgtggg tgcccccccg
     1561 gctgttcgtg gcccgatggg gccgcaatcg ttgggtggtc ggctaccggc tggcggccgg
     1621 gtcccggccc aacgactacg tccgcaccga gggtcggatc cccggccacc tcgagaccgg
     1681 caactggtac gagtcggtcc ccgacgacgt ggccgaagcc ttcgccggcg tcggcctgac
     1741 gctggcctcg gcgccgttcc cggtgcccgc ccagcccgag cccccgccgc cggccacacc
     1801 ccgccgcacc gcggccgccg ccggcggggg gagcggcggt ggcgccgggc gggtgtcgtc
     1861 ggccgagaag gcgccgccgg cccggccggc gccccgccgg gtcggcgccc cgaagccgcc
     1921 gccggccccg aagccgccgc cgcccaccag ccgggtctgc cccgggtgca acatgcgccg
     1981 gacgctgacg cagttcgccc ccggctccga cctctgcatc gactgccgcg aataggcgcc
     2041 gctcaaccgg cgccggcggc cagctcccgc agc
//
LOCUS       DATGJT010000013         2470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_1362,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000013 DATGJT010000000
VERSION     DATGJT010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1362"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /gene="nusG"
                     /locus_tag="VKX24_00230"
     CDS             <1..502
                     /gene="nusG"
                     /locus_tag="VKX24_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HLJ06935.1"
                     /translation="NKVRSNMGNVVASRGLEDRVFEVVIPMEDVDEFKGGKKVTVQKK
                     VFPGYLLVRCDLDDDTWGAIRNTPGVTGFVGPGTKPTPLSRREVENILQVKPEGVPGA
                     APKRTRARLEYEVNETVRVKEGPFADFSGQISEINEDQLKLKVLVNIFGRETPVELEF
                     SQVAKL"
     gene            532..963
                     /gene="rplK"
                     /locus_tag="VKX24_00235"
     CDS             532..963
                     /gene="rplK"
                     /locus_tag="VKX24_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020544879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HLJ06936.1"
                     /translation="MPPRKRVLAKVKIQLEAGSATPAPPVGTALGPHGVQTMEFCKQY
                     NAATESQRGTVIPVDITIYEDRSFTFELKTPPTPVLLRQAAGVDKGSATSGRERVGSV
                     TDAQLADIARVKLPDLNTDDLEQAKRQVAGTARSMGITVSG"
     gene            996..1721
                     /gene="rplA"
                     /locus_tag="VKX24_00240"
     CDS             996..1721
                     /gene="rplA"
                     /locus_tag="VKX24_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012809257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HLJ06937.1"
                     /translation="MTQHGRGYKDALGKVDREAHVSVSEAVDLVKELSRAKFDETVEL
                     ALRLGVDPRKADQIVRGTLSLPSGSGRDVRVAVFAAGEKATEAREAGADVVGADDLVA
                     RVQGEGFLGFDVAIATPDLMGQVGTLGRILGPRGLMPNPKTGTVTMDVGKAVREFKSG
                     RVEYRTDKVGNVHVPVGKVSFTKAQLLANIHAVIDELVRVKPAAAKGRYLRSVTLSST
                     MGPGVHIDPARAREVEEEELASV"
     gene            1942..>2470
                     /gene="rplJ"
                     /locus_tag="VKX24_00245"
     CDS             1942..>2470
                     /gene="rplJ"
                     /locus_tag="VKX24_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006552288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HLJ06938.1"
                     /translation="MENPRPEKVAVVEEVRERLASANASVITEYRGLTVTQLAELRKA
                     LSAVGDYKVYKNTLVRLAVAGGEYEGLSDLLVGPTAIAFVNGELSAAAKALRDFARLH
                     PALIVKGGFAAGSALSTEDLTAMADLPSREVLLSRLAGGLAAPLQQLAGLLQALPRNL
                     AYGISALLDERRAAEP"
BASE COUNT          412 a          872 c          880 g          306 t
ORIGIN      
        1 gaacaaggtg cgctcgaaca tgggcaacgt cgtggcgtca cgcgggctcg aggaccgggt
       61 cttcgaggtc gtcatcccca tggaggacgt cgacgaattc aagggcggca agaaggtcac
      121 ggtccagaag aaggtgttcc ccggctacct gctggtgcgt tgcgacctcg acgacgacac
      181 ctggggcgcc atccgcaaca cgccgggcgt caccggcttc gtcggcccgg gcaccaagcc
      241 gaccccgctg tcgcggcgcg aggtggagaa catcctccag gtcaagcccg agggcgtgcc
      301 gggcgcggcg ccgaagcgga cgcgggcgcg gctcgagtac gaggtcaacg agaccgtgcg
      361 ggtgaaggaa ggccccttcg ccgatttctc gggccagatc tccgaaatca acgaggacca
      421 gctcaagctc aaggtgctgg tcaacatctt cggccgggag accccggtcg agctcgagtt
      481 cagccaggtc gccaagctct agcggccacg accaacgacc agaggaagac catgcccccc
      541 cgcaagcgag tgctcgccaa ggtgaagatc cagctcgagg ccggatcggc cacccccgcg
      601 ccccccgtcg gcaccgccct cgggccgcac ggggtgcaga ccatggagtt ctgcaagcag
      661 tacaacgcgg cgaccgagtc ccagaggggc accgtcatcc ccgtcgacat caccatctac
      721 gaggaccggt ccttcacctt cgagctcaag accccaccca cgccggtcct gctccgtcag
      781 gcggcgggcg tcgacaaggg ctcggccacc tcgggccggg agcgggtggg gtccgtgacc
      841 gacgcccagc tcgccgacat cgcccgcgtc aagctgcccg acctcaacac cgacgacctg
      901 gagcaggcca agcgccaggt ggccgggacc gcccgctcca tgggcatcac cgtctcgggc
      961 tgagcgccgg cgaccgaagg gaaggacgag gagagatgac ccagcacggc aggggttaca
     1021 aggatgcgtt gggcaaggtg gaccgggagg cccacgtcag cgtgtccgag gccgtcgacc
     1081 tggtgaagga gctgtcccgg gcgaagttcg acgagaccgt cgagctggcc ctgcggctcg
     1141 gcgtggaccc gcgcaaggcg gaccagatcg tgcggggcac cctgtcgctg ccgtcggggt
     1201 ccggccggga cgtgcgcgtc gcggtcttcg ccgccggcga gaaggcgacc gaggcccgcg
     1261 aggccggggc cgacgtggtc ggcgccgacg acctggtcgc ccgggtccag ggcgagggct
     1321 tcctgggctt cgacgtcgcc attgccacgc cggacctcat gggccaggtc ggaaccctcg
     1381 ggcggatcct cggcccccgc ggcctcatgc ccaacccgaa gaccgggacc gtcacgatgg
     1441 acgtgggcaa ggcggtgcgc gagttcaaga gcgggcgcgt cgagtaccgg accgacaagg
     1501 tcggcaacgt gcacgtgccc gtgggcaagg tgtcgttcac gaaggcccag ctcctggcca
     1561 acatccacgc tgtgatcgac gagctggtgc gggtgaagcc ggccgccgcc aagggccgct
     1621 acctgcggtc ggtgacgctg tcgtccacca tgggccccgg cgtccacatc gacccggcgc
     1681 gggcccggga ggtcgaggag gaggagctcg cctccgtctg aaagcgccct ctgcccgacg
     1741 aggtagagtg caccggctcg ttcgggagga cgagccacag accgccgcag aactccggtg
     1801 caccccggtg cctaaggggc tcgtcgagcc cgccagacga ggcgatccga tccgggagcg
     1861 agctcccgtg accgtcgcct ctgcagcggc cgagttggac actggctgag agggacccgg
     1921 cgccgaccgg gggagagggc gatggagaac ccacgaccgg agaaggtcgc cgtggtggaa
     1981 gaggtgcggg agcgcctcgc gtccgccaac gcctcggtca tcaccgagta ccggggcctg
     2041 accgtcaccc agctcgccga actgcgcaag gcgctgagcg ccgtcggcga ctacaaggtc
     2101 tacaagaaca ccctcgtccg cctggcggtc gccggcggcg agtacgaggg cctgagcgac
     2161 ctgctggtcg ggccgacggc catcgccttc gtgaacggcg agctgagcgc ggccgccaag
     2221 gccctgcgcg acttcgcccg gctgcacccg gccctgatcg tgaagggcgg cttcgccgcc
     2281 ggcagcgcgc tcagcaccga ggacctcacc gccatggccg acctgccgtc ccgggaggtc
     2341 ctcctgtccc gcctggccgg cggcctggcg gcaccgctgc agcagctcgc cgggctgctc
     2401 caggcgctgc cccggaacct cgcctacggc atctcggcgc tgctcgacga gcggcgcgcg
     2461 gccgagcccg
//
LOCUS       DATGJT010000014         3293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1350091, whole genome shotgun sequence.
ACCESSION   DATGJT010000014 DATGJT010000000
VERSION     DATGJT010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350091"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1740
                     /gene="murQ"
                     /locus_tag="VKX24_00250"
     CDS             <1..1740
                     /gene="murQ"
                     /locus_tag="VKX24_00250"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: protein motif:HMM:NF009222.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HLJ06939.1"
                     /translation="SLFVANHPHVGQVLDSGRPVAAGCLNSEAYREFVRSWAAAAVET
                     GADRIFWDEPHWAHPSHFDEPRERWGCRCPRCVRRWCDETGDDDMPTELSAAVRAFRE
                     RCLVEFLGELTAYVASLGGRSTVCLLPHVSGPLGVGDWSAVARLPGVATLATDPYWKA
                     FDEPVGPFVTEFSERVAQQAAGAGVEAQIWIQGFRLGPEDGDDIRAAVAAARAAGVGD
                     LWTWGYEACGHMTYLGTREPETVWQILCDALTSGPDGGPPDLGSENRGKRGISCPEPE
                     PAGPAGLGGLVTEGVRPELADLDLRPTQELVRLMASEEAAVAAAVRRAAPAIAAAIDA
                     VVARLTERPDGRIVYVGAGTAGRMGVLDAAECGPTFNAADKVVALMAGGPDAVTTPKE
                     GAEDDAAAGAAELRALGVGPSDAVVGISASGRTPYVLGALSAAREAGALTVGLSCHPG
                     SLVSAGADHAVEVVVGPEVIAGSTRLKAGAAQKLVLNTISTVVMVRLGRTFGNLMVDV
                     RAGSEKLVDRARRIVATAAGRSPAEAAAALDAAGGEVKTAIVALLAGVDPAEARRRLA
                     AANGVVRRALAAP"
     gene            1737..2909
                     /locus_tag="VKX24_00255"
     CDS             1737..2909
                     /locus_tag="VKX24_00255"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011031767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HLJ06940.1"
                     /translation="MIVIGLMSGTSMDGIDAAAADLELDGEVLRLRPLGHETTPYSDG
                     LAAALRAALPPNATTMEDVCRLDTAVGREFAAAARRAADRHPGAALVVAHGQTVFHWV
                     EPDGRVAGTLQIGRPAWIAEGTGLPVVSDLRSADVAAGGQGAPLVALFDVLLLGGDPG
                     GPRAALNLGGITNLTIVGPGRAPVAYDAGPANALIDAAVVAATHGAETCDHGGARAAR
                     GTVDRALLALLLDDYFLAQPPPKTTGKERYHHGFTEAAVDELGHDPGVDDLVATLTAH
                     AAEVAAAECRRHGVAEVVASGGGTDNPVLMAMLADRLAPGRLRRIDEFGIPSAAKEAY
                     AFSVLGFLTWHGVPGNVPACTGARHPVVLGSITAGSAALRLPSPGRPPRRLGVAGL"
BASE COUNT          360 a         1319 c         1211 g          403 t
ORIGIN      
        1 agcctcttcg tggccaacca tccccacgtc gggcaggtgc tggattccgg gcggccggtg
       61 gccgccggct gcctcaattc cgaggcctac cgggagttcg tccggtcgtg ggcggcggcg
      121 gcggtggaga ccggcgccga ccgcatcttc tgggacgagc cccactgggc ccacccgtcc
      181 cacttcgacg agccccggga gcgttggggc tgccgctgcc cccgctgcgt acggcggtgg
      241 tgcgacgaga cgggcgacga cgacatgccg accgagctct cggccgcggt gcgggccttc
      301 cgggagcgct gcctggtcga gttcctcggc gagctcaccg cctacgtcgc cagcctcggc
      361 ggccggagca cggtctgtct gctgccccac gtgagcggcc cgctcggcgt cggcgactgg
      421 tcggcggtgg cccgcctccc cggtgtggcg acgctggcca ccgaccccta ctggaaggcc
      481 ttcgacgagc ccgtcgggcc gttcgtgacc gagttctcgg aacgggtggc gcagcaggcg
      541 gccggcgccg gcgtcgaggc ccagatctgg atccagggct tccgcctcgg cccggaggac
      601 ggcgacgaca tccgggccgc cgtcgccgcc gcccgcgccg ccggcgtcgg cgacctctgg
      661 acctggggct acgaggcctg cggccacatg acctacctcg gtacccggga gccggagacg
      721 gtgtggcaga tcctctgcga cgccctcact tccggccccg acggcggccc cccggatctc
      781 ggcagcgaaa accgcggaaa gcgcggtatt tcctgcccgg aaccggagcc ggcggggccg
      841 gccggcctcg gggggctggt gaccgaggga gtgcggcccg agctggccga cctcgacctg
      901 cggccgacgc aggagctcgt ccggctgatg gcctcggagg aggcggcggt cgccgccgcc
      961 gtccggcggg cggcgccggc gatcgccgcc gccatcgacg ccgtcgtggc ccggctgacc
     1021 gaacggcccg acggccggat cgtctacgtc ggcgccggca cggccgggcg catgggcgtg
     1081 ctcgacgccg ccgagtgcgg cccgacgttc aacgccgccg acaaggtcgt cgccctcatg
     1141 gccggcggcc ccgacgccgt cacgaccccg aaggagggcg cggaggacga cgccgccgcc
     1201 ggcgccgccg agctccgggc cctcggcgtg ggcccgtccg acgccgtcgt cggcatcagc
     1261 gccagcggac gcacccccta cgtgctgggg gcgctctccg ccgcccggga ggccggtgcc
     1321 ctcacggtcg gcctgtcctg ccaccccggc tcgctggtct ccgccggcgc cgaccacgcc
     1381 gtcgaggtcg tcgtcggccc cgaggtgatc gccggttcca cccgcttgaa ggccggcgcc
     1441 gcccagaagc tggtgctcaa cacgatctcg accgtcgtca tggtccgcct cggccggacg
     1501 ttcgggaacc tgatggtcga cgtccgggcc ggcagcgaga agctcgtcga ccgggcccgc
     1561 cgcatcgtgg ccacggccgc cggccgctcg ccggccgagg ccgccgccgc cctcgacgcc
     1621 gccggcgggg aggtgaagac ggcgatcgtc gccctcctgg ccggcgtcga cccggccgag
     1681 gcccggcggc gcctggccgc cgccaacggc gtcgtccgcc gggctctcgc cgcgccgtga
     1741 tcgtcatcgg gctgatgtcg gggacgtcga tggacggcat cgacgccgcc gccgccgacc
     1801 tcgagctcga cggtgaggtc ctgcgcctgc ggcccctcgg ccacgagacc acgccgtact
     1861 ccgacggtct ggccgccgcc cttcgggccg cgctcccgcc caacgccacc accatggagg
     1921 acgtctgccg cctcgacacc gccgtcggcc gggagttcgc cgccgccgcc cgccgggccg
     1981 ccgaccgcca ccccggggcg gcgctggtcg tggcccacgg ccagacggtc ttccactggg
     2041 tcgagccgga cgggcgggtg gcgggcacgc tccagatcgg ccggccggcg tggatcgccg
     2101 agggcaccgg ccttcccgtc gtctcggacc tccgcagcgc cgacgtcgcc gccggcggcc
     2161 agggggcgcc cctcgtcgcc ctgttcgacg tcctcctcct gggcggcgac cccggcggtc
     2221 cccgggcggc cctcaacctc ggcgggatca ccaacctgac gatcgtcggg cccggccgcg
     2281 ccccggtcgc ttatgacgcc ggtccggcca acgccctcat cgacgccgcc gtcgtggccg
     2341 ccacgcacgg ggccgaaacg tgcgaccacg gcggggcccg ggcggcccgg gggacggtcg
     2401 accgagcgct gctggcgctc ctgctggacg attacttcct cgcccagccc ccgccgaaga
     2461 ccaccggcaa ggagcggtac caccacggct tcaccgaggc cgccgtcgac gagctgggcc
     2521 acgaccccgg tgtcgacgac ctcgtggcca cgttgaccgc ccatgccgcg gaggtcgccg
     2581 ccgccgagtg ccgccgccac ggcgtggccg aggtcgtcgc ctccggcggc ggcaccgaca
     2641 accccgtcct catggcgatg ctggccgacc ggctggcccc cgggcgcctc cggaggatcg
     2701 acgagttcgg catcccctcg gccgccaagg aggcctacgc cttctccgtg ctcgggttcc
     2761 tcacctggca cggcgtcccc ggcaacgtcc ccgcctgcac cggcgcccga cacccggtcg
     2821 tcctcggcag catcaccgcg gggtcggcgg cgctccggct gccgtccccg ggtcggcctc
     2881 cccgccggct cggcgtcgcc ggcctctgag cggtctgacc gggagatgac cgggcgggcc
     2941 aggggcccgc cagccccggc ccgcccggaa cctgcgccgg ggcctcagtc gtttcgcggt
     3001 cccatcgacg ggtgccagcc catggccggg tgccatcccc cgtcggccgg ccgcgtcggg
     3061 cggggccggg tggggaccgg cacggccacg ggccggcgcg tcccccgggc ccggtgaagg
     3121 cggcagcccg gtgaccgcgg gctcctcccg gcggcgctca tgcggtgcgg aactgcgaac
     3181 ggagggccag cacccggtcg gcgtaggcat cggccgcggc gtaggagccc tgcgccatca
     3241 gcgaggtgat cccctggttg taggcgatca gcgcctggcg gacgttgccg tgg
//
LOCUS       DATGJT010000015         2172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_935123, whole genome shotgun sequence.
ACCESSION   DATGJT010000015 DATGJT010000000
VERSION     DATGJT010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_935123"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..292
                     /locus_tag="VKX24_00260"
     CDS             104..292
                     /locus_tag="VKX24_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013906467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HLJ06941.1"
                     /translation="MSVETVTLKIPKPLYLRLQKLIEHTGFRSPTEFVLFVLRDLAGA
                     ETEDLEQVRDRLKKLGYL"
     gene            complement(289..1245)
                     /locus_tag="VKX24_00265"
     CDS             complement(289..1245)
                     /locus_tag="VKX24_00265"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CobW family GTP-binding protein"
                     /protein_id="HLJ06942.1"
                     /translation="MTGGTGAATVPVDIVGGYLGSGKTTLLRRLLEQGTGERVAVVVN
                     ELGEIGIDGLVVGGLGFAERMVELSSGCICCQLDTVHFEIALEELCVDVAPDRIVIET
                     SGVADPGTLARRLAGLGRPLGSLVTVADTVNLDRVLAEPIGRAQIAAADFLVLSKLDL
                     PETLGPEESERRLRAGNARAVMVPGPVGAAGLGLLFGSGLPGGRPGIYEGGDTGAVPP
                     VLDLDSVSWRADRPLDRRAVLDLLGGLPPAVYRAKGVVRYARASVPAVVNVTAGRVQT
                     QWEPALDDSAGPGAALVFIGRDVPAWRGALLAALDACISGAV"
     gene            complement(1242..>2172)
                     /locus_tag="VKX24_00270"
     CDS             complement(1242..>2172)
                     /locus_tag="VKX24_00270"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ06943.1"
                     /translation="SPRLTRSVSPPGWFPRVEELGYRTDVDPELAWDDPAAVAAELLE
                     LTAVRRRLWWTAWEQVDWSLFWGVFTETDRLHHFHWGRRGEPWLEELLDRLYRALDDH
                     LGEVAGRLEDGDALFLVSDHGFAPIRAEVHLNRWLAEQGFLRFESDCPESLSDIGPGT
                     VAFALDPGRIYLHRKGRYPLGEVVPSDEPQILADLAAGLAGLRHPAGGDTALGPILLR
                     DNVFTGPAAADGPDLTVLPGAGFDPKGTVGAGPVFTRSALTGMHSFGDAACLALGSGR
                     PERCRLEDVGASVLHHLGGDASDLDGEPLLVDG"
BASE COUNT          320 a          773 c          813 g          266 t
ORIGIN      
        1 ctcggtcggt acactcctat aggagtgcat attactacac tcccgcagga gtgcaagtta
       61 cagcttcatg tcggccgtcg gtcggcatgc gacactctcc cgcatgagtg tcgagacggt
      121 gacgctgaag atcccgaaac cgctctacct ccggctgcag aagctcatcg agcacacggg
      181 cttccggtcg cccaccgagt tcgtcctctt cgtcctgcgg gatctggccg gggccgagac
      241 cgaggacctc gagcaggtcc gcgaccgcct gaagaagctg ggctacctct agaccgctcc
      301 gctgatgcag gcgtcgaggg ccgccagcag ggcgcctcgc caggccggga cgtcccggcc
      361 gatgaagacc agcgccgctc cgggcccggc ggaatcgtcc agggccggct cccactgggt
      421 ctggacgcgg ccggcggtca cgttgaccac cgccggaacc gaggcccggg cgtagcggac
      481 gacgcccttg gcccggtaca cggccggcgg gagcccgccc agcaggtcga ggacggcgcg
      541 ccggtcgagg ggccggtcgg cccgccacga gacgctgtcg aggtcgagga cgggcgggac
      601 ggcaccggtg tcgccgccct cgtagattcc cggccgcccg cccgggagtc ccgacccgaa
      661 cagcaggccg aggccggcgg cgccgaccgg gcccgggacc atcaccgccc gggcgttgcc
      721 cgcccgcaga cggcgctccg actcctcggg gccgagggtc tccggcaggt cgagcttgga
      781 gaggacgagg aagtcggcgg cggcgatctg cgcccggcca atgggttcgg cgaggacccg
      841 gtcgaggttc acggtgtcgg ccacggtgac gagcgatccc agcggccggc cgaggccggc
      901 caggcggcgg gccagcgtcc ccgggtcggc caccccggac gtctcgatga cgatccggtc
      961 gggtgcgacg tcgacgcaga gttcctcgag ggcgatctcg aagtgcacgg tgtcgagctg
     1021 gcagcagatg cagcccgagc tgagctcgac catccgctct gcaaagccga gcccgcccac
     1081 gacgaggccg tcgatgccga tctcgccgag ctcgttgacg acgaccgcca cgcgctcccc
     1141 cgtcccctgc tcgaggagcc ggcgcagcag cgtcgtcttg ccgctgccga ggtacccgcc
     1201 gacgatgtcg acgggaacgg tggcggcgcc ggttccgccc gtcacccgtc gaccagcagc
     1261 ggttcgccgt cgaggtcgga ggcgtcgccg ccgaggtggt ggagcaccga cgcgccgacg
     1321 tcctcgaggc ggcagcgctc cggccggccg gaaccgaggg cgagacaggc ggcatcgccg
     1381 aagctgtgca tcccggtcaa ggccgaacgg gtgaagacgg ggccggcgcc gaccgtgccc
     1441 ttggggtcga accccgcccc ggggagcacc gtgaggtcgg gcccgtcggc cgccgccggg
     1501 ccggtgaaga cgttgtcccg caacaggatc gggcccagcg cggtgtcgcc gccggccggg
     1561 tggcgcaggc cggcgagacc ggcggcgagg tcggcgagga tctggggttc gtcgctcggc
     1621 acgacctccc ccagcggata gcggcccttg cggtgcaggt agatccgacc cgggtcgagg
     1681 gcgaaggcca ccgtcccggg accgatgtcg gaaaggcttt ccgggcagtc ggactcgaag
     1741 cgcaggaagc cctgctcggc cagccagcgg ttgaggtgga cctcggcccg gatcggggcg
     1801 aagccgtggt cggagaccag gaacagcgcg tcgccgtcct ccagccggcc cgccacctcg
     1861 ccgaggtggt cgtcgagcgc ccggtagagc cggtcgagca gctcctcgag ccacggctcg
     1921 ccccggcggc cccagtggaa gtggtgcagc cggtcggttt cggtgaagac gccccagaac
     1981 aggctccagt cgacctgttc ccaggcggtc caccacaggc ggcggcggac ggcggtcagc
     2041 tcgaggagct cggcggccac cgccgccggg tcgtcccagg ccagctcggg gtcgacgtcg
     2101 gtgcggtagc cgagctcctc aacccgcggg aaccagcccg gcggcgagac gctgcgagtg
     2161 aggcgggggc tg
//
LOCUS       DATGJT010000016         2822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_1736,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000016 DATGJT010000000
VERSION     DATGJT010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..662
                     /locus_tag="VKX24_00275"
     CDS             <1..662
                     /locus_tag="VKX24_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06944.1"
                     /translation="LALVITPIVVLVVAAYVGDALTTTWADRHPLLLVLLNARSRILV
                     LTTNQLDAVTFYVAAGLRLLSSDPLFYLLGRWYGDAMVVWLEKRSKTFGEQIRLYERA
                     FTKAAYPLVFIAPNPYICLFAGAAGMPLPSFYALNIAGTLARLYLIRRVGEAFDAPIR
                     SVLRFFDRFRIPLLLLSVALVVFVLWSDRRQGKDEIGSMLELAEHPPDETEAAEPDAE
                     E"
     gene            complement(703..2034)
                     /locus_tag="VKX24_00280"
     CDS             complement(703..2034)
                     /locus_tag="VKX24_00280"
                     /inference="COORDINATES: protein motif:HMM:TIGR02608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06945.1"
                     /translation="MGRPIAVAVVVLGALLGPAAPSTAAGPSTGAGGLDPTFAQGGKV
                     VVTPPGEAGEWPGGQAVQPDGDVVVAGTAAPARSGSVFLLLRFRGDGGLDPTFGTGGR
                     VWTDLATLATPLRGAVAGDVALGSSSASAVVVQPDGRIVVGGSTQSGGSTAFAILRYL
                     PDGRPDPSFGSDGLTVTDFDPATNDAIRSLALLPDGRIVAAGVAGDAAALARYRPDGQ
                     LDTTFGDARDGTVTTGRGLLNALGLAVDGDGKLLVTGQAGLPGGPFDIGVARYLADGV
                     LDPGFGHGGLMTTDLGSTGEWPAGVASGPGGTVVVGGTTGSSFALLRYTAHGGLDPAF
                     GAAGVSTAGPDLGAVRALVRLPDARVVLVGDQVVGNWREVALARYLPAGALDPGFGRG
                     GVVGTDVTPGHDDGVAAALYPGGRLVVAGTSVDADNLHPSVFVLRYTGIGG"
     gene            2122..>2822
                     /locus_tag="VKX24_00285"
     CDS             2122..>2822
                     /locus_tag="VKX24_00285"
                     /inference="COORDINATES: protein motif:HMM:NF014709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HLJ06946.1"
                     /translation="MVALPGVPRREAVRNDGELALADFLALPERAAKPRSRGLTHVID
                     RGLPVATLESLLDLAGAHIDFLKFGWGTAYVTRHIRAKVVACREAKVRTCVGGTLLEL
                     ACVQGKMREFVRWVDSIGFDAVEVSEGTVELGAGIKAGLIEAMARDFVVLAEVGSKDT
                     EATVRPSEWAAQMEADLASGAAFVLAEGRESGTVGLYHPDGRVREPLVSALVARVPAD
                     RIIFEAPTPAQQRWFV"
BASE COUNT          365 a         1052 c         1030 g          375 t
ORIGIN      
        1 aactcgctct cgtcatcacc ccgatcgttg tcctcgtcgt cgccgcctac gtcggcgacg
       61 ccctgacgac cacctgggcc gaccgccacc cgctcctgct cgtattgctc aacgcccgca
      121 gccggatcct cgtgctgacc accaaccagc tcgacgccgt gacgttctac gtcgcggccg
      181 gcctgcggct gctgtcttcg gatccgctct tctacctcct cggccggtgg tacggcgacg
      241 ccatggtcgt ctggctggag aagcggtcga agaccttcgg ggagcagatc cggctctacg
      301 aacgggcctt caccaaggcc gcctacccgc tggtcttcat cgcccccaat ccctacatct
      361 gcctcttcgc cggtgccgcc gggatgcccc tcccgagctt ctacgccttg aacatcgccg
      421 gcacgctggc ccggctgtat ctgatccgcc gggtcgggga ggcgttcgac gctccgatcc
      481 gttcggtcct gcggttcttc gaccgcttcc ggataccgct gctgctcctc agcgtggcgc
      541 tggtcgtctt cgtgctgtgg agcgatcgcc gccaggggaa ggacgagatc ggctcgatgc
      601 tggaactggc cgagcacccg cccgacgaga ccgaggccgc cgagcctgac gccgaggagt
      661 gaccgcggcg gccgcccggc ctcggtcgcc ggcgggtcag cgtcacccgc cgattccggt
      721 gtagcggagg acgaagacgc tcgggtggag gttgtcggcg tcgaccgacg tgccggccac
      781 caccaaccgg cctccggggt agagggcggc ggcgaccccg tcgtcgtggc cgggggtcac
      841 gtccgtgccc acgacgccgc cgcggccgaa gcccgggtcg agggctccgg cgggcaggta
      901 gcgggccagg gcgacctccc gccagttccc caccacctgg tccccgacga ggacgacccg
      961 agcgtcgggc agccggacca gggcgcgaac ggcgccgagg tcgggcccgg ccgtggaaac
     1021 gccagccgcg ccgaacgccg ggtcgaggcc gccgtgggcg gtgtagcgca gcagcgcgaa
     1081 cgacgatccc gtcgtcccgc cgaccacgac cgtgccgccc ggcccggagg cgacgccggc
     1141 cggccattca ccggtgctgc cgaggtccgt cgtcatcagg ccgccgtggc cgaagcccgg
     1201 gtccaggacg ccgtcggcga ggtagcgggc cacgccgatg tcgaacgggc cgcccggtaa
     1261 ccccgcctgg ccggtcacga gcagcttccc gtccccatcg acggccaggc cgagggcgtt
     1321 gagcaggccc cggccggtcg tgaccgtgcc gtcgcgggcg tccccgaagg tggtgtcgag
     1381 ttggccgtcc ggccggtagc gggccagggc ggcggcgtcg ccggccaccc cggcggccac
     1441 gatccgcccg tcgggcagca gcgccagcga cctgatcgcg tcgttggtgg cgggatcgaa
     1501 gtccgtcacc gtcagcccgt cggagccgaa cgacgggtcc ggacggccgt cgggcaggta
     1561 ccgcaggatg gcgaacgcgg tgctgccgcc gctctgggta ctgcccccga ccacgatcct
     1621 gccgtcgggc tggacgacga cggccgaggc gctcgacgat cccagcgcca cgtcgccggc
     1681 cacggcaccc cggagtgggg tggccagggt ggcgagatcg gtccacaccc gtccgccggt
     1741 cccgaacgtc gggtcgagcc cgccgtcgcc gcggaaccgc agcagcagga acacggagcc
     1801 ggaccgggcc ggggcggcgg tcccggcgac gacgacgtcg ccgtcgggtt ggaccgcctg
     1861 gccgcccggc cactcgcccg cttcgcccgg cggcgtcacc acgaccttgc cgccctgggc
     1921 gaacgtcggg tcgagaccgc cggcaccggt ggacggtccg gccgcggtgg acggcgccgc
     1981 cggccccagc agcgcgccga gcaccacgac ggcgacggcg atcgggcggc ccaccgccgg
     2041 atggtatcgc tcgacccccg ggcccctggg gggcggggcg atcaggacag gcggagccgc
     2101 cggagttcta acctggcatc catggtggcg ttgccgggag tgccccggag ggaagcggtg
     2161 cgcaacgacg gggagctggc gctggccgac ttcctggccc tgcccgagcg cgccgccaag
     2221 ccccgctccc ggggcctgac gcacgtcatc gaccggggcc tgcccgtcgc cacgctcgag
     2281 tcgctgctcg acctggccgg cgcccacatc gacttcctca aattcggctg gggcaccgcc
     2341 tacgtcaccc gccacatccg ggccaaggtc gtggcctgcc gggaggccaa ggtccgcacc
     2401 tgcgtcggcg gcacgctcct ggaactggcc tgcgtccagg ggaagatgcg ggagttcgtg
     2461 cgctgggtcg actccatcgg gttcgacgcc gtcgaggtgt cggagggaac ggtggagctc
     2521 ggcgccggta tcaaggccgg gctcatcgag gccatggccc gagacttcgt cgtgctggcc
     2581 gaggtcggct cgaaggacac cgaggcgacg gtgcggccct ccgagtgggc ggcgcagatg
     2641 gaggccgacc tggcctccgg ggcggccttc gtgctggccg agggccgcga gtccggcacc
     2701 gtcgggctct accatccgga cgggcgggtc cgcgagccgc tcgtctcggc cctggtggcc
     2761 cgggtgccgg ccgaccggat catcttcgag gcgccaacgc cggcgcagca gaggtggttc
     2821 gt
//
LOCUS       DATGJT010000017         2199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_209422, whole genome shotgun sequence.
ACCESSION   DATGJT010000017 DATGJT010000000
VERSION     DATGJT010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209422"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..531
                     /locus_tag="VKX24_00290"
     CDS             <1..531
                     /locus_tag="VKX24_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HLJ06947.1"
                     /translation="RWDMTYLGMQIMVEGLALAAFGFMHQISEEPLLKKMLRYVMADE
                     ARHVAFGVLSLQELYSELSGPELRERQEFAFEAAVRMRDRLRSQEVWDRLGVPWNDVL
                     TIASREDPNQDDFQILLFSRIVPNLRKLGLLDAADGWLRQKFTEMGVIAFENLSDSTE
                     DEDAFADGSPVARLAD"
     gene            580..1488
                     /gene="dapA"
                     /locus_tag="VKX24_00295"
     CDS             580..1488
                     /gene="dapA"
                     /locus_tag="VKX24_00295"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013900051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HLJ06948.1"
                     /translation="MGEAEHRPRFGSLLTAMVTPFDEGGALDLEAASALVRYLEGRGT
                     QGLVVAGSTGEGSVLSDKEKLALFAAVKEAATVPVVAGVGSNDTAHAAELARGAASAG
                     VDGLLVVTPYYNRPPQAGLRRHFEQVAGATDLPVIVYDIPVRTGRAIALDTMVELARE
                     VPTIVGVKDSTHDPARAARLVARAPSTFELYSGDDDMVLPMLAVGAVGLVSVASHWAG
                     RELAELLTAAAKGDFAGARAVLARLFDSFDFESTEAFPNPLPAKAACRALGLAVGQCR
                     DPLGPAPAALEDAARRVLEGLGLPVG"
     gene            1481..>2199
                     /locus_tag="VKX24_00300"
     CDS             1481..>2199
                     /locus_tag="VKX24_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HLJ06949.1"
                     /translation="MADRPRPDRGDGARPGRSNRAPFGRRRRPARPAPTPATPARDRP
                     VRVVFLGGLGEIGRNCACIEVDGRIVVIDCGIMFPDPDMPGVDLVLPNFAYLHEQADR
                     VDGIVLTHGHEDHTGGLAFLLRDLSAPIYGSELTVGLASNRIKEAGLLERTSLVAVRD
                     GERRRVGPVDVEFIPVTHSVPHAHALAFHTPQGVVLHSGDFKLDLHPVDGRRTDLARF
                     GALAADPGIRLLLADSTNAEEP"
BASE COUNT          275 a          865 c          766 g          293 t
ORIGIN      
        1 cgctgggaca tgacctacct cgggatgcag atcatggtgg agggcctggc gctcgccgcg
       61 ttcgggttca tgcaccagat ctccgaggag ccgctgctca agaagatgct ccgctacgtg
      121 atggccgacg aggcccgcca cgtcgccttc ggggtgctga gcctccagga gctctactcc
      181 gagctgtccg gccccgagct gcgggagcgc caggagttcg ccttcgaggc cgcggtccgg
      241 atgcgggacc ggctccgctc ccaggaggtg tgggaccgcc tgggggtgcc gtggaacgac
      301 gtgctcacga tcgcctcgcg cgaggacccc aaccaggacg acttccagat cctgctcttc
      361 tcgaggatcg tgcccaacct gcgcaagctg gggctgctcg acgccgccga cggctggctg
      421 cggcagaagt tcaccgagat gggcgtgatc gccttcgaga acctgagcga ctcgaccgag
      481 gacgaggacg ccttcgccga cggctcgccg gtcgcccgac tggccgactg agcgggcccg
      541 tcccggggac gggacggacg gcgctggtag gttgaggcga tgggagaggc ggagcaccgg
      601 ccgcgtttcg gcagcctgct gaccgcgatg gtcacgccct tcgacgaggg cggcgcgctc
      661 gacctcgagg ccgcctcggc cctcgtccgc tacctcgagg ggcggggcac ccagggcctc
      721 gtcgtggccg gcagcacggg cgagggctcg gtgctgagcg acaaggagaa gctcgccctc
      781 ttcgccgcgg tgaaggaagc ggccaccgtc ccggtcgtgg ccggggtggg cagcaacgac
      841 accgcccacg ccgccgagct cgcccggggc gcggcctccg ccggggtgga cggcctcctc
      901 gtcgtcaccc cctactacaa ccggccgccc caggccggcc tgcgccgcca cttcgagcag
      961 gtggcggggg cgaccgacct ccccgtcatc gtctacgaca tcccggtgcg gaccggccgg
     1021 gcgatcgccc tcgacaccat ggtggagctg gcccgcgagg tcccgaccat cgtcggggtg
     1081 aaggactcga cccacgaccc ggcccgcgcc gcccgcctcg tggcccgggc gccctccacc
     1141 ttcgagctct actccggcga cgacgacatg gtgctgccga tgctcgccgt cggggccgtc
     1201 ggcctcgtga gcgtcgcctc ccactgggcc ggccgggagc tggccgaact gctcacggcc
     1261 gccgcgaagg gggacttcgc cggggcccgg gcggtgctgg cccgcctgtt cgactccttc
     1321 gacttcgagt cgaccgaggc cttccccaac ccgctgccgg ccaaggcggc gtgccgggcc
     1381 ctcggcctcg ccgtcggcca gtgccgcgac ccgctcgggc cggcccccgc cgcactcgag
     1441 gacgccgccc gccgggtgct cgagggccta ggcctcccgg ttggctgacc gcccccggcc
     1501 ggaccggggc gacggggcgc gcccggggcg ctcgaaccgg gccccgttcg gccggcgccg
     1561 gcgccccgcc cggcccgcac cgaccccggc caccccggcc cgtgaccgtc ccgtccgggt
     1621 cgtgttcctg ggcgggctgg gcgagatcgg ccgcaactgc gcctgcatcg aggtcgacgg
     1681 gcgcatcgtc gtcatcgact gcgggatcat gttcccggac cccgacatgc ccggggtcga
     1741 cctcgtcctg ccgaacttcg cctacctcca cgagcaggcg gaccgggtcg acgggatcgt
     1801 cctcacccac ggccacgagg accacacggg cggcctggcc ttcctgctcc gcgacctctc
     1861 cgcccccatc tacggctccg agctgaccgt cgggctggcc agcaaccgca tcaaggaggc
     1921 gggcctcctc gagcgcacct cgctcgtcgc cgtgcgcgac ggggagcgcc ggcgggtcgg
     1981 cccggtcgac gtcgagttca tccccgtcac ccactcggtg ccccacgcgc acgccctcgc
     2041 gttccacacc ccccaggggg tcgtcctgca ctcgggcgac ttcaagctcg acctgcaccc
     2101 cgtcgacggc cgccgcaccg acctcgcccg gttcggggcc ctggccgccg accccggcat
     2161 ccggctgctc ctcgccgact cgaccaacgc cgaggagcc
//
LOCUS       DATGJT010000018         2696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1455019, whole genome shotgun sequence.
ACCESSION   DATGJT010000018 DATGJT010000000
VERSION     DATGJT010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455019"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VKX24_00305"
     CDS             <1..233
                     /locus_tag="VKX24_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014845458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase C-terminal domain-containing
                     protein"
                     /protein_id="HLJ06950.1"
                     /translation="ERRPIAGTITMDQLLVDLGPSDRPAAAVAEIGTEVVLLGRQGDE
                     TITAAEWAAKLGTIPYEVCCGIGERVPRRYIG"
     gene            258..1121
                     /locus_tag="VKX24_00310"
     CDS             258..1121
                     /locus_tag="VKX24_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019425863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HLJ06951.1"
                     /translation="MGAITDVRGIRVGHWTGADTGVTVVWAPAGTTGSGEVRGGAPAT
                     RETALLDPSRLVERVDAVVLSGGSAFGLAAADGVVRFLAERGQGFPTAAGPVPIVVGA
                     ALFDLPVARTPGAEEGYAAAVDAARGRPAGSGRIGAGRGATAGKWRGRQYAVAAGLGT
                     AAVTDGDATVGALVACNPLGDVIGPDGEVLAGATGAPSGAPAFPAPTPFEHTTLVVVA
                     TDARVGKAECLLLAQSAQDGLAQAIRPAHTRYDGDFAAVLATGAVDAHPDRLRVAATE
                     AVAAAVRAAVR"
     gene            1234..1737
                     /gene="tsaE"
                     /locus_tag="VKX24_00315"
     CDS             1234..1737
                     /gene="tsaE"
                     /locus_tag="VKX24_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013809636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HLJ06952.1"
                     /translation="MKVVSRSVEETRALGEELGRGVLRAGDVVVLSGELGTGKTALAQ
                     GVGRGLDVDGPVVSPTFTLVREYEGRIRLCHVDVYRLERVQEFHELGIEEQLEESVTL
                     IEWGEVAGSALPADRLEVRLTAGAGPDERIIELVPLGESWRQRGRRLGEIVEARASDE
                     DHRIPEG"
     gene            1744..2439
                     /gene="tsaB"
                     /locus_tag="VKX24_00320"
     CDS             1744..2439
                     /gene="tsaB"
                     /locus_tag="VKX24_00320"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HLJ06953.1"
                     /translation="MLLLCLDTATPQVGVAIGSDDQVVGRVQLARPQHHAEHLAPAIA
                     FLLEQLDVSLDQLSAIGVGIGPGLFTGLRVGVTTAKVMAQALRIPLIPVPSLDLLAFE
                     VRYSDRLVVPALDARRGEVFYSTYRQVPGGVQRLSDYEVGSPADLCAELMSRSDEVLL
                     LGDGAIRYREEFYDLERVEFGPPALSYPSVAALVELARAKFQREDFAQPRDVHPLYLR
                     LSDAELNWVKQTR"
     gene            2439..>2696
                     /locus_tag="VKX24_00325"
     CDS             2439..>2696
                     /locus_tag="VKX24_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-protein-alanine N-acetyltransferase
                     RimI"
                     /protein_id="HLJ06954.1"
                     /translation="MMAADLEPAELDVRLLAMRRRHLRSVLRIESKVYPVPWSMSLFL
                     SELALRSTRAYYVAFVGRQVVGYAGLMMTLDDGHVTTIAVDP"
BASE COUNT          315 a         1000 c         1008 g          373 t
ORIGIN      
        1 gggagcgccg gccgatcgcc gggacgatca cgatggacca gctgctcgtg gatctcggac
       61 cgtccgaccg ccccgcggcg gcggtggccg agatcggcac cgaggtcgtc ctcctcggcc
      121 ggcagggtga cgagacgatc accgccgccg agtgggcggc aaagctcggg acgatcccct
      181 acgaggtctg ctgcggcatc ggggagcgcg tcccccgccg ctacatcggc tgagcccgcc
      241 ggccgggggc gacccgcgtg ggtgcgatca ccgacgtccg aggtatcagg gtcggccact
      301 ggaccggcgc cgacaccggc gtcaccgtcg tgtgggcgcc ggccggcacc accggctcgg
      361 gcgaggtccg gggcggggcg cccgcgacgc gggagaccgc cctgctcgat ccgtcccggc
      421 tggtcgagcg cgtcgacgcc gtggtgctct ccggcggttc ggccttcggg ctggccgcgg
      481 cggacggcgt cgtccggttc ctggccgagc ggggtcaagg ctttccgacc gcggccgggc
      541 ccgtccccat cgtcgtcgga gcggcgctgt tcgaccttcc ggtggcccgg accccgggcg
      601 ctgaggaggg gtacgccgcc gccgtcgacg ccgcccgggg ccggccggcc ggttccggcc
      661 ggatcggggc ggggcggggc gccacggccg ggaagtggcg gggccggcag tacgccgtgg
      721 cggccgggct cggcaccgcc gccgtcaccg acggcgatgc caccgtcgga gccctggtgg
      781 cctgcaaccc gctcggcgac gtgatcgggc ccgacggcga ggtcctggcc ggggccacgg
      841 gcgcgccgtc cggcgctccg gccttcccgg cgccgacgcc gttcgagcac accacgctgg
      901 tcgtggtggc caccgacgcc cgggtcggga aggccgagtg cctgctgctg gcccagtcgg
      961 cccaggacgg cctcgcccag gcgatccgtc cggcccacac ccgctacgac ggcgacttcg
     1021 ccgccgtgct ggccaccggc gccgtcgacg cccaccccga ccggctgcgg gtggcggcga
     1081 ccgaggccgt cgccgctgcg gtccgggccg ctgtgcggta atctcagggg tccgtcaaac
     1141 ggccccttcc gggtctcctg accagccacc ggaggcctcg ctgctctcct ttccgaccgg
     1201 tcccgggcgc cccgcgcgcc gggtgcggat cccatgaagg tcgtcagccg ttccgtcgag
     1261 gagacccggg ccctgggcga ggagctgggg cgcggcgtcc tgcgggcagg cgacgtcgtg
     1321 gtgctctccg gcgaactcgg caccggcaag acggcgctgg cccagggcgt cgggcgcggg
     1381 ctcgacgtcg acggcccggt ggtgagcccg acgttcacgc tcgtccggga gtacgagggg
     1441 cgcatccgcc tctgccacgt cgacgtctac cggctcgagc gggtccagga gttccacgag
     1501 ctcggcatcg aggagcagct cgaggagagc gtcacgttga tcgaatgggg cgaggtggcc
     1561 ggcagcgcgc tgccggcgga ccggctcgag gtgcgcctca ccgccggtgc cggccccgac
     1621 gaacggatca tcgagctggt gccgctgggc gaatcgtggc gacagcgcgg ccgtcggctg
     1681 ggcgagatcg tcgaggcccg cgcctccgac gaggaccacc ggatcccgga gggctgacgc
     1741 gccgtgctcc tgctctgtct cgacacggcc acgcctcagg tgggagtggc catcggctcc
     1801 gacgaccagg tcgtcggccg ggtgcagctg gcccgtccgc agcaccacgc cgagcacctg
     1861 gcgccggcca tcgccttcct gctggagcag ctcgacgtgt cgctcgacca gctgtcggcc
     1921 attggcgtcg ggatcggccc ggggctcttc accgggctgc gggtcggcgt gacgacggcc
     1981 aaggtgatgg cccaggcgct gcggatcccg ctgatccccg tccccagcct cgacctgctg
     2041 gccttcgagg tccgctacag cgaccggctg gtcgtcccgg ctctcgacgc ccgccggggc
     2101 gaggtcttct actccaccta ccgccaggtg ccgggcggcg tgcagcgcct ctcggactac
     2161 gaggtcggct ccccggccga cctgtgcgcc gagctcatgt cccgcagcga cgaggtcctg
     2221 ctgctcggcg acggggcgat ccgctaccgg gaggagttct acgacctgga gcgggtggag
     2281 ttcggcccgc ccgcactgtc ctatcccagc gtggcggcgc tggtggagct ggcccgggcc
     2341 aagttccagc gggaagactt cgcccagccc cgcgacgtgc acccgctcta cctccggctg
     2401 tcggacgccg agctcaactg ggtgaagcag acccgctgat gatggccgcc gacctcgaac
     2461 ccgccgaact cgacgtccga ctcctggcca tgcggcggcg gcacctgcgc tcggtgctgc
     2521 gcatcgagtc gaaggtctat ccggtgccgt ggagcatgtc gttgttcctc tcggagctgg
     2581 cgctgcgctc gacgcgggcc tactacgtcg ccttcgtggg ccggcaggtc gtcggctacg
     2641 ccgggctgat gatgacgctc gacgacggcc acgtgaccac catcgccgtc gacccc
//
LOCUS       DATGJT010000019         3080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1143552, whole genome shotgun sequence.
ACCESSION   DATGJT010000019 DATGJT010000000
VERSION     DATGJT010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143552"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..760)
                     /locus_tag="VKX24_00330"
     CDS             complement(26..760)
                     /locus_tag="VKX24_00330"
                     /inference="COORDINATES: protein motif:HMM:NF016163.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF429 domain-containing protein"
                     /protein_id="HLJ06955.1"
                     /translation="MQGRPNHNAQQHLRKGAPVPYRPLAGVEPCAKGWFVVPGKLQGV
                     SLFPEPPQVLPTITDVLDTRPSYEIIALHAPIGLPGDRIQGGRACDRQARKLLGTRRG
                     SAVTAPPSRSDVYDASGEGLSAVVRAQLRRIREVQRDVASYHQRTVFEVHPELGFFQL
                     NEDVPLRYGKRTHLGIEERLSLLRARMPGLERVLDNIPDGVRLPTVLDACVDLWTARR
                     IAARAVSRLPEVPEWNEDGLRMELVR"
     gene            complement(762..1871)
                     /locus_tag="VKX24_00335"
     CDS             complement(762..1871)
                     /locus_tag="VKX24_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018566680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HLJ06956.1"
                     /translation="MSEPLTSNPPAAEWLEVLLSYLWERRGTDLHLTAGSAPLARVDG
                     ELHAVPDQPVLTPADTDALAETLLDENDRATFGQRGDVDFAFGFNHLARIRGSAYAQR
                     GSTTLALRMIPSRVPEMDELGLPEAVQQMVDAPSGLILVTGPTGSGKSTTMASMVDHI
                     SRTRFSHILTIEDPIEYVFRHGHGAVNQREVGKDTESFARGLRSALREDPDILMVGEM
                     RDLESIDTVLTLAETGHLVIATLHTNDTTQAVDRLVGVFPGDQQNQARLQLSASLVGV
                     IYQRLLPRREGGLVAGYEVLKGTIAVRNLIRESNTRQLRNAITMGQADGMQTLEMHLS
                     ELVTAGVVDRDEAVHRSLYPKEIARPQPVPATVGV"
     gene            2011..>3080
                     /locus_tag="VKX24_00340"
     CDS             2011..>3080
                     /locus_tag="VKX24_00340"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching enzyme"
                     /protein_id="HLJ06957.1"
                     /translation="MDVWPGQPGPLGATYDGTGTNFAVYSEAAERVELCLFDEDGNEK
                     RVDLPEVTSCCWHGHLPGVGPGQRYGFRVSGPWEPAAGHLANPTKLLLDPYAGAVWGD
                     VVADPALYAHAPGDPATPSELDSAAVVPKAVVVDPWFDWSGDQPPSTSAAQTVIYEAD
                     VRALTLHHPDVPEELRGGYAALAHPAVVGHLTRLGVTAVNLRSVQQFVPETAETDGAA
                     RAGGGARAPRLRGGVLAFFAPHNGFGAWAGPGQPAQEFRHMVKALHGAGIEVLVDVAF
                     DGTAEAGADRVALSLRGIDNAVYYGAPAGEAALDLGHPAVLRLVMDSLRHWVEVLHVD
                     GFRFRPAPSGAGALAALAGVLG"
BASE COUNT          399 a         1067 c         1177 g          437 t
ORIGIN      
        1 gactgggcga tcgggtcaca tggacctaac ggacgagctc catgcgcagc ccgtcctcgt
       61 tccactccgg cacctcgggg aggcgggaca cggcccgggc ggcgatgcgc cgggcggtcc
      121 acaggtcgac gcaggcgtcg agcacggtcg gcagccgcac gccgtcggga atgttgtcga
      181 gcacccgctc caggccgggc atccgggccc gcagcagcga gaggcgctcc tcgatcccga
      241 ggtgcgtccg cttgccgtag cgcagcggca cgtcctcgtt gagctggaag aagccgagct
      301 ccggatggac ctcgaagacg gtgcgctggt ggtaggaggc gacgtcgcgc tgcacttccc
      361 ggatccgccg cagctgggcc cgcaccaccg ccgaaaggcc ctcgccggag gcgtcgtaga
      421 cgtcggaccg gctcgggggg gcggtcaccg ccgagccccg gcgggtgccg aggagcttgc
      481 gggcctgtcg gtcgcaggcc cgtccgccct gaatgcggtc gcccggcagc ccgatcgggg
      541 cgtggagggc gatgatctcg taggacgggc gggtgtcgag gacgtcggtg atggtcggca
      601 gcacctgcgg cggctcggga aacagcgaca cgccctgcag cttgccggga acgacgaacc
      661 atcccttggc gcacggttcc accccggcca gcggccggta ggggaccggt gcgcccttgc
      721 ggaggtgctg ttgagcgttg tggttcgggc ggccctgcat ctcagacgcc caccgtcgcc
      781 ggcaccggct gcggccgggc gatctccttg ggatacaggc tgcggtggac ggcctcgtcc
      841 cggtcgacga cgccggcggt gacgagctcg gagaggtgca tctcgagcgt ctgcatcccg
      901 tcggcctggc ccatcgtgat ggcgttgcgg agctggcggg tgttgctctc ccggatcagg
      961 ttccgcaccg cgatggtgcc cttgaggacc tcgtagcccg ccaccaggcc gccctcccgg
     1021 cggggaagga gccgctggta gatgacgccg accagcgacg ccgacagctg caggcgggcc
     1081 tggttctgct ggtcgccggg gaacacgccg acgagccggt cgacggcctg ggtcgtgtcg
     1141 ttggtgtgga gggtggcgat caccaggtgg ccggtctcgg ccagggtgag aaccgtgtcg
     1201 atcgactcca ggtcgcgcat ctcgccgacc atgaggatgt cggggtcctc ccggagggcg
     1261 gagcgcaggc cccgggcgaa ggactcggtg tccttgccga cctcccgctg gttcacggca
     1321 ccatggccgt ggcggaagac gtactcgatc gggtcctcga tggtgaggat gtgggagaac
     1381 cgggtgcggc tgatgtggtc gaccatcgag gccatcgtcg tcgacttgcc cgatccggtc
     1441 ggcccggtga cgaggatgag ccccgacggg gcgtcgacca tctgctggac ggcctcggga
     1501 aggccgagct cgtccatctc cgggacgcgg gaggggatca tccgcagggc cagcgtcgtc
     1561 gagccccgct gggcgtaggc gctgccccgg atccgggcca gatggttgaa gccgaaggcg
     1621 aagtcgacgt cgccccgctg cccgaaggtg gcgcggtcgt tctcgtcgag gagggtctcg
     1681 gcgagggcgt cggtgtcggc cggcgtgagg acgggctggt cggggacggc gtgcagctcg
     1741 ccgtcgaccc gggccagcgg ggcggaaccg gcggtgaggt ggaggtcggt gccgcggcgc
     1801 tcccagaggt aggagagcag cacttccagc cactcggcgg ccggggggtt cgaagtcagg
     1861 ggctcgctca tgcgcgccac ggtaggaccg cggggcggaa tgtgaatccc cacatttgat
     1921 gaacagttcc cgaacgaatc tccgggccgc gagattcgtc ccccggagcg cgattcgggc
     1981 cccccgggcc gctctctaga ctctcccgcc gtggatgtct ggcccggcca gcccggcccg
     2041 ctcggggcga catacgacgg caccggcacc aacttcgccg tctactccga ggccgccgag
     2101 cgggtggagc tctgcctctt cgacgaggac gggaacgaga agcgcgtcga cctccccgag
     2161 gtgacgtcgt gctgctggca cggccacctc cccggcgtgg ggcccgggca gcgctacggg
     2221 ttccgggtgt ccgggccgtg ggagcccgcc gccgggcatc tggccaaccc caccaagctg
     2281 ctcctcgacc cctacgccgg ggcggtgtgg ggcgacgtcg tggccgaccc ggcgctctac
     2341 gcccacgccc ccggcgaccc ggccacgccg agcgagctcg acagcgccgc cgtcgtcccc
     2401 aaggcggtgg tcgtcgatcc gtggttcgac tggagcggcg accagccgcc gtcgacgtcg
     2461 gcggcccaga cggtgatcta cgaggccgac gtccgggcgc tgacgctgca ccatcccgac
     2521 gtgcccgagg agctgcgggg cggctacgcc gcgctggccc atccggcggt cgtcgggcac
     2581 ctcacccggc tgggtgtcac ggcggtgaac ctccggtcgg tgcagcagtt cgtgcccgag
     2641 acggccgaga ccgacggcgc cgcccgggcc ggcggcggcg cccgggcgcc gcgcctgcgc
     2701 ggcggagtgc tggccttctt cgctccccac aacggcttcg gcgcctgggc gggccccggg
     2761 cagccggccc aggagttccg ccacatggtc aaggcgctcc acggcgccgg catcgaagtc
     2821 ctcgtcgacg tggcgttcga cggcaccgcc gaggccggcg ccgaccgggt ggcgctgtcg
     2881 ctgcggggga tcgacaacgc cgtgtactac ggcgcgccgg cgggggaggc ggcgctcgac
     2941 ctggggcacc cggctgtcct gcggctggtg atggacagtc tgcgccattg ggtcgaagtc
     3001 ctccacgtgg acgggttccg tttccgtccg gccccgtccg gcgccggcgc cctggccgcc
     3061 ctggccggcg tcctcggcca
//
LOCUS       DATGJT010000020         3455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1351208, whole genome shotgun sequence.
ACCESSION   DATGJT010000020 DATGJT010000000
VERSION     DATGJT010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3455
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351208"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..974)
                     /gene="sat"
                     /locus_tag="VKX24_00345"
     CDS             complement(<1..974)
                     /gene="sat"
                     /locus_tag="VKX24_00345"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016353866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HLJ06958.1"
                     /translation="MSDHLIAPHGGTLVNLIAEPERAAELKAAAADWPSWDLTPRQIC
                     DLELLMNGAFSPLTTFLGRADYDSVCSQMRLADGTIWPMPITLDLPEELAQSVNGSSL
                     ALRDLEGVILAVLHVDEVWTPDREAEAQAVFGTTSVEHPGVAHLLQKTNPCYVSGRLE
                     GLALPHHYDFRTLRQTPAELRDQFQKLGWTKIVAFQTRNPMHRAHQELTLRAAKESGA
                     NLLIHPVVGLTKPGDVDHYTRTRAYQSLLPTYPHNTAALSLLNLAMRMGGPREAVWHA
                     IIRKNHGCTHFIVGRDHAGPKDRAGNSFYGPYDSQELLSKYQEEIGVQ"
     gene            complement(1217..2779)
                     /locus_tag="VKX24_00350"
     CDS             complement(1217..2779)
                     /locus_tag="VKX24_00350"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HLJ06959.1"
                     /translation="MASATQHSRRIAPAAGPRPVETSPTPAPAPAPTRAGARGSQSLR
                     RILVVLDATAVFAAWAIALTFPDGLDRPGWSHFPNLIVAIALATVAALAMIASQRLYL
                     ARVCSVRAVETVRLGRTAVLTALLLQAGERRLGIHVSLNESIGGAALCFAFLTAGRDG
                     YRAWLKAHRRAGRHSRPIVIVGANDEGFDLYHLIGNHPELGFRVCGIVGNPAEVADRS
                     YDVPWLGDLTHVVDAVRLAGANGVLVAASALPSAQLNRVVRDLLVAGVHVHLSSGIRG
                     IDVRRMRAQPMAHEPLFYLEPVSLARWQMFVKRSLDLVLAGLGLLLAAPVLAACALAI
                     KLSDKGPVFFRQQRVGQDGEPFTILKLRTMVVDAEDRLADLVERNQREGVLFKLADDP
                     RVTKIGRILRATSLDELPQLINVARGDMSLVGPRPALPIEVAQFDEELLARQRVRPGI
                     TGLWQVEARDSASFQAYQRLDLFYVENWSVSLDLAILLSTVQTVASRGIRALRKRTAP
                     AADSASVSWLLD"
     gene            3234..>3455
                     /locus_tag="VKX24_00355"
     CDS             3234..>3455
                     /locus_tag="VKX24_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06960.1"
                     /translation="MVGERPQLVTTRAGQPWVGLTTDCAIHIAHDDRTRARIRDEAER
                     LGWAARNGIPVPAVVEARPDWLVTTRAVND"
BASE COUNT          510 a         1123 c         1329 g          493 t
ORIGIN      
        1 atctggacgc cgatctcctc ctggtacttc gagaggagct cctgggagtc gtaggggccg
       61 tagaacgagt tgccggcccg gtccttgggg ccggcgtggt cgcggccgac gatgaagtgc
      121 gtgcagccgt ggttcttgcg gatgatggcg tgccacacgg cctcccgcgg cccgcccatc
      181 cgcatcgcca ggttgagcag cgacagggcg gcggtgttgt gggggtaggt cggcagcagc
      241 gactggtagg cccgggtgcg ggtgtagtgg tcgacgtcgc ccggcttcgt gagccccacc
      301 accgggtgga tgagcaggtt ggcgccgctc tccttggccg cccgcagcgt cagctcctgg
      361 tgggcccggt gcatggggtt gcgggtctgg aaggccacga tcttcgtcca cccgagcttc
      421 tggaactggt cccgcagctc ggccggcgtc tggcgcagcg tccggaagtc gtagtggtgg
      481 ggcagggcca gaccctcgag gcgacccgag acgtagcagg ggttcgtctt ctggaggagg
      541 tgggccacgc cggggtgctc gacgctggtc gtgccgaaca ccgcctgggc ctcggcctcc
      601 cggtcgggcg tccagacctc gtccacgtgg aggacggcga ggatgacgcc ctcgaggtcg
      661 cgcagcgcca gcgagctgcc gttcaccgac tgcgccagct cctcgggcag gtcgagggtg
      721 atcggcatcg gccagatggt cccgtcggcc aggcgcatct gcgagcagac gctgtcgtag
      781 tcggcccggc cgaggaacgt cgtgagcggc gagaaggcgc cgttcatgag cagttcgagg
      841 tcgcagatct ggcggggcgt caggtcccac gagggccagt cggcggcggc ggccttcaac
      901 tccgcggccc gctccggctc ggcgatcagg ttgacgaggg tgccgccatg gggggcgatg
      961 aggtgatcag acaaagtgtc cctccggggg ggatggctcg aggggggccc ggcgggcaac
     1021 tgccaacccg acggcgcgcc gaggcccttc gcgctcgcca ggatcctgaa aatgaggcta
     1081 caggcgccgc cttcgttgtc gagggggagc aaagggacgg cccgggacaa ccggttccgg
     1141 acacgcagaa agggggccgc tttcgcagcc ccccttctcg cagcaccgcc cgtccggcca
     1201 ctggagcgcc gcagcgtcag tcgagcagcc aggacaccga ggcgctgtcg gccgccggcg
     1261 ccgtccgctt gcggagggcc cggataccgc gggaggcgac ggtctggacg gtcgagagca
     1321 ggatggccag gtcgaggctg acggaccagt tctcgacgta gaacaggtcg aggcgctggt
     1381 acgcctggaa cgaggcgctg tcacgggcct cgacctgcca caggccggtg atcccggggc
     1441 ggacgcgctg gcgggcgagg agctcctcgt cgaactgggc cacctcgatc ggcagggccg
     1501 ggcgggggcc gacgaggctc atgtcgcccc gggccacgtt gatcagctgg ggcagctcgt
     1561 cgaggctggt ggcccgcagg atccggccga tcttcgtcac ccgggggtcg tcggccagct
     1621 tgaacagcac gccctcccgc tggttgcgct cgacgaggtc ggccaggcgg tcctcggcgt
     1681 cgacgaccat cgtccggagc ttgaggatcg tgaacggctc gccgtcctga cccacccgct
     1741 gctgccggaa gaacaccggg cccttgtcgg agagcttgat ggccagggcg caggcggcca
     1801 gcaccggcgc cgccaggagg aggccgaggc cggcgaggac gaggtcgagc gagcgcttga
     1861 cgaacatctg ccagcgggcc agcgagaccg gctcgaggta gaagagcggc tcgtgggcca
     1921 tcggctgggc ccgcatgcgg cggacgtcga tgccccggat gccgctggag aggtggacgt
     1981 ggacgccggc gacgagcagg tcccgcacca cccggttgag ctgggcggag ggcagggcgc
     2041 tggcggccac gagcacgccg ttggccccgg ccaggcgcac ggcgtcgacc acgtgggtga
     2101 ggtcgccgag ccaggggacg tcgtagctgc ggtcggccac ctcggccggg ttcccgacga
     2161 tgccgcagac ccggaagccg agctcggggt ggttgccgat caggtggtag aggtcgaagc
     2221 cctcgtcgtt cgcgccgacg atgacgatcg ggcggctgtg gcggccggcc cggcggtggg
     2281 ccttgagcca ggcccggtac ccgtcgcggc cggcggtgag gaaggcgaag cacagggcgg
     2341 cgccgccgat cgactcgttg agcgagacgt ggatcccgag gcggcgctcg ccggcctgga
     2401 ggaggagggc ggtgaggacg gcggtgcggc cgaggcggac ggtctccacc gcccggacgc
     2461 tgcagacccg ggcgaggtag aggcgctggg aggcgatcat cgccaacgcc gccacggtgg
     2521 ccagggcgat ggcgacgatc aggttcggga agtgcgacca cccggggcgg tcgagcccgt
     2581 cggggaaggt gagggcgatg gcccaggcgg cgaacaccgc cgtggcgtcg agcaccacca
     2641 ggatgcggcg cagcgactgc gatccccgcg cgccggcccg tgtcggcgcc ggagccggag
     2701 ccggagtcgg cgacgtctcg accggccgcg gccctgccgc cggcgcgatc cgtcgcgagt
     2761 gttgcgtggc ggatgccacc cagtcacctc cgtagttggt cgtcattccc cagacatgac
     2821 ggcccaccgg acatccggac cggccaggag gcctgtcgtg cgatgctgtc gtccttcggg
     2881 cgcccccttg tacggaaggc ggtcgggcag attggcccgc ctccccacgt attgtttacg
     2941 cagagtggtc gaaccccagc tcggccgtct cgagtacccg gtgatgaatg aacgcttacg
     3001 gtccacgttc atgacgcaat tcggaagaca aggtggatcg gcgggcattg ctttggccgc
     3061 ggcgacgggg ggacgggcgg caaatccccc gctgcgacgc gctcgacgca gatctgtcgt
     3121 cacgttccgt ggcccacctt tttacgccag agtgtcccat gatgacctgt ctgtcctctg
     3181 ctttcaatgt tgaagacgtg gatatagaga aagcactcgc tgaagttgcc tccgtggtcg
     3241 gtgaacggcc gcagctcgtc acgacccggg ccggtcagcc gtgggtcggt ctgacgacgg
     3301 attgcgcgat ccacatcgcc cacgacgacc gcacgcgggc ccgcatccgg gacgaggccg
     3361 aacggctggg ctgggccgcc cgcaacggga tcccggtccc ggcggtggtc gaggcccggc
     3421 ccgactggct ggtgacgacc cgggccgtca acgac
//
LOCUS       DATGJT010000021         2050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1351234, whole genome shotgun sequence.
ACCESSION   DATGJT010000021 DATGJT010000000
VERSION     DATGJT010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351234"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VKX24_00360"
     CDS             complement(<1..454)
                     /locus_tag="VKX24_00360"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HLJ06961.1"
                     /translation="MGENLRLERSGHVAVATLDRPEKLNALSGALSAELLEMCAEVDA
                     DDDVWALVITGAGRGFCSGVDLSGAGRRPPISEQSHTQRLDELGWVGRQALGISGIAK
                     PTIAAVNGVAAGAGMSLALACDMRTGDSRSRFRTVFAERSLSPDSGMSY"
     gene            complement(471..1673)
                     /locus_tag="VKX24_00365"
     CDS             complement(471..1673)
                     /locus_tag="VKX24_00365"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HLJ06962.1"
                     /translation="MPDEEAVIVATARSAIGRANKGSLVDYRADELMAAILNALMDKV
                     PQVNKEDVVDIICGNVAQQGETGFSIARTAGILAGFPLTVPGLTLNRFCSSSLQSIRT
                     AAHAIKSGEGDIFVACGVEKSSRPPAPEGEAPAAAPRGRGIGPGGLNPKLLGRDPAFP
                     NVYIPMGMTAENVAEQYNVSREDQDAFAKLSQDRAVAAQANGIFDREISPVTKEDGTV
                     VDKDDGPRPNTTLEKLAELQPAFKEGGTVTAGNACPLNDGAAAVMVTSLSRAQQLGLK
                     PLARIVASAVGGNNPEIMGVAPIVAIPKVLEAANMKISDVDVVELNEAFAAQVLPVCR
                     ETGVDIENQLNPHGGAIALGHPFGMTGARIMTTLINDLQTLDKSIGLETMCAAGGMAM
                     AMIIERMD"
     gene            complement(1723..>2050)
                     /locus_tag="VKX24_00370"
     CDS             complement(1723..>2050)
                     /locus_tag="VKX24_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017935405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ06963.1"
                     /translation="WAYTHVELMRYSGLRLLSTLAAKKEPGPEASVNKLFWSEYHKRF
                     GNIAINLVGAQGMIRPEGPGYKTDRWQQAFLGSRAGTIFSGTSEIQHNIIGERALGLP
                     KEPVVG"
BASE COUNT          256 a          721 c          718 g          355 t
ORIGIN      
        1 agtagctcat ccccgagtcg gggctcaacg accgctcggc gaagaccgtc cggaaccggc
       61 tccggctgtc cccggtccgc atgtcgcagg ccagcgccag gctcatcccg gcgccggccg
      121 ccaccccgtt cacggcggcg atcgtcggct tggcgatccc ggagatgccc agggcctgcc
      181 ggcccaccca gcccagctcg tctagccgct gggtgtggga ctgctcggag atcggagggc
      241 gccggccggc cccgctcagg tcgacccccg agcagaaccc ccggcccgcg ccggtgatga
      301 cgagcgccca gacgtcgtcg tcggcgtcga cctccgcgca catctcgagc agctcggccg
      361 agagggcccc gctcagggcg ttgagcttct ccggccggtc gagggtcgcg acggcgacgt
      421 gccctgagcg ctccaggcgg aggttctcgc ccaccccccg gctcttccgc tcagtccatc
      481 cgctcgatga tcatcgccat cgccatgccg ccggctgcgc acatcgtctc caggccgatc
      541 gacttgtcga gggtctggag gtcgttgatg agcgtggtca tgatccgggc cccggtcatg
      601 ccgaaggggt ggccgagggc gatcgcgccg ccgtgcgggt tgagctggtt ctcgatgtcc
      661 accccggtct cccggcagac ggggaggacc tgagccgcga acgcctcgtt cagctcgacc
      721 acgtcgacgt cggagatctt catgttcgcc gcctcgagga ccttcgggat ggccacgatc
      781 ggcgccacgc ccatgatctc ggggttgttg cccccgacgg ccgaggccac gatgcgggcc
      841 aggggcttga ggccgagctg ctgggcccgg ctcaggctgg tgaccatgac cgcggccgcg
      901 ccgtcgttga gcgggcaggc gttgcccgcc gtcaccgtgc cgccctcctt gaaggcgggc
      961 tggagctcgg ccagcttctc caaggtggtg ttcggccggg ggccgtcgtc cttgtcgacg
     1021 acggtgccgt cctccttggt gaccggggag atctcacggt cgaagatccc gttggcctgg
     1081 gcggccacgg cccggtcctg gctcagcttg gcgaaggcgt cctggtcctc ccggctcacg
     1141 ttgtactgct cggccacgtt ctcggccgtc attcccatcg ggatgtagac gttcgggaac
     1201 gccgggtcgc gcccgaggag cttggggttg agcccgcccg ggccgattcc ccggccccgc
     1261 ggcgccgccg ccggcgcctc gccctcgggg gccggcggcc gggagctctt ctccacgccg
     1321 caggcgacga agatgtcgcc ctccccggac ttgatcgcgt gggccgcggt ccggatcgac
     1381 tgcaggctgg agctgcagaa ccggttgagg gtgaggcccg ggaccgtcag cgggaaaccc
     1441 gccaggatcc cggcggtgcg ggcgatgctg aacccggtct cgccctgttg ggcgacgttg
     1501 ccgcagatga tgtcgaccac gtcctccttg ttgacctggg ggaccttgtc catcagcgcg
     1561 ttcaggatgg cggccatcag ctcgtcggcc cggtagtcga cgagcgaccc cttgttggca
     1621 cggccaatgg cgctccgggc ggtcgcaacg attacggctt cttcatcggg cactctgcac
     1681 gctcctcggt tgtctgctgt cggtttggac tggttctcgg cgctacccga ccacgggctc
     1741 tttggggagc ccgagggcgc gctcgccgat gatgttgtgc tggatctcgc tcgtccccga
     1801 gaagatcgtc ccggcccggc tgcccaggaa cgcttgctgc cagcggtcgg tcttgtagcc
     1861 gggaccctcg gggcggatca tgccctgggc gccgacgagg ttgatggcga tgttgccgaa
     1921 gcgcttgtgg tactcggacc agaacagctt gttcacgctc gcctccggtc ccggctcctt
     1981 cttggcggcg agggtggaca ggagccggag ccccgagtag cgcatgagct cgacgtgcgt
     2041 gtacgcccac
//
LOCUS       DATGJT010000022         3381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1040092, whole genome shotgun sequence.
ACCESSION   DATGJT010000022 DATGJT010000000
VERSION     DATGJT010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040092"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VKX24_00375"
     CDS             complement(<1..780)
                     /locus_tag="VKX24_00375"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HLJ06964.1"
                     /translation="MAVKPERLALFEQMREDELDAAALYRSLADASEGRRRQVLSRLA
                     EAEERHARHWEHLLREAGVTQFPALKPTLRTRVLGLLARRFGADTVLPLVLRLEAADA
                     AKYRDVAEAPDTMSAEEMAHGRAVAALGGGGKGEQIARSEGRHRAAAGGALRAGVFGV
                     NDGLLSNLLLIVGVAGGTSNRNIILLAGLAGLLAGAFSMAAGEWVSVQSQRELYEREI
                     AVEREELAAFPEEELGELILIYQAKGLSDEEARALARRIMRR"
     gene            complement(805..1572)
                     /gene="truA"
                     /locus_tag="VKX24_00380"
     CDS             complement(805..1572)
                     /gene="truA"
                     /locus_tag="VKX24_00380"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HLJ06965.1"
                     /translation="MTLFDASPEQQAKLKLVVAYDGTDFHGFAVQPDVRTVAGVLGRA
                     MEKVLRHEPEISCAGRTDAGVHAWGQVVSLPCDPGVDPWRLQKALNGMLAPEVVVRSC
                     EIVAGRFDARHSARWRAYRYTVVNRPAPDPFLARYAWWVPGTLHLESMQLAADPFVGE
                     HDFAAFCRGGPPGSSTVRRVEESRWRDAGDGVYWYEVRATAFCWQMVRSIVGTLVDIG
                     TGSRRAGDVMGMLRARDRAAAGRVAPPQGLCLQEVGY"
     gene            complement(1572..1919)
                     /gene="rplQ"
                     /locus_tag="VKX24_00385"
                     /pseudo
     CDS             complement(1572..1919)
                     /gene="rplQ"
                     /locus_tag="VKX24_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009948672.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
     gene            complement(1925..2863)
                     /locus_tag="VKX24_00390"
     CDS             complement(1925..2863)
                     /locus_tag="VKX24_00390"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HLJ06966.1"
                     /translation="MLMIQRPTVEPLGEAEGNRQRFTISPLEPGFGHTLGNSLRRTLL
                     SSIPGTAVTSVRFDDALHEFDVVPGVKEDVTDIILNLKDLVLRSESPEPVILRLDKRG
                     PADVTAADIQTTADVEILNPDLHIASVNGKGRLALDITVEQGRGYLSVDRAKRSATIG
                     VIPVDSIFSPVRRVAFAVEPTRVEQATNYDRLTLDIETDGSISPKEALASAGETLRNL
                     VGLLAELSSVPRGLELGDTAVGGSTSLDLDLPIEELDLSERPRNCLKRAQIDSIGQLV
                     ERTEDDLLAITNFGQKSLEEVVQKLDERGLSLRVKE"
     gene            complement(2892..>3381)
                     /gene="rpsD"
                     /locus_tag="VKX24_00395"
     CDS             complement(2892..>3381)
                     /gene="rpsD"
                     /locus_tag="VKX24_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009306915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HLJ06967.1"
                     /translation="RIRESEYMIQLREKQKARRIYGVLEKQFRRLYEEATRQKGITGE
                     NLLRMLETRLDNVAYRAMFGASRNQARQLVRHGHVSVNGKRVTIPSYQVRKGDVVELR
                     PKAQNMIVIQHNLDTLDRTVPPWLEVDGGSRTKVTVRDLPMREHIDVPVREQLIVELY
                     SK"
BASE COUNT          463 a         1181 c         1214 g          523 t
ORIGIN      
        1 ccggcgcatg atgcggcggg ccagcgcccg ggcctcctcg tcggacagcc ccttggcctg
       61 gtagatgagg atgagctccc cgagctcctc ctcggggaag gcggccagct cctccctctc
      121 cacggcgatc tcccgctcgt agagctcccg ctgggactgc accgagaccc actcgccggc
      181 ggccatcgag aaggcgccgg ccagcaggcc ggccagcccg gccaggagga tgatgttgcg
      241 gttcgaggtg ccgccggcca cgccgacgat cagcaggagg ttcgacagga gcccgtcgtt
      301 gacgccgaag accccggccc gcagggcacc gccggccgcc gcccggtgcc ggccctccga
      361 ccgggcgatc tgctccccct tgccgccgcc gcccagggcg gccacggccc ggccgtgggc
      421 catctcctcg gccgacatcg tgtcgggggc ctcggcgacg tcgcggtact tggcggcgtc
      481 ggcggcctcc agccggagca cgaggggcag cacggtgtcg gccccgaagc gacgggccag
      541 caggccgagc acccgcgtcc gcaacgtcgg cttcaacgcc gggaactggg tgacccccgc
      601 ctcccgcagg aggtgttccc agtgacgggc gtggcgctcc tcggcctcgg ccaggcggct
      661 cagtacctgc cggcgccggc cctccgaggc gtcggccagc gaccggtaga gggcggcggc
      721 gtcgagctcg tcctcccgca tctgttcgaa gagcgccagc cgttcgggct tcaccgccat
      781 atccggcaat gtacccggac cgtttcagta ccccacttcc tgcagacaga ggccctgcgg
      841 cggggcgacc cgaccggcgg ccgcccggtc ccgggcccgg agcatcccca tcacgtcgcc
      901 ggcccggcgg gaccccgtcc cgatgtcgac gagcgttccg acgatcgacc gcaccatctg
      961 ccagcagaag gcggtggccc ggacctcgta ccagtagacg ccgtcaccgg cgtcgcgcca
     1021 gcgcgactcc tccacccgcc ggacggtgct cgacccgggg gggccgcccc ggcagaaggc
     1081 ggcgaagtcg tgctcgccga cgaacgggtc ggcggccagc tgcatcgatt ccaggtgcag
     1141 cgtccccggc acccaccagg cgtagcgggc caggaagggg tcgggggcgg gccggttgac
     1201 caccgtgtac cggtaggccc gccatcgggc cgagtgccgg gcgtcgaagc ggccggcgac
     1261 gatctcgcag gagcgcacga cgacctcggg ggccagcatc ccgttgagcg ccttctgcag
     1321 ccgccaggga tcgacgccgg ggtcgcaggg caggctcacc acctggcccc aggcgtggac
     1381 cccggcgtcg gtccgcccgg cgcagctgat ctcgggctcg tggcgcagca ccttctccat
     1441 ggcccggccg agcacgcccg ccaccgtgcg gacgtcgggc tggacggcga agccgtggaa
     1501 atccgtgccg tcgtaggcga cgacgagctt gagcttggct tgttgctcgg ggctcgcgtc
     1561 gaagagcgtc agaccagttc gatcctcgcc atcggggcgt tgtcacccgg gcgggggccg
     1621 agcttcagga tgcggagata cccgccgttg cgctcggcat agcggggggc gatgtcggcg
     1681 aagagcttgg ccgccacgtc gcggtcggtg atgacggaca tcacctgccg cttctcgtgg
     1741 agaccgccct tcttggcctt ggtgatgagc cgctcggcca tcggcttgag cagcttcgcc
     1801 cgcgacaccg tggtcacgat tccttccgag gcgaagaggt gggcggccat gttggccatc
     1861 atcagccgct gatggtcggg actcccggcg agacgaggtc ccttcttggg cgtcggcatc
     1921 ggagttactc cttcacccgc agcgacaggc cgcgctcgtc gagcttctgg acgacctcct
     1981 cgagcgactt ctgcccgaag ttggtgatgg ccagcaggtc gtcctcggtg cgctccacga
     2041 gctggccgat gctgtcgatc tgggcccgct tgaggcagtt gcggggccgt tccgagaggt
     2101 ccagctcctc gatcggcagg tcgaggtcga gcgacgtcga cccgccgacg gcggtgtcgc
     2161 cgagttccag gccccggggc accgacgaca gctcggccag cagcccgacg aggttgcgca
     2221 gcgtctcgcc ggcggaggcc agcgcctcct tgggcgagat ggagccgtcg gtctcgatgt
     2281 cgagcgtgag ccggtcgtag ttcgtggcct gctcgacccg ggtcggctcg acggcgaagg
     2341 ccacccgccg gacgggcgag aagatcgagt cgaccgggat gacgccgatg gtcgccgagc
     2401 gcttggcccg gtcgaccgag aggtagcccc ggccctgctc cacggtgatg tcgagcgcca
     2461 ggcggccctt gccgttgacg ctggcgatgt gcagatcggg attgaggatc tcgacgtcgg
     2521 cggtggtctg gatgtcggcg gcggtgacgt cggccgggcc ccgcttgtcg agccggagga
     2581 tgaccggctc gggcgactcg gagcggagca ccaggtcctt caggttgagg atgatgtcgg
     2641 tgacgtcttc cttcacgccc ggcacgacgt cgaactcgtg gagggcgtcg tcgaagcgga
     2701 cggaggtgac ggccgtcccc ggaatcgagg acagcagggt acggcggagg ctgttgccga
     2761 gcgtgtgccc gaaccccggt tcgagcggtg aaatcgtgaa gcgctgccgg ttgccctcgg
     2821 cctcgccgag cggctccacg gtcgggcgct ggatcatcag catgtgaggc gactcccgcg
     2881 gtcttactgc gctacttcga gtagagctcg acgatcagct gctcccggac ggggacgtcg
     2941 atgtgctccc gcatcggcag gtcccggacc gtgaccttcg tccggctgcc gccgtcgact
     3001 tccagccagg gcggaaccgt ccggtcgagc gtgtcgaggt tgtgctgaat gacgatcatg
     3061 ttctgcgcct tgggccgcag ctccaccacg tcgcccttcc gcacctggta ggaggggatg
     3121 gtcacccgct tgccgttgac cgacacgtgg ccgtggcgga cgagctggcg ggcctggttg
     3181 cggctggctc cgaacatcgc ccggtaggcg acgttgtcga ggcgcgtctc cagcatacgg
     3241 agcaggttct cgccggtgat ccccttctgg cgggtggcct cctcgtagag ccggcggaac
     3301 tgcttctcca gcactccgta gatgcggcgg gccttctgct tctcccgcag ctggatcatg
     3361 tactcgctct cccggatacg g
//
LOCUS       DATGJT010000023         2428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_936474, whole genome shotgun sequence.
ACCESSION   DATGJT010000023 DATGJT010000000
VERSION     DATGJT010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_936474"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2263
                     /locus_tag="VKX24_00400"
     CDS             <1..2263
                     /locus_tag="VKX24_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06968.1"
                     /translation="VVRLALGGLDAEATGVLVERIAGPGAGDALGADVHARTGGNPFF
                     VSEVARLLAMRARDKAAGARLEVPPGVRQVLSRRLARLPQATAELLCAAAVVGRPDVD
                     RLVAVTGRPADDVLLQLDDAVRARLVTASGSGFRFAHDLVREALYDELSSTGRARLHR
                     RVAEVLGDDEPAEAAAHWARAGGADAAIRAAGHALAAAEAAMAQTGYEQAVRWYRQAL
                     DGGASDVISVSVRLGEAQVLAGEPAIGRETLRQAARAAGRAGRGGDLARAVLAMGTSG
                     FEVDITDTSQVGLLDTALTLLPPGDSALRAAALARRSLVRTLSATPDARASEAADAVA
                     MAERIGDPTTEAVALAALCDALAGPDHVAERLAAAGCMLDQADASGDPLLTLLARRLR
                     LVARLEQGDLTGVDADIGASARAAERLRLPLYTWPVPVWRGMRALLDGDIPAARRFAG
                     EAEATGRQAGSANAEMMVWALRIAAARAEGTMSDQVAAIETMLPGAADYPAWHCCLAA
                     VFAEAGRAEPARRSFERVMAAGGVDAVPKDAEWIELLWHLGQAAMLLDEPAAARAVHD
                     ALAPYAHLWVVDGIGGACFGPVCDQLARLSAFLTGAVGAPGDSDEDGDRGGRAAEFRR
                     EGRLWHLRFRGRRATVADSKGMADLAALLGRPDRTCTSSTWSRRPAAPRPAPPTPEPG
                     PSSTVRPAAPIGNGSPSSKTTSPPPPPTAISDGPSGCGPSGTSSPPSSAPPSASEAGP
                     GSKGTGRNGPARL"
     gene            2266..2400
                     /locus_tag="VKX24_00405"
     CDS             2266..2400
                     /locus_tag="VKX24_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06969.1"
                     /translation="MRISTAVKAIDAVHPDLARHLRLSVSTGRFCAYRPERPTTWTTT
                     "
BASE COUNT          268 a          967 c          912 g          281 t
ORIGIN      
        1 cgtcgtccgc ctcgccctgg gcgggctcga cgccgaggcc accggcgtcc tcgtcgagcg
       61 catcgccggg ccgggggcgg gcgatgcgct cggtgccgac gtccacgccc ggacgggcgg
      121 gaacccgttc ttcgtctccg aggtcgcccg cctgctcgcc atgcgggccc gggacaaggc
      181 cgccggcgcc cggttggagg ttccccccgg cgtccggcag gtgctcagcc ggcgcctggc
      241 gcggctgccg caggcgaccg ccgaactcct ctgtgccgcg gcggtcgtcg gccggcccga
      301 cgtcgaccgg ctggtggcgg tgaccggccg cccggccgac gacgtcctcc tccagctcga
      361 cgacgccgtc cgggcccgcc tcgtgacggc gtccgggtca gggttccgct tcgcccacga
      421 cctcgtccgc gaggcgctct acgacgagtt gagctcgacc gggcgggccc ggctccaccg
      481 ccgggtcgcc gaggtgctcg gcgacgacga gccggccgaa gccgccgctc actgggcccg
      541 ggccggaggc gccgacgccg cgatccgggc cgcgggccac gccctcgccg ccgccgaggc
      601 ggcgatggcc cagaccggct acgagcaggc ggtgcgctgg taccgccagg cgctcgacgg
      661 cggggccagc gacgtcatca gtgtcagtgt ccgcctcggc gaggcccagg tgctggccgg
      721 ggaaccggcg atcggccggg agacgctgcg ccaggcggcc cgggcggcgg gccgcgccgg
      781 tcggggcggc gacttggccc gggccgtgct ggccatgggg acgagcgggt tcgaagtcga
      841 catcaccgac acctcccagg tcggcctgct cgatacggcg ctgaccctgc tcccgcccgg
      901 cgacagcgcg ctccgggctg ccgcgctcgc ccgccggtcg ctggtccgga cgctcagcgc
      961 cactcccgac gcccgggcct ccgaggcggc cgacgcggtg gccatggccg aacggatcgg
     1021 cgacccgacg accgaagcgg tcgccctcgc cgccctctgc gacgccctgg ccggtcccga
     1081 ccacgtcgcc gagcgactgg ccgccgccgg ctgcatgctc gatcaggccg acgcctcggg
     1141 cgacccgctg ctcacgctcc tcgcccgccg gctgcgcctc gtcgcccgcc tggagcaggg
     1201 tgacctcacc ggggtggacg ccgacatcgg cgcctccgcc cgcgccgccg agcggctccg
     1261 gctgccgctc tacacctggc cggtcccggt ctggcggggc atgcgggcgc tgctcgacgg
     1321 cgacatcccg gcggcccggc gcttcgccgg cgaggccgag gcaacgggcc ggcaggcggg
     1381 cagcgccaac gccgagatga tggtctgggc gctgcgcatc gccgccgccc gggccgaggg
     1441 aaccatgtcc gaccaggtgg cggccatcga gacgatgctg cccggcgccg cggactatcc
     1501 ggcctggcat tgctgcctgg ccgccgtctt cgccgaagcg ggccgagcgg aaccggcccg
     1561 ccgcagcttc gaacgcgtga tggccgccgg tggcgtcgac gccgtgccga aggacgccga
     1621 gtggatcgag ctcctctggc acctggggca ggcggccatg ctgctcgacg agcccgctgc
     1681 cgcccgggcg gtccacgacg ccctcgcccc ctacgcccat ctctgggtgg tggacgggat
     1741 cggcggggcc tgcttcggcc cggtctgcga ccagttggcc cgcctgagcg ccttcctcac
     1801 cggcgccgtc ggcgcccccg gggacagcga cgaagacgga gaccgtggcg gtcgcgccgc
     1861 cgagttccgc cgggaaggac gcctgtggca cctgcgcttc cggggccggc gggcgacggt
     1921 cgccgactcc aagggcatgg ccgacctggc cgcgctgctc gggcggccgg acaggacgtg
     1981 cacgtcctcg acctggtcga ggcggccggc ggccccccgg ccggcgccgc cgacgccgga
     2041 accgggcccg tcctcgaccg tgaggcccgc cgcgcctatc gggaacggct cgccgagctc
     2101 gaagacgacc tcgccgccgc caccgccgac cgcgatctcg gacgggccga gcggctgcgg
     2161 gccgagcggg acttcctcgc cgccgagctc ggcgccgccc tcggcctcgg aggccgggcc
     2221 cgggtcgaag gggaccggac ggaacgggcc cgcaaggctg tgaccatgcg gatctccacc
     2281 gcggtcaagg cgatcgacgc cgtccatccc gacctggccc ggcacctccg cctgtcggtc
     2341 tccaccggac ggttctgcgc ctaccggccg gagcggccga ccacctggac gacgacctga
     2401 gggagctcgc cggccggtgt gacatcgt
//
LOCUS       DATGJT010000024         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_729009, whole genome shotgun sequence.
ACCESSION   DATGJT010000024 DATGJT010000000
VERSION     DATGJT010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729009"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VKX24_00410"
     CDS             <1..658
                     /locus_tag="VKX24_00410"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HLJ06970.1"
                     /translation="YTSVLSPEHAAAIEASEGEPSLHDHLERWLRRTPFLSFGGFDFW
                     KAYREAVSEMLARDRAVIESHPQLDAEGRAAALAEFGHTMAAFEAVFDANKWAELVRA
                     GKRRLSHRAFLAALLINLYRDEPIFQLPFRFLTTLVDIDEAFTAWRQRHVLLAHRMIG
                     GRIGTGGTAGHEYLAAAARHHRIFNDLFDLPTYLIPRSARPPLPTEVAEQMGFRYGQS
                     "
     gene            655..1842
                     /locus_tag="VKX24_00415"
     CDS             655..1842
                     /locus_tag="VKX24_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLJ06971.1"
                     /translation="MTAPGPGGVPREGLAEHFGRFLGAVPGRLHFAAHSHHPWPDATF
                     GAQQQAWLDAARLIDDKWDEVFGAVLPEAAGHICRRLGLSDPEAIAFAPSTHALVMRL
                     LSVLEPPVRILTTDAEFHSFARQAARLEEDGLAGVERVPAEPFASFPERFAAAAGRGG
                     HDLVYLSQVFFNSGYVVPDLGALVAAVPDPEALVVIDGYHGFMAVPTDLAAVGHRAFY
                     LAGGYKYAMAGEGACFAHCPPGYATRPRDTGWFAGFADLEGAAGGKVAYAAGGGRLLG
                     GTFDPTGVYRLNAVQRWLDALGVAVADIHEHVAALQARFLAAAPHPELVPGADFAERG
                     HFLTFRFPDPGRAAAVDAALHAAGVVVDHRHDRLRIGFGVYHDEADVEELLRHLSTVP
                     GWP"
BASE COUNT          244 a          807 c          704 g          288 t
ORIGIN      
        1 ctacaccagc gtcctgtcgc cggagcacgc cgcggccatc gaggcctcgg agggggagcc
       61 gtcgctccac gaccacctcg agcgctggct gcggcgcacg ccgttcctgt ccttcggcgg
      121 cttcgacttc tggaaggcct accgggaggc ggtgagcgag atgctggccc gcgaccgggc
      181 cgtcatcgag tcgcaccccc agctcgacgc cgaggggcgg gccgccgccc tcgccgagtt
      241 cggccacacc atggcggcct tcgaggcggt gttcgacgcc aacaagtggg ccgagctcgt
      301 gcgggccggg aagcgccggc tgagccaccg ggccttcctg gccgccctgc tgatcaacct
      361 ctaccgggac gagccgatct tccagctgcc gttccggttc ctcaccaccc tggtcgacat
      421 cgacgaggcg ttcaccgcct ggcgccagcg gcacgtgctg ctggcccacc ggatgatcgg
      481 cggccggatc ggcaccggcg gcaccgcggg tcacgagtac ctggccgccg ccgcccgcca
      541 ccaccggatc ttcaacgacc tcttcgacct gccgacgtac ctgatccccc gctcggcccg
      601 tccgccgctg ccgacggagg tggcggagca gatggggttc cggtacgggc agtcgtgacg
      661 gcccccgggc cggggggcgt cccccgagaa ggcctggcgg agcacttcgg ccggttcctc
      721 ggcgccgtcc ccggccggct gcacttcgcc gcccacagcc accacccctg gccggacgcc
      781 accttcgggg cccagcaaca ggcctggctc gacgccgccc gcctgatcga cgacaagtgg
      841 gacgaggtct tcggcgccgt cctgcccgag gccgccggcc acatctgccg ccggctgggg
      901 ctgtccgacc cggaggcgat cgccttcgcc cccagcaccc atgccttggt gatgcggctg
      961 ctgtcggtgc tcgagccgcc ggtgcggatc ctcaccaccg acgccgagtt ccacagcttc
     1021 gcccgccagg ccgcccggct cgaggaggat ggattggccg gcgtggagcg cgtcccggcc
     1081 gagccgttcg cctcgttccc cgagcgcttc gccgccgccg ccgggcgggg cggtcacgac
     1141 ctcgtctacc tgtcgcaggt gttcttcaac tccggctacg tcgtccccga cctgggcgcc
     1201 ctggtggccg ccgtacccga cccggaagcg ctggtggtca tcgacggcta ccacgggttc
     1261 atggccgtgc cgaccgacct cgccgccgtc gggcaccggg ccttctacct ggccggcggc
     1321 tacaagtacg ccatggccgg ggagggcgcc tgcttcgccc actgcccgcc gggctacgcc
     1381 acgaggcccc gcgacaccgg ctggttcgcc ggcttcgccg acctcgaggg ggccgccgga
     1441 gggaaggtgg cctacgccgc cggcggcggg cggctcctgg gcgggacgtt cgaccccacc
     1501 ggggtgtacc ggctcaacgc cgtgcagcgc tggctcgacg ccctcggcgt ggcggtggcc
     1561 gacatccacg aacacgtcgc cgcgctgcag gcccgcttcc tggccgccgc cccccacccc
     1621 gagctcgtcc cgggggcgga cttcgccgaa cgcggccact tcctcacctt ccgcttcccc
     1681 gatcccggcc gggccgccgc cgtcgatgcc gccctccacg ccgccggggt cgtggtcgac
     1741 caccgccacg accggctccg catcggcttc ggggtctacc acgacgaggc cgacgtcgag
     1801 gagctcctcc gacacctgtc gacggtcccc ggctggccat aatgggtaac ccgccggatg
     1861 acgggacgat cgggagggcc gatgcggagc cggggtgcca tggggacggg agtgctggcc
     1921 gcgctctgtc tcgtcgccct gcgcccggcc ggccccgcct gggggatcgg atttccaggc
     1981 gaggcgccgg tcgcctgctc cttcgagctc catgacacgg ccacgccggg gtggatgatc
     2041 acg
//
LOCUS       DATGJT010000025         2424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_729271, whole genome shotgun sequence.
ACCESSION   DATGJT010000025 DATGJT010000000
VERSION     DATGJT010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729271"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..606
                     /locus_tag="VKX24_00420"
     CDS             <1..606
                     /locus_tag="VKX24_00420"
                     /inference="COORDINATES: protein motif:HMM:NF015780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06972.1"
                     /translation="LGGPQAGVIAGRADLVAAVARHPLARAVRADKMALAALQSVALA
                     YLAGDGDAIPLWRMAATPVSALRARAEALAAQVPGAKVVDTEAVAGGGSLPGLTIPSV
                     GLAIEVDDADAALAAIRATGIVARVDNDALVLDLRTVDPDDDNRLATALSAQRVDPAR
                     RRTGAPSAPSTEGCGDSVDGAPVRPPQAPVRPPRAPGPDEV"
     gene            603..2402
                     /gene="selB"
                     /locus_tag="VKX24_00425"
     CDS             603..2402
                     /gene="selB"
                     /locus_tag="VKX24_00425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HLJ06973.1"
                     /translation="MRVVATAGHVDHGKSSLVLALTGTDPDRWPEEKTRGLTIDLGFA
                     FTTLPSGQQLGFVDVPGHVRFLKNMLAGVGAVEAAILVVAATEGWMPQSEEHLRILDL
                     LGISHGLAVITKADLVDDDLLQLARLEVEERLTEAASFTPTEVLAVDSRSGRGLPELR
                     VALDAMLAAAPLALDRGRPRLWVDRVFAAKGAGTVVTGTMAGGTLPLDAEVLILPGRR
                     RARIRHIESHHEELAEAGPGRRVALNLAGVDHTELTRGSALVLADQWAVTAVVDAVLT
                     ALPEITLRQGAYKAYIGSGEHDVGLRLIPSSGDGPRFGRLRLAVALPLEPGDRIVLRD
                     SGSQTTVGGAEVLDVAPVGRARLAAARLPLAPGPRLLAGRPWLRPSDIGPLAGVGAGE
                     AKQLAEDLVRSGAARPAGEHLVAAEVLADVRRRALDLTADHHRTHPLEPGLDLPALAA
                     ALGLDAARARAALEGTEGLVLEQGRARLASHRGRVAGEPEAQRLLAALDAVPFSPPAP
                     AEVGGSAEIVRGLLREGLLVDLDGTIFTAAAVEKARQVVREGFERHGSLTVAQARDLL
                     GSSRKYVLAILAHFDAVGVTRRRGDERLPGPRL"
BASE COUNT          284 a          962 c          889 g          289 t
ORIGIN      
        1 ctcgggggtc cccaggccgg cgtcatcgcc ggccgggccg acctcgtggc ggcggtggcc
       61 cgccaccctc tggcccgggc ggtccgggcc gacaagatgg ccctggccgc cctgcagtcg
      121 gtggcgctgg cctacctggc cggcgacggc gacgccattc ccctgtggcg catggcggcg
      181 acgccggttt cggccctccg ggcccgggcg gaggcgctgg cggcgcaggt gccgggggcc
      241 aaggtggtcg acaccgaggc ggtggccggc ggcgggtcgc tcccgggcct gacgatcccc
      301 tccgtcggcc tggcgatcga agtagacgac gccgacgccg ccctagccgc catccgagcc
      361 accggcatcg tcgcccgcgt tgacaacgat gcacttgtcc tcgacctccg aaccgtagat
      421 cccgacgacg acaaccgcct cgccacggcc ctctccgccc aacgcgtcga tcccgcccga
      481 aggaggacgg gcgccccctc ggcgccgtcg actgaggggt gcggagacag cgtcgacggg
      541 gcgcccgtcc gaccgccaca ggcgcccgtc cgaccgccaa gggcaccagg ccccgacgag
      601 gtatgagggt cgtcgccacc gcgggccacg tcgaccacgg caagtcgtcg ctagtgctgg
      661 cgctgaccgg gaccgacccc gaccgctggc cggaggagaa gacccggggc ctgaccatcg
      721 acctcggctt cgccttcacc accctgccgt ccggccagca gctggggttc gtcgacgtgc
      781 ccgggcacgt ccggttcctc aagaacatgc tggccggggt cggggcggtg gaggcggcga
      841 tcctcgtcgt ggcggccacc gaggggtgga tgccccagag cgaggagcac ctccgcatcc
      901 tcgacctgct cggcatctcc cacggcctcg ccgtgatcac caaggccgac ctggtcgacg
      961 acgacctcct gcagctagcc cggctcgagg tcgaggagcg cctcacggag gcggcctcgt
     1021 tcaccccgac cgaggtgctg gccgtcgact cccgctccgg ccgggggctg cccgagctgc
     1081 gagtggcgct ggacgcgatg ctggccgccg caccgctggc cctcgaccgg ggccggccgc
     1141 ggctgtgggt cgaccgggtc ttcgccgcca agggcgccgg caccgtggtg acgggaacga
     1201 tggccggcgg gacgctgccg ctcgacgccg aggtcctcat cctgcccggc cgccggcggg
     1261 cccgcatccg acacatcgag agccaccacg aggagctggc cgaggccggg ccggggcgcc
     1321 gggtggcgct caacctggcc ggcgtcgacc acaccgaact gacccggggc tcggcgctcg
     1381 tcctcgccga ccagtgggcc gtgaccgccg tggtcgacgc cgtcctcacc gccctcccgg
     1441 agatcacact ccgccagggc gcctacaagg cctacatcgg ctcgggagag cacgacgtcg
     1501 gcctccggct cattccatcc agcggcgacg ggccgcggtt cggccggctc cggctcgccg
     1561 tggcgctgcc gctcgagccc ggcgaccgca tcgtcctgcg ggactcgggc agccagacga
     1621 ccgtcggcgg ggccgaggta ctcgacgtcg cccccgtcgg acgggcccgc ctggccgccg
     1681 cccggctgcc cctggcgccc ggtccccggc tgctggccgg ccgcccctgg ctgcgcccgt
     1741 ccgacatcgg gccgctggcc ggggtcggag ccggggaggc gaagcaactg gccgaggacc
     1801 tcgtccgctc cggcgccgcc cgtccggcgg gggagcacct ggtggccgcc gaggtcctgg
     1861 ccgacgtccg ccgccgggcg ctcgacctca ccgccgacca ccaccggacc cacccgctgg
     1921 aaccggggct cgacctgccg gccctggccg cggcgctcgg gctcgacgcc gcccgggccc
     1981 gggcggcgct cgagggcacg gagggcctcg tcctcgagca agggcgggcc cgactcgctt
     2041 cccaccgggg ccgggtcgcc ggggagccgg aggcgcagcg gctgctggcg gccctcgacg
     2101 ccgtgccgtt ctcgccgccc gcgccggcgg aggtgggcgg atcggcggag atcgtccggg
     2161 ggctgctgcg ggagggtctg ctcgtcgacc tcgacggaac catcttcacc gccgccgccg
     2221 tcgagaaggc gcgccaggtc gtccgggaag gcttcgagcg tcacggctcg ctgaccgtcg
     2281 cccaggcccg cgatctcctg ggatcgtccc ggaagtacgt cctggcgatc ctggcccact
     2341 tcgacgccgt gggcgtcacc cgccggcggg gagacgagcg cctgcccggc ccgcggctct
     2401 agccggcgcc gcctcacccc gccc
//
LOCUS       DATGJT010000026         2659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1351719, whole genome shotgun sequence.
ACCESSION   DATGJT010000026 DATGJT010000000
VERSION     DATGJT010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351719"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /locus_tag="VKX24_00430"
     CDS             complement(<1..1046)
                     /locus_tag="VKX24_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012187968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLJ06974.1"
                     /translation="MTDTLDVAAMKKDFPVLSQTVHGNRLVYLDSAASSQHPQVVLDA
                     MDDYYATTHANVHRGVYALAEEADRRYEAARIAVGRFLRAPNPEVEVLFVKNATEAIN
                     LVASTWGRANLHEGDAVLLTDMEHHANLVPWLMLAEERGVELRWIGLGDDYRLDLSDL
                     DRLVDGVKLVACTTMSNVLGTIPDFARIAEAAHGAGAVVVADAAQSVPHLPTEIAALG
                     CDFLAFSAHKMLGPTGIGVLWGRAELLEAMPPFLGGGGMIRDVRRDGFSPNVLPWKFE
                     AGTPPIAEAIGLAAAIGYLEGLGMDRVRGHEMSLVSYALDTLGRRFGDDLRIFGPPAG
                     PDRGGVLSLAYRDV"
     gene            complement(1043..1789)
                     /gene="sufC"
                     /locus_tag="VKX24_00435"
     CDS             complement(1043..1789)
                     /gene="sufC"
                     /locus_tag="VKX24_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020373321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HLJ06975.1"
                     /translation="MTTPLLEVSDLHVAVDGHEILRGIDLEVPEGEVHALMGPNGSGK
                     STLANTLLGGPTYQVTSGTVRLRGEDITAWAPDARAKAGMFLAFQYPEEISGVSVTQF
                     LRQAMSARSGEERSALEVRMALMEWMERLGMDPAFAERYLNQGFSGGEKKRNEILQMA
                     LLQPDLAVLDETDSGLDVDALGVVASGVQAVRQARPKLGVLLVTHYTKVLELLRPDVV
                     HVLVDGRIVARGGEELAGQLEEEGYEAWRR"
     gene            1886..>2659
                     /locus_tag="VKX24_00440"
     CDS             1886..>2659
                     /locus_tag="VKX24_00440"
                     /inference="COORDINATES: protein motif:HMM:NF026092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HLJ06976.1"
                     /translation="MSDPWNFTGKVALPGQSGDTTTLVEESTFAISSRGGDLTAPGPQ
                     GLFVRDTRILSRFELLVNGERPEPLAAAGEEPFSAVFVTRLQPRPGRADSTLMVFRAR
                     YVGQGMREDLVIRNFADEATFCSVELFFDSDFADLFAVKEGRRAELEGDITREPGRDQ
                     VEVTYRRGTVHRGVVLRFSPAPTKLGADIATFEVIVPARGEWRACIEVHPVIEGKVID
                     PRYLCGQPVERGAPSERLAKWRRQVPQVDTDHEALGSVLA"
BASE COUNT          389 a          938 c          936 g          396 t
ORIGIN      
        1 tggacgtcgc ggtaggcgag cgacagcacg ccgccccggt cgggaccggc cggagggccg
       61 aagatgcgca ggtcgtcgcc gaagcgcctc ccgagcgtgt cgagcgcgta cgacacgagg
      121 gacatctcgt gcccgcgcac ccggtccatg ccgaggccct ccaggtagcc gatggcggcg
      181 gccaagccga tggcctcggc gatgggcggc gtgccggcct cgaacttcca cgggagcacg
      241 ttggggctga agccgtcgcg tcgtacgtcg cggatcatcc ccccgccccc gaggaaaggc
      301 ggcatggctt cgagcagctc tgcccgcccc cacagcaccc cgatgccggt cgggccgagc
      361 atcttgtggg cgctgaaggc gaggaagtcg cacccgagcg cggcgatctc cgtgggcagg
      421 tgcggcaccg actgggcggc gtcggccacc accaccgccc cggcgccgtg ggccgcctcg
      481 gcgatgcggg cgaagtcggg gatggtcccg agcacgttcg acatggtcgt gcaggccacg
      541 agtttcactc cgtcgaccag gcggtcgaga tcggaaaggt cgaggcgata gtcgtcgccc
      601 agtccgatcc agcgcagctc gaccccgcgc tcctcggcca gcatgagcca aggcaccagg
      661 ttggcgtggt gctccatgtc ggtgagcagc acggcgtcgc cttcgtgcag gttggcccgg
      721 ccccaggtcg aagccaccaa gttgatcgct tcggtggcgt tcttcacgaa cagcacctcg
      781 acctccgggt tgggcgccct gaggaaccgg cccacggcga tgcgggccgc ctcgtaacgc
      841 cggtcggcct cctcggcgag ggcgtacacg ccgcggtgca cgttggcgtg cgtggtggcg
      901 tagtagtcgt ccatggcgtc gagcaccact tgtgggtgct gggaggaggc agccgagtcg
      961 aggtacacca ggcgattgcc gtgcacggtc tgggacagca ccgggaagtc cttcttcatc
     1021 gcggcgacgt cgagggtgtc ggtcaccggc gccacgcctc gtacccctct tcctcgagct
     1081 gcccggcgag ctcctcgccg ccgcgcgcca cgatgcgccc gtcgacgagg acgtgcacga
     1141 cgtcggggcg gagcagctcg aggaccttgg tgtagtgggt gacgagcagg acgccgagct
     1201 tggggcgggc ctggcgcacg gcctgcaccc cgctggccac gacgccgaga gcatcgacgt
     1261 cgaggccgga gtccgtctcg tccagcacgg ccaggtcggg ctggagcagg gccatctgca
     1321 ggatctcgtt gcgcttcttc tcgccgcccg agaagccctg gttgaggtag cgctcggcga
     1381 aggccgggtc catgcccagg cgctccatcc actccatgag cgccatgcgc acctcgaggg
     1441 cggagcgctc ctcgcccgag cgggccgaca tggcctggcg caggaactgc gtgaccgaga
     1501 cccccgagat ctcctccggg tactggaagg ccaggaacat ccccgccttc gcccgggcgt
     1561 ccggggccca cgccgttatg tcctcgcccc gcaggcgcac ggtgccagag gtgacctgat
     1621 aggtgggacc gcccaacagg gtgttggcca gggtggactt gcccgagccg ttcgggccca
     1681 tcagcgcgtg gacttcgccc tcggggacct cgaggtcgat cccgcgcagg atctcgtgcc
     1741 cgtcgacggc cacgtgcagg tcggagacct cgagaagggg ggttgtcacg gccttcactc
     1801 tacccgcagg ggcatatttg cactatcgcc atagtggcaa tctcgaatgt gcgccggacc
     1861 ggggttccgg tagcgttcgc ccactgtgag tgacccctgg aacttcaccg gcaaggtggc
     1921 gctcccgggt cagtccggcg acaccacgac gctcgtcgag gagtccacct tcgccatcag
     1981 cagccggggc ggggacctca ccgccccggg tccgcaaggc ctcttcgtgc gcgacacgcg
     2041 catcctgtcg cgcttcgagc tgctcgtgaa cggcgagcgc cccgagccac tggcggcagc
     2101 gggcgaggag ccgttctcgg cggtcttcgt cacccggttg cagccgaggc cggggcgcgc
     2161 cgactcgacg ctcatggtct tccgggctcg ctacgtgggc cagggcatgc gcgaagacct
     2221 cgtcatccgc aacttcgccg acgaagccac cttctgctcg gtggagctct tcttcgactc
     2281 ggacttcgcc gacctcttcg ccgtcaagga gggccggcgg gccgagctcg agggcgacat
     2341 cacccgcgag ccgggacgag accaggtcga ggtgacttac cgccggggca ccgtgcaccg
     2401 cggcgtggtc ctgcgcttct cgcccgcacc caccaagctc ggcgccgaca tcgccacgtt
     2461 cgaggtcatc gtccccgccc gtggggaatg gcgcgcctgc atcgaggtgc acccggtcat
     2521 cgagggcaag gtcatcgacc cccgctacct gtgcggccag cccgtcgagc gcggggcgcc
     2581 ctcggagcga ctggccaagt ggcggcgcca ggtgccccag gtggacaccg accacgaggc
     2641 gctcggctcg gtgctcgcc
//
LOCUS       DATGJT010000027         2822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_937057, whole genome shotgun sequence.
ACCESSION   DATGJT010000027 DATGJT010000000
VERSION     DATGJT010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937057"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VKX24_00445"
     CDS             <1..663
                     /locus_tag="VKX24_00445"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HLJ06977.1"
                     /translation="PGNEWTVGRVIDELHRRGAEVVHSGKLPVHVSGHARQGELATLL
                     SVTRPRAFIPVHGEYRHLVHHAQLATSMGVPADQVLLCEDGDAVALEAGGLRRDGSVP
                     AGYLYVDGTVGDVGHGVLRDRRMLADEGVVMVVATVDLHAHVLVGTPRVVTRGWVHAP
                     EAEDLLEEAATVVAEAVSKSLADGAGDVEVLGRAVRRALGALVSERTRRRPLIVPVVL
                     AV"
     gene            complement(694..>2822)
                     /locus_tag="VKX24_00450"
     CDS             complement(694..>2822)
                     /locus_tag="VKX24_00450"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ06978.1"
                     /translation="ARTMRDRLVAEGPLGYLELPAGPGRKEAWTLWAEPVRIGPGPAV
                     GALGVARLAGERWTDGDISTVRVFAALCGSAWARASAEYQGSLDELVIGAADRLMVAT
                     SATYTETLTEILTVLAEFLRADVAFIRKNDLVAEASVMVAEYPPRAHKPDPDPLAVVP
                     FDSDPIFAALRDLKEPLIVRASENPDEYNERVKEGSGVAEFSGAAVPLLKGDMTDGAI
                     GFMQFYDAQWTQPQINALQAVASMLTQLDARIDAETRLQHLALHDDLTGLPNRRALIE
                     ELDRRLSTGRSPVAILFLDLDRFKYMNDYLGHLAGDRVLITTADRIRMSVRPGDFTAR
                     LGGDEFVVVMNGAGGELAAMSTANRLLSLVSKPLEVSAQHVSHTASVGIAMAQPGEAG
                     ALELLGNADVALFAAKTQGRNRAVMFDDVLRLEIDERTDTEMMLRDALSHGGLRLFYQ
                     PEIDMTTGKILGLEALVRCEHPERGIIPAGQFIAVAEETGLVVDLGRWVLEEACRQMQ
                     VWRDRYPGLDLLMRVNMSPAQLSSPGITEHISRCLRQSNLLGSALCLEITEHVVMQDV
                     ERAIAILDDFRTLGVRLAMDDFGTGFSSMAQLKRIPIDTLKIDMSFVIGLADDPADQA
                     IVEAIVHLGESFGLDLVAEGVENERDMAELMRLGCTRAQGFLLAKPMPAPDLDPLLWR
                     GGVDLSKLVAAAPSTNGSRAKGATRA"
BASE COUNT          372 a          957 c         1100 g          393 t
ORIGIN      
        1 ccgggcaacg agtggaccgt cggccgggtc atcgacgagc tgcaccggcg cggcgccgag
       61 gtcgtccact cggggaagct ccccgtccac gtgagcgggc acgcccgcca gggcgagctc
      121 gccaccctgc tctcggtcac ccggccgcgg gccttcatcc cggtgcacgg ggagtaccgg
      181 cacctcgtcc accacgcgca gctggccacc tcgatgggag tgcccgcgga ccaggtcctg
      241 ctgtgcgagg acggcgacgc ggtcgcgctc gaggccggcg ggctgcgccg ggacgggtcg
      301 gtgcccgccg gctacctcta cgtcgacggc accgtcggcg acgtcggcca cggtgtgctg
      361 cgcgaccggc gcatgctcgc cgacgagggt gtggtgatgg tggtggccac ggtcgacctc
      421 cacgcccacg tcctcgtggg cacgccccgg gtcgtcaccc ggggctgggt gcacgccccc
      481 gaggccgagg atctcctcga ggaggcggcg accgtcgtgg ccgaggcggt gtccaagtcc
      541 ctcgccgacg gggcgggcga cgtcgaggtg ctgggccggg ccgtccggcg ggccctcggc
      601 gcgctggtga gcgagcgcac gcggcgccgg ccgctcatcg tcccggtcgt gctcgcggtc
      661 tgagccggcc ggcccggccg gctcagaccc ggttcaggcg cgcgtggcgc ccttcgcccg
      721 ggacccgttg gtcgaggggg cggcggcgac gagcttggac aggtcgaccc cgccccgcca
      781 cagcagcggg tcgaggtccg gggcgggcat gggcttggcc aggaggaagc cctgggcgcg
      841 ggtgcagccg aggcgcatga gctcggccat gtcgcgctcg ttctccacgc cctcggcgac
      901 gaggtcgagc ccgaaggact cgccgaggtg gacgatggcc tcgacgatcg cctggtcggc
      961 ggggtcgtcg gccaggccga tgacgaagct catgtcgatc ttgagcgtgt cgatcgggat
     1021 gcgcttcagc tgggccatcg acgagaaccc ggtgccgaag tcgtccatgg ccaggcgcac
     1081 cccgagggtc ctgaagtcgt cgaggatggc gatcgcccgc tcgacgtcct gcatgacgac
     1141 gtgctcggtg atctcgaggc agagggcgga gccgagcagg ttggactggc gcaggcagcg
     1201 gctgatgtgc tcggtgatgc cgggcgagga cagctgcgcg ggggacatgt tcacccgcat
     1261 gagcaggtcg agcccggggt agcggtcgcg ccagacctgc atctgccggc aggcctcctc
     1321 gaggacccag cggccgaggt cgaccacgag gccggtctcc tcggccacgg cgatgaactg
     1381 gccggccggg atgatcccgc gctcggggtg ctcgcagcgc acgagggcct cgagcccgag
     1441 gatcttgccc gtcgtcatgt cgatctcggg ttggtagaag aggcgaaggc cgccgtggct
     1501 cagcgcgtcg cgcagcatca tctcggtgtc ggtgcgctcg tcgatctcga ggcggagcac
     1561 gtcgtcgaac atgacggcgc ggttgcggcc ctgggtcttg gcggcgaaga gggccacgtc
     1621 cgcgttgccc agcagctcga gcgcgcccgc ctcgcccggc tgggccatgg cgatgccgac
     1681 gctggccgtg tgcgagacgt gctgggcgct cacctcgagc ggcttggaga cgagggagag
     1741 caggcggttg gccgtggaca tggcggccag ctccccgccg gccccgttca tcaccaccac
     1801 gaactcgtcg ccgccgaggc gggcggtgaa gtcaccgggc cggaccgaca tgcggatgcg
     1861 gtcggccgtc gtgatgagga cgcggtcccc ggccagatgg cccaggtagt cgttcatgta
     1921 cttgaaccgg tcgaggtcca agaagaggat cgccaccggg ctgcggcccg tggagagccg
     1981 gcggtcgagc tcctcgatga gcgcccggcg gttgggcagg ccggtcaggt cgtcgtggag
     2041 ggccaggtgc tggagccggg tctcggcgtc gatgcgggcg tcgagctggg tcagcatcga
     2101 ggcgaccgcc tgcagggcgt tgatctgggg ctgggtccac tgggcgtcgt agaactgcat
     2161 gaagccgatc gccccgtcgg tcatgtcgcc cttgagcagc ggcaccgccg ccccggagaa
     2221 ctcggcgacc cccgagccct ccttcaccct ctcgttgtac tcgtcggggt tctccgacgc
     2281 ccggacgatg aggggctcct tcaggtcgcg cagggcggcg aagatggggt ccgagtcgaa
     2341 ggggacgacg gcgagcgggt ccgggtcggg cttgtgggcc cggggcgggt actccgcgac
     2401 catcacgctc gcttcggcca cgaggtcgtt cttgcggatg aaggcgacgt cggcccggag
     2461 gaactcggcc agcacggtca ggatctcggt cagggtctcg gtgtaggtgg ccgaggtggc
     2521 gaccatgagc cggtcggccg caccgatcac gagctcgtcc aggctcccct ggtactcggc
     2581 ggaggcccgg gcccaggccg acccgcacag cgcggcgaag acccggacgg tcgagatgtc
     2641 gccgtcggtc cagcgctcgc cggccaggcg ggccaccccg agggccccga cggcggggcc
     2701 ggggccgatc cggaccggct cggcccacag cgtccaggcc tccttgcggc cggggccggc
     2761 gggaagctcg aggtagccga gcgggccctc ggccacgagg cggtcccgca tggtccgggc
     2821 ga
//
LOCUS       DATGJT010000028         3469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_107440, whole genome shotgun sequence.
ACCESSION   DATGJT010000028 DATGJT010000000
VERSION     DATGJT010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107440"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..981)
                     /locus_tag="VKX24_00455"
     CDS             complement(58..981)
                     /locus_tag="VKX24_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012853570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HLJ06979.1"
                     /translation="MPGLLGAHDELLRVVEAGFETTKITVQGNRIVAEGPEAARVAAL
                     FDELVRVLQSGQGLDPAKVARTIDMVREDLSPSEVLNAEVLRSAKGRTIRPRSAGQKR
                     YTDAIAENVITVGIGPAGTGKSYLAVALAVQALQSRQVKRIILTRPAVEAGERLGFLP
                     GDLMAKVDPYLRPLYDALYDLLDPEGAQRLLDRGTVEVAPLAFMRGRTLNSSFIILDE
                     AQNTTPEQMKMFLTRIGFGSKCVVTGDVTQIDVPGGRSGLIGLEALLGSVENLAFVHL
                     TRRDVVRHKIVADIIDAYERAEREAAGGDGH"
     gene            complement(1080..1430)
                     /locus_tag="VKX24_00460"
     CDS             complement(1080..1430)
                     /locus_tag="VKX24_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019633931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HLJ06980.1"
                     /translation="MDDCLFCGIVAGTVPATIVHETERTVAFRDIAPAAPVHVLVVPR
                     AHVTNASSIGPEHAADLAAMLVAAREVATAEGIGGEERGYRLVFNVGRDTFNSVPHLH
                     LHVLGGRPMRWPPG"
     gene            complement(1423..1656)
                     /locus_tag="VKX24_00465"
     CDS             complement(1423..1656)
                     /locus_tag="VKX24_00465"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ06981.1"
                     /translation="MADPVRWLGTKEASARLGVTLRSLYRFIDEGALRAYRFGRVIRL
                     MEADLDDFIESRRIEPGTLEHLYPARKGVPQHG"
     gene            complement(1709..2401)
                     /locus_tag="VKX24_00470"
     CDS             complement(1709..2401)
                     /locus_tag="VKX24_00470"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HLJ06982.1"
                     /translation="MAQVFVDDPAAPELDDEDAHHLLRVLRLRPGEIVIASDGRGSSA
                     RCRFTGAGALLEPEGAPEYVERPAPALTVAFAPVKGDRPEWVVQKLTELGVDRIMPIT
                     TERSVVRWPRERGARAADRLRKVAREAAAQSRRAWLPEVGVPRPLSALVAEADEQVAL
                     AEHDGGPPTLRCPSVAVGPEGGWSEAERSLGLPAVRLGDATLRAETAAVAAGVVLSAL
                     RAGLVGAAGTAR"
     gene            complement(2431..>3469)
                     /locus_tag="VKX24_00475"
     CDS             complement(2431..>3469)
                     /locus_tag="VKX24_00475"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HLJ06983.1"
                     /translation="ARELHPDANGGDPDAEARFKEVSLAYEVLRDPERRARYDRFGPS
                     GVFGGGGQGGMHFDFESGLGDIFEAFFGSMGARTGRRGPMPGSDAETRLSLAFGEAVF
                     GVQKELTVRLPVTCDTCGGTGAEPGTQPVTCPDCRGAGETRRIRQSLLGQVVTSVACG
                     RCQGMGELTPTPCTACRGEGRRMEQRTLTVEVPAGVENGSTLRLADRGPAGPRGGPNG
                     SLFVQLVVEADERFERTGDDLHTSVHVSMAQAALGHSLSVETLEEPAVITIEPGTQSG
                     QVTRLRGAGVPHLRGRGRGDLYVHVLVDTPTALTDRQRELLTQLAAERGEPLDEHQGD
                     GVFSKIKSVFS"
BASE COUNT          451 a         1294 c         1265 g          459 t
ORIGIN      
        1 tcgctccagc ggtcgaggtc gaccggctcg gcggactgct cgtcggcgac gaagacgtca
       61 atggccatcg ccgccggcag cctcccgctc ggcccgctcg taggcgtcga tgatgtcggc
      121 cacgatcttg tggcggacca cgtcgcgccg ggtcaggtgg acgaaggcca ggttctcgac
      181 cgagccgagc agcgcctcca gcccgatcag gccggaacga cctccgggca cgtcgatctg
      241 ggtcacgtcc ccggtgacca cgcacttgga cccgaagccg atgcgggtca ggaacatctt
      301 catctgctcg ggggtcgtgt tctgggcctc gtcgaggatg atgaacgacg agttgagggt
      361 gcggccgcgc atgaaggcga gcggagccac ctcgaccgtg ccccggtcga gcagccgctg
      421 ggccccctcg gggtcgagca ggtcgtagag ggcgtcgtac agggggcgca ggtaggggtc
      481 gaccttggcc atcaggtcgc cgggcaggaa gccgagccgc tcccccgcct ccaccgccgg
      541 gcgggtgagg atgatccgct tcacctgccg ggactgcagc gcctgcaccg ccagcgccac
      601 ggccaggtag gacttgccgg tgccggccgg cccgatgccg accgtgatca cgttctcggc
      661 gatggcgtcg gtgtagcgct tctggccggc ggagcggggg cggatggtgc ggcccttggc
      721 ggaccggagc acctcggcgt tcaggacctc ggacggcgac aggtcctcgc ggaccatgtc
      781 gatcgtccgg gccaccttcg ccgggtcgag gccctggccc gactgcaaca cccggacgag
      841 ctcgtcgaac agcgccgcca cccgcgccgc ctcggggccc tcggcgacga tgcggttccc
      901 ctgcacggtg atcttggtgg tctcgaagcc cgcctcgacg acacgcagga gctcgtcgtg
      961 cgcgccgagc agccccggca tcaggtggtt gtgggcgacg acgagctcgg cccggggtgt
     1021 cgggccggtc tcgcccaagg tctcggtcag ggcgtcgggc gtgatcccgg ggctcgtgct
     1081 cacccgggtg gccagcgcat cggacgcccg ccgagcacgt gcaggtggag gtgcgggacc
     1141 gagttgaagg tgtcccgccc gacgttgaag acgagccggt agccccgctc ctcgccgccg
     1201 atcccctcgg ccgtggccac ctcccgggcg gcgaccagca tcgccgcgag gtccgcggcg
     1261 tgctcggggc cgatgctcga ggcgttggtc acgtgcgccc ggggcacgac gaggacgtgc
     1321 accggtgccg ccggggcgat gtcccggaag gcgacggtcc gctcggtctc gtgcacgatc
     1381 gtggccggaa cggtgccggc cacgatcccg cagaagaggc agtcatccat gttggggcac
     1441 ccccttgcgc gccgggtaga ggtgctcgag tgtccccggc tcgatgcgcc gggactcgat
     1501 gaagtcgtcg aggtcggcct ccatgagccg gatcacccgc ccgaagcggt aggcccgcag
     1561 ggcgccctcg tcgatgaacc ggtagaggct ccgcagggtc accccgagcc gggccgaggc
     1621 ttccttcgtg cccagccagc ggaccggatc ggccatcagg ttcggccctc cactccgacc
     1681 cagcctatga gacccggcgt cggccccgtc acctggccgt ccccgccgcc ccgacgagcc
     1741 cggcccgcag tgcgctgagc acgactcctg cggccaccgc cgccgtctcg gcccgcagcg
     1801 tcgcgtcgcc gaggcgcacg gcgggcagcc cgagcgagcg ctcggcctcg ctccagccgc
     1861 cctccggacc gaccgcgacc gacgggcacc gcagcgtcgg cgggccgccg tcgtgctcgg
     1921 ccagcgcaac ctgttcgtcg gcctcggcga cgagggcgga caggggccgt ggcaccccga
     1981 cctcgggcaa ccaggcccgg cggctctgcg ccgcggcctc cctcgccacc ttccgcagac
     2041 ggtcggccgc ccgggccccc cgctcccgcg gccagcggac gaccgagcgc tcggtcgtga
     2101 tcggcatgat ccggtcgacg ccgagctcag tcagcttctg gaccacccat tcgggccggt
     2161 cccccttgac cggggcgaag gccaccgtga gggcaggggc cggccgctcg acgtactcgg
     2221 gtgcgccctc gggctcgagc agggcgcctg cacccgtgaa ccggcaccgg gccgacgagc
     2281 cgcggccgtc cgacgcgatc acgatctcgc ccgggcggag acgcagcacc cggaggaggt
     2341 ggtgggcgtc ctcgtcgtcc agctcgggag ccgccgggtc gtcgacgaag acctgggcca
     2401 ccgcccgcgg cgttcccgcc gccgtcgcgt tcaggagaag accgacttga tcttcgagaa
     2461 cacgccgtcg ccctggtgct cgtcgagggg ttcaccgcgc tcggccgcca gctgggtgag
     2521 gagctcacgc tggcggtcgg tgagggcggt cggcgtgtcg acgagcacgt ggacgtagag
     2581 gtcgccgcgg ccccggccgc gcaggtgcgg caccccggcg ccccgcaggc gggtcacctg
     2641 accgctctgg gtgcccggct cgatggtgat cacggccggc tcctccaggg tctcgacgct
     2701 gagcgagtgg ccgagggcgg cctgggccat gctcacgtgc accgaggtgt gcaggtcgtc
     2761 cccggtcctt tcgaacctct cgtcggcctc caccaccagc tggacgaaca gcgagccgtt
     2821 cgggccgcca cgcggtccgg ccggcccgcg gtcggccaac cggagggtgg agccgttctc
     2881 cacccccgcc gggacctcga cggtcagggt gcgctgctcc atccgccggc cttcgccgcg
     2941 gcaggcggtg cacggcgtgg gggtgagctc gcccatgccc tggcaccggc cgcaggccac
     3001 cgacgtcacc acctggccca gcagcgactg acggatccgc cgggtctcgc ccgccccccg
     3061 gcagtccgga caggtcaccg gctgggtgcc gggctcggcg ccggtgccgc cgcaggtgtc
     3121 gcacgtcacc ggcagccgga cggtcagctc cttctggacg ccgaacacgg cctcgccgaa
     3181 agccagcgac agccgagtct cggcgtcgga gccgggcatc gggccgcgac ggccggtccg
     3241 ggcgcccatc gagccgaaga aggcctcgaa gatgtcgccc aggccggact cgaagtcgaa
     3301 atgcatcccg ccctggcccc ctccaccgaa gacgccgctc ggcccgaagc ggtcgtagcg
     3361 ggcgcggcgc tcggggtcgc gcaggacctc gtaggcgagg ctcacctcct tgaaccgggc
     3421 ctccgcgtcc gggtcgccgc cgttggcgtc ggggtgcagc tcgcgggcc
//
LOCUS       DATGJT010000029         4094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_3788,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000029 DATGJT010000000
VERSION     DATGJT010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4094
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3788"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VKX24_00480"
     CDS             <1..506
                     /locus_tag="VKX24_00480"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HLJ06984.1"
                     /translation="FKAEVLAGAAARPACDRVPIAADLLAGDWSRLLLEAGFRPDEPT
                     VWIAEGLLIYFSQEENDRLLDQIGALSAPGHRLAITSSRPDRPLRPGSAPAATGTGLL
                     HDPDSVIALWRWQGPSDLAAWLAGHGWKADVYDREGRARAYGRPLELAEEPEAATRTL
                     LIDARRL"
     gene            complement(665..922)
                     /locus_tag="VKX24_00485"
                     /pseudo
     CDS             complement(665..922)
                     /locus_tag="VKX24_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003181955.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="stage V sporulation protein S"
     gene            complement(1200..2228)
                     /gene="recA"
                     /locus_tag="VKX24_00490"
     CDS             complement(1200..2228)
                     /gene="recA"
                     /locus_tag="VKX24_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HLJ06985.1"
                     /translation="MERDKALEMALGQIEKQFGKGSIMRLGENTHMQIGVVPTGALAL
                     DVALGVGGLPRGRIVEIYGPESSGKSTLATHVVAEAQRNGGTCAYIDAEHAMDPVYAQ
                     AIGVNIDELLISQPDTGEQGLEIADMLIRSGSLDVIVIDSVAALVPRAEIEGEMGDSH
                     VGLQARLMSQALRKLTGNLNRSQTIAIFINQLREKIGVMFGSPETTPGGRALKFYASV
                     RLDIRRIESLKDGAEVVGNRTRVKVVKNKCAPPFKQAEFDIMYGKGISREGSVIDLGV
                     DLGIVKKSGAWFTYEGEQLGQGREKAKEFLAASPELMVEITDKVMRKAGIGDAVDTVE
                     PEVADIEP"
     gene            complement(2365..2904)
                     /gene="thpR"
                     /locus_tag="VKX24_00495"
     CDS             complement(2365..2904)
                     /gene="thpR"
                     /locus_tag="VKX24_00495"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HLJ06986.1"
                     /translation="MAVKPPEAVIDAVAAAVAPARSVRAGLRWEPRERYHLTLQFLGA
                     VRQLAPVVEGLASALSGREAFALRLGGAGAFPKPGRARVVWIGAAVGGEEVAGLAGAV
                     AGALGPLGYEPDRKEFHPHLTVARLKVPDDVGDVLAALGAGPLGEAFTVAELVLYQSV
                     LSAKGPTYTVLERFPLGNA"
     gene            complement(2931..>4094)
                     /locus_tag="VKX24_00500"
     CDS             complement(2931..>4094)
                     /locus_tag="VKX24_00500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HLJ06987.1"
                     /translation="LAMAGIDSYLHVQVGDNQARMVAQLRALLADADAVIVCGGLGPT
                     QDDITREAIAEVMGAPLERRDDLADAIREMFASRGRSMPASNLRQADVPKGGEPIPNP
                     NGTAPGLLCPVNGKTVYAVPGVPHEMRHMVASAVIPHLLERSGERGTILSRSLKTWGT
                     SESGLSEMISGRVDTQTNPTIAFLARGIEGLIVRISAKAGTREDAEALIDAEEALLRE
                     ILGDLVFGVDDETMESVVSDLLRERGLSLGLAESLTGGLVGSRISDAPGSSEIFKGSI
                     VSYATEVKRSVLGVTAEHVVSGECAVQMAEGARRVLGADVGLAVTGVAGPTEQEGQPV
                     GTVWFGLAMPGREPEAVHARLPGNRLLVRQFSTISLLNLARLRLLGRSGPGVL"
BASE COUNT          571 a         1534 c         1387 g          602 t
ORIGIN      
        1 ccttcaaggc cgaggtcctc gccggcgcag ccgcccgccc cgcctgcgac cgggtgccga
       61 tcgccgccga cctcctggcc ggcgactggt cccggctcct cctcgaagcc ggcttccgcc
      121 cggacgagcc aacggtgtgg atcgccgaag gcctccttat ctacttctcc caggaggaga
      181 acgaccggct gctcgaccag atcggcgccc tgtcggcccc aggccaccgc ctggcgatca
      241 cttcgagccg gccggaccgc ccgctccgcc cgggcagcgc gccggcggcg acgggcaccg
      301 gcctgctcca cgaccctgac tcggtcatcg ccctctggcg ctggcagggc ccgtccgatc
      361 tcgccgcctg gctggccggc cacggctgga aggccgacgt ctacgaccgt gagggacggg
      421 cccgggccta cggccgcccg ctggagctgg ccgaggaacc cgaggccgcc acccgcaccc
      481 tcctcatcga cgcccgccgc ctctgagggc ggtaacgccg aacgcgacga agcgcccccg
      541 gaggggcgct tcgggcacac gtcggcaggg ccggcggccc cgcggacggg ctctagacgt
      601 tgaggcggga caggtcgacc gggacggtct cgcccggcgt acccacccga ccggcggccc
      661 gcaccctgtt ctccaccgag aggcggatgg ccgtgcggcc ctcgccctgg atctcgacgt
      721 cggcgaaggt cgggatgcac acgaggtcga tgcccgatgg cgcgacgtac ccccgagcga
      781 tcgcgatggc cttgatcgcc tggttgaggg caccggcgcc gatcacctgg acctcgacgc
      841 tgcccatctg ccggacgact ccggccagtg ccccggccac cgagttgggg ttcgaccggg
      901 aggacacttt caggacttcc atggccgtgc cttccttgtg ggggacggag tgctgcgtct
      961 cttgtgcacg atacgccgct ttcctgccaa aaacacctcg gcgccgtacc gtttgcccga
     1021 ttccctgtca agcctacctg cggtccgtcc tccgtcaacc ccgctgcgtc gaccttgacg
     1081 ttcgcttgac gcagggttca catcgggcgt taccccatgg taacccctgg gggaaggggc
     1141 cggcgacacc ggtcaccggc cccctgtgta cccaggctcc ccacgggcaa acatgccggt
     1201 cagggctcga tgtcggccac ctccggctcg accgtgtcca cggcgtcccc gatgccggcc
     1261 ttgcgcatca ccttgtcggt gatctcgacc atcaactcgg ggctggcggc gaggaactcc
     1321 ttggccttct cccgaccctg gccgagctgc tcgccctcgt aggtgaacca ggccccggac
     1381 ttcttgacga tgccgaggtc gacgccgagg tcgatgaccg agccctcccg gctgatcccc
     1441 ttgccgtaca tgatgtcgaa ctcggcctgc ttgaacggcg gggcgcactt gttcttcacg
     1501 accttgaccc gcgtgcggtt gcccaccacc tcggcgccgt ctttcaggct ctcgatccga
     1561 cggatgtcga ggcggaccga ggcgtagaac ttgagggccc ggccccccgg cgtggtctcg
     1621 ggcgagccga acatcacgcc gatcttctcc cgcagctggt tgatgaagat ggcgatcgtc
     1681 tgcgaccggt tgaggttgcc ggtgagcttg cgcagcgcct ggctcatcag ccgggcctgg
     1741 aggccgacgt gggagtcgcc catctccccc tcgatctcgg cccggggcac cagggcggcc
     1801 accgagtcga tcacgatcac gtcgagcgac cccgaccgga tgagcatgtc ggcgatctcc
     1861 agcccctgct cgcccgtgtc gggctgggag atcaggagct cgtcgatgtt gaccccgatg
     1921 gcctgggcgt agaccgggtc catggcgtgc tcggcgtcga tgtaggcgca ggtgccgccg
     1981 ttgcgctggg cctcggccac cacgtgcgtg gccagcgtcg acttgcccga cgactcgggc
     2041 ccgtagatct ccacgatccg gccccggggg agcccgccga ccccgagggc cacgtcgagg
     2101 gccagggccc ccgtcggtac cacgccgatc tgcatgtggg tgttctcccc caaccgcatg
     2161 atcgaaccct tgccgaactg cttctcgatc tggccgagcg ccatctcgag ggccttgtca
     2221 cgctccactg gaacccctcc tgggtttgtg cgtctcgtcg tctgggggaa gtcgccaggg
     2281 gcagcgtacc gacggggtgt gacactgacg acaaccgtgg aattccacgc ctgtcaacaa
     2341 cagtatctcg aacgttcgtt cgcctcaagc attgccgagc ggaaaccgct ccagcaccgt
     2401 gtaggtcgga cccttcgccg agagcacgct ctggtagagc accagctcag ccacggtgaa
     2461 ggcctccccc agcggcccgg cgccgagggc ggccaggacg tcgcccacat cgtccggcac
     2521 cttcaggcgg gccacggtga gatgggggtg gaactccttc cggtcgggct cgtagccgag
     2581 gggcccgagt gccccggcga cggcgccggc caaccccgcc acctcctcgc ccccgacggc
     2641 ggcgccgatc cacaccaccc gggcccgccc cggcttcggg aacgcgccgg cgccgccgag
     2701 ccggagcgcg aacgcctccc gcccggacag ggccgaggcc agcccctcga ccaccggagc
     2761 cagctgccgt acggcgccga ggaactggag ggtcaggtgg tagcgctccc gcggctccca
     2821 gcgcagcccg gcacgcaccg atcgggccgg tgccaccgcc gcagccacgg cgtcgattac
     2881 cgcctccgga ggtttgacgg ccacgaaggc ccgcccgacg tccggtcggt tcagaggact
     2941 ccggggccgg accggccgag cagccggagg cgggccaggt tgaggaggga gatcgtggag
     3001 aactgccgca cgaggagtcg gttgccgggc agccgggcgt ggacggcctc gggctcccgg
     3061 ccgggcatgg ccaggccgaa ccacaccgtc cccaccggct ggccctcctg ctcggtcggg
     3121 ccggccacgc cggtcacggc caggccgacg tcggcgccga gcacccggcg ggcaccctcg
     3181 gccatctgca ccgcgcactc gccgctcacg acgtgctcgg cggtgacgcc gaggaccgac
     3241 cgcttcacct cggtggcgta ggagacgatc gaccccttga agatctcgct cgagccgggg
     3301 gcgtcggaga tccgggagcc gacgagccca ccggtcagcg actccgccag tcccagcgac
     3361 aggccccgct ccctcagcag gtcgctcacc accgattcca tcgtctcgtc gtcgacgccg
     3421 aagacgaggt cgccgaggat ctcccgcagc agggcctcct cggcgtcgat cagcgcctcg
     3481 gcgtcctccc gggtgcccgc cttggccgag atgcggacga tgaggccctc gatcccccgg
     3541 gccaggaagg cgatcgtcgg gttggtctgg gtgtcgaccc gcccggagat catctccgag
     3601 agccccgact ccgacgtccc ccaggtcttg aggctccggg agaggatcgt gccccgctcg
     3661 cccgagcgct ccagcaggtg cgggatcacc gccgaggcga ccatgtgccg catctcgtgg
     3721 gggacgccgg gcacggcgta gacggtcttc ccgttcaccg ggcacagcag cccgggggcg
     3781 gtgccgttgg ggttcggtat cggctcgccg cccttgggga cgtcggcctg gcgcaggttg
     3841 ctggcgggca tcgaccggcc ccgggaggcg aacatctccc ggatggcgtc ggccaggtcg
     3901 tcgcgccgct cgagcggcgc ccccatgacc tcggcgatgg cctcccgggt gatgtcgtcc
     3961 tgcgtggggc cgagcccgcc gcagacgatg accgcgtcgg cgtcggccag cagcgcccgg
     4021 agctgggcga ccattcgggc ctggttgtca ccgacctgga cgtggaggta gctgtcgatc
     4081 cccgccatgg ccag
//
LOCUS       DATGJT010000030         2342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1248445, whole genome shotgun sequence.
ACCESSION   DATGJT010000030 DATGJT010000000
VERSION     DATGJT010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248445"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..1581)
                     /locus_tag="VKX24_00505"
     CDS             complement(97..1581)
                     /locus_tag="VKX24_00505"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HLJ06988.1"
                     /translation="MRWPPSRRAVRLAVGVGAAAAGSVGVAGGVVLAREVRRSGARVL
                     VERARRSRRVAFLALRRAFALARLRTRRAGEEELDEFHVHTAEQVFELLGGMKGAIMK
                     LGQMLSVVAEGLPEVYQQALRGLQQSAPPMAPHLVADVVRTELGQPPERAFFEFSPEP
                     VAAASIGQVHRAKLFDGTPVAVKVQYPGVDVAIRADLDNAFLLYSAARAIAPGIDPEP
                     VVSELRERMTEELDYRIEADNQEEFRAAYEGHPWVRIPAVHRELTTARVLVSEWVSGR
                     SFYDLLDLPQADRDRVGEQLFRFWAGSISKLLLFNADPHPGNYFFEEDGEGIWFLDFG
                     LVKRFEAVEIEHLKDRVAALRSGDDEAVVDAIVRHGWLRPGTKIDHKRMVELARLSVL
                     PLVDHRPFTYTREYMAETIDAMFNIEGRYGDVIRQMTLPRNQLILTRIHLGLGGLFAR
                     LGASRDWASILDEYLFDAPPSTPMGIEVAGWPLVPKGVRGAPSP"
     gene            complement(1587..>2342)
                     /locus_tag="VKX24_00510"
     CDS             complement(1587..>2342)
                     /locus_tag="VKX24_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010232658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HLJ06989.1"
                     /translation="LGVDEAWVLLTDVERIAPCMPGAELQEIEGEEYRGVVKVKVGPI
                     TAQYKGKATFVEKDDAAHKAVLRAEGRDTRGQGNANATITATLESQESGTKVTVITDL
                     AITGRAAQFGRGVMADVSTKLLGQFVSCLENNVLGAAPAEVGAGREAAASSSGAATPA
                     PAKPQTREPAGASDAALVGRPSGSNGSKSESPEPAATVSGGPRQVTSRPAEPVDLLGT
                     AGSPVVKRLLPALLGALVAFLIGRRLRRRRRED"
BASE COUNT          317 a          863 c          850 g          312 t
ORIGIN      
        1 tcgatcgcca cggcgagctc ggcgcggacc cgcttgagcc gctcggaaac gtcgaggaga
       61 cgccgctgga ggatcgacct ggacatcaga gccagtctac gggctggggg cgccccgcac
      121 acccttgggc accaggggcc aaccggcgac ctcgatgccc atcggggtgg acggcggggc
      181 gtcgaagagg tactcgtcga ggatcgacgc ccagtcccgc gacgccccga gccgggcgaa
      241 gagcccgccc aacccgaggt ggatccgggt caggatcagc tggttgcggg gcagggtcat
      301 ctgccggatg acgtcgccgt atcggccctc gatgttgaac atggcgtcga tcgtctcggc
      361 catgtactcc cgggtgtagg tgaacggccg gtggtcgacg agcgggagga ccgacagccg
      421 ggccagctcg accatccgct tgtggtcgat cttcgtgccc ggccggagcc agccgtggcg
      481 gacgatggcg tcgaccacag cctcgtcgtc gccgctccgg agcgccgcca cccggtcctt
      541 gaggtgctcg atctccaccg cctcgaaccg cttcacgagc ccgaagtcga ggaaccagat
      601 cccctcgccg tcctcctcga agaagtagtt gcccggatgg ggatcggcgt tgaacagcag
      661 cagcttgctg atcgacccgg cccagaaccg gaagagctgc tcccccaccc ggtcgcggtc
      721 ggcctggggc aggtcgagga ggtcgtagaa cgaccgcccc gacacccact cgctgacgag
      781 gacccgggcg gtcgtgagct cccggtggac ggccgggatc cgcacccacg ggtggccctc
      841 gtaggccgcc cggaactcct cctggttgtc ggcctcgatc cggtagtcga gctcctcggt
      901 catccgctcc cgcagctcgc tgaccaccgg ctcggggtcg atgccggggg cgatggcccg
      961 ggccgccgag tacaggagaa aggcgttgtc gaggtccgcc cggatggcga cgtcgacgcc
     1021 gggatactgg accttcaccg ccacgggcgt gccgtcgaac agcttcgccc ggtggacctg
     1081 cccgatcgag gcggcggcca ccggctcggg ggagaactcg aagaacgccc gctccggcgg
     1141 ttggcccagc tccgtccgga cgacgtcggc caccaggtgc ggggccatcg gcggggcgct
     1201 ctgctgcagt ccccggagcg cctgctggta cacctcgggc agcccctcgg ccaccaccga
     1261 gagcatctgg cccagcttca tgatggcgcc cttcatgccg ccgaggagct cgaagacctg
     1321 ctcggcggtg tggacgtgga actcgtcgag ctcctcctcg ccggcccggc gggtccgcag
     1381 ccgggccagg gcgaaggccc ggcgcagggc caggaaggcg acccgccggc tgcgccgggc
     1441 ccgctcgacc agcacgcggg cccctgagcg ccgcacctcg cgggccagca cgaccccccc
     1501 ggccacgccg accgagcccg ccgccgccgc gcccacgccg acggccaggc ggacggcccg
     1561 gcgggacggg ggccagcgca ccggcgtcag tcttcccggc gcctccggcg gaggcggcgg
     1621 ccgatgagga aggccaccag cgccccgagg agggccggta gcagccgctt gaccaccggg
     1681 gagccggcgg tgccgaggag gtcgacgggc tcggcgggcc tggaggtgac ctgacgcggg
     1741 ccgcccgaga ccgtggcggc gggctcgggg gactccgact tcgacccgtt gctcccgctc
     1801 ggccggccga ccagggcggc gtcgctggcg cccgccggtt cccgggtctg cggtttggcc
     1861 ggggccgggg tcgccgcccc ggaggaggac gccgccgcct cccggccggc cccgacctcg
     1921 gccggggcgg cccccagcac gttgttctcc aggcaggaga cgaactggcc caggagcttc
     1981 gtgctgacgt cagccatgac gccccggccg aactgcgccg cccgcccggt gatggcgagg
     2041 tcggtgatca ccgtcacctt ggtgccgctc tcctgcgact ccagcgtggc ggtgatcgtg
     2101 gcgttggcgt tgccctggcc ccgggtgtcg cgcccctcgg cccggaggac ggccttgtgg
     2161 gcggcgtcgt ccttctcgac gaacgtcgcc ttgcccttgt actgggcggt gatcggaccg
     2221 accttgacct tgacgacgcc ccggtactcc tcgccctcga tctcctggag ctcggcgccg
     2281 ggcatacagg gggcgatgcg ctcgacgtcg gtcagcagca cccaggcctc gtcgaccccg
     2341 ag
//
LOCUS       DATGJT010000031         2831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1041446, whole genome shotgun sequence.
ACCESSION   DATGJT010000031 DATGJT010000000
VERSION     DATGJT010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041446"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..793)
                     /locus_tag="VKX24_00515"
     CDS             complement(<1..793)
                     /locus_tag="VKX24_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLJ06990.1"
                     /translation="MIPDTGLPVEECVAALRAALAGDGQAVLQAPPGAGKTTVVPLRL
                     LDEPWLAGRRIVMLEPRRLATRAAARRMAALLGEDVGATAGYRTRDERRTGPDTRIEV
                     VTEGILTRRLQRDPALPGVGLVIFDEFHERNLHADLALALTLDARPALRPDLRLLVMS
                     ATLDTARIAALLGSASAADGGAAPVITSEGRAWPVDVRFTPPAPPARKAGYKGRPAPP
                     PRPGSNVAAAATSAVLRALREEPGDVLVFLPGAGDIRRVEAALAGP"
     gene            complement(810..1010)
                     /locus_tag="VKX24_00520"
     CDS             complement(810..1010)
                     /locus_tag="VKX24_00520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ06991.1"
                     /translation="MIAVVLFLLIFFGVPLVCWLAVRAARDMDARGEAGWRYGLLVLC
                     LAPIGVVVWLAARARHPSPVDR"
     gene            complement(1024..1908)
                     /locus_tag="VKX24_00525"
     CDS             complement(1024..1908)
                     /locus_tag="VKX24_00525"
                     /EC_number="3.8.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF002938.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018786 - haloalkane dehalogenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloalkane dehalogenase"
                     /protein_id="HLJ06992.1"
                     /translation="MEKHFASVFDHHMAYCDTAPDGHPAERTFLFLHGNPTSSYLWRK
                     VMPHLEGLGRCIAPDLIGMGDSDKLPDSGPARYTFHEHRRYLDALLVGLGLTAAGRIV
                     LVVHDWGSALGFDWARRHPHAVDGMAYMEAIVAPVTWDDWPDEARGIFQAFRSPKGEE
                     LILERNYFVEKILPLSVLSPLSEETMAAYRRPFARPGEDRRPTLTWPRQIPIEGEPAD
                     VVADVEAYGRWLAGDDSPPKLFVNAEPGSILVGKQREFCRSWPNQAEVTVPGRHFVQE
                     DSPDEIGAAVAEFVRTLK"
     gene            complement(1936..>2831)
                     /locus_tag="VKX24_00530"
     CDS             complement(1936..>2831)
                     /locus_tag="VKX24_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018792738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HLJ06993.1"
                     /translation="AWYGSHTTRLKLGTGICQMPARTPTALAMAAMTVDHLSEGRLLL
                     GVGASGPQVVEGWYGQPYPKPLERTREYVDIVRRTVAREDPVQYAGRHYTLPYAGEAG
                     TGLGKALKSTIHPRRAEIPIYLGAEGPKNIALAAEIADGWVAMLYSPHDDGWYRDRLA
                     EGFARRAPERSTASDFEVVCMTPVVINPDVEAAADMIRPHLALYAGGMGARGANFHFD
                     AIARAGFEAEATKVQELYLAGNKKDAIAAVPTAMVEAMALIGPPEKIRDDLAAWEGGV
                     VTTLLVSAPPAMLRVLAEIVV"
BASE COUNT          378 a         1020 c         1065 g          368 t
ORIGIN      
        1 ccggcccggc cagcgccgcc tccacccggc ggatgtcgcc cgctccgggc aggaagacga
       61 ggacgtcgcc gggctcctcc cgcagcgccc gcaacacggc cgaggtggcg gcggcggcga
      121 cgttcgaacc cggccggggc ggcggcgccg gccgcccctt gtatcccgcc ttccgggccg
      181 gcggcgccgg cggcgtgaac cggacgtcga ccggccacgc ccttccctcg ctcgtgatga
      241 ccggcgccgc cccgccgtcc gccgccgaag ccgagccgag aagggcggcg atgcgggccg
      301 tgtcgagcgt ggccgacatg accagcaggc ggaggtcggg ccgcagggcc gggcgggcgt
      361 cgagggtgag ggccagcgcc aggtcggcgt ggaggttgcg ctcgtggaac tcgtcgaaga
      421 tcaccagccc tactccgggc agtgccgggt cgcgctgcag gcgccgggtc aggatgccct
      481 cggtcacgac ctcgatccgg gtgtccgggc cggtgcggcg ctcgtcccgg gtgcggtagc
      541 cggcggtggc gccgacgtcc tcgccgagga gggccgccat gcggcgggcg gcggcccggg
      601 tggccagccg gcggggttcg agcatcacga tccgccggcc ggcgagccac ggctcgtcga
      661 gcagccgcag cggcacgacc gtcgtcttgc ccgcgccggg cggcgcctgc agcaccgcct
      721 gcccgtcgcc ggccagggcc gcccgcagcg ccgccacgca ctcctcgacc ggcaggccgg
      781 tgtcagggat caacgctcag ggtcaacggt cagcggtcga ccggcgaggg gtgtcgggcc
      841 cgggcggcca gccagaccac cacgccgatc ggcgccaggc acagcacgag caggccgtag
      901 cgccagccgg cctcgccccg ggcgtccatg tctctcgccg cccgcacggc cagccagcac
      961 acgaggggaa cgccgaagaa gatcagcagg aagaggacga cggcgatcat cggcgccggc
     1021 gcctcatttc agcgttcgca cgaactcggc cacggcggcg ccgatctcgt cgggcgagtc
     1081 ctcctggacg aagtgccggc ccgggacggt cacctcggcc tggttcggcc agctgcggca
     1141 gaactcccgc tgcttgccga cgaggatgga gccgggttcg gcgttgacga acagcttcgg
     1201 cggcgaatcg tcgccggcca gccaccggcc gtaggcctcg acgtcggcca ccacgtcggc
     1261 gggctccccc tcgatgggga tctgccgggg ccaggtcagc gtgggacgcc ggtcctcccc
     1321 cggccgggcg aacggccgcc ggtaggccgc catcgtctcc tccgacagcg gtgacagcac
     1381 cgacagcggc aggatcttct ccacgaagta gttgcgttcc aggatgagct cctcgccctt
     1441 cgggctgcgg aacgcctgga agatgccccg ggcttcgtcg ggccagtcgt cccacgtgac
     1501 gggggcgacg atcgcctcca tgtaggccat gccgtcgacg gcgtggggat ggcggcgggc
     1561 ccagtcgaag cccagcgccg aaccccagtc gtgcacgacg agcacgatgc ggccggcggc
     1621 ggtcagcccg aggccgacga gcagcgcgtc gaggtaccgg cggtgctcgt ggaacgtgta
     1681 gcgggcgggg cccgaatcgg ggagcttgtc ggagtcgccc atcccgatga gatcgggggc
     1741 gatgcagcgt ccgagtccct cgaggtgcgg catgaccttg cgccacaggt agctcgacgt
     1801 cgggttgccg tggaggaaca ggaacgtccg ctcggccgga tggccgtcgg gcgcggtgtc
     1861 gcagtaggcc atgtggtggt cgaacacgga ggcgaagtgc ttctccacgc cgctccctcc
     1921 tcgctgccgg acgggctaca ccacgatctc ggccagcacc cggagcatgg ccggcggggc
     1981 gctgacgagc agcgtggtca ccacgccccc ctcccaggcg gcgaggtcgt cgcggatctt
     2041 ctccggcggg ccgatcagcg ccatcgcctc gaccatggcg gtggggacgg cggcgatggc
     2101 gtccttcttg ttgccggcca ggtacagctc ctggaccttc gtggcctcgg cctcgaaccc
     2161 cgcccgggcg atggcgtcga agtggaagtt ggcgccccgg gcgcccatgc ccccggcgta
     2221 gagcgccagg tggggccgga tcatgtcggc ggccgcctcg acatcggggt tgatgacgac
     2281 cggcgtcatg cagacgacct cgaagtccga ggccgtcgaa cgctccggcg cgcgccgggc
     2341 gaagccctcg gcgaggcggt cgcggtacca gccgtcgtcg tggggcgagt acagcatcgc
     2401 cacccagccg tcggcgatct ccgccgccag ggcgatgttc ttcgggccct cggcgccgag
     2461 gtagatcggg atctcggcac ggcggggatg gatcgtcgac ttgagggcct tgccgagccc
     2521 ggtgcccgcc tccccggcgt agggcagcgt gtagtggcgg ccggcgtact gcaccgggtc
     2581 ttcccgggcc acggtcctgc ggacgatgtc gacgtattcc cgggtccgtt ccagcggctt
     2641 cggatagggc tggccgtacc agccctccac cacctggggg cccgaggcgc cgacgccgag
     2701 caggagccgg ccctccgaga ggtggtcgac ggtcatggcc gccatcgcca gtgccgtcgg
     2761 cgtccgggcc ggcatctggc agatgcccgt cccgagcttc agccgcgtcg tgtgggagcc
     2821 gtaccaggcc a
//
LOCUS       DATGJT010000032         2166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_937989, whole genome shotgun sequence.
ACCESSION   DATGJT010000032 DATGJT010000000
VERSION     DATGJT010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937989"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1159
                     /locus_tag="VKX24_00535"
     CDS             <1..1159
                     /locus_tag="VKX24_00535"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HLJ06994.1"
                     /translation="HHPWPVAVIGFLVLASASLPVFGLHLGSADAGNNPKGSTTKTAY
                     DLTAAGFGAGANGPMLIVADTTGESGSATADLARLTSALKATPGVAAVTGFRPSPSGH
                     AAIATLIPRTGPQDRKTEQLVHNVRENVLPQATAGTGLSVHVGGTTASAIDFSDMIGK
                     RLPLFIIAVLALSFLLLLMVFRSVLVPLKAVLMNLLSIGAAYGVMVAVFQWGWFGSIV
                     GVTGGPIEAWAPMMLFAIVFGLSMDYEVFLLSSIKEEYDASRDNAHAVSAGLALTARL
                     ITAAALIMVMVFGTFVLSDMRALKLIGLGLAVAVAIDASIVRIVLVPATMELLGEANW
                     WLPKWLDRILPHLAMEGAPEPGRMPAPVGAGGAGTDADADPDAERVGAGRP"
     gene            1312..>2166
                     /locus_tag="VKX24_00540"
     CDS             1312..>2166
                     /locus_tag="VKX24_00540"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ06995.1"
                     /translation="MDERFDVVVVGAGLAGLAAAATAARSGASTLVLDGHHPGGRAST
                     DERGRYRFNRGAHALYQGGEATAVLARLGVSVTGAYPPGKARGRIGDTIDVLPADLPT
                     MLRSRLVSLRGKVALARFLAGVKKWRPGDVAGLTIGQWLDGFHLPDDARRLALFLVRT
                     ATYVNDEHHVSADVAAGQIQMALANNVHYLDGGWASLVDGLAAAARRHGAEIRTGAAV
                     TSITAPAVALRRTSATPVVAEERRSAGDVTVVAGGREISAGAVVIAAGTPEAAAALLG
                     GGRPAAWAG"
BASE COUNT          277 a          807 c          777 g          305 t
ORIGIN      
        1 gcaccacccc tggcccgtcg ccgtcatcgg gttcctggtg ctggcttccg cctccctgcc
       61 ggtcttcggc ctccacctcg gcagcgccga cgccggcaac aaccccaagg ggagcacgac
      121 caagacggcc tacgacctca ccgccgccgg tttcggagcc ggggccaacg ggccgatgct
      181 gatcgtggcc gacacgaccg gagagtcggg ctcggcgacg gccgacctgg cccgcctgac
      241 ctcggccctc aaggccacgc ccggtgtggc ggccgtgacc ggcttccggc ccagcccgtc
      301 gggccacgcc gccatcgcca ccttgatccc gcgtaccggg ccccaggacc gcaagaccga
      361 gcagctcgtc cacaacgtcc gggagaacgt gctgccccag gccacggccg gcaccgggct
      421 ctccgtccac gtcggcggga cgacggcttc ggcgatcgac ttctccgaca tgatcgggaa
      481 gcgcctgccg ctgttcatca tcgccgtcct cgccctgtcg ttcctgctgc tgctcatggt
      541 cttccggtcg gtgctggtgc cgctcaaggc cgtcctcatg aacctgctgt cgatcggcgc
      601 cgcctacggc gtgatggtgg ccgtgttcca gtggggctgg ttcgggtcga tcgtcggcgt
      661 gaccggcggg ccgatcgagg cctgggcgcc gatgatgctc ttcgccatcg tcttcggcct
      721 gtcgatggac tacgaggtgt tcctcctgtc ctcgatcaag gaggagtacg acgccagccg
      781 cgacaacgcc cacgcggtga gcgccggcct ggcgctgacc gcccggctga tcaccgccgc
      841 ggcgctgatc atggtcatgg tcttcgggac gttcgtcctc tccgacatgc gggccctcaa
      901 gctgatcggg ctcggcctgg cggtggcggt ggccatcgac gccagcatcg tccgcatcgt
      961 gctggtgccg gccaccatgg agctgctcgg cgaagccaac tggtggctgc cgaagtggct
     1021 cgaccggatc ctcccccacc tggccatgga aggggcgccc gagccgggcc ggatgccggc
     1081 cccggtcgga gcgggcggcg ccgggaccga cgccgacgcc gaccccgacg ccgagcgcgt
     1141 gggcgccggc cggccgtaga tcccctccct tcggacgctt ttggagggcg tgaagcaccg
     1201 ccacggtgcg ccacgccctc caaaagccgg gggaagggct gtcacaaccc ggggggctac
     1261 ctcgtcgagt gggggacaac ggagaaacgc attcgacgca gggaggcgac gatggacgag
     1321 cgctttgatg tcgtggtggt cggagcaggg ctggccgggc tggcggcggc ggccacggcg
     1381 gcccggagcg gcgcatcgac cctggtgctc gacggccacc accccggcgg acgggccagc
     1441 accgacgagc gcggccggta ccgcttcaac cggggggccc acgctctgta ccagggcggc
     1501 gaggcgaccg ccgtcctcgc ccggctgggc gtgtcggtga cgggcgccta cccgcccggg
     1561 aaggcgcggg gccggatcgg cgacacgatc gacgtgctgc cggccgacct ccccacgatg
     1621 ctgcgctccc ggctggtgag cctgcggggg aaggtggccc tggcccggtt cctggccggg
     1681 gtcaagaagt ggcggccggg cgacgtcgcc ggcctcacca tcgggcagtg gctcgacggc
     1741 ttccacctgc cggacgacgc ccgccggctc gccctgttcc tggtgcgcac ggcgacctac
     1801 gtgaacgacg agcaccacgt ctccgccgac gtcgccgccg gtcagatcca gatggccctg
     1861 gccaacaacg tccactacct cgacggcggc tgggcgtcgc tggtggacgg cctggccgcc
     1921 gccgcccgcc gccacggcgc cgagatccgg acgggcgccg ccgtcacgtc gatcaccgcc
     1981 ccggctgttg cgcttcggcg tacctccgca acgcctgtcg ttgctgagga acgccggtcc
     2041 gccggagacg tgaccgtcgt ggcgggcgga cgggagatct cggccggcgc cgtcgtaatc
     2101 gccgccggga cgcccgaggc ggccgccgcc ctcctcggcg gcgggcggcc ggcggcctgg
     2161 gccggg
//
LOCUS       DATGJT010000033         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_834157, whole genome shotgun sequence.
ACCESSION   DATGJT010000033 DATGJT010000000
VERSION     DATGJT010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834157"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..342)
                     /locus_tag="VKX24_00545"
     CDS             complement(31..342)
                     /locus_tag="VKX24_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020573193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron oxygenase ferredoxin subunit"
                     /protein_id="HLJ06996.1"
                     /translation="MAEIVVCKVGDVAPGSAIRVDKDGCRLAVVRIGDDWYALDDRCS
                     HAEASLAEGEVWADECEIECPKHGSAFSLKTGEPLTLPATQPQNIYSVRIDGDNVLVR
                     I"
     gene            complement(335..1624)
                     /gene="sufD"
                     /locus_tag="VKX24_00550"
     CDS             complement(335..1624)
                     /gene="sufD"
                     /locus_tag="VKX24_00550"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HLJ06997.1"
                     /translation="MGTFTPDAARALGGAGWLTERRLSAAERFASMPLPTPAEEIWRY
                     SRIGELDLDRYRPAAADGAGTFLAPTVERAATVRVLNGAVVGIDLDEAYAAKGLVVAD
                     IATLPEPPAALGVCADASPDAFTVLNDAFTPGGTLVSVPDGMVVEHPIVIEHWVCGAG
                     GASFPRTVVAMGEDSEAQILERFTSPADAHLVVPVTELLVGDAARLRFLEVQDHSPDI
                     WQVALLRAHLGRDATLRASTVALGGEYARLRAEGLLTGSGASSEMVAVYFANEHQMLD
                     FRTLQDHDAPHTTSELLFKGAVEDEANSVYSGLIRLRPTAIRANATQTNRNLVLSEGA
                     KANSIPNLEIECDDVRCSHASAVGPIEPDQLYYLATRGVPPDVAERLIVFGFFEDAID
                     RLSFGAGAEQRLRAAVTRKFDARRCCHPDEVPEPRRG"
     gene            complement(1676..>2566)
                     /gene="sufB"
                     /locus_tag="VKX24_00555"
     CDS             complement(1676..>2566)
                     /gene="sufB"
                     /locus_tag="VKX24_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008654727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HLJ06998.1"
                     /translation="NKFAALNSAVWSGGSFIYVPPNTHVEMPLQAYFRINAENMGQFE
                     RTLIIVDEGSSVHYVEGCSAPIYTGDSLHSAVVEIIAKQGANVRYSTIQNWSPNVYNL
                     VTKRAKAEAEATVSWVDGNLGSKLTMKYPAVYLTGPKAHGEVLSVAYAGAGQHQDAGA
                     KMIHAAPETTSLIESKSISKDGGRTTYRGLVRVDPGCHHTKSHVRCDALILDEDSRSD
                     TYPYQEIEEQDAHIGHEATVSKVGEDQLFYLMARGLTEQQATAMIVNGFIEPVVKTLP
                     MEYAIELSRLIELSMEGAVG"
BASE COUNT          359 a          853 c          949 g          405 t
ORIGIN      
        1 cccggaggtc acggatccgc agcgtgctca ctagatcctc accagcacgt tgtcgccgtc
       61 gatgcggacg gagtagatgt tctggggctg cgtcgccggc agcgtcagcg gctcgcccgt
      121 cttgagcgag aaggccgaac cgtgcttggg gcactcgatc tcgcactcgt cggcccagac
      181 ctcgccctcg gccagcgacg cctcggcgtg ggagcagcgg tcatcgaggg cgtaccagtc
      241 gtcgccgatg cggacgacgg cgaggcggca gccgtccttg tcgacccgga tggccgaccc
      301 gggggcgacg tcgcccacct tgcacacgac gatctcagcc acggcggggc tccgggacct
      361 cgtcggggtg gcagcagcgg cgggcgtcga acttccgggt gacggcggcc cgcagccgct
      421 gctcggcgcc ggcgccgaac gacaggcggt cgatggcgtc ctcgaagaag ccgaagacga
      481 tcaggcgctc ggcgacgtcg ggcggcacgc cccgggtggc gaggtagtag agctggtccg
      541 gctcgatcgg gccgacggcc gaggcgtggg agcagcggac gtcgtcgcac tcgatctcca
      601 ggttcgggat cgagttggcc ttggcccctt cggagaggac gaggttgcgg ttggtctgcg
      661 tggcgttggc ccggatcgcc gtgggccgca gccggatgag cccggagtac acactgttgg
      721 cctcgtcctc caccgccccc ttgaacagca gctcggaggt ggtgtggggg gcgtcgtggt
      781 cctgcagggt gcggaagtcg agcatctggt gctcgttggc gaagtagacg gccaccatct
      841 cggagctggc tccggagccg gtgagcagac cctcggcccg cagccgggcg tactcgccgc
      901 cgagggccac cgtcgacgcc cgcagcgtgg cgtcgcgtcc gaggtgggcc cgcagcaggg
      961 ccacctgcca gatgtcgggg ctgtggtcct ggacctccag gaaccggagc cgggcggcgt
     1021 cgccgaccag cagctccgtc accggcacga cgagatgggc gtcggcgggc gacgtgaagc
     1081 gctccaggat ctgggcttcg gagtcctcgc ccatggccac gaccgtgcgg gggaacgacg
     1141 cgccgccggc accgcacacc cagtgctcga tgacgatcgg gtgctcgacc accatcccgt
     1201 ccggcaccga gaccagcgtg ccgcccgggg tgaaggcgtc gttgagcacc gtgaaggcat
     1261 cggggctggc gtcggcgcag acgccgaggg cggccggagg ctcggggagg gtggcgatgt
     1321 cggccacgac gaggcccttg gcggcgtagg cctcgtcgag gtcgatcccg accacggcac
     1381 cgttgaggac ccggacggtg gcggcccgtt cgacggtcgg ggccaggaac gtgccggcgc
     1441 cgtcggcggc ggctgggcgg taccggtcga ggtcgagctc accgatacgg ctgtagcgcc
     1501 agatctcctc cgccggggtg ggcagcggca tggacgcgaa gcgctcggcg gcggacagcc
     1561 gccgctccgt caaccagccc gcgccgccca gggcgcgcgc cgcgtcaggc gtgaaagtcc
     1621 ccatggcccc ccgacctggt ccaggtgcgc tgtcttccgg cgtggtacta cctgcctacc
     1681 cgacggcgcc ttccatcgac agttcgatca gccgcgacag ctcgatggcg tattccatcg
     1741 gcagcgtctt gaccaccggc tcgatgaacc cgttcacgat catggccgtg gcctgctgct
     1801 ccgtaagccc ccgggccatc aggtagaaga gctggtcctc gccgaccttg gacacggtgg
     1861 cctcgtggcc gatgtgggcg tcctgctcct cgatctcctg gtaggggtag gtgtcggagc
     1921 ggctgtcctc gtcgaggatc agggcgtcgc agcggacgtg gctcttcgtg tggtggcagc
     1981 ccgggtcgac ccggacgaga ccgcggtagg tcgtgcgccc gccgtccttg ctgatcgact
     2041 tcgactcgat gagcgacgtc gtctcggggg cggcgtggat cattttggcc ccggcgtcct
     2101 ggtgctggcc ggcgccggcg taggccaccg agagcacctc gccgtgggcc ttggggccgg
     2161 tcaggtagac cgccgggtac ttcatggtca gcttcgaccc gaggttcccg tcgacccacg
     2221 acacggtggc ctcggcctcg gccttggccc gcttcgtgac caggttgtag acgttgggcg
     2281 accagttctg gatcgtcgag tagcggacgt tggcgccctg cttggcgatg atctcgacca
     2341 ccgccgagtg gagcgagtcg ccggtgtaga tcggcgccga gcatccctcg acgtagtgca
     2401 ccgaggagcc ctcgtcgacg atgatcagcg tccgctcgaa ctggcccatg ttctcggcgt
     2461 tgatccggaa gtaggcctgg agcggcatct cgacgtgggt gttcgggggc acgtagatga
     2521 aggacccgcc gctccacacc gccgagttca aggcggcgaa cttgtt
//
LOCUS       DATGJT010000034         2708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_626885, whole genome shotgun sequence.
ACCESSION   DATGJT010000034 DATGJT010000000
VERSION     DATGJT010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626885"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..1319)
                     /locus_tag="VKX24_00560"
     CDS             complement(33..1319)
                     /locus_tag="VKX24_00560"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HLJ06999.1"
                     /translation="MTLLCVALPASAAAAKPPERHMEVVQVQGAIDPMVASLIKSSLR
                     RAQTDGASVVILQLDSNGALDTDPFDLVDGVLRSQVPVAVWVGPGKAAARGAAAALVA
                     AASYSAASPNARFGPADPLRLDGKGPADLAGGGFAGLPPRVMTPLRTLAGRRVSGQAA
                     ADQHLVDTVAPTIGDLIVALNGRTVPTAAGPVQLSTAKEIKTKGGPRQTADQPVSFMK
                     LGTLASVQHSLTSPSMVFLLLVVGLSLMVFEFFTVGVGLAGLVGAAAVAGALYGSSHL
                     PVNDVALALLVVSTFGFAVDVQAGHQGFWTGVGAIALLAGSLKLFTGSSELAVPLWLV
                     GLIFVGQIVFMLGGMTVAVRNRFSIPTVGRDSMIGELGEARTDLDPDGVVTVRGAPWR
                     ARTGRGHPVSKGGPVRVVAVDRLVLQVEPGDAAAEV"
     gene            1368..2327
                     /locus_tag="VKX24_00565"
     CDS             1368..2327
                     /locus_tag="VKX24_00565"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsA-related P-loop ATPase"
                     /protein_id="HLJ07000.1"
                     /translation="MELAEWCSSSRVIIVAGKGGVGKTTTAAALAVAAARAGRRALLI
                     ELDGKSGLGSMFGVDTTDGEVEAYPGVTVLPLAPDEALIEYLEGHGLRRMSKRLVHSG
                     ALDIVATAVPGMKEILVLGKVKALQRAAAADVIVVDGPAAGHAVTFLLSPKGLLDAVR
                     VGPVLTQAVEVSEMLADPDRAQVMLVTLPEETPVNETAETAEALVDRIGLTLGPLVVN
                     GLYPDRPLDGLTTPEAVSSVAERAGIGGPLPADEAEQLARAARFLVRRRALQEEQLGR
                     LAERLDLARVVLPFVFSSDIGPGQLEMLADALTAGVGALPVGA"
     gene            2324..>2708
                     /locus_tag="VKX24_00570"
     CDS             2324..>2708
                     /locus_tag="VKX24_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013156296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsA-related P-loop ATPase"
                     /protein_id="HLJ07001.1"
                     /translation="MTSEGEGPGGDGPLGRLAGERPIIVCCGSGGVGKTTTAAVLALA
                     GARRGRDAVVVTIDPARRLANALGLDVLSDTAHEIDRELWDPDGAAPHGGRLSALMLD
                     TKSTFDHLVLKYSADPAQGSRILENR"
BASE COUNT          382 a          968 c         1027 g          331 t
ORIGIN      
        1 caagggtcca gatgcccttc gcaaccgagt gttcacacct cggccgcggc gtccccgggt
       61 tcgacctgga gcacgagtcg gtccaccgcc accacccgga cggggccgcc cttcgacacc
      121 gggtgccccc ggccggtgcg ggcccgccag ggcgcccccc ggacggtcac cacaccgtcg
      181 ggatcgaggt cggtgcgggc ctctccgagc tcgccgatca tcgagtcgcg acccacggtc
      241 gggatcgaga accggttccg cacggccacc gtcatgccgc cgagcatgaa cacgatctgc
      301 ccgacgaaga tcagccccac gagccagagc ggcacggcga gttccgacga gccggtgaag
      361 agcttgagcg aaccggccag gagggcgatg gcgcccacgc cggtccagaa accctggtgc
      421 ccggcctgga cgtcgacggc gaagccgaac gtcgacacca ccaacagggc gagggcgacg
      481 tcgttgaccg gcagatggga cgagccgtag agggcgccgg ccaccgccgc cgcgccgacc
      541 agcccggcga ggccgacgcc gacggtgaag aactcgaaga ccatgagcga cagcccgacg
      601 acgaggagca ggaagaccat cgacgggctg gtgagcgagt gctgcaccga tgccagcgtc
      661 cccagcttca tgaagctgac cggctggtcg gccgtctggc ggggcccgcc cttggtcttg
      721 atctccttgg ccgtcgacag ctggacgggc ccggcggcgg tcggcaccgt cctgccgttg
      781 agggcgacga tgaggtcgcc gatggtgggc gccaccgtgt cgacgaggtg ctggtcggcg
      841 gccgcctgcc cgctcacgcg ccggccggcg agcgtccgca acggcgtcat gacccggggt
      901 gggagcccgg cgaacccgcc gccggccagg tcggccggtc ccttgccgtc gagccgcagg
      961 gggtcggcgg gcccgaaacg ggcgttgggc gaggcggccg agtacgaggc agcggcgacg
     1021 agggcggcgg ccgcaccgcg ggcggcggcc ttgccggggc cgacccagac cgccaccggc
     1081 acctgggagc ggagaacccc gtcgacgagg tcgaacgggt cggtgtcgag cgctccgttc
     1141 gagtcgagct ggaggatgac gacgctggcc ccgtcggtct gggcccgacg gagggagctc
     1201 ttgatcagcg aggcgaccat cgggtcgatc gccccctgga cctggacgac ctccatgtgc
     1261 cgttccggcg gctttgcggc ggccgcgctc gccggaaggg ccacgcagag cagcgtcatc
     1321 agggcgaaga gcgggcgtcg caggggggtc tcctagcatg aagggcgatg gagctggccg
     1381 agtggtgctc ctcgtcccgg gtgatcatcg tggccgggaa gggcggagtg ggcaaaacga
     1441 cgaccgccgc cgccctggcc gtggccgccg cccgggccgg ccggcgggcg ctgctgatcg
     1501 agctggacgg caagtccggg ctcggatcga tgttcggcgt cgacaccacc gacggcgagg
     1561 tcgaggccta cccgggggtg acggtgctgc cgctggcgcc cgacgaggcg ctcatcgagt
     1621 atctcgaagg gcacgggctg cggcggatgt cgaagcgcct ggtccacagc ggggcgctcg
     1681 acatcgtggc caccgccgtc cccggaatga aggagatcct cgtcctgggg aaggtcaagg
     1741 ccctgcagcg ggccgcggcg gccgacgtca tcgtcgtcga cggaccggcc gccgggcacg
     1801 ccgtcacgtt cctgctctcg ccgaaggggc tgctcgacgc ggtgcgggtc ggtcccgtcc
     1861 tcacccaggc ggtggaggtc agcgagatgc tggcggaccc cgaccgggcc caggtcatgc
     1921 tggtgacgct gcccgaggag acgccggtca acgagacggc cgagaccgcc gaggcgctcg
     1981 tcgaccggat cggcctgacg cttggcccgc tcgtcgtgaa cggcctctac cccgaccggc
     2041 cgctcgacgg gctgacgacc ccggaggcgg tttcgtcggt ggcagagcgg gccgggatcg
     2101 gtgggccgct cccggccgac gaggccgagc agctggcccg ggcggcccgc ttcctggtgc
     2161 ggcgccgggc cctgcaggag gagcagctcg ggcgcctggc cgagcggctc gacctggccc
     2221 gggtggtgct gcccttcgtc ttctcgtccg acatcgggcc ggggcagctc gagatgctgg
     2281 ccgacgcgct caccgccggg gtgggcgccc tgccggtcgg ggcatgacgt ccgaggggga
     2341 agggcccggg ggcgacgggc cgctcggccg gctggccggc gagcggccga tcatcgtctg
     2401 ctgcggcagc ggcggagtcg ggaagacgac caccgccgcc gtcctcgccc tggccggcgc
     2461 ccggcggggc cgcgacgccg tcgtcgtcac catcgacccc gctcggcgcc tggccaacgc
     2521 cctcggcctc gacgtcctct ccgacaccgc ccacgagatc gaccgggagc tgtgggaccc
     2581 cgatggcgcc gctccgcacg gcggccggct ctcggcgctg atgctcgaca cgaagtcgac
     2641 gttcgaccac ctcgtcctca agtactccgc cgaccccgcc cagggctccc ggatcctgga
     2701 gaaccgct
//
LOCUS       DATGJT010000035         2843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1146034, whole genome shotgun sequence.
ACCESSION   DATGJT010000035 DATGJT010000000
VERSION     DATGJT010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146034"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VKX24_00575"
     CDS             complement(<1..418)
                     /locus_tag="VKX24_00575"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLJ07002.1"
                     /translation="MRLRLSRDERRRRLLVAAQEVFGEKGYRKTEVEEIVRRAGVTKP
                     MLYRHFPGGKAEVYMEVLDEHLSRMLQKLWEAMESTDVPLEALRRGIEAYLRFAEENP
                     EAFHLLAEASPELDAGIVDRLREVRTSIARGLADSIG"
     gene            481..1032
                     /locus_tag="VKX24_00580"
     CDS             481..1032
                     /locus_tag="VKX24_00580"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07003.1"
                     /translation="MEKLPAKVQRVPATVQRAAEWSETAFREVYSRYIRPVNAYILRR
                     VRNHHDAEDLTAQVFVQALDHLDPSKAGTDSEVASWLFTSARNATANHSRRRRYVVSV
                     EELPEEADESEDPSQAVLDEEVLGQVLDAIAKLPEERRRALVLRFVEQLPHAEIAEVL
                     GRTETSARVLLHRTLATLRKEVS"
     gene            1032..2027
                     /locus_tag="VKX24_00585"
     CDS             1032..2027
                     /locus_tag="VKX24_00585"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:NF012901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HLJ07004.1"
                     /translation="MPGVAGDPAPHVLTGWMFPGQGSQRPGMAAGLESCKELFDIARE
                     TLDIDLGRLCIAVPNPGWPGDLLQPALYATAVGASRALSNRGLCPDAVVGHSLGDYAA
                     LTAAGALAYPDALRLVSLRGKSMLEAARRNPGGMAAVIGLDGDTITSICAGIDDVWVA
                     NLNSPNQTVVSGRDEPLTKVAEACRQAGAKRVVRLEVPIPGHCPLMALAAEELEALLA
                     GIEIKEPICPFYSTVDCAPHSDPDEIRQLLVTVMTSPVRFFETLLAMQSAGVTSLVEV
                     GPARVLCGLARHSVPDMATASVGSDEEADAYELSLNESGPADAPALSPGNGRGEG"
     gene            2031..2411
                     /locus_tag="VKX24_00590"
     CDS             2031..2411
                     /locus_tag="VKX24_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07005.1"
                     /translation="MAEEIDLRAAEKVRVSEKKQAPGRTGSGNADPVWSDTGWDHTFE
                     VVGEGLTVDERLVLSPCEGSLRDRGARVGEYVCAGDVVAKVAGVDGQLVPVHSPFAGW
                     VMGFLLPHGSPVRKREPVLWLRSL"
     gene            2393..>2843
                     /locus_tag="VKX24_00595"
     CDS             2393..>2843
                     /locus_tag="VKX24_00595"
                     /inference="COORDINATES: protein motif:HMM:NF019094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HLJ07006.1"
                     /translation="MASEPVAGVRVALRSLGKAVPERVVTNAEIAGRLGVDPDWIESR
                     TGIRERRYVGPGESTATLGVAAARQALERAGLTPADIDVVVVGTCSPEHQFPSTACVV
                     AHELGMSHAPAFDLSAACSGFVYSLAVGASFTASLGARRVLVIGADAL"
BASE COUNT          414 a          996 c          994 g          439 t
ORIGIN      
        1 cgccgatgct gtcggcgagg ccgcgggcga tcgaggtgcg cacctcgcgc agccggtcga
       61 cgatgccggc gtccagctcg ggcgaggcct cggcgagcag gtggaaggct tcggggttct
      121 cctcggcaaa gcggaggtag gcctcgatgc cccggcgaag ggcttcgagc ggaacgtcgg
      181 tcgactccat cgcttcccac agcttctgga gcatgcgcga aaggtgttcg tccagaactt
      241 ccatgtagac ctccgcctta ccaccgggaa aatgccggta gagcatgggt tttgtgaccc
      301 ctgcccggcg gacgatctcc tcgacttccg tcttccggta gcccttttcg ccaaagacct
      361 cctgggcggc gaccagcagg cggcgtcggc gttcatcccg ggagaggcgt agtcgcatcg
      421 gcatagaagt tacctcaggt aacccgtaac acttcgccat gtggcgtgtc atagctagtg
      481 atggaaaaac ttccggcgaa ggtgcagcgc gtcccggcga cggtgcagcg cgccgccgaa
      541 tggagcgaga cggcgtttcg ggaagtgtac tcccggtaca tccgacctgt gaacgcctac
      601 atcctccggc gggtgcgcaa ccatcacgat gccgaagatc tgaccgcgca agtcttcgtt
      661 caggccctcg accacctcga tccaagcaag gcgggcaccg actccgaggt cgcctcctgg
      721 ttgttcacct ccgcccggaa cgccaccgcc aaccacagcc ggcgccggcg ctacgtggtg
      781 tcggtcgagg agctgcccga ggaggctgac gaatccgagg atccgagcca ggcggtcctc
      841 gacgaggagg tgctgggcca ggtgctcgac gccatcgcca agctgcccga ggagcggcgc
      901 agggcgctgg tcctccgctt cgtcgagcaa ctcccccacg ccgagatcgc cgaggtgctc
      961 ggccggaccg agacctccgc ccgcgtgctc ctgcaccgca cgctcgccac gctgcgcaag
     1021 gaagtctcct agtgcccggc gtcgccgggg acccggctcc tcatgtattg acggggtgga
     1081 tgttcccggg ccagggctcg cagcgcccgg gcatggccgc cgggctcgag tcgtgcaagg
     1141 agctgttcga catcgcccgg gagaccctcg acatcgacct gggccgcctg tgcatcgcgg
     1201 tcccgaaccc gggttggccg ggcgacctgc tccagcccgc cctctacgcc accgccgtcg
     1261 gcgccagccg ggcgctgtcg aaccgggggc tgtgcccgga cgccgtcgtc ggccacagcc
     1321 tgggcgacta cgccgcgctg accgccgccg gggcgctcgc ctacccggac gccctgcgcc
     1381 tggtgtcgct ccggggcaag tcgatgctcg aggcggcgcg caggaatccg ggcgggatgg
     1441 ccgcggtgat cggcctcgac ggggatacca tcacctccat ctgcgccggg atcgacgacg
     1501 tctgggtggc caatttgaac agcccgaatc aaacggtggt gtccggccgg gacgagccgc
     1561 tgaccaaggt cgccgaggcc tgccggcagg ccggcgccaa acgggtggtc cgcctcgagg
     1621 taccgatccc cggccactgc ccgctgatgg cgctggccgc cgaggagttg gaagcgctcc
     1681 tggcgggtat cgagatcaag gaaccgatct gcccgtttta ctcgaccgtc gactgcgcac
     1741 cgcacagtga cccggacgag atccgccagc tgctggtcac cgtgatgacg tcgccggttc
     1801 gcttcttcga gaccctgctg gcgatgcagt ccgccggcgt gacctcgctg gtcgaggtcg
     1861 gtccggcccg cgtcctgtgc ggcctggccc ggcactcggt gcccgacatg gccacggcct
     1921 cagtcggcag cgacgaggag gcggacgcct acgaactgtc gttgaacgaa tccgggccgg
     1981 ctgacgcacc cgctctcagc cccggcaacg ggcgagggga ggggtgattg atggctgagg
     2041 agatcgacct ccgggccgcg gagaaggtgc gggtcagcga gaagaagcag gcgccgggcc
     2101 ggaccggttc ggggaacgcc gacccggtct ggtcggacac cggatgggac cacacctttg
     2161 aggtggtcgg ggagggcctc accgtcgatg agcggctggt gctctccccg tgcgagggat
     2221 cgctccggga ccgtggcgcc cgggtgggcg aatacgtgtg cgccggtgac gtggtcgcca
     2281 aggtggccgg ggtcgacggc cagctggtcc ccgtccattc ccccttcgcc ggttgggtga
     2341 tgggcttcct gctgccccac ggctcgcccg tgcgcaagcg tgaaccggtg ctatggcttc
     2401 ggagcctgta gccggggtcc gggtcgcact ccggagcctt ggcaaggcag tccccgaacg
     2461 cgtcgtcacc aacgcagaga tcgccgggag gctgggcgtt gacccggact ggatcgaatc
     2521 ccgcaccggc atccgggagc gccgctacgt cggccccggc gagtcgaccg ccaccctggg
     2581 cgtcgccgcc gcccgccagg cgctggagcg ggccggcctg acccccgccg acatcgacgt
     2641 cgtcgtcgtc gggacctgct cgcccgagca ccagttcccg tcgaccgcct gcgtggtcgc
     2701 ccacgagctc ggcatgagcc acgccccggc cttcgacctc tcggcggcct gctccgggtt
     2761 cgtctactcg ctggccgtcg gcgcctcgtt caccgccagc ctcggcgccc ggcgggtgct
     2821 ggtgatcggg gccgacgcgc tgt
//
LOCUS       DATGJT010000036         3773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_627004, whole genome shotgun sequence.
ACCESSION   DATGJT010000036 DATGJT010000000
VERSION     DATGJT010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3773
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627004"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VKX24_00600"
     CDS             <1..366
                     /locus_tag="VKX24_00600"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HLJ07007.1"
                     /translation="GLLAGALQKNAGLKFRCEAVELRVETTSTVLTRTAEPGQILRIP
                     INHFEGNFVCDEGTLKELRENDQIVLRYVENPNGSLDDIAGICNEGRNVVGLMPHPER
                     ASEAILGSTDGAVLLRSLL"
     gene            363..905
                     /gene="pyrE"
                     /locus_tag="VKX24_00605"
     CDS             363..905
                     /gene="pyrE"
                     /locus_tag="VKX24_00605"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HLJ07008.1"
                     /translation="MRGPATAELLADLQRFSVREGEFTLASGRQSKWYVDARQVTYRG
                     DCLETVGRAVLEAVEDLAFDAVGGLTLGADPVALAVAACSGKRAFAVRKEAKGHGAGG
                     RMAGPLREGDRVLVVDDAVTTGGSTLQALDAIVEFGGVVVGAACLLDRGGELGAALAE
                     RGIPFFPVLGAPDLGYDFGS"
     gene            complement(902..1348)
                     /locus_tag="VKX24_00610"
     CDS             complement(902..1348)
                     /locus_tag="VKX24_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07009.1"
                     /translation="MSPRASASEPKAPVKRKRSPMSNEHKQALAEGREQGRGVRLYLE
                     ALEKNRPKRGRKRTSDSITKRLDTIEQRLVDADPLTRLHLIQERLNLQNELESLKAKT
                     DLTELEKGFISAAKSYGERKGITHAAWRALGVPPDVLRKAGISRGA"
     gene            1456..3705
                     /gene="purL"
                     /locus_tag="VKX24_00615"
     CDS             1456..3705
                     /gene="purL"
                     /locus_tag="VKX24_00615"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011393544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HLJ07010.1"
                     /translation="MEPRHRLLGLTDDELAAIVRLLGRDPSDLELAMYSVMWSEHCSY
                     KSSRKYLGRFPTEAPWVLVGPGEGAGVIDVGEDLAVALRIESHNHPSAVEPHQGAATG
                     VGGIIRDIFSMGARPIALMDPLRFGPLDVARNRYLVEGVVAGISGYGNSVGVPTVGGE
                     IVFDPCYSANPLVNVFCLGVLPKERLVLARAEGVGNLAVLLGASTGRDGIGGASILAS
                     AGFDEKAAEKRPSVQVGDPFEEKKLIEACLALLDSGLAVGVQDLGAGGLSCAASETAA
                     KAGMGMDVDIARVPRREPGMDPVEVMISESQERMLAIVTPDNLDEVLTLCRRWEIRAS
                     VVGKVTDSGRFRVYEGLFDGAAAAEPLCDVPAESLGDGPVYDRPAARPSGQDGLVSAD
                     PLPALAERFPAGADLGPELLGLLSLPNIGDSSWVWRQYDHQLFLNTVSGPGADAAVLR
                     LRGTEKALALTTDGKARFCLLDPRTGGALAVLEAARNVACTGARPLALVNCLNFGNPE
                     HPEVMWQFAEVVDGIAEACRRLGFPVIGGNVSFYNESGGADIHPTPVVAVVGLIDRLD
                     RPVPAAALAPGTRIVVLGETAAELGGSEWAAGRHGLVGGMPPSADLDAGARLHGVVAG
                     LVGERAVAGVHDCSDGGLAVALAEMAIAGGCGFSVAAEGGLAALGPAVACFSESANRV
                     VLSVEPARLDGILARAAAAGVPAADIGSAGGDRMIWAGAFDVALADAERAWRDALPSA
                     LQGGLTPAV"
BASE COUNT          492 a         1284 c         1386 g          611 t
ORIGIN      
        1 ggtttactgg ccggggcatt gcagaagaac gccggtctca aattccgctg cgaggccgtc
       61 gagctccgcg tcgagaccac ctcgacggtt ctgacccgca ccgccgagcc cggccagatc
      121 ctgcgaatac cgatcaacca cttcgagggc aacttcgtct gtgacgaggg cacgctcaag
      181 gagctgcggg agaacgacca gatcgtcctg cgctacgtcg agaatcccaa tggaagcctc
      241 gacgacatcg ccggaatctg caatgaaggc cgcaacgtcg tcgggttgat gccgcatccc
      301 gaacgggcgt cggaggccat cctcggttcg accgacggcg ccgtcctgct gcggtcgctg
      361 ctgtgagggg cccggccact gccgagctgc tcgccgacct ccagcggttc tcggtgcggg
      421 aaggcgaatt cacgctggcc tcgggccgcc agtcgaagtg gtacgtcgac gcccggcagg
      481 tcacctaccg gggcgactgc ctcgagaccg tgggtcgggc ggtgttggag gcggtggagg
      541 acctggcctt cgacgccgtc ggcggtctga ccctcggcgc ggatccggtg gcgctggcgg
      601 tggcggcctg ctccgggaag cgggccttcg ccgtgcgcaa ggaagccaag ggccacggcg
      661 ccgggggccg gatggcgggc cccctccggg agggcgaccg cgtcctcgtc gtcgacgacg
      721 ccgtgaccac cggcggcagc acgctgcagg cgctggacgc gatcgtcgag ttcggcggtg
      781 tggtggtggg ggcggcgtgc ctgctcgacc ggggcgggga gctgggcgcg gcgctcgccg
      841 agcgcggcat ccccttcttt ccggtgctcg gcgcgccgga cctcggctat gacttcggca
      901 gttaagcgcc ccggctgatc ccggccttgc gcagcacgtc gggcgggacg ccgagcgccc
      961 gccaggcggc gtgcgtgatg cccttccgct cgccgtagct cttggccgcg ctgatgaagc
     1021 ctttttcgag ttcggtgagg tcggttttgg ccttcaggct ctccaactcg ttctgcaggt
     1081 tcagccgttc ctggatcagg tggagccggg tgagcgggtc ggcgtcgacc aggcgctgct
     1141 caatggtgtc gagccgcttg gtaatggaat cggaggtgcg cttgcggccc cgcttcgggc
     1201 ggttcttctc cagcgcttcg aggtaaagcc ggacgccccg gccctgttct cgaccctcgg
     1261 ccaaggcctg cttgtgctcg ttggacatcg gtgagcgctt gcgcttgacc ggagccttcg
     1321 gttcggatgc ggatgctctg gggctcacct gattcctccg ataacccagt gacgtttctc
     1381 gccggatatg tagcacacat cttgcaacca cgacgacaaa tagacaagag caggatgtcg
     1441 attaggctct cttgagtgga accgagacac cgcctcctgg gtttgaccga cgacgaactg
     1501 gccgccatcg tgcgcctgct ggggcgggac ccgtccgacc tggaactggc catgtactcg
     1561 gtgatgtggt cggaacactg ctcctacaag tcgtcccgta aatacctggg ccgttttccg
     1621 accgaggccc cctgggtgct ggtcggcccg ggggagggcg cgggggtgat cgacgtcggc
     1681 gaggatctgg ccgtggccct gcggatcgag agccacaacc atccgtcggc ggtggagccc
     1741 caccaggggg cggccaccgg cgtcggcggg atcatccgcg acattttctc catgggggcc
     1801 cgtcctatcg ctctgatgga ccccctgcgt ttcggcccgc tcgacgtcgc ccgcaaccgc
     1861 tatctggtcg aaggtgtggt cgccgggatc tccggctatg gcaattcggt cggcgtaccc
     1921 accgtcggcg gggaaatcgt cttcgacccc tgctacagcg ccaatcccct ggtgaacgtt
     1981 ttctgtctcg gcgtgctccc caaagagcgc ctggtgctgg cccgggccga aggtgtcggg
     2041 aacttggcgg tgctgctcgg ggcgtcgacc gggcgcgacg gcatcggcgg ggccagcatc
     2101 ctggcctcgg ccggtttcga cgaaaaggcg gccgagaagc ggccgtcggt ccaggtcggc
     2161 gatccgttcg aggagaagaa gctcatcgag gcctgcctcg ccctgctcga ctccggcctg
     2221 gccgtcggcg tgcaggacct cggcgccggc gggctgtcct gcgccgcctc ggagacggcg
     2281 gccaaggccg ggatggggat ggacgtcgac atcgcccggg tcccccgccg cgagccgggg
     2341 atggacccgg tggaggtgat gatctccgag agccaggagc ggatgctggc catcgtcacg
     2401 ccggacaacc tcgacgaggt cctgaccctg tgccggcggt gggaaatccg ggcctcggtc
     2461 gtcggcaagg tgaccgactc cggccgattc cgggtctacg agggactgtt cgacggcgca
     2521 gcggcggcgg agccgctctg cgacgtgccc gccgagagcc ttggcgacgg gccggtgtac
     2581 gaccggccgg cggcccggcc gtcgggccag gacgggctcg tgtccgccga tccccttccg
     2641 gcgctcgccg agcggttccc ggccggcgcc gacctcgggc ccgagctgct cgggctgctg
     2701 tcgctgccca acatcggcga ctcgtcgtgg gtctggcggc agtacgacca ccagctgttc
     2761 ctcaacaccg tgagcgggcc gggagccgac gccgccgtcc tacggctgcg gggcacggag
     2821 aaagcactgg cgctgaccac cgacggcaag gcccgcttct gcctgctcga cccccgcacc
     2881 ggcggcgcgc tggcggtcct cgaggcggcc cgcaatgtcg cctgcaccgg cgcccggccg
     2941 ctggcgttgg tgaactgcct gaacttcggc aaccccgagc accccgaagt gatgtggcag
     3001 ttcgccgaag ttgtggacgg aatcgccgaa gcttgccgga ggctcggctt cccggtcatc
     3061 ggcggcaacg tcagcttcta caacgagtcg ggcggcgccg acatccaccc gacgccggtg
     3121 gtggcggtcg tcgggctcat cgaccggctg gaccggccgg tcccggcggc ggccctggcg
     3181 ccgggcaccc gcatcgtcgt cctcggcgaa acggcggcgg agctcggcgg gtcggagtgg
     3241 gcggccggcc gccacggcct cgtcggcggg atgccgccgt ccgccgatct cgacgccggc
     3301 gcgcggctcc acggcgtggt tgcgggactg gtcggcgaac gggccgtggc cggcgtccac
     3361 gactgctccg acgggggtct cgccgtggcg ctggccgaga tggccatcgc cggcggctgc
     3421 ggattctcgg tggcggcgga gggcggcctg gcggccctgg ggccggcagt ggcctgcttc
     3481 tcggagtcgg ccaaccgcgt cgtgctctcg gtcgagcccg cccgcctcga cgggatcctc
     3541 gcccgggcgg cggcggccgg ggtgccggcc gccgacatcg gctcggccgg cggcgaccgg
     3601 atgatctggg ccggcgcctt tgacgtggcg ctggccgacg ccgaacgcgc ctggcgcgac
     3661 gcgctgccgt ccgccttgca gggaggcctt acgccggccg tctagcttcc agggcctcga
     3721 gcaggtcgtc ggcgacgttg aggtcgccga gcgccgtccc gagggcgatg tcg
//
LOCUS       DATGJT010000037         2374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_108884, whole genome shotgun sequence.
ACCESSION   DATGJT010000037 DATGJT010000000
VERSION     DATGJT010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108884"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..944
                     /locus_tag="VKX24_00620"
     CDS             <1..944
                     /locus_tag="VKX24_00620"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLJ07011.1"
                     /translation="FVPGHEIVGTTEDGARVVVEPVLGCAARDITPPCPACAGGSSGR
                     CEHLTVGHLKPGLQTGYCADTGGGWSTALVAHASQLHAVPEALSDEAAVMVEPAACAV
                     HAALRARVPGGGLVAVLGAGTLGLCTVAALRRLTLPGTIIAGAKHVDQQGAARRLGAD
                     VAVEPGEVRRAVRRAARCLTVGERLSGGADVVLDCVGNAASIHEALAITKPGGRVVLV
                     GMPGPERLDLAPLWQREIDLVGAYAYGTEELPDGRRLRTFDVAFELAAAADLGGLVSA
                     RYPLERYREAIEHAATAGSRGAVKIVFEPSVQKEKRR"
     gene            941..>2374
                     /locus_tag="VKX24_00625"
     CDS             941..>2374
                     /locus_tag="VKX24_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020573460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactate racemase domain-containing protein"
                     /protein_id="HLJ07012.1"
                     /translation="MSRPGYVLEVDRSTPPVLFHHGEGFSLERLPVGSRVVYPPEPVK
                     ALADPDAAVRRALLEPLGMDPLPAHLRPGMRLTIAFDDISLPLPPMKSPDNRQRVIEA
                     VLDLAAAAGVDDVELIAATALHRRMTDAELKHAVGQRVFDAFAPHGLLYNHDAEDPDG
                     MALIGHTEEGERVEINRRAATSDLLVYVNINLVAMDGGHKSVATGLAGYPSLKHHHNV
                     RTMQHSRSFMDQHRSALHSSNWRMGRLLAREGPPIFQIETTLNNDTFPKPFDFLQRRE
                     WEWSARDRAAYLAAAAGLERIPRKAARQIFQRILSPHTMASVQAGEVEAVHAATTENV
                     YRSQLVPVEGQTDVLTMGLPYICPYNVNSIMNPILVMCLGLGYFFNLYRGKPLVRQGG
                     VLIMHHPTPWEFHPVHHPSYLDFFEQVLTETTDPTEIEAKFEESFATDPWYIHLYRKS
                     YAYHGVHPFYMWYWGAHALDHLGGVIVV"
BASE COUNT          349 a          907 c          800 g          318 t
ORIGIN      
        1 cgttcgtgcc cgggcacgag atcgtcggta ccacggagga cggcgcccgg gtggtggtcg
       61 aaccggtgct cggctgcgcc gcccgcgaca tcaccccgcc ctgcccggcc tgcgccggcg
      121 ggtcgagcgg ccgctgcgag cacctcaccg tggggcatct caagcccggc ctgcagaccg
      181 gctactgcgc cgacaccggc ggcggctggt cgacggcgct ggtggcccac gccagccagc
      241 tccacgccgt gcccgaggcg ctctccgacg aagcggcggt gatggtggag ccggccgcct
      301 gcgccgtgca cgccgcgctg cgggcccggg tgccgggcgg gggtctcgtg gccgtcctcg
      361 gcgccgggac gctcgggctg tgcaccgttg ccgcgctgcg ccggttaacg ctgccgggca
      421 cgatcatcgc cggcgccaag cacgtcgatc agcaaggggc ggcgcgccgc ctcggcgccg
      481 acgtggcggt cgaaccgggc gaggtccggc gggcggtgcg gagggcggcc cgctgcctga
      541 ccgtggggga gcggctgtcg ggcggcgccg acgtcgtcct cgactgtgtg ggcaacgcgg
      601 cgagcatcca cgaggcgctg gccatcacca agccgggcgg ccgcgtcgtc ctcgtcggca
      661 tgcccgggcc ggagcggctc gacctggcgc ccttgtggca gcgggagatc gacctcgtcg
      721 gcgcctacgc ctacggcacc gaggaactgc ccgacgggcg gcggctgcgc accttcgacg
      781 tcgccttcga gctggccgcc gccgccgacc tcggcgggct cgtgtcggcc cgctatcccc
      841 tggagcgcta ccgggaggcg atcgagcacg ccgcgacggc cggctcccgg ggagcggtga
      901 agatcgtctt cgaaccctca gtgcagaagg agaagcgccg gtgagccggc ccggatacgt
      961 cctcgaggtc gaccgctcga ccccgcccgt cctcttccac cacggcgagg gcttcagcct
     1021 ggagcgcctg ccggtcggct cccgggtcgt ctacccgccg gaaccggtga aggcgctggc
     1081 ggaccccgac gccgccgtgc ggcgggcact gctggagccg ctcggcatgg acccgctccc
     1141 ggcccatctc cggccgggaa tgcggctgac gatcgccttc gacgacatct cgctgccgct
     1201 gccgcccatg aagtcgcccg acaaccgcca gcgggtcatc gaagccgtgc tcgacctggc
     1261 cgccgccgcc ggggtcgacg acgtcgagct gatcgccgcc acggcgctgc accgccgcat
     1321 gaccgacgcc gaactgaaac acgctgtcgg gcaacgggtc ttcgacgcct tcgcccccca
     1381 cggcctcctc tacaaccacg acgccgagga ccccgacggc atggcgctca tcgggcacac
     1441 cgaggagggc gagcgggtcg agatcaaccg ccgggcggca acgtcggacc tcctcgtcta
     1501 cgtcaacatc aacctcgtgg ccatggacgg cggccacaag agcgtggcca ccggcctggc
     1561 cggctacccc agcctcaagc accaccacaa cgtgcggacg atgcagcact cccgctcctt
     1621 catggaccag caccgatcgg cgctgcactc ctcgaactgg cgcatgggcc ggctcctggc
     1681 ccgggagggc ccgccgatct tccagatcga gacgacgctc aacaacgaca cgttccccaa
     1741 gccgttcgac ttcctgcagc ggcgggagtg ggaatggagc gccagggacc gggccgccta
     1801 cctggccgcc gccgccggtc tcgagcggat accccgcaag gccgcccggc agatcttcca
     1861 gcggatcctc tccccccaca ccatggcctc cgtccaggcc ggcgaggtgg aagcggtgca
     1921 cgccgccacc accgagaacg tctaccggtc gcagctggtg ccggtggagg ggcagaccga
     1981 cgtcctcacg atggggctgc cctacatctg cccctacaac gtgaactcga tcatgaaccc
     2041 gatcctggtc atgtgcctgg ggctcggcta cttcttcaac ctctaccggg ggaaacccct
     2101 cgtccggcaa gggggcgtgc tgatcatgca ccaccccacc ccgtgggagt tccaccccgt
     2161 ccaccacccg agctacctcg acttcttcga gcaggtgctg accgagacca ccgacccgac
     2221 cgagatcgag gccaagttcg aggagagctt cgccaccgac ccctggtaca tccacctgta
     2281 ccggaagagc tacgcctacc acggcgtcca cccgttctac atgtggtact ggggggccca
     2341 cgccctcgac cacctcggcg gcgtgatcgt cgtc
//
LOCUS       DATGJT010000038         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1457591, whole genome shotgun sequence.
ACCESSION   DATGJT010000038 DATGJT010000000
VERSION     DATGJT010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457591"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VKX24_00630"
     CDS             complement(<1..213)
                     /locus_tag="VKX24_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07013.1"
                     /translation="MTVMSERADVGGVWLAGSSTGGSLSIILAADDERVRGVATLAAP
                     ASFSEWALHPERLLADARALGIIRHAD"
     gene            complement(235..483)
                     /locus_tag="VKX24_00635"
     CDS             complement(235..483)
                     /locus_tag="VKX24_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07014.1"
                     /translation="MHETFDSDGLRLASHLARPPGFARVPGLVLCHGFPTGPRGGDSS
                     ASTYPELAERLSREAGWAVLTFNFRGTGASEGGFSIDG"
     gene            507..1049
                     /locus_tag="VKX24_00640"
     CDS             507..1049
                     /locus_tag="VKX24_00640"
                     /inference="COORDINATES: protein motif:HMM:NF020398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1802 family protein"
                     /protein_id="HLJ07015.1"
                     /translation="MPDSAVPTLSVPAAVIQALLEGEQIVDVRLDPSAGGPPEATRRL
                     WLRPEPGATPALKPAYRRARELSTPDDAAGSGAVRIAGWAEVTGSAATVLDDKAREAL
                     DGKTILDLHGLAGREVRVLVLRAHRLVEPLTVAPDDLTGLPADPASGPPSEPALSDTA
                     FEARYNGLAQALPGGLAPPG"
     gene            complement(1058..1300)
                     /locus_tag="VKX24_00645"
     CDS             complement(1058..1300)
                     /locus_tag="VKX24_00645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07016.1"
                     /translation="MSRPVRFEHHQYVGDKRTHLVHDLDAATDECRIDDLLASEQFAA
                     FGPDTLAEARNRGYRPHKACTAGSVAEEPAAPADAA"
     gene            complement(1583..2023)
                     /locus_tag="VKX24_00650"
     CDS             complement(1583..2023)
                     /locus_tag="VKX24_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07017.1"
                     /translation="MAVVLGALAVGLVLLIAAVAILRESHRLAALPPRPTFDPDAALE
                     WVVQHLADDAAAQLTVDDVRVILELQLQYFKAKGVSQNGSSANPVGPVVVGGSETVSY
                     ILEHAAARGAEFTPEQVHAVVETQLAYLRAIGAVGSKADDFEDE"
BASE COUNT          296 a          786 c          751 g          278 t
ORIGIN      
        1 gtcggcgtgg cggatgatgc ccagcgcccg ggcgtcggcc agcagccgct cgggatggag
       61 ggcccactcc gagaacgacg ccggcgccgc cagcgtggcc acgccccgga cccgctcgtc
      121 gtcggcggcc aggatgatcg acagcgaccc gccggtgctc gacccggcca gccagacgcc
      181 ccccacgtcg gcccgctccg acatcacggt cacggcgtgt cccaggtcgg ccagctagcc
      241 gtcgatcgag aagccgcctt cggaggcgcc cgtcccccgg aagttgaagg tgaggacggc
      301 ccagcccgcc tcccgggaga gccgctccgc cagttcgggg tacgtcgatg ccgagctgtc
      361 gccgccccgg ggcccggtgg gaaagccgtg gcacagcacc agccccggca cccgggcgaa
      421 cccgggcgga cgggcgaggt gcgaggccag ccggaggccg tcggagtcga aggtctcgtg
      481 catcccgggg gttatcctga cgccccgtgc ccgacagcgc cgtacccacc ctcagcgtcc
      541 ccgccgccgt gatccaggcc ctgctggaag gcgagcagat cgtcgacgtc cggctcgacc
      601 cgtcggccgg cggcccgccg gaagccaccc ggcgcctctg gctccggccc gaacccggcg
      661 ccaccccggc cctcaagccc gcctaccgcc gggcccggga gctctcgacg cccgacgacg
      721 cggccggctc cggcgccgtc cggatcgccg gctgggccga agtcaccggg tcggccgcca
      781 cggtcctcga cgacaaggcc cgggaagcgc tcgacgggaa gacgatcctc gacctccacg
      841 gcctggccgg ccgggaggtg cgggtgctcg tcctgcgggc ccaccggctc gtcgagccgc
      901 tgaccgtggc cccggacgat ctgaccggtc tccccgccga ccccgcctcg ggtccgccca
      961 gcgaaccggc gctgtcggac accgccttcg aagcccgcta caacggcctg gcccaggccc
     1021 tcccaggcgg gctggcacct ccgggctgag gccggggtca ggcggcgtcg gccggggccg
     1081 ccggctcctc ggccaccgag ccggcggtgc aggccttgtg cgggcggtag ccccggttgc
     1141 gggcctcggc cagcgtgtcg ggcccgaagg cggcgaactg ctccgaggcc aggaggtcgt
     1201 cgatcctgca ctcgtcggtg gcggcgtcga ggtcgtggac caggtgcgtc cgcttgtcgc
     1261 cgacgtactg gtggtgctcg aaacggaccg ggcggctcac aggggaaaac aatagttcgg
     1321 gggccctgcc gggcccccga accaaacttt ggctgatcgt tacggccgcc ccgaacagcg
     1381 gtgggcggga ccacttccca ctcgggtgtc ggcagcagtg cggcggtgga attccgccag
     1441 gcggtccagc ctgtacggcc tagcggccgc gcacctccga ggtcccagaa ttactatgca
     1501 tccgctggac cacctccttt cttcggtagc ccatttatag caacctcgag gccctcgcgg
     1561 gttacgaatt cgagtcggat gctcactcgt cctcgaagtc gtcagctttg gaccccaccg
     1621 ccccgatcgc ccgcaggtag gccagctggg tctcgacaac ggcgtgcacc tgctcggggg
     1681 tgaactcggc cccccgggcg gcggcgtgct cgaggatgta gctcacggtc tccgagccgc
     1741 cgaccaccac cgggccgacg gggttggcgc tcgagccgtt ctgggacacg cccttggcct
     1801 tgaagtactg gagctggagc tcgaggatca cccggacgtc gtcgacggtg agctgggcgg
     1861 cggcgtcgtc ggcgaggtgc tggaccaccc actccagggc ggcgtcagga tcgaaggtcg
     1921 gacgcggcgg cagcgccgcc agccggtggc tctcccgcag gatcgccacc gcggcgatga
     1981 gcaggaccag cccgaccgcc agggcgccga ggacgaccgc catggcggtt caggctaacg
     2041 actgaggatt tctaaatccc gatcctctgg gccagcagct cccggtggta ggtcgggtcg
     2101 ccgaggtaga g
//
LOCUS       DATGJT010000039         3296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1249736, whole genome shotgun sequence.
ACCESSION   DATGJT010000039 DATGJT010000000
VERSION     DATGJT010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3296
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249736"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VKX24_00655"
     CDS             complement(<1..462)
                     /locus_tag="VKX24_00655"
                     /inference="COORDINATES: protein motif:HMM:NF028473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07018.1"
                     /translation="MRRFLFVGGLAGTLLLGCGVASAAPSGGSLDPSFGNGGIVTTPE
                     GQSPSAAFADGVTSVSGGETVAVGVATGTNGTGVFTLARYRSDGSLDPSFGNGGIVTT
                     DFGLGGDDLAAAVATEPNGNLVVVGQAADSGDTDYSWAVAEYRANGSLDQSF"
     gene            complement(642..1478)
                     /locus_tag="VKX24_00660"
     CDS             complement(642..1478)
                     /locus_tag="VKX24_00660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07019.1"
                     /translation="MTAPTTTLAPLPPGHYSPVGQLRSEWTKLRTVRSTMWSLIATVL
                     AVVGIGALATAVTASHWRNAGIVDRVGFDPTARSLAGLFLGQIVIGVLGVLAMSAEYG
                     TGTIRATLSAIPNRPLVLACKALVFAVVTLVASEILTFGAFFLGQSLLKGSTPYATIG
                     QPGVLRAVVGAGLVLTVLGLFALGLATIIRHTAGAIATYVGALLVLPLILQAFPVSVQ
                     HAVIRYMPLVIGEHMAATVPDARDFGGGTLLTPWVGFGLLCGYAAAALVIGGILMSRR
                     DA"
     gene            complement(1475..2434)
                     /locus_tag="VKX24_00665"
     CDS             complement(1475..2434)
                     /locus_tag="VKX24_00665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013427065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07020.1"
                     /translation="MIEARGLTKRYGKTLAVDSLSFDVRPGQVTGFLGPNGSGKSTTM
                     RLIMGLDLPNAGQAIINGRPYKNLPWPMHEVGALLEAKAIHPGRSAYNHLFMLAQTHG
                     IRRKRVDEVLELVGLTDVAGRRAGKFSLGMGQRLGIAAALLGDPSVLLFDEPVNGLDP
                     EGILWVRTLLRHLAGEGRTVFVSSHLMSEMAITADHVVVIGRGHLIADQPVADLVAQS
                     SGHFVKVRTPDTDRLSGLLTTAGGKVTASADGSIAVSELTAEAIGDLAAEHRVRLHEL
                     TPLRASLEEAFMDLTRDSIEFHGGQAGAAPAAPEPATETEAAR"
     gene            complement(2594..>3296)
                     /locus_tag="VKX24_00670"
     CDS             complement(2594..>3296)
                     /locus_tag="VKX24_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012852811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HLJ07021.1"
                     /translation="VIGVTGSELAVTYGPWRKRAAVVATAYLDAVARAGGIPIVLPAA
                     AGLAETVAGRIDGLLLTGGTDLDPALFGAERHPMTQKPDPGRDRFELDLLDAATRRGL
                     PVLAICRGIQVVNVWRGGSLHQHLPDVGANPDHQADPGTYGRHRVRIDAASRLGAIVG
                     KPDIDAPTSHHQAVDRIGAGLRPCAWTDDDIVEGLEDPDSSYLIAVQWHPEMGDDPVL
                     FESLVVAARDPIPSS"
BASE COUNT          447 a         1132 c         1273 g          444 t
ORIGIN      
        1 gaagctctgg tcgagcgacc cgttggcgcg gtattcggcg acggcccagg agtagtcggt
       61 gtcgccgctg tcggccgcct gaccgaccac gaccaggttg ccgttcggct cggtcgccac
      121 ggcggcggcc aggtcgtcac cgccgagccc gaagtcggtc gtcacgatgc ccccgttgcc
      181 gaagctcggg tcgaggctcc cgtcggagcg gtaccgggcg agggtgaaca cgccggtgcc
      241 gttcgtccct gtggcgaccc ccaccgcgac ggtctcgccc ccactgaccg aggtgacccc
      301 gtcggcaaag gcggcggagg gggactggcc ttcgggcgtg gtcacgatcc cgccgttgcc
      361 gaagctcggg tcgaggctcc ccccgctcgg ggcggccgag gcgacgccgc agccgaggag
      421 cagcgtcccc gcgaggcccc cgacgaacag gaagcgcctc atcctccgct ccaatccagt
      481 cgcgaataga cagatcgagg cacgattctt atgagaacgc gtacaggaac gcaagcggga
      541 gtcctacccg ggtcgggggc gggcgcgcgc cggccgctca gggccgacga ggtccgggct
      601 gggaggggtg gtctgcgccg tccccggcgc cgccggttat ctcaggcgtc ccgccggctc
      661 atcaggatcc cgccgatgac gagcgccgcg gcggcgtagc cgcagagcag gccgaacccc
      721 acccacggcg tgagcagcgt cccgcccccg aagtcccggg cgtccggcac cgtggcggcc
      781 atgtgctccc cgatgacgag cggcatgtag cggatcacgg cgtgctggac cgacaccggg
      841 aaggcctgca ggatcagggg aaggaccagg agcgcaccga cgtaggtggc gatggccccg
      901 gcggtgtgcc tgatgatggt ggccaggccg agggcgaaca gaccgagcac ggtcaggacg
      961 agcccggcgc cgaccaccgc acggagcacc ccgggttggc cgatcgtcgc gtacggggtc
     1021 gaccccttga ggagggactg gccgaggaag aacgccccga aggtgaggat ctcgctggcc
     1081 acgagcgtca ccacggcgaa cacgagcgcc ttgcaggcga gcaccagggg ccggttgggg
     1141 atggccgaca gcgtcgcccg gatcgtcccg gtgccgtact cggcgctcat cgccagcacg
     1201 ccgaggacgc cgatcacgat ctggccgagg aacaggccgg ccaggctccg cgccgtcggg
     1261 tcgaagccga cccggtccac gatcccggcg ttgcgccagt gggaggcggt gaccgcggtg
     1321 gccagcgccc cgatcccgac caccgccaag acggtggcga tcaggctcca catcgtcgag
     1381 cggacggtcc gcagcttcgt ccactcggag cgcagctggc cgaccgggct gtagtggccg
     1441 gggggcagcg gggcgagcgt ggtcgtgggc gcggtcatcg ggccgcctcc gtctcggtgg
     1501 ccggctccgg tgccgccggg gcggcgccgg cctggccgcc gtggaactcg atgctgtcgc
     1561 gggtgaggtc catgaacgcc tcttcgaggg aggcccgcag cggggtgagc tcgtgcaggc
     1621 ggacccggtg ctcggcggcg aggtcgccga tcgcctccgc cgtcagctcg ctgaccgcga
     1681 tgctgccgtc ggccgacgcg gtgaccttgc cgccggcggt ggtgagcagt ccgctcagcc
     1741 ggtcggtgtc gggggtccgc accttcacga agtggcccga gctctgcgct accaggtcgg
     1801 cgaccggttg atcggcgatc aggtggcccc gcccgatcac gacgacgtgg tcggccgtga
     1861 tggccatctc gctcatgagg tggctggaga cgaacaccgt gcgcccctct ccggccaggt
     1921 ggcggaggag ggtccgcacc cagaggatcc cctcggggtc gagcccgttg accggctcgt
     1981 cgaacagcag gacggagggg tcgccgagca gggcggcggc gatgcccagt cgctggccca
     2041 tgccgaggga gaacttcccg gcccgccggc cggcgacgtc ggtcaggccg accagctcga
     2101 gcacctcgtc gacccgcttg cggcggatgc cgtgggtctg ggccagcatg aacaggtggt
     2161 tgtaggcgct gcgaccgggg tggatcgcct tggcctcgag gagggcgccg acctcgtgca
     2221 tcggccaggg caggttcttg taggggcggc cgttgatgat ggcctgcccg gcgttcggga
     2281 ggtcgaggcc catgatgagc cgcatcgtcg tggacttccc ggacccgttc ggcccgagga
     2341 acccggtcac ctggccgggt cgcacgtcga aggacagcga gtcgacggcg agggtcttgc
     2401 cgtagcgctt cgtcaggccg cgcgcttcga tcatgggcgg ctcctcgacg gtgcaaccgt
     2461 cagtggggga accgggccac cctacccccg agggtgcgcg gccccgggtc agcgacggtc
     2521 gctcgtcccc gtctcctggc ctcgggctcg gccgcccggg cccggtgagc gccgacgcgg
     2581 ccggtgatcg aggtcagctg ctcgggatcg gatcccgggc ggcgacgacg aggctctcga
     2641 agagcacggg gtcgtcgccc atctccgggt gccactggac ggcgatgagg taggacgagt
     2701 cggggtcctc gagcccctcg acgatgtcgt cgtcggtcca ggcgcacggg cggagccccg
     2761 cgccgatccg gtcgacggct tggtggtggc tcgtgggggc gtcgatgtcc ggcttgccga
     2821 cgatggcccc cagccggctg gcggcgtcga tccggacccg gtggcgtccg taggtgccgg
     2881 gatctgcctg gtggtccggg ttggcgccca cgtcggggag gtgctggtgg aggctgccgc
     2941 cccgccagac gttgacgacc tggatccccc ggcagatggc gagcacgggg aggccgcgcc
     3001 gggtggcggc gtcgaggagg tcgagctcga accggtcgcg acccgggtcc ggcttctggg
     3061 tcatggggtg gcgttcggcg ccgaagaggg cggggtcgag atccgtcccc cccgtgagga
     3121 gcagaccgtc gatccgcccg gcgacggtct cggcgagacc ggccgcggcg ggcagcacga
     3181 tcgggatccc cccggcccgg gccacggcgt cgaggtaggc ggtggccacg acggccgccc
     3241 gcttcctcca cggcccgtag gtgacggcga gctcgctgcc ggtcacgccg atgacc
//
LOCUS       DATGJT010000040         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_731315, whole genome shotgun sequence.
ACCESSION   DATGJT010000040 DATGJT010000000
VERSION     DATGJT010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_731315"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VKX24_00675"
     CDS             <1..445
                     /locus_tag="VKX24_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020202481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ07022.1"
                     /translation="AGLVLVAPAGFGPEINMDYIDGFVRAAGKKDLKAVLGQLFADES
                     LVSRPLVDGVLRYKRLDGVGELLETLAAGLFPAGRQAAQPGRRLDPRSVPVTVVWGSD
                     DRVIPVAHADAVPGGATVVVLEKAGHMVQMERAGEVNELLLAQLG"
     gene            complement(422..931)
                     /locus_tag="VKX24_00680"
     CDS             complement(422..931)
                     /locus_tag="VKX24_00680"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018332354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HLJ07023.1"
                     /translation="MDRAALQAAQAPLKDEYRNKPEAAVWTLRADGRLGEENVSCSVE
                     TGRALVEAGLHEATGGSGMLACSGDMLLEALVACAGVTLRAVATSLDIPLRGGTVHAE
                     GDLDFRGTLGVSKEAPVGFSSVRLRFDLDTDATEEQLATLLKLTERFCVVYQTLKNSP
                     ALSAQLRQQ"
     gene            970..>2031
                     /locus_tag="VKX24_00685"
     CDS             970..>2031
                     /locus_tag="VKX24_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HLJ07024.1"
                     /translation="MADRPQTIGALRQSGWESRPVKDEVRANAMARMAAGQPVVTGLL
                     GYDETVLPQLENALLAGHDVILLGERGQAKTRIIRSLVELLDEWSPIVAGSEINDDPY
                     HPVSRQARDLVAERGDDTPIEWVHRSRRFGEKLATPDTSIADLIGEVDPIRVAEGRYL
                     ADELTIHYGLVPRTNRGIFAINELPDLAERIQVGLLNVLEERDVQIRGHLVRLDLDLM
                     VVATANPEDYTNRGRIITPLKDRFGAQIRTHYPLDVETEMEVVHQEARTGEGLGLRVQ
                     VPEFMVEIVGTLSHLARQSSKINQRSGVSVRLSIANYETLVANAARRSLRAGEKDVVP
                     RVSDLEALASSTAGKVEIET"
BASE COUNT          308 a          717 c          726 g          280 t
ORIGIN      
        1 ggcgggcctc gtcctcgtcg ccccggcggg gttcggaccg gagatcaaca tggactacat
       61 cgacggcttt gtccgggcgg cgggcaagaa ggacctcaag gcggtgctcg gccagctctt
      121 cgccgacgag tcgctcgtca gccgcccact ggtcgacgga gtcctgcgct acaagcgcct
      181 cgacggcgtc ggcgagctgc tcgagacgct ggccgccggg ttgttccccg ccggccggca
      241 ggcggcccag ccgggccggc gcctcgatcc ccggtcggtg ccggtcaccg tggtctgggg
      301 cagcgacgac cgggtcatcc cggtggccca cgccgacgcc gtccccgggg gggccaccgt
      361 ggtggtgctg gagaaggccg gacacatggt ccagatggag cgggccgggg aggtgaacga
      421 gctactgctg gcgcaactgg gctgacagcg ccggcgaatt cttgagcgtc tggtagacca
      481 cgcagaagcg ctcggtgagc ttcagcagcg tggccagctg ctcctcggtg gcgtcggtgt
      541 cgaggtcgaa gcggaggcgg acggaggaga agccgaccgg cgcttccttg ctcacgccca
      601 gggtgccgcg gaaatcgagg tcgccttcgg cgtgaacggt cccgcccctc agggggatgt
      661 cgagcgacgt cgccaccgcc cggagggtga cgccggcgca ggcgacgagg gcctccagca
      721 gcatgtcgcc cgagcaggcc agcatcccgc tgcctccggt ggcttcgtgc agcccggctt
      781 cgacgagggc ccggccggtc tcgaccgagc agctgacgtt ctcctcaccg agccggccgt
      841 cggcccggag cgtccagacc gccgcctcgg gcttgttgcg gtactcgtcc ttgagcggtg
      901 cctgtgcggc ctgaagcgca gcgcgatcca tggatcggga cggtagcgcg cgctgttacc
      961 ctccgcctca tggccgaccg tccgcagacc atcggagcat tgcgccagtc cggctgggag
     1021 tcccgaccgg tcaaagacga ggtgcgggcc aacgccatgg cgcgcatggc cgccggccaa
     1081 cccgtcgtca ccggcctcct gggctacgac gagacggtgc tcccccagct ggagaacgcc
     1141 ctcctcgccg ggcacgacgt gatcctcctc ggcgagcggg ggcaggccaa gacccgcatc
     1201 atccgctcgc tggtggagct gctcgacgag tggtcgccga tcgtcgccgg gagcgagatc
     1261 aacgacgacc cctaccaccc ggtctcccgg caggcccgcg acctggtggc cgagcggggc
     1321 gacgacacgc ccatcgagtg ggtgcaccgc tcgcggcgct tcggggagaa gctggcgacg
     1381 cccgacacgt cgatcgccga cctcatcggc gaggtcgacc cgatccgggt ggccgagggc
     1441 cgctacctgg ccgacgagct gacgatccac tacggcctcg tgcctcgcac caaccggggg
     1501 atcttcgcca tcaacgagtt gcccgacctc gccgagcgga tccaggtcgg cctgctcaac
     1561 gtgctcgagg agcgcgacgt gcagatccgc gggcacctgg tgcgcctcga cctcgacctg
     1621 atggtggtgg ccacggccaa ccccgaggac tacaccaacc ggggccggat catcacccca
     1681 ttgaaggacc gcttcggcgc ccagatccgc acgcactacc cgctcgacgt ggagaccgag
     1741 atggaggtcg tccaccagga ggcgcgcacg ggcgaggggc tcgggctccg cgtgcaggtg
     1801 cccgaattca tggtcgagat cgtgggcacg ctcagccacc tggcccggca gagctccaag
     1861 atcaaccagc ggtcgggcgt gtccgtgcgg ctatcgatcg ccaactacga gacgctcgtc
     1921 gccaacgccg cccggcgctc gctgcgggcg ggggagaagg acgtcgtccc ccgcgtcagc
     1981 gacctcgagg cgctggcgtc gtcgacggcg ggcaaggtcg agatcgagac g
//
LOCUS       DATGJT010000041         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_731340, whole genome shotgun sequence.
ACCESSION   DATGJT010000041 DATGJT010000000
VERSION     DATGJT010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_731340"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..1624)
                     /gene="obgE"
                     /locus_tag="VKX24_00690"
     CDS             complement(239..1624)
                     /gene="obgE"
                     /locus_tag="VKX24_00690"
                     /inference="COORDINATES: protein motif:HMM:NF008954.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HLJ07025.1"
                     /translation="MPGFVDEAQIHAKAGNGGAGAVSFRREAHVARGGPDGGDGGRGG
                     DVWLEASLNQVSLLPFRDHPHRRAGDGGHGRGARRHGADGKDLVVPVPVGTVVRRGDG
                     TLVADLQSPGDRVVVAEGGRGGRGNARFLSNRRRAPAFAEQGETGEERWLDLELKLVA
                     DVAIVGFPNVGKSTLISRISAARPKVADYPFTTLEPHLGVVRFGRPGSETEFVVADVP
                     GLVEGAAEGRGLGHRFLRHVERARVLLVLVDLASPEDRAPGEQEAVLEDELGRYRREL
                     LERPRLVVGSRADMAGPSSAGWQGPRISALTGDGIDELVGRLAMVVDEARRELEPQLG
                     PAVVHRPVGEVALEVARADDGSFVIGGRAALRAVALSDLTDDDALALVQQRLRRIGVE
                     RALRRAGARDGDTVHVGNMSFTYYRGDPALGAPEDEDADRPRRRSAAERRGRQPQAST
                     EPKPANGGRTA"
     gene            complement(1643..>2087)
                     /locus_tag="VKX24_00695"
     CDS             complement(1643..>2087)
                     /locus_tag="VKX24_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HLJ07026.1"
                     /translation="GGAYLRGYAKSGQVCEIAGFGPVPVATVRRQLPGSFVKIVVKKG
                     VDVVNVCHAGRSVPVHLQTALDERDPACVVPGCDVASGLENHHWQDDYAAGGATSLHN
                     LARVCARHHDLITYGGWCLEGGPQRWRFVPPPDDGSGQQRLEDTG"
BASE COUNT          291 a          764 c          735 g          297 t
ORIGIN      
        1 cgccgcccat cccgccgcga tagcaccgga ggtcaccagg accacggcgt gcccgtcggc
       61 gcgcagctcg gcggcttccc cgcagagctt gtcgacggcg ccttcgtcga gatggcctcc
      121 ggcgtcggtg accgaggacg agccgacctt caccacgatg gtgccggacg tcaccacagc
      181 tgctcccccc gccccaggtg cgctctggcg ccaggctccc gttccctcgt gccgtccgtc
      241 atgcggtccg tcccccgttg gcgggcttgg gctcggtact ggcttgcggc tgtcggccac
      301 gacgttccgc ggcgctgcga cggcgagggc gatcggcatc ctcgtcctcc ggtgccccga
      361 gggcgggatc gccgcggtag taggtgaagc tcatattgcc gacatggacc gtgtcgccgt
      421 ctcttgcccc ggcgcgccga agggcgcgtt cgacaccgat ccgacgcagg cgctgctgca
      481 ccaaggcgag ggcgtcgtcg tcggtcaggt ccgacagggc gacggcgcgc agggcggcgc
      541 ggccaccgat cacgaacgac ccgtcgtcgg ctcgcgccac ctcgagcgcc acctcgccca
      601 cgggccgatg gaccaccgcc gggccgagct ggggctcgag ctcccggcgt gcctcgtcga
      661 cgaccatggc gagccggccg accagctcgt cgatgccgtc gccggtgagg gcggagatgc
      721 gcgggccttg ccagccggcg ctcgagggac cggccatgtc ggcccgggac cccacgacca
      781 accgcggccg ttcgagcagc tcgcggcggt agcgcccgag ctcgtcctcg agcaccgctt
      841 cctgttcgcc aggggcgcgg tcctcgggtg aggcgaggtc gacgagtacg agcaaaaccc
      901 gggcgcgctc gacgtggcgc aggaagcgat gcccgaggcc gcggccttcg gcggcgccct
      961 ccacgagccc gggcacgtca gccacgacga actccgtctc cgatccgggc cggccgaacc
     1021 ggaccacacc gagatggggc tcgagggtgg tgaagggata gtcggcgacc ttgggacggg
     1081 cggccgagat gcgggagatg agcgtgctct tgccgacgtt cgggaacccg acgatggcga
     1141 catcggcaac cagcttgagc tcgaggtcga gccagcgctc ctccccggtc tcgccctgct
     1201 cggcgaaagc cggtgcgcgc cggcggttgc tgaggaatcg ggcgttcccg cggccgcccc
     1261 tgcccccttc ggccaccacg accctgtcgc cgggcgactg caggtcggcg acgagggttc
     1321 cgtcgccccg gcggaccacc gtgccgacgg ggacgggtac cacgaggtcc ttgccgtccg
     1381 cgccgtggcg ccgggctccg cggccgtggc ccccgtcgcc ggctcgacga tgaggatggt
     1441 cgcgaaaggg cagcagcgag acctggttca gcgaggcttc gagccacacg tcgcctcctc
     1501 ggcctccgtc accaccgtcg ggcccgccgc gcgccacatg tgcctcgcgg cggaacgaaa
     1561 cggctcccgc cccgccgttc ccggcctttg cgtggatctg tgcttcgtcg acgaagcccg
     1621 gcacgcgagg cgatgttagt tgtcagccgg tgtcttccag gcgttgctgg cccgacccgt
     1681 cgtcgggagg cggaacgaat cgccaccgct ggggaccacc ttcgaggcac cagcccccat
     1741 aggtgatgag atcgtgatgg cgtgcgcaga ctcgtgccag gttgtggagg ctcgtggcac
     1801 ccccggcggc gtagtcgtcc tgccaatgat ggttctcgag ccccgaggcg acgtcacaac
     1861 ccggcacgac gcacgccggg tcgcgctcgt cgagagcggt ctggaggtgc acaggcacac
     1921 tgcgccctgc atggcacacg ttgacgacgt cgaccccttt cttcacgacg atcttgacga
     1981 aagagcccgg gagctggcgc cggacggttg cgaccgggac cggcccgaag ccagcgatct
     2041 cgcacacctg tcccgacttt gcatagccac ggaggtaggc cccgccg
//
LOCUS       DATGJT010000042         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_5291,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000042 DATGJT010000000
VERSION     DATGJT010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5291"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1899)
                     /locus_tag="VKX24_00700"
     CDS             complement(28..1899)
                     /locus_tag="VKX24_00700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07027.1"
                     /translation="MVGLAALAMLTAYAGISNGSPYRPDMPKATVQALEAVNNAKGVP
                     DVAQNLVPGALAERDAAEAAYRAAGPAADPLSKPEYIVAWAGKMTAGDVSGSDVARAS
                     SGTLTGQDLARLARSGIKPGLDAMVVVDGRKHNADGSQSDSYGKVVNFVEVPPPFGVE
                     GEPHHMQYDWEDGEPLVAGGLFNDVTTVWDVSRIPEVHLTNVIRPEETPQGTVPDAYD
                     FLPDGRAIGTYMGGPNMNYAGSPGSVVVLKPEPAKGLVFDSETPAGTPGAVDSSNAGG
                     VPEPCSKVEAMPAGTCANPHGIQIRGDLGRMVTADYAEPRELVTDPAKAYKPATFRPT
                     VRIWDVTNPSRPRLVSVAHMPKGPEQAEQGPGNIAIMETAKTHGTAKGAFAGASCGGG
                     IFFTPDITALKGDSSAAWKEVFSDDMAILHAGGPRPMEKGGCDGGSWHQVSQDNRFLF
                     RTVMGRNPGSTDSFDHGTAKVIYVLDIQKLIAGAARGHVDCSIDTLEEIERGQGDEAD
                     CPRLVSVLRVDDSSNGGPHWGAIDNHSLTPTGAPTRLVFSDSFVARTGVDGNHRMYMV
                     NVDPATGALSYDESFRDEQTGDLGVGFNRRNWPHNPDLGFYKPHAMVWVCPPGVCPR"
BASE COUNT          278 a          716 c          769 g          348 t
ORIGIN      
        1 cggcgacggc gacggcgacg gcgacgacta ccgggggcag acccccggcg ggcagaccca
       61 gaccatggcg tgcggcttgt agaagccgag gtcggggttg tggggccaat tgcggcggtt
      121 gaagccgacg ccgaggtcgc cggtctgctc gtcccggaac gattcgtcgt aggacagcgc
      181 gccggtggcg gggtcgacgt tgaccatgta catgcggtgg ttgccgtcca cgccggtccg
      241 ggccacgaac gagtcggaga agacgagccg ggtcggagct ccggtcggcg tcaggctgtg
      301 gttgtcgatg gcgccccagt gcggcccgcc gttgctgctg tcgtcgaccc gcaggaccga
      361 caccagccgg gggcagtcgg cctcgtcgcc ctgaccccgc tcgatctcct ccagcgtgtc
      421 gatgctgcag tcgacgtggc cgcgggcggc gccggcgatc agcttctgta tgtcgagcac
      481 gtagatgacc ttggccgtgc cgtggtcgaa gctgtcggtc gagccggggt tgcggcccat
      541 gaccgtccgg aagaggaagc ggttgtcctg gctgacctgg tgccacgagc ctccgtcgca
      601 cccgcccttc tccatggggc ggggaccccc ggcatggaga atggccatgt cgtcgctgaa
      661 gacctccttc cacgccgcgc tcgagtcacc cttcagggcc gtgatgtccg gggtgaagaa
      721 gatgccaccg ccgcagctgg cgccggcgaa ggcccccttg gccgtgccgt gcgtcttggc
      781 cgtttccatg atggcgatgt ttcccgggcc ctgctccgcc tgctccgggc ccttcggcat
      841 gtgcgccacc gacaccaagc ggggtctcga cggattcgtg acgtcccaga tccgcaccgt
      901 gggccggaac gtggcgggct tgtaggcctt ggcggggtcg gtcaccagct cccgcggttc
      961 ggcgtagtcc gccgtcacca tccgcccgag gtcgccccga atctggatgc cgtgggggtt
     1021 ggcgcaggtg ccggccggca tggcttcgac cttcgagcag ggctccggga cgccgccggc
     1081 gttggaggag tcgaccgcgc cgggggtccc ggccggcgtc tcactgtcga agacgaggcc
     1141 cttggccggc tcgggcttga gcaccacgac cgatcccggg gaaccggcgt agttcatgtt
     1201 cgggccaccc atgtaggtgc cgatggcccg cccgtccggc aggaagtcgt aggcgtccgg
     1261 gacggtcccc tgcggggtct cctccggccg gatcacgttg gtgagatgga cctcggggat
     1321 gcgggagacg tcccacaccg tggtgacgtc gttgaagagg ccgccggcca cgagcggttc
     1381 cccgtcctcc cagtcgtact gcatgtggtg cggttcgccc tcgacgccga aggggggcgg
     1441 gacctccacg aagttgacga ccttgccgta ggaatccgac tggctcccgt cggcgttgtg
     1501 cttgcggccg tcgaccacga ccatggcgtc gaggcccggc ttgatgccgc tccgggccag
     1561 cctggccagg tcctgtccgg tgagggtgcc ggaggaggcg cgggccacgt cgctgcccga
     1621 cacgtcaccg gcggtcatct tgccggccca ggccacgatg tactccggct tcgacagcgg
     1681 gtcggcggcc ggtccggccg cccggtaggc ggcctccgcg gcgtcgcgct cggcgagcgc
     1741 tcccggcacg agattctggg cgacgtcggg gacgcccttg gcgttgttga cggcctccag
     1801 cgcctgcacg gtggccttcg gcatgtcggg tcgatagggc gacccgttcg agatcccggc
     1861 gtaggcggtg agcatggcca gcgcggcgag tccgaccacc agcgatcgac cccgggcgcg
     1921 gcgacgtgaa ccgacgatgc gacccatgtc gattttccct tcctcgtcct agagagacga
     1981 ggtgggccgc cggggaggga gcattctccg gcgacccacc aaaccgtctc cctccgtcgc
     2041 ctacctcccg gcggcgacct gcttgatggc cttgcgaatg cggaagtacg tcccgcagcg
     2101 gcagaggttg c
//
LOCUS       DATGJT010000043         3411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_317153, whole genome shotgun sequence.
ACCESSION   DATGJT010000043 DATGJT010000000
VERSION     DATGJT010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3411
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317153"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..566
                     /locus_tag="VKX24_00705"
     CDS             <1..566
                     /locus_tag="VKX24_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008438209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase dimerization domain-containing
                     protein"
                     /protein_id="HLJ07028.1"
                     /translation="TIVSREVAPSQSAVVTVGALQAGTKENVIPDEAIIKLNVRTFDE
                     ATRKHVLDAIKRIVDAEAEASGASRAPEITPLDRYQLVRNDRSAAERVRTALQDHFGE
                     DRVVTIPPISASEDFGTFGSEWGVPSVFWTIGGTDPDAYQQAKEAGRISELPTNHNPR
                     FAPVLHPTLATGVETLVTAAGAWLATA"
     gene            610..1233
                     /locus_tag="VKX24_00710"
     CDS             610..1233
                     /locus_tag="VKX24_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014813589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HLJ07029.1"
                     /translation="MLLVLNLAGTFVFGLSGGLAAVQAELDIFGVMVLAIVVGLAGGI
                     TRDVLIGIPPQTIRDWRYVVVGGASGLFTFVAHAGLKRLERPILILDAGGLALFCVTG
                     ASTALDHRVGALEAVLLGAMTGVGGGALRDVLLRQIPVVLRTGLYAIPALIGAAIVVI
                     AAKSGTHNFAFPILGATVCFAIRVAGIYLNLNVPRAARHDDGEAKES"
     gene            1441..1944
                     /locus_tag="VKX24_00715"
                     /pseudo
     CDS             1441..1944
                     /locus_tag="VKX24_00715"
                     /inference="COORDINATES: protein motif:HMM:NF039533.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2165..2848
                     /locus_tag="VKX24_00720"
     CDS             2165..2848
                     /locus_tag="VKX24_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07030.1"
                     /translation="MTVSRVLVAEDDRATRESVSRALELEGYDVSAVADGAAALETLD
                     AERPDLLVLDLMMPRVDGLTVCRRLRSQGDRLPILVLTARTEVSDRVSGLDAGADDYI
                     PKPFVLDEFLARVRALLRRASYDEPDRAMAVADLRVDSAARRAWRGVRELDLTKTEFD
                     LLDLLVRNAGIVLTHTTIYERIWGYDFGPDSKALGVYVGYLRRKLEQDGERRLLQTVR
                     GVGYTLRAP"
     gene            2845..>3411
                     /locus_tag="VKX24_00725"
     CDS             2845..>3411
                     /locus_tag="VKX24_00725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07031.1"
                     /translation="MTLRARLALALAVLAAVSVIVVSWLGYVATVHRLNAETDAGLVS
                     YANRLADPDGRLAAILCGRVTGFDDPDDGGVLPDLPGASVECEPAPAHAAVPNAPTQV
                     VRGAVTLGTVTSHGRRYRLLSVPLADGRTIRITRSEADTDRVLDSLYRRYVGVGLAAI
                     GLAALAGWLIARQATRPVARLTGAAEEIA"
BASE COUNT          523 a         1204 c         1148 g          536 t
ORIGIN      
        1 agacgatcgt gtcacgggag gtcgcgccct cacagtcggc ggtcgtcacc gtcggcgcgc
       61 ttcaggcggg gacgaaggag aacgtcatcc cggacgaagc gatcatcaag ctgaacgtcc
      121 ggaccttcga cgaggccacc cggaaacacg tactcgacgc gatcaagcgg atcgtcgacg
      181 ctgaagcgga ggcgtcgggt gcatccagag cgccggagat cacgccgctc gatcgttatc
      241 agctcgtccg caacgatcgc agcgccgctg agcgggtgcg caccgcgttg caagaccact
      301 ttggcgaaga ccgggtcgtc acgatccctc cgatctcggc cagcgaggac ttcggaacgt
      361 tcggcagcga gtggggtgtg ccgtcggttt tctggaccat cggcggcacc gatccggacg
      421 cgtaccagca ggcgaaggaa gcgggccgga tatccgaact gcccaccaac cacaacccac
      481 ggttcgcccc ggtgctccat cccacactgg cgacgggggt agagacgttg gtcaccgcgg
      541 ccggcgcgtg gctcgccacc gcctaacact tccgacgtga cctccgtact gcatggcttc
      601 gacccgacgg tgctgctggt tctcaacctg gccgggacgt tcgtcttcgg actgagcggc
      661 gggttggcgg ccgtacaggc ggaactcgac atcttcggcg tcatggtgct cgccatcgtg
      721 gttgggctcg cgggcggaat cacccgggac gttctcatcg gcatcccgcc ccaaacgatc
      781 cgcgactggc gctacgtcgt ggtgggcggc gcctccgggc tcttcacgtt cgtcgcccac
      841 gccggcctca agcggctcga acggccgatc ctcatcctcg acgccggagg actggcgctc
      901 ttctgcgtca ccggtgcgag caccgccctc gatcatcgcg tcggcgcgct ggaggccgtc
      961 cttctggggg ccatgaccgg agtcggcgga ggcgctctgc gtgacgtgct cctgcgccag
     1021 attccggtcg tgctgcgtac gggcctctac gcaatcccgg cgctgatcgg agcggcgatc
     1081 gtcgtcatcg ccgcgaagag tggcacgcac aacttcgcgt tcccgatcct cggggcgacc
     1141 gtgtgcttcg ccatccgcgt cgctggcatc tacttgaacc tgaacgtacc ccgggcggcc
     1201 aggcacgatg acggcgaggc aaaggaatcg tagtgcttgg aagtctgtca ttaagtgcaa
     1261 gccagtccag tccgaatgct gggccggacg gctgccgtag gtgtcgtggg ccagcgcgac
     1321 gagtggcggc ggccgccgcc ggccaacacc gcgagatgaa ccgatggaaa cccgcactca
     1381 acgcctccgc catcaccttc gaagaccgga tcttcaccag caaccagtga caacgccgag
     1441 ctcagttaca ccgttatccg gacactctcc acgacgacgg cagcggccaa cgactccggt
     1501 gtctggaagg tgcccgtcga tctcagcgcc ctggccgacg gcacgatcag cgccacggcg
     1561 acggccaccg acgcggcagg caacgtcagc gcggactccg ggatccagac cgccctcaag
     1621 gacaccatcg ggccgtcgct cgataccgtg gccggcgcca acctgagctc cgtcctcacg
     1681 ctgacgttca gcgaacccgt ccggtgctcc agcctgaccc tcgaggcgtt cgtggtcacg
     1741 gtcaacggcg tgctccccga cgtcttcctg ggcctgagcg gctgcggagg tacctcgagc
     1801 acgacggtga cgctcaccgg aggactgctg ctgcaccgga gatacgctcc acggtgccgc
     1861 ctgcggcaac tggggaaccc ggttcactcc gtggcacggg accggatgtg ccttcccccg
     1921 gttgcggtcc gagtccgggg atgagaatca ccctgtcaca ccgacgatag gagcgacatt
     1981 ggagcgtgtc atgcgcctgg tccgacattc ttcgctggcg tccgcggggg cgaagaccgt
     2041 ctgcccgacg gtcggatcac ttttcgccgg cccctgggct ccgccaccgg aggagttgag
     2101 aaagcgggcc ggcaccgtcc ggagcgggat ctcttgcctt tcccttaccc gtgtcctgta
     2161 gaccatgacc gtgagccggg tgctcgtggc cgaagacgac cgggcgacga gagagtcggt
     2221 cagccgcgcc ctcgagctcg agggctatga cgtgtccgcc gtcgccgacg gcgccgcggc
     2281 cctcgagacc ctcgacgccg aacggcccga cctgctggtt ctcgacctga tgatgccgag
     2341 ggttgacggt ctcacggtgt gccgccgact gcgctctcag ggggaccgcc tgccgattct
     2401 cgttctcacg gcccggaccg aggtgtcgga ccgggtgtcg ggcctcgacg cgggagccga
     2461 cgactacatc cccaagccgt tcgtgctcga cgagttcctg gcccgggtcc gggcgctgct
     2521 gcgccgggcg agctacgacg aaccggaccg ggccatggcc gtggccgacc tgcgggtcga
     2581 cagcgcggcg cgccgggcgt ggcggggggt gcgggaactg gatctgacca agaccgagtt
     2641 cgacctgctc gacctcctcg tccgcaacgc ggggatcgtc ctcacccaca cgacgatcta
     2701 cgagcgcatc tggggctatg acttcggccc cgactcgaag gccctcgggg tgtacgtcgg
     2761 ctacctgcgc cgcaagctgg aacaggacgg cgagcggcga ctgctccaga ccgtgcgggg
     2821 cgtgggctac acgctgcggg cgccatgacg ctccgggcga ggctggcgct ggccctggcc
     2881 gtgctggcgg cggtctcggt catcgtcgtg tcgtggctcg gctatgtggc cacggtccac
     2941 cgcctcaacg ccgagacgga cgccggcctc gtcagctacg ccaaccgtct cgccgatccc
     3001 gacgggaggc tggccgccat cctctgcgga cgggtcaccg gcttcgacga ccccgacgac
     3061 ggcggcgtcc tccccgacct gccgggggcg tcggtcgagt gtgagccggc accggcgcat
     3121 gccgccgttc ccaacgcacc gacccaggtc gtgcggggcg ccgtgacgtt gggcaccgtg
     3181 acgagccatg ggaggcgcta ccgcctgctc tcggttcccc tggccgatgg ccgcacgatc
     3241 cgcatcaccc gcagcgaggc cgacaccgac cgggttctcg actcgctgta ccggcgctac
     3301 gtcggcgtcg ggctggccgc catcgggctc gccgccctgg ccgggtggct catcgcccgc
     3361 caggccaccc ggccggtggc ccgcctcacc ggagcggccg aggagatcgc c
//
LOCUS       DATGJT010000044         2103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1146814, whole genome shotgun sequence.
ACCESSION   DATGJT010000044 DATGJT010000000
VERSION     DATGJT010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146814"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1369
                     /locus_tag="VKX24_00730"
     CDS             <1..1369
                     /locus_tag="VKX24_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003054889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07032.1"
                     /translation="GERVAIVSPNSARFLISYFGVSGFGRILVPVNYRLTADEIGYIV
                     EHSGSSVVLFDPELDEITDRITTAKWVRLDGVQDADLFDPENGRRSDPAGWEADEDAT
                     CSINYTSGTTSRPKGVQLTHRNCWLNAASFGWHMGVSDRDVLLHTLPMFHANGWGMPY
                     AMTAMGGRHVVQRKIDGEVILSRIEQEGVTILCAAPAVVASILAASEARRAGGRLLPA
                     VPVRIVVAGAPPPSKTIERVETELGWEFVQIYGLTETSPLLTINRAPAEWDDLEASER
                     ARLLSRAGVPAVGVKMGVDDEGEVLARSNHVFEGYWEQPDESAKALEGGWFHTGDGGY
                     EDGPYTVITDRKKDVIITGGENVSSIEVEDVLYQHPAVAEAAVIGVPDEKWGESVKAL
                     VVLRPGTSATEQELIEHCRDRMAHFKAPRSIEIRDALARTATGKLQKYKLRQPYWEGR
                     DRQVN"
     gene            complement(1362..1721)
                     /locus_tag="VKX24_00735"
     CDS             complement(1362..1721)
                     /locus_tag="VKX24_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014101285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannose isomerase type II C-terminal
                     cupin domain"
                     /protein_id="HLJ07033.1"
                     /translation="MESHRRPWGEFEVLSETPTHKVKRLTVEPGKRLSYQRHRHRSEH
                     WFVVGGRGVATVEGVAHAIGPGDAVDVPAGAAHRIESSGPDPLVFVEVQHGTSFEEED
                     IERLQDDYGRAPRAGLS"
     gene            1814..>2103
                     /locus_tag="VKX24_00740"
     CDS             1814..>2103
                     /locus_tag="VKX24_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ07034.1"
                     /translation="MEVTFFGTRGSCPCSGSCYQRYGGNTPSVLVRTDSEIIVLDLGS
                     GLRALGAHVSSDHPGGGPPVRATALLTHLHFDHILGLPFFGPLRHHDSVFEI"
BASE COUNT          308 a          741 c          754 g          300 t
ORIGIN      
        1 cggggagcgg gtcgccatcg tcagcccgaa ctccgcccgg ttcctcatca gctacttcgg
       61 cgtgagcggg ttcggccgga tcctggtgcc ggtcaactac cggctgacgg cggacgagat
      121 cggctacatc gtggagcact ccggctcgag cgtcgtgctg ttcgaccccg agctcgatga
      181 gatcaccgac cgcatcacca cggcgaagtg ggtccggctc gacggcgtcc aggacgccga
      241 cctgttcgac ccggagaacg gccggcggag cgacccggcg ggctgggagg ccgacgagga
      301 cgccacctgc tcgatcaact acacctcggg gaccacctcg cggccgaagg gcgtccagct
      361 cacccaccgg aactgctggc tcaacgccgc cagcttcggg tggcacatgg gggtgtccga
      421 ccgcgacgtg ctgctccaca cgctgccgat gttccatgcc aacggatggg gcatgcccta
      481 cgccatgacc gccatgggcg gccgccacgt cgtgcagcgc aagatcgacg gcgaggtgat
      541 cctctcccgc atcgagcagg agggggtgac gatcctgtgc gccgcgccgg ccgtggtggc
      601 gtcgatcctg gcggcgtccg aggcccgccg ggccgggggc cgccttctgc cggccgtccc
      661 cgtgcgcatc gtcgtggccg gggcgccgcc cccgtccaag accatcgagc gggtcgagac
      721 cgagctcggg tgggagttcg tccagatcta cgggctgacc gagacctctc cgttgctcac
      781 catcaaccgc gccccggccg agtgggacga cctggaggcg tcggagcggg cgcgcctgct
      841 cagccgcgcc ggggtcccgg ccgtcggggt gaagatgggg gtcgacgacg agggcgaggt
      901 gctggcgcgc tcgaaccacg tgttcgaggg ctactgggag cagcccgacg agtcggccaa
      961 ggccctcgag ggcggctggt tccacaccgg cgacggcggt tacgaggacg gcccgtacac
     1021 cgtgatcacg gaccgcaaga aggacgtcat catcaccggc ggcgagaacg tctcgtcgat
     1081 cgaagtcgaa gacgtcctct accagcaccc cgccgtggcg gaggcggcgg tgatcggggt
     1141 ccccgacgag aagtggggcg agtcggtgaa ggccctcgtg gtcctgcggc ccgggacctc
     1201 agcgaccgag caggagctca tcgagcactg ccgcgaccgg atggcgcact tcaaggcgcc
     1261 ccgcagcatc gagatccgcg acgcgctggc ccggaccgcc accggcaagc tgcagaagta
     1321 caagctgcgg cagccctact gggaggggcg ggaccgccag gtcaactgag acccgccctg
     1381 ggggcccggc cgtagtcgtc ctgcaggcgc tcgatgtcct cctcttcgaa gctcgtcccg
     1441 tgctggacct cgacgaagac gagggggtcg ggcccgctgc tctcgatgcg gtgggcggct
     1501 cccgcgggca cgtcgacggc gtcgcccggc ccgatcgcgt gcgccacccc ctcgacggtg
     1561 gcgacgcccc ggccccccac gacgaaccag tgctcggagc ggtggcggtg gcgctggtaa
     1621 ctgaggcgct tcccgggctc gacggtcagc cgcttgacct tgtgggtcgg ggtctccgac
     1681 aggacctcga actcccccca cggccggcga tggctctcca tggccagatt gtggccgggg
     1741 agggcgcccc cgcggcgaat cagggacgaa tgcccctggg aagtttgggg gtcgcgtggg
     1801 tacgcttggc gccgtggagg tgacgttctt cgggacgcgt ggctcgtgcc catgctcggg
     1861 cagctgctac cagcgctatg gcggcaacac gccgagcgtg ctcgtgcgga ccgacagcga
     1921 gatcatcgtc ctcgacctcg ggagcgggct gcgggcgctc ggcgcccacg tctcctccga
     1981 ccaccccggg ggcggcccgc cggtcagggc gacggcgctc ctcacccacc tgcacttcga
     2041 ccacatcctg gggctgccgt tcttcggccc gctccggcac cacgactcgg tcttcgagat
     2101 cta
//
LOCUS       DATGJT010000045         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_212633, whole genome shotgun sequence.
ACCESSION   DATGJT010000045 DATGJT010000000
VERSION     DATGJT010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212633"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..550
                     /locus_tag="VKX24_00745"
     CDS             <1..550
                     /locus_tag="VKX24_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HLJ07035.1"
                     /translation="RLSGRDGPGAGRPAKLYRASERQLEISLPGRRYELAARLLAEAF
                     TQQGTDPAEALDQVAHRFGEDLGGRARRRLAGRPSDSRLLHTTCEVLRDQGFEPTQTG
                     GTVRLRNCPFQSIARDHPELVCGMNLSLARGLLAGLGAGGLEARLEPQPGMCCVVFSV
                     AKSGKAADQSAIGHVGDEAGQR"
     gene            complement(476..958)
                     /locus_tag="VKX24_00750"
     CDS             complement(476..958)
                     /locus_tag="VKX24_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010693158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07036.1"
                     /translation="MSFWGAMAGGFIGTLVLTTVLRAASELRLTRIDLPFLLGTVVTT
                     DRLRAKALGYLFHFFFGFFFALGYYAVFRALGRAGWWLGAALGLVHGAFTGSALVNVL
                     LPVVHPRMGTALSSIESETLLEPPGFMMLNYGRGSPLASFVAHVAYGALVGGFAALGH
                     "
     gene            complement(955..>2030)
                     /locus_tag="VKX24_00755"
     CDS             complement(955..>2030)
                     /locus_tag="VKX24_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010693159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HLJ07037.1"
                     /translation="LFSAPSGAVAAAATTSLPEGIGGVRNWDYRFCWVRDSAFILNAL
                     LQLGFSTEVDAFFWWLMQASQLTHPRLQVLYRLNGGASAIERTVAFEGYRGSTPVRVG
                     NAAADQVQLDVYGDLFETAWLYARSGRQIDRDIGRRLEAMANLVCDLWTRPDSGIWEV
                     RSQPLHFTQSKMMCWVALDRALRLAEAGQIPTRHVRRWEAEAAAVRAFVDERCWSEAQ
                     GSYVRSAGADGLDASLLLGVLFGFVEPRSHRARGTIDAVRRELGHGPFLYRYSGDDGL
                     TGGEGAFLTCSFWLVDALARSGQVGEATELMEELLGLANDVGLYAEEIDPATGEFLGN
                     FPQGLTHLALVNAAVAVGEERRP"
BASE COUNT          341 a          685 c          740 g          264 t
ORIGIN      
        1 ccgtctgtcg ggccgggacg ggcccggagc aggacggccg gcgaagctct atcgggcgtc
       61 cgagcggcag ttggagatca gccttcccgg ccgtcgctac gagctggcgg cccgcctgct
      121 ggccgaggcg ttcacccaac agggcaccga tccggccgag gccctcgatc aggtcgccca
      181 tcgcttcggg gaggatctcg gcggacgggc ccggcgccgg ctggccggcc gaccgagcga
      241 cagcaggctc ctccacacga cgtgtgaggt gctgcgcgac caagggttcg agccgacgca
      301 gaccggcgga acggtgcgac tgcgcaactg tcctttccag tcgattgcca gggaccaccc
      361 ggagctcgtc tgcggaatga acctctcgtt ggcccggggt ctgctggccg ggctgggagc
      421 cgggggcctg gaagccaggc tcgaaccgca gccgggcatg tgctgcgtgg tcttctcagt
      481 ggccaagagc ggcaaagccg ccgaccagag cgccataggc cacgtgggcg acgaagctgg
      541 ccagcggtga ccctcggccg tagttgagca tcatgaaccc cgggggttcg agcagggtct
      601 cggactcgat gctgctgagc gccgtcccca tgcggggatg gaccaccggc agcaggacgt
      661 tgaccagggc gctcccggtg aaggcgccgt ggaccaggcc gagggccgcc ccgagccacc
      721 atccagcgcg gcccagggcc cggaacacgg cgtagtaccc gagggcgaag aagaacccga
      781 agaagaaatg gaacagatag ccgagtgcct tggcccggag tcggtcggtc gtgacgaccg
      841 tcccgagcag gaagggcaga tcgatgcggg tcagccgtag ctcgctcgcc gcccgcagca
      901 cggtggtgag cacgagcgtt ccaatgaatc cgccggccat cgctccccag aagctcacgg
      961 tcggcgctcc tcgccgaccg ccaccgcggc gttgaccagg gcgaggtgcg tgagtccctg
     1021 ggggaagttc ccgaggaact cgccggttgc ggggtcgatc tcctcggcgt agagccccac
     1081 gtcgttggcc agcccgagca gttcctccat gagctcggtg gcctcaccga cctggcccga
     1141 gcgagccagg gcgtcgacga gccagaagga acaggtgagg aaggcgccct cgcctccggt
     1201 caggccgtcg tcgcccgagt agcggtacag gaagggcccg tggccgagtt cccggcggac
     1261 ggcgtcgatc gtaccccgtg cccggtggct ccggggctcg acgaagccga agaggacccc
     1321 cagcagcagg ctggcgtcga ggccatcggc gccggccgag cgcacgtagc ttccctgggc
     1381 ctccgaccag cagcgctcat cgacgaaggc ccgcacggcg gcggcttcag cctcccagcg
     1441 ccgcacatgc cgggtcggga tctggcctgc ctcggcgagc cggagggccc ggtcgagggc
     1501 cacccagcac atcatcttcg actgggtgaa gtggagcggt tggctccgca cctcccagat
     1561 acccgagtcg ggccgagtcc agaggtcgca gaccaggttg gccatggcct cgagacggcg
     1621 gccgatgtcc cggtcgatct ggcggcccga ccgggcgtag agccaggcgg tctcaaagag
     1681 gtctccgtag acgtcgagct ggacctggtc ggcggcggcg ttgccgaccc gcaccggcgt
     1741 cgaaccccgg tagccttcga aggcgacggt ccgctcgatg gcgctcgccc cgccgttcag
     1801 ccggtagagg acctgcagcc ggggatgggt gagctgggag gcctgcatca gccaccagaa
     1861 gaaggcgtca acctcggtcg agaagccgag ctggagcagg gcgttgagga tgaaggccga
     1921 gtcccgaacc cagcagaagc ggtaatccca gttccgcacc ccgccgattc cctctggaag
     1981 cgaggtcgtg gccgcggcgg ccacggcccc ggagggagcg gagaacagga
//
LOCUS       DATGJT010000046         2764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_5716,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000046 DATGJT010000000
VERSION     DATGJT010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5716"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VKX24_00760"
     CDS             <1..544
                     /locus_tag="VKX24_00760"
                     /inference="COORDINATES: protein motif:HMM:NF025109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4162 domain-containing protein"
                     /protein_id="HLJ07038.1"
                     /translation="LGIMHRPQVLFLDEPTTGLDPRARSQVWDTIRDIIAGGATVLLT
                     TQYLEEADRLADQIAVVDHGRIIAGGTPAGLKANLGATVIEIGMPGEGSALMALQALA
                     RLGVQPPVLEGTTVHLTVADSSSLLAVLRALDAEGIAPTGVTLREPSLDDVFLALTGQ
                     PAADEPAAGSQPASPVRGAV"
     gene            541..1359
                     /locus_tag="VKX24_00765"
     CDS             541..1359
                     /locus_tag="VKX24_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018499995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07039.1"
                     /translation="MTAATTPVPTGTVRTGRRQRLAWAASDAATLTWRNLLAYLRVPQ
                     LVVFSTIQPIMFVLLFRYVFGGAISVPGVPGGYVAFLMPGIFVQTVCFGAVSTGVGLA
                     EDLHKGLIERFRSLPMARSAVLAGRTLADLCRNVFVVLLMTVVGVLVGFRTGQGFLSF
                     LAGVFLVLLFSYALSWGFAVIGINARNAETAQAMAFPLLFPLTFASSAFVPVQTMPGW
                     LQAYARNQPVTVVVDACRHLMVGTPGSVPRALAWTAVLLAAFVPLAIRKYRQAT"
     gene            1433..2371
                     /locus_tag="VKX24_00770"
     CDS             1433..2371
                     /locus_tag="VKX24_00770"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HLJ07040.1"
                     /translation="MRRVDRRWVWAAAAVVLPWLWFAVRSLGFVSDLAATGLPVLYAA
                     AVVALGIAAGLRRRPEPAVGAVSFLLAGTVAVVGPWLARSGPMPVPALRIVSANVRSG
                     NPHREQAVGDALRQHGDLVMLIEAGRAKFTAPPEYPTVIRPKYSNQVILARFPARLLD
                     RPSGWPPRLRAHRLEVDAPSGRVVVYLAHLVRPHLGPQRIFKIRSQLADQRREREALL
                     RSAKAETAPVILAGDFNTPDRSRGYRRIASRFRDAMRAKRAGPTFVAPLWRAFLLRID
                     HVFVPPGWCAARPARFVLHGSDHRGIAVDVGPCPNP"
     gene            2396..>2764
                     /locus_tag="VKX24_00775"
     CDS             2396..>2764
                     /locus_tag="VKX24_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020543941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HLJ07041.1"
                     /translation="MPARNDLRNVAIVAHVDHGKTTLVDAMLWQSGVFRENQDVAERV
                     MDSTDLEREKGITILAKNTAVNFGGVKLNIVDTPGHADFGGEVERALAMVDGVLLLVD
                     AAEGPQPQTRFVLRKTLEARL"
BASE COUNT          322 a         1075 c          938 g          429 t
ORIGIN      
        1 gctcgggatc atgcaccgcc cgcaggtgct gttcctggac gagccgacca ccgggctgga
       61 tccgcgggcg cgcagccagg tgtgggacac catccgcgac atcatcgccg gcggtgccac
      121 cgtgctgctc accacgcagt acctggagga ggccgaccgg ctggccgacc agatcgccgt
      181 cgtcgaccac ggccgcatca tcgccggggg aaccccggcc gggctgaagg ccaacctcgg
      241 cgccacggtc atcgagatcg gaatgcccgg cgaagggtcg gcgctcatgg ccctccaggc
      301 tctggcccgc ctcggggtcc agccgccggt gctggagggc accaccgtgc acctgacggt
      361 ggccgattcc agttcgctcc tcgcggtgct ccgggcgctc gatgccgagg gcatcgcccc
      421 caccggcgtc acgctgcggg agccgagcct cgacgacgtc ttcctcgccc tcaccggcca
      481 gcccgcggcc gacgagccgg ccgccggctc ccagccggct tctcccgtcc gaggtgccgt
      541 atgaccgccg ccaccacccc cgtcccgacc ggcaccgtca ggaccggccg gcgccagcgt
      601 ctcgcctggg ccgcctccga cgccgccacc ctgacctggc ggaatctcct cgcctacctc
      661 cgggtgccgc agctggtcgt gttctccacc atccagccga tcatgttcgt gctgctgttc
      721 cggtacgtct tcggcggggc gatcagcgtg ccgggcgtcc ccggcggcta cgtcgccttc
      781 ctcatgcccg gcatcttcgt ccagacggtg tgcttcgggg ccgtctcgac cggcgtcggc
      841 ctggccgagg acctccacaa gggcctgatc gaacggttcc ggtcgctgcc gatggcccgc
      901 tccgcggtgc tggccgggcg gacgctggcc gacctgtgcc ggaacgtctt cgtcgtgctg
      961 ctgatgacgg tggtcggcgt cctcgtcggt ttccggacgg ggcagggctt cctctcgttc
     1021 ctcgccggcg tgttcctggt gctgctcttc agctacgccc tctcgtgggg cttcgccgtc
     1081 atcggcatca acgcccgcaa cgccgagacg gcccaggcca tggccttccc gctgctgttc
     1141 ccgctgacgt tcgcctcgtc ggccttcgtg ccggtccaga cgatgccggg ctggctccaa
     1201 gcctacgccc gcaaccagcc ggtgaccgtg gtcgtcgacg cctgccgcca cctgatggtc
     1261 ggcactcccg gctcggtgcc ccgggcgctg gcctggacgg cggtgctgct ggccgcattt
     1321 gtgccgctgg ccatccgcaa gtaccgccag gcgacctgag ggttcctgac agttctttgg
     1381 agcggcgggc cgcgatgggc gcggcccgcc gcttcgcgat gatgctcccc cgatgcggcg
     1441 ggtggaccgg cggtgggtgt gggcggcggc cgccgtcgtc ctcccctggc tctggttcgc
     1501 cgtccgcagc ctgggcttcg tttccgacct ggccgccacc ggcctccccg tcctctacgc
     1561 cgcggcggtg gtggcgctcg ggatcgccgc cgggctgcgg cgccggcccg agccggcggt
     1621 cggcgccgtc tccttcctgc tcgccggaac ggtggcggtc gtgggcccat ggctggcccg
     1681 gtccgggccg atgcccgtcc cggcgctccg gatcgtgtcg gccaacgtcc gctccgggaa
     1741 cccgcaccgg gaacaggccg tgggcgacgc cctccgccag cacggcgacc tcgtgatgct
     1801 catcgaggcc ggcagggcga agttcacggc gcctccggag tacccgacgg tgatccggcc
     1861 gaagtacagc aaccaggtca tcctggcccg cttcccggcc cggctgctcg accgtccgtc
     1921 gggctggccg ccgcggctgc gggcccaccg gctggaggtc gacgccccga gcggacgggt
     1981 ggtcgtctac ctcgcccacc tcgtgcggcc ccacctcggc ccgcagcgga tcttcaagat
     2041 ccgctcccag ctggccgacc agcgccggga acgggaggcg ctgctgcggt cggccaaggc
     2101 cgagacggcc ccggtgatcc tggccggcga cttcaacacc ccggaccgca gccggggcta
     2161 ccgccggatc gcctcgcgct ttcgcgacgc catgcgggcg aagcgggccg gcccgacctt
     2221 cgtcgccccg ctgtggcggg cgttcctgct ccgcatcgac cacgtcttcg tgccgcccgg
     2281 ctggtgcgcc gcccgccccg cccgcttcgt cctgcacggc tcggaccacc gcggcatcgc
     2341 ggtcgacgtc ggcccgtgtc cgaaccctta ggcgcaacgc ttaggctctg caaccgtgcc
     2401 cgcccggaac gatctccgca acgtcgccat cgtggcccac gtcgaccacg gcaagacgac
     2461 cctcgtcgac gccatgctct ggcagtcggg cgtcttccgg gaaaaccagg acgtcgccga
     2521 gcgcgtcatg gactcgaccg acctggaacg ggagaagggc atcacgatcc tggccaagaa
     2581 cacggcggtg aacttcggcg gcgtcaagct gaacatcgtc gacacgccgg gccacgccga
     2641 tttcggcggc gaggtggagc gggcgctggc catggtcgac ggggtcctcc tgctggtcga
     2701 cgcggccgag ggcccccagc cccagacccg cttcgtgctc cgcaagacgc tcgaggcccg
     2761 cctc
//
LOCUS       DATGJT010000047         2796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_5871,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000047 DATGJT010000000
VERSION     DATGJT010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5871"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..867)
                     /locus_tag="VKX24_00780"
     CDS             complement(112..867)
                     /locus_tag="VKX24_00780"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HLJ07042.1"
                     /translation="MPAARIAAALLAAVSALLGPGAGRVGAASTPPRVVTLSFDDGRA
                     SQAAAGPRLAARHLRGTFFIISRQVNTGDDADALSWDQIHRLARAGNEIGGHTRTHPH
                     LPTLSRADQVDEICGGRRDLFAQGFRPVSFAYPYGEYDATSEDVVRHCGYADGRGAFG
                     GVETVPPADRYAIRTPENVTTSDTPAGLEARTWAAPPGQWVNYVFHDIGGPTAYDDEY
                     RITTEDFTTFLDWVRHQRDAGRIVVRTVGQVAG"
     gene            990..1787
                     /locus_tag="VKX24_00785"
     CDS             990..1787
                     /locus_tag="VKX24_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07043.1"
                     /translation="MDPDTRFGRSHRPRRRARPAAAAAVVLALSAAGCAASGPSSSPP
                     SSAAGGRIGSEAAPPPAPSSTTATPAAAGQAYPDHTATATVFWVGEPPDHDSGYITNV
                     TSAWDDHWRDHFGGVDDPDHRAGWRPAAFVPRENPFYVALPYDDIDDAGHVKASAARL
                     PWAADRIPGQSVLKNRWVRVEHDGATAYGQWEDVGPFQSDDFDYVFGSAGPANRLNER
                     AGIDVSPALRDALHLDGEEPVSWRFVDRAYVPAGPWLSIVTASGVQH"
     gene            complement(1812..2165)
                     /locus_tag="VKX24_00790"
     CDS             complement(1812..2165)
                     /locus_tag="VKX24_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07044.1"
                     /translation="MLRRRVLHLAVGSLLLAGTQAVTAGPARADITACKTWCVWDQPR
                     FGGNMVELAGDACKDFAVKSAANNTGPESGKTAIFFFRQPGCQGPPANPYGMKSKTNS
                     PHVNAASAQLKPATR"
     gene            2319..>2796
                     /locus_tag="VKX24_00795"
     CDS             2319..>2796
                     /locus_tag="VKX24_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015748200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ07045.1"
                     /translation="MDTDEPAGGINRREFLVGASSALVGTGLLAAGWPPVAAGAAEAT
                     GGSGGSGGGAAPTWPAAAGLGTGSIQANGLEFHYVETGHGPLALCLHGFPDSPFTYRY
                     LLPALAAAGYHAVCPFMRGYQPTQIPSRYTNTKDLAADVAALRKAFGGDDKAVLIAH"
BASE COUNT          369 a         1014 c         1027 g          386 t
ORIGIN      
        1 gaggcgggcc ggcagcccga acagggcgaa gaggtcgggg tcgaggcggc ctggccgttg
       61 gccgccgtgg ccacgaggcg gagccccggc cggcggggcg aggagcgagc gtcagccggc
      121 cacctggccg acggtgcgga cgacgatgcg gccggcgtcg cgctggtggc ggacccagtc
      181 gaggaacgtg gtgaagtcct cggtggtgat ccggtactcg tcgtcgtagg cggtgggacc
      241 gccgatgtcg tggaacacgt agttcaccca ttgccccggc ggggcggccc acgttcgggc
      301 ctcgagcccg gccggcgtgt cggaggtcgt cacgttctcc ggggtccgga tggcgtagcg
      361 gtcggcgggc gggacggtct ccacgccgcc gaaggcgccc cggccgtcgg cgtagccgca
      421 gtggcggacg acgtcctcgc tggtggcgtc gtactcgccg tagggatagg cgaaggacac
      481 cggccggaag ccctgggcga agaggtcccg gcgtcctccg cagatctcgt cgacctggtc
      541 ggcccgggac agcgtcggca ggtgggggtg ggtacgggta tggccgccga tctcgttgcc
      601 ggcccgggcc agccggtgga tctggtccca cgaaagggcg tccgcgtcat cgccggtgtt
      661 cacctgccgg ctgatgatga agaacgtgcc ccggagatgg cgcgccgcca gccgcggccc
      721 ggccgcggcc tggctggccc gtccgtcgtc gaagctcagc gtgacgaccc ggggcggcgt
      781 cgaggcggcg ccgacgcggc cggcgcccgg cccgagcagc gccgagaccg ccgccagcag
      841 ggcagcggcg atccgagcgg ccggcacggc cacgatgttt ccctccccgt tcgtcgttcc
      901 cctcctcagc gttccatgcc ggacgggggt cgaagggtta gtttttcatg cggattcctc
      961 ggggaatcct gaggagacct caaaaacctg tggatccgga cacccgcttt ggccgatcgc
     1021 accgcccgcg gcggcgcgcc cgcccggccg ccgcggccgc cgtcgtgctg gccctgtccg
     1081 ccgccggctg cgccgcctcg ggtccgtctt cgtccccgcc gtcctcggcc gccggcggcc
     1141 gcatcgggag cgaggcggct ccgccgccgg cgccgtcatc gaccacggcg acgcccgctg
     1201 ctgccggcca ggcctatccc gaccacacgg ccaccgccac ggtgttctgg gtcggggaac
     1261 ccccggacca cgactccggc tacatcacca acgtcaccag cgcctgggac gaccactggc
     1321 gggaccactt cggcggcgtc gacgaccccg accaccgcgc cggctggcgg cccgccgcgt
     1381 tcgttccccg ggagaacccc ttctacgtgg cgctccccta cgacgacatc gacgacgccg
     1441 gccacgtgaa ggcgtcggcc gcccgcttgc cctgggcggc cgaccggatc cccggacagt
     1501 cggtgctcaa gaaccgctgg gtgcgggtgg agcacgacgg cgcgacggcc tacggccagt
     1561 gggaggacgt cggcccgttc cagagcgacg acttcgacta cgtattcgga agcgccggcc
     1621 cggccaaccg gttgaacgag cgggcgggca tcgacgtctc ccccgccctc cgcgacgccc
     1681 ttcacctcga cggcgaggag ccggtgtcgt ggcggttcgt ggatcgggcc tacgtgcccg
     1741 ccgggccgtg gctgtcgatc gtcaccgcca gcggcgtgca gcactgacca ccgggagagc
     1801 gaagaccgag gtcagcgcgt ggctggtttc agctgggccg acgccgcgtt gacgtggggc
     1861 gagttggtct tggacttcat gccgtaggga ttggccggcg gcccttggca acccggctgg
     1921 cggaagaaga agatcgccgt cttgccgctc tccggcccgg tgttgttggc cgccgatttc
     1981 accgcgaagt ccttgcaggc gtcgccggcg agctcgacca tgttgccgcc gaagcggggc
     2041 tggtcccaca cgcaccatgt cttgcaggcg gtgatgtcgg cccgcgccgg cccggcggtc
     2101 acggcctggg ttccggcgag cagcagcgaa ccgaccgcca ggtggagcac ccttcgccgc
     2161 agcatgccag tacctccgga gtaagacggt ccttacaacg tccttcatac tcccggcgcc
     2221 ctgccgcctc aagcaccccg ggtggaggcg ccatcgcggc ctttccgggt caggggcccg
     2281 gcggtaccgt ggccggcatt ccggagaagg gggaagccat ggacacggac gagccggccg
     2341 ggggaatcaa ccggcgcgag ttcctcgtcg gtgcgtcgag cgcactggtg ggaaccgggc
     2401 tgctggcggc gggctggccg ccggtcgccg ccggcgcggc cgaagcgacc ggcggctcgg
     2461 gagggtccgg aggcggggcg gcgccgacct ggccggcggc ggccggactg gggacgggat
     2521 ccatccaggc caacggcctg gagttccact acgtcgagac cggccacggc ccgttggccc
     2581 tgtgcctgca cggctttccc gattcaccct tcacctaccg ctatctgctg ccggccctcg
     2641 ccgccgccgg ctaccacgcc gtctgcccgt tcatgcgggg ctaccagccg acgcagatcc
     2701 cgagccggta caccaacacc aaggacctcg ccgccgacgt cgccgccctg cggaaggcct
     2761 tcggcggcga cgacaaggcc gtgctgatcg cccacg
//
LOCUS       DATGJT010000048         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_524676, whole genome shotgun sequence.
ACCESSION   DATGJT010000048 DATGJT010000000
VERSION     DATGJT010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524676"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1439
                     /locus_tag="VKX24_00800"
     CDS             <1..1439
                     /locus_tag="VKX24_00800"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ07046.1"
                     /translation="TLVWFVAGGLSALTYVLTVPTKGAIPSGLAGPELLLPALAAAVL
                     ARMESLPVAFFAAAGLGALEQLVYWSGNRPSEADVVFLLVILIGLLLQHDRMGRLSDT
                     QSSWTDTAVARPIPTELRRLPEVRGVKTALYVVLAVAAVAAPFVYGPSTTTTLSLTLV
                     WAMVGVSLVVLTGWGGHISLGQLAIVGTGAVTAANLVTKLHADLFVALLVSAIVGGVV
                     ALLVGLPALRIRGLFLAVTTLAFAVALDGYFLNPTYFHDYIPESLVRPHLWQRFPLER
                     ARAMYFLCLSFLVLFVFLARGVRRARAGRVLIASRDNRRAAEAASVPTTGVILSGFVF
                     SGMLAGVAGGLHVIVLHGVRVGSYQPIQSLEVFSMAVIGGLGSVGGVLLGVFSLRALQ
                     NVSAQYRLLITGTSLLAVLLVVPGGLGQVAFSVRDRFLKTVAKRRGLLVPSLVADYRH
                     APEHDRPDEDHPEDEVDLLAGALSGGRR"
     gene            1436..>2159
                     /locus_tag="VKX24_00805"
     CDS             1436..>2159
                     /locus_tag="VKX24_00805"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07047.1"
                     /translation="MSPLVSCRGLDVAYGPVQVLFGVDFDVEDGEIVALLGTNGAGKS
                     TLLKALSGLIDPTAGTVTFDGRDITGADAEAVTRAGVSLMPGGKGIFPTVTVDEHLRL
                     AAWTFRKDTARIEAAKAEVLELFPILAERASQPAGYLSGGEQQMLALAQAFMTKPRLL
                     LVDELSLGLAPTVVGHLLDVLRTVHAAGTTIVIVEQSVNVALTLAQRAVFMEKGEVRF
                     EGPTAELLERPDILRSVFIGGAD"
BASE COUNT          239 a          805 c          757 g          358 t
ORIGIN      
        1 cgaccctggt gtggttcgtg gccggcgggc tctcggcgct gacctacgtg ctcaccgtgc
       61 cgaccaaggg cgccatcccg tcggggctgg cggggcccga gctgctgctg ccggcgctgg
      121 cggcggcggt gctggcccgg atggagtcgt tgccggtggc cttcttcgcc gccgccgggc
      181 tcggggcgct ggagcagctc gtctactgga gcggcaaccg gccctcggag gccgacgtcg
      241 tcttcctgct cgtcatcctg atcgggctgc tcctccagca cgaccggatg ggccgcctgt
      301 ccgacacgca gagctcgtgg accgacaccg ccgtcgcccg cccgatcccg accgagctgc
      361 gccggctgcc cgaggtgcgg ggcgtcaaga cggcgctcta cgtcgtgctg gccgtggccg
      421 ccgtcgccgc ccccttcgtc tacgggccca gcacgaccac cacgctgtcg ctcacgctgg
      481 tctgggccat ggtcggcgtg tcgctggtcg tgctgaccgg ctggggtggc cacatcagcc
      541 tcggccagtt agccatcgtg gggacgggag cggtgaccgc cgccaacctc gtcaccaagc
      601 tccacgccga cctcttcgtg gcgctgctcg tctcggccat cgtcggcggc gtcgtggcgc
      661 tgctcgtcgg gctgccggcc ttgaggatca gggggctgtt cctggccgtg accacgctgg
      721 ccttcgccgt ggccctcgac ggctacttcc tcaatccgac gtacttccac gactacatcc
      781 ccgagagcct ggtgcgcccc cacctctggc agcgattccc gctggagcgg gcccgggcca
      841 tgtacttcct ctgcctcagc ttcctcgtcc tgttcgtgtt cctggcccgg ggcgtgcgcc
      901 gggcccgggc cgggcgggtc ctgatcgcct cccgcgacaa ccggcgggcc gccgaggcgg
      961 cgtcggtgcc gacgaccggc gtgatcctgt cgggcttcgt gttctccggg atgctggccg
     1021 gggtcgccgg cgggctgcac gtgatcgtcc tccacggcgt gcgggtcggc agctaccagc
     1081 cgatccagag cctggaggtg ttctccatgg cggtgatcgg cgggctgggg tcggtcggcg
     1141 gcgtcctgct cggcgtgttc tcgctgcggg cgctgcagaa cgtcagcgcc cagtaccggc
     1201 tgctgatcac cggcaccagc ctgctggccg tcctgctggt ggtgcccggc ggcctcggcc
     1261 aggtggcctt ctcggtgcgg gaccgcttcc tcaagacggt ggccaagcgc cgcgggctgc
     1321 tggtgccgag cctggtggcc gactaccgcc acgcccccga gcacgaccgc cccgacgagg
     1381 accaccccga ggacgaggtc gacctcctgg ccggggcgct ctccgggggt cgccgttgag
     1441 cccgctcgtt tcctgccgcg ggctcgacgt ggcctacggg ccggtgcagg tgcttttcgg
     1501 cgtggacttc gacgtcgagg acggcgagat cgtcgccctt ctcggcacca acggcgccgg
     1561 caagtcgacc ctgctcaagg cgctgtccgg cctcatcgac ccgacggccg ggacggtcac
     1621 gttcgacggc cgggacatca ccggcgccga tgccgaggcc gtcacccggg ccggcgtgtc
     1681 gctcatgccc ggcggcaagg ggatcttccc caccgtcacc gtcgacgagc atctccggct
     1741 ggccgcctgg acgttccgca aggacacggc ccgcatcgag gccgccaagg ccgaggtcct
     1801 cgaactgttc ccgatcctgg ccgagcgggc gtcgcagccg gccggctacc tctccggcgg
     1861 cgagcagcag atgctggccc tggcccaggc gttcatgacc aagccccggc tgctgctggt
     1921 ggacgagctg tcgctgggcc tcgcccccac ggtcgtcggc cacctcctcg acgtgctccg
     1981 caccgtccac gccgcgggca ccaccatcgt gatcgtcgag cagtccgtca acgtcgccct
     2041 cacgctggcc cagcgggcgg tgttcatgga gaagggcgag gtccgcttcg agggacccac
     2101 cgccgagctg ctcgagcggc ccgacatcct gcgctcggtg ttcatcggcg gcgcagatc
//
LOCUS       DATGJT010000049         4046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_731844, whole genome shotgun sequence.
ACCESSION   DATGJT010000049 DATGJT010000000
VERSION     DATGJT010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4046
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_731844"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VKX24_00810"
     CDS             complement(<1..407)
                     /locus_tag="VKX24_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07048.1"
                     /translation="MGPVRRKQFTRALTVLVSADLVAGVGALCIRSATAGAIGRRPAA
                     APVAAQAAPTGMLGAGHFSHRRVIGTATTAPAATAVAAAPVTTGRAPAPAGILPVPSP
                     KSTATPPAAPGPASGPPSSAPPSDPQRADGAPAP"
     gene            643..1551
                     /locus_tag="VKX24_00815"
     CDS             643..1551
                     /locus_tag="VKX24_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07049.1"
                     /translation="MASHTLKRAATVLCLSTLALTGTLVGPSLTHALADTVDTPASDQ
                     AAPNPAPAEAQSTTAPDPSPPADGQTDATQPPAAQQPDPVPFDSTQYLPDGSSGKTGT
                     IARPGKGGNGGNGGDGGNAGRCTGLLVLCVAGDGGAGGPGGGGGGGRTGGRGGSGGDA
                     GNGGNCGLVFCIQGAGGAGGAGGGGGAGSLGAGGRGGNGGNGGDGGFGTSVRLFTNGQ
                     LSPVGGILYLYGPGGAGGAGGAGGNSGKGRGANGGNGGDGGDGCPAGTPGQGGAAGQG
                     PKGPGVAGKDGQPGRDLCVLNNILPF"
     gene            2054..2761
                     /locus_tag="VKX24_00820"
     CDS             2054..2761
                     /locus_tag="VKX24_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07050.1"
                     /translation="MVIAGVGTLAAAAPAMAKSKPNHHHHHHASAHPAAAPAPVAGHN
                     ATSSSAGSTQASGQSNSNSMGSSNNQVNTAGNGGAGGAGGAGGNSGNANCLQAANGNG
                     VGAGGSGLGGSGLGGSGVGGAGVLGSGAAGSGATGTGAGGTGAAGTGTGSGSSCASGA
                     GGGGGAGGGGGNGGSVDGNNNSTTQTNSSSNNSSQTSTNTSSANTTETSTNSNNTGSG
                     NGNPAGTGNGSTAVANG"
     gene            complement(2892..3014)
                     /locus_tag="VKX24_00825"
     CDS             complement(2892..3014)
                     /locus_tag="VKX24_00825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07051.1"
                     /translation="MSFVLVVVLVLVVALVVLALVRHDAPAPPRAESHHRPPDG"
     gene            complement(3025..3450)
                     /locus_tag="VKX24_00830"
     CDS             complement(3025..3450)
                     /locus_tag="VKX24_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019737776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HLJ07052.1"
                     /translation="MLTDEQFARILEFRVALRRFGRFTEEQAGKFDMTAAQYQLLLAV
                     RGHEHPIGPTIADVARYLLIRHHSAVGLVDRTRDLGLIERRRDGDDQRLVRLVLTPLG
                     QERLNALAQAHLKELHRLAEVLGALLDSEPAGSADGVAG"
     gene            3529..>4046
                     /locus_tag="VKX24_00835"
     CDS             3529..>4046
                     /locus_tag="VKX24_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014395644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HLJ07053.1"
                     /translation="MSRAGPSGPDRLVLLSALATVLGLLGGGAAWVLIHLIAGITNVA
                     LFHHLSWTLPPFSRLHRGPNLVLVAVAGGLVVSLLALWSPEIRGHGIPEAMEAVLTKQ
                     SRIPPRAAFAKPLSAAIAIGTGGPFGAEGPIIVTGGALGSLIGQALPVTPSERKILLA
                     CGAAGGMAATFGT"
BASE COUNT          608 a         1398 c         1542 g          498 t
ORIGIN      
        1 ggagcgggcg cgccgtcggc ccgctggggg tcgctcggcg gcgccgatga ggggggaccc
       61 gatgccgggc cgggggcagc cggcggcgtc gccgtggact tcggcgatgg caccggcaga
      121 atgccggccg gggccggggc ccgaccggtg gtgacgggtg cggcggccac cgcagtcgcc
      181 gccggcgcag tggtggccgt gccgatgacc cgccgatggc tgaaatggcc ggcgcccaac
      241 atgcccgtcg gcgcagcctg agcggcgacc ggggccgccg ccggccgccg cccgatcgcc
      301 cccgccgtgg cgctccggat gcacagtgcg ccgacgccgg cgaccaggtc cgcgctcacg
      361 aggaccgtca aggcgcgggt gaactgcttg cggcggaccg ggcccacggt gcctccaacg
      421 tcggcgcatc tcggggtgac ttctccaggt tcgcccgatg tgggggcatt cctgcccgcg
      481 cttccctgtt gtgacgccca gccaagccgg ctcaaacgcc gccgcaggac tttctcgatc
      541 cagaacgaac tatcgaagga cggaaagggc catttctgtc gtcgaacgcg gtccccccgc
      601 gggtcacccc ggtccgccta caccgctcat gaaggagatt ccgtggcatc gcacaccctc
      661 aagcgggcag cgacggtctt gtgtctctcg acgctcgcgc tcaccggaac gttggtcggc
      721 ccgtcgctga cccacgccct cgctgacacc gtcgacacgc cggcctccga ccaggcggcg
      781 ccgaatccgg caccggccga ggcgcagtcg acgactgcgc ccgacccgag tcctccggct
      841 gacgggcaaa ccgatgcgac gcagccaccg gcagcgcagc aaccggaccc ggtgccgttc
      901 gacagcaccc aatacctgcc tgacggctcg agcggtaaga ccggcacgat cgcccggccg
      961 ggcaagggag gcaacggtgg aaacggcggc gacggcggaa atgccggccg ctgcaccgga
     1021 ttgctggtct tgtgcgtcgc cggagacggt ggagccggag ggccgggcgg cggaggtggc
     1081 ggcgggcgga ccggcggccg agggggttcc ggcggtgacg ccggcaacgg cgggaactgc
     1141 ggcctcgtct tttgcatcca gggcgccggg ggcgccggcg gcgccggagg tggcggcggc
     1201 gccggatcgc tgggcgccgg cggccgcggt ggcaacggcg gcaacggggg cgacggcgga
     1261 ttcggtacgt cggtccggct cttcaccaac gggcagctct cgcccgtcgg cgggatcctc
     1321 tacctgtacg gccccggcgg tgcgggcggc gccgggggcg cggggggcaa cagcggcaag
     1381 ggccgcggcg ccaacggcgg caacggcgga gacggcggcg acggttgccc cgccggaacc
     1441 ccgggccagg gcggcgcggc cggtcagggg ccgaagggcc ccggtgtcgc cggcaaggac
     1501 gggcagcccg gtcgcgacct ctgcgtgctg aacaacatcc tgcctttctg aggcaagcac
     1561 ctgccgacgg cggcggggag ccggtcttga accggttccc cgccgccttt tcgcggtatt
     1621 tgggcggggc agagacgcct aaaccgtaca aaaggcttgc agtctccgat cggaatgttt
     1681 cggcgtagat cggcgacatt cgcctaaaag ggacggcagt agattcgccc tttttcctgg
     1741 gctttgagaa ggaatcaaca tcggcaaagc gaatcagatc gagcaagacg gcggattcgg
     1801 acaaccggct ccaacgtcgt ggcggggcag gtagggaatc ttccgaacgg tagggacggt
     1861 gcgtgcgccc actctcgcgg cgacgcacga gggccgggga ctggggagcc ggccggatgc
     1921 acacgatcaa tgccctcttg gctgtggccg tcccagtacg gcgcagttca gtggtcagca
     1981 aggagaaaag gaaccggaaa tgttcacacg taaagtgaat cagggcctcg gtgcggggtt
     2041 cgctacggtg gcaatggtta tcgccggcgt cggtacgctg gccgccgcgg cgcccgcaat
     2101 ggcgaagagc aagcccaacc atcatcatca ccaccacgcc agcgcccacc cggcggcggc
     2161 ccccgccccg gtggccggcc ataacgcgac gagcagctct gccggctcga cgcaggccag
     2221 cgggcagagc aactcgaact cgatgggctc cagcaacaac caggtgaaca ctgccgggaa
     2281 cggcggcgcc ggtggtgccg gcggcgccgg cgggaacagc ggcaacgcca actgcctgca
     2341 ggccgccaac ggcaacggcg tcggcgccgg cgggtccggc ctcggcgggt ccggcctcgg
     2401 cggatcgggc gtcggcggtg cgggcgtcct cggcagcggc gccgctggaa gcggtgcgac
     2461 cggcaccggc gctggcggaa cgggtgcggc ggggaccgga accggttccg gaagctcctg
     2521 cgcctccggt gcgggcggtg gcggcggcgc cggcggcggc ggcgggaacg gtggatcggt
     2581 ggacggcaac aacaactcca cgacccagac caactccagc tccaacaact cgtcgcagac
     2641 gtcgaccaac acgtcgtcgg cgaacaccac cgagaccagc acgaacagca acaacaccgg
     2701 gagcggcaac ggcaaccccg ccgggaccgg taacggcagc actgcggtcg ccaacggctg
     2761 accgtcactg aacggcagga cagaagaagg ggggcggtct ccggaccgcc ccccttcgcc
     2821 gtgccggtcg gctcgaccga taccgagcga tcagcccgac gttgcgagcg gcgggagccc
     2881 cccggcgtcg cctagccgtc cggcgggcgg tggtgggact cggcccgggg aggggcgggg
     2941 gcgtcgtggc ggaccagcgc cagtacgacg agggcgacga ccaggacgag gacgacgacg
     3001 aggacgaagc tcatagccct cgtcctaccc ggcgacgccg tccgcagaac cggccggctc
     3061 gctgtcgagc agggcgccga ggacctcggc cagccggtgg agctccttca ggtgggcctg
     3121 ggccagggcg ttgaggcgtt cctggcccag gggcgtgagg acgaggcgca cgagccgctg
     3181 gtcgtcgccg tcgcggcggc gctcgatgag gcccaggtcc cgggtccggt cgacgagccc
     3241 gacggcgctg tggtggcgga tgaggaggta gcgggcgacg tcggcgatcg tcgggccgat
     3301 cgggtgctcg tggccccgga cggcgagcag cagctggtac tgggccgccg tcatgtcgaa
     3361 ctttccggcc tgctcctcgg tgaaccggcc gaaacggcgc agggcgaccc ggaactccag
     3421 gatccgggcg aactgctcgt cggtcagcac gaccgcgacc ctacgccagg tccggccggc
     3481 ggggcgcgtg agggctgaag cggtggccct cggggaagac gtgtcgatgt gagtcgcgcg
     3541 gggccgagcg gcccggaccg gctggtgctc ctgagcgccc tggccaccgt cctcgggctg
     3601 ctcgggggcg gggcggcctg ggtgctcatc cacctcatcg ccggcatcac caacgtggcc
     3661 ctgttccacc acctctcctg gacgctgccg ccgttctccc ggctgcaccg ggggccgaac
     3721 ctcgtgctgg tcgccgtcgc cggcggcctc gtcgtgtcgc tgctggcgtt gtggtcgccg
     3781 gagatccggg gccacgggat ccccgaggcc atggaggccg tgctgaccaa gcagagccgg
     3841 atcccgcccc gggcggcctt cgccaagccg ctctcggcgg ccatcgccat cgggacgggc
     3901 gggcccttcg gggcggaagg gccgatcatc gtgaccggcg gcgcgctcgg gtcgctgatc
     3961 ggccaggccc tcccggtgac gccctcggag cggaagatcc tcctggcctg cggggcggcc
     4021 ggcggcatgg cggcgacctt cggcac
//
LOCUS       DATGJT010000050         3870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1354327, whole genome shotgun sequence.
ACCESSION   DATGJT010000050 DATGJT010000000
VERSION     DATGJT010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3870
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1354327"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            249..1106
                     /locus_tag="VKX24_00840"
     CDS             249..1106
                     /locus_tag="VKX24_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ07054.1"
                     /translation="MDIKRVGIVGSGTMGSGIAEVACKNGYEVVLRSRSQAGADKMMS
                     GLEKSLGKQVDKGRLAETERDAALALVRGITDLEELASCDLVVESVVEDLAVKKELFA
                     TLDRICAPHAILATNTSTLPVVDMAVATSRPGQVVGIHFFNPAPMMGLVEVVRAITST
                     DETVEAALAFARSCGKDPIEVRDVAGFVVNALLFPYLNSAVRLLERGVAGQEDIDAAM
                     KAGANMPMGPFALIDLVGIDVTVSILDALHAENPDPFLQPAQHLRRMLSAGRLGRKSG
                     QGFYDYTKR"
     gene            1161..3131
                     /locus_tag="VKX24_00845"
     CDS             1161..3131
                     /locus_tag="VKX24_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein meaA"
                     /protein_id="HLJ07055.1"
                     /translation="MPARDKPWVMRTYSGHSSARASNELYRRNLAKGQTGLSVAFDLP
                     TQTGYDPDHVLARGEVGKVGVPVPHLGEMRALFEGIPIEDMNTSMTINATCAWLLGMY
                     VALARERGVDPGRLSGTTQNDIVKEYLSRGTYIFPPGPSCRLTVDTIAYTVQHVPKWN
                     PINVCSYHLQEAGATPVQEIAYALGTACAVLDAVRESGQVDADRFPEVVGRFSFFVNS
                     GIRFVEEVCKLRAMARMWDRICRERYGVTDEKLRRFRYGVQVNSLGLTEAQPENNVQR
                     IVLEMLGVTLSKSARARAVQLPCWNEALGLPRPWDQKWSLRMQQVLAYETDLLEYGDI
                     FDGSTVIEGKTASLEEAAAAELDWVLAGGGAFAMIDELKGRLVQSHAERTRRIESGEI
                     TVVGVNDFTTTEPSPLEAADEGAILVVDPAVEAQIVEALGEWRAARNAAAVADALARL
                     EDAATGTENIMEATIALAEAGGTVGEWAGTLRQVFGEFRAPTGVGGVVSPDAAAMAAV
                     RETVRGITARGGPPKLLVGKPGLDGHSNGAEQIAVAARDAGMEVVYSGIRLTPAQIAQ
                     AAADEDVDVVGLSILSGSHLELVPETVRLLREAGVSAPVVVGGIIPPSDQAKLAEIGV
                     ARVYTPKDFRLTQIMAEIAELVAAERTAREAS"
     gene            3128..3850
                     /locus_tag="VKX24_00850"
     CDS             3128..3850
                     /locus_tag="VKX24_00850"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLJ07056.1"
                     /translation="MRFRRLRPMPAGGRLVLSLVCAVAASLAAGLAFLAGAVALGSTA
                     CGTALISLALAAIQWRTMRAAPTDDGDEVTIDLRNPVPRLSTNDPVTGLVDRTFFRVT
                     LSQRVASARRHLQPLSLVVFELDGFERARPERRDQALRLLGSAIRRTLRECDTACRYG
                     DAAVACLLEDTPESGAAAAAERVRKAVTLSPSGRSFTLSAGIACYPSHALDAHDLLRR
                     SVQALAAARAAGRDRVEIAGVD"
BASE COUNT          556 a         1420 c         1363 g          531 t
ORIGIN      
        1 ccaccgcccg gccggggttc tcgaaggccg ccgccgtcgg cagcacgagc acctcgtcgg
       61 tgccggccgc ctcgagcagg gcggcgtcga acttgcggca gccgtcccgc cactcggccc
      121 cgccgacgag ggccagggtg ccggtctggt gctgatccat ggcgatcgag cctacccgtc
      181 gaatttcaac cgtcaccgca ggtagcctga ccggaacgtt gccagcggcg gaaggtgagg
      241 ggagcaccat ggacatcaag cgcgtcggga tcgttgggtc cggaacgatg ggttcgggca
      301 tcgccgaggt cgcctgcaag aacggatacg aggtcgtcct ccgcagccgt tcccaggccg
      361 gggccgacaa gatgatgtcc ggcctcgaga agtcgctggg caagcaggtc gacaagggcc
      421 gcctggccga gaccgagcgg gacgccgccc tggcgctcgt ccgggggatc accgacctcg
      481 aggaactcgc ctcgtgcgac ctcgtggtcg agtcggtggt ggaggacctg gcggtcaaga
      541 aggagctctt cgccaccctg gaccggatct gcgctcccca cgccatcctg gccaccaaca
      601 catcgacgct gccggtggtc gacatggccg tggccaccag ccgccccggc caggtggtcg
      661 gcatccactt cttcaacccg gcgccgatga tgggcctggt cgaggtggtc cgggccatca
      721 ccagcaccga cgagaccgtg gaggcggcgc tggccttcgc ccgctcctgc gggaaggacc
      781 cgatcgaggt ccgcgacgtc gccggcttcg tcgtgaacgc cctgctgttc ccctacctga
      841 actcggccgt ccggctgctc gagcgcggcg tggccggcca ggaggacatc gacgccgcca
      901 tgaaggccgg cgccaacatg ccgatgggcc ccttcgccct catcgacctc gtcggcatcg
      961 acgtgacggt gtcgatcctc gacgcccttc acgccgagaa ccccgacccc ttcctccagc
     1021 cggcccagca cctgcgccgc atgctgtcgg cgggccgcct cggccggaag agcggacagg
     1081 ggttctacga ctacaccaaa cgataagaat ctccttgccc ggaatggcac agatcgttcc
     1141 gagcaaagag aatgggtagc gtgccggccc gcgacaagcc ctgggtgatg cgaacctact
     1201 cgggccacag ttcggcccgg gccagcaacg agctctaccg ccgcaatctg gccaagggcc
     1261 agacgggcct ctcggtggcc ttcgacctgc cgacccagac cggctacgac cccgaccacg
     1321 tcctcgcccg gggcgaggtc ggcaaagtcg gcgtgcccgt cccccacctg ggcgagatgc
     1381 gggcgctgtt cgaggggatt cccatcgagg acatgaacac ctcgatgacc atcaacgcca
     1441 cctgcgcctg gctgctcggg atgtacgtgg cgctggcccg ggagcggggc gtcgaccccg
     1501 gccggctctc gggcaccacg cagaacgaca tcgtcaagga gtacctctcc cgggggacgt
     1561 acatcttccc gcccgggccg tcgtgccggc tgaccgtcga cacgatcgcc tacacggtgc
     1621 agcacgtccc gaagtggaat cccatcaacg tctgctccta ccacctccag gaggcggggg
     1681 cgacgccggt ccaggagatc gcctacgccc tggggacggc ctgcgccgtc ctcgacgccg
     1741 tgcgggaatc gggccaggtc gacgccgacc gcttccccga agtcgtcggg cggttctcgt
     1801 tcttcgtcaa ctcggggatc cgcttcgtgg aggaggtctg caagctgcgg gccatggccc
     1861 gcatgtggga ccggatctgc cgggagcgct acggcgttac cgacgaaaag ctgcggcgtt
     1921 tccgctacgg cgtgcaggtc aactcgctgg ggctgaccga ggcccagccg gagaacaacg
     1981 tccagcggat cgtgctggag atgctgggcg tcacgctgtc gaagtccgcc cgggcgaggg
     2041 ccgtccagct gccgtgctgg aacgaggccc tcggcctgcc ccggccgtgg gaccagaagt
     2101 ggtcgctgcg gatgcagcag gtgctggcct acgagaccga cctcctggag tacggcgaca
     2161 tcttcgacgg ctcgaccgtg atcgagggca agacggcgtc gctggaggag gcggccgccg
     2221 ccgagctcga ctgggtcctc gccgggggcg gcgccttcgc catgatcgac gagctgaagg
     2281 gccggctggt gcagtcccac gccgagcgga cgcggcgcat cgagagcggc gagatcaccg
     2341 tcgtcggcgt caacgacttc accaccaccg agccgtcgcc cctggaggcg gccgacgagg
     2401 gcgccatcct ggtggtcgac ccggcggtgg aggcccagat cgtcgaggcg ctcggcgagt
     2461 ggcgggcggc ccgtaacgct gccgccgtgg ccgacgccct cgcccgcctg gaggacgccg
     2521 ccaccgggac cgagaacatc atggaggcca ccatcgccct ggccgaggcc ggcgggacgg
     2581 tcggcgagtg ggccgggacc ctgcgccagg tgttcgggga gttccgggcc ccgaccggcg
     2641 tgggcggcgt cgtgtcgccc gacgccgcgg ccatggccgc cgtgcgggag accgtgcggg
     2701 gcatcaccgc ccggggcggg ccgcccaagc tgctagtcgg caagcccggc ctcgacggcc
     2761 actccaacgg cgcggagcag attgccgtgg ccgcccgcga cgccggcatg gaggtcgtct
     2821 actccggcat ccggctgacc ccggcccaga tcgcccaggc cgccgccgac gaggacgtcg
     2881 acgtcgtggg cctgtccatc ctctccggaa gtcacctgga gctggtcccc gagaccgtgc
     2941 gcctcctgcg ggaggccggc gtgtcggccc cggtggtggt gggcggcatc atccccccgt
     3001 ccgaccaggc gaagctggcc gagatcgggg tggccagggt ctacaccccg aaggacttcc
     3061 gcctcaccca gatcatggcc gagatcgcag agctcgtcgc cgccgaacgg acggcgaggg
     3121 aggcgtcgtg aggttccggc gcctgcgtcc catgccggcc ggcgggcggc tcgtgctgtc
     3181 gctggtctgc gccgtggccg ccagcctggc cgccgggctg gccttcctgg ccggcgccgt
     3241 ggccctcggg tcgacggcct gtggcaccgc cctcatctcg ctggcgctgg ccgccatcca
     3301 gtggcggacg atgcgcgccg cccccaccga cgacggcgac gaggtcacga tcgacctccg
     3361 caaccccgtc ccccgcctct cgaccaacga cccggtcacg gggctcgtcg accggacgtt
     3421 cttccgggtg acgctcagcc aacgcgtggc gtcggcccgc cggcacctcc agccgctctc
     3481 gctggtggtc ttcgagctgg acgggttcga gcgggcccgg ccggagcgcc gcgaccaggc
     3541 gctgcggctg ctcggcagcg ccatccgccg cacgctgcgg gagtgcgaca ccgcctgccg
     3601 ctacggcgac gccgcggtgg cctgcctcct cgaggacacg ccggagtccg gggccgccgc
     3661 cgccgcggag cgggtccgca aggccgtgac gctcagcccc agcggccgct cgttcacact
     3721 ctcggccggg atcgcctgct acccgagcca cgccctcgac gcccacgacc tcctgcgccg
     3781 ctcggtccag gcgctggccg ccgcccgggc cgcgggccgg gaccgggtgg agatcgccgg
     3841 cgtcgattag cccggggcgt acagcgcttc
//
LOCUS       DATGJT010000051         2490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_835994, whole genome shotgun sequence.
ACCESSION   DATGJT010000051 DATGJT010000000
VERSION     DATGJT010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_835994"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..525
                     /gene="rpsL"
                     /locus_tag="VKX24_00855"
     CDS             154..525
                     /gene="rpsL"
                     /locus_tag="VKX24_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020488528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HLJ07057.1"
                     /translation="MPTIAQLVRKGREQKTVKTKTPALKGAPQRRGVCTRVYTTTPKK
                     PNSALRKVARVRLTSGVEVTAYIPGIGHNLQEHSIVLVRGGRVKDLPGVRYKVIRGTL
                     DASGVRNRKQARSRYGAKRES"
     gene            525..995
                     /gene="rpsG"
                     /locus_tag="VKX24_00860"
     CDS             525..995
                     /gene="rpsG"
                     /locus_tag="VKX24_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012084986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HLJ07058.1"
                     /translation="MPRKGPAPRRDLMPDPIHRSVLVTQLVNKVLLRGKRSVAEKIVY
                     DALNEMERKTGSDPLATLKRALDNVKPALEVKSRRVGGATYQVPVEVRPRRSTTLAIR
                     WIIGYSRQRREKTMAERLAAELLDASNGIGTSVKRRDDMHKMAESNKAFAHYRW"
     gene            1169..>2490
                     /gene="fusA"
                     /locus_tag="VKX24_00865"
     CDS             1169..>2490
                     /gene="fusA"
                     /locus_tag="VKX24_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011365698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLJ07059.1"
                     /translation="MPASPLIREFPLARTRNIGIMAHIDAGKTTTTERILYYTGRTYK
                     IGEVHEGAAVMDWMVQEQERGITITSAATTCKWKDTWINLIDTPGHVDFTIEVERSLR
                     VLDGAVAVFDAVAGVEPQTETVWRQANKYRVPRICFINKMDRIGADFFRAVDMIRDRL
                     DAAPAVVQLPIGAEGLFRGVIDLLDMKAHVWDETSRGEEWQTLPVPAELQGDAEAWRH
                     QLVDVVSQHDEVVLEKYVGDEEITGADLRRALRLGTIANAFVPILCGTAFKNKGVQPL
                     LDAVVDYLPSPLDVPPVTGTDVKGLEELERKADDNEPFSALAFKIMSDPYVGKLTYFR
                     VYSGTLAAGSAVQNSIKDKKERVGRILQMHANHREDKQAVFAGDIVAAVGLKFTTTGD
                     TLCDPNRPIILERMEFPEPVISVAIEPKTKVDQDKLGKALFALQEEDPT"
BASE COUNT          466 a          889 c          819 g          316 t
ORIGIN      
        1 catggacggc ggccttccgg ccggtcgtcg cgcgctgccc agcgggccag cagccacggt
       61 ccgatcgggc cgccgaaccc gaggtcgacc ggggctttcc cggcagaagc cccgcaatcc
      121 ccaagctgtc tcaatcgaag aaggtcgaaa agcttgccca ccatcgcgca gttggtccgg
      181 aagggccggg aacagaagac cgtcaagacc aagacgcccg cactgaaggg cgccccccaa
      241 cgccggggag tgtgcactcg cgtctacacc accaccccga agaagccgaa ctccgccctc
      301 cgcaaggtgg cccgggtccg gctgacctcg ggggtcgagg tgacggccta catccccggc
      361 atcgggcaca acctccagga gcactcgatc gtgctcgtcc gcggcgggcg ggtgaaggac
      421 ctgcccggcg tccgctacaa ggtcatccgg ggcacgctcg acgccagcgg cgtccgcaac
      481 cgcaagcagg cccgcagccg ctacggcgcc aagagggaga gctgatgccg cgcaagggcc
      541 ccgcgccgcg ccgtgatctg atgcccgacc cgatccaccg gtcggtgctc gtgacccagc
      601 tcgtcaacaa ggtgctgttg cggggcaagc gctccgtggc cgagaagatc gtctacgacg
      661 cgctcaacga gatggagcgc aagacgggca gcgacccgct ggccacgctg aagcgggcgc
      721 tcgacaacgt caagccggcg ctcgaggtca agagccgccg ggtcggtggc gccacctacc
      781 aggtgccggt cgaggtccgc ccccgccgtt cgacgacgct ggccatccgc tggatcatcg
      841 gctattcccg ccagcgccgg gagaagacca tggccgagcg gctggccgcc gaactgctcg
      901 acgcctccaa cggcatcggc acgtcggtga agcggcgcga cgacatgcac aagatggccg
      961 agtccaacaa ggcgttcgcc cactaccgct ggtgaggaga ctgacaagcc cttgacccgt
     1021 acagaacaga gaacggaggt gggtaggtac cggtagcgcg gtccctcaga tccagggcgg
     1081 gccagtcccg cacccaccgg ccgggcgatt cgcccggcct cactttgccc cgaagaacgc
     1141 cacgaccgaa ggacgaccca accaccccat gcccgcttcg ccgctcatcc gggagttccc
     1201 cctggccagg acccgaaaca tcgggatcat ggcccacatc gacgcgggca agacgaccac
     1261 gaccgagcgg atcctctact acaccggccg gacgtacaag atcggcgagg tccacgaagg
     1321 cgcggccgtc atggactgga tggtccagga gcaggagcgc ggcatcacga tcaccagcgc
     1381 cgccacgacc tgcaagtgga aggacacctg gatcaacctg atcgacacgc cgggccatgt
     1441 cgacttcacc atcgaggtcg agcggtcgct gcgggtcctc gacggggcgg tggcggtgtt
     1501 cgacgccgtg gccggcgtcg agccccagac cgagacggtg tggcgtcagg ccaacaagta
     1561 ccgggtgccg cggatctgct tcatcaacaa gatggaccgg atcggggccg acttcttccg
     1621 ggcggtggac atgatccggg accggctcga cgccgccccg gccgtcgtcc agctgccgat
     1681 cggggccgag gggctgttcc ggggggtcat cgacctcctc gacatgaagg cccacgtctg
     1741 ggacgagacg tcgcggggcg aggagtggca gaccctgccg gtccccgccg agctgcaggg
     1801 cgacgccgag gcgtggcgcc accagctcgt cgacgtcgtc tcccagcacg acgaggtcgt
     1861 cctcgagaag tacgtcggcg acgaggagat caccggcgcc gacctccgcc gggccctgcg
     1921 cctcgggacg atcgccaacg ccttcgtccc gatcctctgc gggacggcgt tcaagaacaa
     1981 gggcgtgcag ccgctgctcg acgccgtcgt cgactacctg ccgagcccgc tcgacgtgcc
     2041 ccccgtgacc ggcaccgacg tgaagggcct cgaggagctc gagcgcaagg ccgacgacaa
     2101 cgagcccttc tcggccctgg ccttcaagat catgagcgac ccctacgtgg gcaagctcac
     2161 ctacttccgg gtctactccg gcaccctggc cgccggcagc gcggtgcaga actccatcaa
     2221 ggacaagaag gagcgggtcg gccgcatcct gcagatgcac gccaaccacc gggaggacaa
     2281 gcaggcggtc ttcgccggcg acatcgtggc cgccgtcggc ctcaagttca ccactaccgg
     2341 agacacgctc tgcgatccca accggccgat catcctcgag cggatggagt tccccgagcc
     2401 ggtgatctcg gtggccatcg aaccgaagac caaggtcgac caggacaagc tgggcaaggc
     2461 gctcttcgcc ctccaggagg aggacccgac
//
LOCUS       DATGJT010000052         4799 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_6835,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000052 DATGJT010000000
VERSION     DATGJT010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4799
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6835"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VKX24_00870"
     CDS             <1..329
                     /locus_tag="VKX24_00870"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ07060.1"
                     /translation="QKPHPPVLFATLGPSPLVIRHADGWLPLSAKDPAELPERIAGLR
                     ARAAEAGRDPSALEITVFSLERTPPERVAEYAAMGADRVVLRARLRTLNDLSTQLDAY
                     QDLIRG"
     gene            complement(663..2051)
                     /locus_tag="VKX24_00875"
     CDS             complement(663..2051)
                     /locus_tag="VKX24_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase cytochrome b
                     subunit"
                     /protein_id="HLJ07061.1"
                     /translation="MSRRRKEERVVRRTLSFFDERLSVSRFVRSSLDKVFPDHYAFLL
                     GEIALYCFIVLVLTGIFLTFFFNASSTEVVYHGAYHPLVGADVSDAYRSTLELSFSVR
                     AGLVMRQVHHWAALVFIAAIVAHLLRIFFSGAFRKPRELNWMIGVTMLILAIFNGFAG
                     YSLPDDLLSGTGLRIAFSIAESIPLIGTWIAFLLFGGEYPSERIIGRLFAIHTIIVPA
                     LLSGLIAAHLAMVWRQKHTQFPGDGHTEDTVEGPKLWPTYAMKSLGLFFAVAAVLCLL
                     GGLFQINPIWLYGPYHAYQVSSPAQPDWYMGWLEGALRLFPPWEIRAFGFEIPNPFFP
                     AVFLGGVTFLGLYAWPFIESWLTRDREVHHLLDRPRDHPFRSSVGAATLSFYSVLFFA
                     ASNDLVAKWLKVPVADVTNAFRVAVLVVPLVVFLLTHRLLRALARSGAPRFSSMPRQA
                     LRKGFRPAEPSA"
     gene            complement(2048..2968)
                     /locus_tag="VKX24_00880"
     CDS             complement(2048..2968)
                     /locus_tag="VKX24_00880"
                     /inference="COORDINATES: protein motif:HMM:NF039285.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HLJ07062.1"
                     /translation="MTEETEPREERLGQRPAPQPELQPEPTGGKPGGRAIALAFIVSL
                     LASIALGVVYALGGQPQLEGTLLFFSFGGIAAGFITWGGTLLPQGPYVQERHPLEQGP
                     LQQEETTETFEEGAEDLERRRLLIRLMTGAFVALGAALVFPVRSLGSRPGGSLFLTAW
                     RRGARAVDEHNKPVRPEDLDVGGVLTVFPEGNAGSADSQTLLIKLGSGEYRPPPGREN
                     WAVGDIVAFSKVCTHAGCPVGLYEAETHRLYCPCHQSVFAVLDGAVPTSGPATRPLPQ
                     LPLAVDADGYLVAQGDYHEPIGPGFWNRDR"
     gene            complement(2965..3831)
                     /locus_tag="VKX24_00885"
     CDS             complement(2965..3831)
                     /locus_tag="VKX24_00885"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HLJ07063.1"
                     /translation="MKGRFPATLAAGSMLLIAGVAGVACSEHDIGPYHASVPPMPASQ
                     EAGTAGDTGQVLYLRDCAWCHGAHAEGTPRAPDLRSGTKGPADVDFVLRTRRMPLRKP
                     DDPMRRGAATTAYSDRDREAIVAYLAGLGQAGPTVPYLSPNPPSLSRGAELYLANCAA
                     CHSATGIGGTLSAAQRSGAPDTGGPETFAPGITSSTRVEVAEAIRVGPGTMPVFGPKT
                     LTDDDVDAIAAYVKYLGRTADPGGLTLGHIGPVTEGAVGWLIGLGLLLGVSRWIGTRT
                     GEEPPPKGKVPE"
     gene            complement(3828..4619)
                     /locus_tag="VKX24_00890"
     CDS             complement(3828..4619)
                     /locus_tag="VKX24_00890"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HLJ07064.1"
                     /translation="MSVPAVNGASAHRSRERRRAAYFAAGLAVVAVALSPPLDGAAAR
                     RFSVHMTQHLLLILAAAPLLVAGRPGALLVEALPVEARARLGRTLHRPEWRLARRLAT
                     NPVVVLTVAVGGFWAWHLPRLYEAALHNDAVHGLEHVTFLAGGFLFWSVVLDPGPRRR
                     LGLGATCGFVFAAMLANIWLSAALAFATRPLYAVYAAHGAGAALADQQLAGVVMWVPA
                     DVVYFVTLLLLFRRLLRDVGLRRLRREAALAAEAAEAAALLGAER"
     gene            complement(4601..>4799)
                     /locus_tag="VKX24_00895"
     CDS             complement(4601..>4799)
                     /locus_tag="VKX24_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07065.1"
                     /translation="ALATSVRAWRRTSIVPAGGIATTEHRRDVAHWMALAGMANSILF
                     LLLIVTGFGPALILKRCQYPL"
BASE COUNT          723 a         1683 c         1817 g          576 t
ORIGIN      
        1 tccagaagcc gcacccgccg gtgctcttcg ccacgctcgg gccctcgccg ctggtgatcc
       61 gccacgccga cggctggctg ccgctgtcgg ccaaggaccc ggccgagctg ccggagcgga
      121 tcgccgggct gcgggcccgg gccgccgagg ccggccgcga cccgtccgcc ctcgagatca
      181 cggtgttcag cctggagcgg acgccgccgg agcgggtggc cgagtacgcc gccatggggg
      241 ccgaccgggt cgtgctccgg gcccgcctcc gcaccctcaa cgacctctcg acccagctcg
      301 acgcctacca ggacctaatc cggggctgat cgacctccgc cgccccaccc gccggcgcag
      361 atgtcgagca cttggccaca catgttgtcg ccacgtgctg gctatgtgcc ggcccgggac
      421 gcgtcgtcgc ccgatgcgga ttgcgggagc gcgggcattc ggttcggaaa tgcggagatc
      481 gggcggatgt tcgcgccgcg gtgcagggac cggcgggccg cctgccgtag agaagcgtat
      541 gaagcgcgtg ccgccggctt tcaaggagct cttgaccctc gtggtcgtgc tggccgcctt
      601 cctcgtcgtc ttctcgctgg ccttcccgac gccgcacggc tgagcgggcc ggcgccccgg
      661 cctcaggccg agggctcggc gggacggaac cccttgcgta gcgcctggcg gggcatcgac
      721 gaaaaacggg gagccccgct gcgggccagg gcccgcagca gccggtgggt caggaggaac
      781 acgacgagcg gcacgacgag gaccgccacc cggaaggcgt tggtcacgtc ggccaccggc
      841 accttgagcc acttggccac gaggtcgttg gaggcggcga agaacagcac ggagtagaac
      901 gacagcgtcg ccgccccgac cgacgagcgg aaggggtggt cccggggccg gtcgaggagg
      961 tggtggacct cgcggtcgcg ggtgagccac gactcgatga acggccaggc gtacaggccg
     1021 aggaacgtga cgccgcccag gaacaccgcc ggaaagaacg ggttggggat ctcgaagccg
     1081 aaggcccgga tctcccacgg cgggaacagc cgcagggcgc cctccagcca gcccatgtac
     1141 cagtcgggtt gggccgggga gctgacctgg taggcgtggt aggggccgta gagccagatc
     1201 gggttgatct ggaacagccc gcccagcagg cacaggacgg cggccacggc gaagaacagg
     1261 ccgagcgact tcatggcgta cgtcggccag agcttcgggc cctccacggt gtcctcggtg
     1321 tggccgtcgc cggggaactg ggtgtgcttc tggcgccaga ccatggccag atgggcggcg
     1381 atcaaaccgg acagcagggc ggggacgatg atcgtgtgga tggcgaagag ccgcccgatg
     1441 atccgctccg acgggtactc gccgccgaag agcaggaagg cgatccacgt cccgatgagc
     1501 gggatcgact cggcgatgga gaaggcgatc cttaagcccg tccccgacag gaggtcgtcg
     1561 gggagcgagt agccggcgaa cccgttgaag atggccagga tcagcatcgt gacgccgatc
     1621 atccagttga gttcccgggg cttgcggaag gcgccgctga agaagatccg gagcaggtgg
     1681 gcgacgatgg cggcgatgaa caccagcgcc gcccagtggt gcacctggcg catgacgagc
     1741 ccggcccgga ccgagaagct cagctccagc gtcgagcggt aggcgtcgga cacgtcggcc
     1801 cccaccagcg ggtggtaggc gccgtggtac acgacttcgg tcgaggaggc gttgaagaag
     1861 aacgtcagga agatgccggt gaggacgagg acgatgaagc agtagagggc gatctcgccg
     1921 agcaggaagg cgtagtggtc ggggaagacc ttgtccaggg aggagcggac gaagcgcgac
     1981 acgctgagcc gctcgtcgaa gaacgagagc gtccggcgga ccacccgttc ctctttgcga
     2041 cggcggctca ccggtctcgg ttccagaacc cggggccgat cggctcgtgg tagtcgccct
     2101 gggccacgag gtatccgtcg gcgtccacgg ccagcggcag ctgcggcagc ggccgggtgg
     2161 ccggcccgct ggtcgggacg gcgccgtcga gcacggcgaa gaccgactgg tggcaggggc
     2221 agtagagccg gtgggtctcg gcctcgtaga gccccaccgg gcacccggcg tgggtgcaga
     2281 ccttggagaa ggcgacgatg tcgccgacgg cccagttctc ccggccgggc gggggccggt
     2341 actcgcccga gcccagcttg atgagcagcg tctgggagtc ggccgatccg gcgttgccct
     2401 cggggaacac ggtgaggacg ccgcccacgt cgaggtcctc ggggcggacg ggcttgttgt
     2461 gctcgtcgac cgcccgggcc ccccgccgcc aggcggtgag gaacagcgac ccgcccggcc
     2521 gcgaccccag ggaccggacg gggaagacca gcgcggcccc gagcgccacg aaggcgccgg
     2581 tcatcaaccg gatcagcagc cggcgccgct ccaggtcctc ggcgccctcc tcgaacgtct
     2641 cggtcgtctc ctcctgctgc agggggccct gttccagcgg gtggcgctcc tggacgtagg
     2701 ggccctgggg cagcagcgtg ccgccccagg tgatgaaccc ggcggcgatc ccgccgaagg
     2761 agaagaacag cagcgttccc tccagctgcg gctgcccccc gagggcgtag accacgccga
     2821 gggcgatcga cgccagcagg ctgacgatga aggccagggc gatggctcgg ccccccggct
     2881 tcccccccgt cggctcgggc tgcagctcgg gttgcggcgc cggccgctgg cccaggcgct
     2941 cttccctcgg ctccgtctct tcggtcattc ggggaccttt cccttcggcg gcggctcctc
     3001 cccggtgcgg gtgccgatcc agcgcgacac gccgaggagc aggccgagcc cgatcagcca
     3061 gccgacggcg ccctccgtca ccggcccgat gtggccgagg gtcagccccc cggggtcggc
     3121 cgtccggccc aggtacttga cgtaggcggc gatggcgtcg acgtcgtcgt cggtcagcgt
     3181 cttcgggccg aacaccggca tcgtcccggg gcccacccgg atggcctcgg ccacctccac
     3241 ccgggtggag gacgtgatgc ccggtgcgaa cgtctccggg ccgccggtgt cgggcgcccc
     3301 gctacgctgc gccgccgaca gcgtcccgcc gatgccggtg gcggagtggc aggcggcgca
     3361 gttggccagg tacagctcgg cgccccgcga cagcgacggc gggttcggcg acaggtaggg
     3421 gacggtcggg ccggcctggc cgagaccggc caggtaggcc acgatggcct cgcggtcgcg
     3481 gtcggagtac gccgtcgtcg ccgccccccg ccgcatcggg tcgtcgggct tgcgcagcgg
     3541 catgcggcgg gtgcggagca cgaagtcgac gtcggccggg cccttggtgc cggagcggag
     3601 atcgggcgcc cggggggtgc cctcggcgtg ggcgccgtga caccaggcgc agtcccgcag
     3661 gtacagcacc tgtccggtgt cgccggcggt accggcctcc tgcgaggccg gcatcggcgg
     3721 gaccgaggcg tggtagggcc cgatgtcgtg ctcgctgcag gccacgccgg cgacgccggc
     3781 gatgagcagc atcgagccgg ccgccagcgt cgccgggaac cggcccttca ccgttcggcc
     3841 cccagcagcg ccgccgcctc ggccgcctcg gcggccaggg ccgcctcccg tcgcagccgc
     3901 cggaggccga cgtcgcgcag cagccgccgg aagagcagca gcagcgtcac gaagtacacg
     3961 acgtcggccg gcacccacat caccacgccg gccagctgct ggtcggccag ggcggcgccg
     4021 gcgccgtggg cggcgtagac ggcgtagagc ggcctggtgg caaaggccag cgccgccgac
     4081 agccagatgt tggccagcat ggcggcgaag acgaacccgc acgtggcccc gagcccgagg
     4141 cggcgcctgg gcccggggtc gaggacgacg ctccagaaca ggaacccgcc ggccaggaac
     4201 gtgacgtgct ccaggccgtg gacggcgtcg ttgtgcagcg ccgcctcgta gagccggggc
     4261 aggtgccagg cccagaaccc gccgacggcc acggtcagca ccaccaccgg gttggtggcc
     4321 aggcgccggg ccagccgcca ctccggccgg tgcagcgtcc gccccagccg ggcccgggcc
     4381 tcgaccggca gcgcctccac cagcagcgct cccgggcggc cggccacgag gagcggcgcg
     4441 gcggccagga tcagcagcag gtgctgggtc atgtggacgg agaagcgccg ggccgccgcc
     4501 ccgtcgaggg gcggtgacag cgccacggcc acgacggcga ggccggcggc gaagtacgcc
     4561 gcccgccgcc gctcccggct ccgatgggcc gacgcaccgt tcacagcggg tactgacacc
     4621 gcttgaggat cagggccggg ccgaacccgg tgacgatcaa gagcaggaac aggatgctgt
     4681 tggccatgcc cgccagcgcc atccaatggg cgacgtcgcg gcggtgctcc gtcgtggcga
     4741 ttccgcccgc cggcacgatc gacgtccgcc gccaggcccg gaccgatgtg gccagggcg
//
LOCUS       DATGJT010000053         2984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_110317, whole genome shotgun sequence.
ACCESSION   DATGJT010000053 DATGJT010000000
VERSION     DATGJT010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110317"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VKX24_00900"
     CDS             <1..639
                     /locus_tag="VKX24_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020217349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HLJ07066.1"
                     /translation="SLVTGWGSVHGFPVGVLANDKGVLYLEEAQKAAQFIQLANRSDL
                     PLLFVQNTTGYIVGTAFEQRGMVKDGSKMINAVANSGVPHVTLTIGGSYGAGNYGMGG
                     KAFDPRFLFSWPNAKTAVMGPAQMAGVLSIVSRAAAEAAGRSFDEDADAAMRRQVEDQ
                     IERESLAPFVSGRVFDDGIIDPRDTRSVLGIALSAAHSNTVAGADRFGVFRM"
     gene            641..2650
                     /locus_tag="VKX24_00905"
     CDS             641..2650
                     /locus_tag="VKX24_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013673772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HLJ07067.1"
                     /translation="MSRRRITRLLVANRGEIARRIFRTARAMGIGTVAVFTEADRGAV
                     FVGEADEGQALDRLSDRGPGAYLDAAAIVEAARRTGADAVHPGYGFLAEDPGLAWRCA
                     EAGLVFVGPSPEAIATMGSKLEAKAVAAAAGVPVLTAEEVEGYPPGKLEAAAEVLGWP
                     VLVKASAGGGGRGMRIVRRGDDLVAAVDSARREATAAFGDGTVFLEPWLESPRHVEVQ
                     VFGDATGRVVHLFERDCSLQRRHQKVIEEAPAPKLAPPLREQLHAAAVAVAEAVHYVG
                     AGTAEFLVQGDRFWFLEMNTRLQVEHPVTEEILGLDLVRMQLAAAEGRPLPVEARHCT
                     PSGHAVEARLYAEDPAAGYLPQSGVLRRFEIDPAPGLRVETGVASGSVVGSDYDPMLA
                     KIVAHAGSRSEAVRRLAAALEGMRIHGLRTNRDQLVAALRHPEFAAGEVDTGLLERHH
                     AVLTVPRGGAEAVRLHAAASALAGMAARRGAATTVLPGLPAGWRNNPSQPQAVAFAGP
                     GGERVDVRYRVERNGAVADVEVDGEALPGLRVDDLAADAVVLEVDGRRRRVAVARTGE
                     VVDCDSVLGHTELVELDPFPLPEEAAGAGSLVAPLAGVVIRVAAPAGATVAAGDLLVA
                     IESMKVEYRVTAPDAGRVADVRVVEGERVEAGTVLVVLDQAPDAA"
     gene            complement(2629..>2984)
                     /locus_tag="VKX24_00910"
     CDS             complement(2629..>2984)
                     /locus_tag="VKX24_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07068.1"
                     /translation="FVWRTDGAKEPWTESAKLDGASNIAIQDVCPGRYVEHIQATYDA
                     AVFAVIMDALTHDGGADAGRVDRSVCAQAAMPGVDMGKAMAETLEIDRDLMVLTGEHH
                     LKAEPPLAGYAASGA"
BASE COUNT          358 a         1107 c         1125 g          394 t
ORIGIN      
        1 agcctggtca ccggctgggg ctcggtgcac ggcttcccgg tcggcgtgct cgccaacgac
       61 aagggcgtgc tgtacctgga ggaggcccag aaggcggccc agttcatcca gctggccaac
      121 cggtccgacc tgccgctgct gttcgtgcag aacaccaccg gctacatcgt cggcaccgcc
      181 ttcgagcagc ggggcatggt caaggacggg tcgaagatga tcaacgcggt ggccaactcc
      241 ggcgtccccc acgtcacgct gaccatcggg ggctcctacg gcgccggcaa ctacggcatg
      301 ggcgggaagg ccttcgaccc ccgcttcctc ttctcctggc ccaacgccaa gacggcggtc
      361 atgggcccgg cccagatggc cggggtcctg tcgatcgtga gccgggcggc ggccgaggcg
      421 gccgggcgga gcttcgacga ggacgccgac gccgcgatgc gccggcaggt cgaggaccag
      481 atcgagcggg agtcgctggc gccgttcgtc agcggccggg tgttcgacga cgggatcatc
      541 gacccccgcg acacccgctc ggtgctcggg atcgccctct ccgccgccca ttccaacacc
      601 gtcgccggcg ccgatcgctt cggcgtcttc cggatgtgac atgagccgga ggaggatcac
      661 cagactgctg gtggccaacc ggggcgagat cgcccggcgg atcttccgca ccgcccgcgc
      721 catggggatc gggacggtgg cggtcttcac cgaggccgac cgcggcgccg tcttcgtcgg
      781 cgaggccgac gaggggcagg cgctcgaccg gctctccgac cgcggcccgg gcgcctacct
      841 cgacgccgcc gccatcgtgg aggcggcccg ccggaccggc gccgacgccg tccaccccgg
      901 ctacgggttc ctggccgagg accccggcct ggcctggcgc tgcgccgagg ccggcctcgt
      961 cttcgtcggc ccgtcccccg aggccatcgc caccatgggc tccaagctgg aggccaaggc
     1021 ggtggccgcc gctgccggcg tgcccgtcct cacggccgag gaggtcgagg gctacccgcc
     1081 gggcaagctg gaagcggcgg ccgaggtgct gggctggccg gtgctggtca aggcgtcggc
     1141 cggcggcggg gggcggggga tgcgcatcgt ccgccggggc gacgacctcg tggccgccgt
     1201 cgactccgcc cgccgggagg ccacggccgc cttcggcgac gggacggtgt tcctggagcc
     1261 gtggctggag tcgccccgcc acgtcgaggt ccaggtcttc ggcgacgcca ccggccgggt
     1321 ggtgcacctc ttcgagcggg actgctccct ccagcgccgc caccagaagg tcatcgagga
     1381 ggcgccggcg ccgaagctgg ccccgccgct gcgggagcag ctccacgccg ccgccgtggc
     1441 cgtggccgag gcggtccact acgtcggtgc cggcacggcc gagttcctcg tccagggcga
     1501 ccgcttctgg ttcctggaga tgaacacccg cctccaggtc gagcatccgg tgaccgagga
     1561 gatcctcggc ctcgacctcg tgcgcatgca gctggccgcc gccgaggggc ggccgctgcc
     1621 ggtcgaggcc cgccactgca cgccgtcggg ccacgccgtg gaggcccgcc tctacgccga
     1681 ggacccggcg gccgggtacc tgccgcagtc cggcgtcctg cgccgcttcg agatcgaccc
     1741 cgccccgggc ctgcgggtcg agaccggcgt ggcctcgggc tcggtcgtcg gcagcgacta
     1801 cgaccccatg ctggccaaga tcgtggccca cgccggcagc cgctcggagg ccgtccgccg
     1861 gctggcggcg gcgctggagg gcatgcggat ccacggcctg cgcacgaacc gcgaccagct
     1921 ggtcgccgcc ctgcgccatc cggagttcgc cgccggcgag gtcgacaccg ggctcctcga
     1981 gcgccaccac gccgtcctca ccgtcccccg gggcggcgcc gaggcggtgc ggctccacgc
     2041 cgccgcctcc gccctggccg ggatggcggc ccggcggggg gcggcgacga ccgtgctccc
     2101 cgggctgccg gccggttggc gcaacaaccc gtcgcagccc caggcggtgg ccttcgccgg
     2161 gccgggcggg gagcgcgtcg acgtccgcta ccgggtggag cgcaacggtg cggtcgccga
     2221 cgtcgaggtc gacggagaag cactgccggg gttgcgggtc gacgacctcg ccgccgacgc
     2281 cgtcgttctc gaggtggacg ggcgccgccg ccgcgtcgcc gtcgcccgca ccggcgaggt
     2341 cgtggactgc gacagcgtcc tcggccacac cgagctcgtc gagctcgacc ccttcccgct
     2401 gcccgaagag gcggccgggg cggggtcact ggtcgccccc ctggccggcg tcgtcatccg
     2461 ggtggcggcc ccggccggcg ccacggtggc ggccggcgac ctgctggtgg ccatcgagtc
     2521 gatgaaggtg gagtaccggg tgacagcccc ggacgccggc cgggtggccg acgtccgggt
     2581 ggtcgagggc gaacgggtgg aagcggggac ggtcctggtg gtcctggatc aggcacccga
     2641 cgcggcgtag ccggccagcg gcggttccgc cttcaggtgg tgctccccgg tgagcaccat
     2701 caggtcgcgg tcgatctcga gggtctcggc catcgccttg cccatgtcga cgcccggcat
     2761 ggccgcctgg gcgcatacgg accggtcgac gcggccggcg tcggcgccgc cgtcgtgggt
     2821 cagcgcatcc atgatgacgg cgaagacggc ggcgtcgtag gtggcctgga tgtgctccac
     2881 gtagcggccg gggcagacgt cctggatggc gatgttcgag gcgccgtcga gcttggcgct
     2941 ctccgtccac ggttccttcg ccccgtcggt gcgccagacg aact
//
LOCUS       DATGJT010000054         2000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_629150, whole genome shotgun sequence.
ACCESSION   DATGJT010000054 DATGJT010000000
VERSION     DATGJT010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629150"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..632
                     /gene="folE"
                     /locus_tag="VKX24_00915"
     CDS             54..632
                     /gene="folE"
                     /locus_tag="VKX24_00915"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013018076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HLJ07069.1"
                     /translation="MRVLRPDPAVDLDAAEIAVRDLLVALGHDPASEHLTDTPRRVAR
                     AYAELLTPRSFDLTTFPNEEGYDELVLARDIPFQSLCQHHLLPFHGVAHVGYIPNGRI
                     LGLSKLARVVDLFARGLQVQERLTCQVAGWLEERLEPKGVGVVLEAEHLCMSLRGVKA
                     AGSRTVTSALRGLVRNDPRTRTEFFGLTGRAG"
     gene            629..1453
                     /locus_tag="VKX24_00920"
     CDS             629..1453
                     /locus_tag="VKX24_00920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ07070.1"
                     /translation="MIHAALPARRRAGFDHRQFSLRHLAAAKDGQRVAVCIPAHNEEA
                     TVGSVVATAAQLRDVAVVDDVVVVDDNSTDATAKAAAAAGARVVRRDGTPSKGAAMRR
                     AVASCDADVFVFLDADVTNLAPHFVVGLVGPLLLFPDVMLVKGAYRRSLYGRPGEGGR
                     VTELVARPLLDRWFPELAHLSQPLAGETALRRVVTDAVVRLRLRRGDRVAPRRRRPLR
                     GGGHRRGRPRRAGPPQPAAGGAPVPGRGGPRRRAAAGRRPQLTTTLACIIGCRSQT"
     gene            complement(1402..1743)
                     /locus_tag="VKX24_00925"
     CDS             complement(1402..1743)
                     /locus_tag="VKX24_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005071756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ07071.1"
                     /translation="MSGPAGRRRRAAPLLAGGIAVAAVAPSLPAARAAGTTVAIEQRA
                     FNPSPVSVHVGDTVTWRNTSDDDHNVRGGPVDSPVLHPGNTFSFTFTKAGTVDYVCDL
                     HPMMQAKVVVS"
     gene            complement(1740..>2000)
                     /locus_tag="VKX24_00930"
     CDS             complement(1740..>2000)
                     /locus_tag="VKX24_00930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-binding protein"
                     /protein_id="HLJ07072.1"
                     /translation="KTNDYVEVHTVWIEAFTAPARSGVVHIAGETPKPFFGHVEHAHL
                     QRSPGQQVSDLRDSDDYVLVHTVWAESMVQPSIDVLDGGRCQ"
BASE COUNT          242 a          726 c          739 g          293 t
ORIGIN      
        1 cccgttccga actcgtcgag atcgccgaaa gcgccgatgt cgacggccgg cgcctgcggg
       61 tgctccgccc ggaccccgcg gtggacctcg acgccgccga gatcgccgtc cgggacctgc
      121 tcgtggccct cgggcacgat ccggcctccg agcacctgac cgacacgccc cggcgggtgg
      181 cccgggccta cgccgagctg ctcacccccc gctcgttcga cctcacgacg tttcccaacg
      241 aggagggcta cgacgagctc gtcctcgccc gggacattcc gttccagtcg ctgtgccagc
      301 accacctcct gccgttccac ggcgtggccc acgtgggcta catccccaac gggcggatcc
      361 tcgggctctc caagctggcc cgggtggtgg acctcttcgc ccggggtttg caggtccagg
      421 agcggctgac gtgccaggtc gccgggtggc tggaggagcg cctggagccg aagggcgtgg
      481 gcgtcgtcct cgaggccgag cacctctgca tgtcgctgcg gggcgtcaag gcggcaggct
      541 cccggacggt gacctcggcg ctgcggggcc tcgtccgcaa cgatccccgc acccggacgg
      601 agttcttcgg cctcaccgga cgggccggtt gatccacgcc gccctgcccg cccggcggcg
      661 ggcgggcttc gaccaccgcc agttctcgct ccgccacctc gccgcggcca aggacgggca
      721 gcgggtggcg gtctgcatcc cggcccacaa cgaggaggcg acggtgggga gcgtcgtggc
      781 cacggcggcg cagctgcgcg acgtcgccgt cgtcgacgac gtggtggtcg tcgacgacaa
      841 ctcgaccgac gccacggcga aggccgcagc cgccgccgga gcccgggtgg tccgccggga
      901 cggcacgccc agcaaggggg cggccatgcg ccgggcggtc gcctcgtgcg acgccgacgt
      961 gttcgtcttc ctcgacgccg acgtgacgaa tctggcgccg cacttcgtcg tcggcctggt
     1021 cggtccgctg ctgctgttcc ccgacgtcat gctggtcaag ggggcctacc gccgttccct
     1081 ctacggccgg ccgggcgagg gcggacgggt caccgagctc gtcgcccgtc cgctgctcga
     1141 ccgctggttt cccgagctcg cccacctgtc gcagccgctg gccggcgaga cggcgctccg
     1201 ccgggtggtg accgacgccg tggttcgact ccggttacgc cgtggagatc gggttgctcc
     1261 tcgacgtcgc cgcccgcttc ggggcggcgg ccatcgccga ggtcgacctc ggcgagcggg
     1321 cccaccgcaa ccggccgctg gaggagctcc ggttccaggc cggggcggtc ctcgacgccg
     1381 tgctgcggcg ggtcgacgtc ctcagctgac gacgaccttg gcctgcatca tcgggtgcag
     1441 gtcgcagacg tagtcgaccg tgcccgcctt ggtgaacgtg aacgagaacg tgttcccggg
     1501 gtggaggacg ggcgagtcga ccgggccgcc ccggacgttg tggtcgtcgt cggaagtgtt
     1561 ccgccacgtc accgtgtcgc cgacgtggac ggagacggga ctcggattga aggcgcgctg
     1621 ctcgatggcc accgtcgtcc cggccgcccg ggcggccggc agcgacgggg cgacggcggc
     1681 gacggcgatg ccgccggcga gcagcggcgc tgcccgccgg cgccttccgg cggggccgct
     1741 cactggcagc ggcccccgtc caggacgtcg atcgacggct ggaccatgct ctcggcccag
     1801 acggtgtgga cgaggacgta gtcgtcgctg tcccggaggt cggagacctg ctggcccggc
     1861 gagcgctgca ggtgggcgtg ctccacgtga ccgaagaagg gcttcggcgt ctcgccggcg
     1921 atgtggacga cgccgctgcg ggccggagcg gtgaaggcct cgatccagac cgtgtggact
     1981 tcgacgtagt cgttggtctt
//
LOCUS       DATGJT010000055         7087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_629314, whole genome shotgun sequence.
ACCESSION   DATGJT010000055 DATGJT010000000
VERSION     DATGJT010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 7087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7087
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629314"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /locus_tag="VKX24_00935"
     CDS             <1..729
                     /locus_tag="VKX24_00935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ07073.1"
                     /translation="IFAFNGKWNQLPYVNIWPRPIQQPHPPIWIPGLGSSSTWRFAAE
                     HDYSYCMLSFFGSQVGKRIMDGFWEFNDAEGLDRNPYRAGFAQLVCVAETDAEAEKKF
                     ARHIQYFFNKCLHIPEHWWGLPGYQDFESLSRGIRGGTTMNMLEVITKFKNFSYQEFV
                     DKDIVIAGSPATVRDKLVDAVKDLRIGNLMVLQQIGSMPHELTKDSISLFCTEVLPKL
                     RDIWDDEGWENKWWPQRLRGQRLA"
     gene            758..1561
                     /locus_tag="VKX24_00940"
     CDS             758..1561
                     /locus_tag="VKX24_00940"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ07074.1"
                     /translation="MPYNEIRDVEVWDGEVRTKVLVGGDGPPLLYLHAIMGLQWDPFL
                     ESLTAHHTVYAPHLPGTVPGDPDAHKAIDDVWDLTLCYSEILDALGLGGEPVAVVGHS
                     FGGMLGAELAANEPSRVAKLVLLCPIGLWTDGRSWTNPNVLSLPELGAAAFADPTGPV
                     ATAALTLPEDPEALGEAIIGVTWAMGVAAKWWWPIPDRGLRKRIHRITADSLVIWGEQ
                     DGIISPEYAGDFARLIAKCRAEVLPNAAHVPQLERFDVVPQMVQEFLAS"
     gene            1651..1833
                     /locus_tag="VKX24_00945"
     CDS             1651..1833
                     /locus_tag="VKX24_00945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07075.1"
                     /translation="MSIGMLVLGATLLLLVPVIGALVMTAGGFGLALRLEDDLPAPGN
                     QRPARPAPPKHRQRTA"
     gene            complement(1860..1942)
                     /locus_tag="VKX24_00950"
     tRNA            complement(1860..1942)
                     /locus_tag="VKX24_00950"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1906..1908),aa:Ser,seq:tga)
     gene            complement(1967..3235)
                     /gene="serS"
                     /locus_tag="VKX24_00955"
     CDS             complement(1967..3235)
                     /gene="serS"
                     /locus_tag="VKX24_00955"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HLJ07076.1"
                     /translation="MIDVRRLRSEPDYRAGIERKRVAPGLIDEVLAADEARRGLVGRV
                     DELRARQNAASKEIGRAAPEERPAKIAAAAALKDELAALEPQLAEAEAGFNELVVRVP
                     NPAHPSVPDGGEDDYDVLRVVGDTKPAPDGGLDHAEFGERMGFVDTERAARMSGSRFA
                     YLMGGAVMLEMALIRWVLGTLVDEGFTPVVPPVLVRESMMEAAGFFPTDRSQVYEVDG
                     GELFLVGTSEVPLAGIHLGETLDGASLPQRYAGFSSCFRREAGTYGKDTRGIFRVHQF
                     DKVEMFSYAHPDRSWDEHEALLAVEESIVGGLGLPYRVIAVAAGDLGAPAAKKYDIEV
                     WLPSEGRYRELTSCSNYTDYSARRLGARMRPAEAGGTQLLHTLNGTACAVGRTLLFLF
                     EHYQDEGGALAVPDVLRPFTGFDRVEPPPG"
     gene            complement(3266..4216)
                     /gene="pheA"
                     /locus_tag="VKX24_00960"
     CDS             complement(3266..4216)
                     /gene="pheA"
                     /locus_tag="VKX24_00960"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: protein motif:HMM:NF008865.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HLJ07077.1"
                     /translation="MSSPAHPPRLRVAFLGPQGTFSEEAALSQPDLAAGELVPIRSIP
                     EVIAEVDQGRADLAVVPIENAIEGSVTATLDSLAFESSHELLIQREIVLPIDMHLCAR
                     PGTRLADVTAVVSIPHATAQCREWLSRKLPGVEVQAANSTAEAARDVAETGGPRAAIS
                     TALAAKLYGLEILAADIEDHPDNETRFVIIGAGIPARTGHDKTTIVVFQNQDRPGSLL
                     GILQEFAARAVNLTKLESRPTKQGLGNYCFFMDCEGHIEDELVADVLRNLKSKHDVRF
                     LGSYPASGSDAGARRRAAGKAWRAATGWVDDLRRKVRPPE"
     gene            4327..5019
                     /gene="larB"
                     /locus_tag="VKX24_00965"
     CDS             4327..5019
                     /gene="larB"
                     /locus_tag="VKX24_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003086310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HLJ07078.1"
                     /translation="MPFADLGFARVDHHRPLRQGFPEAVYAPGKTPEQCAAIVAELVA
                     GPTGGPVLLTRATGDQAQAALSLTPGGSYDAPARLGVWKPPPRRTGSAVVACAGTADL
                     PVAEEASAVLAALGWPPVRLTDVGVAGIHRLLAEEPVLRAADVIVVVAGMEGALASAV
                     GGLAAAPVIAVPTSAGYGASLEGVTALLAMLASCAPGVAVMGIDNGYGAAVAAGRILA
                     ALERARTGDRRP"
     gene            5297..6502
                     /gene="larC"
                     /locus_tag="VKX24_00970"
     CDS             5297..6502
                     /gene="larC"
                     /locus_tag="VKX24_00970"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HLJ07079.1"
                     /translation="MTTVAWFHCFAGIAGDMALGACLDAGAPLDEVTAILERLPVAGW
                     GLEAELVMRGGLAATKAHVKAKSDGITRTYGHIAGIIEEARLPDRVRERSQRVFRLLA
                     ETEGRLHRRPTAAVHFHEVGGIDAIVDIVGTCAALKTLGVDEVAASPVRVGTGMVRTA
                     HGLLPNPPPAVVDLLKDAPVVGLDVNVELTTPTGAALLAGLSSGYGPIPAMRLAGSGF
                     GAGTRELPTLPNLVQVAVGEATGGGVGAGAMAGEPLALLEANLDDIGGEVVAHAVDAL
                     LAAGALDAWTAHVTMKKGRPGVVLSALGHLPDAPRLRDLIGRETGTLGVRVTVVDRWP
                     FARRPDEVEVEGLPVRIKRTALRAKVEYEDAARVARRTGLPLREVVSRAEAEARRTDP
                     DQPDGGTAS"
     gene            6499..>7087
                     /locus_tag="VKX24_00975"
     CDS             6499..>7087
                     /locus_tag="VKX24_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012810582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLJ07080.1"
                     /translation="MTYEDIIYDRDDSGIVTITINRPDKLNAFRSETVDELIDAFGAA
                     WRDRGCGVVILTGAGERAFCVGGDQTARGEGGGYGPGPGKTGAKHDVGIDIEDLHTLI
                     RDIPKPVIAAVNGYAIGGGHVVHVLCDLTIAADHARFGQVGPKVGSVDPGFGTAYLAR
                     VVGQKKAREIWYLCRQYSAEEALAMGLVNAVVPRER"
BASE COUNT          974 a         2645 c         2510 g          958 t
ORIGIN      
        1 atcttcgcct tcaacggcaa gtggaaccag ctgccctacg tcaacatctg gccccgcccg
       61 atccagcagc cgcacccccc catctggatc cccgggctcg ggagcagctc gacgtggcgc
      121 ttcgccgccg agcacgacta cagctactgc atgctgtcgt tcttcggcag ccaggtcggc
      181 aagcggatca tggacggctt ctgggagttc aacgacgccg agggcctcga ccggaacccc
      241 taccgggccg gcttcgccca gctcgtgtgc gtggccgaga ccgacgccga ggcggagaag
      301 aagttcgccc gccacatcca gtacttcttc aacaagtgcc tgcacatccc cgaacactgg
      361 tggggcctgc ccggctacca ggacttcgag agcctgtccc ggggcatccg cggcggcacg
      421 acgatgaata tgctcgaggt catcaccaag ttcaagaact tctcctacca ggagttcgtc
      481 gacaaggaca tcgtcatcgc cggcagcccg gccaccgttc gggacaagct ggtcgacgcc
      541 gtgaaggacc tccgcatcgg caacctcatg gtcctgcagc agatcggctc gatgccccac
      601 gagctgacca aggacagcat cagcctgttc tgcaccgaag tcctgccgaa gctgcgtgac
      661 atctgggacg acgagggctg ggagaacaag tggtggcccc agcgcctgcg cggccagcgg
      721 ctggcgtagc ggcgatcacg gcgagaggag cgaaaccatg ccctacaacg agatccgtga
      781 cgtcgaagtc tgggacgggg aggtccgcac caaggtcctc gtcggcggcg acggcccgcc
      841 gctgctctac ctccatgcga tcatgggcct ccagtgggac ccgttcctcg agtccctcac
      901 cgcccaccac acggtctacg ccccccacct gcccgggacc gtccccgggg accccgacgc
      961 ccacaaggcc atcgacgacg tctgggacct gacgctgtgc tactccgaga tcctcgacgc
     1021 cctcggcctc ggcggcgagc ccgtcgccgt cgtcggccac tccttcggcg ggatgctcgg
     1081 ggccgagctg gccgccaacg agccgtcccg ggtggcgaag ctcgtgctgc tctgccccat
     1141 cgggctctgg acggacgggc ggtcctggac gaaccccaac gtcctcagcc tgccggagtt
     1201 gggggcggcg gccttcgccg atccgaccgg cccggtggcc accgccgccc tcaccctccc
     1261 cgaggacccg gaagctctgg gggaggccat catcggggtc acctgggcca tgggggtggc
     1321 agccaagtgg tggtggccca tccccgaccg ggggctgcgc aagcggatcc accgcatcac
     1381 cgccgacagc ctggtgatct ggggcgagca ggacggcatc atctcgccgg agtacgccgg
     1441 agacttcgcc cggctcatcg ccaagtgccg ggccgaggtg ctgcccaacg ccgcccacgt
     1501 gccgcaattg gaacgcttcg acgtcgtgcc gcaaatggtg caggagttcc tcgcgagctg
     1561 aacacggcct tccgcctccg tttgtcgctc tgaggcgccg ggtacccccg gagcacaggg
     1621 tcgatcacgg aggcggagac catggctcgg gtgagcatcg ggatgctggt gctgggagcg
     1681 acgctcctcc tgctcgtccc cgtcatcggg gcgctggtga tgaccgccgg cggtttcggc
     1741 ttggcgctgc gcctggagga cgacctcccc gcccccggca accagcgccc ggcgcggccg
     1801 gctccgccga agcaccggca gcggacggcc tgacctcacg cttcgggact ccgccgtcgc
     1861 ggagggagtg ggatttgaac ccacggggct ttcacccgag cgctttcaag gcgcttccgt
     1921 ttggccgctc cggcatccct ccgggcggga aggctaacgg gatcgcctaa cccggcgggg
     1981 gctcgacccg gtcgaacccg gtgaagggtc ggaggacgtc gggcaccgcc agcgccccgc
     2041 cctcgtcctg gtagtgctcg aacaggaaca gcagcgtccg gccgacggcg caggcggtgc
     2101 cgttgagcgt gtggagcagc tgcgtcccgc cggcctccgc cggccgcatc ctcgccccga
     2161 gccggcgggc cgagtagtcg gtgtagttgg agcacgacgt cagctcccgg tagcggccct
     2221 ccgacggcag ccacacctcg atgtcgtact tcttggccgc cggtgcgccg aggtcgccgg
     2281 ccgccacggc gatcacccgg tagggcaggc cgagcccgcc gacgatcgac tcctcgacgg
     2341 ccagcagcgc ctcgtgctcg tcccagctcc ggtccggatg ggcgtacgag aacatctcca
     2401 ccttgtcgaa ctggtggacc cggaagatgc cccgggtgtc cttgccgtag gtgccggcct
     2461 cccgccggaa gcaggacgag aacccggcgt agcgctgcgg cagtgacgcc ccgtcgagcg
     2521 tctcgccgag gtggatgccg gccagcggca cctccgaggt gccgacgagg aacagctcgc
     2581 ccccgtccac ctcgtagacc tggctgcggt cggtggggaa gaacccggcc gcctccatca
     2641 tcgactcccg caccagcacc ggcggcacga ccggggtgaa gccctcgtcg accagggtgc
     2701 ccaggaccca gcggatgagc gccatctcca gcatcaccgc cccgcccatg aggtaggcga
     2761 agcggctccc gctcatgcgg gcggcccgct cggtgtcgac gaagcccatg cgctcgccga
     2821 actcggcgtg gtcgaggccg ccgtccggcg ccggcttggt gtcgccgacc acccggagga
     2881 cgtcgtagtc gtcctccccg ccgtcgggga ccgacgggtg ggcggggttc ggcacccgga
     2941 cgaccagctc gttgaagccg gcctcggcct cggccagctg cggttcgagg gcggccagct
     3001 cgtccttcag ggcggcggcg gcggcgatct tggccgggcg ctcctcgggc gccgcccgcc
     3061 cgatctcctt ggaggctgcg ttctggcggg cccgcagctc gtcgacccgg ccgaccagcc
     3121 cccggcgggc ctcgtcggcg gccagcacct cgtcgatcag gccgggagcg acccgcttgc
     3181 gctcgatccc cgcccggtag tcgggctccg accgcagccg gcggacgtcg atcatcggct
     3241 catcctcgct tcgggctcac cgggttcact ccggcggccg caccttcctc cgcaggtcgt
     3301 cgacccagcc cgtcgccgcc cgccaggcct tcccggccgc cctccgccgg gcgccggcgt
     3361 cgctcccgga cgccgggtag gagccgagga agcgcacgtc atgcttggac ttcaggttgc
     3421 gcaggacatc ggccaccagc tcgtcctcga tgtggccctc gcagtccatg aagaagcagt
     3481 agttgccgag cccctgcttg gtcgggcggg actccagctt cgtcaggttg acggcccggg
     3541 cggcgaactc ctggaggatc ccgagcagcg atcccggccg gtcctggttc tggaagacga
     3601 cgatcgtcgt cttgtcgtgg ccggtgcggg ccgggatccc ggcgccgatg atgacgaacc
     3661 gggtctcgtt gtcggggtgg tcctcgatgt cggcggccag gatttcgagg ccgtagagct
     3721 tggccgccag ggcggtggag atggccgccc gggggccccc ggtctcggcc acgtcgcggg
     3781 ccgcctcggc ggtggagttg gccgcctgca cctcgacgcc gggcagcttg cggctgagcc
     3841 actcccggca ctgggcggtg gcgtggggga tcgacaccac ggcggtcacg tcggccagcc
     3901 gggtgcccgg ccgggcgcag aggtgcatgt cgatgggcag gacgatctcc cgctggatga
     3961 gcagctcgtg cgacgactcg aaggccagcg agtcgagcgt ggccgtcacc gacccctcga
     4021 tggcgttctc gatggggacg acggcgaggt cggcccggcc ctgatcgacc tcggcgatga
     4081 cctcggggat cgaccggatg ggcaccagct ccccggcggc cagatcgggc tgggagaggg
     4141 ccgcctcctc ggagaacgtc ccctgggggc cgagaaacgc cacccggagg cgcggcggat
     4201 gggcggggga cgacatcgca ggccatccta tgtgaaccca tggttgaccc ccggctgcac
     4261 gagctcctcg aggacgtcgc ccgcggcgcc acctcgccgg cggcggccgc cgaccggctg
     4321 cggacgctgc ccttcgccga cctcggcttc gcccgggtcg accaccaccg cccgctgcgc
     4381 caggggttcc ccgaggcggt ctacgccccg ggcaagacgc cggagcagtg cgcggccatc
     4441 gtggccgagc tcgtggccgg tccgaccggc gggcccgtcc tcctgacccg ggcgaccggg
     4501 gaccaggcgc aggccgccct gtcgctgacg cccggcgggt cgtacgacgc gcccgcccgg
     4561 ctcggggtgt ggaagccgcc cccccggcgg acgggctccg ccgtcgtggc ctgcgccggc
     4621 accgccgacc tgccggtggc cgaggaggcg tcggcggtgc tggcggccct gggctggccg
     4681 cccgtccgcc tcaccgacgt cggcgtggcg gggatccacc ggctgctggc cgaggagccc
     4741 gtcctccggg cggccgacgt catcgtcgtg gtggccggca tggagggggc gctggcgtcg
     4801 gccgtcggcg ggctggcggc ggcgccggtg atcgccgtcc cgaccagcgc cggctacggc
     4861 gcctcgctgg aaggggtcac ggccctgctg gcgatgctgg ccagctgcgc ccccggcgtt
     4921 gccgtcatgg gcatcgacaa cggctacggc gccgccgtcg ccgccggccg gatcctcgcc
     4981 gccctggaac gggcccgcac cggcgaccgc cgcccatgac ccggcgttcc tcacgaacac
     5041 ctgtcgttcc ccaggaacgc cgaatcgccg gcgcggcgcg cgacgcaccc gaccggcgtt
     5101 cctcacgaac acctgtcgtt ccccaggaac gccggacggc cggcgcggcg cccgacgcgc
     5161 ccgaccggcg ttcctcacga acacctgtcg ttccccagga acgccggacg gccggcgcgg
     5221 cgcccgacgc acccgaccgg cgttcctcac gaacacctgt cgttccccag gaacgccgaa
     5281 tggccggcgc cgcccggtga ccaccgtcgc ctggttccac tgcttcgccg gcatcgccgg
     5341 cgacatggcc ctcggcgcct gcctcgacgc cggcgccccg ctcgacgagg tcaccgccat
     5401 cctcgagcgg ctgccggtcg ccggctgggg gctggaggcg gagctggtca tgcggggcgg
     5461 gctggccgcc accaaggccc atgtgaaggc gaagtccgac ggcatcaccc gcacctacgg
     5521 ccacatcgcc gggatcatcg aggaggcccg gctccccgac cgggtgcggg agcggtcaca
     5581 gcgggtgttc cggctgctgg ctgagacgga gggccggctc caccggcgcc cgacggcggc
     5641 ggtgcacttc cacgaggtcg gcggcatcga cgccatcgtg gacatcgtcg gcacctgcgc
     5701 ggcgctgaag acgctcgggg tcgacgaggt ggcggcgtca ccggtccggg tgggcacggg
     5761 catggtccgc accgcccacg gcctgctgcc caacccgccg ccggccgtcg tcgacctgct
     5821 gaaggacgct cccgtcgtcg gcctcgacgt caacgtggag ctcaccacgc cgaccggcgc
     5881 cgccctgctg gccgggctgt cctccggcta cggcccgatc ccggccatgc gcctggccgg
     5941 gagcggcttc ggggccggca cccgggagct cccgacgctg cccaacctgg tccaggtggc
     6001 ggtgggggag gcgacgggcg gcggggtcgg cgccggcgca atggccggcg agccgctggc
     6061 cctcctcgag gccaacctcg acgacatcgg cggggaggtc gtggcccacg ccgtcgacgc
     6121 cctcctcgcc gccggcgccc tcgacgcctg gaccgcccac gtcaccatga agaagggccg
     6181 gcccggcgtc gtcctctcgg cgctgggcca cctgcccgac gccccccggc tgcgggacct
     6241 catcggccgg gagacgggca cgctcggcgt gcgggtgacg gtcgtcgacc gctggccgtt
     6301 cgcccgccgg cccgacgagg tggaggtgga agggctgccc gtccgcatca agcggacggc
     6361 gctgcgggcg aaggtcgagt acgaggacgc cgcccgcgtc gcccgccgca ccgggctccc
     6421 cctgcgggag gtcgtctccc gggccgaagc ggaggcccgc cgcaccgatc ccgatcaacc
     6481 cgatggagga acggcttcgt gacctacgaa gacatcatct acgaccgcga cgactccggc
     6541 atcgtgacga tcaccatcaa ccggccggac aagctcaacg ccttccgatc ggagacggtc
     6601 gacgagctga tcgacgcctt cggggccgcc tggcgggacc ggggctgcgg ggtcgtgatc
     6661 ctgaccggcg ccggggagcg ggccttctgc gtcgggggcg accagacggc ccggggcgag
     6721 ggcggcgggt acggccctgg acccggaaag acaggggcca agcacgacgt cggcatcgac
     6781 atcgaggatc tccacacgct gatccgcgac atcccgaagc ccgtgatcgc cgccgtcaac
     6841 ggctacgcca tcgggggcgg gcacgtcgtc cacgtgctgt gcgacctgac catcgccgcc
     6901 gaccacgccc gcttcggcca ggtcggcccg aaggtcggca gcgtcgaccc cggcttcggc
     6961 accgcctacc tggcccgggt ggtggggcag aagaaggccc gggagatctg gtacctctgc
     7021 cggcagtact cggccgagga ggcgctggcc atgggcctgg tcaacgccgt cgtccccagg
     7081 gaacggc
//
LOCUS       DATGJT010000056         2742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_836787, whole genome shotgun sequence.
ACCESSION   DATGJT010000056 DATGJT010000000
VERSION     DATGJT010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836787"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1910
                     /gene="uvrB"
                     /locus_tag="VKX24_00980"
     CDS             <1..1910
                     /gene="uvrB"
                     /locus_tag="VKX24_00980"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011719941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HLJ07081.1"
                     /translation="WTIEQVQKPTLVIAPNKSLAAQLTQEFREFFRHNRVEYFVSYYD
                     YYQPEAYLPTTDTYIEKDSSINDEIDRLRHATTSSLLVRRDVIVVASVSCIYGLGSPE
                     EYRDRTIALKVGEEHEQRQLLRRIVDLHYDRNDMNLVRGTFRARGDTVEIHPAYEESA
                     FRLEFFGDTLERIVPFDVLTGEMGDELEDIVVFAATHYVAGDETMRRAIASIEAELAE
                     RLGELQREGKLLEAQRLRVRTQHDLEMLAETGTCSGIENYSRHLDGRAPGQTPYTLLD
                     FFPKDYLTVIDESHVAVPQLHGQYAGDRSRKDVLVEHGFRLPSAVDNRPLRFDEFVAR
                     TSQTIFVSATPSPYEIGESAQVVEQVIRPTGLVDPEVVLRPTKGQIDDLMSRIEDAVA
                     RGGRVLVTTLTKKMAEDLSDYLADAGIRVQYLHSDIDTITRIEILRSLRLGEVDVLVG
                     INLLREGLDLPEVSLVAILDADKEGFLRSASSLIQTMGRAARNVEGSVVLYADTITDS
                     MREAVSVTQRRRARQIAYNAEHGIDPQSIRKAVTDILERLRGSGDGASRAKRSRAEVR
                     SRQGTRAMRARAGLLKPAGIDDLTGPPELMKVMHEVESEMRKAAAELRFEEAALLRDE
                     LAELRASAAAG"
     gene            1950..>2742
                     /locus_tag="VKX24_00985"
     CDS             1950..>2742
                     /locus_tag="VKX24_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013132244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07082.1"
                     /translation="MSDRLVIRGAREHNLQDVSLELPRDRLIVFTGLSGSGKSSLAFD
                     TIYAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAISIDQKSASRNPRSTVGTI
                     TEVYDYLRLLYARIGRPHCPNCGRPVARQTPQQIVDRVLELEEGTRFSVLAPIIRGRK
                     GEYSSLLEDLARQGFARVRVDGVPLELANRADVSLARYENHTIEVVVDRLVRRDGIRA
                     RLTESIETALELTGGTAEVLVHTGLGPVTGTAETEPAGEEGITFSQ"
BASE COUNT          439 a         1026 c          894 g          383 t
ORIGIN      
        1 catggacgat cgagcaggtg cagaagccga cgctcgtgat cgcgcccaac aagagcctcg
       61 ccgcccagct gacccaggag ttcagggagt tcttccgcca caaccgggtc gagtacttcg
      121 tctcctacta cgactactac cagcccgagg cgtacctgcc cacgaccgac acctacatcg
      181 agaaggactc ctcgatcaac gacgagatcg accggctccg ccacgccacc acctcgtcgc
      241 tcctcgtgcg ccgggacgtc atcgtggtgg cttcggtgtc ctgcatctac ggcctcggat
      301 cccccgagga gtaccgcgac cggaccatcg ccctcaaggt gggggaggag cacgagcagc
      361 gccaactgct gcgccgcatc gtcgacctcc actacgaccg caacgacatg aacctcgtgc
      421 gtggcacctt tcgggcccgg ggcgacaccg tcgagatcca cccggcctac gaggagtcgg
      481 cctttcgcct ggagttcttc ggcgacaccc tcgagcgcat cgtccccttc gacgtcctca
      541 cgggcgagat gggcgacgag ctcgaggaca tcgtggtctt cgccgccacc cactacgtcg
      601 ccggcgacga gacaatgcgg cgggccatcg cctcgatcga ggccgagctg gccgagcgtc
      661 ttggcgagct ccagcgcgag gggaagctgc tcgaagccca gcggctgcgg gtccggaccc
      721 agcacgacct cgagatgctg gccgagaccg ggacctgctc gggcatcgag aactacagcc
      781 gccacctgga cggccgggcc cccggccaga ccccctacac gctgctcgac ttcttcccga
      841 aggactacct cacggtcatc gacgagagcc acgtggccgt cccccagctc cacggccagt
      901 acgccgggga ccggtcccgc aaggacgtgc tggtggagca cgggttccgg ctgccctcgg
      961 cggtcgacaa ccggccgctg cggttcgacg agttcgtggc tcgcacctcc cagacgatct
     1021 tcgtgtcggc cacccccagc ccctacgaga tcggcgagtc cgcgcaggtc gtcgagcagg
     1081 tgatccgccc gacggggctc gtcgaccccg aggtcgtgct ccggccgacg aagggccaga
     1141 tcgacgacct catgagccgg atcgaggatg ccgtggcccg gggcgggcgc gtcctcgtca
     1201 ccaccctcac caagaagatg gccgaggacc tctccgacta cctggccgac gccggcatcc
     1261 gggtgcagta cctgcactcc gacatcgaca cgatcacgag gatcgagatc ctccgcagcc
     1321 tgcgcctcgg tgaggtcgac gtgctcgtcg ggatcaacct gctccgggag ggcctggacc
     1381 tgcccgaggt ctcgctcgtg gccatcctcg acgccgacaa ggagggcttc ctccggtccg
     1441 cctcctcgct catccagacc atgggccggg ccgcccgcaa cgtcgagggc agcgtcgtcc
     1501 tctacgccga caccatcacc gactccatgc gggaggcggt ctcggtcacc cagcgccggc
     1561 gcgcccgcca gatcgcctac aacgccgagc acgggatcga cccccagagc atccgcaagg
     1621 ccgtgaccga catcctggag cggctgcggg ggagcgggga cggggcctcg cgggccaagc
     1681 gcagccgggc cgaggtccgc tcccggcagg ggacccgggc catgcgggcc cgggccggcc
     1741 tgttgaagcc ggcggggatc gacgacctca ccgggccgcc cgagctcatg aaggtcatgc
     1801 acgaggtcga gtccgagatg cgcaaggccg ccgctgagct gcgcttcgag gaggccgccc
     1861 tcctccggga cgagctcgcc gagctgcggg cgagcgcggc ggcggggtag ccagatcggc
     1921 ctgtcagacc cctccggtat cctccgcttg tgtccgaccg tctggtcatt cgcggcgcgc
     1981 gggagcacaa ccttcaggac gtctcgctcg agctgccccg ggaccggctg atcgtcttca
     2041 ccgggctgtc cgggtcaggc aagtcctccc tcgccttcga caccatctac gccgagggcc
     2101 agcgccggta cgtcgagtcc ctctccgcct acgcccgcca gttcctcggc cagatggaca
     2161 agcccgacgt ggacttcatc gaggggctgt ccccggccat ctccatcgac cagaagtcgg
     2221 catcccggaa cccccggtcg accgtcggca ccatcaccga ggtctacgac tacctgcggc
     2281 tcctctacgc ccggatcggc cgcccccact gcccgaactg cgggcggccc gtggcccgcc
     2341 agacccccca gcagatcgtc gaccgggtcc tggagctgga ggagggcacc cggttctcgg
     2401 tgctcgcgcc catcatccgg ggccgcaagg gcgagtacag ctcgctgctc gaggacctgg
     2461 cccggcaggg gttcgcccgg gtccgggtgg acggcgtccc cctggagctg gccaaccggg
     2521 ccgacgtctc gctcgcccgc tacgagaacc acacgatcga ggtggtcgtg gaccggctcg
     2581 tccggcgaga cgggatccgg gcccggttga ccgagtcgat cgagaccgcc ctcgagctca
     2641 ccggcgggac cgccgaggtc ctggtgcaca ccggcctcgg cccggtgacg ggcacggcgg
     2701 agaccgagcc ggccggcgaa gaggggatca ccttcagcca gc
//
LOCUS       DATGJT010000057         2176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_421934, whole genome shotgun sequence.
ACCESSION   DATGJT010000057 DATGJT010000000
VERSION     DATGJT010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421934"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2176
                     /gene="pepN"
                     /locus_tag="VKX24_00990"
     CDS             <1..>2176
                     /gene="pepN"
                     /locus_tag="VKX24_00990"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HLJ07083.1"
                     /translation="PPFTFIEYLAPSVERMELNGTELPASAFDGGRIRLDGLRSQNRL
                     RVVGRSAYQHTGVGMHRFVDPVDNAVYLYTDSEPYDVHRVYPCFDQPDLKAIFELSVR
                     APAGWHVSANGPPVEVPDPATGGWWRFARTAPLSTYISAIVAGDYHVVNSRHGDVDLA
                     LLCRRSLSEYLDAGEIFEVTRQGLDFYAAAFAYPYPFGKYDQAFVPEFNAGAMENAGI
                     VTFSERHIFRSRVTEGTRESRGDTILHEMAHMWFGDLVTMRWWDDLWLNESFATFMAN
                     YALVKATRFTGAWTTFSAGWKTWAYRQDQLPTTHPIVADLPDIESVKVNFDGITYAKG
                     ASVLRQLVAWVGEEAFLAGLATYFRRHAFGNTTLNDFLAALEESSGRDLQAWSKAWLE
                     AAGVNTLRPAFVVESLPGEVGGTFASFAIHQEAPPDHPTLRPHRLAIGLYDADGERLV
                     RRRRVELDVEGKETPVADLALEKVPALVVINDDDLTYAKLRLDDASFAALASRLRDVA
                     DPLTRALCWAGAWDMTRDAELPTRNYLQLVLGNVAAESQVSVVETQLGQLGLAIHAYG
                     DPADRDASLETVAAAGWEQLQQAAASSDHQLAWARAFIGAARSERHLALVNGLLDGSV
                     VVDGLAIDTELRWQIVRALAAAGRAGEETIAAEEQRDPTDAGRRHGASARAARPTEAA
                     KAAAWQQILDPGLAFATMRAVMTGFQQADQVDLLAPYAERYFE"
BASE COUNT          322 a          803 c          736 g          315 t
ORIGIN      
        1 cccgccgttc acgttcatcg agtacctggc cccctccgtc gagcggatgg agctgaacgg
       61 caccgaactc ccggcgagcg ccttcgacgg cggccggatc cgcctcgacg gcctccggag
      121 ccagaaccga ctccgggtcg tcgggaggtc ggcctaccag cacaccgggg tcgggatgca
      181 ccgcttcgtc gacccggtcg acaacgccgt ctacctgtac accgactccg agccctacga
      241 cgtccaccgg gtctacccgt gcttcgacca gccggacctc aaggcgatct tcgagctcag
      301 cgtccgggct ccggccggct ggcatgtctc agccaatggc ccgccggtcg aggtccccga
      361 cccggcgacc ggcggctggt ggcgcttcgc ccgcaccgct ccgctctcca cctacatctc
      421 ggcgatcgtc gccggcgact accacgtcgt caacagccgc cacggcgacg tcgacctggc
      481 gctgctgtgc cggcggtcgc tttccgagta cctggacgcc ggcgagattt tcgaggtcac
      541 gaggcagggg ctcgatttct acgccgccgc cttcgcctac ccgtacccgt tcggcaagta
      601 cgaccaggcc ttcgtgccgg agttcaacgc cggggcgatg gagaacgccg gcatcgtcac
      661 cttctcggag cgccacatct tccgctcccg ggtgaccgag ggcacccgcg agtcacgggg
      721 cgacacgatc ctgcacgaga tggcccacat gtggttcggc gacctggtca ccatgcgctg
      781 gtgggacgac ctctggctca acgagagctt cgccaccttc atggcgaact atgccctggt
      841 gaaggcgacc cggttcaccg gtgcctggac cacgttctcg gccggttgga agacctgggc
      901 ctaccgccag gaccagctgc caaccaccca cccgatcgtg gccgacctgc ccgacatcga
      961 gtcggtgaag gtcaacttcg acggcatcac ctatgcgaag ggggcgtcgg tgctgcgcca
     1021 gctcgtcgcc tgggtcggtg aggaggcgtt cctggcgggc ctcgccacct acttccggcg
     1081 ccacgccttc ggcaacacga cgctgaacga tttcctcgcc gcgctcgagg agagttcggg
     1141 ccgggacctg caggcgtggt cgaaggcctg gctggaggcc gccggggtca acacgctccg
     1201 gccggccttc gtcgtcgagt cgctgcccgg ggaggtcggt ggaaccttcg catcgttcgc
     1261 catccatcag gaagcgcccc ccgatcaccc gacgctgcgc ccgcaccggc tggccatcgg
     1321 gctgtacgac gccgatggcg agcgcctcgt ccgccggcgg cgcgtcgagc tcgacgtcga
     1381 aggcaaggag acgccggtcg ccgacctggc gctggagaag gtcccggcgc tggtggtgat
     1441 caacgacgac gacctgacct acgccaagct ccgcctggac gatgcctcgt ttgccgccct
     1501 cgcctcccgg ctgcgcgacg tcgccgaccc gctgacccgg gcgctgtgct gggccggcgc
     1561 ctgggacatg acccgggacg ccgagctgcc gacccggaac tacctgcagc tggtgctcgg
     1621 caacgtggcc gccgaatccc aggtctcggt ggtcgagacg caactcggcc agctggggct
     1681 ggcgatccac gcctacggcg acccggccga ccgggacgcc tcgctggaaa cggtggcggc
     1741 ggccggctgg gagcagctgc agcaggccgc tgccagcagc gaccaccagc tggcctgggc
     1801 gagggcattc atcggtgcag cccggtcgga gcggcacctg gcgttggtaa acggcttgct
     1861 cgacggcagc gtcgtggtcg acggcctggc gatcgacacc gaactgcgct ggcagatcgt
     1921 ccgcgcgctg gccgccgccg ggcgggccgg cgaggagacg atcgccgccg aagagcagcg
     1981 ggaccccacc gacgccgggc ggcgccacgg ggccagcgcc cgggcggccc gcccgaccga
     2041 ggcggccaaa gccgcggcgt ggcagcagat cctggacccc ggcctcgcct tcgccacgat
     2101 gcgggcggtg atgaccggct tccagcaagc cgaccaggtc gacctgctgg ccccctacgc
     2161 cgagcgctat ttcgag
//
LOCUS       DATGJT010000058         2915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_629729, whole genome shotgun sequence.
ACCESSION   DATGJT010000058 DATGJT010000000
VERSION     DATGJT010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2915
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629729"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..620
                     /locus_tag="VKX24_00995"
     CDS             <1..620
                     /locus_tag="VKX24_00995"
                     /inference="COORDINATES: protein motif:HMM:NF025382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4232 domain-containing protein"
                     /protein_id="HLJ07084.1"
                     /translation="RSRRGRRWLPALLTLGLLLAACSSSPSAAPKHGHHATTTTKPKN
                     KTPRSTTSTTLGPPKQLGPCTVADLSAQEIAFSTNGPGTATTEVLVTNTTANGICTLT
                     GYPSLQLIDGSGNNLPTTLEKGGSGIPASLTVQNVTLDPRTGQATFMLEWPNMPSGSQ
                     SCPLAPKMKLGVSGFAKTLTMPAEINACGGVIESSPFQPGVLQLP"
     gene            complement(806..1342)
                     /locus_tag="VKX24_01000"
     CDS             complement(806..1342)
                     /locus_tag="VKX24_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07085.1"
                     /translation="MPPEGRSAADGGGLAPRLLRASGVLLTGALGLAACASPSASHTT
                     TTTRPAPPRATTTTTTVAPSTTTTTGPTVTAVPGSVTVQVNGASATIAFSSASLTGTV
                     GTADGAFGQGGTVYTFTVTGVTYSGAPSTTAGNGGLIASVSVGPGQGGALVTVKLSSP
                     ASHASFGEGHDVVGVQFS"
     gene            complement(1332..>2915)
                     /locus_tag="VKX24_01005"
     CDS             complement(1332..>2915)
                     /locus_tag="VKX24_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07086.1"
                     /translation="LTQIAQGPTFAADPGATFYGPNVQVYGEAPNGDLIEYVNDDAGR
                     RLWNSYDITQASGGPSISGDPTPVINGSSVWVFARDSGGDLVEFTNDGANGQLWNAYD
                     LTQGSSGPSIAGDPYPLMVGSTMHVFAASADGDLADFVDAKVGGQSWTASDLTSSAKG
                     PKITGRPSALVNGGSVDVFARAVSGALTEFSGTGGGSSWSSTTVAGPTVVGDPSSLVR
                     GSTVYVYAQATGGDLTEFWNSGSSWQSDDPSQIAGGPAIGGSPGALLFGGVSIHVYAG
                     AAQVDPSSGVGVYGLVPGAQTAQAIEDNWPILGDTGALGTQTAPYTGINVGADLMTGQ
                     DITASGRRVTWLSFWTVSGPVASGAGGAACYTSACYFSDGYGAGQYVAHTIDGYKAQG
                     VPIKPDWVILDPEGYPDNHSGLDDPTVGGTATNWLSFLTGWSQGIASVDPGLHPGFYA
                     DQYEYNTFNLASIQLPAFVAVAFPSPSDILASSANVAGFIAFGASCPAQSEEQALVSP
                     PWSGSYNTLQFTGGTYCAP"
BASE COUNT          411 a         1021 c         1093 g          390 t
ORIGIN      
        1 cccgttcccg ccgcggccgc cgctggctgc cggcactgtt gacgctcggg ctcctcctcg
       61 ccgcgtgctc gtcctcgcct tcggccgcac ccaagcacgg tcaccatgcg acgacgacca
      121 ccaagcccaa gaacaagacg cccaggtcga ccacctcgac cacgctcggg ccgcccaagc
      181 agctcggacc gtgcaccgtg gccgatctga gcgcacagga gatcgccttc tcgaccaacg
      241 ggccgggcac cgcgacaacc gaggttctgg tcacgaacac cacggccaac ggcatctgca
      301 ccctcaccgg ctaccccagc ctccagctga tcgacggcag cgggaacaac ctgccgacga
      361 cgctcgagaa gggcgggtcc gggatcccgg cctcgctcac cgtccagaac gtcaccctcg
      421 accccaggac cggccaggcc accttcatgc tcgagtggcc caacatgccg agcgggagcc
      481 agagctgccc gctcgccccc aagatgaagc tcggggtgtc cggcttcgcc aagaccctca
      541 cgatgccggc cgagatcaac gcctgcggcg gggtcatcga gtcatccccc ttccagcccg
      601 gagtgctcca gctgccctga gcgggtggct ggcccgggcg acggccgaac ccggggctcg
      661 cccggggtcg gtcccgcgcc cgccgggggc gggcttgcct cagcaggggg acaggtgccc
      721 ggacggcaag cccgccctcg ggtcggcccc ggacgtgcgg ggcggtccga tcaggcccgg
      781 cggtggccgc cccggcgcta cccgatcagg agaactgcac cccgaccacg tcgtgcccct
      841 cgccgaagct ggcgtggctg gccgggctcg agagcttgac cgtcaccagc gccccgccct
      901 ggcccggacc gacggagacc gaggcgatca gcccgccgtt gccggccgtg gtcgagggcg
      961 cccccgagta ggtcaccccg gtcacggtga aggtgtagac ggtcccgccc tggccgaagg
     1021 cgccgtcggc ggtgccgacg gtgccggtca ggctggcgct cgagaacgcg atggtcgcgc
     1081 tggccccgtt gacctggacc gtcacactgc ccggcaccgc ggtcaccgtt ggtccggtcg
     1141 tggtggtcgt cgagggcgcg acggtcgtgg tcgtggtggt ggcgcggggc ggtgcgggcc
     1201 gggtcgtcgt ggtcgtgtgg ctggccgagg gcgaggcaca ggcggcgagc ccgagcgcac
     1261 cggtcaggag gactccggag gcccgcagca ggcgaggggc gagaccgcct ccgtcggcgg
     1321 ctgagcgccc ctcagggggc acagtaggtg ccgcccgtga actgcagcgt gttgtaggag
     1381 ccgctccagg gcgggctcac gagagcctgc tcctcggact gggccgggca gctggccccg
     1441 aaggcgatga agccggcgac gttggcggag gaggccagga tgtcgctcgg gctggggaag
     1501 gcgaccgcca cgaaggccgg cagctggatg gaggccaggt tgaaggtgtt gtactcgtac
     1561 tggtcggcgt agaagccggg gtggagcccg gggtcgaccg aggcgatgcc ctgggaccac
     1621 ccggtgagga agctcagcca gttggtggcc gtccccccga cggtggggtc gtccaggccc
     1681 gagtggttgt ccgggtagcc ctcggggtcg aggatgaccc agtcgggctt gatcgggacc
     1741 ccctgggcct tgtacccgtc gatcgtgtgg gccacgtact ggccggcccc gtagccgtcg
     1801 gagaagtagc aggccgaggt gtagcaggcg gcgcccccgg ctccgctcgc caccggcccg
     1861 ctcaccgtcc agaaggacag ccaggtgacc cggcgccccg aggcggtgat gtcctgcccg
     1921 gtcatgaggt cggcgccgac gttgatcccg gtgtaggggg cggtctgggt cccgagggcc
     1981 ccggtgtccc cgaggatcgg ccagttgtcc tcgatggcct gggcggtctg ggcgcccggg
     2041 acgaggccgt agacgcccac cccggaggag gggtcgacct gggcggcccc ggcgtagacg
     2101 tggatcgaga ccccgccgaa gaggagcgcc ccggggctcc cgccgatcgc cggtcctccg
     2161 gcgatctggc tcgggtcgtc gctctgccag ctcgacccgg agttccagaa ctcggtgagg
     2221 tcgccgccgg tggcctgggc gtagacgtag acggtcgagc ctctgaccag ggacgacggg
     2281 tcgccgacca cggtcgggcc ggcgaccgtg gtcgagctcc acgacgagcc gcccccggtc
     2341 cccgagaact ccgtcagggc gcccgagacc gcccgggcga agacgtcgac cgaaccgccg
     2401 ttgaccaggg cggacggccg gccggtgatc ttcgggccct tggcggagct ggtcaggtcg
     2461 gaggcggtcc aggactggcc ccccaccttg gcgtcgacga agtcggcgag gtccccgtcc
     2521 gccgacgcgg cgaagacgtg catggtcgag ccgaccatca agggataggg gtcaccggcg
     2581 atcgaggggc cggaggaccc ctgggtcagg tcgtaggcgt tccagagctg cccgttggcg
     2641 ccgtcgttgg tgaactccac caggtcgccg cccgagtccc gggcgaacac ccacaccgag
     2701 gacccgttga tgaccggggt ggggtcgccg ctgatggagg ggccgcccga cgcctgggtg
     2761 atgtcgtagg agttccacag cctcctcccg gcgtcgtcgt tgacgtactc gatgaggtcg
     2821 ccgttcgggg cctcgccgta gacctggacg ttcgggccgt agaaggtggc cccggggtcg
     2881 gcggcgaagg tgggcccctg ggcgatctgg gtgag
//
LOCUS       DATGJT010000059         3261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_526375, whole genome shotgun sequence.
ACCESSION   DATGJT010000059 DATGJT010000000
VERSION     DATGJT010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526375"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1146
                     /locus_tag="VKX24_01010"
     CDS             <1..1146
                     /locus_tag="VKX24_01010"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HLJ07087.1"
                     /translation="GLTGVVDVDDTSLRARVRPGTFGDDLERTLADHHVTLGHWPQSV
                     AISTVGGWLACRSAGQYSTRYGKIEDMVVGLEVVDGRGRRFRTGGHPRAATGPDLTQV
                     FVGSEGTLGVITEATLRLRPRPAGSGWAAYAFARFADGLDACRRTLRRGATPAVLRLY
                     DQAESTRQFSGAHHDGDGCLLLVLDEGDPESVDWTLALVDEECRRTPGATGRDRRLVA
                     HWLEHRNDVSALGMVVQAGLVVDTVEVAASWAALPGLYDAVTAAIGAVPGTLAATGHC
                     SHAYLDGGCLYFTFAGAPGDDPAAKDRYYRAAFDAAMAATLAAGGAVSHHHGIGLLRG
                     PWLRPALGDGAFAVLCDLKAALDPAGILNPGKLGLPSPFVPDRWSWS"
     gene            1143..1616
                     /locus_tag="VKX24_01015"
     CDS             1143..1616
                     /locus_tag="VKX24_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07088.1"
                     /translation="MSRPPRSRSRSRSRVPSVEIDRRALTRGTLYGLAVIAPVSIGVE
                     VLDAVDVLSRGLVVFIPALAIMCAFVLAGSQAARAARGSPYTHGALAGLASFTAWLTL
                     RMATHLVLGERLLGKEGDTGFTVVLTVATVALLSMSGGILGGLLGVWRDDGETAA"
     gene            1613..3145
                     /locus_tag="VKX24_01020"
     CDS             1613..3145
                     /locus_tag="VKX24_01020"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HLJ07089.1"
                     /translation="MSPPGAGVLAVDVGTSGVRAAVVDRAGRIVASRYRAALPTSPMV
                     NFVEFDPVEQATAALAVAHEVLAEWSGGPVAAVGITNQRASTILWDRRSGAPVGPGVG
                     WQDLRTVGMCLALQGQGLHLAPNASATKLAFLLDLADPDRSRSAAGELAFGTVDTWLA
                     WTLSQGSVHVTDPGNAAVTGLLAADGSGWDDAVLEALRIPAAVLPAIVDSAGVVGVAG
                     ALPGAPPIGGLAGDQQASLLGQGCVAPGSAKLTLGTGGMLDVCTGPSAPKTAARGPAG
                     TIPIVAWRRAGMTTWGAEAIAITAGTAVEWIRDGLGLVADSAESEAVAASVADTGGVV
                     FVPALFGLGTPRWDYGARGGFFGMTRGTGRAEMVRAVLEGVAQRGADLLEAAEADTGL
                     SIAELRLDGGMSANGVVVAALADFTGRPVAVSPVTEATTLGAAYLAGLAVGLWADEAE
                     TATLFRPARVAEPRLSADARADARARFAAAVEGCAGWVPELSAIASEPVRRFGVHDSR
                     QV"
BASE COUNT          335 a         1211 c         1280 g          435 t
ORIGIN      
        1 ggcctcaccg gcgtcgtcga cgtcgatgac acgtcgctgc gggcccgggt ccgtcccggc
       61 accttcggcg acgacctgga gcggacgctg gccgaccacc acgtcaccct cggccactgg
      121 ccgcagtcgg tggcgatctc caccgtcggc gggtggctgg cctgccggag tgccgggcag
      181 tactcgaccc gatacgggaa gatcgaggac atggtggtcg ggctcgaggt ggtggacggg
      241 cggggccggc ggttccgcac cggcggtcat ccccgggcgg cgaccgggcc ggatctcacc
      301 caggtgttcg tcgggagcga ggggacgctg ggcgtcatca ccgaggcgac gctgcggctg
      361 cggccccggc cggcggggag cggctgggcc gcctacgcct tcgcccgctt cgccgacggg
      421 ctcgacgcct gccggcggac gctgcggcgg ggcgccacgc cggccgtcct gcggctctac
      481 gaccaggcgg agtcgacccg gcagttctcg ggcgcccacc acgacggcga cggctgcctc
      541 ctcctggtgc tcgacgaggg cgacccggag tccgtcgact ggacgctggc cctggtcgac
      601 gaggagtgcc gccgcacgcc cggcgccacc ggccgggacc ggcgcctcgt cgcgcactgg
      661 ctggagcacc gcaacgacgt gtcggcgctg gggatggtgg tgcaggccgg gctggtggtc
      721 gacaccgtcg aggtcgccgc ctcgtgggcc gccctgcccg ggctctacga cgccgtgacc
      781 gccgccatcg gcgccgtgcc gggcacgctg gccgccaccg gccactgctc ccacgcctat
      841 ctcgacggcg gatgcctcta cttcaccttc gccggcgccc ccggcgacga cccggcggcc
      901 aaggaccgct actaccgggc ggcgttcgac gccgccatgg ccgccaccct ggccgccggc
      961 ggcgccgtca gccaccacca cgggatcggg ctgctccggg ggccgtggct gcgcccggcg
     1021 ctgggcgacg gcgccttcgc cgtcctctgc gatctcaagg cggcgctcga cccggcaggc
     1081 atcctgaacc ccggcaagct cggcctgccg tccccgttcg tgcccgacag gtggtcgtgg
     1141 tcgtgagccg cccgccccgg tcccgctccc ggtcgcggtc ccgggtgccg tcggtcgaga
     1201 tcgaccggcg ggcgctcacc cggggcacgc tctacggcct ggccgtcatc gcccccgtca
     1261 gcatcggggt ggaggtgctc gacgccgtcg acgtcctctc ccgggggctc gtcgtcttca
     1321 tccccgccct ggccatcatg tgcgccttcg tgctggccgg gtcgcaggcc gcccgggccg
     1381 cccgcggttc gccctacacg cacggggcgc tggccgggct ggcgtcgttc accgcctggc
     1441 tcacgctgcg gatggcgacg cacctcgtcc tcggcgagcg cctgctcggc aaggagggcg
     1501 acacgggctt caccgtggtg ctgacggtgg ccacagtggc gctgctgtcg atgtcgggcg
     1561 ggatcctcgg cgggctgctg ggagtctggc gggacgacgg cgagacggcg gcgtgagccc
     1621 gcccggggcc ggcgtcctgg cggtggacgt cggcaccagc ggcgtacggg cggcggtggt
     1681 cgaccgcgcc gggcggatcg tcgcctcccg ctaccgggcg gcgctgccga cgtcgccgat
     1741 ggtgaacttc gtggagttcg acccggtgga gcaggccacc gcggcgctgg ccgtggccca
     1801 cgaggtgctg gccgagtgga gcggcgggcc ggtggcggcg gtgggcatca ccaaccagcg
     1861 ggcctcgacg atcctctggg accggcgcag cggcgcaccg gtcggcccgg gggtcggctg
     1921 gcaggacctc cgcaccgtcg gcatgtgcct ggcgctccag ggccaggggc tccatctcgc
     1981 ccccaacgcc tcggccacca agctggcctt cctcctcgac ctcgccgacc ccgaccggag
     2041 ccggtcggcg gccggggaac tggccttcgg cacggtcgac acctggctgg cctggaccct
     2101 ctcccagggc tccgtccacg tcaccgatcc cggcaatgcc gccgtcaccg ggctgctggc
     2161 cgcggacggg tcgggctggg acgacgccgt cctcgaggcg ctgcggatcc ctgcggcggt
     2221 acttccggcc atcgtcgact cggccggggt ggtgggggtg gccggcgcgc tgcccggggc
     2281 gccgccgatc ggggggctgg ccggcgacca gcaggcgtcg ctcctcggcc agggatgcgt
     2341 ggcgccggga tcggccaagc tgacgctcgg gacgggcggg atgctcgacg tctgcaccgg
     2401 cccgtcggcc ccgaagaccg ccgcccgggg cccggccggc acgatcccca tcgtggcctg
     2461 gcgccgggcg ggcatgacga cgtggggcgc ggaggcgatc gccatcaccg ccggcacggc
     2521 cgtggagtgg atccgcgacg gtctcggcct cgtggccgac tcggcggagt cggaggcggt
     2581 ggcggcgtcg gtggccgaca ccggcggcgt ggtcttcgtc ccggcgctgt tcggcctcgg
     2641 cacgccccgg tgggactacg gcgcccgggg cggcttcttc gggatgacga gggggacggg
     2701 ccgggcggag atggtccggg cggtgctgga aggcgtggcc cagcggggcg ccgacctcct
     2761 cgaggcggcc gaggccgaca ccgggctgtc gatcgccgag ctgcggctcg acggcggcat
     2821 gtcggccaac ggcgtcgtcg tcgccgcgct ggcggacttc accggccggc cggtggcggt
     2881 gtcgccggtg accgaggcca cgacgctcgg cgccgcctac ctggccgggc tggcggtcgg
     2941 cctgtgggcc gacgaggcgg agacggcgac gctgttccgt cccgcccggg tggccgagcc
     3001 gcggctgtcg gccgacgccc gggccgacgc ccgggcccgg ttcgccgccg cggtcgaggg
     3061 ctgcgccggg tgggtgccgg agctgtcggc gatagcttct gagcccgtcc gccggttcgg
     3121 cgttcatgac tcacgacagg tgtgagtgag gaacgccggt ccgggcggga ctaccagcgc
     3181 gtcccgtcct tcaggagccg cgtcaccgtc tcggccggac cgggacgggc caggtggtag
     3241 ccctgggccc agtcgcagcc g
//
LOCUS       DATGJT010000060         5058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1355827, whole genome shotgun sequence.
ACCESSION   DATGJT010000060 DATGJT010000000
VERSION     DATGJT010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5058
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1355827"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VKX24_01025"
     CDS             complement(<1..344)
                     /locus_tag="VKX24_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07090.1"
                     /translation="MSALAKLVRYQWDRTLAAGLVVGGLVAVIVAWALASGTVLTFEQ
                     IPYLMSGGLIGVCLVAVGGTLWLSADLRDEWRKLDRLEQAVLGTGPEIDATDAATAPV
                     TAAAPGRPVHAAA"
     gene            complement(341..1717)
                     /locus_tag="VKX24_01030"
     CDS             complement(341..1717)
                     /locus_tag="VKX24_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07091.1"
                     /translation="MALRRMGLVVVPAGLALTAAGVFIPAAHAADGFKGTFGAVASAD
                     AVRVTWIVPHAPASDTVLDAGGPSAQATLDSIGGSQAYASFPYPGENTVTAPALVAGA
                     SGGKINLPAYPFWVGSTYPVAPKSEAGSGPYSIKAQSSDTESNASASVGLASSGQAAV
                     GLARSTASTATAPEAVTSEAVTEVTAFAVGPLKIGQVLSRAKAVFSGTGTLARDADTQ
                     VTGMMIADTPVAFTAKGLVIGSSAVPADPKPVESALAQAKIGLEYMPRQDTDGGVVAP
                     TIRVTQKDDSGGSITYVLGRASAFAQGAGDAPGAAPDASTSPDTSGSGSGRSATAQPD
                     QASSSTAPPAVQAAALAPVAPEPGETGTQNVDVPTSFVVPDPQPTAAPSSAAVGSTVV
                     PARIQLASNAPGSVAAAAGPADGRRLAAGILFSAGDTSPMFVALLAGLVAALGSALLV
                     RRLGKRMR"
     gene            complement(1762..3342)
                     /locus_tag="VKX24_01035"
     CDS             complement(1762..3342)
                     /locus_tag="VKX24_01035"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ07092.1"
                     /translation="MASRTMRLVAVAGAVVLATTACGNRSSSDKLNALLNGKNQGAPA
                     PAAAPGSAAPAADTPAATGDAGASAAVPASGSAATPSAGASASAGAPGAAAGPSSRSA
                     AGTASGTPAPGQKSPGAATAAAGTKSAEPGGPAGGGAAPGAPGLPSTPAGCSGSEPPI
                     VIGSVGTMSGVVGYLFAPGAKAVSAWAAEINEKGGINCHAVKHLIGDSGGDPARYQAL
                     VRQFVEREGVIAFVFNPDSFAAQAGADYLEQKQVPVIGGGGGEMFTYDKSMQFPVFAM
                     GVPMQMNQVFQASRVWIPAGKKKIGTVSCVEAEYCPIFDKTVKEFGPKFGFDLVYQAD
                     VTITAPDYTATCLEARNNGVTAFITSLDGQTNQRLVNSCAKVGFNAPIAAASIQGTDD
                     FKDNPNMVGSLVGMNVAPWFANAPAVAEHRAIFKKHVHDAIFGPAAINGWTTAKAFEA
                     ATTAVPRTGAVTSRDVINGLNSLNGNDLGGLTYPLRFSAAQPNKKKVVCGYPVEVVAK
                     GRWDAPINQMACMPGFEP"
     gene            complement(3641..4405)
                     /locus_tag="VKX24_01040"
     CDS             complement(3641..4405)
                     /locus_tag="VKX24_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015623738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HLJ07093.1"
                     /translation="MGAIESAISKLRDLIASGELAPGDRLPPEPELAALVGVSRNTLR
                     EAVRALIQAKVLDVRRGDGTYVTSLEPHLLLSGLSFVVDLMQDRTVLELSEVRRILEP
                     AAISLAADRIDEKTMNAVRESFARMRQAETTEELVAEDMEFHRLVIKAAGNATLESLL
                     EALVTRTTKGRVWRAISGGGTKAWTLAQHQVIVDALAARDADLAQAASTLLVAASDNW
                     LRHLLGDTTPPPATPVPAELGLEKGSRRKAKRAPTA"
     gene            4551..4997
                     /locus_tag="VKX24_01045"
     CDS             4551..4997
                     /locus_tag="VKX24_01045"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLJ07094.1"
                     /translation="MTLTPDDVRSLLTAFDASVWQEMTLTSGPDRLHVSRRMDGPPPV
                     AAAPSGASGHRVNPGVVSSAAAEITVRSPSIGVFRRAGHPGAPDGAGLGSVVGPGEAI
                     GFVDVMGRVIPVEAEVSGTVSAVLADDGATVEYGEAVARLVPDRGD"
BASE COUNT          671 a         1781 c         1868 g          738 t
ORIGIN      
        1 gcggcggcgt ggaccggcct gccgggcgcc gccgccgtga cgggggccgt ggcggcgtcc
       61 gtggcgtcga tctcgggccc ggtgccgagc accgcctgct ccagccggtc gagcttgcgc
      121 cactcgtccc gcaggtcggc cgagagccac agcgtccccc cgaccgccac caggcagacg
      181 ccgatcagtc cgcccgacat gaggtagggg atctgctcga aggtgaggac ggtgccgctg
      241 gccagcgccc aggcgacgat cacggccacg agaccgccca ccaccaagcc ggcggccagg
      301 gtacggtccc actggtaccg aacgagcttg gccagcgcac tcatcgcatc ctctttccca
      361 accggcggac caggagagcg gaaccgaggg cggcgacgag cccggccagg agggcgacga
      421 acatcggact ggtgtcgccg gcgctgaaca ggattccggc cgccagccgc cggccgtcgg
      481 ccggaccggc ggcggccgcc acggagccgg gcgcgttcga cgccagctgg atccgggccg
      541 ggacgaccgt gctccccacg gcggccgagc tcggcgcggc ggtcggctgc ggatcaggaa
      601 ccacgaacga cgtcgggacg tcgacattct gagtgccggt ctcaccgggc tcgggtgcga
      661 ccggggccag ggccgccgcc tggacggccg gtggagcggt ggagctggac gcctggtcgg
      721 gctgggccgt cgccgaccgg ccggacccgg atcccgacgt atcgggcgag gtcgaagcgt
      781 cgggggcggc cccgggcgca tccccggccc cctgggcgaa cgccgaagcc cgtccgagca
      841 cgtaggtgat cgagccgccg gagtcgtcct tctgcgtcac ccggatcgtc ggggcgacga
      901 cgccgccgtc ggtgtcctgg cggggcatgt actccagccc gatcttggcc tgggccagtg
      961 cgctctcgac cggcttggga tcagccggca cggccgacga gccgatcacc agccccttgg
     1021 cggtgaaggc caccggcgtg tcggcgatca tcatccccgt gacctgggtg tcggcgtcac
     1081 gggccagagt gccggttccc gagaacaccg ccttggccct cgagagcacc tggccgatct
     1141 tgagcgggcc gacggcgaaa gccgtgacct cggtgaccgc ctccgacgtg accgcctccg
     1201 gcgcggtggc ggtcgacgcc gtggagcggg cgaggcccac cgccgcctgg ccgctggagg
     1261 ccaggccgac gctggccgac gcgttcgatt cggtgtcgct gctctgcgcc ttgatcgagt
     1321 acggcccgct gccggcttcc gacttgggcg ccaccgggta ggtcgacccg acccagaacg
     1381 ggtaggccgg caggttgatc ttgccccccg aggcgccggc gacgagggcc ggagccgtca
     1441 cggtgttctc accggggtag gggaacgagg cgtaggcctg gctcccgccg atgctgtcca
     1501 gcgtcgcctg ggccgacgga ccgccggcgt cgaggacggt gtcgctggcc ggggcgtggg
     1561 ggacgatcca cgtgacgcgc accgcgtcgg cggacgccac ggccccgaac gtgcccttga
     1621 agccgtcggc ggcatgggcg gcggggatga agacgccggc cgcggtcaga gccaggccgg
     1681 ccggaacgac gaccagaccc atcctgcgca aagccatcct gggcacaccg agtgtgggcc
     1741 gcatcgctcc ctcccgtccg ctcacggctc gaagccgggc atgcaggcca tctggttgat
     1801 cggggcgtcc caccggccct tggccaccac ctcgaccggg tagccgcaca cgaccttctt
     1861 cttgttcggc tgtgccgcac tgaaccgcag cgggtaggtg agacccccga ggtcgttgcc
     1921 gttgagggaa ttcagcccgt tgatcacgtc ccggctcgtc accgctccgg tgcgcggcac
     1981 cgcggtggtg gcggcctcga aggccttggc cgtcgtccag ccgttgatgg cggcggggcc
     2041 gaagatggcg tcgtgcacgt gcttcttgaa gatcgccctg tgctcggcga cggcgggcgc
     2101 attggcgaac cacggcgcca cgttcatgcc gaccaggctg ccgaccatgt tcgggttgtc
     2161 cttgaagtcg tcggtgccct ggatggaggc ggcggcgatc ggggcgttga agccgacctt
     2221 ggcgcaggag ttgaccagcc gctggttcgt ctggccgtcg agggaggtga tgaacgccgt
     2281 cacgccgttg ttgcgggcct ccaggcaggt ggccgtgtag tccggggcgg tgatggtgac
     2341 gtcggcctgg tagacgaggt cgaagccgaa cttcgggccg aactccttca ccgtcttgtc
     2401 gaagatcggg cagtactccg cttcgacgca cgacaccgtg ccgatcttct tcttcccggc
     2461 cgggatccac acccgggacg cctggaagac ctggttcatc tgcatgggga cgcccatggc
     2521 gaagaccggg aactgcatcg acttgtcgta ggtgaacatc tcgcctccgc cgccgccgat
     2581 caccgggacc tgcttctgct ccaggtaatc ggcgccggcc tgggcggcga aagagtcggg
     2641 gttgaacacg aaggcgatga cgccttcccg ttcgacgaac tgccggacga gcgcctggta
     2701 tcgggccggg tccccgccgc tgtcgccgat caggtgcttc acggcgtggc agttgatgcc
     2761 gcccttttcg ttgatctcgg cggcccaggc cgacacggcc ttggccccgg gggcgaacag
     2821 gtacccgacc accccggaca tggtccccac gctgccgatg acgatggggg gctcggatcc
     2881 gctgcagccg gccggcgtcg aggggagacc gggggcaccg ggggcggcgc ctccacccgc
     2941 cgggccgccc ggctcagccg acttcgttcc ggccgcggcc gtcgccgcac ccggggactt
     3001 ctggcccgga gccggcgtgc ccgacgccgt tccggccgcc gatcgggagc tcggcccggc
     3061 cgccgcgccc ggcgcgccgg ccgaggcgga cgctccggcg ctcggcgtcg ccgccgagcc
     3121 cgacgccggg acggcggcgg acgctccggc atcgcccgtg gcggccggcg tgtcggccgc
     3181 cggtgcggcc gatcccggcg cggcggccgg cgccggcgcg ccctggttct tgccgttgag
     3241 gagggcgttg agcttgtcgg aggagctgcg gttcccgcac gccgttgtgg ccagcacgac
     3301 ggcgccggcc accgccacga ggcgcatcgt ccgcgaagcc atcaatctcc tgcccggtcc
     3361 ggcgtcgtcg tgacggtgtc gcgctctgcg cattgcccgc tcccccttct gccatcgaat
     3421 gacggcccgg cgccgaaacg gggtacaccc ctggagcaac cggcccaccg gtcaccgctg
     3481 gcaccgtgca cggctgcccg acggttccgc tcatcgcctt cgccgagcct cgatcggggc
     3541 ccgggttcag gcggatgcta acggcattga tcggacgaat tcaaggagtt catccgatgt
     3601 gtcgccctca agatcgccca gcgacccccg ggacatccga tcacgcggtg ggcgcccgct
     3661 tcgccttacg gcggctgccc ttctccagac cgagttcggc cgggacgggc gtggccggcg
     3721 gcggggtggt gtcgccgagg aggtgtcgca gccagttgtc ggaggcggcc acgaggagcg
     3781 tcgacgccgc ctgggccaga tcggcgtcgc gggcggccag cgcgtcgacg atcacctggt
     3841 gctgggccag ggtccaggcc ttggtgccac cacccgagat ggcccgccag acccggccct
     3901 tcgtcgtgcg ggtcacgagc gcctcgagca gcgactccag cgtggcgttg ccggccgcct
     3961 tgatcacgag gcgatggaac tccatgtcct cggcgacgag ctcctccgtc gtctcggcct
     4021 gacgcatccg ggcgaaggac tcccggacgg cgttcatcgt cttctcgtcg atgcggtcgg
     4081 ccgccaggct gatggccgcc ggctcgagga tgcggcgcac ctcgctcagc tccaacaccg
     4141 tgcggtcctg catgaggtcg accacgaagc tgaggccgct caggagcagg tgcggctcca
     4201 ggctggtgac gtaggtgccg tcgccgcgac ggacgtcgag gaccttggcc tggatgagcg
     4261 cccggaccgc ttcccggagc gtgttgcggg agacgccgac gagggcggcc agttccggtt
     4321 cgggcggcag ccggtccccg ggggccagct cgccggacgc gatcaggtcc cgcagcttgc
     4381 tgatggccga ttcgattgcg cccaccgggg gctctccctc tcccgcctgt actcgacaga
     4441 gtgtgacatg ccggcggccg cattcgaaag gattcgtcgg gtcagtcggc aacgccgcac
     4501 ctaggatgtc ggcccgacgg ccgttccgcc gggaagggag ggaccgggac atgacattga
     4561 ctccggacga cgtgcgctcg ctgctgacgg cgttcgatgc gagcgtgtgg caggagatga
     4621 cgctgaccag cggtccggat cggctccatg tctcccggcg gatggacggc ccgccgccgg
     4681 tcgccgccgc gccgtccggt gcctctggtc atcgggtgaa tcccggggta gtgtcctccg
     4741 ccgcagcgga gatcaccgtc cggtccccgt ccatcggcgt gttccgccgg gcgggccacc
     4801 ccggcgcgcc ggacggcgcc ggcctcggct ccgtcgtcgg gccgggggag gcgatcggct
     4861 tcgtcgacgt gatgggccgc gtcatccccg tcgaggcgga ggtgagcgga accgtctcgg
     4921 cggtgctggc cgacgacggg gcgacggtgg agtacggcga agcggtggcg cggctcgttc
     4981 ccgaccgagg agactgacgt tggcaacggt ggagatcgtc gatcagtcgc tgcgcgacgg
     5041 gcagcagagc ctgtgggg
//
LOCUS       DATGJT010000061         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1459802, whole genome shotgun sequence.
ACCESSION   DATGJT010000061 DATGJT010000000
VERSION     DATGJT010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1459802"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1957)
                     /locus_tag="VKX24_01050"
     CDS             complement(149..1957)
                     /locus_tag="VKX24_01050"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012935676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HLJ07095.1"
                     /translation="MSATAAAPTANKKLLEWVEEIAALVTPDRVEWCDGSAEEYDRLC
                     QLLVDQGTFVRLNEDARPNSYWCHSDPGDVARVEDRTFICSKREVDAGPTNNWVEPDE
                     MRARLKPLLTGCMRGRTMYVVPFSMGPLGSDKAYIGVELTDSPYVAVSMRIMTRMGNG
                     ALEVLGEHGDFVPCLHSVGAPLEPGQADVPWPCDAENKYIVHFPETREIVSYGSGYGG
                     NALLGKKCFALRIASVIARDEGRLAEHMLILKLTSPQGESRYVTGAFPSACGKTNLAM
                     LIPTLPGWKVETVGDDICWMKFDDEGRLRAINPEAGFFGVAPGTNDHTNPNAMLTLSG
                     NCIFTNTALTDDGDVWWEGMGDPPAHCTDWRGEEWTPEKGTPAAHPNARFTAPAAQDP
                     AIAPEWEDPDGVPISAILFGGRRATNVPLVTEAFDWEHGVFLGSIMSSETTAAQAGAV
                     GKLRFDPFAMLPFCGYNMADYFGHWLEIGTATDADKLPKLFWVNWFRRGSDGSFLWPG
                     FGENSRVLKWILERVTGVGRAVDTAIGRVPADGALDTTGLDIDPSVLTELTTVDREKW
                     RQELPQIESHYEKFGERLPGVLQDQLKDLEKRLAES"
BASE COUNT          310 a          712 c          779 g          342 t
ORIGIN      
        1 cgcctgaaca tcgtcatgga cacgcccgac gccaacacgc tgatgggcaa ggcgctggcg
       61 gcctggtcgc agaacaccga cgggacgacc atctccggct ccgggccctt caccgtcaac
      121 tcctgcggct aggagccgga gggggctcct agctctcggc caggcgcttc tcgaggtcct
      181 tcagctggtc ctggaggacg ccggggagcc gttcaccgaa cttctcgtag tggctctcga
      241 tctggggcag ctcctggcgc cacttctccc ggtcgacggt cgtgagctcg gtcaggacgg
      301 aggggtcgat gtcgagcccc gtggtgtcga gcgccccgtc ggcgggcacg cgtccgatgg
      361 cggtgtcgac ggcccggccc actccggtca cccgctccag gatccacttg aggacccggg
      421 agttctcgcc gaagccgggc cacaggaacg agccgtcgct cccccgccgg aaccagttca
      481 cccagaacag cttcgggagc ttgtcggcgt cggtggccgt cccgatctcc agccagtgcc
      541 cgaagtagtc ggccatgttg tagccgcaga acgggagcat ggcgaagggg tcgaaccgca
      601 gcttcccgac cgcgccggcc tgggcggcgg tggtctccga gctcatgatc gagccgagga
      661 agacgccgtg ctcccagtcg aaggcctcgg tgacgagcgg cacgttcgtc gcccggcggc
      721 cgccgaagag gatggccgag atcggcaccc cgtcggggtc ctcccactcg ggggcgatcg
      781 ccgggtcctg ggcggcgggg gcggtgaagc gggcgttcgg gtgggcggcg ggggtgccct
      841 tctccggcgt ccactcctcg cccctccagt cggtgcagtg cgccggcggg tcgcccatgc
      901 cctcccacca gacgtcgccg tcgtcggtga gggcggtgtt ggtgaagatg cagttgcccg
      961 agagggtcag catcgcgttg gggttggtgt ggtcgttcgt gcccggggcc acgccgaaga
     1021 agccggcctc gggattgatc gcccgcagcc ggccctcgtc gtcgaacttc atccagcaga
     1081 tgtcgtcgcc gaccgtctcc accttccagc ccggcagggt ggggatgagc atggccaggt
     1141 tggtcttgcc gcaggcggag gggaacgcgc cggtcacgta ccgggactcg ccttggggcg
     1201 aggtcagctt caagatgagc atgtgctcgg ccagccggcc ctcgtcgcgg gcgatgaccg
     1261 aggcgatgcg cagggcgaag cacttcttgc cgaggagggc gttgcccccg tagcccgagc
     1321 cgtaggagac gatctcccgg gtctcgggga agtggacgat gtacttgttc tcggcgtcgc
     1381 acggccaggg cacgtcggcc tggcccggct cgagcggggc gccgaccgag tggaggcagg
     1441 gcacgaagtc gccgtgctcc ccgagcacct cgagggcgcc gttccccatg cgggtcatga
     1501 tccgcatcga gacggccacg tagggggagt cggtgagctc gaccccgatg taggccttgt
     1561 ccgagccgag cgggcccatg gagaagggga cgacgtacat cgtgcgcccg cgcatgcacc
     1621 cggtgagcag cggcttcagg cgggcccgca tctcgtcggg ctcgacccag ttgttggtcg
     1681 gcccggcgtc gacctcgcgc ttggagcaga tgaaggtccg gtcctcgacc cgggcgacgt
     1741 cgccggggtc ggagtggcac cagtagctgt tgggccgggc gtcctcgttg agccggacga
     1801 aggtcccctg gtcgacgagg agctggcaca ggcggtcgta ctcctcggcc gagccgtcgc
     1861 accactcgac gcgatccggc gtgaccagcg ccgcgatctc ctccacccac tcgagcagtt
     1921 tcttgttggc ggtgggagcg gcggctgtcg ctgacatccg gacaccttcc ttgggacggt
     1981 tggctgggct ggacggacca ctcggttgtg tggccgacaa tgctaggcat ggacggtggt
     2041 ccaccccaaa cagccaccac gctcgggtga ccgttcaccg accggcgaag atgccgcgct
     2101 acagcgtatc ggaaagctgc tcgagaccag gctgggggct ccg
//
LOCUS       DATGJT010000062         3388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1045307, whole genome shotgun sequence.
ACCESSION   DATGJT010000062 DATGJT010000000
VERSION     DATGJT010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045307"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="VKX24_01055"
     CDS             <1..687
                     /locus_tag="VKX24_01055"
                     /inference="COORDINATES: protein motif:HMM:NF044477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07096.1"
                     /translation="LGHLRDLRYESVLHLAALVPGEREHCEQIAELALQLFEGLRHLT
                     GLSDEAEEWLEAAALLQNVGLVISHDRHHLHSYYVIRNSELLTGFTEHELEIIALVAR
                     YHRKSTPKTRHPEYAGLPEADQRVVEILSGVLRIAAGLDRTRCGAVSRLRVVDGEGPG
                     GRGRAGGRGAPLRILVETAPGADADLELYSARNRKDLLEDALGVTVEIEAVPPGLLRV
                     APAHPAAGAG"
     gene            complement(718..1707)
                     /locus_tag="VKX24_01060"
     CDS             complement(718..1707)
                     /locus_tag="VKX24_01060"
                     /inference="COORDINATES: protein motif:HMM:NF021509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygenase MpaB family protein"
                     /protein_id="HLJ07097.1"
                     /translation="MSPPLPSSVATEPWIPPTPSLVETAAGAAAGAWAAVGAPVLVRL
                     VRLGLSPLGVSRHGGLPPRNGEGAEADGDPGWFGPDSVTWRVHADTSMLVAGMTAFAL
                     QALHPRAMAGVWDHSAFGGDFFGRTRRTGEFVQGVVYEPSAAAEQRCAGLRRIHDRVV
                     GHTPDGRPYSAGDPELLEWVHVTEYLAIASANRRFAAHPMTRTELDVYVAEVARVGSA
                     VGVVDPPRSWAELDATFRRHAPELGLGEQAATAVRFLEDPPFLPAAARPPWRAVWAGT
                     LACLPPLGRTLLRTSEPPLPEVAACRALVRAVGRLLGEPLPLRHARRRLGIDP"
     gene            1760..2644
                     /locus_tag="VKX24_01065"
     CDS             1760..2644
                     /locus_tag="VKX24_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012924332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07098.1"
                     /translation="MDPFAGGAGFLEREGRILERRLFATVFEGAPAAGVVDAVRGYRN
                     PDGGFGHGLEPDKRCPDSLPIDVEAAFEALLAAGPAAVAEAGPLVLAACDWLGAVAAP
                     GGAVAASFPVIEAHPRAEHWSDWTYVPGLNPTAGLAGRLHCMGVIHPWLDRATEWCWG
                     RLAECSGPAGFGEDAHALAEVMLFLAHVPDRARAETVGAPVPDWLAKAAWYRADPADP
                     SYGVTPLHLAPEPGGYWSRLFDADLIGGHLDRLLADQQPDGGWAITWEPPGTAATLEW
                     RGIETLRALRTLRAYGRL"
     gene            2684..3109
                     /locus_tag="VKX24_01070"
     CDS             2684..3109
                     /locus_tag="VKX24_01070"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLJ07099.1"
                     /translation="MAREMQRWAAVAVLGAGLVVGACGGGGGSDKAKSAGGGPPGPEK
                     TALETPAGPKLEVSAKEFAFTPSALSMKAGQATDIVLHNAGSIEHDFSVPDVGFKLSM
                     PPSETGDLALTIAKPGTYPFHCSVPGHEGAGMKGTITVE"
BASE COUNT          419 a         1250 c         1321 g          398 t
ORIGIN      
        1 ctcgggcacc tgcgcgacct ccgctacgag agcgtgctgc acctggcggc gctggtgccg
       61 ggggagcggg agcactgcga gcagatcgcc gagctggccc tgcagctctt cgagggcctc
      121 cggcacctga ccgggctctc ggacgaggcg gaggagtggc tggaggcggc ggcgctgctc
      181 cagaacgtcg ggctggtgat cagccacgac cgccaccacc tccacagcta ctacgtcatc
      241 cgcaatagcg agctgctgac cggcttcacc gagcacgagc tggagatcat cgccctcgtg
      301 gcccgctacc accgcaagtc gacgcccaag acccgtcacc cggagtacgc cggcctcccc
      361 gaggccgacc agcgggtggt ggagatcctc tccggggtgc tgcgcatcgc cgccgggctc
      421 gaccgcaccc ggtgcggggc ggtgagccgg ctgcgggtgg tggacggtga ggggcccggc
      481 gggcggggcc gcgccggcgg ccggggagcg ccgctgcgga tcctcgtcga gacggcgccg
      541 ggggccgacg ccgacctcga gctgtactcc gcccgcaacc gcaaggacct cctggaggac
      601 gccctcggcg tcacggtcga gatcgaggcg gtgcccccgg ggctgctgcg ggtggcgccg
      661 gcccacccgg cggccggggc cggataaccg agccggcgcc tccggcggcc ggagggctca
      721 ggggtcgatc cccagccgcc ggcgggcgtg gcggaggggc agcggctcgc cgaggagccg
      781 gccgacggcc cggaccagcg cccggcaggc ggcgacctcg ggcaggggcg gctccgacgt
      841 ccgcagcagc gtgcggccca gcggcggcag gcaggccagg gttccggccc acaccgcccg
      901 ccacggcgga cgggccgccg ccggcaggaa cggcgggtcc tccaggaacc gcacggcggt
      961 ggccgcctgc tcgccgaggc cgagctcggg ggcgtggcgg cggaaggtgg cgtcgagctc
     1021 ggcccagctc cggggagggt cgacgacccc gacggccgag ccgacccggg ccacctcggc
     1081 cacgtagacg tcgagctcgg tgcgggtcat ggggtgggcg gcgaagcggc ggttggccga
     1141 ggcgatggcc aggtactccg tgacatggac ccactccagc agctcagggt cgccggccga
     1201 gtagggccgc ccgtcgggcg tgtggccgac gacccggtcg tggatgcggc gcagcccggc
     1261 gcagcgctgc tcggcggcgg ccgacggctc gtagacgacg ccctggacga actcgcccgt
     1321 ccgccgggtg cggccgaaga aatcgccccc gaaggcactg tggtcccata cgccggccat
     1381 ggcccggggg tgaagcgcct ggagggcgaa ggcggtcatg cccgccacca gcatcgaggt
     1441 gtcggcgtgg acccgccagg tcacgctgtc ggggccgaac cagcccgggt cgccgtcggc
     1501 ctcggcgccc tccccgttcc ggggcggcag gcccccgtgg cgggagacgc cgaggggcga
     1561 gagcccgagc cggacgagcc gcaccagcac cggcgccccc accgcggccc aggccccggc
     1621 cgccgccccg gccgccgtct cgaccagtga cggcgtgggc gggatccacg gttcggtggc
     1681 gacggacgac ggcagcggcg ggctcacggc ggactcctcc cgagaatcgc tctcgtctca
     1741 tggtggcaga ctgccggccg tggacccttt cgccggcggg gccggcttcc tggaacggga
     1801 gggccgcatc ctcgagcggc gcctgttcgc cacggtgttc gagggcgcgc cggcggccgg
     1861 agtcgtcgac gccgtgcgcg gctaccgcaa tcccgacggc gggttcggcc acggcctgga
     1921 gcccgacaag cgctgccccg acagcctgcc catcgacgtc gaggccgcct tcgaggcgct
     1981 gctggccgcc ggtcccgccg cggtggcgga ggcggggccg ctggtgctgg cggcctgcga
     2041 ctggctcggg gcggtggccg ctcccggggg cgccgtggcg gcgtcgttcc cggtcatcga
     2101 ggcccatccc cgggccgagc actggtcgga ctggacgtac gtcccgggcc tcaacccgac
     2161 cgccggtctc gccgggcggc tgcactgcat gggcgtgatc catccctggc tggaccgggc
     2221 caccgagtgg tgctggggca ggctggcgga gtgctccggg ccggccggct tcggcgagga
     2281 cgcccacgcc ctggcggagg tgatgctctt cctggcccac gtcccggacc gggcccgggc
     2341 cgagacggtc ggggcgccgg ttccggactg gctggccaag gcggcctggt accgggccga
     2401 cccggccgac ccgtcctacg gcgtgacgcc gctccacctg gcgcccgaac ccggcggcta
     2461 ctggagccgg ctgttcgacg ccgatctgat cggcgggcac ctcgaccggc tgctggcgga
     2521 ccagcagccc gacggcggct gggccatcac ctgggagcct cccggcacgg cggcgacgct
     2581 ggaatggcgc gggatcgaga cgctccgcgc cctccggacg ctgcgggcct acggccggct
     2641 ctgactcgga gccctgccgg gccggtcggt acgatgccgc gccatggcga gagagatgca
     2701 gcgctgggcg gccgttgccg tgctgggggc ggggctcgtg gtcggggcct gcggcggagg
     2761 cggcggctcc gacaaggcca agagcgccgg cggcggcccg ccggggccgg agaagacggc
     2821 gctcgagacc cccgccgggc ccaagctcga ggtgtcggcc aaggagttcg ccttcacccc
     2881 ctcggcgctc tccatgaagg ccggtcaggc caccgacatc gtcctccaca acgccgggag
     2941 catcgaacac gacttcagcg tccccgacgt cggattcaag ctctccatgc cgccgtcgga
     3001 gaccggcgac ctggcgctga cgatcgccaa gcccggcacc tacccgttcc actgctcggt
     3061 gcccggccac gagggcgccg gcatgaaggg cacgatcact gtcgagtagc gccgttcccg
     3121 atatcggcgg ccggccgttc tatgacgccc ggccgcagcc gtggacgctc gacgacctct
     3181 gcgacttcgc cgccgccacc ggggacccct acgggggacg cctggccggt cccgtcccac
     3241 ccttctccct gcagctggag gcgggcgagc cgccggtgtg ggtcgggctc ggaccggacg
     3301 agctggtgca gtggtcggtg gcgctggagc gggtgctggc ccgctggggg gtggacgccg
     3361 gcgacaccgt cggcttctac gactacgg
//
LOCUS       DATGJT010000063         2797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_837625, whole genome shotgun sequence.
ACCESSION   DATGJT010000063 DATGJT010000000
VERSION     DATGJT010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2797
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_837625"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1952)
                     /gene="acs"
                     /locus_tag="VKX24_01075"
     CDS             complement(<1..1952)
                     /gene="acs"
                     /locus_tag="VKX24_01075"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HLJ07100.1"
                     /translation="MADTELQHIDALLEELRVIDPPDGFRSQAVASDEEIYARAAADP
                     DGFWAEQAERLTWSKPWDTVMDWNPPWVRWFVGGKLNVAVNCLDRHVEANPDRVAYHW
                     EGEPGDTRTITYRDLYEDVCRFANALKAMGVAKGDRVAMYLGMVPELPIAMLACARIG
                     ATHSVVFGGFAAEALRDRINDAQAKVLVTGDGAWRRGNVVPLKAAADAAVAECPSIEK
                     VVVVRRTGQEVGWVDGRDVWYHDAVAGQEASCLPEEMDAEDPLYILYTSGTTGKPKGI
                     LHTTGGYLTGVSATHRMVFDIHPDRDVYWCAADVGWVTGHSYIVYGPLANGTTSIIYE
                     GAPDFPDKERWWSIIERYKATILYTAPTAIRTFMKWGPAHLSRHDLSSLRLLGSVGEP
                     INPEAWMWYYAHVGGQRCPVVDTWWQTETGAIMISPLPGITRLKPGSATRPLPGIFAD
                     IVDEAGKPVGTGRGGYLVLRRPWPAQFRTIYGDPDRYVANYFGRFGPEVYLAGDGARQ
                     DEDGYFWLLGRIDDVMNVAGHRLSTYEIESALVDHASVAEAAVVSRPDAIVGEAIVAY
                     VTLKSGVTGDEVLIAELREHVAIKIGKIARPHAIVLTDDLPKTRSGKIMRRLLRDVAH
                     GRDLGDVTTLANAEVVVHIRELASEAP"
     gene            2115..>2797
                     /locus_tag="VKX24_01080"
     CDS             2115..>2797
                     /locus_tag="VKX24_01080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HLJ07101.1"
                     /translation="MAVDTPIYNPLDPATHADPYPSYRRLRELAPVHHSPLGILVLSR
                     FADIDAVLRDPRFGHTMSDEVQMLKVIHGPGAATVDEFSRWMLFLDPPDHTRLRGLVQ
                     KAFTPRAIEALRPRITELVDQFVGAFLAHLDADGQADIVNELALPLPVTVITEMLGLP
                     IEDEPQTRLWAEAIAQALDPIISEEEALRSDDAVAHLTSYISSVVEERRRSPGPDLLS
                     KLIQAEDSGG"
BASE COUNT          395 a         1004 c          965 g          433 t
ORIGIN      
        1 ggcgcctcgg aggcgagctc ccggatgtgg acgaccacct cggcgttggc cagcgtggtc
       61 acgtcgccca ggtcccggcc gtgggcgacg tcgcggagga gccggcgcat gatcttgccc
      121 gaccgggtct tcgggaggtc gtcggtcagc acgatggcgt gcgggcgggc gatcttgccg
      181 atcttgatgg cgacgtgctc gcgcagctcg gcgatcagca cctcgtcgcc ggtgacgccg
      241 ctcttcaggg tgacgtaggc cacgatcgcc tcgccgacga tcgcgtcggg ccgggacacg
      301 acggccgcct ctgccaccga cgcgtggtcg acgagcgccg attcgatctc gtaggtcgac
      361 agccggtggc cggcgacatt catcacgtcg tcgatccgcc cgagcagcca gaaatagccg
      421 tcctcgtcct ggcgggcgcc gtcgccggcg aggtagacct ccggaccgaa gcggccgaag
      481 tagttggcca cgtagcggtc ggggtcaccg tagatcgtcc tgaactgcgc cggccagggc
      541 cggcggagca ccaggtaccc gccccggccg gtcccgacgg gcttgcccgc ctcgtcgacg
      601 atgtcggcga agatgcccgg cagggggcgg gtggccgagc ccggcttcag ccgggtgatc
      661 ccgggcagcg ggctgatcat gatggcgccg gtctcggtct gccaccaggt gtcgacgacc
      721 gggcagcgct ggcccccgac gtgggcgtag taccacatcc aggcctccgg gttgatcggc
      781 tcgcccaccg acccgagcag ccgcagcgac gagaggtcgt ggcgcgacag gtgggccggg
      841 ccccacttca tgaaggtgcg gatggcggtc ggagcggtgt acaggatcgt ggccttgtag
      901 cgctcgatga tcgaccacca gcgttccttg tccgggaagt ccggcgcccc ctcgtagatg
      961 atgctcgtcg tcccgttggc cagcggcccg tagacgatgt aggagtgacc ggtcacccag
     1021 ccgacgtcgg cggcgcacca gtagacgtca cggtcggggt ggatgtcgaa gaccatgcgg
     1081 tgggtggcgg aaaccccggt gaggtagccc ccggtggtgt gcaggatgcc cttcggcttc
     1141 ccggtggtcc cggaggtgta caggatgtag agcgggtcct cggcgtccat ctcctcgggg
     1201 aggcagctgg cctcctggcc ggcgaccgcg tcgtggtacc agacatcgcg gccgtcaacc
     1261 caaccgacct cctgcccggt gcggcgcacg acgacgacct tctcgatcga cgggcactcg
     1321 gcgacggcgg catcggcggc ggccttgagc ggcacgacgt tgccgcggcg ccaggccccg
     1381 tcgccggtga ccagcacctt cgcctgggcg tcgttgatcc ggtcccgcag cgcctctgcg
     1441 gcgaacccac cgaagaccac cgagtgggtt gccccgatgc gggcgcaggc cagcatggcg
     1501 atcggcagct cgggcaccat gccgaggtac atcgccaccc ggtcgccctt ggcgaccccc
     1561 atcgctttga gggcattggc gaagcggcag acgtcctcgt acaggtcccg gtaggtgatc
     1621 gtgcgggtgt ctccgggctc gccctcccag tgataggcga cccggtcggg gttcgcctcg
     1681 acgtggcggt ccaggcagtt gacggcgacg ttgagcttgc caccgacgaa ccagcggacc
     1741 cagggtgggt tccagtccat cacggtgtcc cacggcttcg accaggtgag gcgctccgcc
     1801 tgctctgccc agaacccgtc cgggtcggcc gcggcccggg cgtagatctc ctcatccgag
     1861 gccaccgcct ggctgcggaa cccgtccggc gggtcgatca cccgcagctc ctccaggagc
     1921 gcgtcgatgt gctggagttc tgtgtcggcc atggttgacc ctccttttcc cccgcccacc
     1981 cagcccggct gctgtgctcc ccgtcccggt tgcaagaccg tggagcgttg acgctaccgt
     2041 attcctccca ggccccgtcc gggatgccgc tggtagcctg gaaggacccc accccctcga
     2101 tccgggagcg ccccatggcc gtcgataccc cgatctacaa cccgctcgac ccggccaccc
     2161 acgccgaccc ctacccctcc taccgccgtc tccgcgagct ggcccccgtc caccacagcc
     2221 cgctggggat cctggtgctg tcccgcttcg ccgatatcga cgcggtgctg cgggacccgc
     2281 ggttcggcca cacgatgtcc gatgaggtcc agatgctgaa ggtgatccac gggccggggg
     2341 ccgccaccgt cgacgagttc agccgctgga tgctgttcct cgacccgccc gaccacaccc
     2401 ggctccgcgg cctggtacag aaggcgttca cgccgcgggc gatcgaggcc ctgcggccgc
     2461 ggatcaccga gctggtggac cagttcgtcg gcgccttcct tgcccacctc gacgccgacg
     2521 gccaagccga catcgtcaac gagctggccc tgcccctgcc ggtgaccgtc atcacggaga
     2581 tgctgggact gccgatcgag gatgagcccc agacgcggct gtgggcggag gcgatcgccc
     2641 aggcgctcga cccgatcatc agcgaggagg aggccctgcg ctcggacgac gccgtggccc
     2701 acctgacctc gtacatctcc tcggtcgtcg aggagcggcg ccgctccccg ggcccggacc
     2761 tgctgtccaa gctgatccag gcggaggaca gcggcgg
//
LOCUS       DATGJT010000064         3033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_837651, whole genome shotgun sequence.
ACCESSION   DATGJT010000064 DATGJT010000000
VERSION     DATGJT010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_837651"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..880)
                     /locus_tag="VKX24_01085"
     CDS             complement(<1..880)
                     /locus_tag="VKX24_01085"
                     /inference="COORDINATES: protein motif:HMM:NF014827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HLJ07102.1"
                     /translation="MTAAPDDRALLDTEELVVFHDRASGLGAAIAIDDSTLGPAIGGV
                     RWRRYPDEAAAVTEVRRLARVMTLKSALAGIPSGGAKSVVFRPAPGVDEDARRRLMEA
                     FGRAVKRLDGRYVPGLDMGTSLDDLRTMAKEAPGICVLEPSHATAVALFAGIRAAASL
                     HWPKGLVGRHVLVQGAGHVGSALAGMLTQGGATVTLDDVDTARAAEVARAVGGAVVEP
                     DAVIGHACDVFAPCAVGRLVDASSAGAFRCQLIAGAANDVLAHRDGAEALRALGVDYV
                     PDFAINSGGVIAIHAAR"
     gene            1182..2732
                     /locus_tag="VKX24_01090"
     CDS             1182..2732
                     /locus_tag="VKX24_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07103.1"
                     /translation="MYAAEHARKNPDKPAIIMATGGEVVTYGEYEAAANRFAHLVRDS
                     GLVRGDHLAIFSDNNPSMLVAEGGSERTGLYFTTVNSYLSPEEVAYIINDSQSKVVVA
                     AAGKAEVAHQLPALCPDVQRWLMIGDEAIDGPYESFDQAVGAYPSEPIADEQVGIAML
                     YSSGTTGRPKGIFRQLPDASPTEGARMSGGLGMLWRFREGMVYLNPAPLYHSAPQASV
                     AITIRLGATAVIMEHFDAAQFLQLVEKYRVTHSQVVPTMFNRLLKLPEEVRKAADVSS
                     LEVIVHAAAPCPVPVKEQMINWFGPIILEYYAATEGNGFTFVDSNDWMAHKGTVGKAL
                     VAQVLILDEDGNECPTGVPGTVWFKGATNFEYFRDPEKTAESRNAAGDTSTVGDVGYL
                     DEEGYLYLTDRKTYMIISGGVNIYPQETENLLVTHPKVMDAAVIGVPDEDLGEVVKAV
                     VQPADGIEPSEELERELIAFCREHLAHFKCPRSIDFEAELPRLPTGKLYKRLLRDRYW
                     QDHATSIL"
     gene            complement(2738..>3033)
                     /locus_tag="VKX24_01095"
     CDS             complement(2738..>3033)
                     /locus_tag="VKX24_01095"
                     /inference="COORDINATES: protein motif:HMM:NF039409.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6328 family protein"
                     /protein_id="HLJ07104.1"
                     /translation="ASIMLSALATVLLSGPVAYHRLLFRQHDKPRLLAVANVMAVGGL
                     AAVALAVSTAVLLVTSFVVHGAAGPVLAGCTAAAFAALWFAFPAARRWQRRPE"
BASE COUNT          469 a         1109 c         1075 g          380 t
ORIGIN      
        1 cccgggccgc gtggatggcg atgacaccgc cggagttgat ggcgaagtcg ggcacgtagt
       61 cgacgccgag ggcccgcagg gcctcggccc cgtcgcggtg ggcgaggacg tcgttggcgg
      121 cgcccgcgat cagctggcaa cggaaggcgc cggccgacga ggcgtcgacg aggcgaccga
      181 cggcgcacgg ggcgaagacg tcgcaggcgt ggccgatcac cgcgtcgggc tcgaccaccg
      241 cccccccgac cgccctcgcc acctcggcgg cgcgggcggt gtcgacgtcg tcgagcgtca
      301 ccgtcgcgcc gccctgggtc agcatccccg cgagggccga gccgacgtgc ccggcgccct
      361 ggacgaggac gtggcgcccg accagcccct tcggccagtg gagggaggcg gcggcccgga
      421 tgccggcgaa caacgcgacg gcggtggcgt gggagggctc gagcacgcag atgccggggg
      481 cctccttggc catcgtccgc aggtcgtcga gggacgtccc catgtcgagc ccggggacgt
      541 agcggccgtc gagccgcttg accgcacggc cgaacgcctc catcagcctc cggcgggcgt
      601 cctcgtcgac ccctggagcc gggcggaaca cgacggactt ggcgccgccg ctcgggatgc
      661 cggcgagcgc gctcttgagc gtcatgaccc gcgccagccg ccggacctcg gtgacggcgg
      721 cggcctcgtc ggggtaccgc cgccagcgga cgccgccgat ggccgggccg agcgtgctgt
      781 cgtcgatggc gatggccgcc ccgagccccg aggcgcggtc gtggaagacg acgagctcct
      841 cggtgtcgag gagcgcccgg tcgtccggcg ccgccgtcat cctgccgggc gcgagtcggg
      901 agggacccac ggcacgggac agtcctactc cctgggggtc ggcaaaggaa gccatgtccg
      961 ccccgggtgt ccgcccggtc tgcggggccg gggccccgtc gtccgcttgc acgcgtgccg
     1021 tcaccgcaac gccttcatgt cccacctgga ggtatacccg cgccggccct ccgcgagtcg
     1081 cgtcgcggcc cggccgccgc cggaggtgat gtggcagact cgtcgtcacc aggggggcgg
     1141 ctcgagccgc gctccgtcgc cgtacaccga caggagccac catgtacgcc gccgagcacg
     1201 cccggaagaa ccccgacaag ccggccatca tcatggcgac cggtggcgag gtggtcacct
     1261 acggcgagta cgaggccgcc gccaaccgct tcgcccatct cgtgcgcgac agcggcctcg
     1321 tccgcggcga ccacctggcg atcttctcgg acaacaaccc gagcatgctc gtggccgagg
     1381 gcgggtccga gcgcaccggc ctctacttca ccaccgtcaa ctcctacctc tcgcccgaag
     1441 aggtcgccta catcatcaac gactcccagt ccaaggtcgt ggtggcggcg gcgggcaagg
     1501 ccgaggtcgc ccaccagctg cccgcgctgt gcccggacgt gcagcggtgg ctcatgatcg
     1561 gcgacgaggc gatcgacggc ccctacgagt ccttcgacca ggcggtcggg gcctacccct
     1621 ccgagccgat cgccgacgag caggtcggga tcgccatgct ctactcgtcg gggacgaccg
     1681 gccggccaaa ggggatcttc cgccagctgc ccgacgccag cccgaccgag ggcgcccgga
     1741 tgagcggcgg cctcgggatg ctgtggcggt tccgggaggg gatggtgtac ctcaacccgg
     1801 ccccgctgta tcactcggcc ccgcaggcca gcgtcgccat caccatccgg ctcggcgcga
     1861 cagcggtgat catggagcac ttcgacgccg cccagttcct ccaactggtc gagaagtacc
     1921 gcgtcaccca ctcccaggtg gtgccgacca tgttcaaccg cctgctcaag ctgcccgagg
     1981 aggtgcgcaa ggcggccgac gtctcctccc tcgaggtgat cgtgcacgcc gcggccccgt
     2041 gcccggtgcc ggtgaaggag cagatgatca actggttcgg gccgatcatc ctcgagtact
     2101 acgcggcgac cgagggcaac gggttcacct tcgtcgactc gaacgactgg atggcccaca
     2161 agggcacggt cggcaaggcg ctcgtcgccc aggtcctcat cctcgacgag gacggcaacg
     2221 agtgcccgac cggggtcccg ggaacggtgt ggttcaaggg cgccaccaac ttcgagtact
     2281 tccgggaccc ggagaagacc gccgagtccc gcaacgccgc cggggacacg agcaccgtcg
     2341 gcgacgtcgg ctacctcgac gaggagggct acctctacct gaccgaccgc aagacctaca
     2401 tgatcatctc gggaggggtg aacatctacc cccaggagac cgagaacctg ctcgtcaccc
     2461 acccgaaggt catggacgcg gcggtgatcg gggtgcccga cgaggacctg ggcgaggtgg
     2521 tgaaggcggt cgtgcagccg gccgacggca tcgagccctc agaggagctc gagcgcgagc
     2581 tcatcgcgtt ctgccgggag cacctggccc acttcaagtg cccccgctcg atcgacttcg
     2641 aggccgagct gccccggctc ccgaccggca agctctacaa gcggctgctc cgcgaccgct
     2701 actggcagga ccacgccacc tcgatcctct gacccgttca ctccgggcgc cgctgccagc
     2761 gccgggccgc cgggaaggcg aaccacaagg cggcgaacgc ggccgccgtg cagccggcga
     2821 gcaccgggcc ggccgcgccg tggaccacga agctcgtgac gagcagcacg gccgtcgaca
     2881 cggccagcgc caccgccgcc aggccgccga ccgccatgac gttggccacg gccaggaggc
     2941 gcggcttgtc gtgctggcgg aacaggaggc ggtggtaggc gacggggccg ctcaggagca
     3001 cggtggcgag tgctgagagc atgatgctcg cca
//
LOCUS       DATGJT010000065         4044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_215478, whole genome shotgun sequence.
ACCESSION   DATGJT010000065 DATGJT010000000
VERSION     DATGJT010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4044
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215478"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..496
                     /locus_tag="VKX24_01100"
     CDS             164..496
                     /locus_tag="VKX24_01100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07105.1"
                     /translation="MQNDIKVRVVCPGCGPLVVPAAELCCELEAKGDNGLCELRCPGC
                     SATLVVRAQAAAVEAMRGGGAGHMTGSVPFELLEPHTGPPLSWDDLLDFKLVLDGGGP
                     FLSNTDDF"
     gene            591..938
                     /locus_tag="VKX24_01105"
     CDS             591..938
                     /locus_tag="VKX24_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HLJ07106.1"
                     /translation="MPRVDFDPTLDRRGEVDWTQRAACRGQTALFFPTHAERPGAREL
                     REAQARALCLACPVLEQCRACARHHREYGFWGGETEEERAAAGYPVALPVGQLARRIR
                     ILREAALASAPKP"
     gene            complement(1006..1443)
                     /locus_tag="VKX24_01110"
     CDS             complement(1006..1443)
                     /locus_tag="VKX24_01110"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLJ07107.1"
                     /translation="MSITTKPATIAALGIMAAVALGACGGGGGRTTAKPASSAATPAT
                     ATSAGTDPSATAAAVSIEAREFSLSPSDLHAAAGNVTIQYKNAGTIQHTLVIDGVAGF
                     KLDVPKPGDVETATVKLDPGTYTLYCDIPGHRQAGMEDHLTVG"
     gene            complement(1513..2565)
                     /locus_tag="VKX24_01115"
     CDS             complement(1513..2565)
                     /locus_tag="VKX24_01115"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HLJ07108.1"
                     /translation="MPRRRFLGVLGAGGGVAAIAAGLAGFRSSGGAVGEASGGEMADM
                     AHPAAAHPVGATATTAEEMDVHHRGGVEAFERNRVAPITSGIGAVDAAFRMEGGRRVF
                     ELTAEATSWEVTAGQRVEALAFNGIVPGPTLRMVEGQPARVVVHNRLDQSTSVHWHGQ
                     RVPNAMDGVTYLTQEPIRPGGTFVYDFTPGPSGTHMYHSHYNSTEQVTKGLVGALLVQ
                     PADTAAEPAADRDYLFILNDGLGGFTVNGKGFPATPAYAARRGERVRFRFLNYGAMAH
                     PVHLHGLTYEVFARDGYPLPQPFRCDTLTIAPFERWDAIVLADNPGTWAFHCHILSHA
                     EGPEGMFGMFSALHVD"
     gene            2672..3895
                     /locus_tag="VKX24_01120"
     CDS             2672..3895
                     /locus_tag="VKX24_01120"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF019174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HLJ07109.1"
                     /translation="MAVDPGGRHEPQQEDSEPTVAADTALLEPFYLGMVRVALVLGWV
                     SAMVVAAGTVLPHLHHRHMFHGPILALAVAAAAGNSVLALLPWRRWLGTRRAAGVLTA
                     WASAVVAVVTGLVYAGGGWASDFYLLYFLVIPFLAATEPLRRQLVLYASVLAGYLVAV
                     LAVPGPSPVGLVAVRLTVLASACAVGTFLAQAVHRTTAARARAEEAARMERLLATEAH
                     HRIKNNLQLVADLLILEADRTHPDPSAVVEETLSRIQSVAAVHQSLAQRPAGRVALRP
                     VIERIAGLVGDRLGRVVRMDGDDVTLNGRAATWTALVANELVVNALRHGKGEVNVTVT
                     LQPGPAGAFAQLAVEDCGQGPAGAAPGLGLSLVRRLVEEGLAGVITSGLDGGRYRVEI
                     RFPIVEGEPHAGAHR"
BASE COUNT          577 a         1376 c         1417 g          674 t
ORIGIN      
        1 cctgggggtc gctttcgccc tcaccctcat cgcctccacc ctcgccctgg cctggttcgc
       61 ccgcctcccc tgaagcgcac caatcctccc gatatgggaa tgagatcccg gcaccggcgg
      121 ttctattatg catcattatc cgttttagac ctggaggccg acgatgcaga acgacatcaa
      181 agtccgcgtc gtgtgcccgg gatgtggacc gctggtcgtg ccggcagcag aactctgctg
      241 cgaactcgaa gccaagggcg acaatggcct ctgcgaattg agatgccccg gctgttccgc
      301 cacgctggtg gtccgggcgc aggcggcggc ggtcgaggcg atgcggggcg gtggtgccgg
      361 ccatatgacc ggaagcgtcc ccttcgagct gctcgagccc cacacgggcc cgcccctgtc
      421 ctgggacgac ctcctcgact tcaagctggt cctggacggc ggcggacctt ttctttctaa
      481 cacagacgac ttttagctat actccccgaa cggtcagttc gaggagcgcc aatggactcg
      541 atcggagccg ggagatggtc ttccttcggc cgctgaaccc tccgccggcg gtgcccagag
      601 tcgacttcga cccgaccctg gaccgccggg gagaggtcga ctggacacaa cgggccgcct
      661 gccggggcca gacggcgctg ttctttccga cgcatgccga acggcccggt gcccgggaac
      721 tccgggaggc gcaggcacgg gccctctgcc tggcctgccc ggttctcgaa cagtgccgtg
      781 cctgcgcccg acaccaccgt gagtacggtt tctggggcgg ggagacggaa gaggaacggg
      841 ccgcggccgg ctacccggta gctcttccgg tgggtcagct ggccaggcga atccgcatcc
      901 tgcgcgaagc ggcactggca tcggcgccga aaccgtgacc ggcgtggctc gtccttgacg
      961 ccccgccaac gtcggttgga tcggcagagg ctcgcagacc gggggctacc ccacggtgag
     1021 gtggtcctcc atgccggcct gccggtggcc ggggatatcg cagtacaacg tatacgtccc
     1081 ggggtcgagt ttcaccgtgg cggtctcgac gtcgccaggc ttggggacgt ccagcttgaa
     1141 gcctgcgacg ccgtcgatga cgagggtgtg ctggatggtg ccggcgttct tgtactgaat
     1201 ggtgacgttc ccggccgcgg cgtggaggtc gctcggcgac agggagaact cgcgggcctc
     1261 gatggaaacc gccgcggcgg tggcggaagg atcggtgccg gcggaggtgg cggtggccgg
     1321 cgtagcggcg gacgaggctg gtttggctgt ggtgcgtccg ccgcctccgc cgcaggcacc
     1381 gagggcgacg gcagccataa tgccaagggc ggcaatggtg gccggtttgg tggtgatgct
     1441 catggtcgtt cctccttgct ggtcgatgac cgcggcctgt accggtctcg ggaaaggggt
     1501 gagcgaggga actcagtcga cgtggagggc gctgaacatt ccgaacatgc cttcggggcc
     1561 ctcggcgtgg gagaggatgt ggcagtggaa cgcccacgtt cccgggttgt cggcgagcac
     1621 gatggcgtcc caccgctcga agggtgcgat ggtgagcgtg tcgcatcgga acggttgggg
     1681 aagcgggtac ccgtcccggg cgaacacctc gtacgtgagc ccgtggaggt gaaccggatg
     1741 ggccatcgct ccatagttca agaagcggaa gcggacgcgt tcaccccgac gggcggcgta
     1801 agccggcgta gccggaaagc ccttgccgtt cacggtgaac ccgccgaggc cgtcgttcag
     1861 gatgaagagg tagtcccgat cggccgccgg ttcggccgcc gtgtcggcgg gctgtaccag
     1921 cagcgctccg acgaggccct tggtgacctg ctcggtcgag ttgtaatgcg agtggtacat
     1981 gtgggtgccg gaaggtccgg gggtgaagtc gtagacgaac gttccacccg gacggatggg
     2041 ttcctgggtc agatatgtga ccccgtccat ggcgttgggg accctttggc cgtgccagtg
     2101 gacggaggtg ctctggtcca gccggttgtg gaccacgacc cgggcgggct gcccctccac
     2161 catccgcaat gtcggaccgg gcacgatccc gttgaaggca agggcttcta cccgctggcc
     2221 cgcagtgacc tcccacgacg tcgcttccgc cgtcaactcg aagacgcgcc gtccgccctc
     2281 catccggaac gctgcatcca cggctccgat cccgctggtg atcggtgcga cacggttgcg
     2341 ctcgaatgcc tccaccccgc cccggtgatg gacgtccatc tcctcggcgg tcgtcgcggt
     2401 ggcccccaca gggtgggccg cggcggggtg ggccatgtcg gccatctctc ccccggaggc
     2461 ttcgccgaca gcgccgccac tgctccggaa gcccgccaga ccggcggcaa tggctgccac
     2521 cccgccgccc gcaccgagca cgccaaggaa ccggcggcga ggcatccgtc tctccgggct
     2581 ggactccgtt tcgccggcga ttggaaagtg gcgcatggcg cacctccgtg aacgcaaaga
     2641 ggccggctgc tcgctgggag cagccggcct cgtggccgtg gatcctggcg gccgtcatga
     2701 gccgcagcag gaggattcgg agcccactgt agccgccgac accgcccttc tcgaaccgtt
     2761 ctatctcgga atggtgcggg tggcgctggt tcttggatgg gtgtcagcca tggtggtcgc
     2821 ggcgggcacc gtccttccgc acctccatca ccgccacatg ttccacggtc cgatcctggc
     2881 cttggccgtc gccgccgcgg ccggcaacag cgtgctcgcc ctactgccgt ggcggcgctg
     2941 gctgggcacc cgccgggcgg ccggtgtcct caccgcctgg gcttcggccg tcgtggcggt
     3001 ggtgaccggc ctggtctatg ccggtggggg gtgggcgtcg gacttctacc tgctgtactt
     3061 cctcgtcatc ccgtttctgg ccgccacgga gccgctccgt cgccaactcg tcctctacgc
     3121 ctccgtcctg gccggttacc tcgtcgctgt cctggccgtg cccggcccgt ccccggtggg
     3181 gctcgtcgcc gtgcgcctga ctgtgctggc atcggcctgt gccgtcggca cctttctggc
     3241 ccaagcggtc caccgcacga ccgcggcgcg ggcccgggcc gaggaggccg ccaggatgga
     3301 gcgcttgctg gccaccgagg ctcaccaccg catcaagaac aatctccagc tcgtcgccga
     3361 cctcctcatc ctcgaagccg accggaccca tcccgatccc tcggccgtcg tggaggagac
     3421 tctcagccgg atccagagcg tggccgccgt gcaccagtcg ctggcccaac ggccagccgg
     3481 ccgggtagcg ctgcggcccg tcatcgaacg gatcgccggg ctggtcggag accggctcgg
     3541 gcgcgtggtc cggatggacg gcgatgacgt cactctcaac gggcgggccg cgacgtggac
     3601 cgccctcgtg gccaacgaac tcgtcgtcaa tgccctccgc cacgggaaag gcgaggtcaa
     3661 cgtcaccgtc acgctccaac cgggaccggc gggcgccttc gcccaactgg ccgtcgagga
     3721 ctgcgggcag ggtccggcgg gcgccgctcc cggcctcggc ctgtccctcg tccggcgact
     3781 cgtggaggaa ggcctcgcgg gcgtgatcac cagcgggctg gacggcggac gttaccgggt
     3841 ggagatccgt tttccaatcg tggaggggga accccatgcg ggtgctcatc gctgaggacg
     3901 accccgtcat cgccctgggg ctcgaagcca aactcgccgc cctcggtcac caggtggtgg
     3961 ccagggtcgc cgacgggcgc cgggcggtcg aggaggccgc ccggacccga ccggacgcag
     4021 tcgtcatgga cgttgtcatg cccg
//
LOCUS       DATGJT010000066         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1252890, whole genome shotgun sequence.
ACCESSION   DATGJT010000066 DATGJT010000000
VERSION     DATGJT010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252890"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VKX24_01125"
     CDS             <1..281
                     /locus_tag="VKX24_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07110.1"
                     /translation="RVHREPFSAQVAQVVGDLASRTGEVFFGRQRPDDQELVMDLLDP
                     SDISEYLGDIPHGEIVFYGLFPLIEDNGVTALSFTPPDADGIVRPQPT"
     gene            325..603
                     /locus_tag="VKX24_01130"
     CDS             325..603
                     /locus_tag="VKX24_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07111.1"
                     /translation="MPDYAAMERYLGRCLALVIRLDGVLPSDSLNLAQELMEHGEPAE
                     GVLQLAWALVETGSQVPSDIVSDIRELTAEVIAEEHMPAGLDDCALDG"
     gene            813..1019
                     /locus_tag="VKX24_01135"
     CDS             813..1019
                     /locus_tag="VKX24_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012854844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ07112.1"
                     /translation="MDKLLMNPREAAEMLSISRSKLYELLAAGTLSSVRIDGCRRISV
                     DVLRDYVDQLRAAEVATPGGVAAA"
     gene            1070..>2065
                     /locus_tag="VKX24_01140"
     CDS             1070..>2065
                     /locus_tag="VKX24_01140"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HLJ07113.1"
                     /translation="MSITARTLKSGRTVYDVRLRDPDGRAYKRAFRTKREAEAFEASQ
                     RTDRVRGAWIDPRKAATTFAELAARWLAGNPAKRPTSLERDEAIIRLHLLPELGPRAV
                     GSITPADVQRVINGWVQRYAPRTVHRHYDVLSAIMTTAVLEDLVARTPCRGIKLPAVR
                     HEDRHIITAEELVALSDALGPDYGLMAYLGAVLGLRQAECAGLRVGRIDFLRGTLTVA
                     EQLTRGRHGSMATGEPKSDAGRRTLSVPPELMALLASHLARRGLDGRHPDAFVFAAPG
                     GAPLDYTNWRRRIWKPATVKAGLEGLTFHDLRRANATGLVAEGVDVKTAQARLGHS"
BASE COUNT          328 a          738 c          668 g          331 t
ORIGIN      
        1 acagagtcca ccgcgaaccg ttctccgctc aggtggcaca agtagtcggc gacttggcga
       61 gccgcaccgg tgaggtgttt ttcggccggc agaggccgga cgaccaggaa ctcgtgatgg
      121 acctgctcga cccctccgat atctcggaat atctgggcga cattccacac ggcgagatcg
      181 tgttctacgg cctgttcccg ctcatcgagg acaacggcgt tacggccctt agcttcactc
      241 cgccagatgc tgacggcatc gtccggcccc aacccactta gatccgggcg tcgcccacca
      301 ccgtgcggac gccacaatgg gcgggtgccc gactacgccg ccatggagcg ttacctaggc
      361 cgatgcctgg ccctcgtcat ccgtcttgac ggggtcctgc cctccgattc cctcaatctg
      421 gcgcaagaac tcatggagca cggtgagccc gccgagggcg tccttcagct cgcctgggcg
      481 ctcgtcgaga ctgggtcaca ggtcccatcc gacatcgtca gcgacattcg agagctgacc
      541 gctgaggtga tcgccgagga gcacatgcca gccggccttg acgattgcgc cctcgacgga
      601 tagcaccaag gtgccggtat agggcggtcc tgcggtctga cgacctcagc tgaagcgcac
      661 ggtatcgccg gcggccgctg ggcggctggg cactgcccgg ccgcacattc ctttcgatgg
      721 acaaaacgcg cgcccccggc atcatcgaca gccgtcgtct tcgtccactt tgaggagtag
      781 gtgcagttcc gacctgggcg gagaggagca tcgtggacaa gttgttgatg aacccgaggg
      841 aggcggccga gatgctctcg atctcgcgct cgaagctcta cgagttgctg gccgccggaa
      901 cactctcgtc cgtcaggatc gacgggtgcc ggagaatctc ggtggatgtt ctgcgggact
      961 acgtcgacca actccgagcc gccgaggtgg cgactcccgg cggggtggcg gcggcctgag
     1021 cgccctaccc tcggtttctt gggctatcgg gcgaggcggg tgacagacga tgagcatcac
     1081 ggccagaacg ctcaagagcg gcaggaccgt ctacgacgtc cgcctccgcg atccggacgg
     1141 ccgggcctac aagcgggctt tccggaccaa gcgggaagcc gaggccttcg aggcgtccca
     1201 gcggaccgac cgggtccgcg gcgcgtggat cgacccccgg aaggcggcca ccaccttcgc
     1261 cgagctggcg gcccggtggc ttgccgggaa cccggccaaa cgcccgacgt cgttggagcg
     1321 agacgaggcg atcatccggc tccacctcct ccccgaactc gggccccgcg ccgtcgggtc
     1381 catcacgcca gccgacgtgc agcgcgtcat caacggctgg gtgcagcgct acgcccctag
     1441 aacggtccac cgccactacg acgtgctgtc ggccatcatg accaccgccg tcctggagga
     1501 cctggtcgct cgcacgccgt gccgggggat caagctcccc gccgtgcgcc atgaggaccg
     1561 ccacatcatt acggccgagg agctcgtcgc cctgtccgac gccctcggtc ccgattacgg
     1621 cctcatggcc tatctcgggg ccgttctcgg cctccgtcag gcggagtgcg ccgggctgcg
     1681 ggtcggccgg atcgacttcc tccgcggcac gctgaccgtc gccgaacagc tcacccgcgg
     1741 acggcatggc tcgatggcca ccggcgaacc gaagtccgac gctggccgcc ggaccctgtc
     1801 ggttccgccg gaactcatgg cgttgcttgc gtctcacctc gcccgccggg ggctcgacgg
     1861 ccgtcacccg gacgcctttg tgttcgctgc cccgggcggc gccccgctcg actacaccaa
     1921 ctggcggcgg cgcatctgga agccggccac ggtcaaggcg ggccttgaag gcctcacctt
     1981 ccatgacctt cgccgggcca atgccaccgg cctcgtggcc gaaggcgtcg acgtgaagac
     2041 cgcccaggcc cgcctgggcc actcc
//
LOCUS       DATGJT010000067         2069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_112165, whole genome shotgun sequence.
ACCESSION   DATGJT010000067 DATGJT010000000
VERSION     DATGJT010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112165"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VKX24_01145"
     CDS             complement(<1..285)
                     /locus_tag="VKX24_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07114.1"
                     /translation="MKVLFVTPRYDPGAIGGAESAARLLAEHLAAEPGFEVAAYSTCA
                     LDHLGWENQLAPGTTTVNGVTLTRFEVAEPRSEDFFKLDDRLRRSPRRVTW"
     gene            complement(282..1310)
                     /locus_tag="VKX24_01150"
     CDS             complement(282..1310)
                     /locus_tag="VKX24_01150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07115.1"
                     /translation="MSDVTSDPAPALGSEDPDAHRRYLAQVMAEIDEEVEHRRNAGDL
                     PPRVERELDELFLRYSPMAGRDGNLDEAIGIVEATGYIDPVVPVLSDKAGGAAIKRTI
                     RQASLWYMGWVTDQVNQFTTATARALRVLDDRVRLLQRQYAERTSPAAPIIELPWAHG
                     PDAWWVQGVLEGLAGRKGRVLHAAAGDGWLVRAMAAEGLDAYGVEPRIGRIDQAEVEG
                     ADLREEPVLDHLKAVLAQTLGGLVLTGVVDGMTAGERDELVRQVTLKLAPGGQLVVHS
                     LSATGWNAPEAPIEADLASGRPLRPETWVGLLERLGFDAAVTDGPDGLDYLVAATAPG
                     HDGRPGGG"
     gene            complement(1307..>2069)
                     /locus_tag="VKX24_01155"
     CDS             complement(1307..>2069)
                     /locus_tag="VKX24_01155"
                     /inference="COORDINATES: protein motif:HMM:NF025877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Wzt carbohydrate-binding domain-containing
                     protein"
                     /protein_id="HLJ07116.1"
                     /translation="DVLVIDEVLAVGDERFQRKCLDRIRQFQIEGRTIIFVTHSPDQV
                     RSICTKAVVLNDGQVIAYGAPGEAIRTFRENLLEAGDALAATLAPAPEEPQVVAVGES
                     GSSHPVRVTGVSFAHPGSADRPYVVTGEPLVVSVHFTADTPTTTLSFVVELRDDLGRT
                     LVRSVSGDLGEPLAVAAGAGTVSFRYPSVPFADGAYDVSVGIEHRAGGEWDDWKESVA
                     KIEVMNPTKSQGLVDLPATVTLEQEGAWLGPAVAR"
BASE COUNT          263 a          765 c          765 g          276 t
ORIGIN      
        1 ccaggtcacc cggcggggcg agcggcgcag gcggtcgtcg agcttgaaga agtcctcgct
       61 gcggggctcg gcgacctcga agcgggtcag cgtcacgccg ttcaccgtcg tcgtccccgg
      121 cgccagctgg ttctcccagc ccaggtggtc cagggcgcag gtcgaatagg ccgccacctc
      181 gaacccgggc tcggccgcca ggtgctcggc gaggagccgg gccgccgact cggccccgcc
      241 gatggcaccc gggtcgtaac ggggggtgac gaagaggacc ttcatccgcc cccgggccga
      301 ccgtcgtgcc ccggcgcggt cgccgcgacg agatagtcga gcccgtcggg cccgtcggtg
      361 accgcggcgt cgaagcccag gcgctcgagg aggccgaccc aggtctccgg gcggaggggg
      421 cggcccgagg ccaggtcggc ctcgatgggg gcctcgggcg cgttccagcc ggtggccgag
      481 agggagtgga cgaccagttg gccccccggg gcgagcttga gcgtgacctg ccggacgagc
      541 tcgtcgcgct cgcctgcggt catcccgtcg accaccccgg tcagcacgag gccgccgagc
      601 gtctgggcca ggaccgcctt caggtggtcg agcaccggct cctcccggag gtcggcgccc
      661 tcgacctcgg cctggtcgat ccgcccgatc cggggctcga ccccgtaggc gtcgaggccc
      721 tcggccgcca tcgcccgcac cagccagccg tccccggcgg cggcgtggag gacccgaccc
      781 ttccgcccgg ccagaccctc gaggacgccc tgcacccacc acgcgtcggg gccgtgggcc
      841 cagggaagct cgatgatggg cgccgcgggg ctcgtccgct cggcgtactg gcgctgcagg
      901 aggcgcaccc ggtcgtcgag cacccgcagg gcgcgggcgg tggccgtcgt gaactggttg
      961 acctggtcgg tgacccaccc catgtaccag aggctcgcct ggcggatcgt ccgcttgatc
     1021 gccgccccgc ccgccttgtc ggagaggacc gggaccaccg ggtcgatgta gccggtcgcc
     1081 tccacgatgc cgatggcctc gtcgaggttg ccgtcgcgcc ccgccatcgg cgagtaccgc
     1141 aggaacagct cgtcgagctc gcgctcgacc ctgggcggga ggtcgccggc gttgcgacgg
     1201 tgctccacct cctcgtcgat ctcggccatg acctgggcca ggtaacggcg gtgggcatcg
     1261 gggtcctcgg agcccagagc gggcgccggg tcgctcgtga cgtcgctcac cgggccacgg
     1321 ccggcccgag ccaggccccc tcctgctcga gggtgacggt cgccggcagg tcgaccagtc
     1381 cctggctctt cgtcgggttc atcacctcga tcttggccac gctctccttc cagtcgtccc
     1441 actcgccgcc ggcccggtgc tcgatgccga ccgacacgtc gtaggcgccg tcggcgaagg
     1501 gcaccgacgg gtaccggaag gagaccgtgc ccgcgccggc ggcgacggcc aggggctcgc
     1561 cgaggtcccc gctcaccgag cgcacgagcg tgcgcccgag gtcgtcgcgg agctcgacga
     1621 cgaaggagag ggtcgtggtc ggggtgtccg cggtgaagtg cacgctcacg accaggggct
     1681 cccccgtcac cacgtagggg cggtcggcgc tgcccgggtg ggcgaagctc accccggtca
     1741 cccggacggg gtgcgagctg cccgactccc ccaccgccac cacctggggc tcctcggggg
     1801 cgggagcgag ggtcgccgcc agcgcgtcgc ccgcctcgag caggttctcc cggaaggtcc
     1861 ggatcgcctc gcccggcgcg ccgtaggcga tcacctggcc gtcgttcagg acgacggcct
     1921 tggtgcagat cgagcggacc tggtccggcg agtgggtgac gaagatgatc gtgcgcccct
     1981 cgatctggaa ctggcggatg cggtccaggc acttgcgctg gaagcgctcg tcgccaacgg
     2041 ccagcacctc gtcgatgacg aggacgtcg
//
LOCUS       DATGJT010000068         4440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_9023,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000068 DATGJT010000000
VERSION     DATGJT010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9023"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VKX24_01160"
     CDS             complement(<1..567)
                     /locus_tag="VKX24_01160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLJ07117.1"
                     /translation="MPKVAAERPPAVEVAAFRADELLHLYEGTAGDVTAVVSYGLFAY
                     VSPSCWATLGWDPRELVGRPFVDFVHPEDVPNFTDARRAALRSTTPCVATFRLRRRDG
                     AYLWAESVLGQIANPRPRGEILLKASIRDVSARRLVEVELQRQALTDPLTGVANRTVF
                     MDRLDQALRRLQRSDTVVAVIYLDLDRFK"
     gene            845..1639
                     /locus_tag="VKX24_01165"
     CDS             845..1639
                     /locus_tag="VKX24_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012921664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF and ANTAR domain-containing protein"
                     /protein_id="HLJ07118.1"
                     /translation="MQVGHGASGGRDGDREAWLAAALVELADTLVADFDMVEFLQLLA
                     RRCVEVFGAVEAGLMLADPGGTLRYMASSSERAKILELFELQSEEGPCLDCFRSGEQV
                     VNRRLTDPAGRWPRFSVKARAAGFVSAHALPLRVRGTVIGAINLFHATDHQLGAADVR
                     LGQAMADIATIGILQARALSQATVLAEQLQVALGSRIVLEQAKGRLAERVGVDLDEAF
                     RRLRAFSRSHNRGLTSVAEAFLAGDVGAGELTEGVAVRARPVRGGA"
     gene            1754..2533
                     /locus_tag="VKX24_01170"
     CDS             1754..2533
                     /locus_tag="VKX24_01170"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF and ANTAR domain-containing protein"
                     /protein_id="HLJ07119.1"
                     /translation="MDPFESAGEGLGPEERPAAGGSGQPADLARGLLRVAAIPANREV
                     LDAALRLVVALARVTVCGADGVSVCLVRHGALTTVAASDDTVSGMDRDQYATGEGPCV
                     SAAAEGHWFHVRSLDEERRWPAFIPRAKERGINSILSTPLRSAAEPVGALNIYSRHTA
                     AFAAPELDLASLFAVQASELLVKAAVDVSVEELSRQLQDALRGRDLISQARGVLMERH
                     GVTADAAYSTLRRSSRQHSTTLRGQAEDIVTSTQPPAGDGR"
     gene            2533..2772
                     /locus_tag="VKX24_01175"
     CDS             2533..2772
                     /locus_tag="VKX24_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07120.1"
                     /translation="MPEDLTDTLDRARQDAMLSIGALWVRYFGLGGMGTALELEAYLF
                     GALRPTAHEYDVLAQTLNERFDELGADRTIPYSDD"
     gene            complement(3148..3930)
                     /locus_tag="VKX24_01180"
     CDS             complement(3148..3930)
                     /locus_tag="VKX24_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020647522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HLJ07121.1"
                     /translation="MTIATDVLTSEWTKIRSVRSTYWTLFAAAATTIGLSAIVCAVYV
                     AQYDHLTAKDKVGFNPASMSLTGGILAQLAIAVLGVLVITGEYGSGMIRSTFAAVPQR
                     LTVLAAKATVFTAVTVAVTTTACFAAFFIGQGILSAKGIGVSLGSPEALRTVVGTGLY
                     LAILGLLALGLGTLIRKTAGAITAVVGILFVLPVLSQLLPSSMDAIRKYLPSNAGQAI
                     VTGGSTARGGTTLSPWLGLGVFFLYAAAALGAAAFTLVRRDA"
     gene            complement(3933..>4440)
                     /locus_tag="VKX24_01185"
     CDS             complement(3933..>4440)
                     /locus_tag="VKX24_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018521168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07122.1"
                     /translation="ALLGDPELLIFDEPVNGLDPEGIVWIRNLMRSLAAEGRTVFVSS
                     HLMAEMALTADHVIVIGKGRLLAEASVEDLIHNSAQNFVRVRSDQKDKLAGLLGARGG
                     SSHAESDGALAVTGLSAAAIGDLAAAVGIVLHELSPQEASLEEAYLDLTRDSVEYQAA
                     VPPAGKVA"
BASE COUNT          633 a         1482 c         1671 g          654 t
ORIGIN      
        1 cttgaaccgg tcgaggtcga ggtagatgac cgccaccacg gtgtcggacc gttgcagccg
       61 ccggagggcc tggtcgagac ggtccatgaa caccgtccgg ttggcgacgc cggtgagcgg
      121 atcggtgagc gcctggcgtt ggagctcgac ctccaccagc ctccgcgccg agacgtcgcg
      181 gatcgaggcc ttcaggagga tctccccccg gggccggggg ttggcgatct ggcccaggac
      241 gctctcggcc cacaggtagg cgccgtcgcg gcgccgcagg cgaaaggtgg ccacgcaggg
      301 cgtggtggac cgcagggccg cccggcgagc gtcggtgaag ttcgggacgt cctcgggatg
      361 cacgaagtcg acgaacggcc ggcccaccag ctcccgcggg tcccatccca gcgtcgccca
      421 gcaggacggc gacacgtagg cgaagaggcc gtaggacacg acggcggtga cgtcacccgc
      481 cgtgccctcg tagaggtgca gcagctcgtc ggcgcggaat gccgccacct cgactgccgg
      541 cggtcgttcg gctgcaacct tcggcatgcg gagctccctg ggtcaggctc gagcgcatcg
      601 ccagggtctg gggcaatacc ggcacgggca ccatcgggcc gacatggcgc acgcgtgttc
      661 cagtctaccc acgatcgagg cccgacccgc ccgcctccgt cccgcagtcc gtgtccggtc
      721 ccggcccgcg cggccggcgg ctcctgctag cgtttgaagc tcgtgcgccg gggtacccgg
      781 tggacgagcg tgccgctcca gaccctggtg gccgaaccag attcgttgat ccggggaggc
      841 gcaggtgcag gtcggacatg gtgcgtcagg cgggcgggat ggggaccgtg aggcgtggct
      901 ggcggcggcg ttggtggagt tggccgacac gttggtcgcc gatttcgaca tggtggagtt
      961 cctgcagttg ctggcccggc gctgtgtcga ggtgttcggc gcggtggagg ccggcttgat
     1021 gctggccgat ccggggggga cgttgcgcta catggcgtcg tcgtcggagc gggcgaagat
     1081 cctggagctc ttcgagctcc agagcgagga agggccgtgc ctggactgct tccggagcgg
     1141 ggagcaggtg gtgaaccgcc ggttgacgga tcctgcgggg cggtggccgc ggttttcggt
     1201 caaggcgcgg gcggcggggt tcgtgtccgc ccatgcgttg ccgttgcggg tgcggggcac
     1261 cgtgatcggg gcgatcaacc tgttccatgc caccgaccat cagctcggcg cggcggacgt
     1321 gcggttgggg caggcgatgg ccgacatcgc cacgatcggg atcctccagg cccgggcctt
     1381 gagccaggcc acggtgctgg ccgagcagct ccaggtggcg ctggggagcc ggatcgtcct
     1441 ggagcaggcc aagggacggt tggcggagcg tgtcggggtc gatctcgacg aggccttccg
     1501 gcggctgcgg gcgttttccc ggagtcacaa ccgggggttg acctcggtgg cggaggcgtt
     1561 cctggccggc gatgtcggcg ccggggagct gaccgagggg gtggcggttc gggcccggcc
     1621 ggtgcggggc ggcgcctgac gccgcccggg tgtagcgtcg gggaggcgtt gacaggcccc
     1681 gcctgtcgac accggcgcca ctccggaccc tggtgcgccc ccgagtgctg gtgaccaggg
     1741 aggcggcgtg ggcatggatc cgttcgaatc cgccggcgag ggactgggac cggaggaacg
     1801 cccggcggcg ggggggagcg ggcaaccggc cgacctggcc cggggtctgc tgcgggtggc
     1861 ggccatcccg gccaaccggg aggtgctcga cgcggccttg cggctcgtgg tggcgctggc
     1921 gcgggtcacg gtgtgcggcg ccgacggggt cagtgtgtgc ctggtccgcc acggcgcgct
     1981 caccaccgtg gcggccagtg acgacaccgt cagcggcatg gaccgggacc agtacgccac
     2041 cggggaggga ccgtgtgtgt ccgccgccgc cgagggccac tggttccacg tccggtccct
     2101 cgacgaggag cggcgctggc cggcgttcat cccccgggcc aaggagcggg gcatcaacag
     2161 catcctctcg accccgctgc ggagcgcggc ggagcccgtc ggggcgctga acatctactc
     2221 ccgccacacc gcggcgttcg ccgccccgga gctggacctg gcgtcactgt tcgccgtgca
     2281 ggcttccgag ctcctcgtca aagcggccgt cgacgtctcg gtggaggaac tcagccgtca
     2341 gctccaggat gccctccggg gccgggacct catctcccag gcccggggag tcctgatgga
     2401 acgccacggc gtcaccgccg acgccgccta ctccaccctg cgccgttcct cccgccagca
     2461 cagcaccacg ctgcggggcc aggccgaaga catcgtcacc tcgacccagc cgccggccgg
     2521 tgacggccgt tgatgcccga ggacctcacc gacaccctcg accgggcccg ccaggacgcc
     2581 atgctgtcga tcggcgccct ctgggtgcgc tacttcggtc tcggcggcat gggaaccgcc
     2641 ttggaactcg aggcctacct cttcggcgcc ctccggccca ccgcccacga atacgacgtc
     2701 ctcgcccaga ccctcaacga acgcttcgac gaactcggcg ccgaccggac catcccttac
     2761 tccgacgact aggttggaag tcccggacga cgtgccgccc cgaatcggcg tggaaggcgc
     2821 gacctcgccg aaccccctcg acgttgaagg agtccggcgg aggggaggcc acgcggtcgc
     2881 agcgttcagg ccgtgtccgt cgatggggca gggtgcggac aggcggagac gctctggggt
     2941 ctgatccgaa tgacgtccag cttcgcctcc tccgtcctca ggagcggctg gttggccgtc
     3001 gtcccttcgc cctttaccat gcgcccctgc cggaacccgg tctatggccc gttggagcca
     3061 tttgtgtgac catgcggaca ccgatcggga aatgactggt ggctgcggag cccactgctc
     3121 cgggccgtcg tcgagcttgt ggggggctca ggcatcgcgg cgcacgagcg tgaaggcggc
     3181 cgcgccgagg gcggcggcgg cgtagaggaa gaacaccccc aaccccagcc agggtgacag
     3241 cgttgtcccg ccgcgggcgg tcgaaccgcc cgtgacgatg gcctggccgg cgttgctggg
     3301 caggtacttc cggatggcgt ccatcgacga cgggagcagc tgggacagca ccgggaggac
     3361 gaagaggatg ccgaccaccg cggtgatggc cccggcagtc ttgcggatga gggtgccgag
     3421 accgagcgcc aggagcccga ggatggcgag gtacaggccg gtgccgacga ccgtgcggag
     3481 cgcctcgggc gacccgaggc tgacaccgat gcccttggcc gagaggatcc cctggccgat
     3541 gaagaaggcg gcgaagcagg ccgtggtggt cacggcgacg gtcacggcgg tgaacaccgt
     3601 cgctttggcg gcgaggaccg tgagccgttg cggcacggca gcgaacgtgg accggatcat
     3661 gccgctgcca tattcgccgg tgatgacgag gaccccgagg acggcgatgg ccagctgggc
     3721 caggatcccc ccggtcaggc tcatcgacgc cgggttgaag ccgaccttgt ccttcgccgt
     3781 caggtggtcg tactgggcga cgtagacggc gcacacgatg gccgagagcc cgatcgtggt
     3841 ggcggcggcg gcgaagagcg tccagtaggt cgagcggacg ctgcggatct tggtccactc
     3901 ggacgtcagg acgtcggtgg cgatcgtcat ggtcaggcca ccttcccggc cggtggtacg
     3961 gcggcctggt attcgacgct gtcccgggtc aggtccaggt acgcctcctc cagcgaggcc
     4021 tcctgggggg agagttcgtg gagcacgatg cccactgcgg cggccaggtc cccgatggcc
     4081 gccgccgaca ggccggtgac ggcgagtgcg ccgtcggact cggcatggct cgacccgccc
     4141 cgggcgccga gcagcccggc cagtttgtcc ttctggtccg agcggacccg gacgaagttc
     4201 tgggcactgt tgtggatgag gtcctcgacg ctggcctcgg ccagcaggcg gcccttcccg
     4261 atcacaatga cgtgatcggc cgtcagggcc atctccgcca tcaggtggct ggagacgaag
     4321 acggtccgtc cctcggcggc cagcgaacgc atcaggttgc ggatccacac gatcccttcg
     4381 ggatcgaggc cgttcaccgg ctcgtcgaag atcaacagct ccgggtcgcc cagcagggcg
//
LOCUS       DATGJT010000069         2140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_112487, whole genome shotgun sequence.
ACCESSION   DATGJT010000069 DATGJT010000000
VERSION     DATGJT010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112487"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VKX24_01190"
     CDS             <1..337
                     /locus_tag="VKX24_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010350648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07123.1"
                     /translation="DVLLRSVQAVASGRSLLDPEVTAKVLERLRAGPAGGRDGEPPLT
                     DREQEILRLIADGATNREIGERLYLAEKTVRNYVSGLLAKLGVQRRSEAAAYAARRAI
                     RGRPQATGQ"
     gene            complement(319..>2140)
                     /locus_tag="VKX24_01195"
     CDS             complement(319..>2140)
                     /locus_tag="VKX24_01195"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ07124.1"
                     /translation="DGPAEAAAMAVLLLIVLRQVLTLRENFALVRNLEERVESRTSEL
                     RRGEERFRSLVQNSSDVVTIADADGTIRYLSPSVRRVFGYEYRDLLGTSLAALIAPKQ
                     RGDFREALWQSAVEPGGPTVGEFLVVDSGGRVRPAEITITNLIDDPNVGGLVLNTRDI
                     GDQKRLQDELSHQAFHDSLTGLANRALFKDRVEHALLRTRRRRRPLAVLFLDLDRFKA
                     INDSFGHASGDALLTAVSQRLSGCVRAEDTVARLGGDEFAVLVENLAGDAELELVAER
                     IRDTFREPIVIDGRELVVAASVGIALSHTGDETADDLLRNADLAMYRAKSGGGGARLY
                     HPEMHAGIIERLELESDLRHALAREELYLVYQPIVDLATGRVSGAEALLRWQHPVRGV
                     VSPAEFIPVAESTGLIVPIGEWVLRQACRDARRWSDLPGGEQLSVSVNLSGRQLQTSE
                     LASVVPQALLEAGLAPERLMLEMTESVMIDGDDETLAVLHELRRLGLRLGLDDFGTGY
                     SSLSYLHRFPIDVIKIDRSFVERLTGEGDEASLADSIVRIAHGLRVTTVAEGIEDRAQ
                     LRALQTMGCDHGQGYHFARPMSGADFERYIAGTGSYCPVA"
BASE COUNT          294 a          754 c          806 g          286 t
ORIGIN      
        1 cgacgtcctc ctccggtcgg tccaggccgt ggcgtcgggc cggtcgctgc tcgaccccga
       61 ggtgaccgcc aaggtcctcg agcgcctccg ggccggcccg gccgggggac gggacggcga
      121 gccgcccctc accgaccggg aacaggagat cctgcggctg atcgccgacg gcgccaccaa
      181 ccgggagatc ggggaacggc tctacctggc cgagaagacc gtccggaact acgtctcggg
      241 gctgctggcc aagctcggcg tgcaacgccg cagcgaagcg gcggcctacg ccgcccgccg
      301 ggccatcagg gggcgccctc aggcgaccgg gcagtagctg ccggtcccgg cgatgtagcg
      361 ctcgaaatcc gcgcccgaca tcggccgggc gaagtggtag ccctggccgt ggtcgcagcc
      421 catcgtctgc agcgcccgga gctgggcgcg gtcctcgatg ccctcggcca ccgtcgtcac
      481 ccgcaggccg tgggcgatcc ggacgatgga gtcggccagg ctcgcctcgt cgccctcgcc
      541 ggtgagccgc tcgacgaacg accggtcgat cttgatcacg tcgatcggga agcggtgcag
      601 gtagctgagc gacgagtaac ccgtcccgaa gtcgtcgagg ccgagccgca acccgaggcg
      661 acgcagctcg tggagcacgg ccagggtctc gtcgtcgccg tcgatcatga ccgactcggt
      721 catctccagc atgagccgct ccggcgccag cccggcttcg aggagcgcct ggggcacgac
      781 cgacgccagc tcgctggtct ggagctggcg gccggagagg ttcacgctca ccgacagctg
      841 ctccccgccg gggaggtcgc tccaccgccg ggcgtcgcgg caggcctggc ggagcaccca
      901 ctcgccgatg gggacgatca gcccggtgct ctcggcgacg gggatgaact cggccggcga
      961 gacgacgccc cggacggggt gctgccaccg cagcagggcc tcggcgcccg acacccggcc
     1021 cgtggccagg tcgacgatcg gctggtagac gaggtacagc tcctcccgcg ccagggcgtg
     1081 gcggaggtcg ctctccagct cgaggcgctc gatgatcccg gcgtgcatct cggggtggta
     1141 caggcgggcg ccgcccccgc cggacttggc ccggtacatg gccaggtcgg cgttgcggag
     1201 gaggtcgtcg gcggtctcgt cgccggtgtg ggacagggcg atcccgacgc tggccgccac
     1261 caccagctcc cggccgtcga tcacgatcgg ctcccggaag gtgtccctga tccgttcggc
     1321 cacgagctcg agctcggcgt cgccggccag gttctcgacc agcacggcga actcatcgcc
     1381 gccgaggcgg gcgacggtgt cctcggcccg gacgcagccc gacaggcgct ggctgacggc
     1441 ggtgaggagg gcgtcgcccg aggcgtggcc gaagctgtcg ttgatggcct tgaaccggtc
     1501 gaggtcgagg aacagcacgg ccagcgggcg gcgccggcgg cgggtgcgca ggagggcgtg
     1561 ctcgacgcgg tccttgaaca gcgcccggtt ggccaggccg gtgagcgagt cgtggaacgc
     1621 ctggtggctc agctcgtcct gcagccgctt ctggtcgccg atgtcgcggg tgttgaggac
     1681 gagcccgccg acgttgggat cgtcgatcag gttggtgatg gtgatctccg ccggccggac
     1741 ccggcccccg ctgtcgacga cgaggaactc gcccaccgtg gggccgccgg gctcgacggc
     1801 gctctgccac agcgcctccc ggaagtcgcc ccgctgcttc ggggcgatga gggcggcgag
     1861 cgacgtgccg agcaggtcgc ggtactcgta gccgaacacc cgccggacgg acgggctgag
     1921 gtaccggatg gtgccgtcgg cgtcggcgat ggtgacgacg tcggaggagt tctgcactag
     1981 cgagcggaac cgctcctcgc cccggcgcag ctcgctggtg cggctctcca cccgctcctc
     2041 gaggttgcgg acgagggcga agttctcccg cagcgtcagg acctgccgca ggacgatgag
     2101 gaggaggacg gccatggccg cggcctcggc cggcccgtcg
//
LOCUS       DATGJT010000070         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1149574, whole genome shotgun sequence.
ACCESSION   DATGJT010000070 DATGJT010000000
VERSION     DATGJT010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149574"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VKX24_01200"
     CDS             <1..277
                     /locus_tag="VKX24_01200"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ07125.1"
                     /translation="NYAAAKAGLVGFTKSIAREVAKHGVTANVVVPGLVDTAMTAGLS
                     PAQREKLVERVPVGRPGRAEEIAEAVRFCARDPYLTGAAIAIDGGLI"
     gene            429..683
                     /locus_tag="VKX24_01205"
     CDS             429..683
                     /locus_tag="VKX24_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017319975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000035 - acyl binding [Evidence IEA];
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HLJ07126.1"
                     /translation="MSNNQEILDALREVLVDRLKVEPEAVTPEANLFDDLGLDSIDLM
                     SAVMAIEERFEIEVSDAELENVTTVGEAVDLLGGKVSAGA"
     gene            676..1923
                     /gene="fabF"
                     /locus_tag="VKX24_01210"
     CDS             676..1923
                     /gene="fabF"
                     /locus_tag="VKX24_01210"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012032899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HLJ07127.1"
                     /translation="MPEPSSGRRRIAVTGIGPVTPIGTGVEEFWSALIAGRSGAGPIT
                     RFDATDFKSKIAAEVKDFDIGTYLPPARARRMDRFSQLAYAAAALALADAGMKPTDPD
                     PARVGMVIGSGIGGIGLWEEEHTLMLKRGPRFVSPSLIAMMIPNAAAGSLAIEFGFTG
                     PNECTVTACASSGHAMARAMDYIRYGAADVVVVGGAESCISPMSVASFCAARALSTRN
                     DDPLHASRPFDATRDGFVIGEAATCLVFESMEHARGRGAHVLAEAIGYGLSSDAYHMV
                     ASHPDGAGASSAMIAALADAQIAPGEVGYINAHATSTNVGDASEAKAVRKVFGSSPPP
                     TSATKSMTGHLLGAAAATEAAACVLAMNRGMLPPTINYETPDPECDLDVIPNQARAAD
                     VEVTMCNSFGFGGHNVAVLFGRA"
     gene            2032..2391
                     /locus_tag="VKX24_01215"
     CDS             2032..2391
                     /locus_tag="VKX24_01215"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011420557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HLJ07128.1"
                     /translation="MISTGIDVVDIARFEAALARWPRLAERLFTAGERGYAASRPRPA
                     ESLAARFAAKEAAMKALGAGWPRISWLEIEVLRGEGRPSLVLTGRAAELAAGGRCSVS
                     LAHDGGVAVASVILESA"
BASE COUNT          348 a          817 c          874 g          357 t
ORIGIN      
        1 gaactacgcc gccgccaagg ccgggctggt cgggttcacc aagtcgatcg cccgggaagt
       61 cgccaagcac ggcgtcaccg ccaatgtcgt tgtacccggt ttggtcgaca cggcaatgac
      121 cgccggtctc agcccggcgc agcgggagaa gctggtcgag cgggtaccgg tcggccgtcc
      181 ggggagggct gaggagatcg ccgaggcggt ccgcttctgc gcccgggacc cctacctgac
      241 cggagcagcg atcgccatcg acgggggcct gatatgagcc cgctcgttga gactgtttcc
      301 aggaactggg gattgaatgt ggtagaagag ccgggatcgg gcctcgccgg aggcagcatc
      361 caaccgaggc cggtggcggg ctgcacgcac cgatcgaact gattcagaac acgggaggga
      421 gaaaagcgat gtcgaacaac caagagatcc tggatgcgct gcgtgaggtg ctggtcgacc
      481 gcctgaaggt cgagccggag gcggtgacac cggaggcgaa cctgttcgac gaccttgggc
      541 tcgactcgat cgacctgatg agcgcggtca tggccatcga ggaacggttc gagatcgagg
      601 tctccgatgc cgagctcgag aacgtcacga ccgtgggcga ggcggtggac ctgctggggg
      661 ggaaggtctc cgccggtgcc tgagccgtca tccggtaggc gccggattgc ggtgacgggc
      721 atcgggcccg tcacgccgat cggcaccggg gtcgaggagt tctggtcggc gctgatcgcc
      781 ggccgctccg gcgccgggcc gatcacccgc ttcgatgcca ccgacttcaa gtcgaagatc
      841 gccgccgagg tcaaggactt cgacatcggc acctaccttc ctcccgcccg ggctcggcgc
      901 atggaccgct tctcgcagct ggcctacgcc gccgccgccc tcgccctggc cgacgccggc
      961 atgaagccga ccgaccccga ccccgcccgg gtgggcatgg tgatcgggag cggcatcggc
     1021 gggatcgggc tgtgggagga ggagcacacg ctgatgctga agcgcgggcc gcgcttcgtc
     1081 agcccctcgc tgatcgccat gatgatcccg aacgccgccg ccggctcgct ggcgatcgag
     1141 ttcggcttca ctggcccgaa cgagtgcacg gtcacggcct gcgcctcgag cggccacgcc
     1201 atggctcggg cgatggacta catccgctac ggagctgccg acgtcgtcgt cgtcgggggg
     1261 gcggagtcgt gcatctcacc gatgtcggtg gcctcgttct gcgccgcccg ggcgctgtcg
     1321 acccgcaacg acgatccgct ccacgcctcg cggccattcg acgccacccg ggacggcttc
     1381 gtcatcggcg aggcggccac ctgcctggtc ttcgagtcga tggagcacgc ccgggggcgt
     1441 ggcgcccacg tcctggccga ggcgatcggc tacgggttgt cctccgacgc ctaccacatg
     1501 gtggcgtcgc acccggacgg tgccggcgcc agctcggcga tgatcgccgc cctcgccgac
     1561 gcccagatcg ccccgggcga ggtcgggtac atcaatgccc acgccacgtc gacgaacgtc
     1621 ggcgacgcat cggaggccaa ggccgtgcgc aaggtcttcg gcagctctcc tccgccgacc
     1681 tcggcgacca agtcgatgac cgggcacctg ctgggggccg cggcggcgac cgaggcggcc
     1741 gcctgcgtgc tggcgatgaa ccgagggatg ctgcccccga cgatcaacta cgagacaccg
     1801 gaccccgagt gcgacctcga cgtcatcccc aaccaggccc gtgccgccga tgtcgaggtg
     1861 acgatgtgca actcgttcgg cttcgggggc cacaacgtcg cagtcctgtt cgggcgggcc
     1921 tagcccccgc gcgccggtgc ctggccggat cccggcgccg gcgtgatcgc tgggccggcg
     1981 taatctccgg tgcctgcgtg atccgggcac cggcgtgacc ggggtgccgg cgtgatctcc
     2041 accggaatcg acgtcgtcga catcgcccgc ttcgaagctg ccctggcccg ctggccgcgg
     2101 ctcgccgagc ggctgttcac cgccggtgag cgggggtacg ccgcatcgcg gccgaggccg
     2161 gccgagtcgc tggcggcccg gttcgccgcc aaggaggcgg cgatgaaggc gctgggggcc
     2221 ggttggccga ggatctcgtg gctggagatc gaggttctcc ggggcgaggg ccgcccttcg
     2281 ttggtgctga ccgggcgggc ggccgagctg gccgccggtg gccgctgctc ggtgtccctg
     2341 gcccacgacg ggggcgtggc ggttgccagc gtgatcctgg agtcagctta gaccgg
//
LOCUS       DATGJT010000071         2959 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1357395, whole genome shotgun sequence.
ACCESSION   DATGJT010000071 DATGJT010000000
VERSION     DATGJT010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1357395"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VKX24_01220"
     CDS             complement(<1..257)
                     /locus_tag="VKX24_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HLJ07129.1"
                     /translation="MPALIAVDAGTTGVRAFAVDGEGRPLGFAYRELTQHFPRPGWVE
                     HDADEIWAAVQATLRELAGRLAGDGVGPVAAVGITNQRETVV"
     gene            314..1342
                     /locus_tag="VKX24_01225"
     CDS             314..1342
                     /locus_tag="VKX24_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020115266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HLJ07130.1"
                     /translation="MRIGMLTGGGDCPGLNAVIRAVVRKGEGVYGHNLIGFRHGWRGV
                     VECQTVDLTVGTTRGILHRGGTILGTSRTNPYRTDDGVRRVLDTLKRERVDALVAIGG
                     EDTLGVASQLTDDGVRIVGVPKTIDNDLSATDFTFGFDTAVQIATDAIDRLHTTAESH
                     DRVMVCEVMGRHAGWIATFAGMAGGADVILIPEEPFDVDDVCERIRHRHLRGARFSIV
                     VVAEGAVPKEGTMVTQEAEVDQFGHVRLGGIGNLLQGEIEGRTGFETRVTILGHIQRG
                     GTPTAYDRVLATRFGIEAIDAVHQQDFGTMVALRGPDIVRVPLADAVRELKTVDHRIY
                     DAASVFFG"
     gene            1339..2205
                     /locus_tag="VKX24_01230"
     CDS             1339..2205
                     /locus_tag="VKX24_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010306851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HLJ07131.1"
                     /translation="MNVLEDLIHLLDLEPLEVNLFRGVSWKDERPRVFGGQVAGQALV
                     AAGRTVDDGKGVHSLHAYFLRPGDPTIPIVYEVDRIRDGKSFTTRRVVAIQRGEAIFN
                     LQASFHRAEDGFDHQVTMPEAPAPESLPRADEMEPPRPGRLWERQPVDIRYVDGPPWD
                     REPSDSGRQLVWIRADGTLPDDPLLHVCIVTYASDYTLLGSSLVPHGVSYWRDDVMMA
                     SLDHAMWFHRPFRADEWLLYSQTSPSASGARGLAYGGIFRRDGTLVVSVVQEGLIRPI
                     VDPAKLSRMYKS"
     gene            2223..>2959
                     /locus_tag="VKX24_01235"
     CDS             2223..>2959
                     /locus_tag="VKX24_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013495655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HLJ07132.1"
                     /translation="MPSPDGRVDLRSDTVTTPTPAMRRAMAEAEVGDDVYGEDPTVNR
                     LEELAAARVGKEAALYLPSGTMGNQVALRVLTRPGTEVLCAARAHIRQYEAAAAARNA
                     GVQVRPLHDREGTFEADAVDAACQGPAHHLPPLSLVAIENTHMPAGGVPWPPARVEAV
                     AAAARRHGLPVHCDGARLFNAAVALGVGAPVLAAPVDTVMFCLSKGLSAPVGSMLAGS
                     ADVIAAAREERARLGGGMRQAGVIAAAG"
BASE COUNT          411 a         1107 c         1056 g          385 t
ORIGIN      
        1 acgacggtct cccgctggtt ggtgatgccg acggcggcca ccggaccgac gccgtcgccg
       61 gccagccgcc cggccagttc ccgaagcgtc gcctgcaccg cggcccagat ctcgtcggcg
      121 tcgtgctcga cccagcccgg ccgggggaag tgctgcgtca gctcccggta ggcgaagccg
      181 agcggccggc cctcgccgtc gacggcgaag gcccggaccc cggtcgtccc cgcatcgacg
      241 gcgatgagag cgggcataag ctgcgccgca ggctacctgc gggtacggcg aagaggcgga
      301 ggagcttcga acgatgcgga tcggcatgct gacgggcggc ggcgactgtc ccggcctcaa
      361 cgccgtgatc cgggcggtcg tccggaaggg cgagggtgtc tacggccaca acctcatcgg
      421 gttccggcac ggctggcggg gcgtggtcga gtgccagacc gtcgacctca ccgtcggcac
      481 gacgaggggc atcctccacc ggggcggcac gatcctcggc acgtcccgca ccaatcccta
      541 caggaccgac gacggcgtac gccgggtgct cgataccctc aagcgggaac gggtcgacgc
      601 cctggtggcc atcggcggcg aggacacgct cggcgtggcc agccagctca ccgacgacgg
      661 cgtccgcatc gtcggggtgc cgaagaccat cgacaacgac ctctcggcca cggacttcac
      721 cttcgggttc gacaccgccg tccagatcgc caccgacgcc atcgaccgcc tccacaccac
      781 ggctgagtcc cacgaccggg tcatggtctg cgaggtgatg ggccgccacg ccggctggat
      841 cgccaccttc gccgggatgg ccggcggcgc cgacgtcatc ctcatccccg aggagccgtt
      901 cgacgtcgac gacgtctgcg agcggatccg ccaccgccac ctccgggggg cccgcttctc
      961 gatcgtggtg gtggccgagg gggcggtgcc caaggagggg acgatggtca cccaggaggc
     1021 ggaggtcgac cagttcggcc acgtccgcct cggcggcatc ggcaacctcc tgcagggcga
     1081 gatcgagggc cggacgggct tcgagacgcg ggtgacgatc ctcggccaca tccagcgggg
     1141 cgggacgccg acggcctacg accgggtcct ggccacccgc ttcggcatcg aggccatcga
     1201 cgccgtccac cagcaggact tcgggaccat ggtggccctc cggggccccg acatcgtccg
     1261 ggtgccgctg gccgacgccg tccgcgagct gaagacggtg gaccaccgca tctacgacgc
     1321 ggccagcgtg ttcttcggtt gaacgtcctc gaggacctca tccacctcct cgacctcgag
     1381 ccgctggagg tcaatctctt ccggggcgtg agctggaagg acgaacggcc ccgggtcttc
     1441 ggcgggcagg tggccggcca ggcgctggtg gccgccggcc gcaccgtcga cgacggcaag
     1501 ggcgtgcact cgctccacgc ctacttcctc cgccccggcg acccgacgat ccccatcgtc
     1561 tacgaggtcg accggatccg ggacgggaag tcgttcacca cccgccgggt cgtcgccatc
     1621 cagcgggggg aggcgatctt caacctccag gcgtcgttcc accgggccga ggacggcttc
     1681 gaccaccagg tgacgatgcc cgaggcgccg gcgcccgaga gcctgccccg ggccgacgag
     1741 atggagccgc cccgccccgg gcggctctgg gagcgccagc ccgtcgacat ccgctacgtc
     1801 gacgggccgc cgtgggaccg ggagccctcg gactcgggcc gccagctcgt gtggatccgg
     1861 gccgacggca cgctgcccga cgacccgctg ctccacgtct gcatcgtcac ctacgcctcc
     1921 gactacacgc tgctcggctc gtcgctcgtg ccccacggcg tgtcgtactg gcgcgacgac
     1981 gtcatgatgg ccagcctcga ccatgccatg tggttccacc gcccgttccg ggccgacgag
     2041 tggctgctct acagccagac gagtccctcg gcgtcgggcg cccgggggct ggcctacggc
     2101 ggcatcttcc gccgggacgg gacgctggtc gtctccgtgg tccaggaggg cctgatccga
     2161 ccgatcgtcg acccggccaa gctgagccgc atgtacaagt cctgaccgaa ggggttcccc
     2221 ggatgccctc tcccgacgga cgggtcgacc tccgctccga caccgtcacc acccccacgc
     2281 cggcgatgcg ccgggccatg gccgaggccg aggtcggaga cgacgtctac ggcgaggacc
     2341 cgacggtcaa ccggctcgag gagctggccg cggcgagggt ggggaaggag gcggcgctct
     2401 acctgccgtc ggggacgatg ggcaaccagg tcgccctccg ggtgctgact cggccgggga
     2461 cagaggtgct ctgcgccgcc cgggcccaca tccgccagta cgaggcggcg gccgccgccc
     2521 gcaacgccgg cgtccaggtc cggccgctcc acgaccggga gggaacgttc gaggccgacg
     2581 ccgtcgacgc cgcctgccaa gggccggccc accacctccc accgctgtcg ctggtggcca
     2641 tcgagaacac gcacatgccg gccggcgggg tgccgtggcc gccggcccgg gtggaggcgg
     2701 tggcggcggc cgcccggcga cacgggctgc ccgtgcactg cgacggcgcc cggctgttca
     2761 acgccgccgt cgccctcggc gtcggcgctc cggtgctcgc cgccccggtc gacaccgtga
     2821 tgttctgcct gtccaagggt ctctcggcgc cggtcgggtc gatgctggca gggtccgccg
     2881 acgtcatcgc cgccgcccgg gaggagcggg cccggctcgg cggcggcatg cgccaggcgg
     2941 gggtgatcgc cgccgccgg
//
LOCUS       DATGJT010000072         5156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_320631, whole genome shotgun sequence.
ACCESSION   DATGJT010000072 DATGJT010000000
VERSION     DATGJT010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5156
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320631"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..795
                     /locus_tag="VKX24_01240"
     CDS             <1..795
                     /locus_tag="VKX24_01240"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HLJ07133.1"
                     /translation="GYFPQWAWSWPLNRRVMYNRASADAQGNPWDPTRPGIKWNGTKW
                     VGDVPDFPPTSPPSEGKGAFIMTGEGVGRLFAPGSLTSDGPFPEHYEPMESPVANALS
                     KVQNDPAVFLYKDAKDTFAAIDSEFPYVATTYRVTEHEHYLTQNVPYLVEAMPDFFVE
                     LPVELAEKKGITNGGKVRVKSKRGEVVGVALVSKRIRPLKVGGKTVYQVGIPVHWHFA
                     AGRGADPSTGKFNSTPEMANLLTPYVGDANVRTPEFKGFLVNVEKA"
     gene            807..1850
                     /gene="fdxH"
                     /locus_tag="VKX24_01245"
     CDS             807..1850
                     /gene="fdxH"
                     /locus_tag="VKX24_01245"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0045333 - cellular respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HLJ07134.1"
                     /translation="MSTELGLAIRRKSATPASSTGIRRHTTEIAKLVDIDLCIGCKAC
                     EVACKEWNDLPSDHTSNFGSYQSHPDLTASTWDLMRFNEIELDNGDLAWLIRKDSCLH
                     CDDPGCLAACPAPGAIVQYTNGIVNFDQTKCIGCQYCVTGCPFDIPRFDQKTKKVYKC
                     TLCVDRVSAALEPACVKSCPTGAIKFGGKAEIVGIANGKVDKLKKRGFAHAMLYDPAG
                     VGGLHMMYVVPRGDKLSEYGLPEDPHVPGTFFSALSVLRKLGSISVWGGLLATGIFYL
                     RTGRRKPPPEDDAVAEAERLGREPAPVGAGNGAAGGGDGASGAGDGDGDGVGPVSMPQ
                     PPPPQPEPQEEER"
     gene            1847..2527
                     /locus_tag="VKX24_01250"
     CDS             1847..2527
                     /locus_tag="VKX24_01250"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HLJ07135.1"
                     /translation="MSALRMGSGARTNGEGAAGPTLERYTLTDRIVHWWVALTFIALM
                     VSGFALGYPRAYFLSGLFGGGQTMRFLHPWFGVAFTLGILWMLVSWARDMRMQAVDRE
                     WVRRLRTYTAEGHTGLDTGRYNAGQKGYYWFSVVLGLVLLLTGLPLWGAWLGGAATLH
                     HWARFLHHGAFLLMVGGFIIHVYMSTVMFPGTFSAMTTGRVSRAWAAWHHPAWFRVQD
                     RRRAGASR"
     gene            2571..3446
                     /locus_tag="VKX24_01255"
     CDS             2571..3446
                     /locus_tag="VKX24_01255"
                     /inference="COORDINATES: protein motif:HMM:NF016131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HLJ07136.1"
                     /translation="MGRPGGPGDFAARLARAEHLLAAPGGGGGAAGPLALMAAVLRYQ
                     AARAGRPAVQDAAAALTAGAELRRAAGRFPLLDLAAAVEPVAAEIPSAVESLAGAPLP
                     DPLNAAGMALRDADDGERAGLVEAWLEDPAAPEPVLGFWARVAAGPILEAARAAVATP
                     DRDEWTGAACPACGGPAQLSVIAEESGEFMGGSPRFLVCGRCAGWWTFPRAVCAWCSE
                     SDPGRMPSFVPDQCRVTRIDGCESCGHYVKTFDLREPGATELVPLVDDVATVSLDLWA
                     QDQGLARPLVSFAGV"
     gene            3550..4392
                     /locus_tag="VKX24_01260"
     CDS             3550..4392
                     /locus_tag="VKX24_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012802002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HLJ07137.1"
                     /translation="MAAGNPWTIEEGGGPVVACAIHAGSEVRAEVLRHMAVRRRQRVY
                     EEDPYTDRLTAVAGTSVVVHRSRFEFDLNRSRERAVYRTPGDAWGLPVWRDGLPAAVR
                     QRSLRLYDRFYTELAAVLARAGAGGRPFVVLDLHSYNHRRGGPGAPPADPAANPEINL
                     GTGSLDRERFGRLAERFAADLRTVEVGGRPFDVRENVRFRGGHLSRRVHATFPGQGCC
                     LAVEVKKVFMDEHTGLIDEPVWAAVHEALSAAIPGVVDELGAVDGLRAVRRLRPRRRA
                     AGAA"
     gene            4472..4684
                     /locus_tag="VKX24_01265"
     CDS             4472..4684
                     /locus_tag="VKX24_01265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07138.1"
                     /translation="MHSRRTRRLAAVATAAGALTLLGATGAIAAPAPPAGPGAVQVSQ
                     QPDSGVAPLCVIMPQTKGCENGPIQK"
     gene            complement(4691..5086)
                     /locus_tag="VKX24_01270"
     CDS             complement(4691..5086)
                     /locus_tag="VKX24_01270"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013421669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HLJ07139.1"
                     /translation="MALSDEKYMLLTTFRRDGTPVSSPVWVVPLDGPKVGFYTSSGSG
                     KAKRLAHTARVTVQPCDARGRVKAGTAPVEGTAEVVTGPALEAIRGKIVAKYGVMTKI
                     AGVFNTLGGAIKRKRVPYADRGVVITPAG"
BASE COUNT          680 a         1928 c         1828 g          720 t
ORIGIN      
        1 ggctatttcc cccagtgggc ctggtcgtgg ccgctcaacc ggcgggtcat gtacaaccgg
       61 gcctcggccg acgcccaggg gaacccctgg gacccgacgc ggccgggcat caagtggaac
      121 ggcaccaagt gggtcggcga cgtccccgac ttcccgccga cctcgccgcc gtcggagggc
      181 aagggcgcct tcatcatgac cggtgagggc gtgggccggc tgttcgctcc cgggtcgctg
      241 acctcggacg ggcccttccc ggagcactac gagccgatgg agtctcccgt cgccaacgcc
      301 ctgtccaagg tgcagaacga cccggcggtg ttcctctaca aggacgccaa ggacaccttc
      361 gccgccatcg actccgagtt cccctacgtg gccaccacct accgggtgac cgagcacgag
      421 cactacctca cccagaacgt gccctacctg gtggaggcca tgcccgactt cttcgtcgaa
      481 ctgccggtgg aactggccga gaagaagggg atcaccaacg gcggcaaggt ccgggtgaag
      541 tcgaagcggg gcgaggtggt cggcgtcgcc ctggtcagca aacggatccg cccgctcaag
      601 gtcggcggca agaccgtcta ccaggtgggg atcccggtcc actggcactt cgccgccggc
      661 cggggcgccg accccagcac cggcaagttc aactccacgc cggagatggc caacctgctc
      721 acgccctacg tcggtgacgc caacgtgcgc acgccggaat tcaagggctt cctcgtcaac
      781 gtcgagaagg catagggggc cggggcatgt ccaccgaact cgggctcgcc atccgccgca
      841 agtcggccac gccggcgtcg tcgaccggca tccgccgcca caccaccgag atcgccaagc
      901 tcgtcgacat cgacctctgc atcggctgca aggcctgcga ggtggcctgc aaggagtgga
      961 acgacctgcc gtccgaccac acgtcgaact tcggcagcta ccagagccac cccgacctga
     1021 ccgcctcgac gtgggacctc atgcggttca acgagatcga gctcgacaac ggcgatctgg
     1081 cctggctcat ccgcaaggac agctgcctgc actgcgacga ccccggctgc ctggccgcct
     1141 gcccggcgcc cggggccatc gtccagtaca ccaacggcat cgtgaacttc gaccagacga
     1201 agtgcatcgg ctgccagtac tgcgtcaccg gctgcccgtt cgacatcccc cgcttcgacc
     1261 agaagaccaa gaaagtctac aagtgcacgc tgtgcgtcga ccgtgtctcg gcggcgctcg
     1321 agccggcctg cgtcaagagc tgcccgaccg gtgccatcaa gttcggcggc aaggccgaga
     1381 tcgtcggcat cgccaacggc aaggtcgaca agctgaagaa gcggggcttc gcccacgcca
     1441 tgctctacga cccggccggg gtcggcgggc tgcacatgat gtacgtcgtg ccccggggcg
     1501 acaagctgtc ggagtacggg ctccccgagg acccccatgt gcccgggacg ttcttctccg
     1561 ccctgtcggt gctccgcaag ctcggctcca tctcggtctg gggcgggctg ctggccaccg
     1621 ggatcttcta cctgcggacg ggccggagga agccgccccc ggaggacgac gccgtggccg
     1681 aggccgaacg gctcggtcgg gagccggcgc cggtcggcgc cggcaacggc gccgccggtg
     1741 gcggcgacgg cgccagcggt gccggggacg gggacggcga cggggtgggc ccggtcagca
     1801 tgccgcagcc cccgccaccc cagcccgagc cgcaggagga ggagcgatga gcgcgctgcg
     1861 gatgggcagc ggtgcccgga ccaacggcga aggcgcagcc ggcccgacgc tggagcgcta
     1921 cacgctgacc gaccgcatcg tccactggtg ggtggcgctc acgttcatcg ccctgatggt
     1981 gtccggattc gccctcggct acccccgggc ctatttcctc tccgggctgt tcgggggcgg
     2041 ccagacgatg cggttcctgc acccctggtt cggcgtggct ttcacgctcg ggatcctgtg
     2101 gatgctggtc tcgtgggccc gcgacatgcg gatgcaggcc gtcgaccggg agtgggtccg
     2161 gaggctgcgg acctacaccg ccgaaggcca caccggcctc gacaccggcc gctacaacgc
     2221 cggacagaag ggctactact ggttctcggt ggtgctcggg ctggtgctcc tcctcaccgg
     2281 cctgccgctg tggggcgcat ggctgggcgg ggccgccacg ctgcaccact gggcccggtt
     2341 cctccaccac ggcgccttcc tgctgatggt cggcggcttc atcatccacg tgtacatgtc
     2401 gacggtcatg ttccccggca ccttctcggc catgaccacc ggccgggtca gccgggcctg
     2461 ggccgcctgg caccacccgg cctggttccg cgtccaggac cgccgccggg ccggagcgag
     2521 ccgctgaccc cgccggcccc ggccgccgcc ggccgatgac gttccgggcc gtgggccgtc
     2581 cgggcgggcc gggggacttc gccgcccggc tggcccgggc cgagcatctg ctggccgccc
     2641 ccggaggggg tggcggtgcc gccgggccgc tggcgctgat ggccgccgtc ctccggtacc
     2701 aggccgcccg ggccggccgg ccggcggtgc aggacgccgc cgcggcgctc acggccggcg
     2761 ccgagctccg ccgggccgcc ggccggttcc cgctgctcga cctggccgcc gccgtcgagc
     2821 ccgtcgccgc cgagatcccg tcggcggtcg agagcctggc cggtgctccg ctccccgatc
     2881 cactgaacgc tgccggtatg gcgctgcgcg acgccgacga cggcgaacgg gcggggctgg
     2941 tcgaggcgtg gctcgaggat ccggccgccc cggagccggt cctcggcttc tgggcccggg
     3001 tggccgccgg cccgatcctg gaggccgccc gggcggccgt cgccactccg gaccgcgacg
     3061 agtggaccgg tgccgcctgc ccggcctgcg gcggccccgc ccagctctcg gtcatcgccg
     3121 aggagtcggg cgagttcatg ggcggttcgc cccgtttcct ggtctgcggc cgctgcgccg
     3181 ggtggtggac gttcccccgg gcggtctgcg cctggtgctc ggagtcggat cccggccgga
     3241 tgccgtcgtt cgtccccgac cagtgccgtg tcacccggat cgacggctgc gagagctgcg
     3301 gccactacgt gaagacgttc gacctccggg agccgggggc gaccgagctc gtcccgctgg
     3361 tcgacgacgt cgccacggtc agcctcgacc tctgggctca ggaccagggg ctggcccgtc
     3421 cgctggtgtc gttcgccggg gtctgagccg gagcgcgtcg gtcctcaggc gggcggcggg
     3481 cgcccatgcg cggtgggcgg cgaccgggcg cgattggcgc ccggacgacg atccgggcac
     3541 agtcgataga tggcggcagg aaatccctgg accatcgagg aaggcggcgg cccggtggtc
     3601 gcctgcgcca ttcacgccgg gagcgaagtc cgggccgagg tcctgcggca catggccgtc
     3661 cgccgccggc agcgggtcta cgaggaggac ccctacaccg accggctcac cgccgtggcc
     3721 gggacgtccg tcgtcgtcca ccgctcccgc ttcgagttcg acctcaaccg gtcccgggag
     3781 cgggcggtct accgcacccc gggcgacgcc tggggcctgc cggtctggcg ggacgggctg
     3841 ccggcggcgg tgcggcagcg ctcgctgcgg ctctacgacc gcttctacac cgagctggcg
     3901 gcggtgctgg cccgggccgg cgccggcggt cgcccgttcg tcgtcctcga tctccacagc
     3961 tacaaccacc gccggggcgg gcccggcgcc ccgccggccg acccggccgc caaccccgag
     4021 atcaacctcg gcaccgggtc gctcgaccgg gagcgcttcg gcaggctggc cgagcgcttc
     4081 gccgccgacc tccgcaccgt cgaggtcggc ggccgcccgt tcgacgtgcg ggagaacgtc
     4141 cgcttccggg gcgggcacct gtcccgccgg gtccacgcca ccttccccgg gcagggctgc
     4201 tgcctggccg tggaggtgaa gaaggtcttc atggacgagc acaccggcct gatcgacgag
     4261 ccggtgtggg cggcggtgca cgaggcgctg tcggccgcca tccccggcgt cgtcgacgag
     4321 ctcggcgccg tcgacggact gcgggccgtc cgccggctgc ggccccgtcg ccgcgccgcc
     4381 ggcgcggcat gaggcgcggc cattccggaa atgaatcgca gtacgatccg cctgctgcga
     4441 ccgtttccgt gcctcgaagg ggagtttggc catgcacagc cgtcgaaccc gcagactcgc
     4501 cgccgtcgcc accgccgccg gagccttgac gctgctcggc gccaccggcg ccatcgccgc
     4561 tccggccccg ccggccggcc cgggtgccgt ccaggtctct cagcagcccg acagcggggt
     4621 cgcccccctc tgcgtcatca tgccgcagac gaaggggtgc gagaacgggc ccatccagaa
     4681 gtgacggggg tcagcccgcc ggggtgatga ccacgccccg gtcggcgtag ggcacccgct
     4741 tgcgcttgat cgccccgccg agcgtgttga agaccccggc gatcttcgtc atcacgccgt
     4801 acttcgccac gatcttgccc cggatggcct cgagtgcggg gcccgtcacc acctccgctg
     4861 tgccctccac cggtgccgtc cccgccttca cccggccccg ggcgtcgcag ggctggaccg
     4921 tcacccgggc ggtgtgggcc agccgcttcg ccttgcccga gcccgagctg gtgtagaagc
     4981 cgaccttcgg gccgtcgagc gggacgaccc acaccggcga ggagaccggg gtcccgtcgc
     5041 ggcggaaggt cgtcagcagc atgtacttct cgtcactgag cgccatgcct ggcgatgcta
     5101 gggccggatc aggcgacggc gctggcggcg gcgtcctcct ccggggttcc gagcag
//
LOCUS       DATGJT010000073         3210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1149948, whole genome shotgun sequence.
ACCESSION   DATGJT010000073 DATGJT010000000
VERSION     DATGJT010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149948"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VKX24_01275"
     CDS             <1..470
                     /locus_tag="VKX24_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07140.1"
                     /translation="ADLLVLDEPTAGLDPLMEQAFRHAIGEARRRGQSVFLSSHILSE
                     VEALCDRVGILRTGSLVDMGTLAEMRHLSALSVEATFERAVPDVSSVPGVSSVQVEGN
                     MLRCQVRGSVEPLLKVLAAAGTHELLSREPSLEELFLAHYGSEPRDDDGAGRS"
     gene            442..2094
                     /locus_tag="VKX24_01280"
     CDS             442..2094
                     /locus_tag="VKX24_01280"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HLJ07141.1"
                     /translation="MTTTALGDPERPAAARGSSAVVARLTARKAARSGALWGYVFGVF
                     VVSSALGYAAAYKTPADRTRAAATFANNAGIDALIGRGHQVQTVVGFTVWRSLGVLSV
                     VGAVWAILASTRLLRGEEDAGRWELLLAGRTTRRGAVGQAMAGVAAGALALFGVTALV
                     TVLLGRTRTARMPVGGALFFSVALVAGAVAFLFLGVLGSQLTATRRQAAAYCGGVLAV
                     SYGLRLVADSSVRLGWLRWATPLGWVENLRPLSAPQPLALVPIAAWSAVAAAAALWCA
                     ERRDLGSSIVPDRTAARARTGLLTGPLGLDLRLSRSYLSWWYVGIAGATLMVGFISRA
                     AAGAITASKSAEAVIARLGATGVGARLFLGVTLLVAAMLIALVAAGQVGSIRSGEAGG
                     QLDNLLVRPVSRWRWYGSAMALATVGIVLAGVLAGACGWLGEAVEHSGVPFPSMLAAG
                     VNLVPPALVVLGFGALCFGVAPRATSVATYGLVVWAFLVDLVGGVVGLNHWLLDTSLF
                     HQMSPAPAIGPNWPVDAVMTALAVAAAAAGGAAFVRRDLAGA"
     gene            complement(2244..2813)
                     /locus_tag="VKX24_01285"
     CDS             complement(2244..2813)
                     /locus_tag="VKX24_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013422051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07142.1"
                     /translation="MAIVLIVAGALAFWGYSFANSNVHNQLAEQKIVFPPAAAFQHAK
                     AGTEITPSMIPSVSQYAGQPLTTGAQAEVYANDFIAVHLQEIGNGLTYSQESTLARSL
                     PAGSPAAAKAEGISTTLFQGTTLRGLLLEAYSFSVFGEIAFVGAIVAWSLGFVMLLLV
                     GLGMRHARRTSAADEIVGAHVVHGEEKAA"
BASE COUNT          358 a         1178 c         1182 g          492 t
ORIGIN      
        1 gggccgacct cctcgtcctc gacgagccga ccgcggggct cgacccgctg atggagcagg
       61 ccttccggca cgccatcggc gaggcccgcc ggcgcggcca gagcgtgttc ctctcctccc
      121 acatcctgag cgaggtggag gcgctctgtg accgggtggg catcctgcgc acggggtcgc
      181 tcgtcgacat ggggaccctg gccgagatgc gccacctctc ggccctgagc gtcgaggcca
      241 ccttcgagcg ggcggtgccc gacgtctcga gcgtgcccgg ggtgagctcg gtgcaggtcg
      301 aggggaacat gctgcgctgc caggtccggg ggagcgtcga gcccctgctc aaggtgctgg
      361 cggcggccgg cacccatgag ctcctgagcc gggagccgtc actcgaggag ctgttcctcg
      421 cccactacgg gtccgagccg cgtgacgacg acggcgctgg gcgatcctga gcgcccggcg
      481 gccgcccggg ggtcttccgc ggtcgtcgcc cgcctcaccg cccgcaaggc ggcgcgctcg
      541 ggcgcgctgt ggggctacgt cttcggcgtc ttcgtcgtct cctcggccct cgggtacgcc
      601 gccgcctaca agaccccggc ggaccggacc cgggccgcgg ccaccttcgc caacaacgcg
      661 ggcatcgacg ccctcatcgg ccggggccac caggtgcaga cggtcgtcgg cttcaccgtc
      721 tggcggagcc tgggcgtcct gagcgtcgtc ggcgccgtct gggcgatcct cgcctcgacc
      781 cgactgctgc gcggcgagga ggacgccggt cgctgggagc tgctgctcgc cgggcggacg
      841 acgcgccggg gggcggtggg ccaggccatg gccggggtgg ccgccggcgc gctcgccctg
      901 ttcggcgtca ccgctctcgt gacggtgctc ctcggccgga cccgtaccgc ccggatgccc
      961 gtcgggggcg cgctgttctt ctcggtcgcg ctggtggcgg gggccgtggc cttcctgttc
     1021 ctcggtgtgc tgggcagcca gctgacggcg acccgccggc aggcggccgc ctactgcggc
     1081 ggcgtgctgg ccgtgagcta cgggctgcgc ctggtcgccg actcctcggt ccgcctcggt
     1141 tggctccgct gggcgacccc gctcgggtgg gtggagaacc tccggccgct ctcggccccg
     1201 cagccgctcg ccctcgtccc catcgccgcc tggagcgcgg tggcggcggc agccgccctg
     1261 tggtgcgccg agcggcggga cctcggctcg agcatcgtcc ccgaccgcac cgcggcgcgg
     1321 gcccggacgg ggctgctcac gggccccctg gggctcgacc tgcgtctgtc gcgctcgtat
     1381 ctgtcgtggt ggtacgtggg gatcgccggc gccaccctca tggtcggctt catctccagg
     1441 gcggcggcgg gggccatcac cgcctccaag agcgccgagg cggtgatcgc ccgtctcggg
     1501 gcgaccgggg tcggggcccg gctgttcctc ggcgtgaccc tgctcgtcgc ggccatgctg
     1561 atcgcgctgg tcgccgccgg gcaggtgggc tcgatccgca gcggcgaggc cggcggccag
     1621 ctggacaacc tcctcgtgcg ccccgtctcg aggtggcgct ggtacggctc ggccatggcc
     1681 ctggccacgg tggggatcgt cctcgccggg gtgctggccg gggcctgcgg ctggctcggg
     1741 gaggccgtcg agcactccgg cgtcccgttc ccctcgatgc tcgccgccgg ggtcaacctg
     1801 gtgccgccgg cgctggtcgt gctgggcttc ggtgcgctgt gcttcggggt cgccccccgg
     1861 gcgacgtcgg tcgccaccta cggcctcgtc gtctgggcgt tcctcgtcga cctcgtcggc
     1921 ggggtggtcg ggctcaacca ctggctgctc gacacctcgc tcttccacca gatgagtccg
     1981 gcgccggcga tcgggcccaa ctggcccgtg gacgccgtca tgaccgccct ggcggtggcc
     2041 gccgccgctg ccggcggggc cgcattcgtg cggagggacc tggccggggc ctgaagcggg
     2101 cgactcctcc ctcgtcgggg gggatgtcgg tcgccacgcc cggcgtgcgc gtcggcggcg
     2161 tcccgctcag cggaccccga acagcaaccg acccggccgg acatcgtccg gccgggtcgg
     2221 ttggttcccg gagagaaggt tgcctaggcc gccttctcct cgccgtgcac cacgtgggca
     2281 ccgacgatct cgtcggctgc actggtgcgg cgggcgtggc gcatcccgag tccgacgagg
     2341 agcagcatca cgaatccgag tgaccaggcg acgatggccc cgacgaaggc gatctcaccg
     2401 aacaccgaga aggagtaggc ctcgaggagg agcccccgaa gcgtcgtccc ctggaacagg
     2461 gtggtcgaga tcccctcggc cttggcggct gccggtgaac cggccggaag cgagcgggcg
     2521 agcgtgctct cctgggagta ggtcagcccg ttgccgatct cctgcaggtg caccgcgatg
     2581 aagtcgttgg cgtacacctc ggcctgcgcg ccggtggtca gcggctggcc cgcgtactgc
     2641 gagaccgacg ggatcatcga cggcgtgatc tcggtgcccg ccttggcgtg ctggaacgcc
     2701 gccgccggcg ggaagacgat cttctgctcg gcgagctggt tgtgcacgtt gctgttggcg
     2761 aagctgtagc cccagaacgc gagggccccg gccacgatca ggacgatggc cacaagcagg
     2821 ccccctcctg agaccaacac atcaaaggtc ttacgtctca tagctttgcg tctccttggg
     2881 aacttgtgat ttgcatcaca tgtactgact ccaggatccg ctcccgagcc ctcgggcaac
     2941 agggacgaaa ggaccgaacg gttcgggact ttgggcccta atcggggcgc cggcggccgc
     3001 cggccggcgc gccgaccagg aagaacggcc gttcacgcgc ccgggcggct cctacgatgg
     3061 cccgggtgcc ccctcggagc gtccccgggg tcctccggtc gaccgcccgc ctcctcgtcg
     3121 gccgcccgct ccggaccgcc gagaccctgc aggagcggat cagccccctc gagggcctgc
     3181 cggcgctctc gctcgacgcc ctcacctcgg
//
LOCUS       DATGJT010000074         2688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840 k141_9670,
            whole genome shotgun sequence.
ACCESSION   DATGJT010000074 DATGJT010000000
VERSION     DATGJT010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9670"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VKX24_01290"
     CDS             complement(<1..544)
                     /locus_tag="VKX24_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate synthetase"
                     /protein_id="HLJ07143.1"
                     /translation="MLIDGEHYPTVVRAAVGELRAGGRTVVGAALVGGAEKLSAAVGP
                     GDYGLDDCVAGESPLAALLAGLDRLHPDEVVDLSDQPVVDARTRLRLAAHCLARGVPY
                     RGAGFCFEVPPRPRLAAKPSIAVIGTGKRTGKTAVAAELARHLKADGRPPVLVAMGRG
                     GPAAPELVDPAVADLSPEALL"
     gene            complement(721..1905)
                     /locus_tag="VKX24_01295"
     CDS             complement(721..1905)
                     /locus_tag="VKX24_01295"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00306.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cofactor-independent phosphoglycerate mutase"
                     /protein_id="HLJ07144.1"
                     /translation="MNLRYVVCIPDGAADEPLDELGGRTPLEAAAMPHLARLAAAGEV
                     GRAATIPAGLPPGSDVGNMAILGYDPGRYHTGRAPIEAAAMGVDLQPGQVAYRCNLVT
                     LDDSTGTMVDFSAHHIATELSKPIIEAVDAELGAGRDGLWFHPGVMYRHVMVAPAELG
                     KAECVPPHDLTGKPAVWPDGPAAAELRRIMEASKEIVRAKAAELGADATQVWLWGQGT
                     RPMLPSFRDRWGLSGRLVTAVDLIRGLGVLSGIDPVEVEGATGYYDTNYEGKRDACLA
                     SLSDRELFVIHVEASDEAGHNGEADRKVEALENWDRRIIGPLVEALDDLGPWRLMLMP
                     DHATPCVLRTHTPDPVPYLIYDPAEPGPGGVYTERGVEDCAAVPAHDLMARFLGRDPA
                     LA"
     gene            1943..2575
                     /locus_tag="VKX24_01300"
     CDS             1943..2575
                     /locus_tag="VKX24_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006940658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HLJ07145.1"
                     /translation="MPGRRLPMFPLGTVLLPHAHLPLHIFEPRYRALIKDVLAGDGEF
                     GVVLIERGQEVGGGDTRFPVGTVARVMQTAELPDGRWLVDAVGTDRFRVAEWLPEDPY
                     PQALVEPVEDEPDDTGPEAGQRRSAVERLLRQVLALQVELGFPAPSAVRTLDEEPAVA
                     AFEAALLSPIGPMDAQKVLEAPGTLARLTLLEDFLEDARDVLSRRISETD"
BASE COUNT          359 a          973 c         1008 g          348 t
ORIGIN      
        1 cgaggagcgc ctcgggcgag aggtcggcga cggccgggtc gacgagctcc ggtgcggccg
       61 gcccgccccg gcccatggcc acgaggacgg gcgggcggcc gtcggccttc aggtggcggg
      121 ccagttcggc ggcgacggcc gtcttccccg tccgcttgcc ggtgccgatg acggcgatcg
      181 acggcttggc cgccagccgg gggcggggcg ggacctcgaa gcagaagccc gccccccggt
      241 agggaacccc ccgggccagg cagtgggcgg ccagccggag ccgggtgcgg gcatcgacga
      301 cgggctggtc ggagaggtcg accacctcat ccggatgcag gcggtcgagc ccggccagca
      361 gggcggccag cggggactcc ccggcgacgc agtcgtcgag gccgtagtcg ccgggcccca
      421 ccgccgccga cagcttctcc gccccgccga ccagggcggc gccgaccacc gtccgcccgc
      481 cggcgcgcag ttccccgacg gcggccctga cgaccgtcgg gtagtgctcc ccgtcgatga
      541 gcacgagcgt gcgcgacggc cgatcggcct gtggaaaaag gacgggcgtg gctcaagacc
      601 tcacacgctg gaccgctcgg caagagaccc gagcggaagt cccggaagtc tagcccgccc
      661 tccctccaac gaactggcgt tccttttccg cggtatcccg gtaaacgaac gccggtcggg
      721 tcaggcgagc gccggatccc gcccgaggaa cctggccatg aggtcgtggg ccgggacggc
      781 ggcgcagtcc tccactcccc gctccgtgta gacgccgccg gggcccggtt cggcggggtc
      841 gtagatgagg taggggacgg ggtcgggcgt gtgggtccgc agcacgcagg gcgtggcgtg
      901 gtcgggcatc agcatcagcc gccaggggcc gaggtcgtcg agggcctcga ccaggggccc
      961 gatgatgcgc cggtcccagt tctccagggc ctcgaccttc cggtcggcct cgccgttgtg
     1021 accggcctcg tcggacgcct cgacgtggat cacgaagagc tcccggtcgg acagactggc
     1081 caggcaggcg tcgcgctttc cctcgtagtt cgtgtcgtag tagccggtgg cgccctcgac
     1141 ctcgacgggg tcgatgcccg agagcacgcc gagcccccgg atcaggtcga cggcggtgac
     1201 gagccggccg gagaggcccc accggtcccg gaacgacgga agcatgggcc gggtgccctg
     1261 gccccacagc cagacctggg tggcgtcggc gccgagctcg gccgccttgg cccgcacgat
     1321 ctccttcgac gcctccatga tccggcgcag ctcggcggcg gccggcccgt cgggccagac
     1381 ggcgggcttg ccggtgaggt cgtggggcgg cacgcactcc gccttgccca gctccgccgg
     1441 cgccaccatc acgtggcggt acatgacccc cgggtggaac cacagcccgt cacggccggc
     1501 gccgagctcg gcgtcgaccg cctcgatgat cggcttcgag agctcggtgg cgatgtggtg
     1561 ggccgagaag tcgaccatcg tgccggtcga gtcgtcgagc gtgacgaggt tgcagcggta
     1621 ggccacctga cccggctgca ggtcgacgcc catggcggcg gcctcgatcg gcgcccgccc
     1681 ggtgtggtag cgccccgggt cgtagccgag gatggccatg ttcccgacat cgctgcccgg
     1741 cggaagcccg gccgggatcg tggccgcccg cccgacctcg ccggcggccg ccagccgggc
     1801 gagatggggc atggccgccg cctccagcgg cgtccgcccg ccgagctcgt ccagcggctc
     1861 gtcggcggcc ccgtcgggga tacagaccac gtagcgcagg ttcacgaccc gagatgctac
     1921 ggccagtacg tatgctcagc ggatgccggg tcggcgactc ccgatgttcc ccctcgggac
     1981 ggtgctgctg ccccacgccc acctgccgct gcacatcttc gaacctcgct accgggcgct
     2041 gatcaaggac gtgctggccg gggacggcga gttcggcgtc gtcctcatcg aacggggaca
     2101 ggaggtgggg ggcggcgaca cgaggttccc cgtcgggacc gtcgcccggg tgatgcagac
     2161 ggccgagctg ccggacggcc ggtggctggt cgacgccgtc ggcaccgacc ggttccgggt
     2221 ggcggagtgg ctgcccgagg atccctatcc ccaggcgctg gtcgagccgg tcgaggacga
     2281 acccgacgac accggcccgg aggcgggaca acggcgcagc gccgtcgagc ggttgctccg
     2341 ccaggtgctc gccctgcagg tggagctggg gttccccgcc ccgtcggctg tccggaccct
     2401 cgacgaggaa cccgccgttg ccgccttcga agcggcgctc ctgtcgccga tcggcccgat
     2461 ggacgcccag aaggtgctcg aggcgccggg cacgctcgcc cggctgaccc tgctcgaaga
     2521 cttcctcgag gacgcccgcg acgtcctcag ccggcgcatc tccgaaacgg actgaccgct
     2581 acaggccgag ctgggcggcc acggcggtgg ccgtcggctc cacggagatc ccgaggtcga
     2641 cggtggagat ggcccgctcg gggtccttca ggccgtgacc ggtcagcg
//
LOCUS       DATGJT010000075         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_735819, whole genome shotgun sequence.
ACCESSION   DATGJT010000075 DATGJT010000000
VERSION     DATGJT010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735819"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            143..1546
                     /gene="mptB"
                     /locus_tag="VKX24_01305"
     CDS             143..1546
                     /gene="mptB"
                     /locus_tag="VKX24_01305"
                     /inference="COORDINATES: protein motif:HMM:NF038066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol phosphomannose-dependent alpha 1,6
                     mannosyltransferase MptB"
                     /protein_id="HLJ07146.1"
                     /translation="MPAILTDEVLGCIGAGAAAAVLVVIGGLVVGPQAALHGRFVTAC
                     GYAAGCGGVVALVASWLWLGRVLARSSAARRPPAVVGALAAWGLPLLCGPALFSRDIF
                     SYAAQGREIAVGINPYHHGPAVLGGGPWLRFVSPTWSSARSPYGPFFLGIDGLIARHA
                     GGHALIAAALLRLVSCAGVVLLAAALYRLARSYGTDPGTALWLGVLNPLMLLHVVSGG
                     HNEGLMLGLMVAGLVCARERRFAAGLALCLLAAAVKVPAALAALYVAGDWLASSPDGA
                     ARARAAARMAATTAATAVTATAFAGLGWGWLATVTTPARVRTALSPTTDLGLAAGRAV
                     RDLGLPVPAASVLTAVRWGGMALAVALGVALFAGRLRRPAATGIGLTLLVTVALGPAV
                     QPWYLLWGLVPLAAACPERLRPVLVWVSAGLCALVFPNGSVVPDIVAAAFLAVTAAVT
                     AGHLRDRARLDVRPAPV"
     gene            1550..>2075
                     /locus_tag="VKX24_01310"
     CDS             1550..>2075
                     /locus_tag="VKX24_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07147.1"
                     /translation="MRRFVRPFLAGAALAAVGAAVVADGVPAGAAPVGAPVRPSVVLL
                     VVPGLTWATAPPSLDPWAKASLAFRTADRHRRVDVYLTIGKGRRTGGISAGAGPLDRN
                     GDAVTLRQWPALVRHDRTLRFGGHLGELGRQLAGHGVAYAVVGEDSGDGTAAALGADR
                     TGRVPRFSAGGAAEA"
BASE COUNT          174 a          813 c          788 g          300 t
ORIGIN      
        1 agcaggccgg ccaccgtggt gggacgggga gcggtacggg gagacatcgt ccgagcctac
       61 ggacgcagct atgaagcact tctgagcggt tcagcggggt tcaggggccg gatccgcccc
      121 ggaggcgcga ccgggctcta gagtgcccgc catcttgacc gacgaggtgt tgggctgcat
      181 cggcgccggg gcagcggccg ccgtgctggt cgtcatcggc gggctcgtcg tggggcccca
      241 ggcggcgctg cacggccggt tcgtgacggc ctgcggctac gccgccggct gcggcggcgt
      301 cgtggccctc gtcgcctcct ggctgtggct cggccgggtc ctggcccgct cgtccgccgc
      361 ccgccggccc ccggccgtcg tcggcgcgct ggccgcctgg ggtcttccgc tcctgtgcgg
      421 cccggccctc ttcagccgcg acatcttcag ctacgccgcc cagggccggg agatcgccgt
      481 ggggatcaat ccctaccacc acggccccgc cgtcctcggc ggcggtccat ggctccgctt
      541 cgtctctccg acgtggtcga gcgcccgcag cccgtacggg ccgttcttcc tcggcatcga
      601 cgggctgatc gcccgccacg ccggcgggca cgccctgatc gccgccgcgc tgctgcggct
      661 cgtgtcgtgt gccggtgtcg tgctgctggc ggcggcgctc taccggctgg cgaggtcgta
      721 cgggaccgac ccggggacgg cactgtggct cggcgtcctc aacccgctga tgctcctcca
      781 cgtagtgagc ggcggccaca acgagggcct gatgctgggc ctcatggtcg ccggcctggt
      841 ctgcgcccgg gaacggcgct tcgccgccgg gctggcgctg tgcctgctgg cggccgccgt
      901 caaggtgccg gcggccctgg cggcgctgta cgtcgccggc gactggctcg cctcgagccc
      961 cgacggcgcc gcccgggccc gggccgccgc ccggatggcc gccacgacgg cggccaccgc
     1021 ggtcacggcg acggccttcg ccggcctcgg atggggttgg ctggcgacgg tgacgacgcc
     1081 ggcccgggtc cgcacggcgc tctcccccac gacggatctg ggcctggccg ccggccgggc
     1141 ggtgcgggac ctcgggctgc cggtcccggc ggcctcggtg ctgaccgccg ttcggtgggg
     1201 agggatggca ctggccgtcg ccctcggcgt cgcgctcttc gccggtcggc tccggcggcc
     1261 ggcggcgacc ggcatcggcc tcacgctgct ggtgaccgtg gccctcggcc cggccgtgca
     1321 gccctggtac ctgttgtggg gcctcgttcc gctggccgcc gcctgccccg agcgcctgcg
     1381 accggtgctg gtctgggtct cggccgggtt gtgtgcgctc gtcttcccca acggcagcgt
     1441 cgtccccgac atcgtggccg cggccttcct cgccgtcacg gcggcggtga cggcgggcca
     1501 ccttcgggac cgggcccgcc tcgacgtccg gcccgctccg gtctgagtcg tgcggcggtt
     1561 cgtgcggccg ttcctcgccg gtgccgcact ggccgccgtc ggcgccgccg tcgtcgccga
     1621 cggcgttccc gccggggcgg cgccggtggg ggcgccggtc cgcccgtccg tcgtcctcct
     1681 ggtcgtcccc ggcctgacct gggccaccgc cccgccgtcg ctcgacccct gggccaaggc
     1741 cagcctggcg ttccgaacgg ccgaccggca ccggcgcgtc gacgtgtacc tcacgatcgg
     1801 caaaggccgc cggacgggag ggatcagcgc cggggccggg cccctcgacc ggaacggcga
     1861 cgccgtcacg ttgcggcaat ggccggcgct ggtgcgccac gaccgaacgc tgcgcttcgg
     1921 cggccacctc ggcgagctcg gccgccagct cgccggccac ggcgtcgcct acgccgttgt
     1981 cggcgaggac tccggcgacg gcacggcggc ggccctcggc gccgaccgca ccggacgggt
     2041 gccgcgcttc agcgccggcg gcgccgccga ggccc
//
LOCUS       DATGJT010000076         4180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_839648, whole genome shotgun sequence.
ACCESSION   DATGJT010000076 DATGJT010000000
VERSION     DATGJT010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4180
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839648"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VKX24_01315"
     CDS             complement(<1..361)
                     /locus_tag="VKX24_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018788605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07148.1"
                     /translation="MTLDSVRVALRGVLANRLRSALTMLGILIGTSAVIMLVAVGTGI
                     SDGVQNQIRALGTNALYVIPERNARGRDRGGTSARRIRLTADDVKALSDKVRVPDANV
                     VTPTVSTTGTVTWEGVTY"
     gene            668..1978
                     /locus_tag="VKX24_01320"
     CDS             668..1978
                     /locus_tag="VKX24_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07149.1"
                     /translation="MLAGTLLGTSALGVAPPASGSAPPGSAAPPRAAAAATALLSVAS
                     DGTHGNADSFAPSLSADGSTVAFASLATNFGAPEAVHVVNVFLRDQRSGKTERISEGL
                     GGADADGDSKSPSVSADGSVVAFESSASNLVPGDTNGASDVFVRDRASGRTTLVSVDS
                     AGAQGNEGSFTPSISADGRYVAFASDATALVDGDHNRAEDVFVHDRRTGKTVKVSVAS
                     DGRPGNGNSYSPAISADGRFVAFASEATNLVRGDTNGATDVFVHDLGSGRTIRVSVAS
                     NGAQAEGDAFTPSISGDGRYVAFMSDAGNLRAGDGNGASDVFVHDGETGRTVLVSRPS
                     GGHPSDRGSFEPSLSVDGRSVAFVTDGALAADDTNNTEDIYLADVSGGSVRRVSLASD
                     GSGANGPSLGPSVNGNGTVVAFESLASNLVVADTNGADDVFWRR"
     gene            complement(2043..2411)
                     /locus_tag="VKX24_01325"
     CDS             complement(2043..2411)
                     /locus_tag="VKX24_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07150.1"
                     /translation="MLKRTLTAAMLAGGLLLAVPHAAFADGRHGGRDHDGRHSEHHDD
                     RGHDRDDYYRHHGYDDDYYSYYGYGCNGYRDGWYYGPDGRRDGYYHRNADCDDYYRHH
                     GSYYGSPSCDAYDYRSGYCG"
     gene            2666..3055
                     /locus_tag="VKX24_01330"
     CDS             2666..3055
                     /locus_tag="VKX24_01330"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ07151.1"
                     /translation="MIRVFLIDDTAEMRRLLEQVLSLDDFEVVGSAANGASALPLMAD
                     ADPDVVVLDYNMPGLDGLMTARLIMEERPDQPIILYTAYLDGDLERKAARAGIALCVE
                     KAEGILTLEDDIRRLAGRGPGSGDPPA"
     gene            3123..3263
                     /locus_tag="VKX24_01335"
     CDS             3123..3263
                     /locus_tag="VKX24_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07152.1"
                     /translation="MRKLKESVVRVRCPHCQAVVVLRHSVVRLGGRVALVCPECHEVT
                     VA"
     gene            complement(3273..>4180)
                     /locus_tag="VKX24_01340"
     CDS             complement(3273..>4180)
                     /locus_tag="VKX24_01340"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HLJ07153.1"
                     /translation="RALVNTCRHRGARVVEGRGQARRCLVCPYHSWTYDLAGRLTAQP
                     GAGDGFRGLDRADLGLRSLPVAEGHGLIFVRPPAPPAAGAAGNDGEPVDLDAVLAGLG
                     PELDSYKLASYHHVETRSHVQPCNWKFVVDTFLEAYHIFSLHKQSIAPQYFSTGALFD
                     AYGPHCRFIGVRRSILDLLGTPEESWSILPHATIHYVFAPNALLVHQLDHFELWRVFP
                     LGVDRCLVHTGIYAATPPDDERAQRRWRKNLDILLQVTTEEDFPQCRRIQADLAAGAA
                     DELIFGRNEPALAHFHRSLTAMLAG"
BASE COUNT          596 a         1388 c         1590 g          606 t
ORIGIN      
        1 cgtaggtcac gccctcccag gtgacggttc cggtcgtgct caccgtcggc gtgacgacgt
       61 tggcgtcggg gacgcggacc ttgtcggaga gcgctttcac gtcgtcggcg gtgaggcgga
      121 tgcggcgggc gctcgtgccg ccccggtcgc ggccccgggc gttgcgctcc gggatgacgt
      181 agagggcgtt ggtgccgagc gcccggatct ggttctggac gccgtcggag atcccggtgc
      241 ccaccgcgac cagcatgatc accgccgacg tcccgatcag gatgccgagc atcgtcagcg
      301 ccgaccggag gcggttggcc agcacccccc ggagggcgac gcggacgctg tcgagagtca
      361 tggccccaag cccctctcgt tgaccctgtc cgccggaacc ccagtgccag caacgattcc
      421 ggcgtttccg gctgaaccct agcagaaagt tgcgtcggct aactagtgaa actgtcgcca
      481 cgtgccctct tgcactcagt gacagttggg cttaggttca ccgggtagtc ccgaagcggg
      541 caagttgggg agcaggggcg gcgcaccccc cggcgtcacg cgtcgccggc cttcttccgc
      601 acggcgcacc gccggaaatg gaggcgatcc tatgggcctc gtcccgaaac gcgggctgac
      661 gatcggaatg ctggcgggaa cgctgctcgg aacatcggcg ctcggtgtcg cgccgccggc
      721 ctcggggtcg gcccccccgg ggtcggcggc gcccccgagg gccgcggcgg ccgccaccgc
      781 cctgctgtcg gtggcctccg acgggaccca cggcaacgcc gacagcttcg cccccagcct
      841 gtcggccgac gggtcgacgg tggccttcgc ctcgctggcc accaatttcg gcgctcccga
      901 ggcggtgcac gtggtcaacg tcttcctccg cgatcagcgg agcgggaaga cggagcggat
      961 cagcgaaggg ctcgggggcg ccgatgccga cggcgacagc aagagcccgt ccgtctcggc
     1021 cgacggctcg gtggtggcct tcgagtccag cgcctcgaac ctggtgcccg gcgacaccaa
     1081 cggcgcctcc gacgtcttcg tccgggaccg ggcctcgggg cggacgacgc tggtcagcgt
     1141 ggactcggcc ggcgcccagg gcaacgaggg gagcttcacg ccgtcgatct cggccgacgg
     1201 ccgctacgtg gccttcgcct ccgacgccac ggcgctggtg gacggcgacc acaaccgggc
     1261 ggaggacgtc ttcgtgcacg accggcggac gggcaagacc gtgaaggtca gcgtggcctc
     1321 cgacggcagg ccgggaaacg ggaacagcta cagcccggcg atctcggccg acgggcggtt
     1381 cgtggccttc gcctcggagg ccaccaacct ggtgcggggc gacaccaacg gcgccaccga
     1441 cgtcttcgtc cacgacctcg gctccgggcg cacgatccgg gtcagcgtgg cgtccaacgg
     1501 cgcccaggcc gagggcgacg ccttcacgcc gtcgatctcg ggagacgggc gctacgtggc
     1561 cttcatgagc gacgccggca acctccgggc cggcgacggc aacggggcct ccgacgtgtt
     1621 cgtccacgac ggcgaaaccg gccgcaccgt cctcgtcagc cggccgtccg gcgggcaccc
     1681 gtccgaccgc gggagcttcg agccctcgct gtcggtcgac ggccggtcgg tggccttcgt
     1741 gaccgacggg gcgctggcag ccgacgacac caacaacacc gaggacatct acctggccga
     1801 cgtctcgggc gggtcggtgc gccgggtgag cctggcgtcg gacgggagcg gcgccaacgg
     1861 cccgagtctc gggccgtcgg tcaacggcaa cggcacggtc gtggccttcg aatcgctggc
     1921 ctccaacctg gtggtggccg acaccaacgg cgccgacgac gtgttctggc gccgatgatc
     1981 gacaggacgc ggcacggcgg cggggccgcg accccgccgc catccgtcgc ccaccgggtg
     2041 gatcagccgc agtacccgga gcggtagtcg taggcgtcgc aggacggcga gccgtagtag
     2101 gagccgtggt ggcggtagta gtcgtcgcag tcggcgttgc ggtggtagta gccgtcgcgc
     2161 cggccgtcgg ggccgtagta ccagccgtcg cggtagccgt tgcagccgta gccgtagtag
     2221 ctgtagtagt cgtcgtcgta accgtggtga cggtaatagt cgtcacggtc gtgaccgcgg
     2281 tcgtcgtgat gttcggaatg ccggccgtcg tggtcccggc cgccgtggcg accgtcggcg
     2341 aaggcggcgt gggggacggc gaggaggagc ccgccggcca gcatggccgc ggtgagggtg
     2401 cgcttgagca tggtccatcc tttcctggga gtggaacggc gtggacgaac tcgtcgcgtc
     2461 tcccccagca aggaaccgga tctccgttgg ccctgtgaga cggaggacgt ttccgtcaac
     2521 cggcgcttac cctagtgcaa tcctggcact cagtgcaaat agctcgtagg tgacaattcg
     2581 ggcggatcag gaccgccggt cggacggggc ggacgggccc gacgctccac gacggaggac
     2641 ggaagggcgt gccatgatgc gggccgtgat ccgggtgttt ctgatcgacg acacggcgga
     2701 gatgcggcgg ctgctcgagc aggtgctgtc gctggacgac ttcgaggtgg tgggttcggc
     2761 ggccaacggc gcgtcggcgc tgccgctcat ggccgacgcc gatcccgacg tcgtcgtcct
     2821 cgactacaac atgcccggtc tcgacgggct catgaccgcc cgtctgatca tggaggaacg
     2881 gcccgatcag ccgatcatcc tctataccgc ctacctcgac ggcgacctcg agcggaaggc
     2941 cgcccgggcg ggcatcgccc tgtgcgtcga gaaggccgag ggcatcctga ccctggagga
     3001 cgacatccgc cggctggccg gccgcgggcc ggggtcgggc gacccgccgg cctgacccgg
     3061 ttcatctccg gctcatcgag gcgagggtat gaatggcctg tcggtacgaa ggcgaggtcg
     3121 ccatgcggaa gctcaaggaa tccgtggtcc gggtgcgctg cccgcactgt caggccgtcg
     3181 tcgtcctccg tcactcggtc gtccgcctcg gcgggcgcgt ggcgctggtc tgccccgaat
     3241 gccacgaggt gacggtggcc tgaccggcgc cctcagccgg cgagcatcgc cgtcagcgag
     3301 cggtggaagt gggccagcgc cggttcgttg cggccgaaga tcagttcgtc ggcggcgccg
     3361 gcggcgaggt cggcctggat ccgccggcac tgcgggaagt cctcctcggt cgtgacctgc
     3421 agcaggatgt cgaggttctt gcgccagcgg cgctgcgccc gctcgtcgtc gggcggggtg
     3481 gcggcgtaga tcccggtgtg gaccaggcag cggtcgacgc cgagcgggaa gacccgccac
     3541 agctcgaagt ggtcgagctg gtggacgagg agggcgttgg gggcgaacac gtagtggatc
     3601 gtggcgtggg gcaggatcga ccagctctcc tccggcgttc cgaggaggtc gaggatcgag
     3661 cggcgcacgc cgatgaagcg gcagtgcggg ccgtaggcgt cgaacagcgc gccggtcgag
     3721 aagtactgcg gggcgatgct ctgcttgtgg agcgagaaga tgtggtacgc ctcgaggaac
     3781 gtgtcgacga cgaacttcca gttgcagggc tggacgtggc tgcgggtctc gacgtggtgg
     3841 taggaggcga gcttgtagct gtcgagctcg gggccgaggc cggcgaggac ggcgtcgagg
     3901 tcgacaggtt cgccgtcatt gccggcggcg ccggccgccg gcggcgccgg gggccggacg
     3961 aagatcagcc cgtggccctc ggccaccggc agggaacgca gcccgaggtc ggcgcggtcg
     4021 aggccgcgga acccgtcgcc ggcgccgggc tgggcggtga gccggccggc gaggtcgtag
     4081 gtccaggagt ggtaggggca cacgaggcag cggcgggcct gcccccggcc ctcgacgacg
     4141 cgggcgccgc ggtggcggca ggtgttgacc agggcccggg
//
LOCUS       DATGJT010000077         2437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1150573, whole genome shotgun sequence.
ACCESSION   DATGJT010000077 DATGJT010000000
VERSION     DATGJT010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1150573"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="VKX24_01345"
     CDS             complement(<1..873)
                     /locus_tag="VKX24_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HLJ07154.1"
                     /translation="MTGPITASAPIGETGKSLTFSTGLLAPQADGAVVVSVGETTVLV
                     TAQASRGIREGIDFFPLTVDVEERMYAAGKIPGSFFRREGRPTEQAILACRLTDRPLR
                     PSFPKGYRNETQIVATVLGADLQNPHDVLVINGASAALMISGIPFAGPVGAVRLAHHD
                     GVWIPYPTYQEGDTSTFELVVAGRRLPDGDVAVMMVEAGGTEAAWELYQAGAPLVTEE
                     VIAEGLEESKRWINESITAQLQLVESWVTERGEIEPIPYELQTDYDEETYEAVRQAAS
                     GPLSDALSVADKHDR"
     gene            complement(1022..1279)
                     /gene="rpsO"
                     /locus_tag="VKX24_01350"
     CDS             complement(1022..1279)
                     /gene="rpsO"
                     /locus_tag="VKX24_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HLJ07155.1"
                     /translation="MPDTSATISEYRLHETDTGSPEVQIALLTERINMLTAHLKVHKK
                     DHHSRRGLLMLVGRRRRLLDYLRRNDVERYRALIARLGLRR"
     gene            complement(1412..2371)
                     /locus_tag="VKX24_01355"
     CDS             complement(1412..2371)
                     /locus_tag="VKX24_01355"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HLJ07156.1"
                     /translation="MHVVTSLDACPDPPAGTVVTIGAFDGVHLGHRALLRLVRDKANE
                     RGLPTALVTFDRHPAQVVRPESAPKLLTNLDQKLELLEATGLVDHAVVLTFDDQRRRE
                     SAEDFVTEVLDGCLRARLVVVGADFHFGNGRRGNVALLERMGRELGFDVVGLELVRAD
                     QGGAVTYSSTLVRRRLAEGDVRGAAEILGRDHEVRGTVVEGDRRGRELGFPTANVAVP
                     DEICLPAAGIYAGTFTGADGVARPTAISLGHRPTFYADQAHLLLEAYLLDFSGDLYGQ
                     AASVAFVERIRAEERFDSVEALVAAMHRDVEAARRVLTPRARP"
BASE COUNT          336 a          819 c          929 g          353 t
ORIGIN      
        1 gcggtcgtgc ttgtcggcga ccgacagcgc atcggacagc gggccgctgg ccgcctgcct
       61 gaccgcctcg taggtctcct cgtcgtagtc ggtctggagc tcgtagggga tcggctcgat
      121 ctccccccgc tcggtcaccc agctctcgac gagctgcagc tgggccgtga tgctctcgtt
      181 gatccagcgc ttggactcct cgaggccctc ggcgatgacc tcctcggtga cgaggggcgc
      241 accggcctgg tagagctccc aggccgcctc ggtgccgccg gcctcgacca tcatcaccgc
      301 cacgtcgccg tcgggcagcc gccggccggc cacgacgagc tcgaaggtcg aggtgtcgcc
      361 ctcctggtag gtgggatacg ggatccacac gccgtcgtgg tgggcgagcc gcacggcccc
      421 gaccggaccg gcgaagggga tgccggagat catgagggcc gccgacgccc cgttgatgac
      481 gaggacgtcg tgggggttct ggaggtcggc accgaggacg gtggcgacga tctgggtctc
      541 gttgcggtag cccttgggga aggacgggcg cagggggcgg tcggtgagcc ggcaggccag
      601 gatggcctgc tcggtgggcc gtccctcccg gcggaagaac gagccgggga tcttcccggc
      661 ggcgtacatc cgctcctcca cgtcgaccgt gagggggaag aagtcgatcc cctcccggat
      721 gccccggctg gcctgggcgg tgacgaggac ggtggtctcg ccgacggaca ccacaacggc
      781 gccgtccgcc tggggggcga gcaggccggt ggagaaggtg agggacttgc cggtttcccc
      841 gatgggggcc gacgccgtga tcgggccggt catggaactg ctcctctcgt cgctcttcgg
      901 atcagggcgg ggagccggtt cccagttggc atgctccggg gcccggagga tggcaactga
      961 caaccgactg cgccgccgcc gtaaaacgtt cgaggagcgg cgaaccgctc cccgaaggcc
     1021 gttaccggcg aagcccgagc ctggcgatga gcgcccggta cctctcgacg tcgttgcggc
     1081 ggaggtagtc gagcaggcga cgtctccggc cgacaagcat cagcagcccc cggcgggagt
     1141 gatgatcctt cttgtggacc ttcaggtgcg ccgtgagcat gttgatccgc tccgtgagga
     1201 gcgcgatctg aacctcgggt gagccggtgt cggtctcgtg gaggcggtac tcgctgatgg
     1261 tggcggaggt gtctggcatc gtcagattcg ttctcttccg gcaccggccg gtggctgggg
     1321 gccgtcgatg gatgggggtt caggtctgca gttacgcgtc agaacggagc gcgccagggc
     1381 gcgcaactcg ccgagcctac caccaggccc ctcagggccg cgcacggggc gtgaggaccc
     1441 ggcgggcggc ctccacgtcg cggtgcatgg ccgccaccag cgcctcgacc gagtcgaagc
     1501 gctcctcggc ccggatccgc tccacgaagg cgaccgaggc ggcctggccg tagaggtcgc
     1561 cggagaagtc cagcaggtag gcctcgagca ggaggtgggc ctggtcggcg tagaaggtcg
     1621 gccggtggcc gagggagatg gccgtcggcc gggcgacgcc gtcggcgccg gtgaacgtgc
     1681 cggcgtagat ccccgccgcc ggcaggcaga tctcgtcggg gacggcgacg ttggccgtcg
     1741 ggaagccgag ctcccggccc cggcggtcgc cctccaccac ggtgccccgc acctcgtggt
     1801 cccgtccgag gatctcggcc gccccgcgga cgtcgccctc ggcgaggcgt cggcggacga
     1861 gggtcgagga gtacgtcacg gcgccgcctt ggtccgcccg gacgagctcg agccccacga
     1921 cgtcgaagcc gagctcccgg cccatgcgct ccaggagcgc cacgttgccc cggcggccgt
     1981 tcccgaagtg gaagtcggcg ccgaccacca cgaggcgggc ccggaggcag ccgtcgagga
     2041 cctcggtgac gaagtcctcc gccgattccc ggcggcgctg gtcgtcgaag gtgaggacga
     2101 cggcgtggtc gacgaggccg gtcgcctcga gcagttcgag cttctggtcg aggttggtga
     2161 ggagcttcgg ggccgactcc ggccgcacga cctgggccgg gtggcggtcg aaggtcacga
     2221 gggcggtggg cagcccccgc tcgttcgcct tgtcccgcac caaccggagc agggcccggt
     2281 ggccgaggtg gacgccgtcg aaggcgccga tcgtgaccac ggtcccggcc ggcggatcgg
     2341 ggcaggcgtc gaggctggtg acgacgtgca cgacgccgtt ctaaccgttc gatccgccgg
     2401 cgaggaccac cagcggccgg gccgacgccc ggccttt
//
LOCUS       DATGJT010000078         3709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_529222, whole genome shotgun sequence.
ACCESSION   DATGJT010000078 DATGJT010000000
VERSION     DATGJT010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3709
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529222"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1165
                     /locus_tag="VKX24_01360"
     CDS             <1..1165
                     /locus_tag="VKX24_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="modification methylase"
                     /protein_id="HLJ07157.1"
                     /translation="VDPFMGSGTTLVEGLLRGGTTIGVDVDPLARLIARAKTTAVDPD
                     RIRSLAAELAAELAGELTGRWPGPSAELRPPMPDVDNFAHWFEPRQWARVQSLRDAIL
                     TLDCHDDERAFLLVVFSSILRWVSNADDQSQKTYVSGTRPKRPPAVDAVFWRFLDRAV
                     AGLAELERRRAPGADVRIPAGAGVDATDLGLPAASVDLAVTSPPYLDSVDYPYNMMLE
                     YFWLGPLLGVPDRRSFNALRRRPVGAKHPAEPEALPAALHDLVVLDALPPARRAAATT
                     YFALMERHLAEMARVLKPGARYVFVVGNSQTRLDMVPLHDALVRLAAGAGLGLERAFG
                     YRIRRHYMKFPRAGRGGIILIDWVLVFRNGAPAAAPGALPRPWLTLAPDAVAH"
     gene            complement(1168..1626)
                     /locus_tag="VKX24_01365"
     CDS             complement(1168..1626)
                     /locus_tag="VKX24_01365"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ07158.1"
                     /translation="MQRHPGLGHPRSCRPPLKRPVRARQRPLRVLVVDADEDRRDLIC
                     VEVSVLGHRAEEAWSTRQALVALAAEAFDVVIVDDQTPGFDALEVTELLLAATRPARR
                     RPAVVVVSADLDVPGRVALFRAGVVEVVSRPLSLAPLHGLLVRIDRALSW"
     gene            1730..>3709
                     /locus_tag="VKX24_01370"
     CDS             1730..>3709
                     /locus_tag="VKX24_01370"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HLJ07159.1"
                     /translation="MRRFLVLLVVATTLALPAVGAGAERPAYPPTRVRDVVEHLHGVD
                     VHDPYRWLEDGSSPEVQAWATDQNDFARRRLDKLPGRDWLAKRLHDVSYVDSFGVPRR
                     EGDRLFFLHRKPDQEKAVLYWRSGTDGVDHVLLDPNALSTPTAPVSLGDWIPAHDGRK
                     LAYTLHENNADEATLHVVDVAGGKDSAADRIRLYYDSLAWDAAGTGLYYTWSPTGAGV
                     TPADRAARADIRYHALGTDPARDAVVRPAVGDPNAYQGASASRDGHWLFASVGTFARN
                     DLYFKDLRVKSAAWRTLVAGVPAHFSVEAWKDRFYVTTDDGASRYRVLVAEPASPARS
                     QWKEIVPEAADAVLEDASIVGGRLALSYLRNAASGLEIRTLDGRPIRTVTLPGIGSSG
                     GLVGTPAEDQAFYSFSSFTEPPEIWRTSIARGGARLWARQVVPVDPKPYVVEQVFYPS
                     KDGTRIPMFLVHRKDLPRDGSTPFLLYGYGGFNLSMEPAFSAQLYPWLEAGGAYALAN
                     LRGGGEYGEDWHKAGELANKQHVFDDFIAAGEYLVGQHWTKPERLAIRGGSNGGLLVG
                     AVLTQRPDLFKAVICEVPLLDMVRYHRFGNGPAWVSEYGSADNEADFRWLYAYSPYHH
                     VTAGTAYPAVLMSSSDSDDRVDPLHARKMTAALQAA"
BASE COUNT          494 a         1472 c         1229 g          514 t
ORIGIN      
        1 ggtggatccc ttcatgggtt cgggcacgac gctggtcgag ggcctgctcc ggggcggcac
       61 gaccatcggt gtcgacgtcg acccgctggc ccggctcatc gcccgggcca agacgaccgc
      121 cgtcgacccc gaccgcatcc gctcgctggc cgccgagctg gccgccgagc tggctggcga
      181 gctgaccggc cgctggccgg gcccgtccgc cgagctccgg ccgcccatgc ccgacgtcga
      241 caacttcgcc cactggttcg agccccggca gtgggcccgg gtccagtcgc tccgcgacgc
      301 catcctgacc ctcgactgcc acgacgacga gcgggccttc ctgctcgtgg tcttcagttc
      361 catcctgcgc tgggtctcga acgccgacga ccagtcgcag aagacctacg tctcgggcac
      421 ccgcccgaaa cgtccgccgg cggtcgacgc ggtgttctgg cggttcctcg accgggccgt
      481 ggccggtctg gccgaactcg agcggcggcg ggcgcccggc gccgacgtcc gcatccccgc
      541 cggggccggc gtggacgcca ccgacctcgg cctgccggcg gcgtccgtcg acctggcggt
      601 cacctcaccg ccctacctcg actccgtcga ctacccgtac aacatgatgc tggagtactt
      661 ctggctcggg ccgctgctcg gcgtgcccga ccgccgcagc ttcaacgccc tgcgacgccg
      721 gccggtcggg gccaagcatc ccgccgagcc cgaggcgctg ccggccgccc tccacgatct
      781 cgtcgtcctc gacgctctgc cgccggcccg ccgggcggcg gccaccacct acttcgccct
      841 gatggagcgg cacctggccg agatggcccg ggtgctgaaa ccgggcgccc gctacgtctt
      901 cgtcgtcggc aacagccaga cccgcctcga catggtcccg ctccacgacg ccctcgtccg
      961 cctggcggcc ggcgccggcc tcggcctgga acgggccttc ggctaccgga tccggcgcca
     1021 ctacatgaag ttcccccggg ccggccgggg cgggatcatc ctcatcgact gggtgctggt
     1081 cttccgcaac ggcgcgccgg cggcggcgcc gggagcgcta ccccgcccct ggctcaccct
     1141 ggcgccggac gccgtcgcgc actgacctca ccacgacagc gcccggtcga tccgcaccag
     1201 caggccgtgg agtggggcca ggctcaaggg ccggctcacg acctcgacca cgccggcccg
     1261 gaacagcgcc acccggcccg ggacgtcgag gtcggcggag accaccacca ccgccggacg
     1321 ccggcgcgcc ggccgggtgg ccgccagcag cagttcggtc acctccaggg cgtcgaaccc
     1381 cggtgtctgg tcgtcgacga tgacgacgtc gaaggcttcg gcggccaggg ccacgagcgc
     1441 ctggcgggtg ctccaggcct cctccgcccg gtggccgagg acgctgacct cgacacagat
     1501 caggtcgcgc cggtcctcgt cggcgtcgac gacgagcacc cgcagcggac gctgccgggc
     1561 cctgacggga cgcttcagtg gaggtcggca cgaccgggga tggcccagcc cgggatgtcg
     1621 ctgcatgacc ggagccttct cggcccggct gtccgatccc tccccgttta agggggattt
     1681 tgcattgtcg cgacgttcac ggagattgtc gggctgcaag gatcgcgtca tgcgccggtt
     1741 cctcgtcctg ctcgtcgtgg ccaccaccct ggccctcccg gccgtcggcg ccggcgccga
     1801 gcggcccgcc tacccgccga cgcgggtccg cgacgtcgtc gagcacctcc acggcgtcga
     1861 cgtccacgac ccctaccgct ggctggagga cgggtcctcg cccgaggtcc aggcctgggc
     1921 gacagatcag aacgacttcg cccgccgccg gctcgacaag ctgcccgggc gggactggct
     1981 ggccaagcgg ctccacgacg tctcctacgt cgacagcttc ggggtgccgc gccgggaggg
     2041 cgaccgcctg ttcttcctgc accgcaagcc cgaccaggag aaggccgtcc tctactggcg
     2101 cagcggcacc gacggcgtcg accacgtcct cctcgatccc aatgccctct ccacgcccac
     2161 cgcgccggtg tcgctggggg actggatccc ggcccacgac gggcggaagc tggcctacac
     2221 gctgcacgag aacaacgccg acgaggccac cctgcacgtg gtggacgtcg ccggcgggaa
     2281 ggacagcgcc gccgaccgga tccggctgta ctacgactcg ctggcctggg acgccgccgg
     2341 caccgggctg tactacacgt ggtcacccac cggggccggc gtcaccccgg ccgaccgggc
     2401 cgcccgagcc gacatccgct accacgccct cggcaccgac ccggcccgcg acgcggtggt
     2461 gcggccggcg gtcggcgacc ccaacgccta ccagggggcc tcggcctccc gggacgggca
     2521 ctggctgttc gcctccgtcg gcactttcgc ccgcaacgac ctctacttca aggatctgcg
     2581 ggtcaagagc gccgcctggc ggacgctggt ggccggcgtc cccgcccact tctcggtcga
     2641 ggcctggaag gaccgcttct acgtcaccac cgacgacggc gcctcccggt atcgcgtcct
     2701 cgtggccgag ccggcctcgc cggcccgctc gcagtggaag gagatcgtgc ccgaggcggc
     2761 cgacgccgtc ctcgaggacg cctcgatcgt cggcggccgc ctcgccctct cctatctccg
     2821 caacgccgcc agcgggctcg agatccgcac gctcgacggg cgcccgatcc gcaccgtgac
     2881 gcttccgggg atcggctcct cgggcggcct cgtcgggacc cccgccgagg accaggcgtt
     2941 ctacagcttc agctccttca ccgagccgcc ggagatctgg cggacctcga tcgcccgcgg
     3001 cggcgcccgg ctgtgggccc gccaggtcgt ccccgtcgac cccaagccct acgtggtcga
     3061 gcaggtcttc tatccgtcca aggacggcac gagaatcccg atgttcctcg tccaccggaa
     3121 ggatctccca agggacgggt cgacgccgtt cctcctctac ggctacggcg gcttcaacct
     3181 cagcatggaa ccggccttct ccgcccagct ctacccctgg ctggaggcgg gcggcgccta
     3241 cgccctggcc aacctccggg gcggcgggga gtacggcgag gactggcaca aggccggcga
     3301 gcttgccaac aagcagcacg tcttcgacga cttcatcgcc gccggcgaat acctcgtcgg
     3361 acagcattgg acgaagcccg agcgcctggc catcaggggc ggctccaacg gcgggctgct
     3421 ggtcggcgcc gtcctcaccc agcggcccga cctcttcaag gccgtgatct gcgaggtccc
     3481 gctgctcgac atggtccgct accaccgctt cggcaacggg ccggcctggg tgtcggagta
     3541 cgggtcggcc gacaacgagg ccgacttccg ctggctctac gcctactcgc cctaccacca
     3601 cgtcacggcc ggcaccgcct acccggcggt cctgatgtcg tcgtccgact ccgacgaccg
     3661 ggtcgacccg ctccacgccc ggaagatgac ggcggcgctg caggcggcc
//
LOCUS       DATGJT010000079         2703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_217671, whole genome shotgun sequence.
ACCESSION   DATGJT010000079 DATGJT010000000
VERSION     DATGJT010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217671"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..884)
                     /locus_tag="VKX24_01375"
     CDS             complement(39..884)
                     /locus_tag="VKX24_01375"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020545032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HLJ07160.1"
                     /translation="MRDGPGDHAVLAAAIDALYERIGELAVGDPEAMATVDSAIDLLD
                     RGAVRVAEVGPDDEVVVHEWLKKAILLTFRLRAIERTEVGPFEYADRIPLKRGLAEAG
                     VRVVPGASARWGAYLAPGVVLMPSYVNIGAYVGEQTMVDTWATVASCAQIGARVHLSG
                     GVGIGGVLEPPGAVPVVVEDDAFVGSRCMVTGGARVGRGAVLGAGSFLDPSIPVIDAE
                     TGEELSRGVVPPWCVAIRASRRRQYPGGEFFIPCVLVIRRLTEGERHDKAGINELLRE
                     HGAST"
     gene            complement(893..2056)
                     /locus_tag="VKX24_01380"
     CDS             complement(893..2056)
                     /locus_tag="VKX24_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017620110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLJ07161.1"
                     /translation="MSGFEPPPYPYHRLGGAEALAGAHPGGMVDCSVGTPCDPPPGFV
                     VEAMARSGTERGYPESKGSAVLRRAAADWMARRFGVRVDESAISACVGTKEFVASAAQ
                     YLQLRSPERDVVLYPAVSYPTYAMGALLAGCRPVPVPPAGPDGSGLDLGALDPADASR
                     ALMLWTNSPSNPSGGTTDLGEAAAWGRERGVPVFSDECYCEFTWSGPPRSILEHGSDG
                     VVAVHSLSKRSNLAGVRVGFYAGDPALVAFLTDVRRHAGLMVPGPVQAAATAALGDDA
                     HVEDQRARYRERLAFLADLFESAGCPAPFPDGGFYLWVPAPAPMADGWELTESLARDG
                     GILVSPGDFYGTASDRYVRVAAVQPMERLALVRERLEQARRATTAPESAGRPR"
     gene            complement(2053..>2703)
                     /locus_tag="VKX24_01385"
     CDS             complement(2053..>2703)
                     /locus_tag="VKX24_01385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HLJ07162.1"
                     /translation="ALVGYTNAGKSTLLNRLTGAGVLTENRLFSTLDPRTRQLALPGG
                     ETVLVTDTVGFVRKLPHQLVEAFHSTLQSIGLADLVVHVVDGSARDPEAQMAAVRGVL
                     AEIGAADIPELVVVNKLDRARDAGLLLARHEGAVGISALAGVGIDGFLRAVADRLRMS
                     DRVVRLTIPYARGDVLAAVHREGEVVEQEAGEEATTLTVLLDEAGRARFSEFVAAS"
BASE COUNT          378 a         1024 c          991 g          310 t
ORIGIN      
        1 cgcgaccaac tcggccgtgg cggccaagag gtcgcggctc acgtgctcgc cccgtgctcc
       61 cgcagcagct cgttgatgcc cgccttgtcg tgccgctcgc cctcggtcag tcgtctgatc
      121 acgaggacgc aggggatgaa gaactctccc cccgggtact ggcggcgccg gctcgcccgg
      181 atggccacgc accagggcgg cacgaccccc cgggacagct cctcccccgt ctcggcgtcg
      241 atgaccggga tcgaggggtc gaggaagctg ccggcaccga gcaccgcccc ccggcccacc
      301 cgggccccgc cggtcaccat gcaccggctc ccgacgaagg cgtcgtcctc caccacgacc
      361 ggcaccgcac cgggcggctc gagcacgccg ccgatcccga cgcccccgga gaggtggacc
      421 cgggcgccga tctgggcgca ggaggccacc gtggcccaag tgtcgaccat cgtctgctcg
      481 cccacgtagg cgccgatgtt cacgtagctc ggcatgagca cgacgccggg ggcgaggtag
      541 gcgccccacc gggccgaggc gccgggaacg accctcacac cggcctcggc caggccccgc
      601 ttgagcggga tgcggtcggc gtactcgaag gggccgacct cggtccgctc gatcgcccgc
      661 agccggaagg tcaacaagat ggccttcttc agccactcgt gcacgacgac ctcgtcgtcg
      721 ggcccgacct cggccacccg caccgccccg cggtcgagca ggtcgatggc ggagtcgacc
      781 gtggccatcg cctccgggtc gccgaccgca agctcgccga tgcgttcgta gagggcgtcg
      841 atcgccgccg ccaggacggc gtggtccccc gggccgtcgc gcatggccaa ccctaacggg
      901 gccggccggc ggactcgggt gccgtcgtcg cccggcgcgc ctgctccagc cgctcgcgca
      961 cgagggccag gcgctccatc ggctggacgg cggcgacccg gacgtagcgg tcgctcgccg
     1021 tgccgtagaa gtcgcccggg ctcaccagga tgcccccgtc ccgggcgagc gactcggtca
     1081 actcccagcc gtcggccatg ggggcaggtg cgggcaccca gaggtagaag ccgccgtcgg
     1141 ggaacggcgc ggggcacccg gccgactcga acaggtcggc gaggaacgcg agccgctccc
     1201 ggtagcgcgc ccgctggtcc tcgacgtggg cgtcgtcgcc cagcgcggcg gtggcggccg
     1261 cctgcaccgg gcccggcacc atgagcccgg cgtggcggcg gacgtcggtc aggaacgcga
     1321 cgagcgccgg gtcgccggcg tagaagccga cgcggacccc ggccaggttg gaccgcttgg
     1381 acagcgagtg cacggcgacc accccgtcgg acccgtgctc gaggatgctc cgcggcggcc
     1441 ccgaccaggt gaactcgcag tagcactcgt cggagaagac cgggaccccc cgctcgcgcc
     1501 cccaggccgc cgcctcgccg aggtcggtcg tcccgccgct cgggttcgac gggctgttcg
     1561 tccagagcat gagcgccctc gaggcgtcgg ccgggtcgag cgcaccgagg tcgagcccgg
     1621 agccgtccgg gcccgccggc gggaccggga ccgggcgaca ccccgccaag agcgcgccca
     1681 tggcgtaggt cgggtaggac acggccgggt acaagaccac atcgcgttcg ggcgagcgca
     1741 gttgcaggta ctgggcggcc gaggcgacga actccttggt gccgacacag gcgctgatcg
     1801 ccgactcgtc gacccggacg ccgaagcgcc gggccatcca gtccgccgcc gcccgccgga
     1861 ggacggcact gcccttggac tccgggtagc cgcgctcggt gcccgagcgg gccatggcct
     1921 cgacgacgaa gccgggcggc gggtcgcagg gggtgccgac cgagcagtcg accatcccgc
     1981 cggggtgcgc accggccagg gcctcggccc cgccgagccg gtggtacggg tagggcggcg
     2041 gctcgaaacc gctcacgacg ccgccacgaa ctcggagaac cgggcgcgcc cggcttcgtc
     2101 gaggaggacg gtcagggtgg tcgcctcctc gcccgcctcc tgctcgacca cctccccctc
     2161 gcggtggacg gccgccagca cgtcgccccg cgcgtagggg atggtgagcc gcaccacccg
     2221 gtcgctcatg cgcagccggt cggcgacggc gcggagaaag ccgtcgatgc ccaccccggc
     2281 gagcgccgag atcccgaccg cgccctcgtg cctggcgagc agcaggcccg cgtcccgggc
     2341 acggtcgagc ttgttcacga ccacgagctc ggggatgtcg gcggccccga tctcagccag
     2401 caccccccgg accgcggcca tctgggcctc ggggtcgcgg gcggacccgt cgacgacgtg
     2461 gaccacgagg tcggccaggc cgatcgactg gagcgtcgag tggaaggcct cgacgagctg
     2521 gtggggcagc ttgcgcacga agccgacggt gtcggtgacg agcaccgtct caccgccggg
     2581 cagggccagc tggcgcgtcc tcgggtcgag ggtcgagaac aaccggttct cagtgaggac
     2641 tcccgccccg gtgaggcggt tgaggagcgt ggacttgccg gcgttggtgt agcccacgag
     2701 cgc
//
LOCUS       DATGJT010000080         2903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1462290, whole genome shotgun sequence.
ACCESSION   DATGJT010000080 DATGJT010000000
VERSION     DATGJT010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462290"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..815
                     /locus_tag="VKX24_01390"
     CDS             <1..815
                     /locus_tag="VKX24_01390"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HLJ07163.1"
                     /translation="GSVVRAVAIGNRLPTVLVGAEQSGVAVPSFNGFTFFDGADGDPK
                     SEPHRLHEAFLHFGDAVLDDPVAAAMPASERATVNAVRAIQKLGDPKAGEGHQPPARP
                     TNAPATLADQVDMAVKLLASDLGIEIAMVSLAGFDNHASEKTMHPKLLTEVDNAVDRF
                     ATAAAATGKPADYLLMTFSEFGRRVEEDGSAGTDHGTAAPMFVVGDAVAGGLYGQQPS
                     LTNLDNNKNLIRSVDFREVYATVLDGWLRKVPAADVLNTKPSDGLHPIGFLR"
     gene            812..1180
                     /locus_tag="VKX24_01395"
     CDS             812..1180
                     /locus_tag="VKX24_01395"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ07164.1"
                     /translation="MRRLAAAALGLAVAGMIVPAPARAASPTTYQDLVVGFTFVVGSA
                     TLNAPGQMLRIHTGDNVEWTNLDPVSHSVAFDVMPTTLYLKKPGDKARIAFTQAGYYT
                     YRCNEHPQAPGMKGLVFVTD"
     gene            1280..1792
                     /locus_tag="VKX24_01400"
     CDS             1280..1792
                     /locus_tag="VKX24_01400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07165.1"
                     /translation="MFTRRLAALLCLSGGVFVALALPAGAASNLVQQKTVAGLHGRSG
                     TAQRFAVNGVSSVTLSGNDPDGAGGLCTETWVDYSTKPHKHFNPAVLVNCSGTTKSVA
                     GILTTPYGGISGIGVVVCEVPNTSGPIVRTSANCKGSLSAMYLHSGKPYSSFQVTAVS
                     FPDGVIVRRV"
     gene            1803..2288
                     /locus_tag="VKX24_01405"
     CDS             1803..2288
                     /locus_tag="VKX24_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07166.1"
                     /translation="MNRPPHVLAGLRRTVVAAGAAVVLAVGGGLATPASAAPAAGGAP
                     AASSASQMSLRPTSTCPQDAVDQLSKAIRFIQGQTWADRPGATSVNISPDLIACQVTL
                     NVGHLSKHEEAALEAGAGPRLSIVHRRDYAKPSRILLILWVVFGGSGLIWLWRRYLRQ
                     A"
     gene            complement(2290..>2903)
                     /locus_tag="VKX24_01410"
     CDS             complement(2290..>2903)
                     /locus_tag="VKX24_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015620782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07167.1"
                     /translation="GAGFEVRAEADGGGLAEAVIEFHPDLAILDVRLPNGDDGYGLAR
                     RLRTMAEIPIVFVTAADGLDDRLRGFEVGADDYLVKPFAASELLARVRAVLRRSGRLT
                     SPTHQIFDLLVDEASRTAARGGTDLGLTRTEFDLLAVLSRAPGKVFSKTQLLSLVWGF
                     DGYDNNLVEVHISALRRKLEAHGGRLIHTERGEGYVFRSPAPG"
BASE COUNT          427 a         1081 c          989 g          406 t
ORIGIN      
        1 gcggcagcgt ggtgcgggcg gtggcgatcg ggaaccggct gccgaccgtg ctggtcgggg
       61 cggagcagag cggcgtggcc gtgccgtcgt tcaacggctt cacgttcttc gacggtgccg
      121 acggcgaccc gaagtcggag ccccaccgcc tccacgaggc cttcctgcac ttcggcgacg
      181 cggtgctcga cgatcctgtc gccgcggcca tgccggccag cgagcgggcc accgtcaacg
      241 ccgtgcgggc catccagaag ctcggcgacc ccaaggctgg ggagggtcac cagcctcccg
      301 cacggccaac gaacgcgccg gccacgctgg ccgaccaggt cgacatggcg gtgaagctgc
      361 tggcctccga cctcggcatc gagatcgcca tggtgtcgct ggccgggttc gacaaccacg
      421 cctccgagaa gaccatgcac ccgaagctgc tgaccgaggt cgacaacgcc gtcgaccgct
      481 tcgccaccgc cgcggccgcc accggcaagc cggccgacta cctcctgatg acgttctcgg
      541 agttcggacg gcgcgtcgag gaggacggca gcgccggcac ggaccacggc acggccgccc
      601 cgatgttcgt cgtcggcgac gccgtggccg gcggcctcta cggccagcag cccagcctga
      661 ccaacctcga caacaacaag aacctgatcc gctccgtcga cttccgggag gtgtacgcca
      721 cggtgctgga cggctggctg cggaaggtgc cggcggccga cgtcctcaac acgaagccgt
      781 cggacgggct gcacccgatc gggttcctcc ggtgaggcgc ctggccgccg cggccctggg
      841 actggccgtc gccgggatga tcgtcccggc gccggcgcgg gcggcgtcgc ccacgaccta
      901 ccaggacctc gtcgtggggt tcacgttcgt cgtcggctcc gccaccctca acgccccggg
      961 ccagatgctg cggatccaca ccggagacaa cgtcgagtgg accaacctcg atcccgtctc
     1021 ccacagcgtg gccttcgacg tcatgccgac gacgctgtac ttgaagaagc cgggagacaa
     1081 ggcccggatc gcctttaccc aggccggcta ctacacctac cgctgcaacg agcacccgca
     1141 ggcgccgggg atgaagggcc tggtgttcgt gaccgactga tcgccattcg ggaggatttc
     1201 cgccacttcg tcacgaatca ggaagtacgg ggcggtttgc gccctaggcc ccgattccgc
     1261 ttcgcgacaa ggagttggcg tgttcacccg tcgcctcgct gccctgctct gcctctctgg
     1321 cggagtcttc gtcgccctgg cgctccccgc cggggcggcg tccaacctcg tccaacagaa
     1381 gacggtcgcc gggctgcacg gccggtcggg gacggcgcag cgcttcgccg tcaacggcgt
     1441 cagcagcgtc acgctgtcgg gcaacgaccc cgacggcgcc ggcggcctgt gcaccgagac
     1501 ctgggtcgac tacagcacca agccccacaa gcacttcaac cccgccgtgc tggtgaactg
     1561 ctccgggacc accaagtcgg tcgccgggat cctcaccacc ccctacggcg gcatcagcgg
     1621 catcggcgtc gtggtctgcg aggtgccgaa cacgtccggc ccgatcgtcc gcaccagcgc
     1681 caactgcaag ggcagcctgt cggcgatgta cctgcactcc gggaagccgt actcctcgtt
     1741 ccaggtcacg gcggtctcgt tccctgacgg tgtgatcgtc cggagggtct gacgccatgc
     1801 acatgaaccg gcccccccac gtcctcgccg gtctgcgacg caccgtcgtg gccgccggtg
     1861 cggccgtcgt cctcgccgtg ggcggcggcc tggccacgcc ggcgtcggcc gccccggccg
     1921 ccggcggggc gccggcggcg agctccgcat cgcagatgtc gctgcggccc acgtccacct
     1981 gcccccagga cgccgtcgac cagctcagca aggccatccg gttcatccag gggcagacct
     2041 gggccgaccg gcccggggcc acgtcggtga acatcagccc cgacctcatc gcctgccagg
     2101 tgaccctcaa cgtcggccac ctgagcaagc acgaggaagc ggccctggag gcgggcgccg
     2161 gcccgcgtct gtccatcgtc caccggcggg actacgccaa gccctcccgg atcctcctga
     2221 tcctgtgggt cgtcttcggc ggttcggggc tcatctggct ctggcgccgc tacctccgcc
     2281 aggcgtgagt caacccgggg cgggggaccg gaacacgtag ccctcgcccc gctcggtgtg
     2341 gatgagccgc cctccgtggg cctcgagctt gcggcgcagc gccgagatgt ggacctcgac
     2401 gaggttgttg tcgtagccgt cgaagcccca caccagcgac agcagctggg tcttggagaa
     2461 caccttgccc ggcgcccggc tgagcacggc caggaggtcg aactccgtcc tcgtcaggcc
     2521 gaggtcggtg ccgccccggg cggcggtgcg gctggcctcg tcgacgagga gatcgaagat
     2581 ctgatgcgtc ggcgacgtca gccggccgga gcggcgcagc accgcccgca cccgggccag
     2641 gagctcggag gcggcgaagg gcttcaccag gtagtcgtcg gcgccgacct cgaagccccg
     2701 cagccggtcg tcgaggccgt cggcggcggt gacgaagacg atcgggatct cggccatcgt
     2761 ccgcagccgc cgggccaggc cgtagccgtc gtcgccgttg gggaggcgga cgtcgaggat
     2821 ggccaggtcg gggtggaact cgatcacggc ctcggcgagg ccaccgccgt cggcctcggc
     2881 ccgcacctcg aagcccgccc ccc
//
LOCUS       DATGJT010000081         3115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_840241, whole genome shotgun sequence.
ACCESSION   DATGJT010000081 DATGJT010000000
VERSION     DATGJT010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3115
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_840241"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VKX24_01415"
     CDS             complement(<1..401)
                     /locus_tag="VKX24_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07168.1"
                     /translation="MDLYFKVPPNWKIFNTNQVLVAQNGKLGPTQEKQIANGEWIATM
                     SNRPGVTAKQASFSIGSRFPAATVLVRPLGQSERDSMNFSTMRSLLLNADPLTASSGY
                     EVLNYKEFTLPGGIRGIKMIVNITSGSPVLT"
     gene            complement(856..1812)
                     /locus_tag="VKX24_01420"
     CDS             complement(856..1812)
                     /locus_tag="VKX24_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007730875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HLJ07169.1"
                     /translation="MPLGSWPTPLESAPRLGAELGFAPGVLSLKRDDLTGLGGGGNKV
                     RKLEYLCAAAVARGATMLVTSGRIQSNHARLTASAASRLGLECVLVLAGEPPPKLSGN
                     LTLESILGARIVWAGPANDAQLEATVQDVASDAAASGAVVDVIPLGGSSALGARGYME
                     CGRELEAQVPGLRLVVVALGTGGTMAGLVAALGADRVLGVDVGATADAPARVARLVCE
                     LGGGPADAGSLRIRSDQVGEGYGVLTPAASRAMSAAARLEGVFLDPVYTAKAMSGLAA
                     AVADGSISPGDPTVFVHTGGLPGLFGHPALTDPEALRLLAQS"
     gene            2004..2600
                     /locus_tag="VKX24_01425"
     CDS             2004..2600
                     /locus_tag="VKX24_01425"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HLJ07170.1"
                     /translation="MRHGETQRVESESGIANPGLTEAGHDQAKRLAAWMAAHDRVDAL
                     AVSPLLRARQTAEPLAAALGLDAVVVDELAEFDAASSSYIPMEEMRSTQHPRLRAMVE
                     GRWDEFGAPVEPEVFRSTIVRTLDRLAATHPGQQVAVVCHGAVINAYLGDVIGTPRLL
                     WFEPRYTSLSRVLVSRGGVRSVESMNELPHLEPGELRP"
     gene            2809..>3115
                     /locus_tag="VKX24_01430"
     CDS             2809..>3115
                     /locus_tag="VKX24_01430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07171.1"
                     /translation="MVQQLTRRASSPPEPVAVAPVTRPVVFLAWGSIAGRSQEIAGAI
                     GGTARCFFPIGSRRPTVLARYLISSIATGAHLLRRRPRLVIVTNPPVPGALVTYLWAR
                     "
BASE COUNT          465 a         1120 c         1081 g          449 t
ORIGIN      
        1 aacgtgagga ccggcgaacc gctcgtgatg ttgacgatca ttttgatgcc gcggatgcct
       61 cccggcaggg tgaactcctt gtagttcaag acctcatatc cggaggacgc cgtcagggga
      121 tcggcgttca gcagcagtga acgcatcgtc gagaagttca tcgagtcacg ctccgattgc
      181 ccgagcggac gcacgagaac ggtcgccgcc gggaagcggg agccgatgct gaaggaggcc
      241 tgcttcgccg tcacccccgg gcggttggac atcgtcgcga tccactcacc attggcgatc
      301 tgcttctcct gggtcggccc gagcttgccg ttctgggcga cgagaacctg gttggtgttg
      361 aagatcttcc agttcggggg gaccttgaag tagaggtcca ccccgtcgga ggaccggtgg
      421 ctgacgtact ggaaactcga gcccacctgg catccggcga ggaccagggc gagggacagt
      481 ggcgcggaca ggaccagagc acggccgagc cgcgtgacga ggcccctcgg gccgcctccc
      541 ggtcctcctg acctgggcat cccagcaccc gtcttcaagg ctgccagcgt aggccagccg
      601 tccgggacgg cggcaccgac cgctccggga agagtccagc tagggatcgg cgaaggagaa
      661 gattcgtcac ttcgtaacgc tccgacgcgg ccacctcagc ccgacggcca ctgccgcgct
      721 ccgcaccgcg cgagcgacgc cggagacttg cgacctcccc gtcctgccgc gacccccacc
      781 gatcggcact gtcacgtttc tcatacgttg ccggggagcc gatggcttgc gctgggccga
      841 tggacccaac ggggatcagg actgggcgag gagccgcaag gcctcagggt cggtcagggc
      901 cgggtgacca aacagcccgg gcagcccgcc ggtgtgaacg aagacggtcg ggtcgcccgg
      961 tgatatcgaa ccgtcggcca cggcggccgc gagcccgctc attgccttcg ccgtgtacac
     1021 cggatcgagg aagaccccct ccagcctggc ggccgccgac atggccctcg aagcggccgg
     1081 ggtgagcacg ccatagccct ccccgacctg gtcggaccgg atgcggaggg agccggcgtc
     1141 ggccggcccg cctccgagct cgcacaccag gcgcgccacc ctcgccgggg catcggcggt
     1201 cgccccgacg tcgacgccga ggacccgatc ggcacccagc gccgccacca gcccggccat
     1261 cgtccccccg gtcccgagcg ccacgacgac gagccggagg cccggaacct gagcttcgag
     1321 ctccctcccg cactccatgt agccccgggc gccgagtgcg ctcgagcccc ccaacgggat
     1381 gacatccacg accgcccccg acgccgctgc gtcggaggcg acgtcctgga ccgtggcctc
     1441 cagctgggcg tcgttagcgg gcccggccca cacgatcctc gccccgagaa tggattcgag
     1501 ggtgaggttt cccgagagtt tcggtggcgg ctcccccgcc aggacgagga cgcactcgag
     1561 tccgagtcgc gaggcggccg aagcggtgag ccgagcgtgg ttgctctgga tccggccgct
     1621 cgtgacgagc atcgtcgcgc ctcgggcgac ggccgcggcg cagaggtact cgagcttcct
     1681 caccttgttc ccaccgccgc cgaggccggt caggtcgtcg cgcttgagcg agagcacgcc
     1741 tggcgcgaag ccgagttcgg cgcccaagcg gggtgcggac tcgagaggag tgggccagga
     1801 gccgagcggc agtcggtccg tcctcggctc aggtgttgct cgcccgccca cctggtcatc
     1861 ttgcctctcc gcacgccgca cgggcacggg gagtgagagc ccggggcggt gatcgacggt
     1921 gaccggactc ggcccagcca gggtcgagca cgcccgaccc tccggccacc ccgggttagc
     1981 gttcgggcgt gcagttggtg ctggtgcggc atggtgagac tcagcgcgtg gagtccgagt
     2041 ccgggatcgc gaaccccggg ctgaccgagg ccggacacga tcaggccaag cggctggcgg
     2101 cgtggatggc cgcgcacgat cgggtcgacg ccctggccgt cagcccgctc ctgcgggccc
     2161 gtcagacggc agaacccttg gccgccgctc tcggcctcga cgcggtcgtg gtggacgagc
     2221 tggccgagtt cgatgccgcg tcgtccagct acatcccgat ggaagagatg cggtcgaccc
     2281 agcacccgag actgagagcg atggtcgagg gtcgttggga cgagttcggc gcgcccgtcg
     2341 agcccgaggt gttccggtcg acgatcgtcc ggacgctcga tcgcctggcg gccacgcacc
     2401 cgggccagca ggtggcggtc gtgtgccacg gcgcggtcat caacgcctat ctgggggatg
     2461 tgatcggcac cccccggctt ctgtggttcg aaccccggta cacctccctc agccgggtcc
     2521 tcgtgtcgag gggcggggtc cgctccgtcg agtccatgaa cgagctgccc cacctcgaac
     2581 ccggcgagct tcggccctga gccggtggtc ggagggaccc cggcctcgtg gtggtcccgc
     2641 ccctggccca acacccagcg gccccacctc acctgaactc ccaggtcaac gccctcatcc
     2701 cacgggcatc gttgcctcgc cgcgctaatc ggggcgtccc accagcgtct cagcgcgtga
     2761 ggaacgccca gggacgaggt gcagacggcg gcgtgggaca acgggtgggt ggttcagcag
     2821 ctcacgaggc gagcgagcag ccctcccgag cccgtagcgg tggcgccggt cacccgaccg
     2881 gtggtcttcc tcgcctgggg gtcgatcgcg ggccggtcgc aggagatcgc cggcgccatc
     2941 ggggggacgg cgcgctgctt cttccccatc gggtcccgtc gccccacggt gctcgcccgc
     3001 tacctgatct cctcaatcgc caccggggcc cacctcctgc gccggcggcc gaggctcgtg
     3061 atcgtcacca accccccggt gcccggtgcg ctcgtgacct acctctgggc ccggc
//
LOCUS       DATGJT010000082         2157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1462446, whole genome shotgun sequence.
ACCESSION   DATGJT010000082 DATGJT010000000
VERSION     DATGJT010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462446"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VKX24_01435"
     CDS             <1..712
                     /locus_tag="VKX24_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011290723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HLJ07172.1"
                     /translation="NRPEARNSMNKAAAEAMGAALDRLDAEPDLSVGVITGAGKGFSA
                     GMDLKGFAAGEFPVAGDRGFAGIAQRSARKPLIAAVEGFALAGGLEIALACDVIVASR
                     EAKLGIPEVGVGLFAGAGALLRLPRRVGQGQAALLALTGKPISGEEGHRIGLVDRAVE
                     PGTALDEALALAQTIAANAPLALAASKAVLVGGFTKPDAEFWEWQQQFFSEVFSSKDA
                     LEGARAFAEKRPPNWQGA"
     regulatory      843..925
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01786"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class II; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01786"
     gene            949..1638
                     /locus_tag="VKX24_01440"
     CDS             949..1638
                     /locus_tag="VKX24_01440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07173.1"
                     /translation="MRVLLSSVAQECESGSELVQDGGVDYAPPRRRLSTGAHAEFVGA
                     LVREFRASLASLQGASDLLVRRRHDLDEDVVADLGTVIDRQGARVAWLVRLLEAVDGD
                     GATRRVETVNGPTVARQAAAACGLPLHIGPGADRDRDVFPGDPERVRLGLEILFQAMA
                     PPAAAAAAGLGAGGVVTVVAPVLDLDEPQRRFALRAAFRVLDTEGCPLRVRRVGGETR
                     AEVRLGPRKAR"
     gene            complement(1643..>2157)
                     /locus_tag="VKX24_01445"
     CDS             complement(1643..>2157)
                     /locus_tag="VKX24_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07174.1"
                     /translation="GSVELYDDLRRRLEAGQPVAVVIAEIQGLRPFTRHYGFARGERL
                     VGAVAELLLELTRLEPEGLAGRLGAQDFMALVEPARAQDFTAGLHSAFGARRSSFYDP
                     VDVLRGWIDVTDRAGRNHRHRPVRLAVGVASSEPPHSLHHLDLLEQAAELARYAGGAG
                     NGPVAFDRRA"
BASE COUNT          260 a          785 c          837 g          275 t
ORIGIN      
        1 caaccgcccg gaggcccgca actcgatgaa caaggcggcc gccgaggcca tgggcgcggc
       61 cctcgaccgg ctcgacgccg agcccgacct ctcggtcggc gtgatcacgg gcgccggcaa
      121 ggggttcagc gccgggatgg acctgaaggg cttcgccgcc ggcgagtttc ccgtcgccgg
      181 cgaccggggc ttcgccggca tcgcccagcg ttcggcccgc aagccgctga tcgccgccgt
      241 cgagggcttc gccctggccg gagggctcga gatcgccctg gcctgcgacg tgatcgtggc
      301 ctcccgggag gccaagctcg gcatccccga ggtcggcgtc gggctcttcg ccggcgccgg
      361 cgccctcctg cggctcccgc ggcgcgtcgg ccaggggcag gcggcgctgc tggccttgac
      421 cggcaagccg atcagcggcg aggaggggca ccggatcggc ctcgtcgacc gggccgtcga
      481 acccggcacg gcgctcgacg aggcgctggc cctggcgcag accatcgccg ccaacgcccc
      541 gctggcgctc gccgcctcca aggccgtgct ggtcggcggc ttcaccaagc ccgacgccga
      601 gttctgggaa tggcagcagc agttcttctc cgaagtcttc tcctccaagg acgccctgga
      661 gggggcgcgg gccttcgccg agaagcggcc gccgaactgg cagggggcct gatccgcaaa
      721 cccaatccgc acaaagggtc tgcggcttca tcgccagacg gccgacatgc cgagaacgcc
      781 gggttcgggc cgtcgacggc gtcgcgcccg gggcctacgg tcgatcgagc gaacagaagc
      841 cgtcggtgtg tggaggcgat gaccctccgt ccgtaggtgg tcacgtggac gggggcgagc
      901 cagtcgtgaa cccacccctc gccgaccccg gtcgtccgga ggtcgtcggt gcgcgtgctg
      961 ctttcgtcgg tggcgcagga atgcgagtca ggttcggagc tggtgcagga cggcggcgtc
     1021 gactacgccc cgccccgccg ccggctgtcg accggcgccc acgccgagtt cgtgggtgcg
     1081 ctggtccggg agttccgggc ctcgctggca tcgctgcagg gcgccagcga cttgctggtc
     1141 cgccgccgcc acgacctcga cgaggacgtc gtcgccgacc tcggcacggt catcgaccgg
     1201 cagggcgccc gggtcgcctg gctggtgcgg ctgctcgagg cggtggatgg ggacggtgcg
     1261 acccggcggg tcgagaccgt caacggtccg acggtcgccc ggcaggcggc ggcggcctgc
     1321 ggcctgccgc ttcacatcgg ccccggcgcc gaccgggacc gcgacgtctt ccccggcgac
     1381 ccggagcggg tccggctcgg gctcgagatc ctgttccagg ccatggcccc gccggccgcg
     1441 gcggccgccg ccggcctggg ggcgggcggc gtcgtcaccg tggtggcgcc ggtcctcgac
     1501 ctcgacgagc cgcagcggcg cttcgccctc cgggcggcgt tccgggtcct cgacaccgag
     1561 ggctgcccgc tgcgggtgcg gcgcgtcggc ggggagaccc gggccgaggt ccgtctcggg
     1621 ccccgcaagg cccggtagcg ggtcaggctc ggcggtcgaa ggccacgggg ccgttgccgg
     1681 cgcccccggc gtagcgggcc agctccgccg cctgctccag caggtcgagg tggtggaggc
     1741 tgtggggcgg ttcgctgctg gcgacgccga cggccagccg caccggccgg tgacggtggt
     1801 tccggccggc ccggtcggtg acgtcgatcc agccccgcag gacgtcgacc gggtcgtaga
     1861 acgacgaccg gcgggcgccg aaggcggagt gcaggccggc ggtgaagtcc tgtgcccggg
     1921 ccggttcgac gagggccatg aagtcctgag cgccgaggcg gccggccagg ccctcgggct
     1981 cgaggcgggt gagctccagc agcagctcgg ccaccgcccc gacgaggcgc tcgccccggg
     2041 cgaagccgta gtgccgggtg aacggacgta aaccctggat ctcggcgatg acgacggcca
     2101 ccggctggcc cgcctcgagg cggcggcgga ggtcgtcgta gagctcgacg ctgccga
//
LOCUS       DATGJT010000083         2037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_944494, whole genome shotgun sequence.
ACCESSION   DATGJT010000083 DATGJT010000000
VERSION     DATGJT010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944494"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2037
                     /locus_tag="VKX24_01450"
     CDS             <1..>2037
                     /locus_tag="VKX24_01450"
                     /inference="COORDINATES: protein motif:HMM:NF013256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HLJ07175.1"
                     /translation="VAVVPHTHWDREWYEPFEIFRMRLVDTLDALVELMESDPSYGWF
                     LLDGQMAAVDDYLEIRPQATGRLRELAASGRIAVGPWYVLMDEFLVSGETMVRNLQMG
                     MERAAEFGGAMDVGYLPDMFGHIAQMPQILSEAGLEHAVVWRGVPSAIDRSAFWWFAP
                     DGSKVRAEYLTTGYSNAATLPDDAASLVQRVTAYEKDEAPFLLDGILYMNGSDHLPPQ
                     PFLGRVVAEANELQDDYAFRITSLPDYLAKAPVEGLPSWHGELRSGFRANMLMGVTSN
                     RVDVKRAAAAAEIAIERRAEPYSALFCPPGEWPGRLLELAWLNVVRNAAHDSICACSV
                     DGVVDAVLERFAETRRVGEGLAERALVSLAGSMQKAGPVVVNAATRPRSGIVEVVVAG
                     ASGDAAREQVLSTHSSLPGTLTLDAATFTSILGVLEGTRISDDAWIHDVGVEEDETGI
                     DVVVSVGTEEMPGIPVDALKGNLFARLAARPDAVVRVTLDQPPVRQVVARVADVPGLG
                     WAAYEPAALEHPVTARVAAPGEGPAGFVVLENGIVTVVVDAGDGTFSMNGHAGLGRLV
                     DGGDIGDSYNYSPPHTDTVVSVPESVRVEVVEEGPVRAGALVTAEYRWPADADPVAST
                     RRGEQRVTVTTKLELHADEASVKVTTAFINPSRDHRVRVHFPLPEPAATSTSGT"
BASE COUNT          272 a          754 c          723 g          288 t
ORIGIN      
        1 acgtcgccgt cgtgccccac acccactggg accgcgagtg gtacgagccc ttcgagatct
       61 tccggatgcg gctcgtcgac acgctcgacg ccctggtgga gctcatggaa tccgacccct
      121 cctacgggtg gttcctcctc gacggccaga tggccgcggt cgacgactac ctggagatcc
      181 ggccgcaggc gacgggccgg ctgcgggagc tggccgcgtc gggccggatc gcggtcgggc
      241 cgtggtacgt gctcatggac gagttcctgg tctcggggga gaccatggtc cgcaacctcc
      301 agatgggcat ggagcgggcg gccgagttcg gaggggccat ggacgtcggc tacctccccg
      361 acatgttcgg ccacatcgcc cagatgcccc agatcctctc cgaggccggc ctcgagcacg
      421 ccgtggtctg gcggggcgtc ccctcggcca tcgaccgcag cgccttctgg tggttcgccc
      481 ccgacggctc gaaggtgcgg gcggagtacc tgaccaccgg ctactcgaac gccgccaccc
      541 tccccgacga cgccgcttcg ctggtccagc gggtcaccgc ctacgagaag gacgaggcgc
      601 cgttcctcct cgacgggatc ctctacatga acggctcgga ccacctcccg ccccagccct
      661 tcctcggccg ggtggtggcc gaggccaacg agctccagga cgactacgcc ttccggatca
      721 cctcgctccc cgactacctg gcgaaggctc cggtcgaggg gctgcccagc tggcacggcg
      781 agctgcgctc ggggttccgg gccaacatgc tcatgggggt gacctccaac cgggtcgacg
      841 tgaagcgggc tgccgcggcg gccgagatcg ccatcgaacg ccgggccgag ccctacagcg
      901 cgctcttctg cccgccgggc gagtggccgg gccggctcct cgagctggcc tggctcaacg
      961 tcgtccgcaa cgcggcgcac gactccatct gcgcctgctc ggtcgacggc gtcgtcgatg
     1021 cggtgttgga gcgtttcgcc gagacccggc gcgtcggcga gggcctggcc gaacgggccc
     1081 tcgtctccct ggccggctcc atgcagaagg cagggccggt cgtggtcaac gccgccaccc
     1141 ggccgaggtc ggggatcgtg gaggtcgtcg tcgccggagc gagcggcgac gccgcccgcg
     1201 agcaggtgtt gagcacccac tcgagccttc cggggacgct gaccctcgat gccgccacct
     1261 tcacctcgat cctcggggtc ctggagggca cccgcatctc cgacgacgcc tggatccacg
     1321 acgtgggggt cgaggaggac gagaccggca tcgacgtcgt ggtgtcggtg ggaaccgagg
     1381 agatgccggg gatccccgtc gacgcgctga agggcaacct cttcgcccgc ctcgccgccc
     1441 ggcccgacgc cgtcgttcgg gtcacgctcg accagccgcc ggtccgccag gtggtggcgc
     1501 gggtggccga cgtccccggg ctcggctggg ccgcctacga gcccgcggcg ctcgagcacc
     1561 cggtcacggc gcgcgtcgcc gcgccgggcg agggcccggc cggcttcgtc gtcctcgaga
     1621 acgggatcgt gaccgtcgtg gtcgacgccg gggacggcac cttctcgatg aacgggcacg
     1681 ccgggctcgg ccgtctcgtg gacggcggcg acatcggcga ctcctacaac tactcgccgc
     1741 cccataccga caccgtcgtg agcgtgccgg agtcggtccg ggtcgaggtc gtggaggagg
     1801 ggccggtccg ggccggggct ctcgtcacgg ccgagtaccg ctggcccgcg gacgcggacc
     1861 ccgtcgcctc gacgcggcgc ggcgagcagc gggtgaccgt caccaccaag ctcgagctgc
     1921 acgccgacga ggcgtcggtg aaggtcacca ccgcgttcat caacccgagc cgggaccacc
     1981 gggtgcgggt ccacttcccg ctgccggagc cggccgcgac ctccacctcc gggaccg
//
LOCUS       DATGJT010000084         3717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_736981, whole genome shotgun sequence.
ACCESSION   DATGJT010000084 DATGJT010000000
VERSION     DATGJT010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_736981"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1112
                     /locus_tag="VKX24_01455"
     CDS             <1..1112
                     /locus_tag="VKX24_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013823865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07176.1"
                     /translation="FLGTSLTHRWVFDLHADDTYWCTADIGWVTGHSYIVYGPLNNGT
                     TGVMYEGDPMYPNPHRTWEIIERYKVTQYYTAPTLIRAFVKVGHEIPTSHDLSSLKLL
                     GTVGEPINPEAWVWYWRYVGGERCPVVDTWWQTETGGILISPLPGITTLKPGSATLPF
                     PGIHPAIVDDVGKPVSAGHGGYLVMRRPWPGMFRTLYNDHDRWVDVYLSKYGPDTYFV
                     GDGARQDDDGYYWLLGRIDDVMNVSGHRLSTTEIESALVAHEAVAEAATTAAPDPLTG
                     QVPLCFVLLRSGHEPSDELAAELREWVGQKIGKIARPKAVIFAADLPKTRSGKIMRRL
                     LKDIAEGRPLGDTTTLRDPAIVEDIKQQADALLGR"
     gene            complement(1254..2549)
                     /locus_tag="VKX24_01460"
     CDS             complement(1254..2549)
                     /locus_tag="VKX24_01460"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLJ07177.1"
                     /translation="MLVGGATGAVLVAASLFTISAYRHRSFVGDARREAQLSLLPGPA
                     RFSPERVDDLIQAYRQRGGFESVVVTPTRVATSSPAVPADAVPPPFAAAVTAGGLQQR
                     DTSVHGRPYLLLGGTPAPGVKVFFFFPLGDLRHGVREFAVVLCLWWALAAVASAAFGN
                     LLARTRIQALSESRERERRFTSDVAHELRTPLAAMVSAAGMLGEELDTLPPSARPPAA
                     LLVKDVSRLSELVQELLELARLDSGQEGLHVERLRLADALAVVTRTIVPTEESLVLDI
                     APDIEVLADRARFRRVMANLLSNAVRHGGGEITIRARRAGTEAAIEVADRGPGIRPES
                     LERIFDRFHKEDTARSAAGSGLGLAIALEHARAQGGTVRAANRPGGGASFTFTLPLAA
                     PSPVFPGAAGGAPDRAAAASAAPPPAGRAATGTTPPAGG"
     gene            complement(2587..3267)
                     /locus_tag="VKX24_01465"
     CDS             complement(2587..3267)
                     /locus_tag="VKX24_01465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009278301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07178.1"
                     /translation="MNESVLLVEDDASVAEATGLLLERAGLRVIGASDGRRALDLFER
                     QTFDAVVLDVMLPVVDGFEVCRSIRRVSTVPIVMLTARTETAEIVAGLELGADDYVTK
                     PFDGPELVARLRAALRRASAEDPGPTIRVGDLEIDGAAFRASANGRVLDLSATEFRLL
                     LELARHPDRVLTRETLLERVWGYDYLGDSRLVDMAINRLRTKLGDDPKAPRYITTVRG
                     VGYRFTRD"
     gene            complement(3282..3557)
                     /locus_tag="VKX24_01470"
     CDS             complement(3282..3557)
                     /locus_tag="VKX24_01470"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLJ07179.1"
                     /translation="MPDLAGTVAVSRSLLDARFRARLGRSPIRYLADWRMHIAGELLA
                     TTDLSVLAVARRVGYDSEEAFSRAFKRARGTAPSAWRGRRLPAAVVG"
BASE COUNT          540 a         1356 c         1374 g          447 t
ORIGIN      
        1 tcttcctcgg cacgtccttg acgcaccgct gggtcttcga cctccacgcc gacgacacct
       61 actggtgcac cgccgacatc ggctgggtga ccggccacag ctacatcgtc tacgggccgc
      121 tcaacaacgg caccaccggc gtgatgtacg agggcgaccc gatgtatccc aacccccacc
      181 ggacgtggga gatcatcgag cgctacaagg tcacgcagta ctacacggcg ccgacgctga
      241 tccgggcctt cgtcaaggtg ggccacgaga tcccgacgag ccacgacctg tcgtcgctca
      301 agctcctggg cacggtcggc gagccgatca accccgaagc ctgggtgtgg tactggcgct
      361 acgtcggcgg ggaacgctgc ccggtggtcg acacgtggtg gcagacggag accggcggga
      421 tcctcatctc gccgctgccg gggatcacca cgctgaagcc ggggtcggcg acgctgccgt
      481 tcccgggcat ccaccccgcc atcgtcgacg acgtcggcaa gccggtctcc gccggccacg
      541 gcggctacct ggtgatgagg cggccgtggc ccgggatgtt ccggacgctg tacaacgacc
      601 acgaccgctg ggtcgacgtc tacctgtcga agtacggccc cgacacctac ttcgtcggcg
      661 acggcgcccg gcaggacgac gacgggtact actggctcct cggccggatc gacgacgtca
      721 tgaacgtctc gggccaccgg ctgtcgacga cggagatcga gtcggcgctc gtcgcccacg
      781 aggcggtggc cgaggcggcc accaccgccg cccccgatcc cctcaccggc caggtgccgc
      841 tgtgcttcgt cctgctccgc agcggccacg agccgtccga cgagctggcg gcggagctgc
      901 gggaatgggt cggccagaag atcggcaaga tcgcccgtcc gaaggcggtg atcttcgccg
      961 ccgacctgcc caagacccgg tcgggcaaga tcatgcggcg gctgctgaag gacatcgccg
     1021 agggccggcc cctgggcgac accacgacgc tgcgggaccc ggcgatcgtg gaggacatca
     1081 agcagcaggc cgacgcgctc ctcgggcggt gagcgtcggg gccgcgccgc ggccgggcga
     1141 gccggacggc gtcccgctgt cggacgccga ctgggacacc ctggccgcgc tgcagacgga
     1201 cctggacctc gggagctcgg ggcgggccgc acccgagggc cggttcgtgg ccttcagccg
     1261 ccggctggtg gtgtggttcc ggtggctgct cgacccgcag gcggaggggc tgccgatgcc
     1321 gccgctgctc gatccggagc gccgccggcg gcgccgggaa agactgggga cggggccgcc
     1381 agcgggaggg tgaacgtgaa ggaggcgccg ccgccgggcc ggttggcggc ccgcaccgtc
     1441 ccgccctgag cccgggcgtg ctccagggcg atggccagcc cgagccccga gccggcggcg
     1501 ctgcgggccg tgtcctcctt gtggaagcgg tcgaagatcc gctccaggct ctcggggcgg
     1561 atgcccggcc cccggtcggc gacctcgatg gccgcctcgg tgccggcgcg ccgggcccgg
     1621 atcgtgatct cgcccccgcc gtggcgcacg gcgttgctca gcaggttggc catgacccgg
     1681 cggaaccggg cccggtccgc cagcacctcg atgtcggggg cgatgtcgag gacgagcgac
     1741 tcctccgtcg ggacgatggt gcgggtcacg acggccagcg cgtcggccag ccgcagccgc
     1801 tccacgtgga ggccttcctg gccggagtcg agccgggcca gctccagcag ctcctggacg
     1861 agctcggaga gccgggagac gtccttcacc agcagggcgg ccggcgggcg ggccgacggc
     1921 ggcagcgtgt cgagctcctc gcccagcatc cccgccgccg acaccatggc ggccagcggg
     1981 gtgcgcagct cgtgggcgac gtcggaggtg aagcgccgtt cccgctcccg gctctccgac
     2041 agcgcctgga tcctggtgcg ggccagcagg ttgccgaacg ccgccgaggc caccgccgcc
     2101 agcgcccacc acaggcagag cacgacggcg aactcccgca cgccgtggcg gaggtcgccc
     2161 agcgggaaga agaagaacac cttcaccccc ggcgccggcg tcccgccgag gagcaggtag
     2221 ggccggccgt ggaccgacgt gtcgcgctgc tgcaggccgc cggccgtgac cgcggcggcg
     2281 aacgggggcg ggacggcgtc ggccgggacg gccggcgacg acgtcgccac ccgggtcggg
     2341 gtcaccacga cactctcgaa cccgccccgc tgccggtagg cctggatcag gtcgtcgacc
     2401 cgctcggggg agaaccgggc cggcccgggc aggaggctga gctgcgcctc acggcgggcg
     2461 tcgcccacga acgaccggtg gcggtaggcc gagatcgtga acagcgacgc cgccaccagc
     2521 accgcaccgg tggcgccgcc gacgagcacg aacgccagcg tgagccggcg gcggaaggag
     2581 agcgggtcag tcgcgggtga agcggtaccc gacaccgcgg accgtcgtga tgtatcgggg
     2641 cgccttcggg tcgtcaccga gcttcgtccg gaggcggttg atggccatgt cgaccagccg
     2701 ggagtcgccg aggtagtcgt agccccagac gcgctccagc agcgtctccc gggtgaggac
     2761 gcggtcgggg tgacgggcca gttcgaggag cagccggaac tccgtggccg agaggtcgag
     2821 cacccggccg ttggcgctgg cccggaaggc ggcgccgtcg atctccaggt cgccgacccg
     2881 gatcgtcggg ccggggtcct ccgccgaggc ccgccgcagc gccgcccgga gccgggccac
     2941 gagctcgggc ccgtcgaacg gcttggtgac gtagtcgtcc gctccgagct ccagcccggc
     3001 cacgatctcg gccgtctccg tgcgggccgt cagcatgacg atgggcacgg tcgagacccg
     3061 ccggatcgac cggcacacct cgaagccgtc gaccaccggg agcatgacgt cgaggacgac
     3121 ggcgtcgaac gtctggcgtt cgaagaggtc gagggcccgc cggccgtcgg aggcgccgat
     3181 cacccggagc ccggcccgtt ccagcagcag ccccgtcgct tccgcgaccg aggcgtcgtc
     3241 ctccacgagg agcacgctct cgttcatggt cgacctgcac gctacccgac caccgccgcc
     3301 ggtaagcgtc gcccccgcca ggccgacggc gccgtccccc gggcccgttt gaacgcccgg
     3361 ctgaaggcct cctcggagtc gtagccgaca cgacgggcca cggcgaggac gctgagatcg
     3421 gtggtcgcca ggagctcgcc ggcgatgtgc atgcgccagt cggccaggta gcggatcggg
     3481 gagcggccga gccgcgcccg gaaccgggcg tcgagcagcg aacgggacac ggccacggtc
     3541 ccggccaggt cgggcaccgt ccacttccga aggaggcgat cgacaccgcc tccaccggtt
     3601 cggcgccgcc catcacgtgc tgatcgccgt aggggatgac gatgacgtcg ccggccgacg
     3661 cccagtgccg ctcgccgtcg tcgccgccgg cgccggccac ggcccggagg aagatgg
//
LOCUS       DATGJT010000085         2095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_737137, whole genome shotgun sequence.
ACCESSION   DATGJT010000085 DATGJT010000000
VERSION     DATGJT010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737137"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..>2095
                     /locus_tag="VKX24_01475"
     CDS             118..>2095
                     /locus_tag="VKX24_01475"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HLJ07180.1"
                     /translation="MAVSFPPVLAEPRTETVEIAVGGMACGACAARVEKSLRAHAGVL
                     DAGVNFATGRARVAFEAAETGPGALCALVGGLGYEAAVVVPDAVAAPSDAGGHPAGPW
                     FVRAAVAWPLALALVGLPALRTGRGGEAVALVVAAAVLFGCGYPFLRGAAVALRHRSA
                     TMDTLVASAVVAAYGAGLWHFLAAPGMAGAGAAREAHDHAGGAGHAHLTGVAVVVATL
                     LVGRGLEAAARRRALSAVGRLLALGAREAAVVVGDTEVTIPAEQVHVGDVVRVRPGET
                     IPVDGVVVAGASAADESMLTGESLPVEKAAGDRVTSATLNCDGTLDVRATAVGRDTVL
                     AGIVRLVEEAQGRKAPVQRLADRLAGRLVPAVMAVAALTFAAWSLLGDPGGGLMAAVA
                     VLVVACPCSLGLATPAAVLVGTGRGAGLGVLIKGGEVLEAAHAVDTVVLDKTGTITEG
                     RMVVVAVAAGPGESAERLVALTAAAEAGSEHPVARAILSEARRTGLDLPPATGFRAIP
                     GGGVLATVDGRELAVGGLGWLADRGFVVPAGGEGPGGDVTAAVAAAGAAGRTVVAAAW
                     DGAVRGVFVLADGLRPGAAAAVAELRRTGRRVLLVSGDARPAVEAAAAEAGIDEVVAG
                     ATPAEKIAVVAGLQAAGRVVAVVGDGVNDAPALVG"
BASE COUNT          187 a          775 c          881 g          252 t
ORIGIN      
        1 ccgcctgaca ggttctggga acgggcccgt cgggaaccag ggcccgggga gatccgacta
       61 atcgggcaaa tcgtcgccca gccgcgctgt ggccgcccgt ccgagggata ccaaccgatg
      121 gccgtctcgt tcccgccggt cctggccgag cccaggaccg agaccgtaga aatcgccgtc
      181 ggcggcatgg cctgcggggc ctgcgccgcc cgggtggaga agtcgctccg ggcccacgcc
      241 ggggtcctcg acgccggcgt caacttcgcc accggccggg cccgggtggc gttcgaggcg
      301 gccgagaccg ggccgggggc gctctgcgcc ctggtcggcg gactgggcta cgaggcggcg
      361 gtggtcgtcc ccgacgccgt ggccgccccc tccgacgccg gcggccaccc ggccgggccg
      421 tggttcgtgc gggccgccgt cgcctggccg ctggcgctgg ccctggtcgg actgccggcg
      481 ctgcggacgg gccggggcgg tgaggccgtc gccctcgtgg tcgccgccgc cgtcctgttc
      541 ggctgcggct acccgttcct ccggggggcg gcggtggccc tccggcaccg ctcggcgacg
      601 atggacacgc tggtggcgtc ggcggtcgtg gcggcctacg gcgccgggct gtggcacttc
      661 ttggccgcac cgggaatggc gggtgccgga gccgcccggg aggcccacga ccacgccggc
      721 ggcgcgggcc acgcccacct gacgggcgtg gcagtcgtcg tcgccaccct gctggtcggc
      781 cggggcctgg aggccgccgc ccggcggcgg gcgctgtcgg ccgtggggcg cctcctggcc
      841 ctcggggcgc gggaggccgc ggtggtcgtg ggggataccg aggtcacgat cccggccgag
      901 caggtccacg tcggcgacgt cgtgcgggtc cggcccggcg agacgatccc cgtcgacggc
      961 gtcgtcgtgg ccggcgcctc ggcggccgac gagtcgatgc tcaccggcga gtcgctcccg
     1021 gtggagaaag ccgccggcga ccgggtcacc agcgccaccc tcaactgcga cgggacgctc
     1081 gacgtgcggg ccacggcggt gggccgcgac accgtcctgg ccgggatcgt ccggctggtg
     1141 gaggaggccc agggccgcaa ggcgcccgtc cagcgcctcg ccgaccggct cgccggccgg
     1201 ctcgtcccgg cggtgatggc cgtggccgcc ctgaccttcg ccgcctggtc gctcctcggc
     1261 gaccccggcg gcggcctgat ggcggcggtg gccgtcctcg tggtggcctg cccctgctcc
     1321 ctcggcctgg ccacgccggc ggccgtcctg gtgggcacgg gccgcggtgc cggcctcggc
     1381 gtcctcatca agggcggcga ggtcctggag gcggcccacg ccgtcgacac cgtcgtcctc
     1441 gacaagacgg ggacgatcac cgagggccgc atggtggtgg tggccgtggc cgccggcccc
     1501 ggcgagagcg ccgagcggct ggtggccctg acggcggcgg ccgaggcggg ctcggagcac
     1561 ccggtggccc gggcgatctt gtccgaggcc cgccggacgg ggttggacct cccgccggcg
     1621 acggggttcc gggccatccc cggcggcggc gtgctggcca ccgtcgacgg ccgggagctg
     1681 gccgtcggag gcctgggctg gctggccgac cggggcttcg tcgtccccgc cggcggcgag
     1741 ggaccggggg gcgacgtcac cgccgcggtg gccgccgccg gagcggccgg acggacggtg
     1801 gtggccgccg cctgggacgg cgcggtccgg ggcgtgttcg tcctggccga cgggctgcgg
     1861 ccgggcgccg cggccgccgt ggccgagctc cgccggaccg gacgccgggt gctgctggtc
     1921 agcggcgacg cccgtccggc ggtcgaggcc gccgccgccg aggccggtat cgacgaggtg
     1981 gtggccgggg ccacgccggc ggagaagatc gccgtggtgg ccgggctcca ggcggccggg
     2041 cgggtggtgg cggtggtcgg cgacggcgtg aacgacgccc cggcgctggt cgggg
//
LOCUS       DATGJT010000086         3781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_322840, whole genome shotgun sequence.
ACCESSION   DATGJT010000086 DATGJT010000000
VERSION     DATGJT010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322840"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VKX24_01480"
     CDS             <1..603
                     /locus_tag="VKX24_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07181.1"
                     /translation="TPAMRTARRLALPVILLLALSFTAFGPTGAHPRPAGASLRDEEA
                     AMPGTGVGMYTDDSVAHQVSSFTINPKMVSCGVGTLAPGGDFSGPFAMLMYSTRIDSY
                     VVDKEAGEIRATGRMRSITKMNNAVVEDAEHDFLAIAASAVPHGGFQQAVHAGGDRFD
                     VHFSTPFWDQYNPMCSPSTVAAGKCRFGGELLMGHVFMPH"
     gene            609..2045
                     /locus_tag="VKX24_01485"
     CDS             609..2045
                     /locus_tag="VKX24_01485"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF044997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HLJ07182.1"
                     /translation="MRTRCIAALVLSVGVLPVGRVEAAAPGVNPVVRWNVAVLDAIRT
                     TATPATVGARALAVAHTCMYDAWTAYDPVATGTRLGGTLRRPADERTLEAKDEAISRA
                     ARLALVDLYPALAPRFDAILSADGYDPAAPPAEGTPAGVALRACRAVLDFRHHDGANQ
                     LGDEPGGSGAPYSDYTGYRPVNGPDRLSDPDRWQPQRVPDGHGGSTVQRFLTPQWARV
                     VPFAGAAGDGLPAASGDPGPPRAGTPPRQAEVDEMVRLSAGLTDEQKVIAEYWADAPG
                     SELPPGHWMRFAEFCSRRDALGVDSDVKLYFLMANAMLDASIATWTRKVAFDSVRPVT
                     LVRHVEAGRRIRAWGGPYRGTREIDGSEWQPYLPTPPFAEYPSGHSTFSGAGAEVLHL
                     FTGRTDFDATVVVPAGASHIEPGTVPAHDVVLHWGTFEDAADQAGFSRRLAGIHFLTG
                     DADGRLIGREVAARAVAKGREYFTGHPS"
     gene            2143..2847
                     /locus_tag="VKX24_01490"
     CDS             2143..2847
                     /locus_tag="VKX24_01490"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HLJ07183.1"
                     /translation="MEKPMMCGRHSSIRSRLSPALAAVLATGGWWISAGAALGAAGAA
                     APDGSAGAGTGKAVAICCAWGSKMSNGVLTYSINGNDPTAVSIIHNAIQAWDDALPDL
                     TLTEVTKKPAIAITYGPGAADGGESPASTGARGLTTTYLNGRRLVLRVEIGIDGGPAP
                     VNTGAVEEIAKHELGHALGLGHANWDGDLMSPLVNPTPAPLPACDVNAVIHANSWRMV
                     DHARHPKPAPASSSAC"
     gene            2993..>3781
                     /locus_tag="VKX24_01495"
     CDS             2993..>3781
                     /locus_tag="VKX24_01495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07184.1"
                     /translation="MGLAALAIGLPLTSAAAGSAAPAPPLAPDGVCRAAFGVRGPAGG
                     PVVGEGPSGDPMSVTVAWDPAEWPTGLREIATCLSVGGHALAELSSITVAPPNAGSVT
                     VNFTLPAGAPGSLVCEESVLVGTGSTEGRSRPTEAACFKLRAAEDAAAPDGSPVAGRP
                     HATPPAVLPPMTPAAPHPPVRIRRPEIAPPAGPPVGPPVARPRLSPPAARPPVAPPAA
                     RPAAPPAAPTELARRFPAGLLGPVPAPLPAFGPPIAPPAADGPAV"
BASE COUNT          453 a         1546 c         1307 g          475 t
ORIGIN      
        1 actccggcca tgcgcaccgc ccgccgcctc gccctccccg tcattctcct cctggcgctg
       61 tcgttcaccg ccttcgggcc gaccggcgcc catccccgcc cggccggtgc cagcctccgg
      121 gacgaagagg cggccatgcc cggcaccggc gtcggcatgt acaccgacga ttccgtggcc
      181 caccaggtgt cgagcttcac catcaacccg aagatggtca gctgcggcgt gggaacgctg
      241 gcgcctgggg gcgacttctc ggggcccttc gccatgctca tgtactccac ccgcatcgac
      301 agctacgtcg tcgacaagga ggcgggcgag atccgggcca cggggcggat gcggtcgatc
      361 accaagatga acaacgccgt agtggaggac gccgagcacg acttcctggc catcgccgcc
      421 tcggccgtcc cccacggcgg cttccaacag gcggtccacg ccggcggcga ccgcttcgac
      481 gtccacttct ccacgccgtt ctgggaccag tacaacccca tgtgctcgcc gtcgacggtg
      541 gccgccggca agtgccgttt cggcggcgag ctgctcatgg gtcacgtctt catgccccac
      601 tgaggccggt gcggacgcgc tgcatcgccg cgctggtcct gagcgtcggc gtccttccgg
      661 tcggacgggt cgaggcggcg gcgccgggcg tcaaccccgt cgtgcgctgg aacgtcgccg
      721 tcctcgacgc catccgcacg acggccacgc ccgccaccgt cggcgcccgg gcgctggcgg
      781 tggcccacac ctgcatgtac gacgcctgga cggcctacga ccccgtcgcc accggtaccc
      841 gcctcggcgg gacgctccgc cgtcccgccg acgagcggac cctggaggcc aaggacgagg
      901 ccatcagccg ggccgcccgg ctggcgctgg tggatctcta ccccgccctc gccccccgct
      961 tcgacgccat cctgtcggcc gacggctacg accccgccgc cccgccggcc gagggcaccc
     1021 cggccggggt cgccctgcgg gcctgccggg cggtcctcga cttccgccac cacgacggcg
     1081 ccaaccagct cggcgacgag cccggcggca gcggcgcgcc gtactccgac tacaccggct
     1141 accgcccggt caacggcccc gaccgtctct cggatcccga ccggtggcag ccgcagcggg
     1201 tgcccgacgg ccacggcggc agcaccgtcc agcggttcct caccccgcag tgggcccggg
     1261 tcgtgccgtt cgccggcgcc gcgggggacg ggctgcccgc cgcctccggc gacccgggcc
     1321 cgccccgggc gggcactccg ccccgccagg ccgaggtcga cgagatggtc cggctgtcgg
     1381 ccgggctcac cgacgagcag aaggtcatcg ccgagtactg ggccgacgcc ccgggcagcg
     1441 agctcccccc cgggcactgg atgcgcttcg ccgagttctg ctcccggcgc gacgccctgg
     1501 gcgtcgactc cgacgtgaag ctgtacttcc tgatggccaa cgccatgctc gacgccagca
     1561 tcgccacctg gacccgcaag gtcgccttcg actcggtccg gccggtgacg ctcgtccgcc
     1621 acgtcgaggc gggccggcgg atccgggcct ggggcggccc ctaccggggc acccgggaga
     1681 tcgacggatc ggagtggcag ccgtacctcc ccacgccgcc gttcgccgag tacccgtcgg
     1741 gccattccac cttcagcggc gccggcgccg aggtgctgca tctgttcacc ggccggaccg
     1801 acttcgacgc cacggtcgtc gtgcccgccg gcgcctcgca catcgagccc ggaacggtgc
     1861 cggcccacga cgtcgtgctg cactggggga cgttcgagga cgccgccgac caggccggct
     1921 tctcccgccg cctggccggc atccacttcc tcaccggtga cgccgacggg cgcctcatcg
     1981 gccgggaggt ggcggcccgg gccgtggcga aaggacggga atacttcacc ggccatccct
     2041 cctgagcccg ttgaggtccc ggtcgcctga caggccgccg accgcgccgc tgtggcgaga
     2101 gatccacctt gtgctctatg gtgctggcgt cgtctttcgt ctgtggagaa accgatgatg
     2161 tgcgggcggc actcgtcgat ccggagccgg ctcagccccg ccctggcggc cgtcctggcc
     2221 accgggggct ggtggatctc ggccggggcg gcgctgggcg ccgcgggagc cgcggccccg
     2281 gacggcagcg ccggggcggg gaccgggaaa gcggtggcca tctgctgcgc ctggggcagc
     2341 aagatgtcca acggcgtcct cacctactcc atcaacggca acgaccccac ggccgtgtcg
     2401 atcatccaca acgccatcca ggcctgggac gacgcccttc ccgacctcac gctgaccgag
     2461 gtcacgaaga agcccgccat cgccatcacc tacgggccgg gggcggccga cggcggcgag
     2521 agccccgcca gcaccggggc ccgggggctc accaccacct acctcaacgg gcggcggctg
     2581 gtgctgcggg tggagatcgg catcgacggc ggcccggccc cggtgaacac cggcgccgtc
     2641 gaggagatcg ccaagcacga actcggccac gccctcgggc tgggccacgc caactgggac
     2701 ggcgacctca tgtcgccgct ggtcaacccg acgccggcgc cgctcccggc ctgcgacgtc
     2761 aacgccgtca tccacgccaa ctcctggcgc atggtcgatc acgcccgcca tcccaaaccg
     2821 gcgccggcgt cctcgtccgc ctgctgaagc ctccgggtcg cgctgcccgt ccggcgctcc
     2881 gcgcgcttcg tcaaccgatg ctgacggacg ggccgccggt ggccatactt ggcccgtcgc
     2941 gacgccgggc ggacggaggg gagcgatgag gcgcagcgga atgatcggtc acatgggcct
     3001 cgcagcactg gcgatcgggc tgccgctgac gtcggcggcg gccggctcgg ccgcgcccgc
     3061 cccgcccctc gcgcccgacg gggtgtgccg cgcggcgttc ggcgtccggg ggccggccgg
     3121 cgggccggtg gtcggcgagg gcccctcggg cgacccgatg tcggtcaccg tggcctggga
     3181 tcccgccgag tggcccaccg gcctgcggga gatcgccacc tgcctgagcg tcggcggcca
     3241 cgccctggcc gagctgtcct cgatcacggt cgccccgccc aacgccggca gcgtcacggt
     3301 gaacttcacc ctgccggcgg gcgctcccgg gtcgctggtc tgcgaggaga gcgtcctcgt
     3361 cgggacgggc agtaccgagg gccggagccg ccccaccgag gcggcatgct tcaagctgcg
     3421 ggcggcggag gacgccgccg cgccggacgg gtcgcccgtc gccggccgcc cgcacgccac
     3481 gcctccggcc gtgctgccgc cgatgacgcc ggccgccccg catcccccgg tccggatccg
     3541 ccggcccgag atcgcgccgc ccgccggccc gccggtcggc ccgccggtcg cccggccccg
     3601 cctctcgccg ccggccgccc gtccgcccgt cgcgccgccg gccgcccgcc ctgcggcccc
     3661 gcccgcggcc ccgacggagc tcgcccgccg gttcccggcc ggcctcctcg ggccggtgcc
     3721 ggctcccctc cccgccttcg gaccgcccat cgccccgccg gccgccgacg ggccggccgt
     3781 t
//
LOCUS       DATGJT010000087         2280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_530301, whole genome shotgun sequence.
ACCESSION   DATGJT010000087 DATGJT010000000
VERSION     DATGJT010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530301"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VKX24_01500"
     CDS             <1..557
                     /locus_tag="VKX24_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07185.1"
                     /translation="LPVVTEAFREGRLSVAQAVEIVDVAAEAPAVQGQLVEAAGKLSL
                     KGLREQSRRVKASLIVDEDDRYRRVYRKRRMRAWVDRHDVGHLSATMTPDQLARVVDR
                     IDGRAGEIMEDGIRGGWFESGEAHRVDALLELLGPDGAGPAGPHHMVHVVVDYEALVR
                     GHTVAGEQCEIPGFGPVPVWWPAR"
     gene            554..922
                     /locus_tag="VKX24_01505"
     CDS             554..922
                     /locus_tag="VKX24_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HLJ07186.1"
                     /translation="MSEDAVLKVVLTRGVDVVGVAHGGRTIPAHLRSALEIRDPKCIV
                     PRCDVRRNLEIDHRASWNRTGVTKLDELARLCPWHHHLKTFHGYTYRGGPGSWQWLPP
                     EDHDQDLSALRRVISSARRC"
     gene            1073..>2280
                     /locus_tag="VKX24_01510"
     CDS             1073..>2280
                     /locus_tag="VKX24_01510"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HLJ07187.1"
                     /translation="MNLEVGDRWHHPVHVFHDPDRPGAAPAAHTGRMSAELGVARALS
                     GVAATVWLGIVAHQLTVRQFGQVTLVLSLGSLVSLGTDLGIPLALAKVACDHDRLDRR
                     AVGRAVLTRTIAGVIAGGVLVALWADAGQSQRWWMAALYSISVVATPLGGSYLALLRG
                     RAIGIVEAAYNVVSKLALLAVGLATLAAGWKPSGVIAAFVVVDVASSLAIPAVARRRL
                     SLTGTADPLQRAALRLRATLPLAAAGIIGSAYERIDIWLLALLKGSASVAVYVAAYKL
                     YDTVLLPANAIASAAVAAAGPRLATDARGIARRLALRAALLTAPIGVVVAVAAPVLLR
                     AAFGGHYGDASGAVTVLMVAALPGASLAAVTPIALLCRRRVVSRWTLAALAGNVVANL
                     ALVPAFGARGA"
BASE COUNT          287 a          868 c          794 g          331 t
ORIGIN      
        1 ccctcccagt ggtgacggag gccttccggg aagggcggct gtcggtggcg caggcggtcg
       61 agatcgtcga cgtcgcagcc gaggcgccgg cggtccaggg ccaactggtc gaggcggccg
      121 ggaagctgtc cctcaagggg ctgcgggagc agagccggcg ggtcaaggcg tcgttgatcg
      181 tcgacgagga cgatcggtat cggcgggtgt atcgcaagcg gcgtatgcgg gcgtgggtcg
      241 accggcacga cgtcgggcac ctcagcgcca ccatgacgcc cgaccagctg gcccgcgtgg
      301 tcgaccggat cgacggccgg gccggggaga tcatggagga cggcatccgg ggcggctggt
      361 tcgagagcgg cgaggcccat cgggtcgacg ccctcctcga actgctcggg cccgacggcg
      421 ccggccctgc ggggccgcac cacatggtcc atgtcgtcgt cgactacgag gccctggttc
      481 ggggtcacac cgtggccggc gaacagtgcg agatcccggg ctttgggccc gtaccggtat
      541 ggtggcccgc aagatgagcg aggacgccgt cctcaaggtc gtcctcaccc ggggggtcga
      601 cgtcgtcggg gtcgcccacg gcggccggac catccccgcc cacctccgca gtgcgctcga
      661 gatccgcgat ccgaaatgca tcgtgccccg ctgcgatgtc cggcggaacc tcgagatcga
      721 ccaccgcgcc agctggaacc ggaccggcgt cacgaaactc gacgagctgg ccaggttgtg
      781 cccctggcac caccatttga agacgttcca cggctacacc taccggggcg gtccgggtag
      841 ctggcagtgg ctaccgccgg aagaccacga ccaggacctc tccgccctcc gccgggtcat
      901 cagcagcgcc cggcgctgct gagcgcgggc gaaaaatcac ctgcaccacg ttgtcgcccg
      961 gagagtcctg agctccgtgc ctcagaccgg gttactcgcg gcgccgcggg gagagcgagc
     1021 cccgccggca cgacgtatcg tgacccgtcg agagaggcga ggcggtgcgc gcatgaatct
     1081 cgaggtgggt gaccgctggc atcatccggt gcacgtgttc cacgacccgg accggccggg
     1141 ggccgcgccg gcggcgcaca ccggccggat gagcgccgag ctcggagtcg cccgggcgct
     1201 gagcggcgtg gcggccaccg tgtggctcgg catcgtcgcc caccagctca cggtccgcca
     1261 gttcgggcag gtcacgctgg tcttgagcct cgggtcgctg gtgagcctcg gcacggacct
     1321 cggcatcccc ctggcgctgg ccaaggtggc ctgcgaccac gaccggctcg accggagggc
     1381 ggtcgggcgc gccgtgctga cgcgaacgat cgccggagtc atcgccggtg gcgtcctcgt
     1441 cgccctgtgg gccgacgccg gtcagtcgca gcgctggtgg atggccgccc tctactcgat
     1501 ctcggtggtc gccacgccgc tcggcgggtc ctacctggcg ctgctgcggg gacgggccat
     1561 cggcatcgtc gaagcggcct acaacgtggt ctcgaagctg gccctcctcg ccgtcggcct
     1621 ggccaccctg gccgccggct ggaagccgtc cggcgtcatc gccgccttcg tcgtcgtcga
     1681 cgtggcgtcg tccctcgcca tccccgccgt cgcccgccgc cgcctgagcc tcaccggcac
     1741 tgccgacccg ctccagcggg cggcgctgcg actgcgggcc acgttgccgc tcgccgccgc
     1801 cgggatcatc ggctcggcct acgaacggat cgacatctgg ctcctcgccc ttctcaaagg
     1861 cagtgcgtcg gtcgccgtct acgtcgccgc ctacaagctc tacgacaccg ttctcctccc
     1921 cgccaacgcc atcgcctccg ccgccgtcgc cgccgccgga cctcgtctcg ccaccgacgc
     1981 ccgcggcatc gcccgccggc tcgccctccg cgccgcactc ctcaccgcac cgatcggcgt
     2041 ggtggtggcc gtcgccgctc cggtgctgct ccgggcggcc ttcggcggac actacggcga
     2101 cgcgtccggt gccgtcaccg tcctcatggt cgccgccctc ccgggcgcct cactggccgc
     2161 cgtcaccccc atcgccctgc tctgccgccg ccgggtcgtc tcccggtgga ccctggccgc
     2221 actggccggc aacgtcgtcg ccaacctcgc cctcgtaccg gccttcggcg cccggggcgc
//
LOCUS       DATGJT010000088         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_322930, whole genome shotgun sequence.
ACCESSION   DATGJT010000088 DATGJT010000000
VERSION     DATGJT010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322930"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2067
                     /locus_tag="VKX24_01515"
     CDS             <1..>2067
                     /locus_tag="VKX24_01515"
                     /inference="COORDINATES: protein motif:HMM:NF014825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C domain-containing protein"
                     /protein_id="HLJ07188.1"
                     /translation="ERENDPFEWRLEVLGDLPMDDGAPLEWLPGNRLVHVASVTDGIV
                     LTHRLTEAEREGDFLVAGFDLAGFRRRPSLRLTCGEPMDVVGVGPRALVTWEGPEGWL
                     AGFGEGALLAVRVASDGTVQVERCSPEPAVDPALVGRVRGVYDAEVDEPWLPVTAEEL
                     VLGLLVEDRDTFARPQPPLCDLADAAGLERRGVEVAHDDSVWRQDDCFARGRRLSRRL
                     GDERAGLAERVFDSIFGEAEYRNNTGPQGEEAARLALSDPELGLAALDEAVPVDDPAP
                     NDVAAATTWADLLVGLARSGGETAVARWLAALVAERAGDPLSASAHLEFALKADPDFG
                     PVVDRAAWYASDRGDAATAARLWRRLESPRRGELDEVESALRASARTPGRNEPCWCGS
                     GRKYKTCHLPEPAALALSERVGWLCRKAVSYLERRGGEALDDVTEAAAARAIDPDDVG
                     DIDEALADPIVFDAVLTEGGWFEQFLADRAALLPDDEALLAAAWLQVPRTIYEVEAVR
                     PGERMTVRDLRSAESIDVRERTLSRTARLGHRFCGRAVPDGVGHQFVGAVFPVRVGHE
                     AALLDLCDESDPIALCRWVGDLHRPPTLTTREGEPLVECRCVLDMPDPDKLAEELNRT
                     YEPVEGALDTWSEMHDLGNGDRILRASLTLDRSTRRLTVATHSDARMDRVLAALDDAG
                     WPIDIVE"
BASE COUNT          290 a          713 c          774 g          290 t
ORIGIN      
        1 gagcgggaga acgacccgtt cgaatggcga ctggaggtgc tgggcgacct gccgatggac
       61 gacggcgctc cgctggagtg gcttccgggg aaccggctcg tccacgtcgc gtcggtcacc
      121 gacgggatcg ttctcaccca ccggttgacg gaggcggagc gggagggcga tttcctcgtg
      181 gccgggttcg atctggccgg gttccgtcgt cggccctcgc ttcggctcac gtgcggcgag
      241 ccgatggacg tcgtcggagt gggaccccgc gcgctggtga cctgggaggg gcccgagggt
      301 tggctggcgg ggttcggcga aggtgcgttg ctggccgtgc gggtggcgag tgacgggacg
      361 gtgcaggtgg agcggtgctc gcccgagccg gctgtcgacc cggcgctggt ggggcgggtg
      421 cggggcgtgt acgacgccga ggtcgacgag ccatggctgc cggtgacggc cgaagagctc
      481 gtcctcgggc tgctggtcga agaccgggac actttcgccc ggccgcagcc gcccctgtgc
      541 gacctggccg acgccgccgg tctcgaacgg cggggagtag aggtggccca cgacgactcg
      601 gtgtggcgcc aggacgactg tttcgcccgg gggcggcgcc tctcccgccg gttgggggac
      661 gaacgcgccg ggctcgccga acgggtcttc gactcgattt tcggggaagc cgagtaccgc
      721 aacaacaccg ggccccaggg cgaggaggcg gcccgcctgg cgctgtccga tcccgagctg
      781 ggactggcgg cgctggacga ggccgtcccc gtggatgatc cagcgccgaa cgacgtggcg
      841 gcggcaacga cgtgggccga cctcctcgtc gggctggcac ggagcggggg tgagacggcg
      901 gtggcccgct ggctggcggc attggtggcg gaacgggccg gggaccccct ttcggcgtcg
      961 gctcacctcg aattcgcgct caaggctgat cccgatttcg gtccggtggt cgaccgggcc
     1021 gcctggtacg cctcggatcg aggcgatgcc gctacggccg cccggctgtg gcgccgcctc
     1081 gaatcacccc gcaggggcga actcgacgag gtggagtcgg ccctgcgggc gtcggcccgc
     1141 acgccgggac gcaacgagcc atgctggtgc gggtcgggcc gcaagtacaa gacctgccac
     1201 ctccccgaac cggcggccct ggccctgtcg gaacgggtgg gatggctctg ccgcaaggcc
     1261 gtgtcctacc tggaacgccg gggcggcgaa gcgctcgacg acgtgaccga ggccgcggcc
     1321 gcccgcgcca tcgatcccga cgacgtcggc gacatcgatg aggcgctggc cgacccgatc
     1381 gtcttcgacg ccgtcctcac cgagggcggc tggttcgaac agttcctcgc cgaccgagcg
     1441 gcgcttctgc ccgacgacga ggcgctgctc gctgctgcct ggctgcaggt gccccggacg
     1501 atctacgagg tcgaggccgt ccggcccggc gagcggatga ccgtccggga cctacgcagc
     1561 gccgagagca tcgacgtgcg agaacgaacc ctgagccgga cagcccgcct cgggcaccgg
     1621 ttctgcggcc gggccgtccc cgacggcgtt ggccaccagt tcgtcggcgc ggtgttccct
     1681 gtcagggtgg gtcacgaagc ggcgttgctc gacctgtgcg acgagagcga cccgatagcg
     1741 ctgtgccgct gggtcgggga cctccaccgc ccacccaccc tcacgacccg ggaaggagaa
     1801 cccctcgtcg agtgtcgctg cgtgctcgac atgcccgacc ccgacaaact ggccgaagaa
     1861 ctcaaccgca cgtacgagcc cgtcgagggc gccctcgaca cctggtcgga gatgcacgac
     1921 ctcggaaacg gagacagaat cctccgagcc tccctgaccc tcgaccggtc gacccgccgg
     1981 ctcacggtgg caacccactc cgacgcccga atggaccggg tcctcgccgc gctcgacgac
     2041 gccggctggc ccatcgacat cgtcgaa
//
LOCUS       DATGJT010000089         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_530385, whole genome shotgun sequence.
ACCESSION   DATGJT010000089 DATGJT010000000
VERSION     DATGJT010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530385"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VKX24_01520"
     CDS             complement(<1..416)
                     /locus_tag="VKX24_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HLJ07189.1"
                     /translation="MTVDSGERPGAAVVAADAPAVLFVAREQYHDTVARLKAEGFEMC
                     VDVTAVDYLSHPGRKVPEGTAPERFEVVANLLSLSMKRRVRVRVQVPESDPSVASLFD
                     LYPGSEAMEREAYDMVGIAFSGHPDLTRILMPEDWEG"
     gene            complement(494..970)
                     /locus_tag="VKX24_01525"
                     /pseudo
     CDS             complement(494..970)
                     /locus_tag="VKX24_01525"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
     gene            complement(981..1433)
                     /gene="ndhC"
                     /locus_tag="VKX24_01530"
     CDS             complement(981..1433)
                     /gene="ndhC"
                     /locus_tag="VKX24_01530"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HLJ07190.1"
                     /translation="MAQYLPIFALIVLGVLFAALSFVASALLGPTKKPSAAKLAPYEC
                     GIVPEREPPTKFPVRFYLVAMIFIIFDIEIVFLYPFAVIFRQLHTFGLVEVLVFAAVV
                     LVSFLYLVSNGALSWGPAKRLRPGLPERTSESTIARVTAAPTPPGRAA"
     gene            1515..>2066
                     /locus_tag="VKX24_01535"
     CDS             1515..>2066
                     /locus_tag="VKX24_01535"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ07191.1"
                     /translation="MAPRPDHVFDVLVVGGGPSGAACAYWLADAGWDVAVVEKKTFPR
                     EKTCGDGLTPRAVRQLADMGLEDALTGAHRYRGLRSVAFGRTLELSWPEVPGFPAYGY
                     TITRHDLDAIVIGRAEKAGATVWQGTEALDPLEPAQPSAGALAGCAGATLAAKDPEVP
                     GEVRARYVVVADGANSRFGRALGT"
BASE COUNT          309 a          731 c          757 g          269 t
ORIGIN      
        1 ccctcccagt cctcgggcat gaggatccgg gtcaggtcgg ggtggccgct gaacgcgatc
       61 ccgaccatgt cgtaggcctc ccgctccatg gcctcggacc cggggtagag gtcgaacagg
      121 gaggcgacgg acgggtcgga ctcgggcacc tggacccgca cccggacccg ccgcttcatc
      181 gacagcgaga gcaggttggc caccacctcg aagcgctcgg gggcggtgcc ctcgggcacc
      241 ttccgccccg gatggctgag gtagtcgacc gcggtcacgt ccacgcacat ctcgaagccc
      301 tcggccttca ggcgggcgac ggtgtcgtgg tactgctcgc gcgcgacgaa gagcacagcg
      361 ggggcatcgg cggccaccac ggccgccccc ggccgctcac cggagtccac ggtcatcgcg
      421 gcgtcgagac tcggacggcg tcggggttct cgagcagcca gccggcacgc tcggcgggct
      481 cggggcgctc gccctgcggc cgccgggtga gctcgcccgt ccggatcttc tcgtgcaggg
      541 tgaggatggc gtgcagcagg gtctcgggcg agggcgggca ccccggggcg tacacgtcga
      601 ccggcacgat ctggtcgacg ccctggacga tggcgtagtt gttgaacatc ccgccggtcg
      661 acgcgcagac ccccatcgag atcacccact tgggttccat catctggtcg tagacctggc
      721 gcaggaccgg ggccatcttc tgggagaccc ggccggccac gatcatgagg tcggcctggc
      781 ggggggacgc ccggaacacc tccatcccga ggcggctgat gtcgaagtcg gccgccccga
      841 ccgacatcat ctcgatcgcg cagcaggcca ggccgaacgt ggccggccac acgctgttgc
      901 gccgggccca cttcacgagg tcctcgatcc ggcccgtcag gaagttgtgc tggagatcct
      961 cgagccccac cgctcggccc ctaggcggcc cggcccggtg gcgtgggggc cgccgtgacc
     1021 cgggcgatgg tcgactcgga ggtgcgctcg ggcaggccgg ggcgcagccg cttggccgga
     1081 ccccagctca gggcaccgtt gctcacgaga tagaggaagg agaccagcac gacggccgcg
     1141 aacaccagga cctcgaccag gccgaaggtg tggagctgcc ggaagatgac cgcgaaggga
     1201 tagaggaaga cgatctcgat gtcgaagatg atgaagatca tcgccaccag gtagaagcgg
     1261 accgggaact tggtcggcgg ctcccgctcg gggacgatgc cgcactcgta gggggcgagc
     1321 ttggccgcgg acggcttctt cgtcggcccg agcagcgccg acgcgacgaa gctcagggcg
     1381 gcgaagagca cgccgagcac gatcagggcg aagatcggga ggtactgggc cacgcttcgt
     1441 ccggtctacc acgggccttc tggccagggc acatcgagag atcggacccg cgaaagggcc
     1501 ggtaccatcg tgccgtggct ccccgccccg accacgtctt cgacgtcctg gtcgtcggcg
     1561 gcgggccgtc gggggcggcc tgcgcctact ggttggccga cgccggctgg gacgtcgccg
     1621 tcgtcgagaa gaagacgttc ccccgggaga agacctgcgg cgacgggctc accccccgcg
     1681 ccgtgcgcca gctggccgac atgggcctcg aggacgcgct gaccggcgcc caccgctacc
     1741 gggggctgcg ctcggtggcc ttcggccgca ccctcgaact gtcctggccc gaggtcccgg
     1801 ggttccccgc ctacggctac accatcaccc gccacgacct cgacgccatc gtcatcgggc
     1861 gggccgagaa ggcgggggcg acggtgtggc aggggaccga ggcgctcgac cccctcgagc
     1921 ccgcccagcc gtcggccggc gcgctcgccg gctgcgccgg ggccaccctc gccgccaagg
     1981 accccgaggt cccgggcgag gtccgggccc gctacgtggt ggtggccgac ggggccaact
     2041 cgcggttcgg gcgggcgctc ggcacg
//
LOCUS       DATGJT010000090         2532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1049145, whole genome shotgun sequence.
ACCESSION   DATGJT010000090 DATGJT010000000
VERSION     DATGJT010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1049145"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VKX24_01540"
     CDS             complement(<1..319)
                     /locus_tag="VKX24_01540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07192.1"
                     /translation="MSRVPLVFLSVAALVLVSAGAALAGSVPPPGYTVAQRETIYPGI
                     DYQEITKPAGPVLARVAHIGPAAPVDVRVVSSSDKIPTRTGDLETTSAICRRVGCVVA
                     VNGD"
     gene            complement(499..1389)
                     /locus_tag="VKX24_01545"
     CDS             complement(499..1389)
                     /locus_tag="VKX24_01545"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HLJ07193.1"
                     /translation="MTLVFKNGHRRPDTAARTAFVLSGGGNHGSAQVGMLRALIERGI
                     TPDVVIGTSAGALNGSAVAADPSPAGVDHLATVWAALRTEDIFPGGRFGRAWSLLSGG
                     DHLYSNAGLAGLIDQVAPAHQFSELVVPLRVVACDLATGEEVVLASGALKPALLASAA
                     LPGSFPPVLHDHRTLVDGGVVDNVPLSHALAGPVDRIFVLNVSGGVADAPVRNPLDVV
                     LRAFAIARNQRFERELAAAPATVEILVLPRPADGRSPFDFSGAETIIDEAHILAGRFL
                     DALTPGHDRPRRRFRRAHAA"
     gene            1615..2007
                     /gene="ndhC"
                     /locus_tag="VKX24_01550"
     CDS             1615..2007
                     /gene="ndhC"
                     /locus_tag="VKX24_01550"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015610663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HLJ07194.1"
                     /translation="MPTVHLGSTLAASYLQAYFTVAVFMVAAVGMVGAMLGVGRLLRP
                     TRPQEQKYIVYESGVDPLGGWGQAHIRYYLYALLFVMFDVEAVFIFPWAVRLETLSTY
                     GLVEMIIFIALLALGLLYAWRKGVLRWA"
     gene            1998..2501
                     /locus_tag="VKX24_01555"
     CDS             1998..2501
                     /locus_tag="VKX24_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HLJ07195.1"
                     /translation="MGLVEKGKVPKPLTWLLNYSRKYSLWMFQWGLACCAIEMGAALA
                     SPRYDMMRLGVIPFPASPRQADLLVVSGTVTDKMAPAVRRLYDQMPDPKYVISMGSCA
                     NCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLEGVVLLQQRIQNEDLAERWRG
                     EPIVVGG"
BASE COUNT          373 a          883 c          907 g          369 t
ORIGIN      
        1 agtcgccgtt caccgccacc acgcagccga cccgccggca gatcgccgac gtcgtctcca
       61 ggtcgcccgt ccgcgtgggg atcttgtcgc tggagctgac gactcgcacg tcgaccggcg
      121 cggcgggccc gatgtgggcc acgcgggcca gcaccgggcc ggccggcttc gtgatctcct
      181 ggtagtcgat gccgggatag atcgtctccc gctgggcgac ggtatagccc ggtggcggaa
      241 cgctgccggc cagcgccgcg cccgcgctca cgagcacgag cgcggcgacg ctcaggaaaa
      301 cgagggggac cctggacaca cccggcctcc gtatggcccc aacgccgcgt ggagcgacgg
      361 caaccgggga gtggtaactg ggacaagttc ccagtcgatt cgccggggcg ggaacggcct
      421 cctccgcaac ggcgcgcaaa ggccgatcgg gggcctatcg gccgaggcgt gcgtccggga
      481 cgaaagggcg ccgcagggtc aggcggcgtg ggcccggcgg aaccgccggc ggggccggtc
      541 gtggcccggg gtgagagcgt cgaggaaccg gccggccagg atgtgggcct cgtcgatgat
      601 cgtctcggcc ccggagaagt cgaacggcga gcggccgtcg gccgggcggg gaaggacgag
      661 gatctccacg gtcgccgggg cggcggccag ctcccgctcg aagcgctggt tccgggcgat
      721 ggcgaaggcc cgcagcacga cgtcgagagg attgcgcacc ggggcgtcgg ccacgccgcc
      781 cgacacgttg aggacgaaga tccggtccac cggcccggcc agggcgtgcg acagcgggac
      841 gttgtcgacg acgccgccgt cgaccagcgt ccggtggtcg tggaggacgg gcgggaagct
      901 cccgggcagc gcggcgctgg ccaggagggc gggcttcagc gcgccggagg ccagcacgac
      961 ctcctcgccg gtggccaggt cgcaggccac gacccggagc ggcacgacga gctcggaaaa
     1021 ctggtgagcc ggcgccacct ggtcgatcag gccggcgaga ccggcgttgg agtagaggtg
     1081 gtcgccgccg gacaggaggc tccaggcccg gccgaaccgg ccgccgggga agatgtcctc
     1141 cgtccgcagc gccgcccata ccgtcgccag gtggtcgacg ccggccgggc tcgggtcggc
     1201 ggccaccgcc gagccgttca acgccccggc cgaggtgccg atgacgacgt cgggcgtgat
     1261 cccccgctcg atgagggccc gcagcatgcc gacctgggcc gagccgtggt tcccgccgcc
     1321 ggagaggacg aaggccgtgc gcgccgcggt gtcggggcgc cggtgcccgt tcttgaaaac
     1381 cagcgtcatg accgccaccc ggcgctcatc attgagcccc tcgtcacttc cggatccacc
     1441 actctctgga tcaacctctc accgtaggta atcattcgct acctcggtgg gcgctccctt
     1501 tcccatcggc ttctccgaat cgaactcgcg gcgaatagcg aagattccgg gctcgtgaaa
     1561 agtctcacgt atactccgcg ggtcttgacc ggtatcgcct cggggggcgc acacgtgccg
     1621 accgtccacc tcgggtccac cctggcggcg agctacctcc aggcctactt cacggtggcg
     1681 gtgttcatgg tcgccgccgt cggtatggtc ggggcgatgc tcggcgtggg gcgcctgctg
     1741 cgcccgaccc ggccgcagga gcagaagtac atcgtctacg agtcgggcgt cgaccctctg
     1801 ggcggctggg gtcaggccca catccgctat tacctctatg cgctgctgtt cgtgatgttc
     1861 gatgtcgaag ccgtgttcat cttcccctgg gccgtccgcc tggagacgtt gtcgacctac
     1921 ggtctcgtcg aaatgatcat cttcatcgcc ctgctggcgc tcggcctgct ctacgcctgg
     1981 cggaagggtg tcctccggtg ggcctagtcg agaaggggaa ggttccgaag cccctgacct
     2041 ggctgctcaa ctacagccgg aagtactcgc tgtggatgtt ccagtggggc ctggcctgct
     2101 gcgccatcga gatgggggcg gcgttggcca gcccccgcta cgacatgatg cgcctcggcg
     2161 tcatcccctt cccggccagc ccccgccagg ccgacctgct ggtcgtctcg ggcacggtca
     2221 ccgacaagat ggcccccgcc gtccgccggc tctacgacca gatgcccgac ccgaagtacg
     2281 tcatctccat gggaagctgc gccaactgcg gcggccccta ctgggactcc tacagcgtga
     2341 ccaagggggt cgaccagatc atcccggtcg acgtctacgt gcccggctgc ccgccgcggc
     2401 ccgaggccct gctcgagggc gtcgtgctgc tccagcagcg gatccagaac gaggacctgg
     2461 ccgagcgctg gcggggcgag ccgatcgtgg tcggaggctg accgggtcgt gaccgacgct
     2521 gcagagcccg ac
//
LOCUS       DATGJT010000091         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_841587, whole genome shotgun sequence.
ACCESSION   DATGJT010000091 DATGJT010000000
VERSION     DATGJT010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841587"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VKX24_01560"
     CDS             complement(<1..452)
                     /locus_tag="VKX24_01560"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HLJ07196.1"
                     /translation="MRGDGSGPGTGEIAELLERELGGSWEAQLVARSSNSVYRCRGPS
                     GEVAVRVPAMDRDRPSPFWRQMRAIFGLSFPPTMAQVGTAADMIARAGLHSSRPVAAI
                     ERESAGPVLVTTWVDGESWEPDRFPPSPDVHRMFGRFLARMHEHRYPG"
     gene            617..1009
                     /locus_tag="VKX24_01565"
     CDS             617..1009
                     /locus_tag="VKX24_01565"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010243417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HLJ07197.1"
                     /translation="MTRTDINPWEWSKAFGFSQAVEMGGAERVLVCSGQTAIAADGSP
                     PAGVDMGGQVAKAFENLGAVLAAAGMGPSDVVRVNYYTTDVDELIGVLGHLAADFFGG
                     TLPASTLLGVSRLAFPELKIEIEAVAAA"
     gene            complement(1048..1533)
                     /gene="rimM"
                     /locus_tag="VKX24_01570"
     CDS             complement(1048..1533)
                     /gene="rimM"
                     /locus_tag="VKX24_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018384757.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HLJ07198.1"
                     /translation="MSPEHPGEGSGLLEVGRILRPHGLSGEVLVELWSDQSRLRPGNV
                     LDTERGPLTVTASRHHRDRFLVSFSGVTDRAAADAWRGVALLAEPLSQPGTLWVHQLV
                     GATVVSATGEELGVVEAVEPNPASDLLVLGGGGLVPLRFVVSFEPHERVVVDIPDGLL
                     D"
     gene            complement(1541..1930)
                     /locus_tag="VKX24_01575"
     CDS             complement(1541..1930)
                     /locus_tag="VKX24_01575"
                     /inference="COORDINATES: protein motif:HMM:NF024483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HLJ07199.1"
                     /translation="MSGDYEAGDINTISGAGEAEEEDEDLEYEEGDINARGGGAHDDA
                     AYQSEGSTPVGVLTYIARSLADEPDSVVVETERRRGTVVLRVHLAPEDMGRVIGRRGR
                     TAQAIRTLVAAAGAREGAQVSVDIVDD"
     gene            complement(1927..2211)
                     /gene="rpsP"
                     /locus_tag="VKX24_01580"
     CDS             complement(1927..2211)
                     /gene="rpsP"
                     /locus_tag="VKX24_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007923524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HLJ07200.1"
                     /translation="MAVKLRLVRMGKKKQPTYRVVAADSRSPRDGRFLEILGTYAPRG
                     RSTAEPEAVVHIDNAKALKWLGQGAQPTERVERLLKASGTWDEFQAGKSK"
     gene            complement(2384..>2807)
                     /locus_tag="VKX24_01585"
     CDS             complement(2384..>2807)
                     /locus_tag="VKX24_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010551337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HLJ07201.1"
                     /translation="QIDDGQVSRVEAIVRSMTRAERTDPVIIDGSRRVRIARGSGTST
                     QEVNQLLKQFKEMQKMLRGAGAGVLGAMGGGRRQQMAAARELAKSGGSGAEGKLAEMM
                     AAGRPPQPAAATPAPRPGAKGRPQNKKKGGRVTPPKAR"
BASE COUNT          357 a         1041 c         1009 g          400 t
ORIGIN      
        1 tagccggggt agcggtgctc gtgcatcctg gcgaggaacc gaccgaacat ccggtggacg
       61 tcgggagagg gcggaaaccg atcgggctcc cagctctcgc cgtccaccca cgtcgtcacg
      121 aggaccggcc ccgccgactc cctctcgatc gcggcgacgg gacgggacga gtgcaggcct
      181 gcccgggcga tcatgtccgc ggccgtgccg acctgcgcca tcgtcggcgg gaacgagagg
      241 ccgaagatcg ccctcatctg tcgccagaac ggcgacggcc ggtctcggtc catggccggg
      301 acgcggaccg cgacctcgcc cgagggcccg cggcaccggt acacggagtt cgagctccgg
      361 gcgaccagct gggcctccca cgaacccccg agctcgcgtt ccaacagttc ggcgatctcc
      421 ccggtgcctg ggccagatcc gtccccccgc acagcacaag actcgcaccc gaagggccgg
      481 cccggtcaac cacccgagca aaggatgcgg tcgtcggacg cgggccgaac cggcgcgcca
      541 tcgaccgatg gtcgccaggt cccgtaaggg gcgcgcccct aacatgcggc cgtcccgcag
      601 gagagagagg tggcccatga cgcggacgga catcaatccc tgggagtggt cgaaggcgtt
      661 cggtttctcg caggccgtcg agatgggcgg cgcggagcgg gtgctcgtct gctcggggca
      721 gaccgccatc gccgccgacg gctcgccgcc cgccggggtc gacatgggcg ggcaggtggc
      781 gaaggccttc gagaacctgg gcgccgtcct cgccgcggcc gggatgggcc cgtccgacgt
      841 ggtccgggtg aactactaca cgaccgacgt cgacgagctg atcggggtct tgggccacct
      901 cgccgccgac ttcttcggtg ggacgctccc ggcctcgacc ctgctcggtg tcagccggtt
      961 ggcgttcccg gagctgaaga tcgagatcga ggcggtggcc gcggcgtagg gaccgaccgg
     1021 ttccgaccgg acggcgccgc cggcgcgcta gtccaacaga ccgtcgggga tgtccaccac
     1081 gacccgctcg tggggctcga acgagacgac gaagcgcagc ggcaccagcc cgcctccgcc
     1141 gaggaccagg aggtcgctcg ccgggttcgg ctcgacggcc tcgacgaccc cgagctcctc
     1201 gcccgtggcc gacacgaccg tcgccccgac cagttggtgc acccacaacg tgcccggctg
     1261 cgagaggggt tcggccagga gagccacccc gcgccaggcg tcggcggcgg cgcggtcggt
     1321 gacgccggag aacgagacga ggaaccggtc ccggtggtgc cgcgaggcgg tgaccgtcag
     1381 ggggccgcgc tcggtgtcga ggacgttgcc ggggcgaaga cgcgactggt cgctccacag
     1441 ttcgacgagg acctcgccgg agaggccgtg gggccggagg atccggccca cctcgaggag
     1501 gccggagccc tcccccgggt gctccggtga caccgggaga tcagtcgtcg acgatgtcga
     1561 cgctcacctg ggcgccctcg cgggccccgg ccgccgcgac cagcgtcctg atggcctggg
     1621 ccgtgcgccc gcgccggccg atcacccggc ccatgtcctc gggggcgagg tgcacccgca
     1681 ggacgaccgt gccccgacgc cgctcggtct cgacgacgac cgagtccggc tcgtcggcga
     1741 gggaacgggc gatgtaggtg aggacgccga ccggggtcga gccctcggac tggtaggcgg
     1801 cgtcgtcgtg ggcgccgccg ccgcgggcgt tgatgtcgcc ttcttcgtac tcgaggtcct
     1861 cgtcctcttc ctcggcctcg ccggcacccg agatggtgtt gatgtcgccg gcctcgtagt
     1921 cgccgctcac ttggacttgc ccgcctggaa ctcgtcccac gtgccggagg ccttgagcag
     1981 gcgctcgacc cgctcggtcg gctgggctcc ctgcccgagc cacttgaggg ccttggcgtt
     2041 gtcgatgtgc acgacggcct cgggctcggc cgtggagcgg ccccgggggg cgtaggtccc
     2101 gaggatctcg aggaaccgcc cgtcgcgggg cgaccggctg tccgccgcca ccacccggta
     2161 ggtcggctgc ttcttcttcc ccatccgcac gaggcggagc ttcactgcca ccggttcggt
     2221 cctctctcgg tcagctcgtc gctgcgggcg tgggtcgtgg ctcgtcgaag tggagcgcgt
     2281 gtcgcgtgcc gaccgcccgc cggtcccgct tgctgggacc cgatgcgccg cccattctcg
     2341 cagactcggg gacgggggtg ccccacggcc cgggccgggg gcctcaccgg gccttcggcg
     2401 gggtgacccg gccccccttc ttcttgttct ggggccgccc cttggccccg ggcctcgggg
     2461 ccggggtggc cgccgctggc tgcggagggc gtccggcggc catcatctcg gccagcttgc
     2521 cctcggcccc ggaccccccg ctcttggcca gctcacgggc agccgccatc tgttggcgcc
     2581 gtcccccgcc catcgccccg agcaccccgg cgccggcgcc ccgcagcatc ttctgcatct
     2641 ccttgaactg cttgagcagc tggttgacct cctgggtgga ggtgcccgac ccccgtgcga
     2701 tccggacccg gcgcgacccg tcgatgatca ccgggtcggt ccgctcggct cgcgtcatcg
     2761 accggacgat cgcctccacc cgggacacct gcccgtcgtc gatctgg
//
LOCUS       DATGJT010000092         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_530563, whole genome shotgun sequence.
ACCESSION   DATGJT010000092 DATGJT010000000
VERSION     DATGJT010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530563"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(314..844)
                     /locus_tag="VKX24_01590"
     CDS             complement(314..844)
                     /locus_tag="VKX24_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07202.1"
                     /translation="MRKLGVLFASGIAVGSMVLASPAAWANDYRHQDGHGRYDRGHFT
                     LGVKIVDSNADDRGRRGPSRGDRWSVAFNLVDWRNRVGDGVADCVVTSIHDRDWRTSK
                     SHCDVVFHLPDGNLHMDGTVDGDDFDDGHATLPVTGGSGDFRGAHGKTVFRPAGGWYH
                     HDRGRGRDLTADVDPY"
     gene            complement(993..>2062)
                     /gene="dinB"
                     /locus_tag="VKX24_01595"
     CDS             complement(993..>2062)
                     /gene="dinB"
                     /locus_tag="VKX24_01595"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF002677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HLJ07203.1"
                     /translation="YEARRFGVHSAMPMGRARRLCPQAVVLPPRFELYGAKSRQVHGI
                     FAAFTPLIEPIALDEAFLDVTGAAHHFGDGPEIGAAIRARIRAETGLTASVGVAGSKL
                     LAKLASDDAKPDGLLVVEPGTELAYLHPHPVGRLWGVGPATLARLARFGVETIGDLAA
                     LPEASLVDALGRAHGQLLHALAHGRDDRPVEADRETKSIGQEETFPRDVTDREALRRE
                     VRRMAERVGSRLREHGLAGRTVTLKVRFPDFRTITRSATLPEAFDASAEIAGLALGLL
                     DKVDTAAGVRLLGVTVSNLVQGAAQQGTLFGEGPAAAPGGDRPSSGVQAAVDAVRARF
                     GEGAVGPAVLLEPAERPPSSD"
BASE COUNT          271 a          728 c          765 g          298 t
ORIGIN      
        1 gagctcaagc gcaagaaccg ccggcgtccg gctcccagca acaactgagc cccgcaggga
       61 cgttcgcgtt gcgggggcac cgttccggtg cccccgctct gcgctgtccc cagctttgcg
      121 cctaggtccc cagctctgtc cggctgcgcc gctcgtggat ggcgcaggcc gttctgagca
      181 gcctaggccc acctgacact cggtgcaacg tggcaccaaa tgccctggct ggacaaatcg
      241 ggcatttgtg ccgcccctcc ggtttctggc gttcctcaag gccgccatgc ggctgtgagg
      301 aacgccggtt cggtcagtag gggtcgacgt cggcggtgag gtcccggccg cggccccggt
      361 cgtggtggta ccagccgccg gcgggacgga agaccgtctt gccgtgggct ccccggaagt
      421 cgccgctgcc gccggtcacc ggcagggtgg cgtggccgtc gtcgaagtcg tcaccgtcga
      481 ccgtgccgtc catgtgcagg tttccgtcgg gcaggtggaa gacgacgtcg cagtgggact
      541 tcgatgtccg ccagtcccgg tcgtggatcg acgtgacgac gcagtcggcc acgccgtcgc
      601 cgacccggtt gcgccagtcg acgaggttga acgccaccga ccagcggtcg ccccggctcg
      661 ggccccgccg gccgcggtcg tcggcgttgg agtcgacgat cttcacgccg agcgtgaagt
      721 ggccccggtc gtagcgacca tgaccgtcct ggtggcggta gtcgttggcc caggccgccg
      781 gagaggcgag caccatgctc cccacggcga ttccggacgc gaagagaaca cccagctttc
      841 gcaccgcttt ccccaatctc cctgtgccgg tcgttcacgc cggcggtgtg cccgagttcg
      901 gccctgtcgg gcaaacaggt tgcggtgcag cgtaaccaaa atctgtcatt cagtgcaaca
      961 ttgcatcagg tgcacaattc ggacatttgg gattagtcgg acgacggggg ccgctcggcg
     1021 ggctcgagga ggacggcggg gccgacggcg ccctcaccga accgggcccg cacggcgtcg
     1081 acggcggcct ggaccccgga cgacggccgg tcgccgcccg gggccgccgc cgggccctcg
     1141 ccgaacagcg ttccctgctg ggccgctccc tggaccaggt tgctgacggt cacgccgagc
     1201 agccggacgc cggccgccgt gtcgaccttg tccagcagcc cgagggcgag gccggcgatc
     1261 tcggccgagg cgtcgaaggc ctcgggcagc gtggccgagc gggtgatcgt gcggaagtcg
     1321 gggaagcgga ccttgagcgt gacggtgcgg ccggccaggc cgtgctcccg gagccggctg
     1381 ccgacccgct cggccatccg gcggacctcc cggcggagcg cctcccggtc ggtcacgtcg
     1441 cggggaaacg tctcctcctg gccgatcgac ttcgtctccc ggtcggcctc caccggccgg
     1501 tcgtcgcgcc cgtgggccag ggcgtggagc agctgcccgt gggcccggcc gagggcgtcg
     1561 accaggctgg cctccgggag ggcggcgagg tcgccgatcg tctcgacgcc gaagcgggcc
     1621 aggcgggcca gggtggccgg cccgacgccc cacagccggc cgacggggtg cgggtggaga
     1681 tacgcgagct ccgtgcccgg ctcgacgacg agcagcccgt cgggtttggc gtcgtcgctg
     1741 gccagcttgg ccaggagctt gcttccggcc acgccgaccg acgccgtgag gccggtctcg
     1801 gcccggatgc gggcccggat ggcggcgccg atctccggcc cgtcgccgaa gtggtgtgcc
     1861 gcacccgtga cgtcgaggaa ggcctcgtcg agggcgatcg gctcgatcag cggggtgaag
     1921 gcggcgaaga tcccgtgcac ctgccggctc ttcgccccgt agagctcgaa ccggggtggc
     1981 aggaccacgg cctgggggca gagccgccgg gcccggccca tcggcatggc cgagtggacg
     2041 ccgaagcgcc gggcctcgta gg
//
LOCUS       DATGJT010000093         2843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1463674, whole genome shotgun sequence.
ACCESSION   DATGJT010000093 DATGJT010000000
VERSION     DATGJT010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463674"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2843
                     /gene="rpoC"
                     /locus_tag="VKX24_01600"
     CDS             <1..>2843
                     /gene="rpoC"
                     /locus_tag="VKX24_01600"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019632630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HLJ07204.1"
                     /translation="ECYCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVT
                     HIWYFKGVPSRLGYLLDLAPKNLEKIIYFAAHLITWVDEERRHRDLSSLEAKHRAEIE
                     QVERDRDIWIDNRFKELESDLEELEGSGAKDSELNKLRKAAEKEIADYRERRNNEIEH
                     YKTVFDTFTSLAPKQLVDDERVWRDLQDRYAEYFAGGMGAQAVEELISRLDLNAEEES
                     LRDTISTGKGQKKAKAIKRLKVVSAFNRRTEEDRLVNSPTGMVLRAVPVIPPDLRPMV
                     QLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGR
                     RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLRLHQCGLP
                     KAMALELFKPFVMKRLVDLEFAQNIKSAKRMVERSRPQVWDVLEEVIKEHPVLLNRAP
                     TLHRLGIQAFEPVLVEGKAIQIHPLVCAAFNADFDGDQMAVHLPLSAEAQAEARILML
                     SANNILSPAHGRPIAIPTQDMVIGAYYLTEQVDGEEGEGRYFGSLSEAEMAFDRASYD
                     PEAAPLSIHAKIRVRMPASKFPEDRFPERSDARPDSIVVKRLEPHNGDAPLVVVETTL
                     GRLLLNEAFPADFPFQDTVVKKRDMTTIVDDLVRFYPKAIVAQSLDNLKDLGFHFSTR
                     SGLTISIDDVRTPPDKASILDGFEREAEKVETQFRKGVITDDERRQKEIEIWTEATDK
                     VREAMQRSMAAEKFNPIDMMVGSGARGNIMQVRQIAGMRGLVANPRGEIIPRPIKSNF
                     REGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVAQELIVREEDCGSTRGIM
                     VDTTSDERILETKILGRVPAEDIHLADGTVIPRDEREIGELEMEQIAGDPSVTRIRVR
                     SVLTCDAAVGICSKCYGRMMATGTMVDLGEAVG"
BASE COUNT          507 a         1000 c          936 g          400 t
ORIGIN      
        1 ggagtgctac tgcggtaagt acaagcgcgt ccggttcaag ggcatcatct gcgagcggtg
       61 cggcgtggag gtcacccgct ccaaggtccg ccgggagcgg atgggccaca tcgagctggc
      121 cgcccccgtc acccacatct ggtacttcaa gggcgtcccg tcgcggctcg gctatctcct
      181 cgacctggcc ccgaagaacc tcgagaagat catctacttc gccgcccacc tgatcacctg
      241 ggtcgacgag gagcgccgcc accgcgacct ctcctcgctg gaggccaagc accgggccga
      301 gatcgagcag gtcgagcggg accgcgacat ctggatcgac aaccgcttca aggagctgga
      361 gagcgacctc gaggagctcg agggctccgg ggccaaggac tcggagctca acaagctccg
      421 caaggcggcg gagaaggaga tcgccgacta ccgggagcgg cgcaacaacg agatcgagca
      481 ctacaagacg gtgttcgaca cgttcacctc gctggccccc aagcagctcg tcgacgacga
      541 gcgcgtctgg cgcgacctgc aggaccgcta cgccgagtac ttcgccggcg ggatgggcgc
      601 ccaggcggtc gaggagctga tctcccggct cgacctgaac gccgaagagg agtccctccg
      661 ggacacgatc tccaccggca agggccagaa gaaggccaag gcgatcaagc ggctcaaggt
      721 cgtgtcggcc ttcaaccgcc gcaccgagga ggaccggctc gtcaactcgc cgactggcat
      781 ggtgctgcgc gccgtcccgg tcatcccgcc cgacctgcgg ccgatggtgc agctcgacgg
      841 cggccgcttc gccacctccg acctcaacga cctctaccgc cgggtcatca accggaacaa
      901 ccggctgaag cggctcctcg acctcggcgc cccggagatc atcgtcaaca acgagaagcg
      961 gatgctccag gaggcggtcg acgcactgtt cgacaacggc cgccggggcc gaccggtcac
     1021 cggtccgggc aaccgcccgc tgaagagcct ctccgacatg ctgaagggca agcagggccg
     1081 gttccgccag aacctgctcg gcaagcgggt cgactactcc ggccggtcgg tcatcgtcgt
     1141 cggcccccag ctgcggctcc accagtgcgg cctgcccaag gccatggcgc tggagctgtt
     1201 caagcccttc gtgatgaagc gcctcgtcga cctggagttc gcccagaaca tcaagtcggc
     1261 caagcggatg gtggagcggt cgcgccccca ggtgtgggac gtgctggagg aggtcatcaa
     1321 ggagcacccg gtgctgctca accgggcccc gacgctccac cggctcggca tccaggcctt
     1381 cgagcccgtc ctcgtcgagg gcaaggccat ccagatccac ccgctggtct gcgccgcctt
     1441 caacgccgac ttcgacggcg accagatggc tgtccacctg ccgctgtcgg ccgaagccca
     1501 ggccgaggcc cggatcctca tgctgtcggc caacaacatc ctctccccgg cccacggccg
     1561 gccgatcgcc atccccaccc aggacatggt catcggcgcc tactacctga ccgaacaggt
     1621 cgacggggag gagggcgagg gccggtactt cggatcgctg tcggaggcgg agatggcctt
     1681 cgaccgggcc tcgtacgacc ccgaggcggc tccgctgtcg atccacgcca agatccgggt
     1741 gcggatgccg gcctcgaagt tcccggagga ccggttcccg gagcgttccg acgcccggcc
     1801 cgactcgatc gtcgtcaagc ggctcgagcc ccacaacggg gacgctccgc tggtcgtggt
     1861 ggagacgacg ctcggccggc tgctcctgaa cgaggccttc cccgccgact tccccttcca
     1921 ggacacggtg gtgaagaagc gggacatgac gacgatcgtg gacgacctgg tccgcttcta
     1981 tcccaaggcc atcgtggccc agagcctcga caacctgaag gacctcggct tccatttctc
     2041 gacccggtcc ggcctcacga tctccatcga cgacgtccgc accccgcccg acaaggcgtc
     2101 gatcctcgac ggcttcgagc gggaggcgga gaaggtcgag acccagttcc gcaagggcgt
     2161 catcaccgac gacgagcggc gccagaagga gatcgagatc tggacggagg ccaccgacaa
     2221 ggtgcgggag gccatgcagc gctcgatggc ggccgagaag ttcaacccca tcgacatgat
     2281 ggtcggctcc ggcgcccgag ggaacatcat gcaggtccgc cagatcgccg gtatgcgggg
     2341 tctggtggcc aacccccggg gcgagatcat cccgcggccg atcaagtcga acttccgtga
     2401 gggcctctcg gtcctcgagt acttcatctc cacccacggc gcccggaagg gcctggccga
     2461 caccgccctg cggacggccg actccggcta cctgacccgc cgcctcgtcg acgtggccca
     2521 ggagctgatc gtccgggagg aggactgcgg ctcgacgcgg gggatcatgg tcgacacgac
     2581 ctccgacgag cggatcctgg agacgaagat cctgggccgc gttccggcgg aggacatcca
     2641 cctggccgac ggcacggtga ttccccgtga cgagcgggag atcggcgagc tggagatgga
     2701 gcagatcgcc ggggacccgt ccgtcacccg gatccgggtc cggtcggtgc tcacctgcga
     2761 cgccgccgtc gggatctgct ccaagtgcta cggccggatg atggccaccg gcacgatggt
     2821 cgacctcggc gaggccgtcg gga
//
LOCUS       DATGJT010000094         3097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1463785, whole genome shotgun sequence.
ACCESSION   DATGJT010000094 DATGJT010000000
VERSION     DATGJT010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463785"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VKX24_01605"
     CDS             <1..382
                     /locus_tag="VKX24_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HLJ07205.1"
                     /translation="RIPNAATDFVYAAIGEELGLIGTTAVLLIYLLLVGVGFRIALRA
                     EQPFLKLLAAGLTTILGFQTFIILGGVTRLIPLTGITMPFVSYGGSSLVANFVILALL
                     LRISDEVARRSDADVGAPAARTQR"
     gene            388..1926
                     /locus_tag="VKX24_01610"
     CDS             388..1926
                     /locus_tag="VKX24_01610"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HLJ07206.1"
                     /translation="MNRQVRRVGIAVVVCFLALFVQLNYLQVVKAHSLANNPRNVRAV
                     VRDYSEPRGQIITADGVVVARSVPVDDEFERLRTYPTGPLFAHASGFFSFTLGATGVE
                     DAYNSDLSGRNLDRQFHNIGDWLIGKEQTGDAVLSLRNVAQEAARDALGERKGSVVVV
                     DPATGEVLAMWSYPSYDPGPLAGHAPKPVQAAYTGYTHDPANPMLARAYRERYPPGST
                     FKIVTASTAIETGTANPGSRYPVLRFLALPQSDKKLHNFGDEACGGTMADAFRVSCNT
                     TFAQVGLDLGEKLVDGMKAFGITEDIPFDLPAARSSGPAAGTFEHNKPSFANAAIGQG
                     DVAVTPLQMAMVAAAIANGGVMMAPHVVKEIRDADGRVIRTIGPTEWKRAVSPTTASA
                     LTQMMIDVVKRGTGTAAAIPGVTVAGKTGTAENPGGPPHAWFVAFAPAEAPRFAVAVI
                     VEHGGDLGDEATGGRVAAPVAQKVLATLLSQPAPTTSTTAPPPAGGQQNPTSTTAGPT
                     PGGR"
     gene            1937..>3097
                     /gene="pknB"
                     /locus_tag="VKX24_01615"
     CDS             1937..>3097
                     /gene="pknB"
                     /locus_tag="VKX24_01615"
                     /inference="COORDINATES: protein motif:HMM:NF033483.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
                     /protein_id="HLJ07207.1"
                     /translation="MPERVYTNRYEIVRHLARGGMAEVYLAHDQLLDRRVALKVLFAE
                     FARDPAFVQRFRREAQAAANLNHPNIVAVFDWGEEDGTYFIVMEYVEGRSLREAIQAE
                     GPLYPNLAADLASDIAGALGFAHRNGVVHRDVKPGNILLTPQGQVKVTDFGIARAAGI
                     SEGLTQTGSVMGTATYFSPEQAQGLPVDARSDVYSLGVVLYEMVCGIPPFTGESPISV
                     AYKHVREEPPRPTVVNPDVPAALENVILTAMAKSPEARYDSADDMRADLARFRRGEQT
                     SSIPLMAVPVVGNDVTVANPRLDKVYDRTTVGTVIPSPTIPVAPRRSAGPFVLALVAL
                     LAALAGLGYLLARQLSGNGKSGALVPVANYVGMTQHDAELLIQNAGLKPDSTS"
BASE COUNT          455 a         1178 c         1035 g          429 t
ORIGIN      
        1 ccggatcccc aacgccgcca ccgacttcgt ctacgccgcc atcggcgagg aactgggcct
       61 gatcggcacc accgccgtcc tcctcatcta cctgctgctg gtcggcgtgg gcttccgcat
      121 cgccctccgg gccgaacagc cctttctcaa gctgctggcg gccgggctga ccacgatcct
      181 ggggttccag acgttcatca tcctgggcgg cgtgacccgg ctcatccccc tcaccgggat
      241 caccatgccc ttcgtctcct acggcgggtc gtcgctggtg gccaacttcg tgatcctggc
      301 gctgctgctg cggatctccg acgaggtggc ccgccgctcc gacgccgacg tcggggcccc
      361 cgccgcccgg acgcagcgat gagcccgatg aaccgtcagg tccgccgggt cggcatcgcc
      421 gtcgtcgtct gcttcctggc cctcttcgtc cagctcaact acctccaggt cgtcaaggcc
      481 cacagcctgg ccaacaaccc ccgcaacgtc cgggcggtgg tgcgggacta ctccgagccc
      541 cggggccaga tcatcaccgc cgacggcgtg gtcgtcgccc gctcggtgcc cgtcgacgac
      601 gagttcgagc ggctccgcac ctacccgacc gggccgctct tcgcccacgc cagcggcttc
      661 ttctccttca cgctcggggc gacaggcgtg gaggacgcct acaactccga tctctccggc
      721 cggaacctcg accggcagtt ccacaacatc ggcgactggc tgatcggcaa ggagcagacc
      781 ggcgacgccg tcctgtcgct ccgcaacgtc gcccaggagg cggcccgcga cgccctcggc
      841 gagcgaaagg gatcggtcgt cgtcgtcgac ccggccaccg gcgaggtcct ggcgatgtgg
      901 tcgtacccgt cctacgaccc gggcccgctg gccggccatg caccgaagcc ggtgcaggcg
      961 gcctacaccg ggtacaccca cgacccggcc aacccgatgc tggcccgggc ctaccgggag
     1021 cgctacccgc cggggtcgac gttcaagatc gtcacggcct ccaccgccat cgagaccggc
     1081 accgccaacc cggggagccg ctacccggtg ctccggttcc tggccctgcc gcagtccgac
     1141 aagaaactcc acaacttcgg cgacgaggcc tgcggcggga cgatggccga cgccttccgg
     1201 gtctcgtgca acacgacgtt cgcccaggtc ggcctggacc tcggggagaa gctggtcgac
     1261 gggatgaagg ccttcggtat caccgaggac atcccgttcg acctgcccgc ggcccggagc
     1321 agcggtccgg ccgccggcac gttcgagcac aacaagccga gcttcgccaa cgccgccatc
     1381 ggccagggcg acgtcgccgt caccccgctg cagatggcca tggtggcggc ggcgatcgcc
     1441 aacggcggtg tgatgatggc gccgcacgtg gtgaaggaga tccgggatgc ggacgggcgg
     1501 gtcatccgca ccatcgggcc gacggagtgg aagcgggcgg tgtcgccgac gaccgcttcg
     1561 gccctgaccc agatgatgat cgacgtggtg aagcggggga cgggcaccgc cgccgctatc
     1621 cccggcgtga ccgtggccgg caagacgggc accgccgaaa accccggcgg gccgccgcac
     1681 gcctggttcg tggccttcgc cccggccgag gcgccgcgtt tcgcggtggc cgtcatcgtc
     1741 gagcacggcg gcgacctcgg cgacgaggcc accggggggc gggtggccgc cccggtggcc
     1801 cagaaggtgc tggccacgct gctgtcgcag ccggcgccga cgacgtcgac gacggcgccg
     1861 ccgccggccg gaggtcagca gaaccccacc tcgacgacag ccgggccgac gcccggcgga
     1921 cggtagggtt cctccgatgc ccgaacgggt ctacacgaac cggtacgaga tcgtccggca
     1981 cctggcccgc ggcgggatgg ccgaggtcta cctggcccac gaccagctgc tcgaccgccg
     2041 tgtggcgctc aaggtgctgt tcgccgagtt cgcccgggac ccggccttcg tgcagcgctt
     2101 ccggcgggag gcccaggccg cggccaacct caaccacccc aacatcgtgg ccgtcttcga
     2161 ctggggcgag gaggacggca cgtacttcat cgtcatggag tacgtcgagg gccgcagcct
     2221 ccgggaggcc atccaggcgg aggggccgct ctatccgaac ctggccgccg atctcgcctc
     2281 cgacatcgcc ggggcgctcg gcttcgccca ccgcaacggc gtcgtccacc gcgacgtgaa
     2341 acccggcaac atcctcctca ccccccaggg ccaggtgaag gtcaccgact tcggcatcgc
     2401 ccgggcggcg ggcatcagcg agggcctgac ccagacgggg tcggtgatgg ggacggcgac
     2461 gtacttctcc cccgagcagg cccagggcct gccggtcgac gcccgttccg acgtctactc
     2521 cctcggcgtc gtcctctacg agatggtctg cggcattccc ccgttcaccg gggagagccc
     2581 gatctcggtc gcctacaagc acgtgcggga ggagccgccc cggccgacgg tcgtcaatcc
     2641 cgacgtgccc gccgccctcg agaacgtgat cctcaccgcc atggccaaga gccccgaggc
     2701 ccgctacgac tcggccgacg acatgcgggc cgacctcgcc cgtttccgcc ggggcgagca
     2761 gacgtcctcg ataccgctca tggccgtgcc ggtggtgggc aacgacgtca ccgtggccaa
     2821 cccccggttg gacaaggtct acgaccggac gacggtcggc accgtcatcc cctcgccgac
     2881 catcccggtg gcgccgcgcc gctcggcggg cccgttcgtg ctggcgctcg tcgcgctgct
     2941 ggcggcgctg gccgggctcg gctacctgct ggcccggcag ctgtcgggga acggcaagag
     3001 cggagcgctc gtgccggtgg ccaattacgt cgggatgacc cagcacgacg ccgagctgct
     3061 gatccagaac gccgggctca agcccgacag caccagc
//
LOCUS       DATGJT010000095         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_530797, whole genome shotgun sequence.
ACCESSION   DATGJT010000095 DATGJT010000000
VERSION     DATGJT010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530797"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VKX24_01620"
     CDS             <1..268
                     /locus_tag="VKX24_01620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ07208.1"
                     /translation="TTAYFVVAEALTNIAKHAGASRAAVKVARQNGHLTVEVTDDGIG
                     GADAGRGTGLAGLVDRVTAVDGHLRLSSPAGGPTVLTVELPCAS"
     gene            256..903
                     /locus_tag="VKX24_01625"
     CDS             256..903
                     /locus_tag="VKX24_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016909606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07209.1"
                     /translation="MRIVIAEDAVLLRAGLTRLLADAGHEVVAAVGDAEALLEAVEDH
                     KPDIVVTDVRMPPTHNDEGLKAAVELRARHPQLAILVLSQYVEERYATELLVGDTRGL
                     GYLLKDRVAEVGEFVDAVERVGNGGTALDPDVVAQLLARSRRADPLAALTPREREVLQ
                     LMAEGRSNTAIAQALVVSEGAVEKHTSSIFLKLNLAPTDSAGHRRVLAVLRYLEG"
     gene            905..1723
                     /locus_tag="VKX24_01630"
     CDS             905..1723
                     /locus_tag="VKX24_01630"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HLJ07210.1"
                     /translation="MRLRLPKRLSRWPGRQGVVAIGLVMTAALVGFAALVAVNAMARQ
                     TVREEHTYAFTGSTVSIDAELGDVQIVPGQAGEVTVSRRLTYGLRRPFVSERADGDTF
                     RVEDRPCSAEAAFPCQVRWLLQVPRDLTVEVQTRGGSITVNGLRGTIKLVSTSGAVTA
                     LNPSGKLVTLRSTSGPVKAQSVSSDQVVATSTAGDVTATFQTPPSLMIGRSQTGRVGV
                     VLPTGDDHYDIRAKSQDGSKTIALSGATNDPNGRRRIDILSTSGDVSVLQSPEN"
     gene            1818..>2221
                     /locus_tag="VKX24_01635"
     CDS             1818..>2221
                     /locus_tag="VKX24_01635"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HLJ07211.1"
                     /translation="MNGQFPWYVARSAGLVAWALLAASVLWGLALSTKVLGPRVRPNW
                     MLDLHRWLGGLALTFTGLHVGALLLDTYVHFGLVSVLVPFATSWHPAAVAWGVVSLYL
                     LAAVEVTSLLRSRVPKSVWRKTHFLSFLLFVTS"
BASE COUNT          299 a          841 c          768 g          313 t
ORIGIN      
        1 gaccaccgcc tacttcgtgg tcgccgaggc cctgaccaac atcgccaagc acgccggcgc
       61 cagccgggcg gccgtgaagg tggcccgcca gaacgggcat ctcaccgtcg aggtgaccga
      121 cgacggcatc ggcggcgccg atgccggccg cggcaccggt ctggccggac tcgtcgaccg
      181 ggtgaccgcc gtcgacggcc atctgcgcct ctcgagcccc gccggcggcc cgaccgttct
      241 caccgtggag ctgccatgcg catcgtgatc gctgaagacg ccgtcctcct gcgggcgggc
      301 ctgacccgcc tcctggccga cgccggccat gaggtcgtcg ccgccgtggg cgacgccgag
      361 gccctgctcg aggccgtcga ggaccacaag cccgacatcg tcgtgaccga cgtccggatg
      421 ccgccgaccc acaacgacga ggggctgaag gcggccgtcg agctccgggc ccgccacccg
      481 cagctggcca tcctggtgtt gtcgcagtac gtcgaggagc gctacgccac cgagctcctc
      541 gtcggcgaca cccgggggct cggctatctg ctgaaggacc gggtggccga ggtcggcgag
      601 ttcgtcgacg ccgtcgagcg ggtcggcaac ggcggcaccg ccctcgaccc cgacgtcgtc
      661 gcccagctgc tggcccgcag ccggcgcgcc gaccccctgg ccgccctcac cccccgggag
      721 cgggaggtgc tccagctgat ggccgaaggc cggtccaaca ccgccatcgc ccaggcgctg
      781 gtggtcagcg aaggagcggt ggagaagcac accagttcga tcttcctcaa gctcaacctg
      841 gccccgaccg acagcgccgg ccaccggcgg gtcctggccg tcctgcggta cctggagggc
      901 tgacgtgcgg ctccgcctcc cgaagcgcct gtcccggtgg cccggccggc agggcgtggt
      961 ggccatcggg ctggtgatga cggcggcgtt ggtgggcttc gccgccctgg tggccgtcaa
     1021 cgccatggcc cgccagaccg tccgggagga gcacacctac gccttcaccg gatcgacggt
     1081 gtcgatcgac gccgagctcg gcgacgtcca gatcgtgccc ggccaggcgg gcgaggtcac
     1141 cgtctcccgc cggctgacct acgggctgcg gcgcccgttc gtgtccgagc gggccgacgg
     1201 cgacacgttc cgggtcgagg accggccctg cagcgccgaa gccgccttcc cctgccaggt
     1261 ccgctggctc ctgcaggtcc cgcgggacct caccgtcgag gtccagaccc ggggcggttc
     1321 gatcaccgtc aacgggctgc gggggaccat caagctcgtg tcgacgtcgg gggccgtgac
     1381 ggcgctcaac ccgagcggga agctcgtcac gttgcggtcc accagcggcc cggtcaaggc
     1441 ccagagcgtg agcagcgacc aggtggtggc caccagcacg gcgggcgacg tcaccgccac
     1501 gttccagacg ccgccgtcgc tgatgatcgg ccgcagccag accggccggg tcggcgtcgt
     1561 cctgcccacc ggcgacgacc actacgacat cagggccaag tcgcaggacg ggagcaagac
     1621 gatcgccctc tcgggggcca ccaacgaccc caacggccgc cggcggatcg acatcctgtc
     1681 cacctcgggc gacgtgtccg tcctccagag cccggagaac tgacagtcgg gcggcgacgc
     1741 ccggtcgaca agcagttccc agggaactcc cagaatcggc ggaggcggct cccaccgtcc
     1801 gggtcgatcg ttgggccatg aacggtcaat tcccctggta cgtcgcccgg tccgccggcc
     1861 tggtcgcctg ggccctgctg gcggcgtcgg tgctgtgggg cctggccctg tcgaccaagg
     1921 tcctcggccc gagggtccgg cccaactgga tgctcgacct gcaccgctgg ctcggcgggc
     1981 tggcgctgac cttcacgggc ctccacgtcg gggcgctgct cctcgacacc tacgtccact
     2041 tcgggctggt ctcggtgctc gtccccttcg ccacgtcctg gcaccccgcg gcggtggcct
     2101 ggggagtcgt ctcgctctac ctgctggccg ccgtcgaggt gacgtcgctg ctgcggtccc
     2161 gcgtcccgaa gtcggtgtgg cgcaagaccc acttcctcag cttcctgctc ttcgtgacgt
     2221 c
//
LOCUS       DATGJT010000096         4087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_738130, whole genome shotgun sequence.
ACCESSION   DATGJT010000096 DATGJT010000000
VERSION     DATGJT010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4087
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_738130"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..393)
                     /locus_tag="VKX24_01640"
     CDS             complement(151..393)
                     /locus_tag="VKX24_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HLJ07212.1"
                     /translation="MPITENPAQVLDCKGLSCPLPVIKTAQAIKTLEPGQVLELLATD
                     PGVEPDMKAWTTRTGNELLAIDQEGDVFHVFLRRNG"
     gene            487..855
                     /locus_tag="VKX24_01645"
     CDS             487..855
                     /locus_tag="VKX24_01645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07213.1"
                     /translation="MTVFDVRCDRCGVELTTPTEAVRFLYHPGDLLLKDDSGLLCRSC
                     WRAALAWLGVEQPEGACARCGVAVEHACSIHVQRTGDDTGWQLCPEHGVAFLNQLRTV
                     EPKLTVETLSLAGDWGRSQP"
     gene            852..1775
                     /locus_tag="VKX24_01650"
     CDS             852..1775
                     /locus_tag="VKX24_01650"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HLJ07214.1"
                     /translation="MNLNQVQIFCAVAKHLSFSMAAEELFITQPAVSQQVKALERQLN
                     VKLFERLGHKLFLTEAGEAVLTHCQAMLTTRAEMEQTLAMLRGSGRGRLALGANTTGG
                     MYVAPAIIRAFRDVSPEVEATLQIETTNRILERVMQNMIDVAIVTGPVEDRRFVIRDL
                     VDDEVQLIVSPSHPFAARTSVSPAEVAHEDFAVPEPGSRTRMLIEQAFLERGHRLRVT
                     MQLPGTEAVKKAVEANLAVAMVSRYSITREISLGVLNRVPIDGLVLDRPIHILHRKGK
                     HLSPLVRRFLGFASEYVAEADGTLKRLRKCE"
     gene            1859..3100
                     /gene="sat"
                     /locus_tag="VKX24_01655"
     CDS             1859..3100
                     /gene="sat"
                     /locus_tag="VKX24_01655"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013756931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HLJ07215.1"
                     /translation="MGVDNTLAPHGGPFTERVLDPAEGAKAIKGLTQVPVRGQIATEC
                     MGLAYGFFAPLTGFMKSEDVDGVAKAMRLSSGYVWSVPILFDLSPEQIAEQGIAEGQT
                     IVLTYQGQPLATLDVEEIYDYDKSFLAGQIYGTTEDAHPGVRRTFAYQDRFLGGPITL
                     VNPPQLSEPFNRFFFTPAQMRASFDELGWKKVVAYQSRNVPHVGHEWLMKSAWFASGA
                     DGVLVSAVIGEKKVGDSIDEAVILGQDMLREAGYFLPDVHKTSILLWDMRYAGPREAV
                     FHALVRKNLGCTHHMFGRDHAGVGKYYDPYASHRIFEEIPDIGIKPVLTLEWFYCPRC
                     GPGYERLCGHQDQKDPISGTWIRGLIKEGGKPDQQKFREEVFDTMLQAGRDFGNGSPF
                     VSEEYLQNRNPVLRVPPMAAE"
     gene            3113..3559
                     /gene="aprB"
                     /locus_tag="VKX24_01660"
     CDS             3113..3559
                     /gene="aprB"
                     /locus_tag="VKX24_01660"
                     /EC_number="1.8.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013683128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009973 - adenylyl-sulfate reductase
                     activity [Evidence IEA];
                     GO_process: GO:0019420 - dissimilatory sulfate reduction
                     [Evidence IEA];
                     GO_process: GO:0019424 - sulfide oxidation, using siroheme
                     sulfite reductase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate reductase subunit beta"
                     /protein_id="HLJ07216.1"
                     /translation="MPTFVHVEKCDGCRALAQPACMYICPNDLMSLDVSIGKGFNQEP
                     DLCWECYSCVKTCPQGAIEMRGYADVMPMGSRVTPLRGTDSIMWAIQYRNGEIKRFKY
                     PIRTTAWGSIDSTLGEPDPPEAGFRTQELIGEPKYLHIDALPTVNA"
     gene            3577..>4087
                     /locus_tag="VKX24_01665"
     CDS             3577..>4087
                     /locus_tag="VKX24_01665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ07217.1"
                     /translation="MPFEPAVETVECDVLIVGGGMAGCGAAFEAANWARGRGLRVVLV
                     EKAAIERSGAVAMGLSAINMYMGMQWGENTPEEFVRYVRQDLMGLSREDLVYDLARHV
                     DSSVHMFEEWGLPIFKNEDGHYKREGRWQIMIHGESYKPIVAEAAKNALGEGNLYERV
                     FVAHPLLDAD"
BASE COUNT          675 a         1409 c         1373 g          630 t
ORIGIN      
        1 catggtgaag tagatgccga cctcgacctc catcgccgcc gccgaggcag ccaggaagaa
       61 cggggtcgcg cagcgtcccg ggtcgctcac gccgtgcgtc tggacgtaga ggaccttgcc
      121 ctcaccctcg tcggtccaca tgggaacctc ctacccgtta cgccgcagga atacgtggaa
      181 gacgtcgccc tcctggtcga tcgccaggag ctcgttgccg gtccgcgtcg tccaggcctt
      241 catgtccggc tcgacgccgg ggtcggtggc caggagctcg aggacctgcc cgggctcgag
      301 cgtcttgatg gcctgcgccg tcttgatgac gggcaacgga cacgacaggc ccttgcagtc
      361 caggacctga gccggattct cggtgatagg catcggcacc cccctgttgc ctatatgcgc
      421 aagctctcat attgtcggcg gcgggtcaag ggtgtcggcc cgccagtagg cagaatggtg
      481 ccccagatga cggtgttcga tgtgcgatgc gaccgatgcg gggtggagct gaccaccccg
      541 accgaggccg tccgcttcct ctaccatccc ggcgacttgc tgctcaagga cgactccggc
      601 ctgctgtgcc gctcgtgctg gcgggcggcg ctggcctggc tcggggtcga gcagcccgag
      661 ggcgcctgcg cccggtgcgg ggtggcggtc gagcacgcct gcagcatcca cgtccagcgg
      721 acgggcgacg acaccggctg gcagctctgc ccggagcacg gcgtcgcctt cctcaaccag
      781 ctgcgcaccg tggagccgaa gctcaccgtc gagacgctct cgctggccgg ggactggggg
      841 cgttctcaac catgaacctc aaccaggtcc agatcttctg cgccgtggcc aagcacctga
      901 gcttctcgat ggccgccgag gagctgttca tcacccagcc ggccgtcagc cagcaggtca
      961 aggcgctcga gcgccagctc aacgtgaagc tcttcgagcg gctcgggcac aagctgttcc
     1021 tgaccgaggc cggcgaggcc gtcctcaccc actgccaggc catgctcacc acccgggcgg
     1081 agatggagca gacgctggcc atgctgcggg gctcgggcag gggccggctg gccctcgggg
     1141 ccaacaccac cggcggcatg tacgtcgccc cggccatcat ccgggccttc cgcgacgtct
     1201 cgccggaggt cgaggccacg ctgcagatcg agacgaccaa ccggatcctc gagcgcgtga
     1261 tgcagaacat gatcgacgtg gccatcgtca ccggtcccgt cgaggaccgc cgcttcgtca
     1321 tccgggacct cgtcgacgac gaggtccagc tcatcgtctc gccgtcgcac cccttcgccg
     1381 cccggacgtc ggtcagcccg gcggaggtag cccacgagga cttcgccgtc cccgagccgg
     1441 ggtcccgcac ccgcatgctc atcgagcagg ccttcctgga gcggggccac cgcctgcggg
     1501 tgacgatgca gctccccggg acggaggcgg tgaagaaggc ggtggaggcc aacctggcgg
     1561 tagccatggt ctcccgctat tcgatcaccc gggagatctc gctcggcgtc ctgaaccggg
     1621 tcccgatcga cgggctggtc ctcgaccgcc ccatccacat cctccaccgc aagggcaagc
     1681 acctctcgcc gctcgtccgg cggtttttgg ggttcgcctc cgaatacgtc gccgaggccg
     1741 acgggacact caagcgccta cgcaagtgtg aataagtaaa tcgtcgacgt ggcctgccaa
     1801 acccttattt gacccacccc cccgcgcgag ggaaggtgca ggaaaagggg ggcagagcat
     1861 gggcgtcgac aacacgctgg cgccccacgg cgggccgttc accgagcgcg tgctcgaccc
     1921 cgccgagggg gcaaaggcga tcaagggcct cacgcaggtg cccgtccggg ggcagatcgc
     1981 caccgagtgc atggggctgg cgtacggctt cttcgccccg ctcaccgggt tcatgaagtc
     2041 ggaggacgtc gacggtgtgg ccaaggccat gcgcctgtcg agcggctacg tgtggagcgt
     2101 gccgatcctc ttcgacctct cgccggagca gatcgccgag caggggatcg ccgaggggca
     2161 gacgatcgtc ctcacctacc agggccagcc cctggccacg ctcgacgtcg aggagatcta
     2221 cgactacgac aagtcgttcc tggccggcca gatctacggc acgaccgagg acgcccaccc
     2281 gggcgtgcgg cggacgttcg cctaccagga ccggttcctc ggcggcccga tcacgctggt
     2341 gaacccgccc cagctgtcgg agcccttcaa ccggttcttc ttcaccccgg cccagatgcg
     2401 ggcctcgttc gacgagctgg gctggaagaa ggtcgtggcc taccagtccc gcaacgtccc
     2461 ccacgtgggc cacgagtggc tgatgaagtc cgcctggttc gcctccggcg ccgacggcgt
     2521 gctcgtcagc gccgtcatcg gcgagaagaa ggtcggcgac tcgatcgacg aggccgtgat
     2581 cctcggccag gacatgctgc gggaggcggg gtacttcctg cccgacgtgc acaagacgtc
     2641 gatcctgctc tgggacatgc gctacgccgg gccccgggag gccgtcttcc acgccctcgt
     2701 ccgcaagaac ctggggtgca cccaccacat gttcggccgg gaccacgccg gggtcggcaa
     2761 gtactacgac ccctacgcct cgcaccggat cttcgaggag atccccgaca tcgggatcaa
     2821 gccggtgctg acgctggagt ggttctactg cccccggtgc gggccgggct acgagcggct
     2881 gtgcggccat caggaccaga aggacccgat cagcgggacg tggatccggg ggctcatcaa
     2941 ggagggcggc aagcccgacc agcagaagtt ccgcgaggaa gtgttcgaca cgatgctgca
     3001 ggccggccgg gacttcggca acggctcgcc gttcgtgtcc gaggagtacc tgcagaaccg
     3061 gaacccggtt ctccgtgtcc cgccgatggc ggccgagtag gggggcgaat cagtgccgac
     3121 gtttgttcat gtcgagaagt gtgacgggtg ccgggcgctg gcccaaccgg cctgcatgta
     3181 catctgcccg aacgacctga tgtcgctcga cgtcagcatc gggaagggct tcaaccagga
     3241 gcccgacctg tgctgggagt gctactcctg cgtgaagacg tgcccccagg gcgccatcga
     3301 gatgcggggc tacgccgacg tgatgccgat gggttcccgg gtcacgccgc tgcggggcac
     3361 cgactcgatc atgtgggcca tccagtaccg caacggtgag atcaagcggt tcaagtaccc
     3421 gatccgcacc accgcctggg gctcgatcga ctcgacgctc ggcgaaccgg acccgcccga
     3481 ggcggggttc cgcacccagg agctcatcgg cgagccgaag tacctccaca tcgacgccct
     3541 gcccactgtc aacgcctgat cccgggagcg tagaagatgc cgttcgaacc tgcggtcgaa
     3601 accgtcgagt gcgacgtcct catcgtcggc ggaggcatgg ccggctgcgg cgcggccttc
     3661 gaggccgcca actgggcccg ggggcggggc ctgcgcgtcg tcctggtcga gaaggcggcc
     3721 atcgagcgct ccggcgccgt ggccatgggc ctgtcggcca tcaacatgta catgggcatg
     3781 cagtggggcg agaacacgcc ggaggaattc gtccgctacg tgcggcagga cctcatgggc
     3841 ctctcccggg aggacctcgt ctacgacctg gcccgccacg tcgactcctc cgtccacatg
     3901 ttcgaggagt gggggctccc gatcttcaag aacgaggacg ggcactacaa gcgtgagggc
     3961 cgctggcaga tcatgatcca cggcgagtcc tacaagccga tcgtggccga ggcggccaag
     4021 aacgcgctgg gcgagggcaa cctctacgag cgggtcttcg tggcccaccc gctgctcgac
     4081 gccgacg
//
LOCUS       DATGJT010000097         2136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_531397, whole genome shotgun sequence.
ACCESSION   DATGJT010000097 DATGJT010000000
VERSION     DATGJT010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_531397"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1039)
                     /locus_tag="VKX24_01670"
     CDS             complement(<1..1039)
                     /locus_tag="VKX24_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine reductase"
                     /protein_id="HLJ07218.1"
                     /translation="MTADTAPVVSGAVQVLAHTPGLARFGSKPARTLPGRPDLAGRFA
                     ASLRGYGTAVAYPPHQAWIGACHPRDLPPRPWTATGAGDADGDGDGGGLRFGPDGEVM
                     PETEFLGLVAAADAFGLVTLAAGTGDAALAALGRHRLAKWFDLDRIALRCGDAEAAAA
                     EPGALAVRGSAGDGPVVAALRRAHDDDEALSGAVLLENLAGKATATLALLHLLDTSGI
                     DPASVEYVLGCGEEAVGDRYQRGGGNMAKAVAEAAGLTEASGVDVKDFCAAPIPALVV
                     AASLVAAGVFRRVAVVAGGSLPKLGMKFEGHLAHDLPVLEDVLAGAAALVEADDGTSP
                     RVRLGGVGRHRV"
     gene            complement(1074..1997)
                     /locus_tag="VKX24_01675"
     CDS             complement(1074..1997)
                     /locus_tag="VKX24_01675"
                     /inference="COORDINATES: protein motif:HMM:TIGR01918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(1353..1355),aa:Sec)
                     /transl_table=11
                     /product="glycine/betaine/sarcosine/D-proline family
                     reductase selenoprotein B"
                     /protein_id="HLJ07219.1"
                     /translation="MVGVGPTAREMASGLERLAAAARTVAAGGMLTAAEGRVGPVPRR
                     GVMATEPAAARAVDLLLARLAGDRDRTEVPLPAFDRVEPAAPVDDLADATVVLLTEGA
                     LVPEGNPDRLESARATRWQRYPLEGVDVLAPGRWRSVHGGFSTVWANEDPHRLLPLDA
                     ARELEREGAIGGVGGEYLVTVGNGTAVGTARRFGVEWAADVRRSGARAAILTATUGTG
                     TRCGSTLAKELERAGIPTALLCNLTGIAQRVGAPRIVPTRGIPYPTGDPALSPADERA
                     WRRRLVERALEALSTPVTGPTLFPLDGTGAG"
BASE COUNT          253 a          866 c          802 g          215 t
ORIGIN      
        1 cgacccggtg gcgtcccacc ccgccgaggc ggacccgggg cgacgtgccg tcgtcggcct
       61 ccaccagcgc cgccgccccg gccaggacgt cctcgaggac gggcaggtcg tgggccaggt
      121 ggccctcgaa cttcatgccg agcttcggca gcgaaccgcc ggccaccacc gccacccggc
      181 ggaacacgcc ggcggccacg aggctggccg ccaccaccag ggccgggatc ggagcggcgc
      241 agaagtcctt gacgtcgacc cccgacgctt cggtcagccc ggccgcctcg gccaccgcct
      301 tggccatgtt gccgccgccg cgctggtagc ggtcgccgac agcttcttcg ccgcagccga
      361 ggacgtactc gaccgacgcc gggtcgatgc ccgacgtgtc gagcaggtgg agcagcgcca
      421 gcgtcgccgt ggccttgccg gccaggttct cgagcagcac cgcacccgac agcgcctcgt
      481 cgtcgtcgtg ggcccggcgc agcgccgcca ccaccgggcc gtcgccggcc gaaccccgaa
      541 cggccagcgc gcccggctcg gcggccgccg cctcggcatc gccgcaccgc agcgcgatcc
      601 ggtcgagatc gaaccacttg gccagccggt ggcggccgag ggcggccagg gcggcgtcgc
      661 ccgtgccggc cgccagcgtg acgaggccga aggcgtcggc cgccgccacg aggccgagga
      721 actcggtttc gggcatgacc tcgccgtcgg gaccgaaccg gaggccgccg ccgtcgccgt
      781 cgccgtcggc atccccggcg ccggtggccg tccacggccg gggcggcagg tcgcggggat
      841 ggcaggcacc gatccacgcc tggtggggcg ggtaggcgac ggcggtgccg tagccccgca
      901 gcgaagcggc gaagcgcccg gccagatccg gccgcccggg aagcgtgcgg gccggcttgg
      961 aaccgaagcg ggccaggccc ggggtgtggg ccagcacctg gacggcgccc gacaccaccg
     1021 gcgcggtgtc cgccgtcacg aggcgcgtcg agcccggcgg gcgggagcag gggtcatccc
     1081 gcgccggtcc cgtccagcgg gaacagcgtc ggtccggtca ccggcgtcga cagcgcctcc
     1141 agcgcccgct ccaccagccg gcgccgccag gcccgctcgt cggccggcga cagcgccgga
     1201 tccccggtcg ggtaggggat gccccgggtg ggaacgatgc ggggcgcccc gacccgctgc
     1261 gcgatgccgg tcaggttgca cagcagcgcg gtggggatcc cggcccgttc cagttctttc
     1321 gccagcgttg acccgcaacg cgttcctgtc cctcaggtgg cggtgaggat cgccgcccgg
     1381 gccccggaac ggcgcacgtc ggccgcccac tccaccccga agcgccgggc cgtccccacc
     1441 gccgtgccgt tgcccaccgt caccaggtac tcgccgccca ccccgccgat cgccccttcc
     1501 cgctccagtt cccgggcggc gtcgaggggc aggaggcggt gggggtcctc gttggcccac
     1561 acggtggaga agccgccgtg caccgaccgc caccggccgg gggcgaggac gtcgacaccc
     1621 tcgagcgggt agcgctgcca gcgggtcgcc cgggccgact ccagccggtc gggattcccc
     1681 tcgggcacca gcgcgccttc ggtcagcagc accaccgtgg cgtcggccag gtcgtcgacc
     1741 ggcgccgccg gctccacccg gtcgaaggcc ggcagcggca cctcggtccg gtcccggtcg
     1801 ccggcgaggc gggccaggag caggtcgacg gcccgggcgg cggccggttc ggtggccatc
     1861 accccgcggc gggggacggg cccgacgcgc ccctccgccg cggtgagcat ccccccggcg
     1921 gccacggtgc gcgccgcggc ggccaggcgc tccaggcccg acgccatctc ccgggcggtc
     1981 ggcccgacgc ccaccacgaa ggcgtcgccg gcgtcctcga ggccggggtt gtcccgtgca
     2041 tggccgccac cgccgccacc ccggcggccg ccgcggcggc cgcgacccgg gcgcaggcca
     2101 ggccgtagcg gccgctgccg aaggccgggc cggcca
//
LOCUS       DATGJT010000098         2405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1360838, whole genome shotgun sequence.
ACCESSION   DATGJT010000098 DATGJT010000000
VERSION     DATGJT010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1360838"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(452..524)
                     /locus_tag="VKX24_01680"
     tRNA            complement(452..524)
                     /locus_tag="VKX24_01680"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(488..490),aa:Glu,seq:ctc)
     gene            700..963
                     /locus_tag="VKX24_01685"
     CDS             700..963
                     /locus_tag="VKX24_01685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003937950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLJ07220.1"
                     /translation="MRAEGTETPAASLQDVLRALAQERRTRGVSRTTVAARMATSERA
                     VARLETGAIDPHLSTVARFAEAIGKRVEWRLVDRDDGIEQADR"
     gene            966..2297
                     /locus_tag="VKX24_01690"
     CDS             966..2297
                     /locus_tag="VKX24_01690"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HLJ07221.1"
                     /translation="MRRPEPARRAGVDLTGPPRPAAEPARATSWPEPLQRLALALIRA
                     VSLDDVAAAAVAYGPIAAGAGCGHALLLDQGGGVAASLLGGPAVPSARLDHLALDAPL
                     PWNDAVHHNRTIAFPSTAAFYDAYPGLDSLVGLPTSGPVVTTPLVCVGECRGALTFGF
                     ERPAGGDRNRGGEDGGGPPVDALPEIAAVVGQAAAQAAIYASEHQSAELLQRAYMPAR
                     PSPLAGLSFATRYLPAGEPAAVGGDWYDVLPLPGPLVGLVIGDVAGHGLKAAAVMASL
                     RAALRAFAMVDACPARILARLNDYTCLYKPDAFATVFVAVFEPGAGRLRYARAGHPPA
                     LLVAGDGATDVLDGAVGPPLGVPGATYEPDERRFPGGASLVAYTDGLIERRDQSIDFR
                     LARLVEAAPAAAGGGPDGLCDWLVFELLAGQDLFDDAALLVATRQETPDGR"
BASE COUNT          290 a          924 c          859 g          332 t
ORIGIN      
        1 ggatccgccg gagctcggtt tcctcgcagt ccgatgagca gtgcgggccg cgaccgaggg
       61 ccttcgggta gatccgcccg cagatgtcac attgccgcat accaactcat cgaccgatcc
      121 cccggcccgg cttgagcgcc acgtcgcgat ggacgcagtt gccgccggag cgcaccagcg
      181 gtacgaggag cgcagaggcg tctcgaagtt cggcggctgt gcgccggacc tcctcggcgt
      241 cacggcgcac ccggatcgcc actgcgcaaa actcgaccgc tcgcagacgg gcggcacggg
      301 cctcagcgat ctggcgtcgg cggtccatgt gtgtgagccg ctacccgccg tccgaggcgt
      361 cgaagaccac gaactgctgt gtcccgtggc ggagcccgat tacagccaag gggccatcga
      421 aatggcccct gactgacctg atctttcttt gcagccccaa cgggattcga acccgtgtct
      481 ccaccttgag agggtggtgt cctaggcccc tagacgatgg ggccaagccg gcgagcggcc
      541 tggtttttcg ctcctgaccg gcgattttgt ctgtgccggc caggcgcccg gacattctag
      601 ggggcgggac tgccgggccc gccacccggc gtgtcgtttc cgccctccgc cagccgggta
      661 gcgaccggtc agcggtgacc ggccacgaag ggacgacgga tgcgggcgga aggcacggag
      721 acaccggccg cgtcgctgca ggacgtcctc cgggccctgg cgcaggaacg gcggacccgg
      781 ggtgtgtccc ggacgacggt ggcggcccgc atggccacct cggagcgggc ggtggcccgg
      841 ctggagaccg gggcgatcga tccccacctg tcgacggtgg cccgcttcgc cgaggccatc
      901 ggcaaacggg tggagtggcg gctcgtcgac cgcgacgacg gcatcgaaca ggcggaccgc
      961 tgacgatgcg ccgccccgaa ccggcccggc gcgccggcgt cgatctgacg gggccgcccc
     1021 gccccgccgc cgaaccggcc cgggcgacgt cgtggcccga gccgctgcag cggctggcgc
     1081 tggccctcat ccgggcggtc tccctcgacg acgtcgccgc cgccgcggtc gcctacgggc
     1141 ccatcgccgc cggcgccggg tgcggacacg ccctcctcct cgaccagggg ggcggggtgg
     1201 cggcctcgct cctcgggggc ccggccgtgc cgtcggcccg gctcgaccac ctcgccctcg
     1261 atgctcccct gccgtggaac gacgccgtcc accacaaccg gacgatcgcc tttccctcga
     1321 ccgcggcgtt ctacgacgcc tatcccgggc tggactcact ggtcgggctt ccgacgtcgg
     1381 ggccggtggt caccacgccg ctggtctgcg tcggggagtg ccgcggcgcc ctcaccttcg
     1441 gcttcgagcg gccggccggc ggcgaccgca accgcggcgg cgaggacggc ggcggccccc
     1501 cggtcgatgc cctgccggag atcgccgcgg tcgtcggcca ggccgcggcc caggcggcga
     1561 tctacgccag cgagcaccag tccgccgaac tgctgcaacg ggcctacatg ccggcccgtc
     1621 cctcgccgct ggccggcctg tcgttcgcca cccgctacct accggccggt gaaccggcgg
     1681 ccgtcggcgg cgactggtac gacgtccttc ccctgcccgg cccgctcgtc ggactggtga
     1741 tcggcgacgt ggccggccac ggcctcaagg cggcggcggt catggcatca ctgcgggcgg
     1801 cgctgcgggc cttcgccatg gtcgacgcct gcccggcccg gatcctggcc cggctgaacg
     1861 actacacctg cctctacaag cccgacgcct tcgccacggt cttcgtcgcc gtgttcgagc
     1921 ccggggccgg gcggctccgg tacgcccggg ccggccatcc gccggcgctg ctggtggccg
     1981 gcgacggcgc caccgacgtc ctcgacggcg cggtcggccc gccgctcggc gttccggggg
     2041 ccacctacga gccggacgag cggcgcttcc cgggcggcgc ctcgctggtg gcctacaccg
     2101 acggtctgat cgagcgccgg gaccagtcca tcgacttccg gttagcccgg ctcgtggagg
     2161 ccgctccggc ggccgccggt ggaggccccg acgggctctg cgactggctc gtcttcgagc
     2221 tgctcgccgg acaggacctc ttcgacgacg ccgcgctgct cgtggccacc cggcaggaga
     2281 cgcccgatgg ccggtgaggg cccgtcggcc cgccggcacc attccgtggt ccccgaacgg
     2341 gcggccgtcc tcctccgggt cggcaccagc ctcgggccgg tcagcttcgg cgccaacggg
     2401 ctcga
//
LOCUS       DATGJT010000099         2523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_116311, whole genome shotgun sequence.
ACCESSION   DATGJT010000099 DATGJT010000000
VERSION     DATGJT010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116311"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VKX24_01695"
     CDS             <1..245
                     /locus_tag="VKX24_01695"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006201396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HLJ07222.1"
                     /translation="QRRGIQLRSVTATLTGDMSVLGVLGADPDIRNGFRGIEVHFDID
                     ADAPPADVEALVAGSQKRSAVYDALTNPTPVTVSVN"
     gene            245..1507
                     /locus_tag="VKX24_01700"
     CDS             245..1507
                     /locus_tag="VKX24_01700"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ07223.1"
                     /translation="MRTTTVIIGAGHAGLAMSRRLTERSIDHVVLERGEVANSWRRER
                     WPSLRLLTPNWQTRLPGAAYEGDDPDGFATMPEVIRFLQGFADLVAAPVRTQTAVTGL
                     RTEGPGYEVATTQGVWRCDSVVLASGACNRPVIPDVATAVPPSVAMVTPMSYRGPETL
                     DDRGVLVVGASATGVQLADEIHRSGRPVTLAAGEHVRLPRRYRGRDIFWWMERAGVLD
                     QRHDEVDDLVRARRVPSPQLVGSPQRVTLDLNTLGARGVRIVGRLAGIAGGVAQFSGS
                     LPNICKLADLKLNRLLDTFDAWAGAGGLDGEIDPPQRFAPTAVPSSDLTLDLRRADIG
                     TVVWACGYRPDYSWLHVPVLDRKGRIVHDGGVVRDAPGVYLLGMPFLRRRRSSFISGA
                     DDDTRDLADHLQRRLAGRRIGTRLSAST"
     gene            1598..1813
                     /locus_tag="VKX24_01705"
     CDS             1598..1813
                     /locus_tag="VKX24_01705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07224.1"
                     /translation="MDQELSEPEIEAAEDLAPEHRHDDVDAAGLADHVRKVHKLDVPE
                     HLSTSTVGGLHDRVHQQADAADDPPDE"
     gene            complement(1835..2221)
                     /locus_tag="VKX24_01710"
     CDS             complement(1835..2221)
                     /locus_tag="VKX24_01710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003990900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HLJ07225.1"
                     /translation="MAGDGLSAAERAALADLIASERAKTAAQIEGLTRDFEGIVEWSE
                     TPPDDEHDPEGATLAFERAQVTALLSHARAQLADLERALKLLGDGEYGRCRGCGQNIG
                     FERLMARPTAHTCLQCAADTPPRRRG"
BASE COUNT          359 a          960 c          858 g          346 t
ORIGIN      
        1 cccagcggcg gggcatccag ctccggtcgg tcaccgccac gctcaccggc gacatgagcg
       61 tgctcggcgt gctcggcgcc gatcccgaca tccgcaacgg cttccgcggg atcgaggtcc
      121 acttcgacat cgacgccgac gccccgccgg ccgacgtcga ggcgctggtg gccgggtcgc
      181 agaagcgctc cgcggtctac gacgccctca ccaaccccac gccggtcacc gtcagcgtga
      241 actgatgcgc accaccacgg tcatcatcgg cgccgggcac gccgggctgg ccatgagccg
      301 ccgcctcacc gaacgctcga tcgaccacgt ggtcctcgag cgcggtgagg tggcgaactc
      361 gtggcggcgg gagcggtggc cgtcgctgcg gctgctcacg cccaactggc agacccgcct
      421 gccgggcgcg gcctacgagg gcgacgaccc cgacgggttc gccacgatgc cggaggtgat
      481 ccggttcctc cagggtttcg ccgacctggt cgccgccccc gtacggacgc agacggccgt
      541 gacggggctg cggaccgaag gtcccggcta cgaggtcgcc accacgcagg gcgtgtggcg
      601 ctgcgacagc gtcgtgctgg ccagtggcgc ctgcaaccgc ccggtgatcc cggacgtggc
      661 caccgccgtg ccaccgtcgg tggccatggt cacgccgatg agctaccgcg gccccgagac
      721 actggacgac cgcggcgtcc tcgtcgtcgg cgcctcggcc accggggtgc agctggccga
      781 cgagatccac cggtcgggcc gtccggtgac cctggccgcc ggggagcacg tccgcctccc
      841 ccgccgctac cgggggcgag acatcttctg gtggatggaa cgggccggcg tcctcgacca
      901 gcgccacgac gaggtcgacg acctcgtccg ggcccgccgc gtcccctcgc cccagctggt
      961 cgggagcccg cagcgggtca ctctcgacct caacaccctc ggtgcccgcg gcgtccgcat
     1021 cgtcggccgg ctggcgggga tcgccggtgg cgtggcccag ttctcgggat cgctgcccaa
     1081 catctgcaag ctggccgacc tgaagctgaa ccgcctcctc gacaccttcg acgcctgggc
     1141 cggcgccggc ggcctcgacg gcgagatcga cccgccgcaa cggttcgccc cgaccgccgt
     1201 gccgtcctcc gacctgaccc tcgacctccg ccgggccgac atcgggacgg tcgtctgggc
     1261 ctgcggttac cggcccgact actcgtggct gcacgtgccc gtcctcgacc ggaagggccg
     1321 gatcgtccac gacggcggcg tcgtgcgcga cgctcctggc gtctacctcc tgggcatgcc
     1381 cttcctccgc cgccgtcggt ccagtttcat cagcggggcc gacgacgaca cccgcgatct
     1441 ggccgaccac ctccagcgcc ggctcgccgg ccgtcgcatc ggcacccggc tctcagcctc
     1501 gacctgaccg gcgcggccgg ggctgacggt gattcggtgc ggacgggcac cgatggcacg
     1561 cagcatgacg gtacgcctcc tgggtacaaa cgggttcatg gatcaggagc tctccgagcc
     1621 cgagatcgag gccgcggaag acctcgcgcc ggagcaccgt cacgacgacg tcgacgccgc
     1681 ggggctggcg gaccacgtcc ggaaggtgca caagctcgac gtgcccgagc atctgagcac
     1741 ctcgaccgtc ggaggcttgc acgaccgggt gcaccagcag gccgacgccg ccgacgaccc
     1801 cccggacgag tagctgcctg ttgtcgtccg ccgttcaccc tcgccgtctt ggtggcgtat
     1861 cggcggcgca ctgcaagcag gtatgcgccg tcgggcgcgc catcaggcgt tcgaagccga
     1921 tgttttgacc gcacccccgg cagcgtccgt actcgccgtc gcccagcagc ttcagggcac
     1981 gctcgaggtc cgccagttgg gcacgggcgt ggctcagtag ggcggtgacc tgagcccgct
     2041 cgaacgccag cgtcgccccc tccggatcgt gttcgtcatc gggtggggtc tccgaccact
     2101 cgacgatgcc ctcgaagtcg cgggtgaggc cctcgatctg agcggcggtc ttggcccgtt
     2161 ccgacgcaat cagatcggcg agggccgccc gttcagccgc cgagagcccg tcgccggcca
     2221 tccctcgaca ttaccggtcg tgcaccgctt ccccaccgga gaacgccggt agctccggga
     2281 ccttggccgg ggagcaggcg atgaccgcgg cgtcgcggag gatggcggac tcgggcaccg
     2341 atcccggggt cggagcggtc tgagcgtcat cgccgtcccc gccggcgccg acccacgctc
     2401 gagaaccacc ccgtccccac gaacgggaac ccgggggcag aaaacgtttc catggaaacg
     2461 cgcgcggcgg atccaggcat gcacggactg gcagccggaa ccgtgtaaag catcaaccga
     2521 acc
//
LOCUS       DATGJT010000100         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_116380, whole genome shotgun sequence.
ACCESSION   DATGJT010000100 DATGJT010000000
VERSION     DATGJT010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116380"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VKX24_01715"
     CDS             complement(<1..425)
                     /locus_tag="VKX24_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07226.1"
                     /translation="MRNTRLLSVVALGVVPLVVASCGSDSGGKAADKVASTATTAPAV
                     TGPQTYSVVVDGPSTLGAENYVYGAFFPKTVSVRPGDTVNFENRSSNDIHTVTFGVKG
                     DRTDSPALVTKAGQPNPAVFGPCFTTQPAGPDVLSCPPLA"
     gene            462..2144
                     /gene="ilvD"
                     /locus_tag="VKX24_01720"
     CDS             462..2144
                     /gene="ilvD"
                     /locus_tag="VKX24_01720"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014742430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HLJ07227.1"
                     /translation="MADAHKPRSKDVTEGMERAPARAMLRAVGMGDDDWGRSQVGIAS
                     SWNEVTPCNLPLARLAKAAKEGVKAAGGFPLEFTTIAVSDGISMGTEGMRASLSSREL
                     IADSVECMMHGERFDGMVTLAGCDKSLPGMLMACARLNLPAVFLYGGSIMPGRYAERD
                     ISIQDVFEAVGACAAGIISRDDLGDIERAACPGEGSCAGMFTANTMSSIGEAIGMSLP
                     GSATPAAIDPRRDALAHASGEAVVNLLQLGIRPRQIMTREAFENAIAVSMALGGSTNA
                     VLHLLAIAHEARVDLVIDDFDRISRKVPHIGDTKPAGRYHMIDLDRIGGIPVVMRELL
                     EAGLLHGDCLTVTGKTVAENLDALNPGPPDGNVLRPLAEPIHPQGGTGILYGSLAPEG
                     AVVKIAGMDGLRFEGNARVFDDETDCMSYVTGGRCQPGDVLIIRYEGPKGGPGMREML
                     AVTAAVKGTGHSKDVALVTDGRFSGATHGFSVAHVAPEATDGGPIAFVEDGDPIVIDV
                     PNRKLDVLVDEATMAKRREGWKPKDPRYTSGFLAKYARLVQSASRGAITNIG"
     gene            2159..>2369
                     /locus_tag="VKX24_01725"
     CDS             2159..>2369
                     /locus_tag="VKX24_01725"
                     /inference="COORDINATES: protein motif:HMM:NF013328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HLJ07228.1"
                     /translation="MPELIEVERYRRLAEQALERRIAEVVAPDAWWLKGGLSAAVLSD
                     ALLGRHFLAARRTGKRIMLDTSDEGP"
BASE COUNT          349 a          868 c          824 g          328 t
ORIGIN      
        1 gccagcggcg ggcacgacag cacgtcgggg ccggcgggct gggtggtgaa gcacggcccg
       61 aacaccgccg ggttgggctg gccggccttc gtcacgagcg ccggcgagtc ggtccggtcg
      121 cccttcaccc cgaaggtcac cgtgtggatg tcgttcgacg agcggttctc gaagttgacg
      181 gtgtcgccgg ggcggaccga caccgtcttc gggaagaacg cgccgtagac gtagttctcg
      241 gcgccgagcg tcgaggggcc gtcgaccacc accgaatagg tctgcggccc ggtcaccgcc
      301 ggtgccgtgg tggccgtcga ggccaccttg tcggcggctt tgccgccgga gtcggaaccg
      361 cacgaagcca ccaccaacgg gacgactccg agcgcgacga ccgacaacag ccttgtgttc
      421 cgcatggctc ccccttctct cggggcccta ccctgtcgtt catggccgac gcgcacaagc
      481 cccgtagcaa ggatgtgacg gaaggtatgg agcgggcccc cgcccgggcg atgctccggg
      541 cggtggggat gggcgacgac gactggggcc ggtcccaggt cggcatcgcc tcctcctgga
      601 acgaggtcac cccctgcaac ctgccgctgg cccggctggc caaggcggcc aaggagggcg
      661 tgaaggcggc cggcggcttc ccgctggaat tcaccaccat cgccgtctcc gacgggatct
      721 cgatggggac ggaggggatg cgggcctcgc tgtcgtcccg ggagctcatc gccgactcgg
      781 tcgagtgcat gatgcacggc gagcgtttcg acggcatggt gacgctggcc ggctgcgaca
      841 agagcctccc cggcatgctg atggcctgcg cccggctcaa cctgccggcc gtgttcctct
      901 acggcgggtc gatcatgccc ggccgctacg ccgagcggga catcagcatc caggacgtct
      961 tcgaggccgt cggcgcctgc gccgccggga tcatcagccg cgacgacctc ggcgacatcg
     1021 agcgggccgc ctgccccggc gaggggtcct gcgccgggat gttcaccgcc aacaccatgt
     1081 cgtcgatcgg cgaggccatc ggcatgtcgc tgcccggatc ggccacgccg gcggccatcg
     1141 acccccgccg cgacgccctg gcccacgctt cgggcgaggc cgtcgtgaac ctcctgcagc
     1201 tcgggatccg gccccggcag atcatgaccc gggaggcgtt cgagaacgcc atcgccgtgt
     1261 cgatggccct gggtggatca accaatgccg tcctgcacct cctggcgatc gcccacgagg
     1321 cccgcgtcga cctcgtgatc gacgacttcg accgcatctc ccgcaaggtc ccccacatcg
     1381 gcgacaccaa gcccgccggc cggtaccaca tgatcgacct cgaccggatc gggggcatcc
     1441 ccgtcgtcat gcgggagctc ctcgaggcgg gcctgctcca cggcgactgc ctgacggtga
     1501 ccgggaagac cgtggccgag aacctcgacg ccctcaaccc cggcccgccg gacgggaacg
     1561 tcctccgccc gctggccgag ccgatccatc cccagggcgg caccggcatc ctctacggct
     1621 cgctggcccc cgagggcgcg gtcgtgaaga tcgccgggat ggacggcctg cgcttcgagg
     1681 gcaacgcccg ggtcttcgac gacgaaaccg actgcatgag ttacgtgacc ggcgggcgct
     1741 gccagcccgg cgacgtcctc atcatccgct acgagggccc caagggcggc ccgggcatgc
     1801 gggagatgct ggccgtcacc gctgccgtca aggggacggg ccactcgaag gacgtcgccc
     1861 tcgtgaccga tggccgcttc tccggcgcca cccacggctt ctcggtggcc cacgtcgccc
     1921 ccgaggcgac cgacggcggc ccgatcgcct tcgtggagga cggcgacccg atcgtcatcg
     1981 acgtccccaa ccggaagctc gacgtcctcg tcgacgaggc gacgatggcc aagcgccggg
     2041 agggctggaa gcccaaggac ccccgctaca ccagcgggtt cctggccaag tacgcccggc
     2101 tggtccagtc ggcgtcccgg ggggcgatca ccaacatcgg ctgaggggtg ccccggcttt
     2161 gcctgagctc atcgaggtcg agcggtaccg gcggctggcc gaacaggcgc tggagcgcag
     2221 gatcgccgag gtcgtggcgc ccgacgcctg gtggctgaag ggcgggctgt cggccgccgt
     2281 cctctccgac gccctcctcg gccggcactt cctggccgcc cgccggaccg gcaagcggat
     2341 catgctcgac accagcgacg aggggcccg
//
LOCUS       DATGJT010000101         3433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_220112, whole genome shotgun sequence.
ACCESSION   DATGJT010000101 DATGJT010000000
VERSION     DATGJT010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220112"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..734
                     /locus_tag="VKX24_01730"
     CDS             <1..734
                     /locus_tag="VKX24_01730"
                     /inference="COORDINATES: protein motif:HMM:NF013397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HLJ07229.1"
                     /translation="RLTRTWPGLLATGMVGGLDVGVGVLGLLLVKEATGSELLAALAF
                     GIGFMALTLAQSELFTENFLVPVAAVTARRASAAKLVRLWFGTAVMNLVGGWVITGLI
                     VAGLPKVRHTAVAIATEYARFPAGQAFALAILGGLVITLMTWMERATESVPAKVAAAF
                     AAAFLLVAGTLDHAIVVSLLMFAALHAGAPFGYLHWLGVVALATVGNMIGGLGFVTVL
                     RLVQVGHERIEEAQEEGAGREPLRA"
     gene            complement(775..1443)
                     /gene="ribB"
                     /locus_tag="VKX24_01735"
     CDS             complement(775..1443)
                     /gene="ribB"
                     /locus_tag="VKX24_01735"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HLJ07230.1"
                     /translation="MSLSQHGKGDVLTGEQSVVDAVRRIRRGEMVLVSDGPDREDEAD
                     LTMAAQWVTPESIAFMLRHGRGLVCMPCDGARLDRLGIGPMVSDAGCDTAFTVSIDHR
                     SVGSGISAADRSATIRAVLDPWAGAADFVRPGHVFPLRAREGGVLVRTGHTEAAVDLV
                     RLAGLAPCAVICEVLNDDGTIARGPELDRLAAEQDLARVTIEDLVAYRRATARPGVRV
                     SLVT"
     gene            complement(1440..2456)
                     /locus_tag="VKX24_01740"
     CDS             complement(1440..2456)
                     /locus_tag="VKX24_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011597305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ07231.1"
                     /translation="MKPSLRRPLDGLPSIKWKLGAVIVAAVLVTVVVVDLGVRAGVSP
                     VLSGLAAGSLSILMVQVLARGMTSPLREMAAASRAMARGDLARRVTASSRDEVGELAR
                     AFNAMAAELAEVDRMRRDLVANVSHELRTPITALQAGLENLVDGVEPPGPEQLRTMLK
                     QAERLGRLVTQLLDLSRLESGALPLQRSAFAVRPVLEDAADESRLHAPHVQVSVSVDE
                     PGLVADGDPERVHQVVANLLENAIRHSPAGGKVEVRAHPDKGRVAIEVLDEGPGIPEE
                     EASRVFERFYRADTARSSSAGGAGLGLAIARWIVDLHGGDIRAERRVPTGCRMVVLLP
                     GAAR"
     gene            complement(2453..3196)
                     /locus_tag="VKX24_01745"
     CDS             complement(2453..3196)
                     /locus_tag="VKX24_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007574431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07232.1"
                     /translation="MARVVVIEDEEPIAAAVAARLRSEGFDVDVAGDGPSGVALVERA
                     RPDLVVLDLMLPGFDGLEVCRRIQKDRPVPVLMLTARDSETDLLVGLAVGADDYLTKP
                     FSPRELVARVHAILRRVVRSGEAGAAADPAGRVLRLGRVALEPATRRATLDGEPVHLT
                     PTEFDILALLGDKPGVVFTREQLLADIWGYRDGFGARTVDSHVQALRRKLGAGVIRTV
                     HGVGYAAGDEERTPRKPGVRGVPEKNGRQ"
     gene            3294..>3433
                     /locus_tag="VKX24_01750"
     CDS             3294..>3433
                     /locus_tag="VKX24_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011566111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HLJ07233.1"
                     /translation="MIRYGFTLMTELHGPRQLVEQAVAAERAGFDFAAMSDHFHPWLE
                     AQG"
BASE COUNT          450 a         1250 c         1274 g          459 t
ORIGIN      
        1 accgcctgac ccgcacctgg cccggcctgc tcgccaccgg gatggtcggc ggcctcgacg
       61 tcggcgtcgg tgtgctcggc ctgctgctgg tgaaggaggc gacagggagc gagctgctgg
      121 cggcgctggc cttcggcatc gggttcatgg ccctgacgct ggcccagagc gagctgttca
      181 ccgagaactt cctggtgccg gtggccgccg tcacggctcg gcgggcctcg gcggcgaagc
      241 tcgtgcggct gtggttcggg acggcggtga tgaacctcgt cggcgggtgg gtcatcaccg
      301 gcctcatcgt cgccgggctg cccaaggtgc ggcacaccgc ggtggcgatc gccaccgagt
      361 acgcccgctt ccccgccgga caggccttcg ccctggccat cctcggcggt ctggtgatca
      421 ccctcatgac gtggatggag cgggccaccg agtcggtccc ggccaaggtc gccgccgcgt
      481 tcgccgccgc cttcctgctg gtggccggca ccctcgacca tgccatcgtg gtgtcgctgc
      541 tgatgttcgc cgcgctgcac gccggggcgc cgttcggcta tctccactgg ctcggcgtcg
      601 ttgccctggc cacggtcggg aacatgatcg gcgggctcgg gttcgtcacg gtgctgcggc
      661 tggtgcaggt gggccacgag cggatcgagg aggcccagga ggagggcgcg ggccgcgaac
      721 cgttgcgggc gtaatcggcg aaaccccggg ggtggggcgg ctcccccgga aacgttacgt
      781 aacgagcgaa acgcgaacgc ccggccgggc ggtggcccgc cggtaggcga cgaggtcctc
      841 gatcgtcacc cgggccaggt cctgctcggc ggcgaggcgg tcgagttcgg gcccccgggc
      901 gatggtgccg tcgtcgttga ggacttcgca gatgacggcg cagggcgcca gcccggccag
      961 ccggacgagg tcgacggccg cctcggtgtg gcccgtccgc accaggacgc cgccctcccg
     1021 ggcccggagc gggaacacgt gccccggccg gacgaagtcc gccgccccgg cccaggggtc
     1081 gaggacggcc cggatggtgg ccgaccggtc ggcagccgag atgccgctcc ccacgctgcg
     1141 atggtcgatc gagaccgtga aggcggtgtc gcagccggcg tcgctgacca tcggcccgat
     1201 gccgagccgg tcgagacggg cgccgtcgca cggcatgcag acgaggccgc ggccgtggcg
     1261 gagcatgaag gcgatcgact ccggggtcac ccattgggcg gccatcgtga ggtcggcttc
     1321 gtcctcccgg tcggggccgt ccgagacgag caccatctcg ccccggcgga tgcgccgcac
     1381 ggcgtcgacc acggactgtt caccggtcaa gacgtcgccc tttccatgtt gggagaggct
     1441 caccgcgccg ccccgggcag cagcacgacc atgcggcagc cggtcggcac ccgccgctcg
     1501 gcccggatgt cgccgccgtg gaggtcgacg atccagcggg cgatggccag cccgaggccg
     1561 gcccctcccg cgctcgacga gcgggccgtg tcggcccggt agaagcgttc gaacacccgg
     1621 ctcgcctcct cctcggggat ccctggcccc tcgtccagta cctcgatggc cacccggccc
     1681 ttgtccggat gggcccggac ctcgaccttt cccccggcgg gagagtgccg gatggcgttc
     1741 tcgagcaggt tcgccaccac ctggtggacc cgctcggggt cgccgtcggc caccagcccc
     1801 ggctcgtcca ccgacaccga gacttgcaca tggggggcgt gcaggcggga ctcgtcggcg
     1861 gcgtcctcca gcaccggccg caccgcgaag gcgctccgct ggagcgggag ggcccccgac
     1921 tccagccggg agaggtcgag cagctgggtc acgaggcgcc cgagccgctc ggcctgcttg
     1981 agcatcgtgc ggagctgctc cggccccggg ggctcgacgc cgtcgaccag attctcgagc
     2041 ccggcctgga gggcggtgat cggcgtccgc agctcgtgcg acacgttggc caccaggtcg
     2101 cgccgcatcc ggtcgacctc ggccagctcg gcggccatgg cgttgaaggc ccgggccagt
     2161 tcgccgacct cgtcccggga gctggccgtc acccgccggg ccaggtcgcc ccgggccatg
     2221 gcccggctgg cggcggccat ctcccgcagc ggcgaggtca tgccccgggc cagcacctgg
     2281 accatgagga tcgacaggct gccggcggcc aggcccgaca gcaccggcga cacgccggcc
     2341 cgtacgccga ggtcgaccac cacgacggtg acaagcaccg cggccacgat caccgctccg
     2401 agcttccact tgatcgacgg caggccgtcg agcggccggc ggagggaagg cttcactgac
     2461 gcccgttctt ttcggggaca ccccgcaccc cgggcttccg gggggtgcgc tcctcgtctc
     2521 ccgcggcgta tccgacgccg tggaccgtgc ggatgacgcc ggccccgagc ttgcggcgca
     2581 gcgcctggac gtgggagtcg accgtacggg cgccgaaacc gtcgcggtaa ccccagatgt
     2641 cggccagcag ctgctcccgg gtgaacacga cgccgggctt gtccccgagc agggccagga
     2701 tgtcgaactc cgtcggcgtg agatggacgg gctcgccgtc gagggtggcc cgccgggtgg
     2761 ccggctcgag cgccacccgg cccaggcgca gcacccggcc ggcagggtcg gcggcggccc
     2821 cggcctcgcc cgagcggacc acgcgccgga ggatggcgtg gacccgggcc acgagctccc
     2881 gggggctgaa cggcttcgtc aggtaatcgt cggctcccac ggccaggccg acgaggaggt
     2941 cggtctcgga gtcgcgggcc gtcagcatga ggacgggcac cggccggtcc ttctggatcc
     3001 gccggcagac ctcgaggccg tcgaagccgg ggagcatgag gtcgaggacg acgaggtcgg
     3061 ggcgggcccg ctccaccagg gccacgccgg acgggccgtc gcccgccacg tcgacgtcga
     3121 agccctcgct ccgcagccgg gcggccacgg cggcggcgat gggttcctcg tcctcgatca
     3181 ccacgacccg ggccacacct ttgacgatac gggaaggccc gcggggaccg ctcagggacg
     3241 atgtggagat ttctcggaga tcgaccacgc ccggggcggg taggggcgtt tccatgatcc
     3301 gctacggctt cactctcatg accgagctcc acggcccccg ccagctggtc gagcaggcgg
     3361 tggcggccga gcgggcgggg ttcgacttcg ccgccatgtc ggaccatttc cacccctggc
     3421 tcgaagcaca ggg
//
LOCUS       DATGJT010000102         2841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_116563, whole genome shotgun sequence.
ACCESSION   DATGJT010000102 DATGJT010000000
VERSION     DATGJT010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116563"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VKX24_01755"
     CDS             complement(<1..596)
                     /locus_tag="VKX24_01755"
                     /inference="COORDINATES: protein motif:HMM:NF015825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB
                     domain-containing protein"
                     /protein_id="HLJ07234.1"
                     /translation="MNPSARRLALGCLVAGTVLGGLVPALPAGAGPAVLGADPAVGGI
                     TRPDAAPAPSDSTAVELLDRAREAAESQPFDGVVDVEWRDRHTQHSAQVAVHSAGGVL
                     RFGDEVIGAGARRLIHGSGGWLTLWGHDVAALGPPPTTKYHLSVEDGPAVAGRPTDLI
                     LVQLAGTDRLRERLYLDRQSGLLLRRELINSRGQPSRSV"
     gene            complement(593..1087)
                     /locus_tag="VKX24_01760"
     CDS             complement(593..1087)
                     /locus_tag="VKX24_01760"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HLJ07235.1"
                     /translation="MIPSGPTGPPGEHLGDALSAFLDDELAPAARREAETHLAGCSDC
                     RAELEEVAAARRAIRIMPVHATRRALWGEDPGGAVPGPSGGPGEGWPGLTSRRPAAAR
                     RRRAAWALAAAVAAAIALLLPRDPSVAPSLPSLADTHAARASVTGDPLSQLAPIAVPV
                     SFGP"
     gene            complement(1084..1575)
                     /locus_tag="VKX24_01765"
     CDS             complement(1084..1575)
                     /locus_tag="VKX24_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005453736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07236.1"
                     /translation="MTGEVPTWEEVARTYGRFLYNVAYRLTGNDDDAFDLVQEALLRV
                     RKGLETYRPGSMEGWLSRIVTNVFLDEVRRKRRRPVEVLPEDPERLLPSSPGADEPTD
                     TLSDEVQAALRRLPEEFRTAVVLCDVVGLSYEEIADAIAVPVGTVRSRIHRGRRLLRE
                     ALQ"
     gene            complement(1662..1850)
                     /gene="tatA"
                     /locus_tag="VKX24_01770"
     CDS             complement(1662..1850)
                     /gene="tatA"
                     /locus_tag="VKX24_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013703874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HLJ07237.1"
                     /translation="MAGLGAPELIIILIIVMLLFGGAKLPKLARSLGESSREFRKGLA
                     EGTGSADEPESKSPDTKS"
     gene            complement(1966..>2841)
                     /locus_tag="VKX24_01775"
     CDS             complement(1966..>2841)
                     /locus_tag="VKX24_01775"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ07238.1"
                     /translation="SLWVSDHVSLSIERYGGPPGEQFAYEPLTTLAALAGVVSGPRLG
                     TLVLSEALRPAGVLAKALATLDRLCRGRLDIGIGAGWYAPDYEAVGLSLPPPAERLAR
                     LREALAVLDALLPGGPASLNGKAHIVRGATNLPPALQAPRPPIFVGGKGNRLLRLVAE
                     MADGWNTCWVWTPEDYRQRASVLDRACEDAGRDPASVRRTVGLYALAGEDERDLAARY
                     ERMRKNAPGGMLDGVALDEWRTGRLVGTVEEIAEQVAGWAALGVAELIVSAGPLPFSI
                     SGLDDLEMLKLALGS"
BASE COUNT          387 a         1041 c         1075 g          338 t
ORIGIN      
        1 accgaccgcg acggctggcc ccgggagttg atcagctccc ggcgcagcag cagtccgctc
       61 tggcggtcga ggtagaggcg ttcccggagc cggtcggtgc cggcgagctg cacgaggatc
      121 agatccgtgg ggcggccggc caccgcgggt ccgtcctcca ccgacaggtg gtacttcgtc
      181 gtcggaggcg gcccgagggc ggcgacgtcg tggccccaga gggtaagcca cccgccgctg
      241 ccgtggatca ggcggcgggc gccggcgccg atcacctcgt cgccgaagcg gaggacgccg
      301 ccggcgctgt gcacggccac ctgggcggag tgctgggtgt gacggtcgcg ccattcgacg
      361 tcgacgacac cgtcgaaggg ctgcgactcg gccgcctccc gggcccggtc gagcaactcg
      421 accgccgtgc tgtccgacgg ggccggggcg gcgtcgggcc gggtgatgcc acccaccgcc
      481 ggatcggcgc cgaggacggc gggcccggcg ccggccggaa gggcgggcac cagcccgccg
      541 agcaccgtgc cggccacgag gcagccgagg gcgaggcggc gggcgctggg gttcacggcc
      601 cgaagctgac ggggacggcg atcggagcca gctgcgagag cgggtcgccg gtgaccgagg
      661 cccgggcggc gtgggtgtcg gccagcgacg gcagcgacgg cgcgaccgag gggtcgcggg
      721 gcaggagcag ggcgatcgcc gctgccaccg ccgccgccag ggcccaggcg gcccggcggc
      781 gccgggcggc cgccggccgg cgggaagtca ggcctggcca cccttcgccg ggaccaccgg
      841 acggccccgg gacagccccg cccgggtcct cgccccacag cgcccgccgg gtggcgtgga
      901 cgggcatgat ccggatcgcc cgccgggccg ccgccacctc ctcgagctcg gcccggcagt
      961 cggaacagcc ggccaggtgg gtttcggcct cccgccgggc cgccggggcc agctcgtcgt
     1021 cgaggaaggc cgacagggcg tcgccgagat gctcgccggg cgggcccgtc ggcccggacg
     1081 ggatcactgc agcgcctccc gcaggagacg gcggccccgg tggatgcgcg accgcaccgt
     1141 gccgacgggc acggcgatgg cgtcggcaat ctcctcgtag ctcagcccga cgacgtcgca
     1201 gagcacgacg gcggtgcgga actcctcggg taggcggcgc agcgccgcct gcacctcgtc
     1261 ggacagggtg tcggtcggct cgtcggcgcc ggggctcgac ggcagcagcc gctcgggatc
     1321 ctcgggcagg acctcgaccg gccggcggcg cttgcggcgc acctcgtcga ggaagacgtt
     1381 ggtcacgatc cgggacaacc agccctccat cgaccccggc cggtaggtct cgagcccttt
     1441 gcggacccgc agcagcgcct cctgcacgag gtcgaacgca tcatcgtcgt tgccggtgag
     1501 ccgataggcc acgttgtaga gaaagcgccc gtaggtgcgg gcgacctcct cccaggtggg
     1561 gacctcaccg gtcacctgga ggaacgccgg cgcggcctct cgagttcccg gcggccctcc
     1621 gccgtctccc tcagccggcc ccggatccgt gccggatgcg ctcagctctt ggtgtcaggg
     1681 ctcttgctct cgggctcgtc ggccgagccg gtgccctcgg ccaggccctt cctgaattcc
     1741 ctcgacgact cacccagcga acgcgccagc ttcggcaact tggcgccgcc gaacagcagc
     1801 atcacgatga tcaggatgat gatgagctcc ggagccccga gtccagccac gggagtgtcc
     1861 tttcgatcaa acagctgcgg tcacaccagg acctggatgc cccctgatgc atttcatcca
     1921 ggttaccgcc ccccgacggc cccgccatgg cgaccgtggt gacgttcatg agcctagggc
     1981 gagcttgagc atttcgagat cgtcgaggcc gctgatcgaa aacggcagcg gcccggcaga
     2041 cacgatcaat tcggccacac cgagcgccgc ccagcccgcc acctgctcgg cgatctcctc
     2101 caccgtgccg acgaggcggc ccgttcgcca ctcatcgagg gcgacgccgt cgagcatccc
     2161 gccgggggcg ttcttccgca tgcgctcgta gcgggcggcc aggtcgcgct cgtcctcgcc
     2221 ggccagggcg tagaggccga cggtgcggcg gacggaggcc ggatcgcggc cggcgtcctc
     2281 acaggcccgg tcgaggacgg aggcgcgctg ccggtagtcc tccggcgtcc agacccagca
     2341 ggtgttccag ccgtcggcca tctcggccac gagccgcagg aggcggttgc ccttgccgcc
     2401 gacgaagatc ggcgggcggg gggcctggag ggccggcggg aggttcgtcg ctccccgcac
     2461 gatatgggcc ttgccgttga gcgaggccgg cccgccggga agcagggcgt cgagcaccgc
     2521 caacgcctcc cggagccggg ccaggcgctc ggccggcggc ggcaggctga gccccacggc
     2581 ctcgtagtcg ggggcgtacc acccggcccc gatgccgatg tccagccgac cccggcagag
     2641 ccggtcgagc gtggccagag ccttggccag gacgccggcc gggcgcaggg cctcggacag
     2701 gaccagcgtg cccagccggg ggccgctgac gaccccggcg agggcggcca gggtggtgag
     2761 cggctcgtag gcgaactgct cgcccggcgg gccgccgtag cgctcgatgg acaggctgac
     2821 gtggtcggag acccacagcg a
//
LOCUS       DATGJT010000103         5441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_532027, whole genome shotgun sequence.
ACCESSION   DATGJT010000103 DATGJT010000000
VERSION     DATGJT010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5441
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_532027"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..135
                     /locus_tag="VKX24_01780"
     CDS             <1..135
                     /locus_tag="VKX24_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018794694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter permease"
                     /protein_id="HLJ07239.1"
                     /translation="LHPVISPSTVVLSFGVSILIGVFFGLYPASRAAALTPMEALRYE
                     "
     gene            complement(152..697)
                     /locus_tag="VKX24_01785"
     CDS             complement(152..697)
                     /locus_tag="VKX24_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020299342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HLJ07240.1"
                     /translation="MQRSTSEDWAVIGKRFAEHGRGLADRVLDHLRLLDGDFGGFAVD
                     RLTHSLQTATRAFRGGEDEEYVVCSLLHDIGDTLGSYNHADIAAAVLRPFVSDENHWM
                     VEQHAVFQGYYFFHHLGMDRNLREQFRGHPCFERTALFCERYDAPAFDPAAETLPLDF
                     FEPMVRRLFAAPKQTLYTGMQ"
     gene            complement(745..1056)
                     /locus_tag="VKX24_01790"
     CDS             complement(745..1056)
                     /locus_tag="VKX24_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006419731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HLJ07241.1"
                     /translation="MIRVSVMYPRTEGGKFDMDYYVNKHMPMVADRCGAAMKGMTVAE
                     GIAGGQPGEPPTYTCVGVLAFDSVEAFQGAFGPHMAEIMGDIPNYTNISPVIQISEVR
                     M"
     gene            1232..2962
                     /locus_tag="VKX24_01795"
     CDS             1232..2962
                     /locus_tag="VKX24_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018778787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07242.1"
                     /translation="MLIRLLRTHLRPYRRLLLVLIGLQAVQAIASLYLPFLNADVIDK
                     GVMRGDTAYIWRLGGLMLVVTAVQLAFSIGAVYLAARVAMGFGRDIRDALFHRVTGFS
                     AREMNRLGAASLITRITNDVQQVQLLVVMACTFALAAPVTAVGGVILAVRQDGGLAWL
                     LAVALPVLVLSLWAVVSRMIPQFRVMQEKIDGINRVLREQITGIRVVRAFVREQEEVV
                     RFERANDELTDTGLRSGRLMAFMFPIVLLIINGSSVAVIWFGGNRIAAGHLTIGALIA
                     FLSYFVLILMSVMMATFVASMAPRAAVCADRIAEVLNTDSSVWAPAAPVEGLETLGSV
                     EFSGVTFRYPGAEAPVVSDVSFTTPAGTTTAIIGSTGAGKTTLVNLAARLYDVDEGGV
                     RLGGADVRTIAPEQLWSRIGLIPQKPYLFSGTVRSNLLYGKPDATDEELWAALQVAQA
                     ADFVAAMAGGLDAVIEQGGANVSGGQRQRLSIARALVRRPDVYLFDDSFSALDVATDA
                     RLRAALTPHTRKAAVIVVAQRVSTIRHADQIVVLENGSVVGIGTHDELMAGCPTYREI
                     VESQRQEEAA"
     gene            3046..4887
                     /locus_tag="VKX24_01800"
     CDS             3046..4887
                     /locus_tag="VKX24_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011693463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07243.1"
                     /translation="MPQQRIGSGAGRWGALGMPAEKSANFKQSLRRLGRMLGLERLGF
                     SAVIVLAVVSVSLSVVGPKLLGRATDVIFTGLLHGGPSAINFASLHRILLFVVGLYIG
                     AAVLGYVQSYVLTGIVQRTMYRLREDVETKLNRLPLRYVDGQARGDLLSRVTNDIDNL
                     AQSMQQTLSQMLTSTLTLVGTLLMMFLVSWVLALVALVTIPLSIWTMKMITRRSRSKF
                     MAQWRHTGDLNALVEETFTGHSIVKAFGRQADVEDRFRELNDSLYEASFGAQFISGSI
                     QPSMMVMGNLNFVAIAVVGGLRVASGALTLGAVQAFIQYTRQFSQPMTQMASMVTVFQ
                     SGVASAERIFDFLDAPEEDADTDERLLPATPAGCIEFESVSFSYWPDRPLIEHLSFVA
                     QPGQTVAIVGPTGAGKTTLVNLIMRFYPIDDGRILLDGIDTATLSRAELRSKIGMVLQ
                     DTWLFGGTIRDNIAYGNPGASEEDIHRAAEATFVDRFVRSLPDGYDTVVSDDEGSISA
                     GEKQLLTIARAFLADPAILILDEATSSVDTRTEVLIQEAMAALRSQRTSFVIAHRLST
                     IRDADVILVMEHGQIVEQGSHEELLAADGAYACLYHAQFAAPVADVA"
     gene            5085..>5441
                     /locus_tag="VKX24_01805"
     CDS             5085..>5441
                     /locus_tag="VKX24_01805"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015491143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygenase MpaB family protein"
                     /protein_id="HLJ07244.1"
                     /translation="MRTVAREGALLAGGARAILLQVAHPGVARGVAEHSDFATRPLDR
                     LRATLGYVYGVTFGTPEESRAVAAMVTEAHRAVAGAGYRASDPELQLWVAATLYDTAV
                     LIYERLLGPLDPAAADA"
BASE COUNT          760 a         1941 c         1873 g          867 t
ORIGIN      
        1 ctgcatccgg tgatctcgcc gtcgacggtg gtgctgtcgt tcggcgtgtc gatcctcatc
       61 ggggtcttct tcgggctcta cccggccagc cgggccgccg ccctcacccc gatggaagcc
      121 ctccgctacg agtagccgcg ctccgagggc gctactgcat ccccgtgtag agcgtctgct
      181 tcggggcggc gaacagccgg cggaccatcg gctcgaagaa gtcgaggggc agcgtctccg
      241 ccgccgggtc gaaggccggg gcgtcgtagc gctcgcagaa gagcgccgtc cgctcgaagc
      301 aggggtggcc ccggaactgc tcccggaggt tccgatccat cccgaggtgg tggaagaagt
      361 agtagccctg gaagacggcg tgctgctcga ccatccagtg gttctcgtcg gagacgaaag
      421 gcctgagcac ggcggcggcg atgtcggcgt ggttgtagga gccgagcgtg tcgccgatgt
      481 cgtggaggag gctgcagacg acgtactcct cgtcctcgcc gccccggaag gcccgggtgg
      541 cggtctggag ggagtgggtc agccggtcga cggcgaagcc gccgaagtcg ccgtcgagga
      601 gccgcaggtg gtcgaggacc cggtcggcca ggccccggcc gtgctccgcg aagcgcttcc
      661 cgatgacggc ccagtcctcg gacgtcgacc gctgcatgtc ggtgaacgtc gcctgcagcc
      721 cgttcgtctc cacggaagac tccgctacat ccggacttcg ctgatctgga tgaccggcga
      781 gatgttggtg tagttcggga tgtcacccat gatctcggcc atgtgggggc cgaaggcgcc
      841 ctggaaggcc tctaccgagt cgaaggccag cacgccgacg caggtgtagg tgggcggctc
      901 gcccggctgg cccccggcga tcccctcggc gaccgtcatc cccttcatgg ccgcgccgca
      961 gcggtcggcc accatgggca tgtgcttgtt gacgtagtag tccatgtcga acttgccgcc
     1021 ctcggtcctc ggatacatca cgctgacgcg gatcatgggc cactcctctt cccggtcggt
     1081 cgtcggttcg gtccggacgc tatcccctgg ccctgaccgg caccacccgt ccgaaaaagc
     1141 cgctttattt cggtggccga cgtgccgaga atcaccctaa acttggcact gagtgcaacg
     1201 aggcactggc gacagcgatg aggaggtaaa agtgctgatc aggctgctgc ggacgcacct
     1261 gcgcccctac cggcgcctcc tcctcgtgct gatcgggctg caggccgtcc aggcgatcgc
     1321 ctccctctac ctcccgttcc tcaacgccga cgtcatcgac aagggcgtga tgcggggcga
     1381 caccgcctac atctggcgcc tcggcgggct gatgctggtg gtcaccgccg tccagctggc
     1441 cttctccatc ggggccgtct acctcgccgc ccgggtggcc atgggcttcg ggcgcgacat
     1501 ccgtgacgcc ctcttccacc gggtcaccgg cttctcggcc cgggagatga accgcctcgg
     1561 ggcggcgtcg ctcatcaccc gcatcacgaa cgacgtccag caggtccagc tgctggtggt
     1621 catggcctgc accttcgccc tggccgcgcc cgtcacggcc gtcgggggcg tcatcctggc
     1681 cgtccgccag gacggcggcc tggcctggct gctggccgtg gccctgcccg tcctcgtgct
     1741 ctccctgtgg gccgtcgtct cccgcatgat cccccagttc cgggtgatgc aggagaagat
     1801 cgacggcatc aaccgggtgc tgcgggagca gatcaccggc atccgggtcg tgcgggcctt
     1861 cgtgcgggag caggaggagg tcgtccgctt cgagcgggcc aacgacgagc tcaccgacac
     1921 cgggctgcgg tcggggcggc tgatggcctt catgttcccg atcgtgctgc tgatcatcaa
     1981 cggctcgagc gtggccgtca tctggttcgg cgggaaccgc atcgccgccg gccacctgac
     2041 gatcggggcg ctgatcgcct tcctcagcta cttcgtgctg atcctgatgt cggtcatgat
     2101 ggccaccttc gtggcgtcga tggcgccccg ggcggcggtc tgcgccgacc ggatcgccga
     2161 ggtcctcaac accgacagct cggtgtgggc gccggccgcc ccggtcgagg gcctcgagac
     2221 gctggggtcg gtggagttca gcggggtgac gttccgctac cccggggccg aggcgccggt
     2281 ggtgtcggac gtgtcgttca ccacgccggc cggcacgacc acggccatca tcggctcgac
     2341 cggcgccggc aagacgacgc tggtcaacct ggccgcccgc ctctacgacg tcgacgaggg
     2401 aggggtgcgg ctcggcggcg ccgacgtccg cacgatcgcc cccgagcagc tgtggagccg
     2461 gatcgggctc atcccccaga agccctacct gttctcgggg accgtgcggt ccaacctgct
     2521 ctacggcaag cccgacgcca ccgacgagga gctgtgggcg gcgctccagg tcgcccaggc
     2581 ggcggacttc gtcgccgcca tggccggcgg gctcgacgcc gtcatcgagc agggcggcgc
     2641 caacgtgagc ggcgggcagc gccagcggct gtcgatcgcc cgggcgctgg tccgccggcc
     2701 cgacgtgtac ctcttcgacg actcgttctc ggccctcgac gtggccaccg acgcccggct
     2761 gcgggcggcg ctcacgcccc acacccggaa ggcggcggtg atcgtggtgg cccagcgggt
     2821 gtcgacgatc cgtcacgccg accagatcgt ggtgctggag aacgggtcgg tggtcgggat
     2881 cggcacccac gacgagctca tggccggctg cccgacgtac cgggagatcg tggaatcgca
     2941 acggcaggag gaggcggcgt gagcgcccgg atcgacaaca ccgccgacga ggcggacacc
     3001 acgccgccgc cgcccgcccc ggagcccgcc gccaagccgg ggcccctgcc ccagcagcgg
     3061 atcggatccg gcgccggacg gtggggtgcg ctcggcatgc cggccgagaa gtcggccaat
     3121 ttcaagcagt cgctgcgccg cctgggccgc atgctcggcc tggaacggct cggtttctcg
     3181 gccgtcatcg tgctggccgt ggtcagcgtc agcctctcgg tcgtcggacc gaagctcctc
     3241 ggccgggcga ccgacgtcat cttcaccggc cttctgcacg gcggcccgtc cgccatcaac
     3301 ttcgcttcgc tgcaccggat cctgctcttc gtggtgggcc tgtacatcgg cgccgccgtc
     3361 ctcggctacg tgcagtccta cgtcctcacg gggatcgtgc agcggacgat gtaccggctg
     3421 cgggaggacg tcgagaccaa gctcaaccgc ctgccgctgc gctacgtcga cggccaggcc
     3481 cggggcgatc tgctctcccg ggtgaccaac gacatcgaca acctggccca gagcatgcag
     3541 cagacgctgt cgcagatgct gacgtcgacc ctcacactgg tcggcacgct gctgatgatg
     3601 ttcctcgtgt cgtgggtcct ggcgctggtg gccctggtga cgatcccgct gtcgatctgg
     3661 acgatgaaga tgatcaccag gcggtcgcgg tcgaagttca tggcccagtg gcgccacacc
     3721 ggcgacctca acgccctcgt cgaggagacc ttcaccggcc actccatcgt caaggccttc
     3781 ggccgccagg ccgacgtcga ggaccgcttc cgggagttga acgactcgct ctacgaggcg
     3841 agcttcggcg cccagttcat ctcggggtcg atccagccct cgatgatggt catgggcaac
     3901 ctcaacttcg tggccatcgc cgtggtcggc gggctgcggg tggcctcggg ggcgctgacg
     3961 ctgggcgcgg tgcaggcctt catccagtac acccgccagt tctcccagcc catgacccag
     4021 atggcctcga tggtgacggt gttccagtcg ggggtggcct cggcggagcg gatcttcgac
     4081 ttcctcgacg ccccggagga ggacgccgac accgacgagc gcctcctgcc cgccacgccg
     4141 gccgggtgca tcgagttcga gagcgtctcg ttctcctact ggccggaccg gccgctgatc
     4201 gagcacctgt cgttcgtggc ccagccgggg cagacggtgg ccatcgtcgg cccgaccggc
     4261 gccggcaaga cgacgctggt caacctcatc atgcgcttct atccgatcga cgacgggcgg
     4321 atcctcctcg acgggatcga caccgccacg ctgtcccggg ccgagctgcg ctccaagatc
     4381 ggcatggtgc tgcaggacac gtggctcttc ggcggcacga tccgcgacaa catcgcctac
     4441 ggcaatcccg gggcgtcgga ggaggacatc caccgggcgg ccgaggcgac gttcgtcgac
     4501 cggttcgtgc ggtcgctgcc cgacggctac gacacggtgg tgagcgacga cgagggctcg
     4561 atctcggccg gcgagaagca gctgctgacg atcgcccggg ccttcctggc cgaccccgcc
     4621 atcctcatcc tcgacgaggc caccagctcg gtcgacaccc gcaccgaggt cctcatccag
     4681 gaggccatgg cagcgctgcg ttcccagcgg acgagcttcg tgatcgccca ccgcctctcg
     4741 accatccgcg acgccgacgt gatcctcgtc atggagcacg gccagatcgt cgagcagggc
     4801 agccacgagg agctcctggc cgccgacggc gcctacgcct gcctctacca cgcccagttc
     4861 gccgctcccg tcgccgacgt cgcttagcag gtcccggcgc aatcccgacc ggcatcggca
     4921 gctctcttcc ctccccatcc cccgaaccgg cgttcctcag gaacacccgt cgttcctcaa
     4981 gaacgccgct ttcccccggg cgggcggtgg cgacttcacc gccgccggct tcgtcgaggt
     5041 cggggcaccg gcctagggtc ggggtcgtgg gcgggaacgc cgagatgcgg acggtggccc
     5101 gggagggggc gttgctggcc ggcggggccc gggccatcct gctccaggtg gcccatcccg
     5161 gcgtggcccg gggcgtggcc gagcacagcg acttcgccac ccggccgctc gaccggctgc
     5221 gggcgacgct cggctacgtc tacggcgtga cgttcggcac accggaggag agccgggcgg
     5281 tggcggccat ggtcaccgag gcccaccggg cggtggccgg ggcgggctac cgggcctccg
     5341 acccggagct gcagctctgg gtggcggcga cgctctacga caccgccgtc ctcatctacg
     5401 agcggctgtt ggggccgctc gacccggcgg cggccgacgc c
//
LOCUS       DATGJT010000104         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_427002, whole genome shotgun sequence.
ACCESSION   DATGJT010000104 DATGJT010000000
VERSION     DATGJT010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427002"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1141)
                     /locus_tag="VKX24_01810"
     CDS             complement(<1..1141)
                     /locus_tag="VKX24_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012256085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLJ07245.1"
                     /translation="MNGILSGMRVIEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLD
                     ARRWPITADGKSLFWAGMNKGKRSVAVDLRSPRGRELLTDLITADGAEAGLFLTNFPA
                     AGWLDYAGLAARRADLVMVNIVGNHDGSSAVDYTVNPATGFPWATGPTNLGVPFNHLL
                     PAWDAITGTLAAAGLLAAERHRRLTGTGQLVRLALSDVAFAMVGHLGKIAEVQVNQSE
                     RPKYGNYLYGAFGRDFATKEGKRIMVVGLTPRQWKNLVDATGIHDACAQIEKLLGVDL
                     SDEGDRFAAREVIGAVLKPWIIGRTLAEVAEIFDAHDVCWGPYQTFGELVEHDPRCSV
                     ENPMFELVEQPGIGSYLMPGSPLAFEGCDRVPPRPAPRLGEHTDEV"
     gene            complement(1153..>2042)
                     /locus_tag="VKX24_01815"
     CDS             complement(1153..>2042)
                     /locus_tag="VKX24_01815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl dehydratase"
                     /protein_id="HLJ07246.1"
                     /translation="LRLPLDHELSRWVTGRARPLAHPTLVCHVAIGQTTAASQRVKGN
                     LFYRRLQVLRPVHIGDTLSTRAEVVALRQNRPKPGRPATGMVALRIVTENQRGKPVLD
                     FWRCPMIPLRHPDGETGHADSFDDIPADIDLDRLGAKAPWGWRLPVFKDRVGRGGAHF
                     GDVAAGTTYVVEGRDTVTAAPELVRATLNLAAVHTDPAAGPDGRRLVYGGHTISLAGA
                     AATRALPNLVTILAWRSCDHTGPVFEGDVLRTEVSVDALHPLTQGGMVDLHAVVWADH
                     ADGRPEQPVLDWRFVALMA"
BASE COUNT          267 a          692 c          802 g          281 t
ORIGIN      
        1 ggacctcgtc ggtgtgctcg ccgagccggg gggccggccg gggcgggacg cgatcgcagc
       61 cttcgaaggc cagcggcgac cccggcatga ggtacgagcc gatgccgggc tgttcgacca
      121 gctcgaacat cgggttctcg accgagcacc gggggtcgtg ctcgacgagc tcgccgaacg
      181 tctggtacgg gccccagcac acgtcgtggg cgtcgaagat ctccgccacc tcggccagcg
      241 tgcggccgat gatccacggc ttgaggacgg cgccgatgac ctcccgggcg gcgaagcggt
      301 ccccctcgtc ggacaggtcg acgccgagca gcttctcgat ctgggcgcag gcgtcatgga
      361 tgccggtggc gtcgacgagg ttcttccact gccggggggt cagccccacg accatgatcc
      421 gtttgccttc cttcgtggcg aagtcccgcc cgaaggcgcc gtagaggtag ttgccgtact
      481 tcggccgttc gctctggttg acctggacct cggcgatctt gcccaggtgg ccgaccatgg
      541 cgaaggccac gtcggacagc gccagccgca ccagctgccc ggtgccggtg aggcggcggt
      601 gccgctcggc ggcgaggagg ccggcggcgg ccagcgtccc ggtgatggcg tcccacgccg
      661 gcaggagatg gttgaagggc acgccgaggt tggtggggcc ggtggcccag gggaagccgg
      721 tggcggggtt gaccgtgtag tcgacggcgc tcgacccgtc gtggttgccg acgatgttga
      781 ccatgacgag gtcggcccgg cgggcggcga gcccggcgta gtcgagccag ccggcggccg
      841 ggaagttggt gaggaacagc ccggcctcgg cgccgtcggc cgtgatgagg tcggtgagga
      901 gctcccggcc ccgcggggag cgcaggtcga cggccaccga ccgcttgccc ttgttcatgc
      961 ccgcccagaa gaggctcttc ccgtcggcgg tgatgggcca gcggcgggcg tcgaggccgc
     1021 cgccgatggg gtcgaagcgg atgacgtcgg cgccgagctg ggccagcgtc atgcccccga
     1081 ggggggcggc gacgaacgcc gaaccctcga tcacccgcat cccggagaga atcccgttca
     1141 ctggttgcct cctcaggcca tcagggcgac gaagcgccag tcgaggacgg gctgttccgg
     1201 ccggccgtcg gcgtgatcgg cccacaccac ggcgtggagg tcgaccatcc cgccctgggt
     1261 cagcgggtgg agggcgtcga cgctcacctc ggtgcggagc acgtcgccct cgaagaccgg
     1321 cccggtgtgg tcgcagctcc gccaggcgag gatcgtgacc aggttcggca gggcccgggt
     1381 ggcggccgcc ccggccagcg agatcgtgtg gccgccgtag accaggcggc gcccgtcggg
     1441 gccggcggcc gggtcggtgt ggacggcggc caggttcagc gtggcccgga cgagttcggg
     1501 ggcggcggtc accgtgtcgc ggccttcgac cacgtatgtc gtgccggcgg cgacgtcccc
     1561 gaagtgggcg ccgccccggc cgacccggtc cttgaacacc ggcagccgcc agccccaggg
     1621 cgccttggcc cccaggcggt cgaggtcgat gtcggccggg atgtcgtcga aggagtcggc
     1681 gtggccggtc tcgccgtcgg ggtggcgcag cgggatcatc gggcagcgcc agaagtcgag
     1741 gacgggcttg ccccgctggt tctcggtcac gatgcgcagc gccaccatcc cggtggccgg
     1801 acgcccgggc ttcggccggt tctggcgcag cgccaccacc tcggcccggg tcgacagcgt
     1861 gtcgccgatg tggacgggcc gcagcacctg gagccggcgg tagaacaggt tgcccttcac
     1921 ccgctgggag gcggcggtcg tctggccgat ggccacgtgg cacacgagcg tggggtgggc
     1981 cagcggccgg gcccggccgg tgacccaacg ggacagctcg tggtccaggg gcagccgcag
     2041 cc
//
LOCUS       DATGJT010000105         2496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_532262, whole genome shotgun sequence.
ACCESSION   DATGJT010000105 DATGJT010000000
VERSION     DATGJT010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_532262"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..581
                     /locus_tag="VKX24_01820"
     CDS             <1..581
                     /locus_tag="VKX24_01820"
                     /inference="COORDINATES: protein motif:HMM:NF013626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HLJ07247.1"
                     /translation="TGDPRLVAEASLIEEVAEIDQQLERRAGGPGSPLASGGMASKLA
                     AAKMATWSGVETVIAEAARPGVLHSVLAGEPGAGTVFRARPRSLPARKLWIAFALDSA
                     GTVVVDDGARRALTEGGRSLLAAGVVSVTGAFEPDDAVEVRDATGAVVAKGLVRCPSS
                     RAAEWVRRRSGELPDDLAPEVIHRDDMVVLGD"
     gene            632..1450
                     /locus_tag="VKX24_01825"
     CDS             632..1450
                     /locus_tag="VKX24_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010460515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ07248.1"
                     /translation="MLERDWALTDADGIRVHGTRWAPESPRAVVQIAHGWAEHRRRYA
                     RLAGALVGAGYAVWADDHLGHGQTGAGGGGLGDLGPRGMEGVTAAVALVTARVRAEEP
                     GLPVVLLGHSWGSFLSQRLVRDHGADYAGLVLSGTTRREPGSARPARPSFAGGRYDWL
                     SRDAAEVAAYEADPWCGFENLTVRPEDPGRAYLEAGSDADVPSSLPVLILNGSDDPVG
                     GEEGGARLADAYRAAGVSDVTLIAYPGARHEVFNETNRDEVTADLLRWLGARVP"
     gene            1547..>2496
                     /locus_tag="VKX24_01830"
     CDS             1547..>2496
                     /locus_tag="VKX24_01830"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: protein motif:HMM:NF001221.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HLJ07249.1"
                     /translation="MAAELASLGVRARAAVKSISTASSAARDQALLVAADLLLAGAER
                     LLEANRADVAKAEADGLAPGALDRLALDPARIDQMAEGLRQVASLPDVLGEVLEGRVR
                     PNGLRVERVRVPLGVVGIIYENRPNVTSDAAALCVKSGNVAFLRGSSSALESNRAVVA
                     VLREALSKTGLSEDGVLLVEDTSHATAVAFMRLRGVIDCLIPRGGRGLIDLLLEEATV
                     PYVLDGDGNCHVYVDGAADLSMALDVALNAKTHRFGVCNAAETVLVDAAVADEFVPRL
                     ADAMAAAGVEIRGDAAVQALVPAAVAAEESDWATEYLGPTL"
BASE COUNT          290 a          910 c          979 g          317 t
ORIGIN      
        1 tcaccggtga cccccggctc gtcgccgagg cctccctcat cgaggaggtg gccgagatcg
       61 accagcagct cgagcgccgg gccggcggcc cggggagccc cctggccagc gggggcatgg
      121 cctccaagct ggccgcggcg aagatggcga cctggtccgg ggtggagacg gtcatcgccg
      181 aggccgcccg gccgggcgtg ctgcacagcg tcctcgccgg cgagccgggg gcgggcaccg
      241 tgttccgggc ccgcccgcgt tcgttgccgg cccgcaagct gtggatcgcc ttcgccctcg
      301 actcggccgg caccgtggtc gtcgacgacg gggcccgcag ggccctgacc gagggcgggc
      361 ggtcgctgct cgccgcgggc gtggtctcgg tgaccggggc cttcgagccc gacgacgccg
      421 tcgaggtgcg cgacgccacc ggcgcggtcg tggccaaggg gctggtgcgc tgcccgtcgt
      481 cgcgggcggc cgagtgggtc cgccgccgct cgggcgagct gcccgacgac ctcgcccccg
      541 aggtcatcca ccgcgacgac atggtcgtcc tcggcgactg aaggcggcgc cgagcgggcc
      601 cgggtggcgg cgggcgtggt aggcaggcga ggtgctggag cgtgactggg ccctgaccga
      661 cgccgacggg atccgcgtcc acgggacccg gtgggcgccg gagtcgccga gggcggtcgt
      721 gcagatcgcc cacggctggg ccgagcaccg ccggcgctac gcccgcctcg ccggcgccct
      781 cgtcggggcc ggttacgccg tgtgggccga cgaccacctc ggccacggcc agaccggggc
      841 cgggggcggg ggactcggcg acctcgggcc ccgcggcatg gagggggtga cggcggcggt
      901 ggcgctcgtg accgcccggg tccgggcgga ggagcccggg ctcccggtcg tgctcctcgg
      961 ccactcctgg ggctcgttcc tgtcccagcg gctcgtccgg gaccacggcg ccgactacgc
     1021 gggcctcgtc ctctccggga cgacgcgccg ggaaccgggg tcggcccgcc ccgcccgacc
     1081 ctcgttcgcc gggggccgct acgactggct gagccgcgac gccgccgagg tggcggcgta
     1141 cgaggcggac ccctggtgcg gcttcgagaa cctgaccgtc cggccggagg acccgggccg
     1201 ggcctacctc gaggcgggca gcgatgccga cgtcccgtcc tcgctgccgg tcctcatcct
     1261 gaacgggagc gacgacccgg tcggcggcga ggagggggga gctcggctcg ccgacgccta
     1321 ccgggcggcc ggcgtgagcg acgtgaccct gatcgcctat ccgggcgccc ggcacgaggt
     1381 cttcaacgag accaaccgcg acgaggtcac ggccgatctc ctcaggtggt tgggggcgcg
     1441 ggtgccctga gggggcatcg ggaccggccc cgaaccaccc cgatcgcccc tggggagcgc
     1501 cgcaccccca cgaggggccg gcgcagcgtc gaactatgat cgtccgatgg ccgccgagct
     1561 cgcgagcttg ggagtccgag cccgggccgc cgtgaaatcg atctccacgg cgtcctccgc
     1621 cgcgcgcgac caggcgctcc tcgtggccgc cgacctcttg ctcgccggcg ccgaacggct
     1681 gctcgaggcc aaccgcgccg acgtggccaa ggcggaggcc gacgggctcg ccccgggcgc
     1741 cctcgaccgc ctggccctcg atccggcccg gatcgaccag atggcggagg ggctgcgcca
     1801 ggtggcgagc ctccccgacg tgctgggcga ggtgctggag ggccgggtgc ggccgaacgg
     1861 gctccgggtc gagcgggtcc gggtgcccct cggcgtggtc gggatcatct acgagaaccg
     1921 gcccaacgtg acgagcgacg ccgccgcgct gtgcgtgaag tcgggcaacg tcgccttcct
     1981 gcggggatcc tcctcggcgc tcgagtcgaa ccgcgccgtg gtggcggtcc tgcgcgaggc
     2041 gctgtccaag accgggctgt ccgaggacgg ggtcctcctg gtcgaggaca cgagccatgc
     2101 gaccgcggtc gcgttcatgc ggctccgggg cgtcatcgac tgcctcatcc cccgcggcgg
     2161 gcgcggcctc atcgacctcc tgctcgagga ggcgaccgtc ccctacgtgc tcgacggcga
     2221 cgggaactgc cacgtctacg tcgacggggc cgccgacttg tcgatggcgc tcgacgtggc
     2281 gctgaacgcc aagacgcacc gttttggcgt gtgcaacgcg gccgagacgg tcttggttga
     2341 cgcagccgtg gccgacgagt tcgtgccgcg gctggccgat gccatggccg cggcgggtgt
     2401 cgagatccgc ggcgatgctg ccgtgcaggc cttggtgccg gccgcagtgg cggcagagga
     2461 gagcgattgg gccaccgagt atctcgggcc gacgct
//
LOCUS       DATGJT010000106         2820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_427221, whole genome shotgun sequence.
ACCESSION   DATGJT010000106 DATGJT010000000
VERSION     DATGJT010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427221"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..787)
                     /locus_tag="VKX24_01835"
     CDS             complement(<1..787)
                     /locus_tag="VKX24_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018734025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HLJ07250.1"
                     /translation="MTPGRTGAGGPRRAGPRPGARRAAAAPGVAVRALALEALGRVDS
                     GGYSNLVLPALLRDSGLDGRDRALATDLVYGTLRRQGQADFLLERVSHRALPELDPPV
                     RTALRLGAYQLLAGVAAHAAVGATVGALGAPPSPPTARRAAPFVNAVLRRVADLGPDW
                     PWPAGDAADAVAVRTSHPRWIVELLRRDLGADAEAVLAAANEPPAVTLRPNPLRTTVE
                     DLAAELAAGGVDVEPGRLVPTALLVRGAGDLARLPAVGDGRATP"
     gene            complement(784..1686)
                     /gene="fmt"
                     /locus_tag="VKX24_01840"
     CDS             complement(784..1686)
                     /gene="fmt"
                     /locus_tag="VKX24_01840"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007255336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HLJ07251.1"
                     /translation="MRIVFLGSPPEAQGALRALHDAGHDVALVVTQPDRRRGRGGDLV
                     PSPVKKTATELGMKVVTPERCKEALDDIAGSGAELGVVVAFGQLIPPSVLAALPSGYV
                     NVHFSLLPRWRGAAPVERAILAGDAETGVCLMQLEAGLDTGPVYVCRTIPITPDDTAG
                     ALRARLADLGTELLVAELESIPGREPTPQEGEETYAAKLTVEEFAVDWSRPAAELARL
                     VMAGNPKPGAWTTARGARLKLLRARADEAPAPDGAEPGALVGPGRVATGAGVLVLGEV
                     QPEGKAAMPAAAWAGGFRGERLGA"
     gene            complement(1700..2254)
                     /gene="def"
                     /locus_tag="VKX24_01845"
     CDS             complement(1700..2254)
                     /gene="def"
                     /locus_tag="VKX24_01845"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011564447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HLJ07252.1"
                     /translation="MATFPIRVFGDLGLKQRCPDVTEFDGSLARLADDMIETMYAAPG
                     VGLAANQVGVQKRIFVYDAGEGPFTVVNPTIVETSETWEYEEGCLSVPGLYFPIVRPR
                     CVTLSGYDLNGKEFVREGQDLLGRIFLHETDHLDGYLLLDRLDAGLRREAMKILRSGG
                     TGGQVRRLGVREDGGDGGPPPRPE"
     gene            complement(2289..>2820)
                     /locus_tag="VKX24_01850"
     CDS             complement(2289..>2820)
                     /locus_tag="VKX24_01850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07253.1"
                     /translation="LIGTEAVLHRVAPHPAGTTAVVVFLDFDAELLAPRFRAGEQALW
                     LLVRAARLVGPRAAGGRVLVQTRLPRHEVIEAAVRADPGVLADAERPRRKLLDLPPYA
                     ALARLTGDPPALAAAAGALRAAGGGDGLSVSAGAGGDVLVRAASAEALAGALAGALAA
                     GRPAGRLRAEVDPLRV"
BASE COUNT          340 a         1059 c         1135 g          286 t
ORIGIN      
        1 gcggcgtggc ccgcccgtcg ccgacggcgg gaagccgggc caggtcgccg gcgccccgga
       61 cgagaagggc ggtcgggacg aggcggccgg gctcgacgtc gacaccgccg gcggccagtt
      121 cggcggccag gtcctcaacc gtggtccgga gggggttggg ccggagcgtc acggctgggg
      181 gctcgttggc cgcggcgagg acggcctcgg cgtcggcgcc cagatcgcga cggagcagtt
      241 ccacgatcca gcgggggtgg gaggtgcgga cggccacggc gtcggcggcg tcgccggcgg
      301 gccagggcca gtcgggcccg aggtcggcga cccggcggag gacggcgttg acgaacggcg
      361 ccgcccgccg ggcggtcggc ggcgacggcg gagcgccgag ggcgccgacc gtggcgccga
      421 cggcggcgtg agccgccacc ccggccagga gctggtacgc cccgagccgg agcgccgtcc
      481 gcaccggcgg atcgagctcc ggcagcgccc ggtgcgacac ccgctccagg aggaagtcgg
      541 cctggccctg acggcggagc gtcccgtaga cgaggtcggt ggccagcgcc cggtctcgcc
      601 cgtcgaggcc ggagtcccgc aggagggcgg ggaggacgag gttggagtat ccgccggagt
      661 ccacccgccc cagcgcctcg agggccagcg cccggacggc gacgccgggg gcggccgccg
      721 cccgccgggc gccggggcgg ggcccggccc ggcgagggcc gcccgcgccc gtccgccccg
      781 gagtcaagcg ccgaggcgct cgccgcggaa gccgcccgcc caggccgcgg cgggcatggc
      841 cgccttgccc tccggctgca cctcgcccag cacgaggacg ccggcgcccg tggccacccg
      901 gccggggccg accagcgcgc ccggctcggc gccgtccggg gccggggcct cgtcggcccg
      961 ggcccgcagg agcttgaggc gggcgccccg ggccgtcgtc cacgcccccg gtttcgggtt
     1021 gccggccatc accagccggg ccagctcggc agccgggcgg gaccagtcga cggcgaactc
     1081 ctcgacggtc agcttggcgg cgtaggtctc ttcaccctcc tggggtgtcg gctcccggcc
     1141 ggggatcgac tcgagctcgg ccaccaggag ctccgtgccg aggtcggcca gccgggcccg
     1201 gagggcgccg gcggtgtcgt cgggcgtgat cgggatcgtc cggcagacgt agaccgggcc
     1261 ggtgtcgagg ccggcctcga gctgcatgag gcagacgccg gtctcggcat cgccggccag
     1321 tatggcccgc tccaccggcg ccgccccccg ccaccggggc agcagcgaga agtggacgtt
     1381 gacgtacccc gacggcagcg cggcgagcac cgacggcggg atcagctgcc cgaaggcgac
     1441 gacgaccccg agctcggcgc cgctgccggc gatgtcgtcg agcgcctcct tgcagcgttc
     1501 cggggtgacg accttcatgc cgagctcggt ggccgtcttc ttcaccgggc tcggcacgag
     1561 gtcgccgccc cggccgcgcc ggcggtcggg ctgcgtcacg acgagggcga cgtcgtggcc
     1621 ggcgtcgtgc agcgctcgca gggccccctg cgcttcgggc gggctgccga ggaagacgat
     1681 ccgcacagga ccgggaaccc tactccgggc ggggcggcgg gccgccgtcg ccgccgtcct
     1741 ccctgacgcc cagccggcgg acctgcccgc ccgtgccgcc cgagcggagg atcttcatcg
     1801 cctcccggcg caggccggcg tcgagccggt cgagcaggag gtagccgtcg agatgatcgg
     1861 tctcgtggag aaagatccgg ccgagcaggt cctgcccctc ccgcacgaac tccttcccgt
     1921 tgaggtcgta gccggagagc gtcacgcagc ggggccgcac gatcgggaag tacaggcccg
     1981 gcaccgagag gcagccctcc tcgtactccc acgtctccga cgtctcgacg atcgtcgggt
     2041 tcaccacggt gaagggcccc tcgccggcgt cgtagacgaa gatccgcttc tgcacgccga
     2101 cctggttggc ggccagcccc acgccgggcg cggcgtacat cgtctcgatc atgtcgtcgg
     2161 ccagccgggc cagcgacccg tcgaactccg tgacgtccgg gcagcgctgc ttcagcccga
     2221 ggtcgccgaa gacgcggatg gggaaggtgg ccatggcggg agactatcgg ccggcctggt
     2281 cggtgtactc agacccggag cgggtccacc tcggcccgca ggcgcccggc cggacggccg
     2341 gcggccaggg cgccggccag ggcgccggcc agggcctcgg ccgacgccgc ccggacgagg
     2401 acgtcgccgc cggcccccgc cgacaccgac agcccgtcac cgccgccggc cgcccgcagc
     2461 gcgccggcgg cggcggccag ggccggcgga tcgccggtga ggcgggccag cgcggcgtag
     2521 ggcgggaggt cgaggagctt gcggcgcggc cgttcggcgt cggccagcac gccggggtcg
     2581 gcccgcacgg cggcctcgat cacctcgtgg cggggcaggc gggtctgcac gaggacgcgg
     2641 ccgccggccg cccgggggcc gacgaggcgg gcggcccgga ccagcagcca cagcgcctgc
     2701 tcgccggccc ggaaccgggg ggccagcagc tcggcgtcga agtcgaggaa gacgaccacg
     2761 gcggtcgtcc cggccgggtg gggagcgacc cggtggagga cggcctcggt gccgatgagg
//
LOCUS       DATGJT010000107         2874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_739755, whole genome shotgun sequence.
ACCESSION   DATGJT010000107 DATGJT010000000
VERSION     DATGJT010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_739755"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /gene="rplV"
                     /locus_tag="VKX24_01855"
     CDS             complement(<1..697)
                     /gene="rplV"
                     /locus_tag="VKX24_01855"
                     /inference="COORDINATES: protein motif:HMM:TIGR01044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HLJ07254.1"
                     /translation="MADTATKETPQTRATLKYLRTSAYKVREVLDLIRGLDVDDARHV
                     LQFSERGPAREVLKVLNSAVANADNLLNIPADELKVAVAYADEGPTIKRWRPRARGRA
                     TRIRKRTCHITIIVARLSDAELQARRRRDSAAGTQRRRGVLPRRRRAAEPKAEKGKAA
                     APAAEEQLPEGPSGADVEPEAVAEAPAEAEAEVEEPTSEVEEPTTAVEEPAAEEPAAE
                     EPAAEVEAPAEDEE"
     gene            complement(710..988)
                     /gene="rpsS"
                     /locus_tag="VKX24_01860"
     CDS             complement(710..988)
                     /gene="rpsS"
                     /locus_tag="VKX24_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013130826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HLJ07255.1"
                     /translation="MPRSLKKGPFIDDHLRVKVERLNQTGEKRVVKTWSRRSTIIPDM
                     VGHTIAVHDGRKHVPVYVTEAMVGHKLGEFAPTRTFRYHAGQERSSRR"
     gene            complement(991..1827)
                     /gene="rplB"
                     /locus_tag="VKX24_01865"
     CDS             complement(991..1827)
                     /gene="rplB"
                     /locus_tag="VKX24_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014913424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HLJ07256.1"
                     /translation="MPLRKRKPTSPGRRFQSVSDFAEITTDRPEKSLLRAKPSTGGRN
                     VHGRLTARNVGGGHKQKYRVIDFRREKDGIPAKVASVEYDPNRNARIALLHYADGEKR
                     YILAPARIAVGDVLMSGQGAEIRPGNALPMRYIPVGTVIHNVELKPGAGGKIARGAGM
                     SIQLVAKEGDFATLRLPSTEMRRVPIDCRATVGSVGNAEAELVSLGKAGRARWKGRRP
                     HTRGVAMNPVDHPLGGGEGKSSGGRHPTSPWGKKEGRTRSKNKASDQMIIRRRRARGA
                     RR"
     gene            complement(1833..2126)
                     /gene="rplW"
                     /locus_tag="VKX24_01870"
     CDS             complement(1833..2126)
                     /gene="rplW"
                     /locus_tag="VKX24_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019980875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HLJ07257.1"
                     /translation="MSKDPRDIIIRPVVSEKSYALLDRNVYTFVVAPNANKIEIRQAV
                     QEIFNVTVTNVTTMNRRGKRKRNRRTNTFGQRATTKRAVVTVAGDGRIDIFGS"
     gene            complement(2123..2737)
                     /gene="rplD"
                     /locus_tag="VKX24_01875"
     CDS             complement(2123..2737)
                     /gene="rplD"
                     /locus_tag="VKX24_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016455370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HLJ07258.1"
                     /translation="MAEVLANAPLPEGIFGIQPNVPVMHQVVTAQLAAARSGTHSTKS
                     RAEVSGGGAKPWRQKGTGRARQGSSRAPHWRGGGVAHGPQPRSYRQRTPKKMVWLALR
                     SALSDRAAAGMVTVVDDWGFAAPRTKDAIAALDSVGVAAGERVLVVLGRDDEVAWKSF
                     RNLGDRVDLVTAEELNTYDVLVADRVIFTSATLAALSARGGGQS"
     gene            complement(2737..>2874)
                     /gene="rplC"
                     /locus_tag="VKX24_01880"
     CDS             complement(2737..>2874)
                     /gene="rplC"
                     /locus_tag="VKX24_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018682833.1"
                     /note="binds directly near the 3' end of the 23S rRNA,
                     where it nucleates assembly of the 50S subunit; essential
                     for peptidyltransferase activity; mutations in this gene
                     confer resistance to tiamulin; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HLJ07259.1"
                     /translation="VRTTTLNLEVVEGDAERGLLLIKGAVPGPAGGLVFVRNAVKGAA
                     G"
BASE COUNT          325 a         1015 c         1057 g          477 t
ORIGIN      
        1 cttcctcgtc ctctgcgggg gcctcgacct cggcggccgg ctcttcggca gcgggctctt
       61 cggcagcggg ctcttcaacc gcggtggtcg gctcctcgac ctcgctggtc ggctcctcga
      121 cctcggcttc cgcctcggcc ggggcctcgg cgaccgcctc gggctcgacg tcggcgccgg
      181 acggcccttc cggaagctgc tcctcggcgg cgggggcggc ggccttgccc ttctcggcct
      241 tcggctccgc ggcgcggcgg cgccggggca ggacgccgcg gcggcgttgc gtgcccgccg
      301 cgctgtcacg gcggcggcgg gcctgcaatt ccgcgtcgga caggcgggcc acgatgatcg
      361 tgatgtggca ggtccgcttg cggatccgcg tcgcccggcc ccgggcccgg ggccgccagc
      421 gcttgatcgt cggcccctcg tcggcgtagg ccacggccac cttcagctcg tcggccggga
      481 tgttgagcag gttgtcggcg ttggccacgg ccgagttcag gaccttcagc acctcacggg
      541 ccgggccgcg ctcgctgaac tgcagcacgt ggcgggcgtc gtcgacgtcg aggccccgga
      601 tgaggtcgag gacctcgcgg accttgtagg ccgacgtgcg gaggtacttg agcgtggccc
      661 tggtctgggg cgtttccttg gtggcggtgt cagccatggc tcaggtctcc taccgccggc
      721 tcgagcgttc ctggccggcg tggtaccgga acgtccgggt cggggcgaat tcgccgagct
      781 tgtggcccac catggcctcg gtgacgtaga cggggacgtg cttgcggccg tcgtgcacgg
      841 cgatggtgtg gcccaccatg tcggggatga tcgtggagcg gcgcgaccac gtcttcacga
      901 cgcgcttctc gccggtctgg ttcagccgtt ccaccttgac ccgcaggtgg tcgtcgatga
      961 atgggccctt cttgagactt ctcggcattg ctacctccgg gccccgcggg cccgcctccg
     1021 gcggatgatc atctggtcgg aggccttgtt cttggacctc gtgcggccct ctttcttgcc
     1081 ccacggcgag gtgggatggc ggccgccgga actcttgccc tcaccgccgc cgagcgggtg
     1141 gtcgaccggg ttcatcgcca cgccccgggt gtgcggacgc cggcccttcc accgggcccg
     1201 ccccgccttc cccagcgaaa ccagctcggc ctcggcgttg ccgaccgagc cgacggtggc
     1261 ccggcagtcg atcgggacgc ggcgcatctc ggtcgacggc agccgcaggg tggcgaaatc
     1321 cccctccttg gccacgagct ggatactcat gccggcgccc cgggcgatct tcccgcccgc
     1381 gccgggcttg agctccacgt tgtggatgac ggtaccgacg gggatgtagc gcatcggcag
     1441 ggcgttgccg gggcggatct cggcgccctg gcccgacatg aggacgtcgc cgaccgcgat
     1501 ccgggccggg gcgaggatgt agcgcttctc gccgtcggcg tagtggagga gggcgatccg
     1561 ggcgttgcgg ttcgggtcgt actcgaccga ggccaccttg gccgggatcc cgtccttctc
     1621 ccggcggaaa tcgatcaccc ggtacttctg cttgtggccg ccgccgacat tgcgggccgt
     1681 gagccggccg tggacgttgc ggccgccggt cgagggcttg gcccgcagga gcgacttctc
     1741 gggccggtcg gtggtgatct cggcgaagtc ggagaccgac tggaagcggc gcccggggct
     1801 ggtcggcttg cgcttgcgga ggggcattcg cgtcagctcc cgaagatgtc gatgcggccg
     1861 tcgccggcca cggtcacgac cgcgcgcttg gtggtcgccc gctgaccgaa ggtgttggtc
     1921 cggcggttgc gcttccgctt gccccggcgg ttcatcgtcg tcacgttggt caccgtgacg
     1981 ttgaagatct cctggaccgc ctggcggatc tcgatcttgt tggcgttggg ggccaccacg
     2041 aacgtgtaga cgttcctgtc gagcagggcg taggacttct cggagacgac cgggcggatg
     2101 atgatgtcgc gcgggtcctt gctcacgact gcccccctcc ccgggccgac aacgccgcca
     2161 gcgtggccga ggtgaagatc acccggtcgg cgacgaggac gtcgtaggtg ttgagctcct
     2221 cggcggtgac gaggtcgacc cggtcgccga ggttgcggaa cgacttccac gccacctcgt
     2281 cgtcgcggcc gagcacgacc aggacccgct cgccggcggc gacgccgacg gagtcgaggg
     2341 cggcgatggc gtccttcgtg cggggagcgg cgaagcccca gtcgtccacg accgtgacca
     2401 tccccgccgc cgcccggtcg gacagcgccg agcgcagcgc cagccacacc atcttcttcg
     2461 gagtccgctg gcggtagctg cggggctggg gcccgtgggc cacgccaccg ccccgccagt
     2521 gcggcgcccg cgacgagccc tgccgggccc ggccggtgcc cttctggcgc cagggcttgg
     2581 cgccgccacc ggagacctcg gcccggctct tggtcgaatg ggtgccggac cgggcggccg
     2641 ccagctgggc ggtgacgacc tggtgcatga ccggcacgtt gggctggatc ccgaagatcc
     2701 cctccggcag cggcgcgttg gcgagaacct cggccatcag cccgccgccc ccttcaccgc
     2761 gttgcggacg aagacgagcc cgccggccgg gccggggacg gcgcccttga tcagcagcag
     2821 accccgctcg gcgtcgccct cgacgacctc gaggttgagg gtcgtcgtgc ggac
//
LOCUS       DATGJT010000108         3282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_636032, whole genome shotgun sequence.
ACCESSION   DATGJT010000108 DATGJT010000000
VERSION     DATGJT010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636032"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VKX24_01885"
     CDS             complement(<1..537)
                     /locus_tag="VKX24_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009153496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HLJ07260.1"
                     /translation="MPPAPNLMDTIVNLAKRRGFVFPSSEIYGGFRSTWDYGPLGVLL
                     KRNVKEAWWRAMVQNRDDVVGLDAAILMAPRVWEASGHVATFSDPLVDCRNCNERFRA
                     DQLPDSGACPNCGAKDSFTEARQFNLMFKTYVGPVEDDASVAYLRPETAQGIFVNFPS
                     VQTTSRKKPPFGIAQIGKA"
     gene            complement(521..1276)
                     /gene="recO"
                     /locus_tag="VKX24_01890"
     CDS             complement(521..1276)
                     /gene="recO"
                     /locus_tag="VKX24_01890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HLJ07261.1"
                     /translation="MAGLYRERGIVLRSIKLGEADRIVTFLTEGRGKVRAVAKGVRKP
                     KSRFGARLEPTTHLNLQLYEGRNLDVVTQVETIDANRKLRESYGAFTQAIAMLEAVDH
                     VAQEAEANIALYRMLAAALRTLADDPVPAVSAAFFWKLLALEGVSPVLDACVRCEETV
                     VDVAATFDVAEGGVLCRACAGPGAPVVPAAGLALVGRILGGGLRGVLAEPPGPALAEA
                     ESLALRALEHHLERRLRSTPMLMASIPGYAPRS"
     gene            complement(1304..2038)
                     /locus_tag="VKX24_01895"
     CDS             complement(1304..2038)
                     /locus_tag="VKX24_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HLJ07262.1"
                     /translation="MLPSDLDRSRIPRHVAVVMDGNGRWARRRGLKRTQGHEAGEEAL
                     FEAVEGALELGIRYLTVYAFSTENWRRPLDEVRFLMNFNESILLRRRQELHERGVRIR
                     FSGRRGGRVPARVLRRMEESEELTRKNRTMTLIIALNYGGRAELADAARAIAREAAAG
                     RLDPDKVDEKVLARHLYLPDVPDPDLLVRTSGEYRLSNYLLWQLAYAELYFTDVLWPD
                     YKREHLYEAVKAYQTRDRRFGGLNEE"
     gene            complement(2067..3044)
                     /locus_tag="VKX24_01900"
     CDS             complement(2067..3044)
                     /locus_tag="VKX24_01900"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ07263.1"
                     /translation="MADEGTGSMKEFRERVLLPLLVPLLALAVIVVVVLNVSRILLAL
                     EERSGPHTVVVVAIIIAAAVLFGFTYASSRNEERSTGAMSLLSVAGILVVIAGFIGYE
                     AMAETQGEEAAKKKAAAGVAKPDITVEAFDIGFKVKDFKIGPGNVVIQEVNTGATAHT
                     FILDGVSSGRKLSVPQGGAKDQATFGLQPGTYTFYCDIPGHRQAGMEGHIEVGPQYPA
                     PGSGGGAAGGAAGGAAAGTPFKITAADLSFTPKEQTLKAGPVAVTYQNTGAIQHTLLI
                     DGDGSFSKLVADPGKTLNGTWNAKPGTYTFYCDIPGHRQAGMQTKVTVQ"
     gene            complement(3037..>3282)
                     /locus_tag="VKX24_01905"
     CDS             complement(3037..>3282)
                     /locus_tag="VKX24_01905"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HLJ07264.1"
                     /translation="ERPIYHFYEHVPRLWGLSAGEDQQIAGLLMKLGGGLLLWMLIAV
                     LFFKWHAADEQNDRESRRWRALEAEIEQGRDPMRWSG"
BASE COUNT          474 a         1191 c         1114 g          503 t
ORIGIN      
        1 ggccttgccg atctgggcga tgccgaacgg cggcttcttg cgcgacgtcg tctgcaccga
       61 cgggaagttc acgaagatgc cctgggccgt ctcgggccgg aggtaggcga cggaggcgtc
      121 gtcctccacc gggccgacgt aggtcttgaa catcaggttg aactggcggg cctcggtgaa
      181 gctgtccttg gcgccgcaat tggggcaggc gccggaatcg ggcagctggt cggcccggaa
      241 ccgctcgttg cagttgcggc agtcgacgag cgggtcggag aacgtggcca cgtgacccga
      301 cgcctcccag acccggggcg ccatgaggat ggcggcgtcg aggccgacga cgtcgtcgcg
      361 gttctggacc atggcccgcc accacgcctc tttgacgttg cgcttgagca gcaccccgag
      421 gggcccgtag tcccaggtgg accggaaccc cccgtagatc tcgctcgacg ggaacacgaa
      481 accccggcgc ttggccaggt tgacgatggt gtccatcaaa ttaggagcgg ggggcatacc
      541 ccggaatgct agccatcagc atcggcgtgc tccgcaggcg ccgctcgagg tgatgctcca
      601 gcgcccgcag cgccagcgac tccgcctcgg ccagcgccgg gcccggcggc tcggccagga
      661 caccccgcag ccccccgccg agaatccgcc ccaccagcgc cagccccgcc gccggcacca
      721 ccggcgcccc cggcccggcg caggcccggc acagcacccc gccctcggcc acgtcgaacg
      781 tcgccgccac gtcgacgacc gtctcctcgc agcgtacgca ggcgtcgagg acgggcgaga
      841 ccccttccag cgccagcagc ttccagaaga acgccgcgct gaccgccggg accgggtcgt
      901 cggccagcgt ccgcagggcg gcggccagca tccggtacag ggcgatgttg gcctcggcct
      961 cctgggcgac gtggtcgacc gcctccaaca tggcgatcgc ctgggtgaag gcgccgtacg
     1021 actcccgcag cttccggttg gcgtcgatgg tctccacctg cgtgacgacg tcgaggttgc
     1081 ggccctcgta gagctggagg ttcagatggg tcgtcggctc gagccgggcg ccgaagcggc
     1141 tcttgggctt gcgcaccccc ttggccaccg cccggacctt gccccgcccc tcggtgagga
     1201 acgtgactat gcggtccgcc tccccgagct tgatgctccg gaggacgatc ccgcgctccc
     1261 ggtacagccc cgccaccacg ccagtgtaac tacgggcctg tgactattcc tcgttcaggc
     1321 ccccgaagcg gcgatcgcgg gtctggtagg ccttcaccgc ttcgtagagg tgctcccgct
     1381 tgtagtcggg ccacaggacg tcggtgaagt acagctcggc gtaggccagc tgccacagca
     1441 ggtagttcga caggcgatac tcgcccgacg tccgtaccag gagatccgga tccgggacgt
     1501 cgggcaggta gagatgccgg gccaggacct tctcgtcgac cttgtcgggg tcgagccggc
     1561 cggcggccgc ctcccgggcg atggcccggg cggcgtcggc cagctccgcc cggccgccgt
     1621 agttgagggc gatgatcagg gtcatcgtcc ggttcttgcg ggtgagctcc tcgctctcct
     1681 ccatccggcg cagcacccgg gcgggcacgc gcccgccccg ccggcccgag aagcggatcc
     1741 gcacaccccg ctcgtggagc tcctggcggc gccgcagcag gatgctctcg ttgaagttca
     1801 tgaggaaccg gacctcgtcg agcggccgac gccagttctc ggtggagaag gcgtagaccg
     1861 tcaggtaccg gatgccgagt tccagggcgc cctccacggc ctcgaagagc gcctcctcgc
     1921 cggcctcgtg gccctgcgtg cgcttgaggc cgcgccgccg ggcccagcgg ccgttgccgt
     1981 ccatcaccac cgccacgtgg cgggggatgc gcgaccggtc gaggtcggag gggagcacgg
     2041 gctaagaccg taccgcccgg gaaccgctac tggacggtga ccttggtctg catgccggcc
     2101 tgccggtgac cggggatgtc gcagtagaac gtgtacgtcc cgggtttggc gttccaggtg
     2161 ccgttcagcg tcttgccggg gtcggccacg agcttgctga acgagccgtc gccgtcgatg
     2221 agcagtgtgt gctggatggc gccggtgttc tggtacgtga ccgccaccgg gccggccttc
     2281 agcgtctgct ccttcggggt gaagctcagg tcggcggccg tgatcttgaa cggcgtaccg
     2341 gccgccgccc cgccggcggc cccgcccgcc gcgccaccgc cgctcccggg cgccgggtac
     2401 tgcgggccga cctcgatgtg gccctccatc ccggcctgcc ggtggccggg gatgtcgcag
     2461 tagaacgtgt acgtcccggg ctggagccca aaggtggcct ggtccttggc gccgccctgc
     2521 ggcacggaca gcttccgccc cgacgacacg ccgtcgagga tgaaggtgtg ggccgtggcc
     2581 ccagtgttga cctcctggat gaccacgttg ccggggccga tcttgaagtc cttcaccttg
     2641 aaaccgatgt cgaaggcctc aaccgtgatg tcgggcttgg ccactccggc cgccgccttc
     2701 ttcttggccg cctcctcgcc ctgcgtctcg gccatcgcct cgtagccgat gaacccggcg
     2761 atgacgacca ggatcccggc caccgacagg aggctcatcg ccccggtcga ccgctcctcg
     2821 ttccgggacg aggcgtaggt gaatccgaac agcacggcgg cggcgatgat gatcgccacg
     2881 accaccacgg tgtgcggccc gctccgctcc tcgagcgcca gcaggatccg cgagacgttg
     2941 aggacgacga cgacgatcac cgccagggcc agcagcggca ccagcagcgg gagcagcacc
     3001 cgttcccgga attccttcat cgagccggtt ccttcatcag ccactccacc tcatggggtc
     3061 gcgtccctgt tcgatctccg cctcgagcgc ccgccagcgg cgggactccc ggtcgttctg
     3121 ctcgtcggcg gcgtgccact tgaagaacag cacggcgatg agcatccaca gcagcagccc
     3181 gcccccgagc ttcatcagca gccccgcgat ctgctggtcc tccccggccg acagccccca
     3241 cagccggggc acgtgctcgt agaagtggta gatcggccgc tc
//
LOCUS       DATGJT010000109         7815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_844026, whole genome shotgun sequence.
ACCESSION   DATGJT010000109 DATGJT010000000
VERSION     DATGJT010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 7815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7815
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844026"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..457)
                     /locus_tag="VKX24_01910"
     CDS             complement(53..457)
                     /locus_tag="VKX24_01910"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLJ07265.1"
                     /translation="MGTVPIELVLVRQAAEYLTQAIFLVDEGGTVLFFNEAAAALLGR
                     PFEDVAPQNIADWLDQLEICDGDGRPVPGTAVPIAQARRDRRPAHAVYEVRCLDGEVR
                     RLAITSVPLIGQGGVLHGAMSLMWDAGGDGGL"
     gene            complement(586..670)
                     /locus_tag="VKX24_01915"
     tRNA            complement(586..670)
                     /locus_tag="VKX24_01915"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(633..635),aa:Leu,seq:tag)
     gene            828..2459
                     /locus_tag="VKX24_01920"
     CDS             828..2459
                     /locus_tag="VKX24_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07266.1"
                     /translation="MGEAASPALALRDLRRARHHRHQADVDWVETLYRVYVTVLSGAA
                     VIWLSASKVSDASAKKGGVADIRDHGAAVLGLVVAFLVALGLRSGSRGGPLSLEAADV
                     RVVLLAPIRRRLALRAPALHQVRSAAFVGLCLGAVVGNLAGHRLPGHFAGWVAADAGF
                     GLVAAVLAVGMALLACGLRLPRPAAGAVGLAVLAWSAADVAAGTVTSPLTIAGRLGLG
                     PLPGDVRGGPLGLAAAVGAVAAVGVLALAIARLGHMSLEAADHRGRLAAQLRFALSLQ
                     DLRAVILLRRRLAAEEPRARPWIALRRGGGRRFGRLSGSETGVAVRRRGLHSLMRWPL
                     TRVLRVGGLGIAAGLAAAGAWKGTTPLVVVAGVALFVAALDALEPLAQEFDHPTRLDS
                     FPVPPAQLADAALLVPAAVLAATALIGVAIALAVTGVAAGPLLISVVPAAAAAVAGGA
                     ASLVLEPVSAAELMSRYPVPEAAGPVLVARLGFAPALAVAGWLPLLAGRAAVHQKVSP
                     EAAVFQSGIAVAGLSIFVVRILANHFQRKRAVPEP"
     gene            2456..3148
                     /locus_tag="VKX24_01925"
     CDS             2456..3148
                     /locus_tag="VKX24_01925"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07267.1"
                     /translation="MTKKETRPPVLEVKGLMRRYATLVALGPLDLEVEEGEFVALVGP
                     NGAGKSTLLACVAGLLDPTEGEVRVAGARAGSLPARAATSYLGDEPVLYDDLSLEEHL
                     EYVARLHGLLDWERPAADLVTRLGLEDRVDDLPAHFSKGMRQKTSIALGLARPFQLLL
                     ADEPFDGLDPPSREVLTDLLSEAAASGAVVIVSTHRLDIAERASRAIALFDGQITYDG
                     PADQATMHKLLP"
     gene            complement(3265..4143)
                     /gene="fdhD"
                     /locus_tag="VKX24_01930"
     CDS             complement(3265..4143)
                     /gene="fdhD"
                     /locus_tag="VKX24_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HLJ07268.1"
                     /translation="MTSPPVSSAAAPEPAPVRRTVTPSRALAWRDGTAIERPERLATE
                     EPMEVRAAGPGQEPVSVAITMRTPGHDFELAVGFLVGEGLIRARGEVAAVRYCDLPPE
                     EPQLYNIVTVALTRPFEPAGAERRFYTTSSCGICGKASLDQVEVHCAGIPAGPPVPAS
                     VVVSLPDRLRKAQRIFEQTGGLHAAGLFDRAGKVVAVREDVGRHNAVDKLVGRALLAG
                     ELPLSDKVMMVSGRVSFELVQKAAVAGVPVICAVSAPSSLAVEAAERLGLAVVGFVRG
                     RGFNVYSHRERVELNA"
     gene            complement(4151..4747)
                     /locus_tag="VKX24_01935"
     CDS             complement(4151..4747)
                     /locus_tag="VKX24_01935"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HLJ07269.1"
                     /translation="MAPPGPVAGLLLTGGASRRMGADKALLEVDGQRLVDRAAAALRA
                     VADPVLEVGPGFSALPAVREDPPGTGPLAAVATGAAALRAAGHDGPVIVLAVDMPFVT
                     VELLRLLASRAGPATAVPRDGGHPQVLCARYGPDALAAVDRLLAAGGVSLRKLLEAMD
                     ARGEVGWIQPEEWRPVAGAEALADVDTPDDLRRLLERP"
     gene            complement(4774..5787)
                     /locus_tag="VKX24_01940"
     CDS             complement(4774..5787)
                     /locus_tag="VKX24_01940"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HLJ07270.1"
                     /translation="MSALRQSDLDRSPERPAAPSRGPIHVAGMARAGTSWVAEMLRAA
                     GGFVHLNEPFNPKRPPGGSPGILNASVPVGYIYVAGHNAPEFRPALHDTFRFRYRHLA
                     ELRQNHSWFDLAKMGKYSTTFAAGALRRKRPLLDDPYASLAAPWIAEEFDGQVAVLVR
                     HPAAMVASYRKLGYRAHFRHFLEQPQLMADHLEPWRAEMEALVDTDDRVTQVATFWKL
                     LHHVLFQMVDGSDRLHVVRYEDLCADPEGEYERLFARLGLEFNDAARAEVVAGTQGSS
                     KNQSHAWRVSRHGGLSRTAFRPMDSKAMVRAWEKTISPGEAARIRAITAPVADRLYGP
                     SDW"
     gene            complement(5784..7175)
                     /locus_tag="VKX24_01945"
     CDS             complement(5784..7175)
                     /locus_tag="VKX24_01945"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HLJ07271.1"
                     /translation="MPHAPLAAISMSDVEITRLFVAIVALLGMALLMGSVFERLRMPR
                     VIGEIAGGVLLGPTLLGAIAPSAYHWTFAAYPEEGKLLAMASEFGLVLLMFMSGMEIK
                     ARFAREDRKVAIPLLFGATALPFLIGIAAPQVFDFKPYMGPHGNTAALTIIIGIAVAI
                     TSIPVISKIFLDLGMMRTRFARICLTVATVEDIALWGLLAVALSLAGSAHPSMYLLIK
                     TPIVTILFFLAAMVVLPRILRRLHDTPARGVVENRPARFALLACFAMVAAAELLGVKD
                     MFGALLAGMAICRLPNDVVEVVRTKVKAFALVFFTPIYFAIVGLKLDLLKHFDIPFFL
                     GFFLFCTLIKTAAVAAAGRHGTRDWLSTVNLAAALNARGGPGIVLASVCYDAGVIDQR
                     FFITLVMTAVVTSLFAGGWFRYVLGKGWPLLRVQGETLPDEDGGGGDDDDEDDRRLAP
                     VTALADRMKEPVR"
     gene            7318..>7815
                     /locus_tag="VKX24_01950"
     CDS             7318..>7815
                     /locus_tag="VKX24_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006130621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:7558..7560,aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLJ07272.1"
                     /translation="MAYRRITQPLVRRSGELAPASWDEALDRAADGFRRAVERGGPDA
                     VGMFSCSKATNEVNFVAQKFMRVAIGSNNIDSCNRTUHAPSVVGLATVFGAGGGTSSY
                     AEVEDTDVIVLWGSNARETHPIFFHHVLAGVRNGAELIVVDPRRTASARFAAAWLGLD
                     VGTDIA"
BASE COUNT         1025 a         2884 c         2901 g         1005 t
ORIGIN      
        1 gagccgggcc ggggcgagaa cagcgagccc cgggtgccga gcaggcggac cctcataggc
       61 cgccgtcccc gccggcgtcc cacatcagcg acatggcgcc gtggagcact ccgccctggc
      121 cgatgagcgg aaccgatgtg atggccagcc ggcggacctc gccgtcgagg cagcgcacct
      181 cgtagacggc gtgggccggg cgccggtcgc ggcgggcctg ggcgatcggg acggcagtcc
      241 ccggcaccgg gcggccgtcg ccgtcacaga tctcgagctg gtcgagccag tcggcgatgt
      301 tctgcggcgc cacgtcctcg aacggccggc cgaggagggc cgccgccgcc tcgttgaaga
      361 acaggacggt tccgccctcg tcgacgagga agatcgcctg ggtgaggtac tcggccgcct
      421 gccgcaccag cacgagttcg atcgggacgg tccccacggg cctcctcttc ggggacatcc
      481 cgcgttcggg ttcccacacg ccggaccgcc agcctacggc agcggtgttt tcccgtctgc
      541 cgtcgcgacg acgcccggaa tgtcacaggg gcgacacacc gtccgtgcga gcggggggat
      601 ttgaaccccc acgaccttgc ggtcaccggg tcctaagccc ggcgcgtctg cctcgttccg
      661 ccacgctcgc ctgccattcg tttctacggc acggccgccg cccctggatg catgttttct
      721 tgccggggcc cgccgacggc aatcgggccc ggtgggaccg ggcggaggcg gggcgatagc
      781 gtcaaccgcc gctgggcccg gatgagcgcg cgaaggagga ggacgacgtg ggggaggccg
      841 ccagcccggc gctcgccctg cgcgacctcc gccgggcccg ccaccaccgc caccaggccg
      901 acgtcgactg ggtggagacg ctctaccggg tctacgtgac cgtcctgtcg ggggcggcgg
      961 tgatctggct gtcggcctcg aaggtcagcg acgcctcggc caagaagggc ggcgtggccg
     1021 acatccggga ccacggggcc gccgtcctcg gcctggtcgt ggccttcctc gtggccctcg
     1081 ggctgcggtc ggggagccgg ggcggcccgc tgtcgctgga ggcggccgac gtccgggtcg
     1141 tgctcctggc gcccatccgc cggcggctgg cgctgcgggc gccggcgctg caccaggtcc
     1201 gctcggcggc gttcgtcggc ctctgcctcg gcgccgtggt gggcaacctc gccgggcacc
     1261 ggctgccggg ccatttcgcc ggctgggtcg ccgccgacgc cgggttcggg ctggtggccg
     1321 cggtgctggc cgtgggcatg gcgctcctgg cctgcgggct gcggctgccc cgcccggcgg
     1381 ccggcgccgt cggcctcgcc gtcctcgcct ggtcggcggc cgacgtcgcc gccggcacgg
     1441 tgacgtctcc gctcacgatc gccggccgcc tcgggctcgg gccgctgccc ggcgatgtcc
     1501 ggggcgggcc gctcggcctg gcggcggcgg tgggcgccgt cgcggccgtc ggcgtcctcg
     1561 ccctggcgat cgcccgcctc ggccacatgt cgctggaggc ggccgaccat cggggccggc
     1621 tggccgccca gctccgcttc gccctcagcc tccaggacct gcgggccgtc atcctgctcc
     1681 ggcgccgcct ggccgccgag gaaccccggg cccgcccctg gatcgccctc cgccgcggcg
     1741 gcgggcggcg gttcggccgg ctgagcggat cggagaccgg cgtcgccgtc cgccgccggg
     1801 gcctccacag cctcatgcgg tggccgctca cccgggtcct gcgcgtcgga gggctcggga
     1861 tcgccgccgg cctcgccgcc gccggggcct ggaagggcac cacgccgctg gtcgtggtgg
     1921 ccggcgtggc cctcttcgtc gccgccctcg acgcgctcga gccgctggcc caggagttcg
     1981 accatcccac ccggctcgac agcttcccgg tccccccggc ccagctggcc gacgccgccc
     2041 tcctcgtccc ggcggcggtg ctggcggcca cggccctcat cggagtggcc atcgccctcg
     2101 ccgtcaccgg cgtggccgcc gggccgctgc tgatctcggt tgtccccgcc gcggcggccg
     2161 ccgtggccgg cggcgccgcc agcctcgtcc tcgagcccgt cagcgccgcc gagctgatgt
     2221 cccgctaccc ggtgccggag gcggccgggc ccgtcctcgt ggcccggctg ggcttcgccc
     2281 ccgccctggc cgtggccggg tggctgccgc tgctggccgg gcgggccgcc gtccaccaga
     2341 aggtctcgcc cgaggccgcc gtcttccagt ccggcattgc cgtcgccggt ctgtcgatct
     2401 tcgtcgtgcg gatcctggcc aaccacttcc agcgcaaacg ggcggtcccc gagccgtgac
     2461 gaagaaggag accaggccgc cggtcctcga ggtcaagggg ctcatgcgcc gctacgccac
     2521 gctggtggcc ctcgggccgc tcgacctcga ggtcgaggaa ggggagttcg tggccctcgt
     2581 cgggcccaac ggcgccggca agtcgacgct gctggcctgc gtggccgggc tgctcgatcc
     2641 gaccgagggg gaggtgcggg tcgccggcgc ccgggccgga tcgctgcccg cccgggcggc
     2701 gacgtcgtac ctcggcgacg agcccgtcct ctacgacgac ctgagcctgg aggagcacct
     2761 ggagtacgtc gcccggctcc acgggctcct cgactgggag cggccggccg ccgacctcgt
     2821 cacccgcctc ggcctcgagg accgggtcga cgacctgccg gcccacttct ccaaaggcat
     2881 gcggcagaag acgtcgatcg ccctcggcct ggcccggccc ttccagctgc tgctggccga
     2941 cgagcccttc gacggcctcg acccgccgag ccgggaggtc ctgaccgacc tgctctccga
     3001 agcggcggcc agcggcgccg tggtcatcgt gtcgacccac cgcctcgaca tcgccgagcg
     3061 ggccagccgg gccatcgccc tcttcgacgg ccagatcacc tacgacggcc cggccgacca
     3121 ggcgacgatg cacaaattgc ttccgtagcc cggcaggccg ggctacgggc tgctctggcg
     3181 acttcgccgc cccggacggg gccccaaccc cgtcctcctc cggagcatgg gggcccctgc
     3241 cccatgcccg gccgtgccgg ggagtcaggc gttcagctcg acgcgctccc ggtgggagta
     3301 gacgttgaag ccccggcccc ggacgaagcc gaccacggcc aggccgagcc gctcggcggc
     3361 ctccaccgcc aggctcgacg gcgcggagac ggcgcagatg accggcacgc cggccaccgc
     3421 cgccttctgg accagttcga agctgacccg gcccgagacc atcatcacct tgtcggacaa
     3481 gggaagctcg ccggccagca gcgcccggcc gacgagcttg tcgacggcgt tgtggcgccc
     3541 gacgtcctcc cggacggcga ccaccttgcc cgcccggtcg aagagaccgg cggcgtggag
     3601 gccgccggtc tgctcgaaga tccgctgggc cttgcggagc cggtcgggga gcgacaccac
     3661 caccgacgcc ggcaccggcg gcccggccgg gatcccggcg cagtgcacct cgacctggtc
     3721 gagcgacgcc ttgccgcaga tgccgcagct ggacgtggtg tagaagcggc gctcggcccc
     3781 ggccggttcg aagggccggg tcagcgccac cgtgacgatg ttgtagagct ggggttcctc
     3841 gggcgggagg tcgcagtacc ggacggcggc gacctcgccc cgggcccgga tcaggccctc
     3901 gccgacgagg aagccgacgg cgagttcgaa gtcgtggccc ggggtgcgca tcgtgatggc
     3961 cacgctgacg ggctcctggc ccggcccggc ggcccggacc tccatcggct cctcggtggc
     4021 caggcgctcg ggccgctcga tggccgttcc gtcgcgccag gcgagggccc gggacggcgt
     4081 caccgtccgc cggacgggcg ccggctcggg cgcagcggcg gaggacaccg gcggcgaggt
     4141 catcccccca tcatggtcgc tccagcagcc ggcgcaggtc gtcgggcgtg tcgacgtcgg
     4201 ccagcgcctc ggcgccggcc accggccgcc actcctcggg ttggatccag cccacctcgc
     4261 cccgggcgtc catcgcctcc agcagcttcc gcagcgacac cccgccggcg gccagcagcc
     4321 ggtcgacggc ggccagggcg tcgggcccgt agcgggcgca cagcacctgg ggatggccgc
     4381 cgtcccgggg aacggcggtg gccggcccgg cccgggaggc cagcagccgg agcagctcga
     4441 cggtcacgaa cggcatgtcg acggccagca cgatgaccgg cccgtcgtgg ccggcggccc
     4501 gcaatgccgc cgcaccggtc gccaccgccg ccagggggcc ggtgcccggc gggtcctccc
     4561 ggacggccgg aagcgccgag aagcccggcc cgacctccag cacgggatcg gcgacggcgc
     4621 gcagggccgc cgcggcccgg tcgaccaacc gctgcccgtc gacctcgagg agcgccttgt
     4681 ccgcccccat ccgccggctc gccccgcccg tcagcagcag accggcgacc ggaccgggag
     4741 gggccatgcc gacgtcttag cagccgggac gccctaccag tccgacgggc cgtagagccg
     4801 gtcggcgacc ggggccgtga tggcccggat gcgggccgcc tcgccgggtg agatcgtctt
     4861 ctcccaggcc cggaccatgg ccttggagtc catcggccgg aacgccgtgc gggacaggcc
     4921 gccgtggcgc gacacccgcc aggcgtgcga ctggttcttc gagctgccct gcgtgccggc
     4981 gacgacctcc gcccgggcgg cgtcgttgaa ctccaggccc agccgggcga aaagccgctc
     5041 gtactcgccc tcgggatcgg cgcagaggtc ctcgtagcgg acgacgtgga ggcgatccga
     5101 cccgtccacc atctggaaga ggacatggtg gaggagcttc cagaacgtcg ccacctgggt
     5161 gacgcggtcg tcggtgtcga cgagggcctc catctccgcc cgccacggct cgaggtggtc
     5221 ggccatcagc tgcggctgtt cgaggaagtg gcggaagtgg gcccggtagc cgagcttgcg
     5281 gtagctggcg accatggccg ccgggtggcg gacgaggacg gcgacctgcc cgtcgaactc
     5341 ctcggcgatc cacggcgcgg ccagcgaggc gtaggggtcg tcgagcagcg ggcgcttgcg
     5401 ccgcaaggcc cccgcggcga aggtggtcga gtacttgccc atcttggcca ggtcgaacca
     5461 ggaatggttc tggcgcagct cggccaggtg ccggtaccgg aagcggaacg tgtcgtgcag
     5521 cgccgggcgg aactcagggg cgttgtgccc ggcgacgtag atgtagccga cggggacgga
     5581 ggcgttgagg atgccggggg acccgcccgg gggccgcttg ggattgaagg gctcgttgag
     5641 gtggacgaac ccgccggcgg cccggagcat ctccgccacc cagctcgtgc cggcccgggc
     5701 catgccggcg acgtggatcg gccctcggga cggcgccgcc gggcgttccg gcgaacggtc
     5761 gagatcggac tggcgcagcg cgctcatcgg accggctcct tcatgcgatc ggccaacgcc
     5821 gtcaccggcg ccagcctgcg gtcgtcctcg tcgtcgtcgt cgccgccgcc gccgtcctcg
     5881 tcggggagcg tctcgccctg cacccgcagc aacggccagc ccttgcccag cacgtatcgg
     5941 aaccagccgc cggcgaacag cgacgtcacc accgccgtca tgaccagggt gatgaagaag
     6001 cgctggtcga tgacgccggc gtcgtagcac accgaggcca gcacgatgcc gggcccgccc
     6061 cgggcgttga gggcggcggc caggttcacc gtcgacagcc agtcccgggt gccgtggcgg
     6121 ccggcggccg ccaccgccgc cgtcttgatg agcgtgcaga acaggaagaa cccgaggaag
     6181 aacgggatgt cgaagtgctt gagaaggtcg agcttcagcc cgacgatggc gaagtagatc
     6241 ggggtgaaga agacgagggc gaaggccttg accttggtcc gcacgacctc gacgacgtcg
     6301 ttgggcaggc ggcatatcgc catgccggcc aggagggcgc cgaacatgtc cttcacgccg
     6361 agcagctcgg ccgcggccac catggcgaag caggccagca gggcgaaccg ggccggccgg
     6421 ttctcgacca ctccccgggc cggggtgtcg tgcaggcggc ggaggatgcg gggcagcacc
     6481 accatcgccg ccaggaagaa caggatcgtg acgatcggcg tcttgatcag gaggtacatc
     6541 gacgggtggg ccgacccggc cagcgagagc gccacggcca gcagccccca gagggcgatg
     6601 tcctccaccg tggccaccgt caggcagatc cgggcgaagc gggtgcgcat catcccgagg
     6661 tcgaggaaga tcttcgagat caccgggatc gacgtgatgg cgacggcgat gccgatgatg
     6721 atcgtcagcg ccgcggtgtt gccgtgcggg cccatgtagg gcttgaagtc gaagacctgc
     6781 ggggcggcga tgccgatgag gaacggcagg gccgtggcgc cgaacagcag cgggatggcg
     6841 accttgcggt cctcccgggc gaagcgggcc ttgatctcca tgcccgacat gaacatcagc
     6901 aggaccagcc cgaactcgct ggccatggcc aggagcttcc cctcctcggg ataggcggcg
     6961 aaggtccagt ggtaggccga gggggcgatg gccccgagca gcgtcggccc gaggaggacg
     7021 ccgccggcga tctcgccgat cacccggggc atccggagcc gctcgaacac gctgcccatg
     7081 aggagggcca tgccgaggag ggcgacgatg gccacgaaca ggcgcgtgat ctcgacgtcg
     7141 ctcatcgaga tggccgccaa gggcgcgtgg ggcatgaagg gacctcgtca gcggggggac
     7201 ctgacaggac tctgttctgc ggccgacccc cgtcctcctg ccgggacgag gcggacgaac
     7261 cgggcgggac cgggtcagcg ggcgtgctca ggggtgcgtc agaggtaccg ttgcgccatg
     7321 gcataccgac gaatcacgca gccgctggtg cggcggagcg gggagctggc gccggcctcg
     7381 tgggacgagg cgctcgaccg ggcggcggac ggcttccggc gggcggtgga gcggggcggg
     7441 cccgatgccg tggggatgtt ctcctgctcc aaggccacca acgaggtgaa cttcgtggcc
     7501 cagaagttca tgcgggtggc catcggctcc aacaacatcg actcctgcaa ccgcacctga
     7561 cacgccccgt cggtcgtcgg tctggcgaca gtcttcggag cggggggcgg caccagcagc
     7621 tacgccgagg tggaggacac cgacgtcatc gtcctctggg gcagcaacgc ccgggagacc
     7681 cacccgatct tcttccacca cgtgctggcc ggggtgcgca acggcgccga gctgatcgtc
     7741 gtcgatcccc ggcggacggc ctcggcccgc ttcgccgccg cctggctggg cctcgacgtc
     7801 ggcaccgaca tcgcc
//
LOCUS       DATGJT010000110         2954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_636614, whole genome shotgun sequence.
ACCESSION   DATGJT010000110 DATGJT010000000
VERSION     DATGJT010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636614"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..938)
                     /locus_tag="VKX24_01955"
     CDS             complement(252..938)
                     /locus_tag="VKX24_01955"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HLJ07273.1"
                     /translation="MVLGVGALLAIVGGVVVLIVAAVVALVLAVVASLYADRVVLKLS
                     HARPVSADEEPRYHNLVEGLCVSAGLRKPELYVVDDAAANSFATGRNPAHAAVVVTTG
                     LLRKLSRVELEGVLAHELSHVRSNDIRVTSLGTALVGLPLMPAGELSTRLLASLVGRA
                     RERDADLFGVRLTRYPPGLAAALDNIRRDGGASLPASRAMAHLWISSPLDDADGATRL
                     EERIAALRDM"
     gene            1194..>2954
                     /locus_tag="VKX24_01960"
     CDS             1194..>2954
                     /locus_tag="VKX24_01960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07274.1"
                     /translation="MNRIRIGLAGLVVASLTGISAGGASAAVSGRGTASSSITLLSVD
                     LGNVQHLKVLTDQGQGTLDPARLGLSGPQAFASLSAVDASGLLNLSLPNPAMKASAPG
                     TSNASLAPLAVNFPGSAVSVAGASLPVGAGLIASGTINPVKIEANQSDAAVSSDVGTT
                     VPDLSVLQGLIDVKGVNIAGLNTSASASASKGDTGIVGIDSVDVLSLQGLLGGLGLNL
                     ADLPLGSLTGILDQLGLSVPGVGSVGNLSGANITELLNNVTGLLNVKNGLAGAADCSA
                     LTSLVNSNLGGLPDLTGILAGNGSPLGGVLGLLGLSSGTTGLTGLLGTCSTVSALTQP
                     VLNIINPTLNSLLPDATSAVDGLLNVLNGAPLISLQGVNLSAMANAADTLANSSATTT
                     ANFGHILVGGKDLGVIDLNATIDQINALKGSVLGLVNGITSTLGLGNLIDIGLLERTA
                     STKVDGAYNVASAGLDLLRVSINPPANLGGLLQTVTANPLSGVLGSLGAAVPADTGLA
                     TNALAQAFNLTSLLTQPTTIKVGSIGADADFTTAVEGQTVSQSPASGQTGPAGTLPRT
                     GGTNGAWYAALAAISLAGAFG"
BASE COUNT          456 a         1096 c          986 g          416 t
ORIGIN      
        1 gagcggcccg tccttgaccg cgccgtccga taccgccgtg ctcgtcggca acttcgccgc
       61 cgccggcacc ggcgccttcc cgcctccgcc cccgccgcag gccgtggcgg ccagaagaga
      121 tccgagaccg atcgcgaggg cagggatacg catgcgcatc acgggagtaa atcacacctt
      181 tgttgtttcg gagaggatct gccgcccacg ttgcctttcg ggggtcctcg gggggcggag
      241 ccccccgagt gctacatgtc gcggagagcg gcgatgcgct cctccagcct cgtggccccg
      301 tcggcgtcat ccagcggcga ggagatccag aggtgggcca tggcccgcga cgccggcagg
      361 ctagcgccgc cgtcccggcg gatgttgtcg agggccgcgg cgagaccggg cggatagcgg
      421 gtcagccgga cgccgaagag gtcggcgtcg cgctcccggg cccgtccgac gagagaggcc
      481 agcagccggg tcgacagctc gccggcgggc atcagcggca gcccgacgag cgccgttccc
      541 aggctggtca cccggatgtc gttgctgcgg acgtgggaca gctcgtgggc cagtacgccc
      601 tcgagctcca cccgggacag cttgcggagc agcccggtgg tcacgacgac ggcggcgtgg
      661 gccgggttgc ggccggtggc gaagctgttg gcggcggcgt cgtcgacgac gtagagctcc
      721 ggcttgcgca gcccggccga cacgcacagg ccctcgacga ggttgtggta ccggggttcc
      781 tcgtcggccg agacgggccg ggcatgactc agctttaaga cgacccggtc ggcgtagagc
      841 gaggcgacga cggcgaggac tagtgcgacg accgccgcca caatgaggac gacgacgccc
      901 cccacgatcg ccagcagggc gccgaccccc agcaccacga gggcaaaagc cccaaggagg
      961 acggccgact ggcggcggtt gcgggcgatg tgttcggcga tggggtcatc ctaggtgcga
     1021 acggcccggg gacgtcctgg gccaaattgg tacgaaggcg tggtgactag ttcttcctga
     1081 ccaccgaaat agttctttcg ggccatgttc cggggggccc gtagcaccga tcttgcctct
     1141 gtgccccctc gcggctgttg gggccagtca agtgacgaaa ggacgttttc aaggtgaata
     1201 ggatccggat cgggctggca ggcctggtcg tcgcctccct gacgggaatc tcggccggag
     1261 gggcaagtgc ggccgtgtca gggcgcggga cggcctcctc cagcatcact cttctcagcg
     1321 tcgacctcgg caatgtccaa cacctcaagg ttctgaccga ccaggggcag gggaccctgg
     1381 acccggcccg cctcggcctc tccgggccgc aggcattcgc ttcgctctcc gccgtcgacg
     1441 ccagcgggct gttgaacctc tcgctgccga acccggccat gaaggccagc gccccgggca
     1501 cgagcaacgc ctcgctggcc cccctggccg tgaacttccc cgggagcgcc gtctccgtgg
     1561 ccggcgccag tctccccgtc ggcgccggac tcatcgccag cggcacgatc aacccggtca
     1621 agatcgaggc caaccagagc gacgccgcgg tgtcgtcgga cgtcggcacc accgtccccg
     1681 acctctcggt cctgcagggc ctgatcgacg tcaagggcgt caacatcgcc ggcctcaaca
     1741 ccagcgcctc ggcgtcggcc agcaagggtg acaccggcat cgtcgggatc gacagcgtcg
     1801 acgtcctcag cctccagggc ctcctcggcg gcctcgggct gaacctcgca gatctgcccc
     1861 tcggctcgct gacggggatc ctcgaccagc tcggcctctc cgtgccgggt gtcgggagcg
     1921 tcggcaacct gagcggcgcc aacatcaccg agctgctcaa caacgtcacg ggcctgctca
     1981 acgtgaagaa cggcctggcg ggcgcggccg actgcagtgc cctcacctcg ctggtcaaca
     2041 gcaacctggg cggcctgccc gacctgaccg gcatcctcgc cggcaacggc agcccgctcg
     2101 gcggcgtcct cggcctgctc gggctgtcct cgggcacgac cggcctcacc ggcctgctcg
     2161 gcacctgcag caccgtctcc gcgctgaccc agccggtgct caacatcatc aacccgacgc
     2221 tgaacagcct gctgccggac gccaccagcg ccgtcgacgg cctgctcaac gtcctcaacg
     2281 gcgctccgct gatctcgctg caaggtgtga acctctcggc gatggccaac gccgctgaca
     2341 ccctggccaa ctcctcggcc acgacgacgg ccaacttcgg ccacatcctc gtgggcggca
     2401 aggacctggg cgtcatcgac ctcaacgcca ccatcgacca gatcaacgcc ctgaagggca
     2461 gcgtcctcgg cctggtcaac gggatcacga gcacgctcgg cctcgggaac ctgatcgaca
     2521 tcgggctcct ggagcggacc gcctcgacca aggtggacgg cgcctacaac gtggccagcg
     2581 ccggcctcga cctgctccgg gtgagcatca acccgccggc caacctcggc ggcctgctcc
     2641 agacggtcac cgccaacccg ctgtcgggcg tgctcggcag cctcggcgcc gccgttccgg
     2701 ctgacaccgg actggcgacc aacgccctgg cccaggcctt caacctgacc tcgctgctca
     2761 cgcagccgac cacgatcaag gtcgggtcca tcggggccga cgccgacttc accactgcgg
     2821 tggagggcca gaccgtgtcg cagtcgcccg cctcgggcca gaccggcccg gccggcaccc
     2881 tgccccggac cggtggcacg aacggcgcct ggtacgccgc cctggcggcc atcagcctgg
     2941 ccggtgcctt cggc
//
LOCUS       DATGJT010000111         2267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_844276, whole genome shotgun sequence.
ACCESSION   DATGJT010000111 DATGJT010000000
VERSION     DATGJT010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844276"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..979)
                     /locus_tag="VKX24_01965"
     CDS             complement(<1..979)
                     /locus_tag="VKX24_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011603198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07275.1"
                     /translation="MIAKGQAQGSLTTGDVFDALPDVEPSPGQLDAIYNHIRASGIEL
                     VDEIAADLQAEDDDDLADPSAPLAAPPAVPIPLIVPVPIPDAPPAAAEPVAGTAAAPA
                     ALPKARRAPRPEAAPGENVRPDRVGEGGVSDPVRMYLKEIGKVPLLTGAQEVSLAQRI
                     EQGLLASGRMAEANGRLSPEEQDRLGSTVVDGHRAKRQLIEANLRLVVSIAKRYVGRG
                     MLLLDLIQEGNLGLMRAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHM
                     VETINKVVWAQRQLLQELGREPTPEEVAQRVEFPIERVREIQRLSLDTVS"
     gene            complement(1053..>2267)
                     /locus_tag="VKX24_01970"
     CDS             complement(1053..>2267)
                     /locus_tag="VKX24_01970"
                     /inference="COORDINATES: protein motif:HMM:NF024554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HLJ07276.1"
                     /translation="NKLQDFFRARVMFPIFDVRGDPVAFGGRALEGGPKYKNSPESPI
                     YQKSRVLYGLNWAKPDIVAKSEAVICEGYTDVIAFFGAGVARAVATCGTALAEDHLKV
                     LRNFAPNLVLAYDADDAGQNAALRIYQWEASYEIRLSVADLPPGQDPADLGLSDPARL
                     AAAVAGARPFLEFRIERLLRAADLGSVEGRAAAAKGAVAVIAEHPDDLVRDQYLMQLA
                     ERVGIDVDRLRRAAAAGAVAGAAASNAPPPRAGAARRRPPARDRAEVEALRVAVHEPG
                     LVADRLDGALFTDPVVREAYCLLASSATFHEALERAGGEVHELLQRLAVEDLPWADDP
                     ATYATSVLVQLVEAAGTRRLAVMVRTGDDRASDLKAVLETLVSNRSAGTWTVAADAAE
                     QLLPWVAGSGEE"
BASE COUNT          295 a          806 c          843 g          323 t
ORIGIN      
        1 gcgacaccgt gtcgaggctg agccgctgga tctctcgcac gcgctcgatc gggaactcca
       61 cccgctgggc cacctcctcg ggcgtcggtt cgcgccccag ctcctggagg agctggcgct
      121 gtgcccagac caccttgttg atcgtctcca ccatgtggac ggggatccgg atcgtgcggg
      181 cctggtcggc gatggcccgg gtgatggcct ggcggatcca ccaggtggcg tacgtcgaga
      241 acttgaaacc cttggtgtag tcgaacttct cgacggcccg catgaggccg aggttgccct
      301 cctggatcag gtcgaggagc agcatgcccc ggcccacgta gcgcttggcg atggagacga
      361 ccagccggag gttggcctcg atgagctggc gcttggcccg gtggccgtcg acgacggtgg
      421 accccagccg atcctgctcc tccggggaga ggcggccgtt ggcttcggcc atgcggccgg
      481 aggccagcag gccctgctcg atgcgttggg ccaggctgac ctcctgggcg ccggtcaaaa
      541 gcgggacctt gccgatctcc ttcagataca tgcggaccgg atcggacacg ccgccctcgc
      601 cgacccggtc ggggcggacg ttctcgccgg gggcggcttc cggccggggc gcccggcggg
      661 ccttcggcag cgccgccggc gcggcggcgg tgccggcgac gggctcggcg gcggccggcg
      721 gcgcgtcggg gatcgggacc ggcacgatca acgggatcgg gacggccggc ggtgcggcca
      781 gcggcgccga cgggtcggcc aggtcgtcgt cgtcctccgc ttggaggtcg gcggcgatct
      841 cgtcgaccag ctcgatgccg ctggcccgga tgtggttgta gatggcgtcg agctgcccgg
      901 gcgagggctc gacgtcgggc agcgcgtcga agacgtcgcc ggtggtgagc gaaccctggg
      961 cctgcccctt cgcgatcaac ccggccagcc cgccttcggg cagaccttcc aggtcgtcag
     1021 cggatgggct gatcggctcc cccacgcaat ctctactcct cgcctgagcc ggcaacccag
     1081 ggtagcaact gttctgcggc gtcggcggca accgtccatg tcccggcgga acggttcgac
     1141 accaatgtct ccaggacggc cttcaagtcg ctggcgcggt cgtcgccggt gcgcaccata
     1201 acggccagcc ggcgggtgcc ggccgcctcg accagctgca ccagcaccga cgtggcatag
     1261 gtcgccgggt cgtcggccca gggcaggtcc tcgaccgcca gtcgctgcaa cagctcgtgc
     1321 acctcgcctc cggcgcgttc gagcgcctcg tggaacgtag ccgaggacgc cagcaggcag
     1381 tacgcctccc gcaccacggg atcggtgaag agggcgccgt cgagccggtc ggcgacgagg
     1441 cccggctcgt gaacggcgac tcgcagcgct tcgacctcgg cccggtcccg ggccgggggc
     1501 cggcgccgcg ccgcaccggc cctcggcggc ggggcgttcg aggccgcggc gccggcgacg
     1561 gcgccggccg ccgccgcccg gcgcagccgg tcgacgtcga tgccgacccg ctcggccagc
     1621 tgcatgaggt actggtcgcg gaccaggtcg tcggggtgtt cggcgatgac ggccacagcg
     1681 cccttggccg ccgccgcccg gccctcgacg ctgccgagat cggccgcccg gagcagccgc
     1741 tcgatccgga actcgaggaa cggccgggcg ccggcgacgg ccgccgccag gcgggcgggg
     1801 tcggagaggc cgaggtcggc cggatcctgc cccggcggca ggtcggccac cgagagccgg
     1861 atctcgtagc tcgcctccca ctggtagatc cgcagggcgg cgttctggcc cgcgtcgtcg
     1921 gcgtcgtagg ccaggacgag gttgggggcg aagttgcgca ggaccttcag gtggtcctcg
     1981 gccagggccg tgccgcaggt ggccaccgcc cgggcgacgc cggcgccgaa gaaggcgatg
     2041 acgtcggtgt agccctcgca gatcaccgcc tcggacttgg ccacgatgtc tggcttggcc
     2101 cagttcagcc cgtagaggac gcggctcttc tggtagatcg gcgactccgg cgagttcttg
     2161 tacttcgggc cgccctccag cgcccggccg ccgaaggcca ccgggtcgcc ccgcacgtcg
     2221 aagatcggga acatcacccg ggcccggaag aagtcctgca gcttgtt
//
LOCUS       DATGJT010000112         4177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_844407, whole genome shotgun sequence.
ACCESSION   DATGJT010000112 DATGJT010000000
VERSION     DATGJT010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4177
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844407"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VKX24_01975"
     CDS             complement(<1..581)
                     /locus_tag="VKX24_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020510378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07277.1"
                     /translation="MNILELRQITKSYGAGPGEVRAVRGISLSVEAGGLLALMGPCGS
                     GKSTLLAIAGTLEEPSSGEVIIEGAEVSAMSREARARLRRRSIGYVFQDDNLLPGLTA
                     AENVALPMELDGVAARSARMAGLAVLEALGLGERAGRYPDELTGGERQRVAIARAIVG
                     ERRLLLADEASGAVDPESGDAVMRLVRAACQMGV"
     gene            840..2195
                     /locus_tag="VKX24_01980"
     CDS             840..2195
                     /locus_tag="VKX24_01980"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HLJ07278.1"
                     /translation="MDEAHTHPGPLPAAEPHDRAGTPAGLAALRIRQVRRSAQRRVVA
                     GVAGGLAEQLRVDPTILRLGFVLLGLCGGAGAVIYAVLWATLPAEDPSRPAAPLDAGV
                     QRGLAVALIIGGFVLLLVAGGLWFGPVVTWSVALVSLGVTVVWLRGNDTDRARWSRKA
                     RGAPSSALDALAGKPIGRFRLALGAMLVLLGLLVFLTGTHLLQAHGSVVVAVLITAGG
                     AMLIAGPWGWRLVTALGSERRERIRSEERAEMAAHLHDSVLQTLALIQRSDQPREMVA
                     LARSQERELRAWLMGREPTVADGSRPAATVAQAVEKVGATVELQFKVPVEVVTVGDAP
                     LDDRLQAIVDATREGLVNAAKHSGADQISLYVEVEPHAVTAFVRDQGCGFDPESAAPD
                     RRGIAQSIRGRMQRAGGTASVVSEPGGGTEVQLVLPRIVARQGGHGPDRSRKEGDDDR
                     R"
     gene            2182..2841
                     /locus_tag="VKX24_01985"
     CDS             2182..2841
                     /locus_tag="VKX24_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020520375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07279.1"
                     /translation="MTDGDIRVFVVDDHRLFLSGVEAEIGHDFTLVGSAGDVPSAIAA
                     ILATRPDVVLLDVHMPGGGGRAVLEAVHPSAPEVHFLALSVSDAPEDVIAVIRAGARG
                     YVTKSISPADLTGAIRRVRDGDAVFSPRLAGFVLDAFAGGPAGAEVAGTPDPELDQLT
                     PREREVLRLIARGYAYKQVARNLGISIKTVETHVSAVLRKLQLSSRYQLTRWATERRL
                     I"
     gene            complement(2851..3897)
                     /locus_tag="VKX24_01990"
     CDS             complement(2851..3897)
                     /locus_tag="VKX24_01990"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HLJ07280.1"
                     /translation="MATGYELWQEPVVGGIADPAIFNLSGLDQIRSWDDGLIPVPPFA
                     RLTGLRIAGAGEGTSSFTMPAHGWLVNPTGAYSIGVLAVFADPPLGCAIQTTLPPATP
                     YTTAEMSITALRPVRPTDGVLVGNGTVIHAGGRMALSEVSIVDGTGRLLAHGTCRCMT
                     LPRLEPLPPVEGLQPVVEPDDAGDPWRRPVAGAPVPQEVWDAEDGLTVCRQLIEGQLP
                     RPPISHLTGLVLTEATPGETTFALPATGWLASPSGNVEGGMVALVADAALQTAILTVA
                     PAGCAVASVDLKVNFLRPCPPDGRDLIARGKVVHQGRSIVIAEAEVLNGDGKRVAVAT
                     GSALLQPGRPAALD"
BASE COUNT          515 a         1557 c         1514 g          591 t
ORIGIN      
        1 acgcccatct ggcaggcggc ccgcaccaga cgcatcaccg catccccgct ctccgggtcg
       61 accgcacccg aagcctcgtc ggccaggagc aggcggcgct cccccacgat cgcccgggcg
      121 atcgccaccc gctggcgctc gccgccggtg agttcgtcgg gataccgtcc ggcccgctcg
      181 ccgaggccga gcgcctccag caccgccagc ccggccatcc gggcgctgcg ggcggcgacg
      241 ccgtcgagct ccatcggcaa cgccacattc tcggcggcgg tcaggccggg cagcaggttg
      301 tcgtcctgga agacgtagcc gatcgagcgg cgcctgaggc gtgcccgggc ctccctcgac
      361 atcgccgaca cctcggcacc ctcgatgatc acctcgccgc tgctcggctc ctcgagggtg
      421 ccggcgatcg ccagcagggt gctcttgccc gagccgcacg ggcccatcag cgccaacagt
      481 cccccggcct cgacggagag cgagatgccg cggacggccc ggacctcgcc cggtccggcg
      541 ccgtagctct tcgtgatctg ccgcagctcc aggatgttca tcgccacccc cggttcccct
      601 gcatcgccgc ctccctcgcc tgatcggtat ccgtctggga tgtcccgatc gatcgtccgc
      661 ctgctggctt gccggcacca tcggggatcc ccctgaacca tccccgaagc ccgcaccggg
      721 gtcggtccgg gggatgctcc ggatgggttg gcggagctgc tcgtgcgaac atggcggtgg
      781 gaggaggttc ctcccgatca ccctcgactt ggcgacgctg ggtagccgga gacacgccct
      841 tggatgaggc ccacacgcac cccggcccgt tgccggcggc cgaaccccac gaccgcgcgg
      901 ggacgccggc cgggcttgcc gcgctgcgca tcaggcaggt gcgccgcagt gcccagcgcc
      961 gggtggtcgc cggggtcgcc ggggggctcg ccgagcagct ccgcgtcgac ccgacgatcc
     1021 tgcgcctcgg cttcgtcctg ctcggtctgt gcggcggcgc cggagcggtc atctacgccg
     1081 tcctgtgggc caccctgccg gcggaggacc catcgcgccc ggcggcgccg ctggatgccg
     1141 gcgtccagcg tgggttggcc gtcgccctga tcatcggtgg gttcgtcctc ctgctggtgg
     1201 cgggaggcct gtggttcgga ccggtcgtca cctggtcggt cgccctggtt tcgctcggcg
     1261 tcaccgtcgt ctggctgcgc ggcaacgaca ccgaccgcgc ccgctggagc cgcaaggccc
     1321 ggggggcgcc gtccagcgcc ctcgacgccc tcgccgggaa gccgatcggg cggttccgcc
     1381 tcgccctcgg cgccatgctg gtcctgctcg gcctcctggt gttcctcacc ggtacgcacc
     1441 tcctgcaggc ccacggctcg gtcgtcgtcg ccgtgctgat cactgccggc ggggcgatgc
     1501 tcatcgccgg gccctggggc tggcgtctcg tcacggctct cggcagcgag cgccgcgagc
     1561 gcatccgctc cgaggagcgg gccgagatgg ccgcccacct ccacgactcg gtcctccaga
     1621 ccctcgccct gatccagcgc agcgaccagc cccgggagat ggtcgccctg gcccgcagcc
     1681 aggagcggga gctgcgcgcc tggctgatgg ggcgggagcc gacggttgcc gacgggagcc
     1741 ggcctgcggc gaccgtcgcc caggcggtcg agaaggtcgg ggcgaccgtc gagctgcagt
     1801 tcaaggtgcc cgtcgaggtg gtgaccgtcg gcgacgcccc actcgacgac cggctccagg
     1861 cgatcgtcga cgccacccgt gagggtctgg tcaacgcggc gaagcactcc ggggccgacc
     1921 agatctcgct ctacgtcgag gtcgagccgc acgcggtcac cgccttcgtc cgcgaccagg
     1981 gctgcggttt cgacccggag tcggcggcac cggaccgccg cggcatcgcc cagtcgatcc
     2041 gcgggcggat gcagcgcgcc ggtggtacgg cgtcggtcgt cagcgaaccc ggtgggggca
     2101 ccgaggtcca gctcgtcctc ccccggatcg tggcgcgaca aggcgggcat ggccccgacc
     2161 gatcccggaa ggagggcgac gatgaccgac ggtgacatcc gggtgttcgt ggtcgacgac
     2221 caccggctct tcctctccgg cgtcgaggcg gagatcggcc acgacttcac cctggtgggg
     2281 agcgccgggg acgtgccgtc ggcgatcgcc gccatcctcg ccacccggcc cgacgtcgtc
     2341 ctgctcgacg tccacatgcc cggcggcggc gggcgggcgg tgctcgaagc ggtccacccg
     2401 tcggcccccg aggtgcactt cctggcgctg agcgtgtccg acgcgccgga ggatgtgatc
     2461 gccgtcatcc gggccggggc gcgggggtac gtgacgaagt cgatctcgcc ggccgacctg
     2521 accggtgcca tccggcgggt gcgcgacggc gatgccgtgt tctccccccg tctggccggg
     2581 ttcgtgctcg acgccttcgc cggcgggccg gccggggccg aggtcgccgg gacacccgac
     2641 cccgagctcg accagctgac ccctcgcgag cgggaggtgc tgcggctgat cgcccgcggc
     2701 tatgcctaca agcaggtcgc ccggaacctc gggatctcga tcaagaccgt ggagacccac
     2761 gtctcggcgg tgctgcgcaa gctccagctg tcgagccgct accagctgac ccgctgggcg
     2821 accgagcgcc ggctgatctg acctcccggc tcagtcgagt gccgccggcc ggccgggctg
     2881 cagcagcgcc gagccggtcg ccaccgcgac gcgcttgccg tcgccgttga gcacctcggc
     2941 ttcggcgatc acgatgctgc ggccctggtg cacgaccttc ccccgggcga tcaggtcccg
     3001 cccgtcgggc gggcagggcc ggaggaagtt gaccttgagg tcgaccgacg cgacggcgca
     3061 gccggcggga gcgacggtga ggatggcggt ctgcagggcg gcgtcggcaa ccagggccac
     3121 catcccgccc tcgacattgc ccgacggtga ggcgagccag ccggtggccg gcagggcgaa
     3181 ggtggtctcg ccgggggtgg cctcggtcag caccagcccg gtcaggtggc tgatcggggg
     3241 ccgggggagc tgcccctcga tcagctggcg gcagacggtc agcccgtcct cggcgtccca
     3301 cacctcctgc gggacggggg cgccggcgac cggccgccgc cacgggtcgc cggcgtcgtc
     3361 cggctcgacg accggctgga ggccctccac cggcgggagc ggctccagcc gcggcagggt
     3421 catgcaccgg caggttccgt gggcgagcag gcgcccggtg ccgtcgacga tcgacacctc
     3481 cgacagcgcc atccgcccgc ccgcgtggat gacggtcccg ttgccgacga gcaccccgtc
     3541 ggtgggccgg accgggcgca gcgcggtgat cgacatctcc gcggtggtgt agggcgtcgc
     3601 cggggggagc gtcgtctgga tggcgcagcc gagcggcggg tcggcgaaga cggcgagaac
     3661 gccgatcgag taggcgccgg tcgggttgac cagccacccg tgggccggca tggtgaacga
     3721 ggaggtcccc tcccccgcac cggcgatccg gaggccggtg agccgggcga acggtggcac
     3781 cgggatcagc ccgtcgtccc aggagcggat ctggtcgagc ccgctcaggt tgaagatcgc
     3841 cgggtcggcg atcccgccga ccaccggctc ctgccacagc tcgtaccccg tcgccacccg
     3901 ggcatgatgc catggggcgc cgggcttcct ggcggcgggc cgcccgctac atcgtggccg
     3961 acgggtcgta ctcgaagatg ccgatcgagt tgccctcggt gtcccggaag gtggcgaagt
     4021 agcccatccc gggaaccagc atctttcctt gcgtcatggt tccgccgttg gcggtgatca
     4081 acgccgtggc gtcttagatc gaggcgacgc ccatcgtcag cctcgtctcc cggttggcct
     4141 cgtcgcgctg catcagtgca ccgtcgatgc ccggctg
//
LOCUS       DATGJT010000113         3026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_740694, whole genome shotgun sequence.
ACCESSION   DATGJT010000113 DATGJT010000000
VERSION     DATGJT010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3026
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_740694"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VKX24_01995"
     CDS             <1..671
                     /locus_tag="VKX24_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07281.1"
                     /translation="AGSSDDFIPYNITRTRADVYRNGDYDYEFVTWHGLAAEHLTMCN
                     DGLWSGLAGWLGRTARAVDPPRVTYVRNPLMDDPASGLVGDRAYWVSGIETRERALGT
                     IDVTSGGSGLAGGSGPVAATTENGSLAADGITLGTGYDRPDRHNALPVNPYTREYRHP
                     GPPAREPASDRLSITAANIRSITIDPRRAGVSCHAALDVRSDGPLSITLLGCGGAPQV
                     AGRS"
     gene            complement(668..1477)
                     /locus_tag="VKX24_02000"
     CDS             complement(668..1477)
                     /locus_tag="VKX24_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020639889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaX family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HLJ07282.1"
                     /translation="MKLRSIVFDLFGEYIRYDGGEIGLRGLVALLSPFGIAEDVVRVL
                     MARLRREGWFESSRVGRQSRYSLTEEGWKLLDTGRERIFERPPEPWPGQWCLAIYSVP
                     ESARASRDRLRKTLTWLGFGPLAASAWVSPHDRRAQVAEAWNGEPDGRLQLLMARSGG
                     LDEDREMAARCWDLDGLDRAYGEFLAVWEPKITAWHRQQPEGAAALVERTRLIHEYRM
                     FPFKDPGLPVELLPAGWQGRQARDLFLAGFGLLRDPAVTHYRQVVQATGDG"
     gene            1513..2457
                     /locus_tag="VKX24_02005"
     CDS             1513..2457
                     /locus_tag="VKX24_02005"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013491811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HLJ07283.1"
                     /translation="MRLGFSLPSAGSWATPENQVTVARRAEELGYASLWVFQRLLYPL
                     HPRNDYPSAPGQPWPAPFRSVVDPVVTLAHVGGATNRIRLGTATLIAVFVPPVVTAKQ
                     LATLDAVCGGRLDVGLSLGWSEEEYEACGVPFRERGARLDEYLQCLQALWGDDPAEFS
                     GRFYTVAPSEFRPKPHQRPRPPMLVGGYAPATVRRAAAYCDGYIGGNVPLARVAPLVD
                     ELRTAVSAAGRDPAAFRVVARGSVRLNDDPLPDDDRRPLWGSLDQVRADVARYREAGL
                     DELFFELNFDPAVGGVDADPKAAMDIALFLLEELAPGG"
     gene            2543..>3026
                     /locus_tag="VKX24_02010"
     CDS             2543..>3026
                     /locus_tag="VKX24_02010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07284.1"
                     /translation="MDVSRRLAVLGVAVLGLFCLAPVPATAAGPSPQGYWLAASDGSV
                     FPNGDAGNYGSAGGTHLAKPIVGMAATPTGKGYWLVASDGGIFGFGDAGFFGSAGATH
                     LAQPIVGMAASPTGKGYWLVASDGGVFGYGDAGFYGSKASGRKKKQIVGIMVSRGGHG
                     Y"
BASE COUNT          388 a         1096 c         1124 g          418 t
ORIGIN      
        1 gggcgggcag cagcgacgac ttcatcccct acaacatcac ccggacccgg gccgacgtgt
       61 accgcaacgg tgactacgac tacgagttcg tgacctggca cggcctggcc gccgagcacc
      121 tgacgatgtg caacgacggc ctctggtcgg ggctggccgg ctggctgggg aggacggccc
      181 gggccgtcga cccgccccgg gtgacctacg tccgcaaccc gctgatggac gaccccgcct
      241 ccggcctcgt cggcgaccgg gcctactggg tgtcggggat cgagacccgg gagagggcgc
      301 tgggcacgat cgacgtgacc tcgggcggct ccgggctcgc cggcggctcc ggaccggtgg
      361 cggccaccac cgagaacgga tccctggccg ccgacggcat cacgctgggg acgggctacg
      421 accggcccga ccggcacaac gccctgccgg tcaaccccta cacccgggag taccgccacc
      481 cggggccgcc ggctcgggag ccggcgagcg accggctctc gatcaccgcc gccaacatcc
      541 gctcgatcac gattgatccc cggcgggccg gggtgtcgtg ccacgccgcg ctcgacgtcc
      601 ggtcggacgg gccgctgtcg atcacgctgc tcggctgcgg cggtgcgccg caggtggccg
      661 gccggtccta gccgtcaccg gtcgcctgca cgacctggcg gtagtgcgtc accgccgggt
      721 cgcgcaggag gccgaacccg gccaggaaca ggtcgcgggc ctggcggccc tgccagccgg
      781 cggggagcag ctcgaccggc aggccgggat ccttgaacgg gaacatccgg tactcgtgga
      841 tgagccgggt gcgctccacc aacgccgccg cgccctccgg ctgctggcgg tgccaggcgg
      901 tgatcttcgg ctcccacacg gccaggaact cgccgtaggc ccggtcgagg ccgtcgaggt
      961 cccagcagcg ggcggccatc tcccggtctt cgtcgaggcc gccggagcgc gccatcagca
     1021 gctggaggcg cccgtcgggt tcgccgttcc aggcttcggc gacctgggcc cggcggtcgt
     1081 ggggggagac ccacgccgag gccgccagcg gcccgaaccc cagccaggtc aaggtcttcc
     1141 ggagacggtc gcggctggcc cgggcggact ccggcacgct gtagatggcc aggcaccact
     1201 gaccgggcca tggctccggc gggcgttcga agatccgctc ccggccggtg tcgagcagct
     1261 tccagccttc ctcggtcagc gagtagcggc tctggcggcc gacccggctc gactcgaacc
     1321 agccctcccg ccggagtcgg gccatgagga cgcgcacgac gtcctcggcg atgccgaacg
     1381 gtgagaggag cgccacgagg ccccgcagcc cgatctcccc gccgtcgtag cggatgtact
     1441 cgccgaagag atcgaacacg atcgaccgca gcttcaccgc cttcagccta cggcttggct
     1501 acggtggcgc cgatgcgact cgggttctcg cttccctcgg ccggctcgtg ggccacgccc
     1561 gagaaccagg tgacggtggc ccgccgggcc gaggagctgg gctacgcctc gctgtgggtc
     1621 ttccagcggc tgctctatcc gctgcacccc cgcaacgact acccgtcggc gcccgggcag
     1681 ccatggccgg cgccgttccg atcggtggtc gacccggtgg tgacgctggc ccacgtcggc
     1741 ggcgccacca accggatccg gctggggacg gcgacgctga tcgccgtctt cgtccctccg
     1801 gtggtgacag ccaagcagct ggccacgctc gacgccgtct gcggcggccg cctcgacgtc
     1861 ggcctgagcc tcggctggtc ggaagaggag tacgaggcct gcggcgttcc cttccgggag
     1921 cggggcgccc ggctcgacga gtacctgcag tgcctgcagg ccctgtgggg cgacgacccg
     1981 gccgagttct ccggccgctt ctacaccgtt gcgccgtcgg agttccggcc caagccgcac
     2041 cagcgtcccc gtccgccgat gctggtcggc gggtacgccc cggccaccgt ccgccgggcg
     2101 gcggcgtact gcgacgggta catcggcggc aacgtcccgc tggcccgggt ggcgccgctg
     2161 gtcgacgagc tgcggacggc ggtgtcggcc gccgggcggg acccggcggc gttccgggtc
     2221 gtggcccggg gatcggtgcg gctcaatgac gatccgctgc ccgacgacga ccggcgtccg
     2281 ctgtggggtt cgctggacca ggtccgggcc gacgtcgccc gctaccggga ggccggcctc
     2341 gacgagctgt tcttcgagct caacttcgac cccgccgttg gcggcgtcga cgccgatccc
     2401 aaggcggcga tggacattgc gctgttcctg ctggaggagc tggcccccgg cggctgaggg
     2461 cgggggcggt ggggtccact ccggcgccgc ggccagcatg tacaacattc ccgacccgat
     2521 ggtgtgtcga gaggatcgga cgatggacgt atcccggcgg ctggcggtgc tcggcgtggc
     2581 cgtcctgggc ctgttctgcc tggcgccggt gccggccacg gcggccggcc cgtcgccgca
     2641 gggctactgg ctggcggcgt cggacggcag cgtcttcccc aacggcgacg ccggcaacta
     2701 cggctcggcg ggcgggacgc acctggccaa gccgatcgtg ggcatggcgg ccacgccgac
     2761 cggcaagggc tactggctgg tggcgtcgga cggcggcatc ttcggcttcg gcgatgccgg
     2821 gttcttcggt tcggccgggg cgacgcatct ggcccagccg atcgtgggca tggccgcctc
     2881 gccgacgggg aagggctact ggctggtggc gtcggacggc ggcgtcttcg gctacggcga
     2941 cgccgggttc tacggctcga aggccagcgg ccggaagaag aagcagattg tgggcatcat
     3001 ggtcagccga ggcgggcacg gctact
//
LOCUS       DATGJT010000114         2992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_118591, whole genome shotgun sequence.
ACCESSION   DATGJT010000114 DATGJT010000000
VERSION     DATGJT010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118591"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VKX24_02015"
     CDS             complement(<1..392)
                     /locus_tag="VKX24_02015"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HLJ07285.1"
                     /translation="MSEARSYSDEERIELQRQCVNEHVGLENSHVGVERVLKETFAEE
                     GVFYDVAPGVVHFEGLEGVAGFYDMLFSVLPDIEIKMTHEYDVPGCCVREGIVTGTHS
                     AEFAGVPASGNRVGFPFAAMYLFGDDPT"
     gene            complement(493..1650)
                     /locus_tag="VKX24_02020"
     CDS             complement(493..1650)
                     /locus_tag="VKX24_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013392369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HLJ07286.1"
                     /translation="MPGPLTGFRVIELGGIGPAPFCGMVLSDMGADVVRVDRAAAVAA
                     DGAPQGVDVLSAGILSRGRRSVAINLKHPDGLATALTLTDQADAVIEGFRPGVVERLG
                     IGPDVCLARNPRLVYGRITGWGQGGPLAQAAGHDLNYLALAGGLAPIGRRDSPPCPPL
                     NLVADFGGGGLLLATGVLAGLLEAGRSGQGQVVDAAMLDGAAYLMTMMFELLGRGAWV
                     EERESNANDGGAPFYAVYETADGEYVAIGAMEPQFYRLLLDRLDLEENDLPEQWDRTQ
                     WPATKQRLAEVFRQRTQKEWCELLEGSDACFSPVLRMSEAPQHPHNVARRSFEVVDGV
                     VQPAPAPRFTRTPSGVAGGAPGPGEHTDSVLAAYGLTPARVAELRRSGAVA"
     gene            complement(1683..2447)
                     /locus_tag="VKX24_02025"
     CDS             complement(1683..2447)
                     /locus_tag="VKX24_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011604937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HLJ07287.1"
                     /translation="MSDKVLVEIDGGLITITINRPEMRNAVDRDVSYGVCAAVDELDH
                     RADLRVGILTGAGGTFCSGMDLGAFLRGEVTRVKGRGILGIALTPPQKPLIAAVEGYA
                     LAGGFEAVLACDLVVAARDAQFGLPEARRGLAAAAGGLIRLPRLIPPRIAMEIALTGA
                     PVSAERMAAYGLVNRLVEPGEALAAAKDLANQIIANAPLSVAASKRVILEQRDWTTEE
                     SFARQEQITGHLLGSADAKEGAAAFKEKRLPVWKGE"
     gene            complement(2462..>2992)
                     /locus_tag="VKX24_02030"
     CDS             complement(2462..>2992)
                     /locus_tag="VKX24_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003060811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HLJ07288.1"
                     /translation="EAGGHTGEIATLVLVPQVVEAAGDRAAVLAAGGIFHGSQIAAAL
                     AMGAQGVWCGTIWLGTRESELDAFQKECIFETPSEGTVRSKVRTGKTVRMRRSRMSDA
                     WEQPDAPGYLPTPLQGVLYNEAQARIVRSRRKELFSFPVGQSVGAVTSETTVRDVMYN
                     LQVEYGEALDRLAKLM"
BASE COUNT          452 a         1074 c         1017 g          449 t
ORIGIN      
        1 ttcgtcgggt cgtcgccgaa gaggtacatg gcggcgaagg ggaaccccac cctgttgccc
       61 gaagcgggca cgccggcgaa ctcggccgag tgggtcccgg tcacgattcc ttcccggacg
      121 caacagcccg gcacgtcgta ctcgtgagtc atcttgatct cgatgtcggg caggacgctg
      181 aagagcatgt cgtagaagcc ggcgacgcct tccagaccct cgaagtgcac gacacccggc
      241 gcgacgtcgt agaacacgcc ctcctcggca aacgtttcct tgagcacccg ctcaacgccg
      301 acgtgggagt tctcgagccc gacgtgctcg ttcacgcact ggcgctgcag ttcgatccgc
      361 tcctcgtcgc tatagctcct ggcttcgctc acggccatgg tccctccggt acttttcgaa
      421 aactcgaata catttcctta atttcgatat tcaatcaggg gacaagcccg gcgtcaaccc
      481 cccaaccagg ggttatgcga ccgcaccgct ccggcggagc tcggcgacgc gggcgggggt
      541 caagccatag gcggcgagca ccgaatcggt gtgctcgccg gggccggggg cgcccccggc
      601 cactccgctc ggcgtacggg tgaaacgggg ggccggggcc ggctggacga cgccgtctac
      661 gacctcgaag ctccgccggg cgacattgtg gggatgctgc ggggcttcac tcatccgcag
      721 caccggcgag aagcaggcgt ccgacccttc gagcagctcg caccactcct tctgcgtgcg
      781 ctgacggaag acctcggcca gccgttgctt cgtcgccggc cactgtgtcc ggtcccattg
      841 ctcgggaagg tcgttctcct ccaggtcgag gcggtcgagc agcagccggt agaactgcgg
      901 ctccatggcg ccgatcgcca cgtactcccc atcggccgtc tcgtagacgg catagaacgg
      961 ggcgcctccg tcgttggcgt tcgactcccg ctcttcgacc cacgcccccc gccccagcag
     1021 ctcgaacatc atcgtcatga ggtacgccgc gccgtcgagc atggcggcgt cgacgacctg
     1081 gccctgcccc gaccggcccg cttcgaggag accggccagg acaccggtgg cgagcagcag
     1141 tccgccaccg ccgaagtcgg cgacgaggtt gagcggcggg cagggcgggc tgtcccgccg
     1201 cccgatcggc gccagcccac cggccagcgc cagatagttc aggtcgtggc ccgccgcctg
     1261 ggccagcggc ccgccctggc cccagccggt gatgcggccg tagacgaggc gggggtttcg
     1321 ggcgaggcag acgtcggggc cgatcccgag tcgctcgacg acgccgggac ggaacccctc
     1381 gatgacggcg tcggcctgat cggtcagggt gagggcggtg gcgagcccgt ccggatgctt
     1441 gaggttgatg gccacggacc ggcggccacg cgacaggatc ccggcgctca gcacatcaac
     1501 gccctgcggc gcgccgtcag cggccacggc ggcggcccgg tcgacccgga ccacgtcggc
     1561 gcccatgtcg gagagcacca tgccgcagaa cggggccggg ccgatccctc cgagttcgat
     1621 gaccctgaag ccagtcaagg gaccgggcaa cgcttcctcc tagctcgtgg ccgacctggc
     1681 cgtcactccc ccttccaaac ggggagccgc ttctccttga aggccgccgc cccctccttg
     1741 gcgtcggcgg agcccagcag gtggccggtg atctgctcct ggcgggcgaa gctctcctca
     1801 gtcgtccagt cccgctgctc gaggatcacc cgcttgctgg ctgccaccga cagcggcgcg
     1861 ttggcgatga tctggttggc caggtccttg gccgcggcca gcgcctctcc gggttcgacg
     1921 agccggttga ccagcccgta cgccgccatc cgttcggcgc tgaccggggc gccggtgagg
     1981 gcgatctcca tggcgatacg gggcgggatc agccggggga ggcggatgag cccaccggcg
     2041 gcggcggcga ggcctcgccg ggcctcggga aggccaaact gggcgtcacg ggccgccacg
     2101 accaggtcgc aggccagcac cgcctcgaac ccaccggcca gggcgtagcc ctccaccgcg
     2161 gcgatgagcg gcttctgggg cggcgtgaga gcgatcccga ggatgccccg ccccttcaca
     2221 cgggtcacct cgccccgcag gaaggcaccc agatccattc cggaacagaa cgtgccgccg
     2281 gcaccggtga ggatgccgac ccggaggtcg gcgcggtggt cgagctcgtc gaccgccgcg
     2341 cacacgccat aggagacgtc gcggtcgaca gcgttgcgca tctccggacg gttgatcgtg
     2401 atcgtgatga gcccaccgtc gatctcgacg agcaccttgt ccgacatggc ccggcgaccg
     2461 gctacatcaa cttggcgagc cggtccagcg cctcgccgta ttcgacctgg aggttgtaca
     2521 tcacgtcgcg aaccgtcgtc tcgctcgtca cggccccgac cgactggccg acggggaagg
     2581 agaagagctc cttccgccgg gaccggacga tccgggcctg ggcctcgttg tagagcactc
     2641 cctggagggg ggtcggaaga tagccggggg cgtcgggctg ttcccaggcg tcggacatcc
     2701 tgctccgccg catacggacc gtcttcccgg tccggacctt gctccgtacg gtgccttcgc
     2761 tcggcgtctc gaagatgcat tccttctgaa aggcgtcgag ctcgctctcc cgggtgccga
     2821 gccagatcgt gccgcaccag acaccctggg cccccatggc caacgcggcg gcgatctggc
     2881 tgccgtggaa gatgccgccg gcggcgagga cggccgcccg gtcgcccgcc gcctccacga
     2941 cctggggcac gaggacgagg gtggcgatct cgcccgtgtg gccgccggcc tc
//
LOCUS       DATGJT010000115         2540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_222696, whole genome shotgun sequence.
ACCESSION   DATGJT010000115 DATGJT010000000
VERSION     DATGJT010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222696"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VKX24_02035"
     CDS             <1..475
                     /locus_tag="VKX24_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014687716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HLJ07289.1"
                     /translation="LDCDYLSFVSGIDWMPAPRVGGDDAGGDTSSPVQPTEMTFGVGG
                     SDGRFQVFARVQSTSRRHGLTFKVDVDEEAPTLSSWVPVYPGADWHERETWEMFGIGF
                     DGHPGMRHLYLPAEFEGHPLRKDFPLLSREIKPWPGLVDVEPMPGEEVTQEVIPE"
     gene            472..1638
                     /locus_tag="VKX24_02040"
     CDS             472..1638
                     /locus_tag="VKX24_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D 1"
                     /protein_id="HLJ07290.1"
                     /translation="MTLDFRTEAMMQKHLADARINVELETEGMVLNIGPQHPATHGTL
                     RVVVKLDGERVVSADPVIGYMHRGYEKLTEFRTYPQITTLINRIDWLSSFANEVPFIH
                     AAEQLMGVEAPPRAQYIRTILTELSRIATFVLFLGEMGLQVGAITPAFYGFRDREHVL
                     NLIEAATGGRFHPNFNRIGGLKVDLPSGWIAECRRVMKKIFDSVDEFEELVAGNEIFE
                     VRCRGVGVIPPAVGAEYGVSGSNLRASGVDWDLRRDGPGYLVYDDLDWKVWTHPDGDS
                     FARYWVRMQETRESARMVVQMLDRLPAGPVMAKVPRIIKVPEGEVWVNTENPLGEMGY
                     YLISKGATGPFRCKIRSASFSNVSILPWLLKGVYVPDIITILASLYFILGDIDR"
     gene            1641..>2540
                     /locus_tag="VKX24_02045"
     CDS             1641..>2540
                     /locus_tag="VKX24_02045"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HLJ07291.1"
                     /translation="MPAALPLALDVPWGWIVAIKTVIVLAIIPAGALILGYVFLLKMM
                     SHMQSRLGPMDPGGFHGWFQLIGDGIKFIQKEDIFPDQADRKVFAAAPVVVLISTFLL
                     YIVVPAGPRLVVSDLNMGVFYALAVSSLSVIGILMAGWGSANKYALLGALRAAAQLIA
                     YELPLVLAVVGVVIQAGSMSLQDIVHFQQSGSLFGWSGLGFPLILTQFLGFGIFLIAA
                     QAELTQTPFDMPVAESELVAGYMVEYTGFRFLFFFMGEFGTAFAFAGIAATLFLGGWS
                     VPWVHGGAADILGPFVLFAKVMLV"
BASE COUNT          366 a          908 c          824 g          442 t
ORIGIN      
        1 gctcgactgc gactacctct cgttcgtctc cgggatcgac tggatgccgg ccccccgggt
       61 gggcggcgac gacgccggcg gcgacaccag ctcgcccgtc cagccgacgg aaatgacctt
      121 cggggtcggc gggtcggacg ggcgcttcca ggtgttcgcc cgggtgcagt cgaccagccg
      181 ccggcacggc ctcacgttca aggtcgacgt cgacgaggag gcccccacgc tctcctcctg
      241 ggtgcccgtc tatcccgggg ccgactggca cgaacgggag acgtgggaga tgttcggcat
      301 cggcttcgac gggcaccccg ggatgcgcca cctctatctc ccggcggagt tcgagggcca
      361 tcccctccgg aaggacttcc cgctcctgtc ccgggagatc aagccctggc cgggcctcgt
      421 cgacgtcgag ccgatgcccg gcgaggaagt gacccaggag gtcatcccgg aatgaccctc
      481 gacttccgca ccgaagccat gatgcagaag catctggccg acgcccgcat caacgtcgag
      541 ctcgagaccg agggcatggt cctcaacatc gggccccagc accccgccac ccacggcacc
      601 ctccgggtgg tggtgaagct cgacggcgag cgggtcgtct ccgccgaccc cgtcatcggc
      661 tacatgcacc ggggctacga gaagctgacc gagttccgga catatccgca gatcacgacc
      721 ctgatcaacc ggatcgactg gctctcgagc ttcgccaacg aggtgccgtt catccacgcc
      781 gccgagcagc tgatgggcgt ggaggccccg ccccgggccc agtacatccg gacgatcctc
      841 accgagctct cccgcatcgc caccttcgtg ctgttcctcg gcgagatggg cctccaggtc
      901 ggggccatca cccccgcctt ctacgggttc cgggatcggg agcacgtcct caacctcatc
      961 gaggcggcca ccggcgggcg gttccacccc aacttcaacc ggatcggcgg cctcaaggtc
     1021 gacctgccct cgggctggat cgccgagtgc cgccgggtga tgaagaagat cttcgactcc
     1081 gtcgacgagt tcgaggagct cgtggccggc aacgagatct tcgaggtccg ctgccggggc
     1141 gtcggggtca tcccgccggc cgtcggcgcc gagtacggcg tgtcgggctc gaacctccgg
     1201 gcctcgggcg tcgactggga cctccgccgg gacgggccgg gctacctcgt ctacgacgac
     1261 ctcgactgga aggtgtggac ccaccccgac ggcgactcct tcgcccgcta ctgggtccgg
     1321 atgcaggaga cgcgggagtc ggcgcggatg gtggtccaga tgctggaccg gctgcccgcc
     1381 ggcccggtca tggccaaggt cccccgcatc atcaaggtcc ccgagggcga ggtctgggtc
     1441 aacacggaga acccgctggg ggagatgggc tactacctga tctccaaggg ggcgaccggg
     1501 ccgttccggt gcaagatccg ctcggccagc ttctccaacg tgtcgatcct cccttggctg
     1561 ctcaagggtg tgtacgttcc ggacatcatc acgatcctcg ccagcctgta cttcatcctc
     1621 ggggacatcg accggtgacg atgcccgccg cgctcccgtt ggccctcgac gtcccctggg
     1681 gctggatcgt ggccatcaag acggtgatcg tgctggccat catcccggcc ggggcgctga
     1741 tcctgggcta cgtcttcctg ctcaagatga tgagccacat gcagagccgg ctcgggccga
     1801 tggaccccgg cgggttccac ggctggttcc agctgatcgg cgacggcatc aagttcatcc
     1861 agaaagagga catcttcccc gaccaggccg accggaaggt gttcgccgcc gctcccgtcg
     1921 tcgtgctcat ctcgacgttc ctgctctaca tcgtcgtgcc ggccgggccc cggctcgtcg
     1981 tctcggacct caacatgggg gtcttctacg ccctggccgt gtcgtcgctc tcggtgatcg
     2041 gcatcctcat ggccgggtgg gggagcgcca acaagtacgc cctgctcggg gcgctgcggg
     2101 ccgccgccca gctcatcgcc tacgagctgc cgctggtgct ggccgtcgtc ggcgtcgtca
     2161 tccaggccgg ctccatgagc ctccaggaca tcgtccactt ccagcagagc ggcagcctct
     2221 tcggctggag cggcctcggg ttcccgctga tcctcaccca gttcctcggc ttcgggatct
     2281 tcctcatcgc cgcccaggcc gagctgacgc agacgccctt cgacatgccg gtggcggaga
     2341 gcgagctcgt ggccggctac atggtggagt acaccgggtt tcggttcctg ttcttcttca
     2401 tgggcgagtt cgggaccgcc ttcgcctttg ccggtatcgc cgccaccctg ttcctgggcg
     2461 gctggtcggt gccgtgggtc cacggcggcg ccgccgacat cctcggcccg ttcgtgctct
     2521 tcgccaaggt gatgctcgtc
//
LOCUS       DATGJT010000116         2820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_327000, whole genome shotgun sequence.
ACCESSION   DATGJT010000116 DATGJT010000000
VERSION     DATGJT010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327000"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VKX24_02050"
     CDS             complement(<1..693)
                     /locus_tag="VKX24_02050"
                     /inference="COORDINATES: protein motif:HMM:NF013197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07292.1"
                     /translation="MGFEEDPIPRTVEWRDGAVRLIDQRRLPGRLAFIDCRTVAELCE
                     AISSLAVRGAPALGAAGGYGIALACRLAVVGGSGGGRGDPAPPAGGWGDPAPAAAGRP
                     APAAAVARAAGEAARQLVATRPTAVNLAWGVRQVLATVEAAVAAGSTAEDVGRVALEE
                     ADRLAEQDVTDNRALGRHGSGLVPHGARVLTHCNAGALACVGYGTALGVIRAAAEAGK
                     APRVWVDETRPVL"
     gene            complement(765..1940)
                     /locus_tag="VKX24_02055"
     CDS             complement(765..1940)
                     /locus_tag="VKX24_02055"
                     /inference="COORDINATES: protein motif:HMM:NF012246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016984 - ribulose-bisphosphate
                     carboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RuBisCO large subunit C-terminal-like
                     domain-containing protein"
                     /protein_id="HLJ07293.1"
                     /translation="MRDISPRRHHLVATFELEPDGSARALAVEESTGTEEPAGAMFAD
                     VGGTVLEEGGGRAVIAWPWRNWGPNLPQLMASVLVGEGCETARFTRCRLVALEWPDEL
                     VAAVGGGPRFGLEGVRRRLGVAAGRPLLGGIVKPSLGLSPAEVAATAAALARGGCHFI
                     KDDELLADPEWCPLLERTRRVAEALASVGRPVMYAANVSGPVDTLLDRAAAAVAAGAG
                     AIMVNAFATGIDAVRAVAAAGLGVPVLAHRVGAGPIARNPEVGVDGSVLCELTRIAGA
                     DLVQIGGFGGKLFDTPEEVARNLAACRRPLGGAKVPVPVNGGGVWAGSTPAVLAAAGC
                     DVMLLLGMGAYEHPGGPEAGARSVAEAIDAVLAGESLEAAAHSAPDLAAALAHFGGR"
     gene            complement(1960..>2820)
                     /locus_tag="VKX24_02060"
     CDS             complement(1960..>2820)
                     /locus_tag="VKX24_02060"
                     /inference="COORDINATES: protein motif:HMM:NF021916.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HLJ07294.1"
                     /translation="GSYDLAVPVTVLKQYRVPRFVGPGTLFFAMSYSGGTEETLEATS
                     AALAAGAQVVAVSSGGELARLASGAGAPVFGCPPGFMPRAALGHLATPLFAVCDRLGL
                     LPGGEAVVKAAQTQAARRRDACRPAVEGPANPARELARRIGRTFPLIWGTGALGAVAA
                     YRWRVDINENAKAPAFSNAFPEVDHNEICAFGQHGDVTRQVVTLVELRHDHEHGQLGR
                     RVDATRAIVEEAVASVLSVRAEGDGRLAQLVDLMYLGDWVSLYLAFDAGVDPGPIDAI
                     ARLKAEMART"
BASE COUNT          365 a         1140 c         1021 g          294 t
ORIGIN      
        1 gaggaccggc cgggtctcgt cgacccacac ccggggcgcc ttgccggcct cggcggcggc
       61 ccggatcacg ccgagggcgg tgccgtagcc gacgcaggcc agcgccccgg cgttgcagtg
      121 ggtcagcacc cgggcgccat gggggacgag cccggagcca tggcggccca gggcccggtt
      181 gtcggtcacg tcctgctcgg ccagccggtc ggcctcctcc agcgccaccc ggccgacgtc
      241 ctcggcagtg gagccggcgg cgacggcggc ctcgacggtg gcgagaacct gccgcacccc
      301 ccaggccagg ttgacggcgg tcggccgggt ggcgacgagc tgccgggccg cctcgcccgc
      361 cgcccgcgcc accgctgccg ccggggccgg tcgtccagcg gccgccggcg ccgggtcccc
      421 ccatccaccg gcgggcggcg ccgggtcccc tcgtccgccg ccggacccgc cgacgacggc
      481 cagccggcag gcgagggcga tgccgtagcc gccggccgcc cccagtgccg gcgccccccg
      541 gacggctagg gaagagatgg cctcgcacag ctccgcgacc gtccggcagt cgatgaaggc
      601 cagccggccg ggcagccggc gctggtcgat cagccggacg gcgccgtccc gccactcgac
      661 cgtcctcgga atcggatcct cctcgaaccc caccgccgca ttctggcgtt cgtccgccgg
      721 aatacagcgg aaacggaacg ccggttcgaa cgggggaccg ggcgttagcg gccgccgaag
      781 tgggccaggg cggcggcaag atcgggggcg gagtgggcgg cggcctcgag ggactcgccg
      841 gccaggacgg cgtcgatcgc ctcggccacg ctgcgggcgc cggcctcggg accgccgggg
      901 tgctcgtagg cgcccatgcc gagcagcagc atgacgtcgc agcccgccgc ggccagcacc
      961 gccggcgtcg acccggccca cacgccgccg ccgttgaccg ggaccggcac cttggccccg
     1021 cccagcggac gccggcaggc ggccaggttc cgggccacct cctccggcgt gtcgaagagc
     1081 ttccccccga agccgccgat ctggacgagg tcggcgccgg cgatccgggt cagctcgcac
     1141 aggacggacc cgtcgacgcc gacctcggga ttccgggcga tcggcccggc cccgacccgg
     1201 tgggcgagga ccggcacgcc gagccccgcc gccgccaccg cccgcacggc gtcgatgccg
     1261 gtggcgaagg cgttgaccat gatcgctccc gctccggcgg ccaccgccgc cgccgcccgg
     1321 tcgaggagcg tgtcgacggg ccccgacacg ttggcggcgt acatcaccgg ccgccccacc
     1381 gaggccagcg cctccgccac ccgccgggtc cgctccagca gcggacacca ctccgggtcg
     1441 gccaggagct cgtcgtcctt gatgaagtgg cacccgcccc gggccagcgc cgccgccgtc
     1501 gccgccacct cggccgggga gagtccgagc gacggcttca cgatcccgcc cagcaacggc
     1561 cggcccgccg ccacccccag ccggcgacgc acgccctcga gcccgaaccg gggcccgccg
     1621 cccaccgccg ccacgagctc gtcgggccac tccagggcca ccagccggca gcgggtgaag
     1681 cgggccgtct cgcagccctc gccgaccagc accgaggcca tcagctgcgg gaggttcggc
     1741 ccccagttgc gccacggcca ggcgatcacc gcccgtccgc cgccctcctc cagcaccgtg
     1801 ccgccgacgt cggcgaacat cgcgccagcc ggttcttcgg tcccggtcga ctcctccacc
     1861 gccagcgccc gggccgaacc gtccggctcc agctcgaagg tggcgacgag atggtgacgg
     1921 cggggggaga tgtcccgcac ttggccaccc atagtgtcgt caggtcctgg ccatctcggc
     1981 cttcagccgg gcgatggcgt cgatggggcc ggggtcgacg ccggcgtcga aggccaggta
     2041 caggcttacc cagtcgccca ggtacatcag gtccacgagc tgggcgaggc gcccgtcgcc
     2101 ctcggcccgg accgacagca ccgaggccac ggcctcctcc acgatggccc gcgtggcgtc
     2161 cacccgccgg ccgagctggc cgtgctcgtg gtcgtggcgg agctccacca gcgtcacgac
     2221 ctggcgggtg acgtcgccgt gctggccgaa ggcgcagatc tcgttgtgat ccacctccgg
     2281 gaaggcgttg gagaaggcgg gcgccttggc gttctcgttg atgtccaccc gccaccggta
     2341 ggcggccacg gcgccgaggg cgcccgtccc ccagatgagc gggaacgtcc gcccgatccg
     2401 gcgggccagc tcccgggccg ggttggccgg gccctccacc gccggccggc aggcgtcgcg
     2461 acggcgggcg gcctgcgtct gggccgcctt caccaccgct tccccgccgg gcagcagccc
     2521 gaggcggtcg cacacggcga agagcggcgt ggccagatgg ccgagcgccg cccggggcat
     2581 gaatcccggc gggcagccga ataccggcgc cccggcgccg gacgccaggc gggccagctc
     2641 accgccggag gagacggcga cgacctgcgc cccggcggcc agcgccgccg acgtcgcctc
     2701 cagagtctcc tccgtcccgc cggagtacga catggcgaag aacagcgttc ccgggccgac
     2761 gaagcggggg acccggtact gcttcagcac cgtcaccggc acggcgaggt cgtaggaccc
//
LOCUS       DATGJT010000117         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_429494, whole genome shotgun sequence.
ACCESSION   DATGJT010000117 DATGJT010000000
VERSION     DATGJT010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429494"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..674)
                     /locus_tag="VKX24_02065"
     CDS             complement(<1..674)
                     /locus_tag="VKX24_02065"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HLJ07295.1"
                     /translation="MIRWGGGHRRRVALAAGTAVVVGLAALSSAWAFSGARGSPFPAG
                     ELPGSVVIADFNGDGHADLATANQKAGAGVSVLLGDGAADPGFTAAAGSPFPVAGTPY
                     MVATGDFNGDGKPDLAVSGQDSGNVSVLLGDGSGGFSAAPGSPFPVSGQPFALAVADV
                     NADGKADIVTVDYSPSGVSVLLGTGTGAFAKAGNSPFAQGIDLAGLAIGDVNGDGKPD
                     LVATSP"
     gene            843..>2192
                     /gene="uvrB"
                     /locus_tag="VKX24_02070"
     CDS             843..>2192
                     /gene="uvrB"
                     /locus_tag="VKX24_02070"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HLJ07296.1"
                     /translation="MPPFELVSDFAPAGDQPAAIESLCEGLEAGERYQTLLGITGSGK
                     SFTIAGVIARVQRPTLVLAPNKSLAAQLTSEFREFFPRNRVEYFVSYYDYYQPEAYLP
                     STDTYIEKDSSINDEIDRLRHSATSGLLSRRDVIIVASVSAIYGLGAPEEYAHQLLML
                     SVGEERDQRSILSKLVDMAYERNDLNFVRNKFRVRGDTIEVFPAYEERATRIQLFGDE
                     VERIVSVDPVTGEVVEDLERLCIFPASHYVVSKARMERAVAQIEEELKDRLAELEGAG
                     KLLEAQRLRMRTTYDLEMLREVGVCSGIENYSRHLDGRSAGQRPYTLLDYFPSDFLTI
                     IDESHVAVPQLHGQYEGDRSRKDTLVEHGFRLPSALDNRPLRFEEFVERVGQVVFMSA
                     TPSPYELEVSSRVVEQIVRPTGLMDPQVVVRPTKGQIDDLVAEIRGREEADERVLVTT
                     "
BASE COUNT          349 a          803 c          727 g          313 t
ORIGIN      
        1 tagggactgg tcgcgacaag gtcgggcttg ccgtcaccgt tgacgtcccc aatggccagc
       61 cccgccaggt cgatgccctg ggcgaatgga gagttgcccg cctttgcgaa ggcgccggtg
      121 ccggtgccga gcagcaccga gacgccggat gggctgtagt cgacggtgac gatgtcggcc
      181 ttgccgtcgg cgttcacgtc ggcgacggcc agcgcaaagg gctggccgct gacggggaac
      241 ggcgaaccgg gcgccgccga gaacccgccg ctgccgtccc ccaggagcac cgacacgttg
      301 ccggagtcct gaccggagac cgccaggtcg ggcttcccat cgccgttgaa gtccccggtc
      361 gccaccatgt acggggtgcc ggcaaccggg aacggcgatc cggccgccgc cgtgaacccc
      421 gggtcggcgg caccatctcc gagcagcacc gacaccccgg cgccggcctt ctgattggcg
      481 gtggccagat cggcatggcc gtcaccgttg aaatcggcga tgaccaccga gcccggaagc
      541 tcgccggcgg gaaagggcga acccctggcg ccgctgaacg cccaggcgct cgacagcgcc
      601 gcgagcccga ccaccaccgc cgtccccgcc gccagcgcca cgcgccgccg atggccgcct
      661 ccccaccgga tcatcctggg acctcctggc caccggggac gagcaacact atcggccgat
      721 caccgccctc gctcggtggc gagccgacgc ggttcgatcc gtcccgagca tcgagtgtgt
      781 cgcggccggg cccccgttcc gccccctcct taaccgtcac accccgccgt tacgatgcct
      841 ccatgccacc gttcgaactg gtgtccgact tcgccccggc gggtgaccag ccggcggcca
      901 tcgagtcgct ctgcgagggg ctcgaggccg gcgagcggta ccagacgctg ctcgggatca
      961 ccgggtcggg gaagtcgttc acgatcgccg gggtcattgc cagggtccag cggcccacgc
     1021 tggtcctggc ccccaacaag agcctggccg cccagctgac cagcgagttc cgggagttct
     1081 tccccaggaa ccgggtggag tacttcgtct cctactacga ctactaccag cccgaggcct
     1141 acctcccgtc gaccgacacc tacatcgaga aggacagctc gatcaacgac gagatcgacc
     1201 ggctgcggca ctcggccacc agcgggctgc tttcccggcg cgacgtcatc atcgtggcct
     1261 cggtgtcggc catctacggc ctcggcgccc cagaggaata cgcccaccag ctgctcatgc
     1321 tctcggtggg ggaggagcgc gaccagcgct cgatcctctc gaagctggtc gacatggcct
     1381 acgagcgcaa cgacctcaac ttcgtccgca acaagttccg ggtccggggc gacacgatcg
     1441 aggtcttccc ggcctacgag gagcgggcca cccgcatcca gctcttcggc gacgaggtgg
     1501 aacggatcgt ctccgtcgac cccgtcaccg gggaggtcgt ggaagacctg gaacggctgt
     1561 gtatcttccc cgcctcgcac tacgtggtct ccaaggcccg gatggagcgg gccgtcgccc
     1621 agatcgagga ggagctgaag gaccgcctgg cggagctgga gggggccggc aagctgctcg
     1681 aggcccagcg gctgcggatg cgcaccacct acgacctcga gatgctccgg gaggtcggcg
     1741 tctgctcggg gatcgagaac tactcccgcc acctcgacgg ccgctcggcc gggcagcgcc
     1801 cctacacgct gctcgactac ttcccgtccg acttcctcac gatcatcgac gagtcccacg
     1861 tggccgtccc ccagctccac ggccagtacg agggcgaccg gtcacggaag gacacgctgg
     1921 tcgagcacgg cttccggctg ccctcggcgc tcgacaaccg gccgctgcgc ttcgaggagt
     1981 tcgtcgagcg ggtcggccag gtggtcttca tgagcgccac gccgtccccc tacgagctcg
     2041 aggtgtcgtc ccgggtggtg gagcagatcg tccgccccac cggcctgatg gacccccagg
     2101 tcgtggtccg gccgacgaag ggccagatcg acgacctggt ggcagagatc cggggccggg
     2161 aggaggccga cgagcgggtg ctcgtcacca cg
//
LOCUS       DATGJT010000118         2013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_15254, whole genome shotgun sequence.
ACCESSION   DATGJT010000118 DATGJT010000000
VERSION     DATGJT010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15254"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..1000)
                     /locus_tag="VKX24_02075"
     CDS             complement(68..1000)
                     /locus_tag="VKX24_02075"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07297.1"
                     /translation="MGFNPTGTDPGLVRQYLSEVGRHPLLTAEDETRLARLVKTGDQA
                     TATIASGRVRGAVHRAVLRRAVRAGHDAADEFVTANLRLVVSIAKHYQWSGLSLLDLI
                     QEGNLGLIRAVHGFDETKGFRFSTYATWWIRQAMVRGIDKTSRSIRLPVHVVDHLHAL
                     RRAEAALQARLGRAPSPEELAEELGWDTSEVSDIEMLPSEPLSLDAKLTDDGDDAVQA
                     TIADPDAPDPSDSLRHELLAEKLRTLLRQVADRDRVVLTLRYGLDGETPRSLEETGHI
                     LGISRERVRQIEARAMRALQFSAEGDEVAELLVS"
     gene            1155..>2013
                     /locus_tag="VKX24_02080"
     CDS             1155..>2013
                     /locus_tag="VKX24_02080"
                     /inference="COORDINATES: protein motif:HMM:NF019348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ07298.1"
                     /translation="MPGRGGIGMGEQGGTLQLPGYFRASEERFLAEELEALAAREGLR
                     IPRQVLASLVAALESGKHIMLTGPPGSGKTTLAFLVAELAKHTFRSNGYLAATATTDW
                     DVGDTIGRYWSTPEGPIFREGFILEAIQRGRWLIIDEMNRADFDKAFGPLFTTFANQP
                     VTLPFKRVGHSSYLSLVPPGAEAPPQTEAVTVPLRWRIIATINEFDKKTLHRMSFALM
                     RRFAFIEVEPPDDEVFIELMGGPDEIACDLLLVRRFVDLGPGLFIDASNFTRRRAMDG
                     DATRSRILYE"
BASE COUNT          312 a          667 c          722 g          312 t
ORIGIN      
        1 cacgcgaaga cctcgagatg gcgcgacagg cgacggagct actgcaggac ccgtgagcgt
       61 gcagcgatca ggagacgagg agctcggcga cctcgtcgcc ctccgccgag aattgcaggg
      121 cgcgcatggc cctggcctcg atctggcgga cgcgctcgcg gctgatgccg agaatgtggc
      181 ccgtctcctc cagggaacgg ggcgtctccc cgtcgaggcc gtaacgaagc gtgaggacga
      241 cgcggtcacg gtccgccacc tggcgtagca gcgtccgcag cttctcggcg aggagctcgt
      301 ggcgcaggct gtcggagggg tcgggggcat cggggtcggc gatggtcgcc tgcacggcgt
      361 cgtcaccgtc gtcggtgagc ttggcgtcga ggctgagcgg ctcacttggc agcatctcga
      421 tgtcgctgac ctcggaagtg tcccaaccga gctcttcggc gagctcctcc ggggacggcg
      481 cgcggccgag tcgggcttgc agcgccgctt cggcgcgacg cagggcatgg aggtggtcga
      541 cgacatgcac gggaagccgg atcgagcgcg acgtcttgtc gatcccccgg accatggcct
      601 ggcggatcca ccaggtggcg taggtggaga agcggaagcc cttggtctcg tcgaagccgt
      661 gcacggcccg gatgagcccg aggttcccct cttggatgag atcgagcagg gagagaccgg
      721 accactggta gtgcttggcg atggacacga cgagccggag gttggcggtg acgaactcgt
      781 cggcggcgtc gtggccggcc cgcaccgctc gccgcagcac ggcgcggtgg acggcacccc
      841 gcacgcggcc cgaggcgatc gtcgccgtgg cctggtcccc ggtcttgacc agcctggcca
      901 gacgggtctc gtcctcggcg gtgaggaggg ggtggcggcc cacctcggag aggtactgcc
      961 ggacgagacc gggatcggtt cctgtcggat tgaagcccac gatctcgacg ttagggcggc
     1021 acgccaaagg agaagcccgc cgaaggtccc atcctcccga ggccttcggc cgttcggatg
     1081 ccaggcacgg ccggccgcga tggggcgcaa gtcctatgtg agtgcacccg tccctcgtgc
     1141 taatcgtgga ggaggtgccg gggcgagggg ggatcggcat gggggaacag gggggaaccc
     1201 tgcaactgcc cgggtacttc cgggcctcgg aggagcgctt cctcgccgag gagctcgaag
     1261 ccctcgcggc gcgagaggga ctgcgcatcc cccggcaggt gctggcctcg ctcgtggccg
     1321 cgctggaatc gggcaagcac atcatgctca ccggtccacc gggctcgggg aagacgacgc
     1381 tggcgttcct cgttgcggag ctggccaagc acaccttccg gtcgaacggc tacctggcgg
     1441 cgacggccac gaccgattgg gacgtgggcg acaccatcgg ccgctactgg tccactccgg
     1501 aaggcccgat cttccgcgag ggcttcattc tggaagccat ccagcgcggg cggtggctga
     1561 tcatcgacga gatgaaccga gccgacttcg acaaggcctt cggcccgttg ttcacgacct
     1621 tcgccaacca gcccgtgacg ctgccgttca agcgcgtcgg ccactcgtcg tacctgtcgc
     1681 tcgtgcctcc cggggcggag gcccccccgc agaccgaagc ggtcacggtg ccgctgcggt
     1741 ggcggatcat cgccaccatc aacgagttcg acaagaagac gctccatcgc atgtccttcg
     1801 ctctgatgcg ccgcttcgcc ttcatcgaag tggagccgcc cgacgacgag gtcttcatcg
     1861 agctcatggg cggtcccgac gagatcgcct gcgacctgct cctggtacgg cggttcgtcg
     1921 acctcgggcc cgggttgttc atcgacgcct ccaacttcac ccggcgccgg gccatggacg
     1981 gcgacgccac ccggtcccgg atcctgtacg agg
//
LOCUS       DATGJT010000119         2364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1155919, whole genome shotgun sequence.
ACCESSION   DATGJT010000119 DATGJT010000000
VERSION     DATGJT010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155919"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VKX24_02085"
     CDS             <1..453
                     /locus_tag="VKX24_02085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07299.1"
                     /translation="YGGVPMSSVLDPPRPSPARAPRRVALIAVVAVVAALALVLAAQQ
                     FLPSPATTRRITVDNPTPFHLEIDADGTGSARAVTVGAIGREQAKTFDGVIDQGGQWI
                     FRFSSGGTDGGEMRVSRAQLEANGWKITVADDVARRLQAAGVPPSPRE"
     gene            499..786
                     /locus_tag="VKX24_02090"
     CDS             499..786
                     /locus_tag="VKX24_02090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07300.1"
                     /translation="MEEVVWAAAAAMVALVPPLRRRFLPVSKAVLSAGLGVGAAALRG
                     VEGVIVAAACGDQGAGDGKAAATGAAPATASRPSAAAGAAKQPRRPTAKAR"
     gene            957..>2364
                     /locus_tag="VKX24_02095"
     CDS             957..>2364
                     /locus_tag="VKX24_02095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HLJ07301.1"
                     /translation="MTVARIPGSESLEHDLRAAVSGEVRFDAGTRALYATDASNFRQP
                     PIGVVIPRTTDDVIATHRVCHDHGAPILARGCGTSLSGETVNYAVVIDFSKYLHEIGE
                     IDPERRTVRVQPGAINEAVNVACGRHGLVFGPDPSTHAYCTIGGNIGNNSCGVHSLLA
                     RFEGDGSRTSDNVAELDVLTYDGLRLRVGPTPDDELARIIAEGGRRGELYRRLAELRD
                     RYADLIRARFVDIPRRVSGYNIDELLPEKGFNVARALVGTEGTCVTVLEATLKLVPHP
                     PHRALLVVGYHDIFGVGAHLPEILADRPMACEAIDSLLFEDEQQLGIHPGALTQLPDG
                     RAWVLVEFGGQTQQEADERARALADRLGKDDDPPVGVSVLDDPGQTRKLWEVREGGLA
                     ATAFPPDGRDHWPGWEDSAVPPDRVADYLRDLKGLYEKYGYRGAIYGHLGDGCIHSRI
                     SFDLRTAGGLADYRSFMED"
BASE COUNT          320 a          893 c          840 g          311 t
ORIGIN      
        1 tacggaggtg tgcccatgag ctcggtcctc gatcccccgc gtccttcgcc cgcccgcgcc
       61 ccccggcggg tggcgctgat cgccgttgtg gcggtcgtcg ccgccctggc gctggtcctc
      121 gccgcccagc agttcctccc gtcgccggcc acgacccggc ggatcaccgt cgacaatccc
      181 acgcccttcc acctggagat cgacgccgac gggaccgggt cggcccgggc ggtcaccgtc
      241 ggcgcaatcg gccgggaaca ggcgaagacg ttcgacggcg tcatcgacca gggcggccag
      301 tggatcttcc gcttttcctc gggcggcacg gatggcggcg agatgcgggt cagccgggcc
      361 cagctggagg cgaacggctg gaagatcacc gtcgccgacg acgtcgcccg gcggctccag
      421 gcggcgggcg tgccgccgtc gccccgggag tgatcggttg gtagtgtcgc cccggtcctc
      481 gggaaggggt tgatcccaat ggaagaagtc gtctgggccg ccgccgcggc gatggtggcg
      541 ctcgttcccc cgctccggcg gcgattcctg ccggtgtcca aagcggtgct ctcggccggg
      601 ctcggcgtcg gggccgccgc gctccggggc gtcgaaggcg ttatcgtggc cgccgcctgc
      661 ggcgaccagg gggcgggcga cgggaaggcg gcggcgaccg gcgcagcccc ggcgaccgcc
      721 tcgcggccct ccgccgcggc cggagcggcg aagcagccgc ggcgcccgac cgccaaagcg
      781 cgctagcgcc cccgccggct ggtcccggcg ctggagcagt gcttcggccg ctccggcgat
      841 gccctcgagg cgtggtacgg cgacaccccg ggcggcccgt ccgcctgagg accgggcgcc
      901 ggccgcggcc gcagaatccg gtttcaccgt tgagccgccc ggggcagtcg accggcatga
      961 cggtcgcgcg gatccccggg tccgagagcc tggagcacga cctgcgcgcc gccgtgagcg
     1021 gcgaagtccg cttcgacgcc ggcacgcggg cgctctacgc caccgacgcc tcgaatttcc
     1081 gccagccgcc catcggcgtc gtcatcccga ggacgaccga cgacgtcatc gccacccacc
     1141 gggtctgcca cgaccacggc gccccgatcc tggcccgggg ctgcgggacc agcctgtcag
     1201 gcgagacggt caactacgcc gtggtcatcg acttctccaa gtacctccac gagatcgggg
     1261 agatcgaccc cgagcggcgc acggtgcggg tccagccggg ggccatcaac gaagcggtca
     1321 acgtcgcctg cgggcgccat ggcctggtat tcgggcccga cccctcgacg cacgcctact
     1381 gcaccatcgg cgggaacatc ggcaacaact cctgcggtgt gcactcgctg ctggcccgct
     1441 tcgagggcga cggcagccgc acgtcggaca acgtcgccga gctcgacgtc ctcacctacg
     1501 acgggctgcg gctgcgggtg ggcccgactc ccgacgacga gctggcccgg atcatcgccg
     1561 aaggcgggcg ccggggcgag ctctatcgcc ggctggccga actgcgggac cgctacgccg
     1621 atctcatccg ggcccggttc gtcgacatcc cccgccgggt gtcgggctac aacatcgacg
     1681 aactgttgcc ggagaagggt ttcaacgtcg cccgggcgct ggtcggcacc gaggggacgt
     1741 gcgtcacggt gctggaggcg acactgaaac tcgtccccca cccgccgcac cgggccctgc
     1801 tggtggtcgg ctaccacgac atcttcggcg tcggcgccca cctgcccgag atcctcgccg
     1861 accggccgat ggcctgcgag gcgatcgaca gtctgctgtt cgaggacgag cagcagctcg
     1921 gcatccatcc cggggccctc acgcagctcc ccgatggccg ggcgtgggtc ctggtggagt
     1981 tcggcggcca gacgcagcag gaggccgacg agcgggcccg ggcgctggcc gaccgcctcg
     2041 ggaaggacga cgacccgcct gtcggcgtct ccgtcctcga cgaccccggc cagacccgaa
     2101 agctgtggga ggtccgggag ggaggactcg ccgccaccgc cttcccgccc gacggacggg
     2161 accactggcc gggctgggag gactccgccg tcccccccga ccgggtcgcc gactacctgc
     2221 gggacctgaa gggcctctac gagaagtacg gctaccgggg cgcaatctac ggccacctcg
     2281 gcgacggctg catccactcc cggatctcct tcgacctccg caccgccggc ggcctggccg
     2341 actaccgctc gttcatggag gacg
//
LOCUS       DATGJT010000120         2955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_223760, whole genome shotgun sequence.
ACCESSION   DATGJT010000120 DATGJT010000000
VERSION     DATGJT010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223760"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..144)
                     /locus_tag="VKX24_02100"
     CDS             complement(<1..144)
                     /locus_tag="VKX24_02100"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HLJ07302.1"
                     /translation="MADTTFDKPSITSALAQRVVAAAEAKADEMGHPFVIAVVDESGV
                     LKAF"
     gene            complement(189..1079)
                     /locus_tag="VKX24_02105"
     CDS             complement(189..1079)
                     /locus_tag="VKX24_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013986874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase"
                     /protein_id="HLJ07303.1"
                     /translation="MGRFLGVGSNGARRLRELLAGPEPVLAPGVFDGLGARLVEEAGF
                     PAVYMTGFGTAAALLGRPDVGLLSMSEMVDNAARIVAACELPVIADADTGYGNPLNVI
                     RTVQEYERAGVAAIHIEDQVAPKKCGHMEGKQVIACAEMEAKIRAAVAARRSPDFVLI
                     ARTDARAVEGIDAALERARRYRDAGADVLFVEAAESEDEIALVAERLGDVPLLFNWAE
                     GGKTPPIDHARLCELGFRIVIFPIATLLGTTAWIRHALAEIRKAGTPLPVMDELPRFA
                     EFLDFIGLPEIHELEQRFRS"
     gene            1137..1328
                     /locus_tag="VKX24_02110"
     CDS             1137..1328
                     /locus_tag="VKX24_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07304.1"
                     /translation="MQFSPELRDRVADGTITGEDLARTGEPDREALRRRAAHAGPIDD
                     DTLLYRVEFHVVGQEPDAP"
     gene            complement(1333..1743)
                     /locus_tag="VKX24_02115"
     CDS             complement(1333..1743)
                     /locus_tag="VKX24_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020550256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ07305.1"
                     /translation="MNPHISAITLGVGDLAAAKRFYAEGLGWPIEQDYPQWVSFKMDD
                     GSTMLGLYPKEALAGDAGVAPDGTGFRGVTLSYIVRSEERVAEVLAEAERAGATIVAP
                     AERSQWGGASGHFADPEGVIWKVASGNGPAPFAE"
     gene            1839..2717
                     /locus_tag="VKX24_02120"
     CDS             1839..2717
                     /locus_tag="VKX24_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006602474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07306.1"
                     /translation="MDEQKWLADRFETHRSHLRSVAYRMLGSGSEADDAVQEAWIRLS
                     RTGAADVENLGGWLTTVVSRVCLDMLRSRSARREEPFETPVHEAAPDETAGRDPEHEA
                     LVADSVGPALLVVLETLAPAERLAFVLHDMFAVPFDEIGAIVGRSPVAARQLASRARR
                     RVQGTAAGAPADRARQRAVVEAFLAASRQGDFAALLALLDPDVVLRADEVAVATGNIG
                     AEVRGAAAVAETFAGRARAARPALIEGSVGLVWAQGGKPKAVFDLTIAGGRIVAIDLV
                     LDPDDVNALDVVLLDD"
     gene            complement(2817..>2955)
                     /locus_tag="VKX24_02125"
     CDS             complement(2817..>2955)
                     /locus_tag="VKX24_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003962655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HLJ07307.1"
                     /translation="RMEIRALFAELVPRLRRIEPAGPPELSRSIFVGGHKHLPVRYAL
                     D"
BASE COUNT          398 a         1077 c         1075 g          405 t
ORIGIN      
        1 gaacgccttc agcactccgc tctcgtcgac cacggcgatc acgaacggat ggcccatctc
       61 gtccgccttg gcctcggcgg cggcgacgac ccgctgcgcc agggcgctgg tgatgctggg
      121 cttgtcgaag gtggtgtcgg ccacggtgcc tccttgtcgg tggggctcgg aactcggaag
      181 gggaaacgtc aggaccggaa gcgctgctcc agctcgtgga tctcgggcag gccgatgaag
      241 tcgaggaact cggcgaagcg gggcagctcg tccatgaccg gcagcggcgt ccccgccttg
      301 cggatctcag ccagggcgtg gcggatccag gccgtcgtgc cgagaagcgt ggcgatcggg
      361 aagatcacga tgcggaagcc gagctcgcac agccgggcgt ggtcgatcgg cggcgtcttg
      421 ccgccctcgg cccagttgaa cagcagcggc acgtcgccga ggcgctcggc cacgagggcg
      481 atctcgtcct cgctctccgc cgcttccacg aagaggacgt cggcgccggc gtcccggtag
      541 cgccgggccc gctccagcgc ggcgtcgatg ccctctacgg cccgggcgtc ggtccgggcg
      601 atgagcacga agtcgggcga gcgccgggcc gccaccgcgg cccggatctt ggcctccatc
      661 tcggcgcagg cgatcacctg cttgccctcc atgtgcccgc acttcttcgg ggccacctgg
      721 tcctcgatgt ggatggcggc gacgccggcc cgctcgtact cctgcaccgt ccggatgacg
      781 ttcagcgggt tgccgtagcc ggtgtcggcg tcggcgatga ccggcagttc gcaggcggcc
      841 acgatccggg cggcgttgtc caccatctcg ctcatggaga ggagcccgac gtcgggccgg
      901 ccgaggagcg ccgccgccgt cccgaacccc gtcatgtaca ccgcggggaa ccccgcctcc
      961 tcgacgagcc gggcgccgag cccgtcgaac acgccggggg ccaggacggg ctcgggcccg
     1021 gccagcagct cccgcagccg ccgggcgccg ttcgagccca ccccgaggaa ccgtcccatc
     1081 ccccacctcc tgtccaggac ggaaaccgag atgctacgcc cggcgataat cacggcgtgc
     1141 agttcagccc ggagctccgc gatcgggtgg cggacgggac gatcaccggg gaggacctcg
     1201 cccgcacggg cgagccggac cgggaggcgc ttcgccgacg ggccgcccac gccggcccga
     1261 tcgacgacga cacactcctc taccgcgtcg agttccacgt cgtgggccag gaacccgacg
     1321 cgccgtgacg ggctattcgg cgaagggcgc cgggccgttg cccgaggcga ccttccagat
     1381 gacgccctcg gggtcggcga agtgcccgct ggccccgccc cactggctcc gctcggccgg
     1441 cgcgacgatc gtggcgccgg cccgctcggc ctcggccagg acctcggcca cccgctcctc
     1501 cgagcggacg atgtaggaca gcgtcacacc ccggaagccg gtgccgtcgg gcgccacgcc
     1561 ggcgtcgccg gccagggcct ccttggggta gaggccgagc atcgtcgagc cgtcgtccat
     1621 cttgaacgac acccactgcg ggtagtcctg ctcgatcggc cagccgaggc cctcggcgta
     1681 gaagcgcttg gcggcggcga ggtccccgac tccgagggtg atggcgctga tgtgcgggtt
     1741 catggctgaa agggtctcct tggggtctcg gccggcggtc acaccggccg gatttcggac
     1801 gtcagtacga tgacggaccg caacgaggga acgtgacagt ggacgagcag aagtggttgg
     1861 ccgaccggtt cgagacccac cgcagccatc tgcggtcggt ggcctaccgg atgctcggct
     1921 cggggagcga agccgacgac gccgtgcagg aggcctggat ccggctcagc cggacgggcg
     1981 ccgccgacgt cgagaacctc ggcgggtggc tgacgacggt ggtctcccgg gtctgcctcg
     2041 acatgctgcg ctcccgcagc gcccggcggg aggagccctt cgagacgccg gtgcacgagg
     2101 cggctcccga cgagacggcc ggccgcgacc cggagcacga ggcgctggtg gccgactccg
     2161 tcggcccggc gctgctggtg gtgctggaga cgctggctcc ggccgagcgc ctggccttcg
     2221 tgctccacga catgttcgcc gttcccttcg acgagatcgg cgccatcgtc gggcgctccc
     2281 ccgtcgccgc ccgccagctg gccagccggg cccggcgccg cgtccagggg acggcggccg
     2341 gcgccccggc cgaccgggcc cgtcagcggg ccgtggtcga ggccttcctg gccgcttccc
     2401 gccagggcga cttcgcagct ctcctcgccc tgctcgaccc tgacgtcgtt ctccgggccg
     2461 acgaggtggc ggtggccacc ggcaacatcg gcgccgaggt gcggggcgcg gcggcggtgg
     2521 ccgagacctt cgccggccgg gcccgggcgg cgcgaccggc gctgatcgaa ggttcggtcg
     2581 ggctcgtctg ggcccagggc gggaaaccga aggcggtctt cgacctcacg atcgccggcg
     2641 ggcggatcgt ggccatcgac ctcgtcctcg acccggacga cgtcaacgcc ctcgacgtcg
     2701 tcctcctcga cgactgaacc ttttggagcg ggtgacgcac cgtcacggtg tgtcacgccc
     2761 tccaaaagcc gtcgccgcag agttggggcc gggcccggag cccggcgtcc acctcgtcag
     2821 tccagggcgt agcgcacggg caggtgcttg tggccgccga cgaagatcga ccgggagagc
     2881 tccggcgggc cggccggttc gatccgccgc agccgcggga cgagctcggc gaacagcgcc
     2941 ctgatctcca tcctg
//
LOCUS       DATGJT010000121         3765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_327971, whole genome shotgun sequence.
ACCESSION   DATGJT010000121 DATGJT010000000
VERSION     DATGJT010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3765
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327971"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..737
                     /locus_tag="VKX24_02130"
     CDS             3..737
                     /locus_tag="VKX24_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012119102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07308.1"
                     /translation="MRGLSLSVPEGKIVALLGSNGAGKSTTLKAVAGLLYSEHGEVTQ
                     GTIVYEGKKITRSNPADIVRAGISLVMEGRRVFEHLTVHENLLTGAYTRRSGIGEDLD
                     LVYDFFPKLRDRRTQQAGYLSGGEQQMLAIGRSLMSKPKLMMLDEPSLGLAPLLVEEI
                     FGRIRALNNEIGTTVLLVEQNARRALEIADHAYVMENGRIVLEGPSAELASNPDVQEF
                     YLGLSEGGARKSYRDVKHYKRRKRWL"
     gene            734..1948
                     /locus_tag="VKX24_02135"
     CDS             734..1948
                     /locus_tag="VKX24_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011955406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07309.1"
                     /translation="MSSLEAYRAGFDERVFDLLRPAAETVPALAARVAQAGMVPDDLV
                     DVAAVDRLAVLSKDDLIDLQAKDPPFGGGLAPGSRIRRIFQSPGPIYEPEPDVDDPWR
                     AASALEAAGFGPCDTVLNCFGYHLTPAGVMFEEGARALGCRVVPAGVGNFDLAVRAAR
                     DLGATAYIGLPSYLKALLEKAEDVDGPPLSFQRAMVTAEPLPPSLRTWLEERVPVVRQ
                     MYGTAESGNLGFECEAASGLHVPVDALVEVCGLDDGVPRLDGGEGQVVVTVFSPHYPL
                     VRFGTGDLSAFAPGECPCGRPSPRLVGWLGRTGEAVKVRGMFLHPRQVTAVMAQVPSV
                     AAYRFVIDRVEHRDVLRCEVVPAAEGIDHGHLAAEVHDTIRSGLRFDVEVQVVRALEA
                     GANPITDVRTWE"
     gene            2401..>3765
                     /locus_tag="VKX24_02140"
     CDS             2401..>3765
                     /locus_tag="VKX24_02140"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07310.1"
                     /translation="MSETLSFINLTDASLVSEDELLDRAREGDRSAFGTLYLRHRDAA
                     RKVAGMCASSAADAEDAVAEGFARVFAALPRMAGRQIAFRPYLLTCVRNAATDRLRRE
                     RRIDLREQMPETPGTTQADDVALLGLERNLVGEALQALPARWRTVLWLTEVEGLSPAE
                     VSRRIGIKPNAVAALAYRARKGLREAYLQAHLKAEASEECRSTVGKLGNYVRGDLGEK
                     ERVAVQAHLDACAKCRCRRDELTDVNATLRNAFLPVPLLLAGLQRKAFGFGHMATFMT
                     PDISQTAPLADNPLVHKALAGLTMVVLALSGSAVPTVMHHSGQPAPLAAADPSAVAAS
                     VGAAVPAVAAPVSAPEATRPDASARAEVASAPAAPAAPAPAPAGDPAAYRDLEGANHS
                     TLLFSGRNDGSPNYAGGTRSSIIHRPAGSTGGLLDGTPVGAALDSVVSAVSQAVPLPV
                     DVGLS"
BASE COUNT          499 a         1406 c         1317 g          543 t
ORIGIN      
        1 tcctgcgcgg cctgtccctg tccgtgcccg aggggaagat cgtcgccctg ctcggctcca
       61 acggagccgg gaagagcacc acactcaagg ccgtggccgg cctgctctac tcggagcacg
      121 gcgaggtcac gcagggcacg atcgtctatg agggcaagaa gatcacccgc tccaatccgg
      181 ccgacatcgt gcgggccggc atctcgctgg tcatggaggg ccggcgggtc ttcgagcacc
      241 tgacggtgca cgaaaacctg ctcaccgggg cctacacccg acgctccggc atcggtgagg
      301 acctcgacct cgtctacgac ttcttcccga agctgcggga ccggcgcacc cagcaggccg
      361 gctacctctc aggcggcgag cagcagatgc tggccatcgg ccgctcgctg atgtcgaagc
      421 ccaagctgat gatgctcgac gagccgtcgc tcggcctcgc cccgctcctc gtggaggaga
      481 tcttcgggcg gatccgggcg ctgaacaacg agatcggcac caccgtcctc ctcgtggagc
      541 agaacgcccg gcgggcgctg gagatcgccg accacgccta cgtgatggag aacggccgca
      601 tcgtcctcga ggggccgtcg gcggagctgg cctcgaaccc cgacgtccag gagttctacc
      661 tcgggctgtc ggagggcggg gcgcgcaaga gctaccgcga cgtcaagcac tacaagcgcc
      721 ggaagcggtg gctgtgagtt cgttggaggc gtaccgcgcc ggcttcgacg agcgcgtctt
      781 cgacctgctc cggccggcgg ccgagaccgt gccggcgctg gccgcccggg tggcccaggc
      841 cggcatggtg cccgacgacc tcgtcgacgt ggccgccgtc gaccggctgg ccgtcctgtc
      901 caaggacgac ctcatcgacc tccaggccaa ggaccctccc ttcggcggcg gcctggcccc
      961 ggggtcccgg atccggcgga tcttccagtc gcccgggccg atctacgaac cggagcccga
     1021 cgtcgacgac ccctggcggg cggcgtcggc gctggaggcg gcggggttcg gcccctgcga
     1081 caccgtcctc aactgcttcg ggtaccacct gacgccggcg ggggtgatgt tcgaggaggg
     1141 ggcccgcgcg ctgggctgcc gggtcgtgcc ggccggcgtg ggcaatttcg acctggccgt
     1201 gcgggcggcc cgcgatctcg gcgccaccgc ctacatcggc ctgccgagct atctgaaggc
     1261 cctcctcgag aaggcggagg acgtcgacgg gccgccgctg tcgttccagc gggccatggt
     1321 caccgccgag ccgctcccgc cgtcgctgcg gacgtggctc gaggagcggg tgccggtcgt
     1381 ccgccagatg tacgggacgg cggagtcggg gaacctcggc ttcgagtgcg aggccgcctc
     1441 cggactccac gtccccgtcg acgccctggt ggaggtctgc ggcctcgacg acggcgtccc
     1501 ccggctcgac ggcggcgagg gccaggtcgt ggtcaccgtg ttctcgcccc actatccgct
     1561 ggtccggttc gggacgggcg atctgtcggc cttcgccccc ggcgagtgcc cctgcggccg
     1621 gccgagcccc cggctggtcg gctggctcgg gcggacgggc gaggccgtga aggtccgcgg
     1681 gatgttcctc cacccccgcc aggtgacggc ggtgatggcc caggtgccgt cggtggccgc
     1741 ctaccggttc gtgatcgacc gggtcgagca ccgcgacgtc ctgcggtgcg aggtcgtccc
     1801 ggcggcggag gggatcgacc acggccacct ggccgccgag gtccacgaca cgatccgctc
     1861 gggcctccgc ttcgacgtgg aggtgcaggt cgtgagggcg ctcgaggcgg gggccaaccc
     1921 catcaccgac gtccgcacct gggagtgacc ggcagcccgt tcgcgaagtt tgtgacgcgg
     1981 cgggcggttc ccccgaagtc ctgacgtgcg catcccacgc cgtcccggag agcctccccc
     2041 gaatcggaca tttccggcat gtgtgccgcc gtcgggagga tcgggtgaac ccccggcgaa
     2101 tagcttcctt accaggcgac cgggtggcgg gtcgcccaag gtcaaggagc atcacgtggg
     2161 ccgatccccc aggccgacga cgcttccgac tcccgcggcc gagctcgtgg caggcccgtc
     2221 cgcgtccagt gtcagagcgt cctcactcac ccagacgtcc agagttctcc ccgaaatccc
     2281 gaacgctgaa cgcgttcttt ctccgtccct tttgtcacga ggcgtgggat atgggagaat
     2341 tcatgtggat tcacgtcatc tgggcgttcc acgggcgttt cgtgggctgg agggagcgcc
     2401 gtgagtgaga ctttgagctt catcaacttg accgacgctt ccctggtcag cgaggacgag
     2461 ctcctcgacc gggcccggga gggggaccgg agcgccttcg gcacgctgta cctgcggcac
     2521 cgtgacgccg cccgcaaggt ggcggggatg tgcgcctcgt cggcggccga cgccgaagac
     2581 gccgtggccg agggcttcgc ccgggtcttc gccgccctgc cccgcatggc cggccggcag
     2641 atcgccttcc gtccctacct gctgacctgt gtccgcaacg ccgccaccga ccgcctccgc
     2701 cgtgagcgcc gcatcgacct gcgggagcag atgccggaga cccccggcac cacccaggcc
     2761 gacgacgtcg ccctgctcgg gctggagcgc aacctggtcg gcgaggcgct gcaggcgctg
     2821 cccgcccggt ggcgcacggt tctctggctg accgaggtcg agggcctgtc cccggccgag
     2881 gtctcccgcc ggatcggcat caagcccaac gccgtcgccg ccctggccta ccgggcccgc
     2941 aaggggctgc gggaggctta cctccaggcc cacctcaagg ccgaggccag cgaggagtgc
     3001 cggtccacgg tcgggaagct cgggaactac gtccgcggcg acctcggcga gaaggagcgg
     3061 gtggccgtcc aggcgcacct cgacgcctgc gccaagtgcc gctgccggcg cgacgagctg
     3121 accgacgtca acgccacgct ccggaacgcc ttccttccgg tccccctcct cctggccggc
     3181 ctgcagcgca aggcgttcgg cttcggccac atggccacgt tcatgacgcc cgacatctcg
     3241 cagacggcgc cgctggccga caacccgctg gtccacaagg cactggccgg gctgacgatg
     3301 gtcgtcctgg ccctgtccgg ctcggcggtc ccgacggtca tgcaccacag cgggcagccg
     3361 gcccccctgg ccgccgccga tccgtcggcc gtcgccgcat cggtgggcgc cgccgtcccg
     3421 gccgtcgccg ccccggtgag cgctccggag gcgaccaggc ccgacgcttc ggcccgggcg
     3481 gaggtcgcct cggcgccggc cgccccggcc gctccggctc cggcccccgc cggtgacccc
     3541 gccgcctacc gcgacctcga gggcgccaac cacagcacgc tgctcttcag cggccgcaac
     3601 gacggctccc cgaactacgc cggcggcacc cgcagctcga tcatccaccg gcccgccggt
     3661 tcgaccggcg gcctcctcga cgggacgccg gtgggcgccg ccctcgactc cgtcgtctcg
     3721 gcggtatcgc aggcggtccc gttgccggtc gatgtcggcc tgtcg
//
LOCUS       DATGJT010000122         2407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_846490, whole genome shotgun sequence.
ACCESSION   DATGJT010000122 DATGJT010000000
VERSION     DATGJT010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846490"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /gene="mftE"
                     /locus_tag="VKX24_02145"
     CDS             complement(<1..680)
                     /gene="mftE"
                     /locus_tag="VKX24_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013874023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0140604 - mycofactocin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mycofactocin biosynthesis peptidyl-dipeptidase
                     MftE"
                     /protein_id="HLJ07311.1"
                     /translation="MAGGRLAALAWPEAASVAAGAILAVPVGSTEQHGPHLPLGTDSD
                     VATALAERLAAARADVLVAPVLPYGSAGEHAAFPGTLSIGAAALELVVVELVRSASAF
                     AGVVLVSGHGGNAEPLAAAVARLRAEGRAVLAWSPRIAGGDAHAGRTETSLLLALAPG
                     AVRLRAAEAGDVRPLAAVMGELRRRGVAAVSRNGVLGDPRGASAAEGRRILDDLSADL
                     VAAVEAWRR"
     gene            complement(680..1879)
                     /gene="mftD"
                     /locus_tag="VKX24_02150"
     CDS             complement(680..1879)
                     /gene="mftD"
                     /locus_tag="VKX24_02150"
                     /EC_number="1.4.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020418891.1"
                     /note="MftD, an enzyme found in the mycofactocin
                     biosynthesis locus, performs an oxidative deamination of
                     3-amino-5-[(p-hydroxyphenyl)methyl]-4,
                     4-dimethyl-2-pyrrolidinone (AHDP). The resulting compound,
                     now called pre-mycofactocin (PMFT), is a biologically
                     active redox cofactor that can oxidize the
                     non-exchangeable NADH of TIGR03971 family SDR-type
                     oxidoreductases; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0140604 - mycofactocin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pre-mycofactocin synthase MftD"
                     /protein_id="HLJ07312.1"
                     /translation="MAGDWFESVAEAERRAAKRLPPSVHQAIRAGSERGLTLADNVAA
                     FGELGFAPHIAGLSAKREQATVVMGQPISMPLFISPTGVQAVHPDGELAVARAAAARG
                     TAMSLSSFASKPIEEVVAANPQTFLQVYWAGSRERMLQRLERARAAGAVGLLVTLDWS
                     FVHVRDWGSPFIPERIDAKAVLRYAPEVLRRPRWLAQWAKTKALPDLTVPNWVPAGEP
                     APTFFAAYGEWMMTPPPSWDDLRWLREEWGGPLMLKGIMRVDDARRAVDVGATAISVS
                     NHGGNNLDGTPATIRALPPIVEAVGGDIEVVIDGGVRRGGDVVKAVALGARAAMIGRA
                     YLWGLAANGQAGVENVLDILRNGIDSALLALGRSSVSELAPSDVLVPPGFVRRLGAPP
                     AAPDSDG"
     gene            complement(1879..>2407)
                     /gene="mftC"
                     /locus_tag="VKX24_02155"
     CDS             complement(1879..>2407)
                     /gene="mftC"
                     /locus_tag="VKX24_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020460870.1"
                     /note="MftC is a radical SAM/SPASM enzyme that catalyzes
                     the first two steps in biosynthesis of the electron
                     carrier mycofactocin from the terminal Val-Tyr dipeptide
                     of the precursor peptide MftA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0031179 - peptide modification [Evidence
                     IEA];
                     GO_process: GO:0140604 - mycofactocin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="mycofactocin radical SAM maturase"
                     /protein_id="HLJ07313.1"
                     /translation="VWDELHPTAAQQHELYRWLLAHGERVLTGDSFFHLAGYGEALPG
                     LNLCGAGRVVCLIDPVGDVYACPFAIHDAFRAGNVRDAGGFAAVWRSSELFRALRGPQ
                     SAGACGVCSAYDACRGGCMAAKFFTGLPIAGPDPECVKGFGEPRLATVEPGSAPRPSP
                     DHSRPAGVPVTLGRR"
BASE COUNT          319 a          946 c          898 g          244 t
ORIGIN      
        1 cggcgccagg cctccacggc ggcgacgagg tcggcgctca ggtcgtcgag gatccgccgg
       61 ccctcggcgg cggaggcgcc ccggggatcg ccgaggacgc cgttgcgcga caccgccgcc
      121 acgccgcggc ggcggagctc gcccatgacc gccgccagcg ggcggacgtc gcccgcttcg
      181 gcggcccgga gccggacggc cccgggggcc agggccagca gcagcgacgt ctcggtccgg
      241 ccggcgtggg cgtcgccgcc ggcgatccgg ggcgaccagg ccagcaccgc ccggccctcg
      301 gcccgcaacc gggcgaccgc cgccgccagc ggttcggcgt tgccgccgtg acccgacacc
      361 agcacgacgc cggcgaaggc cgatgccgag cggacgagct cgacgacgac cagttcgagg
      421 gccgcggcgc cgatcgagag cgtgccgggg aaggcggcgt gctcgccggc cgagccgtag
      481 ggcagcaccg gggccacgag gacgtcggcc cgggcggcgg ccagccgctc ggccagcgcc
      541 gtggccacgt cggaatcggt ccccagcggc aggtgcggcc cgtgctgttc ggtggagccg
      601 accggcacgg cgaggatcgc cccggccgcg acgctcgccg cctcgggcca ggccagcgcc
      661 gccaggcgac cgccggccac tacccgtcgc tgtccggggc ggcgggcgga gcgcccagcc
      721 ggcggacgaa cccggggggc accagcacgt cggacggcgc cagctcgctg accgagctcc
      781 ggcccagggc cagcagcgcc gagtcgatcc cgttgcggag gatatcgagg acgttctcca
      841 ccccggcctg gccgttggcc gccagacccc agaggtaggc ccggccgatc atcgccgccc
      901 gggcgccgag ggccacggcc ttgacgacgt cgccgccgcg ccggacgccg ccgtcgatga
      961 ccacctcgat gtcgcccccg accgcctcca cgatcggggg cagggcccgg atcgtggccg
     1021 gcgtgccgtc gaggttgttg ccgccgtggt tcgacaccga gatcgccgtg gcgccgacgt
     1081 cgacggcccg gcgggcgtcg tcgacccgca tgatcccctt gagcatcagc ggaccgcccc
     1141 actcctcccg cagccagcgc aggtcgtccc acgacggcgg cggcgtcatc atccattcgc
     1201 cgtaggcggc gaagaacgtc ggcgccggct cgccggccgg cacccagttc gggacggtga
     1261 ggtccggcag cgccttcgtc ttcgcccact gcgccagcca gcggggccgg cgcagcacct
     1321 cgggggcgta ccgcagcacc gccttggcgt cgatgcgctc ggggatgaag gggctgcccc
     1381 agtcccggac gtggacgaac gaccagtcca gcgtcacgag gaggccgacc gccccggccg
     1441 cccgggcccg ctccagccgc tgcagcatcc gctcccggct gccggcccag tagacctgca
     1501 ggaacgtctg ggggttggcc gccaccacct cctcgatcgg cttgctggcg aaggagctca
     1561 ggctcatggc cgtcccccgg gcggcggccg cccgggccac cgccagctcg ccgtcgggat
     1621 gcaccgcctg cacgccggtc ggcgagatga acagcggcat ggagatcggc tggcccatca
     1681 ccaccgtcgc ctgctcccgc ttggccgaca gcccggcgat gtggggggcg aagccgagtt
     1741 ccccgaaggc ggcgacgttg tcggccaggg tgaggccgcg ctccgagccg gcccggatcg
     1801 cctggtgcac cgaggggggc aggcgcttcg ccgcccgccg ctccgcctcg gccaccgact
     1861 cgaaccagtc gccggccatc aacgccgccc gagcgtgacc ggaaccccgg ccggacggga
     1921 gtggtcgggc gagggccggg gcgccgagcc cggctccacc gtcgccagcc gcggttcgcc
     1981 gaaccccttc acgcactcgg ggtcgggccc ggcgatcggc agaccggtga agaacttggc
     2041 cgccatgcac ccgccccggc aggcgtcgta ggccgagcag acgccgcagg ccccggcgga
     2101 ctgcggcccc cgcagcgccc ggaacagctc cgacgaccgc cacaccgcgg cgaagccgcc
     2161 cgcatcccgc acgttgccgg cccggaaggc gtcgtggatg gcgaacgggc aggcgtagac
     2221 gtcgcccacc gggtcgatga ggcacaccac ccgcccggcg ccgcagaggt tgagccccgg
     2281 cagagcctcg ccgtagccgg ccaggtggaa gaaggagtcg ccggtcagca ctcgctcgcc
     2341 gtgggccagg agccaccggt agagctcgtg ctgctgggcc gccgtggggt gcagctcgtc
     2401 ccagacg
//
LOCUS       DATGJT010000123         2970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_742525, whole genome shotgun sequence.
ACCESSION   DATGJT010000123 DATGJT010000000
VERSION     DATGJT010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_742525"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..738)
                     /locus_tag="VKX24_02160"
     CDS             complement(<1..738)
                     /locus_tag="VKX24_02160"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008263 - pyrimidine-specific mismatch
                     base pair DNA N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mismatch-specific DNA-glycosylase"
                     /protein_id="HLJ07314.1"
                     /translation="MPRPDPVDGAPPAPPGLPAAPGGPVPVPGLDFDPRAEPGGWAGL
                     PTALARLSLDVPVGAAVACSVPGGYPAAAPPLAELVAGAGLAVERAGRAGGRQVVGAR
                     RQRTLPDFVGPGMRMLVCGLNPSLIADAGFGYAGPTNRFWTAAVASGVVTVPRRPLAG
                     LAVDLFGMTDLVKRATPNADGLVPEEYRAGADRVRRLVEWLRPGVVLFVGLAGWRAAV
                     DRRAIAGPQPAPFGGAPAYVMPSTSGRN"
     gene            756..2012
                     /locus_tag="VKX24_02165"
     CDS             756..2012
                     /locus_tag="VKX24_02165"
                     /inference="COORDINATES: protein motif:HMM:NF016104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000009 - alpha-1,6-mannosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0004376 - glycolipid mannosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006506 - GPI anchor biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyltransferase family protein"
                     /protein_id="HLJ07315.1"
                     /translation="MPAWGSIREGRRDVPAETDPVVHIVAPPAAGSAPPEDAGAEPAP
                     AATPLLARPLATPLLAYAASRLITTVAVGLAAMASHQSFQRVLTVWDGHWYVRIATVG
                     YPHTVPQGDFYAGTGRQVQSAIAFFPLYPVLVRGLDRVFPGGADVAGAVLSLLIGVLA
                     TVLVWVVAEKVTDRAVADRAAVLFAFSPGAFVLTLVYAEGLLVLLSAAALLALLERRW
                     LAAGVLAALAGATRPNATAVMLACAWAAGVALWRNREWRAVVAPVLSPLGMLAFFAFL
                     WWHTGEALIWFRVESQGWGEGIDFGRSNLGVFADVFTRPLHNPNMLVLAASMIAAAVL
                     MVILVRAKLPAVLNVYALTGLALVLISHINARPRFIFVAFPLVIALAKTTTRRQSAFV
                     VLTAVFAACTVMLTVFYGLHKLNYYP"
     gene            complement(2017..>2970)
                     /locus_tag="VKX24_02170"
     CDS             complement(2017..>2970)
                     /locus_tag="VKX24_02170"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HLJ07316.1"
                     /translation="PWAAPEAGKSLQVGGGTATAAPGSASVPSDASASSTGSAGDSLA
                     AGSPGAVPAPAVGAPVPPGVGPTPAGLGGPPVPDAVAAGTSKVIKNATLTVSLKKGGL
                     GDGYQHAVEAAAAVGGWVQASQTGGDQATVTLQVPSDKLEAVIGQIRGLGKVTAESES
                     GDDVTAEYVDLQARIANWQAQEAVFVGLMAKAKTISETIQIQQQLSTIQEQIEQLQGR
                     QKYLDGHTSYSTVNLTLLEDGAAAKPGPVPGPKPAASTLARAWHRSVGAALAVLGGTL
                     VVLGVVVPLAAVVGLPAWLLAVVLRRRDGRRSTEEPASAQA"
BASE COUNT          334 a         1166 c         1070 g          400 t
ORIGIN      
        1 gttgcggccg ctggtcgagg gcatgacgta ggccggcgcg ccgccgaagg gcgcgggctg
       61 cgggccggcg atcgcccgcc ggtcgacggc cgcccgccag ccggccaggc ccacgaacag
      121 gacgacgccg ggccggagcc attcgaccag ccgtcgcacc cggtccgccc cggcccggta
      181 ctcctccggg acgagcccgt cggcgttcgg cgtggcccgc ttgaccaggt cggtcatgcc
      241 gaaaagatcg acggccaggc cggccagcgg ccggcggggc acggtgacga cgccggaggc
      301 gacggccgcc gtccagaacc ggttggtggg gccggcgtag ccgaagccgg cgtcggcgat
      361 caggctgggg ttgaggccgc agacgagcat ccgcatcccg ggcccgacga agtcggggag
      421 ggtccgctgg cggcgggctc cgacgacctg ccgtccgccg gcgcgccccg cccgctcgac
      481 cgccaacccg gcgccggcca cgagttcggc cagcggcgga gccgcggcgg ggtagccgcc
      541 gggcacggag cacgccacgg cggcgccgac ggggacgtcg aggctgagcc gggccagggc
      601 cgtggggagc ccggcccacc cgcccggctc ggcccgcggg tcgaagtcca gtccgggaac
      661 cgggaccggc cccccgggag ccgccggcag gccgggggga gcgggcgggg ctccgtccac
      721 cgggtcgggg cggggcaccg ttaggctccc ctcccatgcc ggcctggggc tccatccgcg
      781 aggggcgccg agacgtcccc gccgagaccg acccggtggt gcacatcgtc gctccgccgg
      841 ccgccggttc ggcgccgccc gaggacgccg gcgccgaacc ggcccccgcg gccacgccgc
      901 tcctggcccg gccgctggcc acgcccctgc tggcctacgc cgcctccagg ttgatcacca
      961 ccgtggccgt cggcctggcg gccatggcct cgcaccagtc gttccagcgg gttctcaccg
     1021 tgtgggacgg gcactggtac gtccgcatcg ccaccgtcgg ttatccgcac accgtgcccc
     1081 agggcgactt ctacgccggc accgggcgcc aggtgcagag cgccatcgcc ttcttcccgc
     1141 tctacccggt gctggtgcgg ggcctcgatc gggtcttccc gggtggggcc gacgtcgccg
     1201 gcgccgtcct gtcgctcctg atcggcgtcc tggccaccgt gctcgtgtgg gtcgtggcgg
     1261 agaaggtgac ggaccgggcg gtggccgacc gggcggcggt gctcttcgcc ttctcccccg
     1321 gcgccttcgt cctcacgctg gtctacgccg aaggcctcct cgtgctgctc tcggccgccg
     1381 ccctgctggc gctgctggag cggcgctggc tggcggcggg cgtcctggcc gccctggccg
     1441 gcgccacccg gcccaacgcc accgcggtga tgctggcctg cgcctgggcc gccggcgtcg
     1501 ccctgtggcg gaaccgggag tggcgggccg tcgtcgcccc cgtcctctcc ccgctcggga
     1561 tgctggcctt cttcgccttc ctgtggtggc acaccggcga ggcgctgatc tggttccggg
     1621 tcgagtccca gggctggggc gaggggatcg acttcggccg gagcaacctc ggcgtcttcg
     1681 ccgacgtctt cacccggccg ctgcacaacc ccaacatgct cgtgctggcg gccagcatga
     1741 tcgccgccgc ggtcctcatg gtgatcctcg tgcgcgccaa gcttccggcc gtcctgaacg
     1801 tctacgccct gaccggcctc gccctcgtgc tgatctcgca catcaacgcc cggccccgct
     1861 tcatcttcgt ggccttcccg ctggtgatcg ccctggccaa gaccacgacc cgccgccagt
     1921 cggccttcgt ggtcctgacg gcggtcttcg ccgcctgcac ggtgatgctc accgtcttct
     1981 acgggctcca caagctcaac tactacccgt aagccgtcac gcctgggccg acgcgggctc
     2041 ctccgtgctc cgccggccgt cccgccggcg gagcaccacg gccagcagcc aggccgggag
     2101 cccgacgacc gccgccagcg gcacgacgac gcccagcacc accagcgtcc cgcccagcac
     2161 ggcgagggca gcaccgaccg agcggtgcca cgcccgggcc agcgtcgacg ccgccggctt
     2221 cggcccgggc accggtccgg gcttggccgc ggcgccgtcc tccagcagcg tcaggttcac
     2281 cgtcgagtac gaggtgtggc cgtcgaggta cttctgccgg ccctggagct gctcgatctg
     2341 ctcctggatc gtcgacagct gctgctggat ctggatcgtc tcggaaatcg tcttggcctt
     2401 ggccatgagc ccgacgaaga ccgcctcctg agcctgccag ttggcgatcc gggcctggag
     2461 gtcgacgtac tcggcggtga cgtcgtcgcc gctctcggac tccgccgtca ccttgccgag
     2521 gccccggatc tgcccgatga cggcctcgag cttgtcggac gggacctgca gcgtgaccgt
     2581 cgcctggtca ccgccggtct gcgacgcctg aacccatccg ccgacggcgg cggccgcctc
     2641 gacggcatgc tggtaaccgt cgccgaggcc gcccttcttc aggctcacgg tcagcgtggc
     2701 gttcttgatg accttcgagg tgccggcggc gacggcatcg ggaacgggcg gccctccgag
     2761 accggcgggc gtggggccga ccccgggcgg gaccggcgcc ccgacggccg gcgccgggac
     2821 ggcaccgggc gaaccggcgg ccagcgagtc gcccgcggag cccgtcgagg aggcggaggc
     2881 gtccgacggc accgacgccg accccggggc cgccgtcgcc gtcccgccac ccacctgcag
     2941 gctcttcccg gcctcgggag cggcccacgg
//
LOCUS       DATGJT010000124         2371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_16423, whole genome shotgun sequence.
ACCESSION   DATGJT010000124 DATGJT010000000
VERSION     DATGJT010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16423"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2371
                     /gene="carB"
                     /locus_tag="VKX24_02175"
     CDS             <1..>2371
                     /gene="carB"
                     /locus_tag="VKX24_02175"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020887722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HLJ07317.1"
                     /translation="FGELIARGLELSPTHEVLIEESAIGWKEFELEVMRDCADNVVIV
                     CSIENFDPMGVHTGDSITVAPAQTLTDKEYQRMRDATIAIMREIGVETGGSNVQFAIN
                     PRTGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDEIANDITLKTPACF
                     EPSIDYVVVKVPRWAFEKFPDADHRLGTQMKSVGEAMAIGRTFPEALQKALRSLESGR
                     AGLGHDGAGTGIETMSRDEVLAAVRVPTEDRLFLLERATRLGIPVEELNRATGIDPWF
                     LAQIEALQGLAGELSEAGKRSGTGDLERRLLRRAKRAGYSDAQLGVLTGRGEAAVRRG
                     RLAAGLAPTFKTVDTCAAEFAAMTPYYYSTYEDEDELADSHRKSVVILGSGPNRIGQG
                     IEFDYCCVHAALAIRDSGYDAVMVNCNPETVSTDYDISTRLYFEPLTFEDVMAVVERE
                     QPIGVIVTLGGQTPLKLAVPLAAAGVPVLGTPPDAIDRAEDRGRFTTLLSELGIAQAP
                     GGMATSLAEAREVVHRIGYPVLVRPSYVLGGRAMEIVYADEALERYLANAVRASAAHP
                     VLIDRFLEDAIEVDVDAVCDGTDVYIGGILEHIEEAGVHSGDSACVIPPHSLAPEVIG
                     EIVRGMDQLSRALGVVGLINAQWAVKDGAVYCLEVNPRASRTVPFVGKATGVPLAKVA
                     VRVMLGEKLATIPLLPPRPVGARDGGSARDGGGAGGVPVWWGHELMDHVAVKEAVLPF
                     GRFPGVDTLLGPEMRSTGEVMGIDVGFGTACAKSQEAAYGALPTKGRVFV"
BASE COUNT          360 a          800 c          864 g          347 t
ORIGIN      
        1 agttcggcga gctcattgcc cgcggtttgg agctcagccc cacccacgaa gttctcatcg
       61 aagagtccgc gatcggctgg aaggagtttg agctggaggt gatgcgcgac tgcgccgaca
      121 acgtcgtcat cgtctgctcg atcgagaatt tcgacccgat gggggtgcac acgggcgatt
      181 cgatcaccgt cgccccggcg caaacgctca ccgacaagga ataccagcgg atgcgggacg
      241 ccacgatcgc catcatgcgc gagatcggcg tcgaaacggg gggctcgaac gtgcagttcg
      301 cgatcaaccc ccgcaccggc aggatggtcg tcatcgagat gaatccgcgc gtcagccgct
      361 caagcgcttt ggcctccaag gcgaccgggt tcccgatcgc caagatcgct gccaagctgg
      421 cgatcggcta cacgctggac gagatcgcca acgacatcac gctgaagacc ccggcctgct
      481 tcgagccctc gatcgactac gtcgtggtca aggtgccccg ctgggcgttc gagaagttcc
      541 ccgatgccga ccaccgcctc ggcacccaga tgaagtcggt cggcgaggcg atggcgatcg
      601 ggcggacctt cccggaggcc ctgcagaagg cgttgcggtc actggagagc ggccgggccg
      661 ggctgggcca cgacggtgcc ggcaccggga tcgagacgat gtcgcgggac gaggtcctgg
      721 cggcggtccg ggtgcccacc gaggaccggc tgttcctcct ggagagggcg acgcggctgg
      781 gcataccggt cgaggagctg aaccgggcga ccgggatcga cccctggttc ctggcccaga
      841 tcgaagcgct ccagggcctc gccggcgagc tgtcggaggc gggcaagcgg tcggggacgg
      901 gcgacctgga acgccggctg ctgcgccgcg ccaagcgcgc cggctactcc gatgcccagc
      961 tgggggtgct gaccggccgg ggcgaggcgg ctgtacggcg gggccggctg gccgccggcc
     1021 tggcgccgac gttcaagacg gtcgacacct gcgcagcgga gttcgctgcc atgaccccct
     1081 actactactc gacctacgag gacgaggacg aactcgccga ctcccaccgg aagtcggtgg
     1141 tgatcctggg gtccggtccc aaccgcatcg ggcagggcat cgaattcgac tactgctgcg
     1201 tgcacgccgc cctggcgatc cgcgattccg gctacgacgc ggtgatggtc aactgcaacc
     1261 cggagacggt ctcgaccgac tacgacatct cgacgaggct ctacttcgag ccgctgacct
     1321 tcgaggacgt gatggcggtc gtcgaacggg agcagccgat cggggtgatc gtcaccctgg
     1381 gtgggcagac cccgctcaaa ctggccgtgc cgctggccgc cgccggggtc cccgtgctcg
     1441 gcacaccccc ggacgccatc gaccgggccg aggaccgcgg tcggttcacc accctgctgt
     1501 cggagttggg gatcgcccag gcccccgggg ggatggccac ttcgcttgcc gaggcccggg
     1561 aggtcgtcca ccggatcggg tacccggtgc tggtccggcc ctcgtacgtc ctcgggggcc
     1621 gggcgatgga gatcgtctac gccgacgagg cgctggagcg gtacctcgcc aacgcggtgc
     1681 gcgcctccgc cgcccacccg gtgctgatcg accgcttcct cgaggacgcc atcgaggtcg
     1741 acgtcgacgc ggtgtgcgac gggaccgacg tctacatcgg cggcatcctg gagcacatcg
     1801 aggaggccgg ggtccactcc ggcgactcgg cctgcgtcat cccgccccac tcgctggccc
     1861 cggaggtcat cggcgagatc gtccggggca tggaccagct ctcccgggcg ctcggcgtcg
     1921 tcggcctgat caacgcccag tgggcggtca aggacggggc cgtctactgc ctggaggtca
     1981 acccgcgggc ctcgcggacg gttcccttcg tcggcaaagc gaccggcgtc ccgctggcca
     2041 aggtggcggt ccgggtgatg ctgggcgaga agctggcgac gatcccgctg ctgccgccgc
     2101 gcccggtggg cgcccgggac ggagggagcg cccgggacgg agggggcgca gggggcgtcc
     2161 cggtgtggtg gggccacgag ctcatggacc acgtggcggt caaggaggcg gtcctgccgt
     2221 tcggccgctt cccgggcgtc gacacgctgc ttggcccgga gatgcgctcg accggcgagg
     2281 tgatgggcat cgacgtcggg ttcggcaccg cgtgcgcgaa gtcgcaggag gcggcctacg
     2341 gcgcgctccc gaccaagggt cgggtgttcg t
//
LOCUS       DATGJT010000125         2718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1156850, whole genome shotgun sequence.
ACCESSION   DATGJT010000125 DATGJT010000000
VERSION     DATGJT010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1156850"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VKX24_02180"
     CDS             complement(<1..413)
                     /locus_tag="VKX24_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019877188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLJ07318.1"
                     /translation="MLHHLDGYVALAGLIVGFTVGLTGMGGGALMTPILVLLFKVQPL
                     AAVSSDLVAAVVMKPIGGAVHLRRGTVNKRLVGWLAAGSMPSAFAGVLILRRLGNGAG
                     VQNNIKIALGVALLVAVGTMIVRALLDVRRRAVKGR"
     gene            complement(633..1100)
                     /locus_tag="VKX24_02185"
     CDS             complement(633..1100)
                     /locus_tag="VKX24_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014058908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLJ07319.1"
                     /translation="MRISVKVDYAVRAMVQLAAVSSEEPVKADTVARAQDIPLKFLLG
                     ILSDLKRAHLLRSQRGAEGGYWLARPAEEISLADVIRAIDGPLANVHDTSLGALAYPG
                     PAEHLREVWMAVRTSLRSVLEVVSLADLAKGELPGRVQALATEYEADVRTYQT"
     gene            complement(1173..>2718)
                     /locus_tag="VKX24_02190"
     CDS             complement(1173..>2718)
                     /locus_tag="VKX24_02190"
                     /inference="COORDINATES: protein motif:HMM:NF037016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HLJ07320.1"
                     /translation="PPPAGGGNGAGAGGGAAPAPAPPPPAIQAADDSADGKEDAPLTI
                     DVLANDKAPDGDGPLTLQSVGPPQHGQAQVADNHVAYQPAACYQGPDTFTYTVTDAKG
                     ASATATVHVTLAHVNHKPEAVDDAATITDGGPVTIDVTANDKGLCDGVKSVTVVKSPA
                     HGSATVGPDEKVGYTPAGGFNGTDAFEYRVTDTDGESSTAKVTVTVGGAATGAPVAVD
                     DSLTTRSGRQTPIDVTKNDNVPGGVKEVRFAGADGAPTDDAELGTGAGGMARRSGARI
                     SYTAPAGTFTGSDSFTYVVVDNAGNASKPATVRVTVVTNKPPQVKDGWVAVPQNRQAA
                     GSIAKLGWDPEKDAITFALRSTPAGQLTLRPDGSFLYQAPAGVDVDAFSFVANDGNSD
                     SNEGHVTIQITQGQAASASSTTTTASSAPKSWTSTTTTAPKSSTATTAKPSGGTTPTS
                     AAKGKKAPSSNNRGKPTTTKSASTQSTTQSTTRSTSPKHKSKGWLVPVLPLAAVPALT
                     RRRRRR"
BASE COUNT          322 a          921 c         1048 g          427 t
ORIGIN      
        1 cggcccttga ccgcccggcg gcggacgtcg agcagagccc ggacgatcat cgtccccacg
       61 gccaccagca gggcgacccc gagggcgatc ttgatgttgt tctggacccc ggcgccgttg
      121 cccagccggc gcaggatgag gacgccggcg aaggccgacg gcatcgaccc cgccgccagc
      181 cagccgacga ggcgcttgtt gaccgtgccc cgccggaggt ggacggcgcc gccgatcggc
      241 ttcatcacca ccgcggccac gaggtcgctc gacaccgccg ccagcggctg caccttgaac
      301 aggaggacga ggatcggcgt catgagggcg ccgccgccca tgcccgtcag cccgacggtg
      361 aacccgacga tgagcccggc cagggccacg tagccgtcga ggtggtggag catgcgggcc
      421 tcccggggat ccgaaggcgc cgctccggcc cttcgatttt gttgatcatc ttgactcaga
      481 tggtcgacaa gatagctaaa gggcggctga gcggcaggga agagtgggct gaaggagttt
      541 tcggcgctcc cggcgccggt tccccctcgg cagcgggatt tgtcgactaa gtcgaccgac
      601 ttacgtgtga gactcgccgg gtgtgtgccg gtttacgtct ggtacgtgcg gacgtcggcc
      661 tcgtactccg tcgccagcgc ctgcacccgg ccgggcagct cgcccttggc caggtcggcc
      721 aggctcacca cctcgagcac cgaccgcagg ctcgtccgca ccgccatcca gacctcgcgg
      781 aggtgctcgg cggggccggg gtaggccagc gcgccgaggc tcgtgtcgtg gacgttggcc
      841 aggggcccgt cgatggcccg gatgacgtcg gccagagaga tctcctcggc gggacgggcc
      901 agccagtagc caccctcggc gccccgctgg ctgcggagga ggtgggcccg cttcaggtcg
      961 gagaggatgc cgagcaggaa cttgagcggg atgtcctggg cccgggcgac ggtgtcggcc
     1021 ttcaccggtt cctcggacga gacggcggcc agctgcacca tcgcccggac ggcgtaatcg
     1081 accttcaccg agatgcgcac tcccccagtc tgtcgcagtt gccggcccgg cgggcgcacc
     1141 gggcgggctc gcccgacccc cggcgccccg ggtcagcgcc ggcggcggcg gcgggtcagc
     1201 gccgggacgg cggccagcgg cagcaccgga accagccacc ccttggactt gtgcttgggc
     1261 gacgtcgacc gcgtcgtgga ctgggtagtc gactgggtcg aggcggactt cgtcgtcgtg
     1321 ggcttgcccc ggttgttgga gctcggcgcc ttcttcccct tggcggccga ggtgggagtc
     1381 gtgccgcccg acggcttcgc cgtcgtcgcc gtggaggact tcggagccgt cgtcgtggtg
     1441 ctcgtccagg acttcggcgc cgaggaggcc gtggtggtcg tcgacgacgc cgacgccgcc
     1501 tggccctggg tgatctggat ggtcacgtgg ccctcgttgg agtccgagtt cccgtcgttg
     1561 gccacgaagc tgaaggcgtc gacgtcgacg ccggccggcg cctggtagag gaagctcccg
     1621 tcgggccgca gcgtgagctg cccggccggg gtcgagcgca gggcgaaggt gatggcgtcc
     1681 ttctccgggt cccacccgag tttggcgatg gagccggcgg cctggcggtt ctgcggcacg
     1741 gccacccacc cgtccttgac ctggggaggc ttgttggtca ccaccgtgac ccggacggtg
     1801 gccggcttgc tggcgttccc ggcgttgtcg acgacgacat aggtgaagga gtccgagccg
     1861 gtgaaggtcc ccgccggcgc ggtgtaggag atgcgggccc cgctgcgccg ggccatgccg
     1921 ccggcgcccg tgccgagctc ggcgtcgtcg gtcggagcgc cgtcggcgcc ggcgaaccgg
     1981 acctccttga cgcccccggg cacgttgtcg ttcttggtca cgtcgatggg tgtctgccgg
     2041 ccggagcggg tcgtgaggct gtcgtcgacg gccaccggcg ctccggtggc ggcgccgccg
     2101 acggtcaccg tgaccttggc cgtggacgac tcgccgtcgg tgtcggtgac ccggtactcg
     2161 aaggcgtcgg tgccgttgaa gccaccggcc ggcgtgtagc cgaccttctc gtcggggccg
     2221 acggtggccg agccgtgggc cgggctcttg acgacggtga cgctcttgac gccatcgcac
     2281 aggcccttgt cgttggcggt gacgtcgatg gtgacgggcc cgccgtcggt gatcgtggcg
     2341 gcgtcgtcga ccgcctccgg cttgtggttg acgtgggcca gcgtcacgtg cacggtcgcc
     2401 gtcgccgagg cgcccttggc gtcggtcacg gtataggtga acgtgtcggg gccctggtag
     2461 cacgccgccg gctggtaggc gacgtggttg tcggccacct gggcctggcc gtgctggggc
     2521 gggcccacgc tctggagggt gagcgggccg tcgccgtcgg gggccttgtc gttggccagg
     2581 acgtcgatcg tgagcggggc gtcctccttg ccgtcggccg agtcgtcggc ggcctggatg
     2641 gcgggagggg gcggcgcggg agcgggagcg gctcctccgc cggcgccggc gccgttgccg
     2701 ccgccggccg ggggcggc
//
LOCUS       DATGJT010000126         2488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1469135, whole genome shotgun sequence.
ACCESSION   DATGJT010000126 DATGJT010000000
VERSION     DATGJT010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1469135"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..1655)
                     /locus_tag="VKX24_02195"
     CDS             complement(183..1655)
                     /locus_tag="VKX24_02195"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLJ07321.1"
                     /translation="MTDILSAGRSSAADPRRGIPGRHHGGMDVPQPPVPSPLVGDGLP
                     VPCLDGRERPYLNLDSAASASALPAVARRVEEFLPWYSSVHRGAGYKSRLATNAYEEA
                     RLAALRFAGRPDGGDDIAVIVRNTTEAINHLAYRLPLGPDDEIVTTVVEHHAMLLPWG
                     RRCRRRFVECGPDGTFTVDDVVAALDASPRPKLLAVTGASNVTGWLPPLDAILAAARE
                     RGIPVAVDAAQLAPHRPLPPAADYIAWSGHKMYAPYGAGVLIGPRATFAEGDPFLAGG
                     GAVDLVDLDEVSWTDPPEREEAGSPNVIGAVALHEAFAEFDRLGWKAIIEHDDSLVGP
                     LRSGLAAIPGVRVLGPPASEPTLPLATFTLDGVHHALVAARLSAEYGIGVRHGCFCAH
                     PYLLRLLDLDPQQVAEYRAAVLRHDRREMPGAVRASAGLSTSAADVERFLAAVAEIAG
                     GRPAPVGYVQDPSTGDFWPEGSAPGWTDDDRSLGASCARG"
     gene            1654..>2488
                     /locus_tag="VKX24_02200"
     CDS             1654..>2488
                     /locus_tag="VKX24_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07322.1"
                     /translation="MPRFSRTRLAASLGVVALAGLLAALPVGAQTGTITTVAGKSPPG
                     YSGDGGQARDAQMNEPRMLTFDGTGTMYIVDTFNQVVRRVGTDGVITTVAGHNTGFVP
                     RDDAECKANFSGEGVPATEATLSCPHAAAVAANGDLFIADSANHVIRRVDHATQVITT
                     IAGQGGRSGDSGDGGPARQARITGPKGIIFDRNWNLIIADSGNDRIRRVDVRTGIITT
                     IAGTGVTGESGDGGPATQAKLDEPRTMALAADGSILFTEPRVNRVRRISPDGIISTFA
                     GT"
BASE COUNT          351 a          901 c          950 g          286 t
ORIGIN      
        1 ctcgttcgtc ctcggccgcg gcggcggctg atccacccgg catcgccacc tcggagcggt
       61 ccgttcgggc ttttgggggg cgtgacgcac cgccagcgtg cgccacgccc tccaaaagct
      121 gtcggaggca agcagcgcag agtccgggtc ctgatcggtt ggcgtaagac gggtgatgcc
      181 cgtcagccgc gggcgcagga ggcgccgagg ctgcggtcgt cgtcggtcca gcccggggcc
      241 gagccctcgg gccagaagtc gccggtggac gggtcctgca cgtaaccgac gggcgccggc
      301 cggccgccgg cgatctcggc cacggcggcc aggaaccgct cgacgtcggc cgccgacgtc
      361 gacagcccgg cgctggcccg taccgccccg ggcatctccc gccggtcgtg gcgcaggacg
      421 gcggcgcggt attccgccac ctgctgcgga tcgaggtcga ggagccgcag caggtagggg
      481 tgggcgcaga agcagccgtg gcggacgccg atgccgtact ccgccgacag ccgggcggcc
      541 acgagcgcgt ggtgcacgcc gtcgagcgtg aaggtggcca gcggcagcgt cggctccgac
      601 gccggcggcc cgaggacccg gacgccggga atggcggcca ggccgctccg cagcggcccg
      661 acgagcgaat cgtcgtgttc gatgatcgcc ttccagccca ggcggtcgaa ctcggcgaag
      721 gcctcatgga gggccaccgc cccgatgacg ttgggggagc cggcctcctc ccgctccggg
      781 gggtcggtcc acgacacctc gtcgaggtcg acgaggtcga cggcgccgcc gccggccagg
      841 aaggggtcgc cctcggcgaa ggtggcccgg ggcccgatga ggacgccggc gccgtagggg
      901 gcgtacatct tgtgcccgct ccaggcgatg tagtcggccg ccggcggcag cggccggtgg
      961 ggagcgagct gggcggcgtc gacggccacc gggatccccc gctcccgggc cgcggccagg
     1021 atggcgtcga gcggcggcag ccagccggtg acgttcgacg ccccggtgac ggccagcagc
     1081 ttggggcggg gggaggcgtc gagggcggcg acgacgtcgt cgaccgtgaa ggtcccgtcg
     1141 ggcccgcact cgacgaagcg gcgccggcag cgccggcccc agggcagcag catggcgtgg
     1201 tgctcgacga cggtggtgac gatctcgtcg tcgggcccga gcggcagccg gtaggcgagg
     1261 tggttgatcg cctcggtggt gttgcggacg atgacggcga tgtcatcgcc gccgtccggc
     1321 ctcccggcga agcgcagggc ggccaggcgg gcctcctcgt aggcgttggt ggccagccgc
     1381 gacttgtagc ccgccccccg gtggacgctg gagtaccagg gcaggaactc ctcgacccgc
     1441 cgggccacgg ccggcagggc gctggccgag gcggccgagt cgaggttgag gtagggccgc
     1501 tcccgtccgt cgagacaggg gacggggagg ccgtcaccga ccagcgggga gggaacgggg
     1561 ggctggggaa cgtccatccc gccatgatgc cgccccggga tgccgcggcg ggggtccgcc
     1621 gccgaagacc gcccggccga cagaatgtcc gtcatgcccc ggttctcccg cacccggctg
     1681 gcggcgtcgc tcggcgtcgt ggcgctggcg ggtctcctgg ctgcgctgcc ggtcggcgcc
     1741 cagacgggga cgatcaccac cgtggccggc aagagccccc ccgggtactc cggcgacggc
     1801 ggccaggccc gcgacgccca gatgaacgag ccccgcatgc tgaccttcga cggcacgggg
     1861 acgatgtaca tcgtcgacac cttcaaccag gtcgtccggc gggtcgggac cgatggcgtc
     1921 atcacgacgg tcgccgggca caacacgggc ttcgtgcccc gcgacgacgc cgagtgcaag
     1981 gcgaacttca gcggtgaagg cgtccccgcc accgaagcca cgctgagctg cccccacgcc
     2041 gcggcggtgg cggccaacgg cgacctgttc atcgccgaca gcgccaacca cgtcatccgc
     2101 cgggtcgacc acgccacgca ggtcatcacg acgatcgccg gccagggcgg ccgcagcggc
     2161 gacagcggcg acggcggccc ggcgcgccag gcccgcatca ccgggccgaa gggcatcatc
     2221 ttcgaccgca actggaacct gatcatcgcc gactccggca acgaccggat ccgcagggtc
     2281 gacgtccgca ccgggatcat caccacgatc gccgggacgg gcgtgaccgg cgagagcggc
     2341 gacggcggcc cggccaccca ggccaagctc gacgagcccc gcacgatggc gctggccgcc
     2401 gacggctcga tcctcttcac cgagccccgg gtcaaccggg tccggaggat ctccccggac
     2461 gggatcatct ccaccttcgc cggcaccg
//
LOCUS       DATGJT010000127         3843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_950811, whole genome shotgun sequence.
ACCESSION   DATGJT010000127 DATGJT010000000
VERSION     DATGJT010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3843
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950811"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..2229)
                     /locus_tag="VKX24_02205"
     CDS             complement(64..2229)
                     /locus_tag="VKX24_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07323.1"
                     /translation="MPGRLALRGVVAAAAVAGSTAAVALAPAAGAATRPPVRRVLILS
                     LPGTTWADIAGADVPNLKHLLAGAAVGSTSVRAVTKETDPGDGYATIGAGTAVAGPAR
                     LEGLAFNAAECREPPGGIEEECRRSPVTETRAIVSVAIPELARDARHQHRGAEIGALG
                     TALARAGVDRAVVGNADTALRSDDPRTFHREAALALADGHGAVQYGQMDRRLLAEDGA
                     ALHLDPVLTLQAFERAWDDAGRTVVLLEASDLVRAHRDALRATDRLIGQVLADVDFER
                     DAVIVTGPSDPWDGVHLTVAALRAPGVRPGLLDSATTRRAGYVTLPDLAPTVLDLLGL
                     PRPDSMEGRAYDVHPRSWTAPPVARFVEADREARFRDRMLGPVAGTYVAVEILLSLVV
                     AFVLARLPGRRRLRRALDFVGLWLLAVVPLTFLGAVLDLDSVGPYLALVIGGGVVLAA
                     GALALRGTIRPLVALLGLLLAFHVVDIVTGGHLQISTVFGYSPTVGGRFAGFGNLTYA
                     QVAAAAVLLAGLLAHLLGGRRGVTAAAAVLAVALLADGMPFWGSDVGGVLSSVPTFAL
                     VLLGLSGVRMSWRRAAALGAGTVAAVIALGFLDLRRPAGDRTHLGRLFEQMGHQGLQP
                     FSDAVQRKVSENLSVLPTSIWIPLVPSVLAFIAWLAYGSSPRLEAIRHRAPEMRPAFV
                     GVLVAAVLGMALNDSGIAVPAMMLGVLNPVVVRLALADS"
     gene            2248..2682
                     /locus_tag="VKX24_02210"
     CDS             2248..2682
                     /locus_tag="VKX24_02210"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019431789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HLJ07324.1"
                     /translation="MSPEDAAAAVEPVRAAGGVVWRRDGDGTVRVLVVHRPRYDDWSL
                     PKGKCDRGESDEDCALREVREETGLTCRLGAELPSTRYRDNKDRDKVVRYWAMEPVAD
                     DGFTPNAEVDDLRWLAAPEALRLLSYAHDRPVLEALDRGRPA"
     gene            2813..>3843
                     /locus_tag="VKX24_02215"
     CDS             2813..>3843
                     /locus_tag="VKX24_02215"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ07325.1"
                     /translation="MRSAESRRRLAAAAVCLVVAAGCGQKAGVGGPDPSGAPVAAAAP
                     VAPPAAGAAPPSADATSPGGALPLDLPQRSGAPAASGPATAVPDSPTRSSGPASRASS
                     ASARPAAAAGPAGPGIPGLSPTSTTAPGPAVAVAGPHDRDGVSDKEIVIGIHAPLTGA
                     APVPEDSVDKAKDLYWRWLADRGGIFGRNVRIVFRDDQYNPSRAVTVCRELVEQEHAF
                     LLIGVGTDQVVSCARYASQAGVPYISSGGGQAAVAGLANYFAISMSFPQQAPLVAQAV
                     KRAGKTKVAVVVINTPNYDDTFASLVQSVRDVGLTLVRADRIGKQASQSEVLAEANNL
                     RVSGAEAVVL"
BASE COUNT          542 a         1440 c         1441 g          420 t
ORIGIN      
        1 cgggctcgtc cactgtcccg ccctgcggct gggctcctgg cgcttcaccg gaggggcgag
       61 aggctaggag tcggccaacg ccagcctcac gacgacgggg ttgaggacgc cgagcatcat
      121 ggccggtacg gcgatgccgg agtcgttgag ggccatgccg aggacggcgg cgacgagcac
      181 gccgacgaag gcgggccgca tctccggagc ccggtgccgg atggcctcca gccggggtga
      241 cgacccgtag gccagccagg cgatgaaggc cagcaccgac ggcacgagcg ggatccagat
      301 cgacgtcggg agcaccgaca ggttctcgga gaccttgcgc tggacggcgt cgctgaacgg
      361 ctgcagcccc tggtggccca tctgctcgaa caggcggccg aggtgggtcc ggtcgccggc
      421 cgggcggcgg aggtcgagaa accccagggc gattacggcg gccaccgttc cggcgcccag
      481 cgccgccgcc cgccgccagg acatcctgac cccgctgagt cccagcagca cgagggcgaa
      541 cgtcgggacc gaagagagga ccccgccgac gtccgagccc cagaacggca tcccgtcggc
      601 cagcagcgcc acggccagga cggcggcggc ggcggtgacg ccccgtcggc cgccgaggag
      661 gtgggccagg agcccggcga ggagcacggc ggccgccgcc acctgggcgt aggtgaggtt
      721 gccgaagccg gcgaagcgcc cgccgaccgt gggggagtag ccgaacacgg tgctgatctg
      781 gagatgcccg ccggtgacga tgtcgacgac gtggaaggcc agcaggagcc cgaggagcgc
      841 caccagcggc cgtatcgtgc cccgcagagc cagcgctccg gcggcgagca cgacaccccc
      901 gccgatgacc agcgccaggt acggcccgac gctgtcgagg tcgagcaccg ccccgaggaa
      961 cgtgagcggc accacggcca ggagccagag cccgacgaag tccagcgccc ggcgcagccg
     1021 ccgccggccg gggaggcggg ccaggacgaa ggcgacgacc agcgacagca ggatctcgac
     1081 ggccacgtag gtgccggcca ccgggccgag catgcgatcc cggaaccggg cctcgcggtc
     1141 ggcctcgacg aagcgggcca ccggcggcgc cgtccacgac cggggatgca cgtcgtaggc
     1201 ccggccctcc atggagtccg gccgggggag gccgagcagg tcgaggacgg tgggggccag
     1261 gtccggcagc gtgacgtagc cggcccgccg ggtcgtggcc gagtccagca gccccggccg
     1321 caccccgggc gcccgcaacg ccgcaacggt gagatgcacg ccgtcccagg gatcggacgg
     1381 cccggtgacg atgacggcgt cccgctcgaa gtcgacgtcc gccagcacct gcccgatcag
     1441 ccgatccgtc gcccggagcg cgtcacgatg ggcgcggacc aggtccgacg cctccagcag
     1501 gaccaccgtc cgaccggcgt cgtcccacgc ccgctcgaag gcctgcagcg tgagaaccgg
     1561 gtcgagatgg agcgcggcgc cgtcctcggc gaggaggcgc cggtccatct ggccgtactg
     1621 cacggcgccg tggccgtcgg ccagcgccag tgccgcctcc cggtggaagg tgcggggatc
     1681 gtccgaccgc agcgcggtgt cggcattgcc cacgacggcc cggtcgacgc cggcgcgggc
     1741 cagcgccgtg ccgagggcgc cgatctcggc gccgcggtgc tggtgccggg cgtcccgggc
     1801 cagctcgggg atggcgactg agacgatggc gcgggtctcc gtgaccgggg accggcggca
     1861 ctcttcctcg atcccgcccg ggggctcacg gcactcggcg gcgttgaacg ccaggccctc
     1921 gagccgagcg ggcccggcga ccgccgtccc ggcgccgatg gtggcgtacc cgtcgccggg
     1981 gtcggtttcc ttcgtgaccg cccgaaccga cgtgcttccg acggcggcgc cggcgaggag
     2041 gtgcttcagg ttgggcacgt cggcgccggc gatgtcggcc caggtcgtcc cgggcagcga
     2101 gaggatcagc acccgccgca ccggcggacg ggtggccgcg cccgccgccg gcgccagggc
     2161 cacggcggcg gtggaccccg ccacggcggc ggctgcgacg acaccgcgga gtgcaaggcg
     2221 cccgggcatg gccatagcct ctcgcgaatg tccccggaag acgcggcagc ggcggtggaa
     2281 ccggtccggg ccgccggcgg ggtcgtctgg cgacgggacg gcgatggcac ggtgcgggtt
     2341 ctcgtcgtgc accgcccccg ctacgacgac tggtcgctcc cgaagggcaa gtgcgaccgg
     2401 ggcgagagcg acgaggactg cgccctgcgg gaggtgcggg aggagaccgg cctcacctgt
     2461 cggctcgggg ccgaactgcc ctccacccgc taccgcgaca acaaggaccg ggacaaggtc
     2521 gtccggtact gggccatgga gccggtcgcc gacgacgggt tcacccccaa cgccgaggtc
     2581 gacgacctcc gctggctggc ggcgccggag gcgctgcgcc tgctgtccta cgcccacgac
     2641 cgccccgtcc tggaggccct cgaccgcggc cgccccgcct gagtccgccg aaatcggatc
     2701 ggccagtcac gtgcggttcc cgcaccggcg ttcataacga acagggggtg ttcgccagga
     2761 acgccggtct gccgagagca ctcgcaccgt cccggtcggt attgtcggcc cggtgcgttc
     2821 cgccgagtcc cgccgtcgcc tcgcggccgc cgccgtgtgc ctggtggtcg cggccggctg
     2881 cgggcagaag gccggagtcg gcgggcccga cccgtccggc gctccggtcg ccgccgccgc
     2941 accggtcgcc ccgccggcgg ccggcgccgc gcccccgtcc gccgacgcca cgagtcccgg
     3001 cggcgccctg ccgctcgatc tcccgcagag atcgggggcg ccggcggcga gcggcccggc
     3061 aacggccgtc cccgactccc ccacccggtc gagcggaccg gcctcgcggg cgagctccgc
     3121 atccgcccgt cccgcggcgg ccgcgggccc tgccgggccg ggaatccccg gcctgtcgcc
     3181 gacctccacc acggcccccg gcccggccgt ggccgtcgcc ggtccccacg accgcgacgg
     3241 cgtgtccgac aaggagatcg tgatcggcat ccacgccccg ctgaccgggg cggcgcccgt
     3301 gcccgaggac agcgtcgaca aggccaagga cctctactgg agatggctcg ccgaccgggg
     3361 cggcattttc ggccgcaacg tgcggatcgt cttccgggac gaccagtaca acccgtcgcg
     3421 ggcggtcacc gtctgccggg agctggtcga gcaggaacac gccttcctcc tgatcggggt
     3481 cggcaccgac caggtcgtct cctgtgcccg ctacgccagc caggcgggcg tgccctacat
     3541 ctcgagcggc ggcggccagg cggcggtggc cggcctggcc aactacttcg ccatctccat
     3601 gagcttcccg cagcaggcac ccctggtggc gcaggcggtc aagcgggccg gcaagaccaa
     3661 ggtggccgtc gtcgtcatca acaccccgaa ctacgacgac accttcgcca gcctcgtcca
     3721 gtcggtcagg gacgtcggcc tcaccctggt tcgggccgac cggatcggca agcaggcgtc
     3781 gcagtcggag gtcctggccg aggccaacaa cctccgggta tccggggccg aggcggtcgt
     3841 gct
//
LOCUS       DATGJT010000128         2746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_743294, whole genome shotgun sequence.
ACCESSION   DATGJT010000128 DATGJT010000000
VERSION     DATGJT010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743294"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VKX24_02220"
     CDS             complement(<1..351)
                     /locus_tag="VKX24_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015622171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ07326.1"
                     /translation="MRFAIWPAPTRPYDDILELVTHCEATGWDGVYFADHFMPNGPGE
                     AATDGDTLECWSVIAALAATVPRLRISPLVTSVTYRHPAVLAKIAAAVDRISNGRLLL
                     GVGAGWQENEHAAYG"
     gene            428..1228
                     /locus_tag="VKX24_02225"
     CDS             428..1228
                     /locus_tag="VKX24_02225"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006541672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HLJ07327.1"
                     /translation="MPPSKRPAAGSTGRWAGVELSGKVAVVTGGSRGIGRAVAEGLAA
                     AGADVVVASRKLDACEAAAAEIEKATARRAVPLACNVSHWDQCDRLVQETYDAFGHCE
                     ILVNNAGLSPLYPDLASVSEELYDKTHAVNAKGPFRLSVLFGTRMHGAAGGSIINVSS
                     VSSWRPGVNELPYAMAKAGLNALTLGLAGAFSPNVRANVVLPGPYETDIAKAWAPGAI
                     EQMSRMNPLRRVGQPADLVGICVFLASDAASYVNGAQILVDGGAARTL"
     gene            1285..1938
                     /locus_tag="VKX24_02230"
     CDS             1285..1938
                     /locus_tag="VKX24_02230"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ07328.1"
                     /translation="MDSDPSSTGHAVEELARDGATMAEAASVAAAAFHDDPFFIFLSP
                     NERLRRRGLVIYTRGLLGSLGDRGLVLGVRGAGGRILGVAAFVKPGSYPLPAGAQVRQ
                     AGAAFWALLPRPPALVSGSRYLLAIDRAHPHGELWYLALLVVDPAAQRSGVGGALQQH
                     VYRDADAEQVPSYLETQKEANLAYYRRFGYELVQELRPVRRGPPLWTMRREPRPPAG"
     gene            complement(1956..2516)
                     /locus_tag="VKX24_02235"
     CDS             complement(1956..2516)
                     /locus_tag="VKX24_02235"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013422767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ07329.1"
                     /translation="MNERHLELCSSDEWADGLKRWILPSALQDFDLGDDVLEVGPGPG
                     RTTDLLKEMTPRLTAVEVDPGLAAALAARMAGTNVEVVHADATDLPFEDGRFSSVVSF
                     IMLHHVPTAELQDKLFAEVARVLAPGRGFTGCDSLDGDDFRELHTDDVCNPVPAEGLE
                     ARLLAAGFSEAKVRVNPYVMEFRARR"
     gene            complement(2559..>2746)
                     /locus_tag="VKX24_02240"
     CDS             complement(2559..>2746)
                     /locus_tag="VKX24_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006631135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HLJ07330.1"
                     /translation="GLSLYVVNYMSDTMTKIRTSDMSILQTVSTGVNPIGVTYDATTG
                     DVWVAVYTGEILVFADR"
BASE COUNT          366 a          977 c         1015 g          388 t
ORIGIN      
        1 cccgtaggcg gcgtgctcgt tctcctgcca tccggcgccg accccgagga gcaggcggcc
       61 gttgctgatg cggtcgaccg cggcggcgat cttggccagg acggccgggt ggcggtaggt
      121 gacgctcgtg accagcggag agatccgaag ccgcggcacc gtggccgcca gggcggcgat
      181 gaccgaccag cactcgagcg tgtcgccgtc ggtcgccgcc tcccccggcc cgttcggcat
      241 gaagtggtcg gcgaagtaga cgccgtccca cccggtggcc tcgcagtgcg tgacgagctc
      301 caggatgtcg tcgtagggcc gggtgggggc gggccagatg gcaaagcgca tgggacgttc
      361 ctagggcaac ccggccgctc gggcaactcc cgtccccggg agcgccgggg gcgggggacc
      421 gcccggtatg ccaccatcca agcgacccgc ggcggggtcg acggggaggt gggccggcgt
      481 ggagctgagc ggcaaggtgg cggtcgtgac cggcgggagc cgggggatcg gccgggcggt
      541 ggccgagggt ctcgcggccg cgggggcgga cgtggtcgtg gccagcagga agctcgacgc
      601 gtgcgaggcc gcggccgccg agatcgagaa ggccaccgcg agacgtgcgg tccctctcgc
      661 ctgcaacgtg agccactggg accagtgcga ccggctggtg caggagacct acgacgcctt
      721 cgggcactgc gagatcctcg tcaacaacgc cggcctgtca ccgctgtacc ccgacctggc
      781 gtcggtgagc gaggagctct acgacaagac ccatgcggtc aacgccaagg ggcccttccg
      841 gctctccgtg ctcttcggga cccgcatgca cggggcggcc ggcggctcga tcatcaacgt
      901 cagctcggtg tcctcctggc gaccgggggt caacgagctg ccctacgcca tggccaaggc
      961 cggcctcaac gcactcaccc tcgggctcgc cggcgccttc tccccgaacg tgcgggccaa
     1021 cgtggtcctc cccgggccgt acgagaccga catcgccaag gcgtgggcgc cgggtgcgat
     1081 cgaacagatg tcgaggatga accccctgcg gcgggtcggg cagccggccg acctggtcgg
     1141 gatctgcgtc ttcctggcca gcgacgccgc cagctacgtc aacggcgcgc agatcctcgt
     1201 cgacggcggg gcggcccgga cgctctgagg gcgtcgccgt ccgcccgctt gaacgggacg
     1261 tcgccgaccg acgacagttg ggccatggat tcggacccga gctcgaccgg tcacgccgtc
     1321 gaggagctgg cacgggacgg ggcgacgatg gccgaggccg cgtcggtcgc ggccgcggcg
     1381 ttccacgacg atcccttctt catcttcctg agcccgaacg agcgcctccg ccggcgcggc
     1441 ctcgtcatct acacccgggg cctcctcggc tccctcggag accgcgggct ggtgctcggg
     1501 gtccgcggcg ccggcggccg gatcctcggc gtggcggcct tcgtcaagcc cggctcctac
     1561 cccctgcccg ccggcgccca ggtgcgccag gcgggggcgg cgttctgggc gctcttgccc
     1621 cgtccccccg ccctggtctc ggggagccgg tacctgctgg cgatcgaccg ggcccatccg
     1681 cacggggagc tctggtacct cgccctgctg gtcgtggacc ccgcggccca gcggtccggg
     1741 gtcggcgggg ccctccagca gcacgtctac cgggacgccg atgcggagca ggtcccgagc
     1801 tacctcgaga cccagaagga ggccaacctc gcctactacc ggcgcttcgg ctacgagctc
     1861 gtccaggagc tccgtccggt ccgccggggg ccgcccctct ggacgatgcg gcgggagccg
     1921 cggccgcccg ccggctagcc cttccccctc gggcctcagc ggcgggcccg gaactccatc
     1981 acgtaggggt tgacgcgcac cttcgcctcc gagaacccgg cggcgagcag gcgggcctcg
     2041 aggccctcgg ccgggaccgg gttgcacacg tcgtcggtgt gcagctcccg gaaatcgtcg
     2101 ccgtccaggc tgtcgcaccc ggtgaagccc cgacccggcg cgaggacgcg ggcgacctcg
     2161 gcgaacagct tgtcctggag ctcggccgtc gggacgtggt ggagcatgat gaaggacacg
     2221 acggagctga accgtccgtc ctcgaacggg aggtcggtgg cgtcggcgtg caccacctcg
     2281 acgttcgtcc cggccatgcg ggccgccagc gccgcggcca ggcccggatc gacctcgacc
     2341 gccgtgaggc ggggcgtcat ctccttcagc aggtcggtgg tgcgcccggg gccgggcccg
     2401 acctcgagga cgtcgtcgcc caggtcgaag tcctgcaggg cgctcggcag gatccagcgc
     2461 ttgagcccgt cggcccactc gtcactgctg cagagctcga ggtgtcgttc gttcatcggt
     2521 ggtcggctcc ttcggtactt gaggcgggcc cgccgcgctc agcggtcggc gaagaccagg
     2581 atctccccgg tgtacacggc gacccagacg tccccggtgg tggcgtcgta ggtgaccccg
     2641 atggggttga ccccggtcga gacggtctgg aggatcgaca tgtccgaggt cctgatcttc
     2701 gtcatggtgt cggacatgta gttcacgacg tagagggaga ggccgt
//
LOCUS       DATGJT010000129         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1157622, whole genome shotgun sequence.
ACCESSION   DATGJT010000129 DATGJT010000000
VERSION     DATGJT010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1157622"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1616
                     /locus_tag="VKX24_02245"
     CDS             90..1616
                     /locus_tag="VKX24_02245"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HLJ07331.1"
                     /translation="MSGAQGADSDRLVPVTPRIHPRRLPEPGPGALVRRGLQIAEVTS
                     RHFVPVVLGHLFDRPRRRLAPRAFARPLRLSFEDLGGTFIKFGQIMASSPGMFGDEVA
                     QEFRSCLDTGPSVPIADVRFRIEADLGMPMAEAFADFDPDPIGRASIAVVHRATLHDG
                     RRVAVKIIRPGIEHQVATDLDLMEPLFEVLARQTGDQMAGSVLQLVDSFRIQIGEEMD
                     LRNEARTMAHFRRLLTEVDLPRIVVPVPYPELSGPNVLTMELLDGVPIDDLAKVAALG
                     VDPAPLVEEVVRSFFLHLVLTGTFHGDAHAGNMLLLRDGRIGIVDWGIVGRLDRATHR
                     FVLRMLAAALGEEDAWGEVTDHLVKTYGPALGVAVGMDERQMAAFIRQLVEPTLTRPF
                     GEVSLAGMLQTVQQQLATAQGLEAHRRSLRAILRRLRFQRRVRRMADESGGLFSDFDR
                     GTFLLTKQLMYFERYGRLFLADVPLLADQAFFKRLLKDAPALGEPSIRVEPGGPPPIE
                     "
     gene            1645..1839
                     /locus_tag="VKX24_02250"
     CDS             1645..1839
                     /locus_tag="VKX24_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013672765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HLJ07332.1"
                     /translation="MKVVVDYDRCASNAVCMSLLPQIFEVRDDGYLYVLDEHPPESLR
                     EQLEEAVRSCPTQAISLEDE"
     gene            1867..>2241
                     /locus_tag="VKX24_02255"
     CDS             1867..>2241
                     /locus_tag="VKX24_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019626789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HLJ07333.1"
                     /translation="MSPPRVRFAPSPTGYLHVGNARTALFNWLFARQHQGVFVLRIED
                     TDVERSQSSWVEGIIAGLSWLGMDADEGPFHQSDRSDRYDEIVTQLWSAGHLYACDCT
                     RDEVLARTKDNPTPGYDGHCRDR"
BASE COUNT          310 a          842 c          750 g          339 t
ORIGIN      
        1 cgagcgcgag ggtcggaagc cgctcgcctc acaacatcgg ccggactgcc cctccggcgg
       61 gccccggcgg tcgcgtagcc tgcgaggcga tgagcggcgc tcagggggcc gattcggacc
      121 ggctggtgcc cgtcacccct cgcatccatc cccgacggct gcccgagccg ggacccgggg
      181 ccctcgtgcg ccgcggcctc cagatcgccg aggtcacctc ccggcacttc gtgcccgtgg
      241 tcctgggcca tctcttcgac cgaccccgtc gtcggctggc gcctcgcgcc ttcgcccggc
      301 ccctccgcct gagcttcgag gacctcggcg ggaccttcat caagttcggc cagatcatgg
      361 cttcctcccc ggggatgttc ggggacgagg tggcccagga gttccgctcc tgtctcgaca
      421 ccggaccatc ggtcccgatc gccgacgtcc gcttccggat cgaggcggac ctcgggatgc
      481 cgatggcgga ggccttcgcc gacttcgacc cggacccgat cggacgggcg tcgatcgccg
      541 tcgtccaccg ggccaccctc cacgacgggc gacgcgtcgc cgtcaagatc atccggcccg
      601 ggatcgagca ccaggtggcg accgacctcg acctcatgga gccgctcttc gaggtgctcg
      661 cccgccagac cggcgaccag atggccggtt cggtcctgca gctcgtcgac agcttccgca
      721 tccagatcgg cgaggagatg gacctgcgca acgaggccag gacgatggcg cacttccgga
      781 ggctcctcac cgaggtggac ctgccccgga tcgtcgtccc cgttccctat ccggagctct
      841 cggggcccaa cgtcttgacc atggagctcc tggacggcgt gcccatcgac gacctggcca
      901 aggtggccgc cctcggcgtc gacccggcgc cgctcgtgga agaggtggtc cggtccttct
      961 tcttgcacct ggtgctgacg ggcacgttcc acggggacgc ccacgccggc aacatgctcc
     1021 tcctgcgcga cggccgcatc gggatcgtcg actgggggat cgtcgggcgg ctcgaccgcg
     1081 ccacccaccg cttcgttctc cggatgttgg cggccgccct gggggaggag gacgcctggg
     1141 gcgaggtgac cgaccacctg gtgaagacgt acgggcccgc cctcggggtc gccgtcggca
     1201 tggacgagcg ccagatggcc gcgttcatcc gccagttggt cgagccgacg ctgacccggc
     1261 cgttcgggga ggtctcgctg gccgggatgc tccagacggt ccagcagcag ctggccacgg
     1321 cccaggggct ggaggcccac cggcgctcgc tgcgggccat cctccggcgg ctgcgcttcc
     1381 aacggcgggt ccgccggatg gccgacgagt cgggcgggct cttctcggac ttcgaccgcg
     1441 gcaccttcct cctcaccaag cagctgatgt acttcgagcg ctacgggcgc ctgttcctgg
     1501 ccgacgtccc cctcctggcg gatcaggcgt tcttcaagcg gctgctcaag gacgctccgg
     1561 ccctcgggga gccgtccatc cgggtcgagc ccggagggcc cccgccgata gagtgatgcc
     1621 ccacaaggga gccgggaggt gtccgtgaag gtcgtcgttg actacgaccg ctgcgccagc
     1681 aacgcggtgt gcatgagcct gttgccccag atcttcgagg tccgcgacga cggctacctg
     1741 tacgtgctcg acgagcaccc gcccgagagc ctccgcgaac agctcgagga ggccgtgcgc
     1801 agctgcccga cccaggccat ctcgctcgaa gacgagtaag gccgcccccg acccgcggct
     1861 cctgcggtga gcccccctcg cgtccggttc gcgccgtcgc ccaccggcta cctgcacgtg
     1921 ggcaacgccc ggacggccct cttcaactgg ctcttcgccc gccagcacca gggggtcttc
     1981 gtgctccgca tcgaggacac cgacgtcgag aggagccaga gctcctgggt ggagggaatc
     2041 atcgccggac tgtcgtggct cgggatggac gccgacgagg gcccgttcca ccagtccgac
     2101 cggtccgacc gctacgacga gatcgtcacc cagctgtggt ccgccggcca tctgtacgcg
     2161 tgcgactgca cccgcgacga ggtcctcgcc cggaccaagg acaacccgac ccccggctac
     2221 gacgggcact gccgcgaccg c
//
LOCUS       DATGJT010000130         3657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_640300, whole genome shotgun sequence.
ACCESSION   DATGJT010000130 DATGJT010000000
VERSION     DATGJT010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3657
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640300"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VKX24_02260"
     CDS             <1..246
                     /locus_tag="VKX24_02260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07334.1"
                     /translation="YILDPRDGKTRRFKVASDEFFGALATLDEAGHGDRMRRDLIDLA
                     NRYPQTGWSQAIARIDGPAADASEAEVAEVESDENAA"
     gene            363..1592
                     /locus_tag="VKX24_02265"
     CDS             363..1592
                     /locus_tag="VKX24_02265"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HLJ07335.1"
                     /translation="MTTVATEAPDDLVHRVMATPGGHADPYPLYHRLRTAAPVHRSGL
                     DGNWYISGFDACRRVLGDPRIGKNDQFVVPRHGVDPERVRLARRRPRRSMITANPPDH
                     TRLRGAAKGAFIPPTMEALRPRVAAIVAERLDRLAALGEADVMAELAFPMPVTVVGEM
                     VGVPEEDREWFRPLMRVLVSSDSFRRSPDELAEVERAGDELDAYFTELIARRRKEPAE
                     DLLSWFIARADDGVLDDAELFSTVTLLFFAGFLTTTNLIGNGLAALFDHPDEQARLWA
                     DPGLAASTVEEILRFDSPVQFVHRNVLEDLEVDGQVLRAGEVVLVLLAAANRDPARFT
                     EPDRFDVARPDNNHLAFAWGLHFCLGARLARMEGELVFRGLAERFAAVEPAGEPVRNP
                     GLAIRGFESLPVRCTLR"
     gene            1668..3035
                     /gene="tig"
                     /locus_tag="VKX24_02270"
     CDS             1668..3035
                     /gene="tig"
                     /locus_tag="VKX24_02270"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HLJ07336.1"
                     /translation="METTVEALEGNKVRLRVNVPASEFESAIDAAFRKLAREVRIPGF
                     RPGKAPRRLLEAHLGTEIAREQALRDSVPEYYVKAVEAEELDTIAPPEFEITGGKEEG
                     DVEFDAVVEVRPQVEIEGYDSLRVEIEDPSVLDPEINVQIDNLRERFADLEESTAPLG
                     KGDYAQLNIKGYIHDEEVPGLTVSDFLYEVGSNLVVPKLDEELEGKRPGDMLKFNDVL
                     PARWGERAGEEVAFQVLVKETKRKVLPEATDEWAQEASEFDTLEELRADIRKRMENVR
                     LIQANLAVRDKVLQAVGAKVAIDIPEPLIQEEMERRLHSLLHRLEEQGATVEQYLAAT
                     GMSQDQLLADVRLEATKAVKADLGLRAVVAAEQITASDDEVEAEIARVAERAGRKPAQ
                     LRKEIERNQGLQAVRSDLSRGKALQFLVDHATVVDEEGKPLDISYPTPAPEAPAEEPE
                     EESQS"
     gene            3032..>3657
                     /locus_tag="VKX24_02275"
     CDS             3032..>3657
                     /locus_tag="VKX24_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009058701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HLJ07337.1"
                     /translation="MTEPIRNYLVPTVIEQTNRGERAFDLYSRLLKERIIFLGTPIDD
                     TVANLVSAQLLHLESENPDQDVSIYINSPGGEITGLFAIYDTMQYIKCDVRTICIGQA
                     ASAAAVLLAAGTNGKRFALPHARILIHQPYGGAAGQAADIEIQAKEIIRMRDLLNQML
                     ALDAGQPVEKVARDTDRDFIMSAEEAHVYGIIDEVIVTRELAGVPQAAG"
BASE COUNT          593 a         1320 c         1239 g          505 t
ORIGIN      
        1 tacatcctcg acccccggga cggcaagacc cgccgtttca aggtggcgtc ggacgagttc
       61 ttcggtgccc tggcgaccct cgacgaggcc ggccacggcg accggatgcg ccgcgacctg
      121 atcgacctgg ccaaccggta cccccagacc ggatggtcgc aggccatcgc ccgcatcgac
      181 ggcccggccg ccgacgcctc cgaggccgag gtggccgagg tggagtccga cgagaacgcc
      241 gcctagccca agccggatct cgcagtccgc cgagcggtcg gcgcgcaaac ggggcgcccg
      301 gccgctcgtc gcgtctgtaa gcgtttgcct catctgcgtc actgagtgaa gacttggcac
      361 tcgtgacaac tgtggcgacc gaggcccccg acgacctggt ccaccgggtg atggccaccc
      421 ccggcggcca cgccgatccc tatccgctct accaccggct gcggacggca gcgccggtcc
      481 accggagcgg tctcgacggc aactggtaca tctcgggatt cgacgcctgc cgccgggtcc
      541 tgggcgaccc ccggatcggc aagaacgacc agttcgtcgt gccccgccac ggcgtcgacc
      601 cggagcgggt acgactggcc cgccgccggc cgcggcggtc gatgatcacc gccaacccgc
      661 cggaccacac ccgactgcgg ggggcggcaa agggcgcctt catcccgccg acgatggagg
      721 ccctgcggcc ccgtgtggcg gccatcgtgg ccgagcggct cgaccgtctc gccgccctcg
      781 gcgaggccga cgtgatggcc gagctggcct tcccgatgcc ggtcaccgtg gtgggggaga
      841 tggtcggggt cccggaggag gaccgcgaat ggttccggcc gctcatgcgg gtcctcgtct
      901 cctcggactc cttccggcgc tcgcccgacg agctggccga ggtcgagcgg gccggcgacg
      961 aactcgacgc ctacttcacc gagctcatcg cccgccggcg caaggagccg gccgaggacc
     1021 tgctgtcgtg gttcatcgcc cgggccgacg acggcgtcct cgacgacgcc gagctgttct
     1081 ccacggtcac gctgctgttc ttcgccgggt tcctgaccac caccaacctg atcggcaacg
     1141 ggctcgccgc cttgttcgac caccccgacg agcaggcccg gctctgggcc gaccccggcc
     1201 tggccgcttc gaccgtggag gagatcctgc ggttcgactc gccggtgcag ttcgtccacc
     1261 gcaatgtgct cgaggacctc gaggtggacg ggcaggtgct gcgggcgggc gaggtggtcc
     1321 tggtcctcct cgccgccgcc aaccgcgacc cggcccggtt caccgagccc gaccgcttcg
     1381 acgtcgcccg gccggacaac aaccatctgg ccttcgcctg gggcctccat ttctgcctcg
     1441 gcgcccggct ggcccggatg gagggcgagc tggtgttccg ggggctcgcc gagcggttcg
     1501 cggcggtcga gccggccggg gagcccgtcc gcaaccccgg tctggccatc cggggcttcg
     1561 agtcgctgcc cgtccggtgc acactccgct gacggcagcc tcgccgtggg gctggggggc
     1621 cagacaccgc taggtgtctg gcccccgctg ttacacttcc cggcctcatg gagaccacag
     1681 tcgaagcgct ggagggcaac aaggtccgcc tccgggtcaa cgtccccgcc agcgagttcg
     1741 agtcggccat cgacgccgcc ttccgcaagc tggcccggga ggtgcggatc cccggattcc
     1801 ggccggggaa ggctccccgc cggctcctcg aggcccatct cggcacggag atcgcccggg
     1861 agcaggccct gcgggactcg gtgcccgagt actacgtgaa ggccgtcgag gccgaggagc
     1921 tcgacaccat cgcccccccc gaattcgaga tcaccggcgg caaggaagag ggtgacgtcg
     1981 agttcgacgc cgtggtcgag gtgcggcccc aggtcgagat cgagggctac gactcgctgc
     2041 gcgtcgaaat cgaggacccg tcggttctcg acccggagat caacgtccag atcgacaacc
     2101 tgcgggagcg cttcgccgac ctggaggagt cgaccgcccc gctcggcaag ggcgactacg
     2161 cccagctcaa catcaagggc tacatccacg acgaggaggt tcccggcctc accgtgagcg
     2221 acttcctcta cgaggtcggc tccaacctcg tcgtccccaa gctcgacgag gagctcgagg
     2281 gcaagcggcc gggcgacatg ctgaagttca acgacgtcct gccggcccgg tggggcgagc
     2341 gggccggcga ggaggtcgcc ttccaggtgc tggtgaagga gaccaagcgc aaggtcctcc
     2401 ccgaggcgac cgacgagtgg gcgcaggagg ccagcgagtt cgacacgctg gaggagttgc
     2461 gggccgacat ccgcaagcgg atggagaacg tccgcctgat ccaggcgaac ctcgccgtgc
     2521 gggacaaggt gctccaggcc gtcggggcca aggtggccat cgacatcccc gagccgctca
     2581 tccaggagga gatggagcgc cgcctccaca gcctcctcca ccggctcgag gagcagggcg
     2641 ccaccgtcga gcagtacctg gccgccaccg ggatgtccca ggaccagctc ctggccgacg
     2701 tccgcctcga ggccaccaag gcggtcaagg ccgacctggg cctgcgggcc gtggtggcgg
     2761 cggagcagat caccgccagc gacgacgagg tggaggcgga gatcgcccgc gtcgccgaac
     2821 gcgccgggcg caaaccggcc cagctgagaa aagagatcga acgcaaccag ggtctccagg
     2881 cggtacgctc tgatctgtcc cgagggaagg ctctgcagtt cctggtggac cacgccaccg
     2941 tggtcgacga ggaggggaag cccctcgata tttcgtaccc aacgcctgct cccgaagccc
     3001 cggcggagga gcccgaggag gagtcacagt cgtgaccgag cccatcagga actacctcgt
     3061 cccgacggtg atcgagcaga cgaaccgggg cgagcgggcc ttcgacctct actcccggct
     3121 cctcaaggag cggatcatct tcctgggcac gccgatcgac gacacggtcg ccaacctcgt
     3181 ctcggcccag ctgctgcacc tggagagcga gaaccccgac caggacgtca gcatctacat
     3241 caactccccg ggcggcgaga tcaccgggct gttcgccatc tacgacacga tgcagtacat
     3301 caagtgcgac gtccgcacga tctgcatcgg gcaggccgcc tccgccgccg ccgtcctgct
     3361 ggccgcgggc acgaacggca agcgcttcgc cctgccccac gcccggatcc tgatccacca
     3421 gccctacggt ggtgccgccg gccaagcggc cgacatcgag attcaggcca aggagatcat
     3481 ccggatgcgg gacctcctca accagatgct cgctctcgac gctggccagc cggtcgagaa
     3541 ggtggcccgg gacaccgacc gggacttcat catgagcgcc gaagaggctc acgtgtacgg
     3601 catcattgat gaagtgatcg tcacgcgaga gttggccggc gttccgcagg ccgcggg
//
LOCUS       DATGJT010000131         2088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1470100, whole genome shotgun sequence.
ACCESSION   DATGJT010000131 DATGJT010000000
VERSION     DATGJT010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470100"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VKX24_02280"
     CDS             <1..582
                     /locus_tag="VKX24_02280"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HLJ07338.1"
                     /translation="SRTPVVLHGAEVPGLGLVEQLEDAELPGWLPTLSDALAVCAGGV
                     VDVEIKASAADPADAVESRGRVVAELVAGAVGVPGGPARVVVSSFWPAALRAARSQRP
                     ELTTGLLVWPAQEAAAGLALADELGAAVLLPFRAQVDAALVRLAHERGQAVWAWTVND
                     EDDLRSALEAGVDAIISDELGRARSMLREHVPR"
     gene            638..1417
                     /locus_tag="VKX24_02285"
     CDS             638..1417
                     /locus_tag="VKX24_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HLJ07339.1"
                     /translation="MNVVVCVKQIPDPAAPQALDPETKTLVREGKLILDDSDAYGVEM
                     GLQLAEQAGGGEVTLVSMAPAGETSGLRTALAMGAAKAILVSDDALKGSDALATAKVL
                     AKAIERAQPDLVIAATESTDGYTGTTPVQVAELLGLPSVTFAKKVSIADGSVRVERQT
                     EAGYDEVECPLPALVTVTAGVVEPRYPSFKGIMAAKSKPVDQLTVADLGVDAAQVGLG
                     GSRQEVVEVVDAEERKAGEVVTDEGDAHERVVQFLEQLKLV"
     gene            1461..>2088
                     /locus_tag="VKX24_02290"
     CDS             1461..>2088
                     /locus_tag="VKX24_02290"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HLJ07340.1"
                     /translation="MPIDKVWVLAEAADGNPISTTLELLTQARAMGSTVEAIAWGPDT
                     SKAAGELGNFGATTVYDVGDIGDALPGAPVAAAIASLVQGGNRPDVLLVPTTYDGRDV
                     AGRLSAMLDLPVITNVVGLAEDGGEVRSEHGLFGGAKVAKARFSGDRPWIFVVRAKSF
                     AAEPSGGGAPQVVAAPAPELGATNSAKVLARHVEEQSGPKLDEADVVVS"
BASE COUNT          290 a          744 c          766 g          288 t
ORIGIN      
        1 agccggaccc cagtcgtcct ccacggcgcc gaggtccccg gcctcgggct ggtggagcag
       61 ctggaggacg ccgagctgcc gggctggctg cccacgctca gcgatgccct ggccgtctgc
      121 gccggcggcg tggtcgacgt ggagatcaag gcctcggctg ccgaccccgc cgacgcggtc
      181 gagtcccggg gccgtgtcgt ggctgagctc gtggccggcg ccgtcggggt gcccgggggc
      241 ccggcccgtg tcgtcgtttc gagcttctgg ccggcagccc tgcgagcggc acggtcgcag
      301 cgtccggagc tgacaaccgg cctcctcgtc tggcccgccc aagaggcggc cgccgggttg
      361 gcactcgccg acgagctcgg cgcggccgtg ctcctgccct tccgggcgca ggtcgatgcg
      421 gcgctggtgc gtctggccca cgaacggggc caggcggtct gggcgtggac tgtcaacgac
      481 gaggacgacc tgcgctcggc gctcgaggcg ggggtggacg caatcatctc cgacgagctc
      541 ggtcgtgccc gctccatgct tcgggagcac gtgccgcgct gacgcaggac cgggtcggat
      601 tggtccggcc ccgccctcct cgggaacaat cgggcccatg aacgtcgtcg tctgtgtgaa
      661 gcagatcccc gatccggccg ccccccaggc gctcgacccg gagaccaaga ccctggtccg
      721 ggaaggcaag ttgatcctcg acgactccga cgcctacgga gtggagatgg ggctgcagct
      781 ggccgagcag gcgggcggcg gcgaggtgac cctggtctcg atggcccccg caggcgagac
      841 ctcggggttg cgcaccgccc tcgccatggg cgcggccaag gcgatcttgg tgagcgacga
      901 cgcgttgaag gggtcggacg cgctcgcaac cgccaaggtg ctggccaagg cgatcgagcg
      961 ggcccagccc gatctcgtca tcgccgccac cgagtccacc gacggctaca cgggtaccac
     1021 gccggtccag gtcgccgagc tactcggcct gccttcggtc acattcgcca agaaggtgtc
     1081 gatcgccgac ggctccgtgc gcgtggagcg ccagaccgag gccggctacg acgaggtcga
     1141 gtgcccgttg ccggcgctcg tgaccgtcac cgccggcgtc gtcgagccgc gctatccgtc
     1201 cttcaagggg atcatggcgg cgaagtccaa gcccgtcgac cagctgacgg tggcggacct
     1261 cggcgtcgac gccgcccagg tcgggctcgg cggctcccgc caggaagtgg tcgaggtggt
     1321 cgacgccgag gagcgcaagg cgggggaggt cgtgaccgac gaaggcgatg cccacgagcg
     1381 cgtcgtccag ttcctcgagc agctcaagct ggtctgagca gcccgaccgt tcgcacacga
     1441 tttagggaga cgtgacgcac atgcccatcg acaaggtctg ggtcctcgcc gaggccgccg
     1501 acggcaatcc catcagcacg acgctggagc tgctcaccca ggcgagggcc atgggctcga
     1561 ccgtcgaggc gatcgcctgg ggtcccgaca cctccaaggc ggcaggggag ctcggcaact
     1621 tcggggccac caccgtctac gacgtgggcg acatcggcga cgcgctcccg ggcgccccgg
     1681 tggcggccgc catcgcctcc ctcgtgcagg gcgggaaccg gcccgacgtc ctgttggtgc
     1741 cgaccaccta cgacggtcga gacgtcgccg ggcggctctc cgccatgctg gacctccccg
     1801 tgatcaccaa cgtggtcggg ctcgccgagg acggcggcga ggtccgctcg gagcacggcc
     1861 tcttcggggg tgccaaggtg gccaaggccc gcttctcggg cgaccggccc tggatcttcg
     1921 tggtgcgggc gaagtccttc gccgccgagc cctccggtgg cggcgcgccg caagtggtcg
     1981 cggcgccggc gcccgagctc ggcgccacca acagcgccaa ggtgctcgcc cggcacgtgg
     2041 aggagcagag cgggcccaag ctcgacgagg ccgatgtcgt cgtctccg
//
LOCUS       DATGJT010000132         3463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_848284, whole genome shotgun sequence.
ACCESSION   DATGJT010000132 DATGJT010000000
VERSION     DATGJT010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3463
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848284"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..575
                     /locus_tag="VKX24_02295"
     CDS             <1..575
                     /locus_tag="VKX24_02295"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013514941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HLJ07341.1"
                     /translation="SMWDTLYVKLGRPEEVVLRTHTSPVQIRVMESRQPPVYTVMPGR
                     CYRRDTLDARHSPVFHQIEGLVVDRGITFGDLAGTIDAFTRAYFGPGHTSRLRPSYFP
                     FTEPSAEFEVTCFVCDGAGCSVCSKTGWLELGGCGMVDPNVFRAVGYDSEAYTGFAFG
                     FGLERMAMVRYGVEHIKSFFENDIRFLKQF"
     gene            588..2990
                     /gene="pheT"
                     /locus_tag="VKX24_02300"
     CDS             588..2990
                     /gene="pheT"
                     /locus_tag="VKX24_02300"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HLJ07342.1"
                     /translation="MKAPLSWLRDFAPIEGTPLELADRLNGIGLIVEGISAPGRDIAG
                     VRTVRVLAVEKHPDADRLALVDVDPGDGDAVRVVCGAHNYAVGDVVPWAPPGAELPGG
                     FKLERRKIRGQVSDGMLCAPDELGLSDDHSGIMILAPDTPLGEDLRTVLGLDDIVFDL
                     EITPNRPDAMSITGVARDLAAALGVPFTLPQPSAAAAVDLEPASLMVEAPDRCPRYVA
                     MIGRVAVAPSPGWMAQRLTKAGMRPISNVVDVTNYVMLERGQPLHAFDLSRLGGRGIV
                     VRMAADGEKITTLDDVERPLSAADLLICDANRVPQAIAGVMGGGDSEVSDATTEVLLE
                     SAYFTPDGILRTSKRLGLRTESSARFERGVDPNGTLRAAERAWELFTEIASGQTAHGT
                     LDEYPAPIEPIRVSLRTARVNDVLGTDLDTPTVRRYLEPLGFAVPEGSHAEGHGGVVE
                     FEVPTYRPDCEREIDLVEEVARHHGYNNIVRTLPRMDEPSGGLTPAQRGRRAVRDALL
                     GAGLSEAYTFSLVAPADLAAAGLPAEGIELENPLRAEESLLRPAVLPGLLRAAAFNAG
                     HGLPDVGLFEIGHVFLPPPAGQTLPDEREHLAVVLTGTVFRLPHEPNRPVDGHDAVGA
                     LETVAEALGLADWSLEPDDAPGFSSGRAAAVVVDGAAVGAVGEIDAGVRARLGLSGPV
                     VALEVNLSRLLGADRRERRAVTPSRYPASAIDLAFVVDEAMPAGAAQRTLSAAAGDLL
                     EDVRLFDVFRSEALGPGKKSLAFGLRFRAPDRTLTDEEVGGLRQRCIDAMAKEHGAAL
                     RG"
     gene            3006..3413
                     /locus_tag="VKX24_02305"
     CDS             3006..3413
                     /locus_tag="VKX24_02305"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HLJ07343.1"
                     /translation="MFVHRRRPTYAEVDQQGVVFHGHWLAYFDDAMTRFCDHLGFPPK
                     EVFFSTFDVMVVKAAVEWQGPGGFDDEVEIAVAPVRLGTKSFDLEYRATVDGRPVCTG
                     TVTYVSVKPGSAESVPIPDDVRRALDRAASKNS"
BASE COUNT          458 a         1260 c         1235 g          510 t
ORIGIN      
        1 ggtcgatgtg ggacaccctc tacgtcaagc tcggccggcc cgaggaagtg gtgctgcgga
       61 cccacacgtc gccggtgcag atccgggtca tggagtcccg ccagccgccc gtctacaccg
      121 tgatgccggg ccgttgctac cggcgggaca cgctcgatgc ccgtcactcg ccggtgttcc
      181 accagatcga gggactggtc gtcgaccgcg gcatcacctt cggcgacctg gccggcacca
      241 tcgacgcctt cacccgggcc tacttcggcc cgggtcacac gtcgcggctg cggccgagct
      301 acttcccctt caccgagccg agcgccgagt tcgaggtcac ctgtttcgtc tgcgacggcg
      361 ccggctgctc ggtgtgctcc aagacgggct ggctggagct cggcggctgc gggatggtcg
      421 accccaacgt gttccgggcc gtcggctacg actccgaggc ctacaccggc ttcgccttcg
      481 gcttcgggct ggagcggatg gcgatggtcc gctacggcgt ggagcacatc aagtcgttct
      541 tcgagaacga catccggttc ctgaagcagt tctagcgagg agtagctgtg aaggcccctc
      601 tctcctggct ccgcgacttc gccccgatcg agggaacgcc gctcgagctg gccgaccggc
      661 tcaacggcat cgggctcatc gtcgagggga tcagcgcgcc ggggcgcgac atcgccggcg
      721 tccgcaccgt gcgggtcctg gcggtggaga agcaccccga cgccgaccgc ctggcgctgg
      781 tcgacgtcga ccctggtgac ggcgacgccg tccgggtggt gtgcggcgcc cacaactacg
      841 ccgtgggcga cgtcgtgccg tgggcgccgc ccggcgccga gctgcccggc gggttcaagc
      901 tggaacggcg caagatccgg ggccaggtgt cggacgggat gctctgcgcc cccgacgagc
      961 tcggcctgtc cgacgaccac agcgggatca tgatcctggc ccccgacacg ccgctgggcg
     1021 aggacctgcg caccgtcctc ggcctcgatg acatcgtctt cgacctcgag atcacgccca
     1081 accggcccga cgccatgtcg atcaccggcg tggcccgcga cctggcggcg gccctcgggg
     1141 tgccgttcac gctgccccag ccgagcgccg cggcggcggt cgacctcgaa ccggcgtcgc
     1201 tgatggtcga agcgcccgac cgctgcccgc gctacgtggc catgatcggc cgggtggccg
     1261 tcgccccgtc gccgggctgg atggcgcagc ggctgaccaa ggccggcatg cgcccgatct
     1321 ccaacgtggt cgacgtcacc aactacgtga tgctggagcg gggccagccg ctccacgcct
     1381 tcgacctgag ccggctcggc gggcggggca tcgtcgtccg catggcggcc gacggcgaga
     1441 agatcaccac cctcgacgac gtcgagcgtc cgctctccgc cgccgatctg ttgatctgcg
     1501 acgccaaccg ggtgccgcag gccatcgccg gcgtcatggg cggcggcgac tccgaggtct
     1561 ccgacgccac caccgaagtc ctgctggagt cggcgtactt cactcccgac ggcatcctgc
     1621 gcacctccaa gcggctcggc ctgcggacgg agtcgtcggc ccgcttcgag cggggtgtcg
     1681 acccgaacgg gacgctccgg gccgccgagc gggcctggga gctcttcacg gagatcgctt
     1741 ccggccagac ggcgcacggc accctcgacg agtacccggc gccgatcgag ccgatccggg
     1801 tgtcgctgcg gacggcgcgc gtcaacgacg tgctcggcac ggacctcgac accccgaccg
     1861 tccggcgcta tctcgaaccg ctcgggttcg ccgtaccgga agggtcccac gccgagggtc
     1921 acggcggcgt cgtcgaattc gaggtcccca cctatcggcc cgactgcgag cgggagatcg
     1981 acctcgtgga ggaggtcgcc cgccaccacg gctacaacaa catcgtccgg acgctgcccc
     2041 gaatggacga gccgtcgggc gggctgacgc cggcgcagcg ggggcggcgg gcggtgcgcg
     2101 acgccctcct cggcgccgga ctgtccgagg cctacacctt ctcgctggtg gcgccggccg
     2161 acctcgccgc cgccggcctg cccgccgagg ggatcgaact ggagaaccca ctgcgggccg
     2221 aggagtcgct gctccgcccg gcggtgctgc ccgggctgct gcgggcggcg gccttcaacg
     2281 ccggccacgg cctgcccgac gtcggcctgt tcgagatcgg ccacgtcttc ctgcccccgc
     2341 ccgccgggca gaccctgccc gacgagcggg agcacctcgc cgtcgtcctc accggcacgg
     2401 tgttccgcct gccccacgag ccgaaccggc cggtcgacgg ccacgacgcc gtcggcgcgc
     2461 tggagacggt ggccgaagcg ctgggcctcg ccgactggtc gctcgagccc gacgacgcac
     2521 cgggcttctc ttccggacgg gcggcggcgg tggtcgtcga tggcgcggcg gtgggggcgg
     2581 tcggggagat cgacgccggc gtccgggccc ggctcgggtt gagcgggccg gtggtggcgt
     2641 tggaggtgaa cctgtcgcgg ctgctcggcg ccgaccgccg ggagcggcgg gcggtgacgc
     2701 cgtcgcgcta tccggcctcg gcgatcgacc tggccttcgt cgtcgacgag gcgatgccgg
     2761 ccggagcggc gcagcggacg ctgtcggccg cggccggcga cctgctggag gacgtccgcc
     2821 tcttcgatgt gttccgctcc gaggcgctcg gcccgggaaa gaagagcctg gccttcggcc
     2881 tgcggttccg ggcccccgac cggacgctga ccgacgagga ggtcggcggc ctgcggcagc
     2941 gctgcatcga cgccatggcg aaggaacacg gcgccgccct gcggggatga cggtggggca
     3001 gcgccgtgtt cgtccatagg cggcggccga cctacgccga ggtcgaccag cagggcgtcg
     3061 tgttccacgg ccactggctg gcctacttcg acgacgccat gacgcgcttc tgcgaccacc
     3121 tcgggttccc gcccaaggag gtgttcttct ccaccttcga cgtcatggtc gtgaaggcgg
     3181 ccgtcgagtg gcagggcccg gggggcttcg acgacgaggt cgagatcgcc gtggcgcccg
     3241 tccgcctcgg gacgaagtcc ttcgacctgg agtaccgggc caccgtcgat ggccgcccgg
     3301 tctgcaccgg cacggtgacc tacgtctcgg tcaagcctgg cagcgccgag tcggtcccga
     3361 tccccgacga cgtccgccgg gcccttgacc gggcggcgtc aaaaaatagt tgacgattga
     3421 caactttcgg ttgacatgtc gtcgtcgtca acctatgctt gtc
//
LOCUS       DATGJT010000133         3449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_225998, whole genome shotgun sequence.
ACCESSION   DATGJT010000133 DATGJT010000000
VERSION     DATGJT010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225998"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..2099)
                     /gene="paaZ"
                     /locus_tag="VKX24_02310"
     CDS             complement(51..2099)
                     /gene="paaZ"
                     /locus_tag="VKX24_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013850265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation bifunctional
                     protein PaaZ"
                     /protein_id="HLJ07344.1"
                     /translation="MRVLQSYVAGEWVTPSGDGVEVHDATTGEPVARVGSDGVDVAAA
                     LDYGRRVGGPALRRMTFGRRAGILKALGAYLGEHKEDLYGLSTAAGATRPDAWLDVEG
                     GTGVLMVYASKGRRELPDSTFLRDGDAEVLAKDGSFLGLHLLVPREGVAVLINAFNFP
                     VWGMLEKVAPALLAGVPVLVKPATPTAYVAEAAVRLMVDSGALPDGALQLVCGSLGDA
                     FDHLTGQDSVFFTGSAATATKLRSHPNVLANSVRFTAEADSLNASVLGPAAQPGTAEF
                     DLYVKEVAREMTTKAGQRCTAIRRALVPAPLVDDVVAALSDRLAKVVVGDPRREEVRM
                     GPLVSLDQRAEVERAVSALAAGAEIAVGGPAAKFEPLGADADHGAFLAPTVLVAREAG
                     AGAAVHEVEPFGPVCTVLPYDGVDGAVDLARLGKGSLVVSVFTPDAGEAGRLALGLGA
                     HHGRVLLVDECCGKTQTGHGSPMPHLVHGGPGRAGGGEELGGVRSVHHHLQRVAVQGS
                     PDTLSALTGTLLPGATRHEGGPHPFTRHFEDLALGDTLVTEKRAITVEDIERFADLTG
                     DHFYAHTDEEAAAKSPIFKGRVAHGYFVLAAAAGLFVWPEPGPVLANYGIDRLRFTTP
                     VRPGDEIHVVFTCKEKSPRPGAGYGEVRWDTQVVNQEGTVVAAYDVLTMVATKEGAAK
                     "
     gene            2321..2776
                     /locus_tag="VKX24_02315"
     CDS             2321..2776
                     /locus_tag="VKX24_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007579527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HLJ07345.1"
                     /translation="MFRSIVVGTDGSATATEAVRRAHELAGALTADLHVVNAYRPPAV
                     VLAATAEPGLGVSPIVGWEAAARHDACRLLDEVVLGLAGPVPVTTHAVAAHPATALLS
                     VAEAVDADLIVVGNRGMQGTRRVLGSIPNHVSHHAGCDVLVVDTVHAMA"
     gene            2819..>3449
                     /locus_tag="VKX24_02320"
     CDS             2819..>3449
                     /locus_tag="VKX24_02320"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07346.1"
                     /translation="MLTGSGLSKAHGQRVLFSDVTITLTPGRRVALVGGNGTGKTTLL
                     EILAGEQRPDTGAVTRPSTETLAYLPQDRTEAADAGGWGVSTRPGRREPPRNALDEAL
                     RGAGDLYGLAHRMEELQHGVATTTGAEHDRLLRELGNAQTAFETQGGYAVEADAHRVL
                     AGLGFTDEDRRRPLTELSGGWRMRAALARILVARPDVLLLDEPTNHLDVE"
BASE COUNT          440 a         1307 c         1264 g          438 t
ORIGIN      
        1 gacgtcgccg ccgcgctcca ggacgacggc ctcggcgctc gtttcggggc tcacttcgcc
       61 gccccctcct tcgtggccac catcgtgagc acgtcgtagg ccgccaccac cgtcccctcc
      121 tggttgacga cctgcgtgtc ccaccgcacc tcgccgtagc cggcgccggg ccggggcgac
      181 ttctccttgc aggtgaacac gacgtggatc tcgtcgccgg gccggaccgg agtggtgaaa
      241 cgcagccggt cgatgccgta gttggccagc accggccccg gctcgggcca gacgaagagg
      301 ccggcggcgg cggccagcac gaagtatccg tgggccaccc ggcccttgaa gatggggctc
      361 ttggccgccg cctcctcgtc ggtgtgggca tagaagtggt cgccggtcag gtcggcgaag
      421 cgctcgatgt cctcgacggt gatggcccgc ttctcggtga ccagcgtgtc gcccagcgcc
      481 aggtcctcga agtgcctggt gaacgggtgc ggcccgccct cgtgccgcgt ggcgccgggc
      541 agcaacgtgc cggtcagcgc cgagagcgtg tcgggggagc cctgcaccgc cacccgctgg
      601 aggtggtggt ggaccgaccg cacgccgccc agctcctcgc cgccgccggc ccggccaggg
      661 ccgccgtgga cgaggtgggg catcggcgaa ccgtggccgg tctgggtctt gccgcagcac
      721 tcgtcgacca gcagcacccg gccgtggtgg gcgccgagac ccagcgccag tcggcccgcc
      781 tcgccggcgt cgggggtgaa gaccgaaacc accaggctgc ccttgccgag ccgggcgagg
      841 tcgacggcgc cgtccacgcc gtcgtagggc agcacggtgc acaccggccc gaacggctcc
      901 acctcgtgga cggcggcccc ggcgccggcc tcccgggcca ccaggaccgt cggggcgagg
      961 aaggcgccgt ggtcggcgtc ggccccgagc ggttcgaact tggccgccgg cccgccgacg
     1021 gcgatctcgg cgccggcggc cagcgccgag accgcccgct cgacctcggc ccgctggtcg
     1081 aggctgacca gcgggcccat gcggacctcc tcccggcggg ggtcgccgac gacgaccttg
     1141 gccagccggt cggacagcgc cgccaccacg tcgtcgacca gcggcgccgg caccagcgcc
     1201 cggcggatgg cggtgcagcg ctgcccggcc ttcgtcgtca tctcccgggc gacctccttg
     1261 acgtagaggt cgaattccgc cgtgccgggt tgcgccgccg ggccgaggac ggaggcgttg
     1321 agcgagtcgg cctcggccgt gaaccggacg gagttcgcca gcacgttcgg gtgggagcgc
     1381 agcttcgtgg ccgtcgccgc cgagccggtg aagaacaccg agtcctgccc ggtcaggtgg
     1441 tcgaaggcgt cgccgaggct cccgcagacg agttgcagcg ctccgtcggg cagggcgccg
     1501 gagtcgacca tgagccggac cgccgcctcg gccacgtagg ccgtcggcgt ggccggcttg
     1561 accaggaccg gcacgccggc caggagcgcc ggggcgacct tctccagcat cccccacacc
     1621 gggaagttga aggcgttgat gaggacggcg acgccttccc ggggcacgag gagatgcagc
     1681 ccgaggaagg acccgtcctt ggccagcacc tccgcatcgc cgtcgcgcag gaaggtcgag
     1741 tcgggcagtt cccggcggcc cttcgaggcg tagaccatga ggacgcccgt cccgccctcg
     1801 acgtcgagcc aggcgtcggg ccgagtggcg ccggccgccg tcgacagacc gtagaggtct
     1861 tccttgtgct cgccgaggta ggcgccgagc gccttcagga tccccgcccg ccggccgaag
     1921 gtcatccgcc gcagtgccgg gccaccgacc cgccggccgt agtcgagcgc cgcggcgacg
     1981 tcgacgccgt cgctgcccac ccgggcgacg ggctcgccgg tggtggcgtc gtggacctcg
     2041 acgccgtcgc ccgacggtgt gacccactcg ccggcgacgt agctctgcag gacccgcatg
     2101 gcgaccctcc ccgtccggcg ccgccccgac cggcgtcgcc cgacgccgtt ctacgtcgtc
     2161 gcatgggggg tctgtcaact tttcccgacc gctcggccgg tgaattccgt tccggttcgg
     2221 agtgtcaagt ccgtgacggt ccggctgtcg cccctgggac ggcgccggcc gggccgccgt
     2281 cctaccgtcg tggcgaggca gcgagcaagg gaggacggcg atgttccgct cgatcgtggt
     2341 gggtacggac ggatcggcga cggcgaccga ggcggtgcgc cgggcccacg agctggccgg
     2401 cgccctgacg gccgacctcc acgtcgtcaa cgcctaccgg cccccggccg tggtgctggc
     2461 cgccaccgcc gagccgggcc tcggggtgag cccgatcgtc gggtgggagg ccgcggcccg
     2521 ccacgacgcc tgccgcctcc tggacgaggt cgtgctcggc ctcgccggcc ccgtgccggt
     2581 gacgacgcac gccgtggccg cccaccccgc caccgcactc ctctccgtgg ccgaggccgt
     2641 cgacgccgac ctcatcgtcg tcggcaaccg gggcatgcag ggcacccgcc gggtgctggg
     2701 cagcatcccc aaccacgtgt cccaccacgc cggctgcgac gtcctggtgg tcgacaccgt
     2761 ccatgccatg gcctgaccgg gtgggccgct cgggcccgct cgctcctagc ctgaaagcgt
     2821 gctcaccggt tccgggctgt cgaaggcgca cggccagcgc gtcctgttct ccgacgtcac
     2881 gatcacgctg acgccgggcc ggcgcgtggc gctggtcggc gggaacggca ccggcaagac
     2941 cacgctgctg gagatcctgg cgggcgagca gcggcccgac accggggccg tgacccgccc
     3001 gtccaccgag accctggcct acctgcccca ggaccgcacc gaggccgccg acgccggggg
     3061 atggggggtg tccacccgac cagggcggcg ggagccgcca aggaacgcgc tcgacgaggc
     3121 gctccgcggc gccggagatc tgtacgggct ggcgcaccgg atggaggagc tccagcacgg
     3181 cgtcgccacc accacgggcg ccgagcacga ccgcctcctg cgggagctgg gcaacgccca
     3241 gacggccttc gagacccagg gcggctatgc cgtggaggcc gatgcccacc gggtgctggc
     3301 cgggctcggc ttcaccgacg aggaccggcg ccgtccgctg accgagctgt cgggtgggtg
     3361 gcggatgcgg gcggccctgg cccggatcct cgtcgcccgg cccgacgtcc tgctgctgga
     3421 cgagccgacc aaccacctcg acgtcgagg
//
LOCUS       DATGJT010000134         2977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_122913, whole genome shotgun sequence.
ACCESSION   DATGJT010000134 DATGJT010000000
VERSION     DATGJT010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122913"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VKX24_02325"
     CDS             <1..195
                     /locus_tag="VKX24_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020664722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HLJ07347.1"
                     /translation="LELNVAIRTFQIARGRTHLGVGGGITVDSDPAAEWRETELKAAR
                     LLALAGAPERAGLGAGIGAA"
     gene            192..1052
                     /locus_tag="VKX24_02330"
     CDS             192..1052
                     /locus_tag="VKX24_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018103848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HLJ07348.1"
                     /translation="MISPGPLIVWVDGALVAEHEARISPFDHGLLTGDGVFETLRVYR
                     GEPYCWRRHYERLARSASGMGLALPPSEPLRQAAIDVIEANRFTDARLRITVTGGPSP
                     LGSDRGRATPTLILAASALPPPGPAPPVSVVTVPWPRNERGALAGLKTISYGENVRAL
                     AAAAEAGAGEAIFANTRGELCEGTGTNVFVVAGGVLRTPPESSGCLLGVTRAIILELA
                     GRLGIDAEETALPLSAVATADEAFISSSTREVQAISAVDGHALPSAPGPVTTLLADAF
                     RRAVADDLDP"
     gene            complement(1101..1919)
                     /locus_tag="VKX24_02335"
     CDS             complement(1101..1919)
                     /locus_tag="VKX24_02335"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HLJ07349.1"
                     /translation="MTAGSPTPGGAPPGPRAWNVDADRLAGTRFAAVRYFEEIGSTNT
                     EALEQAKAGAPEGLVVVADHQTAGRGRLGRTWSAEPGSALLVSVLLRPPLPIDEVPVV
                     LMAAGLAACDGVEAAAGFRPKLKWPNDLVAGDRKLAGLLTESTGEPEPAVVLGLGLNV
                     TAGAYPEKLDQPATSCEEEAGRPVGREDVLVGLLRALETRYSTVLAAGGRAATLDAYR
                     ADSATLGRRVRVELTGGEALEGEATGVADDGRLVVVDAAGEHHVSVGDVKHLRS"
     gene            1941..>2977
                     /locus_tag="VKX24_02340"
     CDS             1941..>2977
                     /locus_tag="VKX24_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HLJ07350.1"
                     /translation="MADLPEKVLIANRGEIAVRVMRTCRELGVPTVAVYSDVDRDALH
                     VRHADEAYSLGGQTATESYLNTAAILDVIARSGATAVHPGYGFFSENADFARAVTDAG
                     VTWIGPPPGAIELMGDKVTSRRTATAAGVAGVPGTLDPVTKPEEVQAFADEHGYPVAI
                     KAAFGGGGRGLRVVRDAGSVAAAMESAQREAAAAFGRPEIYVERYLERPRHVELQIFC
                     DTHGNGVYLGERDCSVQRRHQKLIEETPAPGLSEETRRAMGEAAIKVAQACGYVNAGT
                     VEFLYQDGDFFFLEMNTRLQVEHCVTELVTGLDLVEEQLRVAMGARLSFSQDSIERRG
                     HAIECRINAEDP"
BASE COUNT          389 a         1111 c         1103 g          374 t
ORIGIN      
        1 ctggagctca acgtcgccat ccgcaccttc cagatcgccc gcgggcggac gcacctcggc
       61 gtcggcggcg ggatcaccgt cgactccgat cccgccgccg agtggcggga gacggagctc
      121 aaggccgccc ggctgctggc cctggccggg gccccggagc gggccggcct cggcgccggg
      181 atcggcgcgg catgatcagc cccggcccgc tcatcgtgtg ggtcgacggc gccctcgtcg
      241 cggagcacga ggcccgcatc tcgcccttcg accacggact cctcaccggc gacggcgtgt
      301 tcgagaccct gcgggtctac cggggagagc cctactgctg gcggcggcac tacgagcggc
      361 tggcccggag cgcctcgggg atgggcctgg ccctcccgcc gagcgaaccg ctgcgccagg
      421 cggcaatcga cgtcatcgag gccaaccggt tcaccgacgc ccggctgcgc atcacggtca
      481 ccggcgggcc ctcgccgctc ggctccgacc ggggccgggc gacgccgacc ctgatcctgg
      541 ccgccagcgc gctcccgccg ccgggccccg ctccgccggt gtcggtggtg acggtgccct
      601 ggccccgcaa cgagcggggg gcgctggccg ggctgaagac gatctcctac ggcgagaacg
      661 tccgggccct ggccgccgcc gccgaggcgg gggccggcga ggcgatcttc gccaacaccc
      721 gcggcgagct gtgcgaggga acggggacga atgtcttcgt cgtcgcgggc ggcgtcctcc
      781 gcacgccgcc ggaatcgtcg ggctgcctgc tcggcgtgac ccgggcgatc atcctggagc
      841 tggccgggcg gctgggcatc gacgccgagg agacggcgct gccgctgtcg gcggtggcca
      901 ccgccgacga ggcgttcatc agctccagca cccgggaggt gcaggcgatc tcggcggtgg
      961 acggtcacgc gttgccgtcc gcccccggcc cggtcaccac gctgctggcc gacgccttcc
     1021 gccgggccgt ggccgacgac ctcgatccct gaggttcggc attcctccgc aacgacaggt
     1081 gttgcgcagg aacgccgaag tcaggagcgg aggtgcttca cgtcgccgac gctgacatgg
     1141 tgctcgccgg cggcatcgac caccaccagg cggccgtcgt cggcgacgcc ggtcgcctcg
     1201 ccttcgagcg cctcgccgcc ggtcagctcg acccgcaccc ggcggccgag ggtggccgag
     1261 tcggcccggt aggcgtcgag cgtcgccgcc cgtccaccgg cggccagcac ggttgagtag
     1321 cgggtctcga gcgcccggag gagcccgacg aggacgtcct cccggccgac cgggcggccg
     1381 gcctcctcct cgcagctggt ggccggctgg tccagcttct ccgggtaggc gccggcggtc
     1441 acgttgagcc cgaggccgag gaccacggcc ggctccggct ccccggtcga ctccgtcagc
     1501 aggccggcca gcttgcggtc gccggccacg agatcgttgg gccacttgag cttgggccgg
     1561 aagccggccg ccgcctccac gccgtcgcag gcggcgaggc cggccgccat cagcacgacg
     1621 ggcacctcgt cgatgggcag cggaggacgg agcagcaccg acaccagcag ggcgctgccg
     1681 ggctcggcgg accacgtccg gcccagccgt ccccggccgg cggtctggtg gtcggcaacc
     1741 acgacgaggc cctccggggc gccggccttc gcctgctcca gggcttcggt gttggtcgag
     1801 ccgatctcct cgaagtaccg cacggcggcg aagcgggtgc cggccaggcg atcggcgtcg
     1861 acgttccaag cccgggggcc cgggggcgcc cccccaggag taggcgatcc ggcggtcacg
     1921 gaccgtagga tacggccgcc atggctgatc ttcccgagaa ggtgctcatc gccaaccgcg
     1981 gcgagatcgc ggtccgggtc atgcggacgt gccgggagct cggcgtcccg acggtggcgg
     2041 tgtactccga cgtcgaccgc gacgccctcc acgtccgcca cgccgacgag gcctactccc
     2101 tcggcgggca gacggcgacc gagagctacc tcaacaccgc ggccatcctc gacgtcatcg
     2161 cccggtcggg ggcgacggcc gtccaccccg gctacggctt cttctccgag aacgccgact
     2221 tcgcccgggc ggtgaccgac gccggcgtga cgtggatcgg cccgccgccg ggagccatcg
     2281 aattgatggg cgacaaggtg acgtcgcgcc ggacggcgac ggcggccggc gtcgccgggg
     2341 tgcccggcac gctcgacccg gtgacgaagc ccgaggaggt ccaggccttc gccgacgagc
     2401 acggctaccc ggtggccatc aaggccgcct tcggcggcgg cgggcggggg ctgcgggtgg
     2461 tgcgggacgc cggctcggtg gccgccgcca tggagtcggc ccagcgggag gcggcggcgg
     2521 cgttcggccg gcccgagatc tacgtggagc gctatctcga gcgcccccgc cacgtcgagc
     2581 tgcagatctt ctgtgacacg cacggcaacg gcgtctacct cggcgagcgg gactgctcgg
     2641 tgcagcgtcg ccaccagaag ctgatcgagg agacgccggc ccccggcctc tccgaggaga
     2701 cccgccgggc catgggcgaa gcggccatca aggtggccca ggcctgcggc tacgtcaacg
     2761 ccggaacggt cgagttcctc taccaggacg gcgacttctt cttcctggag atgaacaccc
     2821 ggctccaggt cgagcactgc gtgaccgagc tggtgaccgg cctcgacctg gtcgaggagc
     2881 agctgcgggt ggcgatgggc gcccggctgt cgttcagcca ggactccatc gagcggcggg
     2941 gccacgccat cgagtgccgc atcaacgccg aggaccc
//
LOCUS       DATGJT010000135         2656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_122964, whole genome shotgun sequence.
ACCESSION   DATGJT010000135 DATGJT010000000
VERSION     DATGJT010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122964"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            638..>2656
                     /locus_tag="VKX24_02345"
     CDS             638..>2656
                     /locus_tag="VKX24_02345"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HLJ07351.1"
                     /translation="MAGGRIGRRPALAATLVGLVLAAAGLAPAVAADKGAKASPAARP
                     SASTSSGRRASAPRSAAAIEDAADNVDRLVVRTRSQLSRADENALALSVGGRNAGDVR
                     TAVFDVDVPQGRGPAATRTLQQDGRVAHVESDVRFKSAEMPPTDPQPLVPSGAATGSE
                     AGAAPPPVNERCYSGCALTFDGGQTSRIYSQSDFMNIGAPAAWAVTHGDPNMLVAVVD
                     TDVDATQPDLAGKVIVGTNFSGDNTPDPEGHGTAVAGLIAAIPNNGIGIAGLGWNTKV
                     LSVRVLDSQGAGLASKIAAGIRYAADYPGVKIINLSLQQDATDASKVSTELQDAIAYA
                     EHKGLLVVAAAGNQPVATPSYPAAFPGVVSVAAIDGGSNTLAKFSRFGPWVDIAAPGV
                     GVLTLATPCSDGNCWVTPDGTSFATPIVSASAALVWAANPGMTAQQVADRLTGTADPI
                     AGTGTQFSHGEVDVGRAVTGTNVAPLAASPGSAAPGTASMSAIPGVPERTGKGYWLAA
                     SDGGMFSYGNATFLGSTGGMALNQPIVGLAATPTGNGYWLVASDGGIFSFGGAAFYGS
                     TGALPLNKPIVGIAATPSGRGYWLVASDGGIFAFGDAAFYGSTGGEPLNKPIVAMAAT
                     PTGHGYWLVASDGGIFAFGDARFFGSTGSLRLNRPIVDMAPSPQGDGYW"
BASE COUNT          350 a          984 c          953 g          369 t
ORIGIN      
        1 tgacgtagaa ctcctggagc acctggaaac tcaggcggcc ggtccgggtc ctccagaggt
       61 gttcgagcca ggcccgggcc tgcggctgct tcgccggctc gccggcgtcg cgggcgtaga
      121 cgaggacgtt cgtgtcaacg aagagcggca cggtcgtgga gctcgtcgcg tccgggatag
      181 ggcgaccggc gatgacggag cttcgtcgcc cccccgggcg agataggcgt gcatcgccgc
      241 ctcgtaccgc tcttccgagc gcatgtgctc ccgaagcagc tccccgacga ggcgggagac
      301 gctggtgtcg cgccgggccg cttccagccg ggcccagcgg gccgtgtcct cgtcgagggt
      361 gatcgtcacg ttgcgcttct ccacgacgtc agtgtagcac gaagttcgtg gcattcagcg
      421 ttgaggagat ctcagcggcg caggggggaa tcgggccgca gggtgacgaa tagaaccctg
      481 tcactcgtaa gagttgtccg gcgcggtcca ccttcgcccc aaccgtcccc cctcgttcgg
      541 ttcgggtcgg ctcgggcggg ccaccgccgg ggggatcggc ggcgcagccc ccgcgatgcg
      601 ccggcgtcag tgggaggcgg cgttgggtca ccggaccgtg gctggagggc gtatcgggcg
      661 ccgtccggcg ctggccgcca cgctcgtcgg cctggtgctg gcggcggccg gcttggcgcc
      721 ggcggtggcg gccgacaagg gcgccaaggc ttcgccggcc gcccgcccgt ccgcctccac
      781 ctcgtctggc cgccgggcga gcgcgccccg gtcggcggcc gccatcgagg acgccgccga
      841 caacgtcgac cgcctcgtcg tccgcaccag gagccagctc tcccgggccg acgagaacgc
      901 cctggcgttg tcggtcgggg gccgcaacgc cggcgacgtc cgcacggcgg tgttcgacgt
      961 tgacgtgccc cagggccggg ggcccgcggc cacccgcacg ctgcagcagg acggccgggt
     1021 ggcccacgtc gagtccgacg tccgcttcaa gtcggccgag atgccgccga ccgaccccca
     1081 gcccctcgtc ccgtccggcg ccgccaccgg ctccgaggcc ggcgccgccc cgccgccggt
     1141 caacgagcgc tgctactccg gctgcgccct gaccttcgac ggcggccaga cctcgcggat
     1201 ctacagccag tccgacttca tgaacatcgg cgccccggcg gcctgggccg tcacccacgg
     1261 cgaccccaac atgctggtgg ccgtggtcga caccgacgtc gacgccaccc agcccgacct
     1321 ggccggcaag gtgatcgtcg gcacgaactt ctccggtgac aacacgcccg atcccgaggg
     1381 ccacggcacg gccgtggccg ggctcatcgc cgccatcccg aacaacggca tcggcatcgc
     1441 cggtctcggg tggaacacca aggtgctgtc ggtgcgggtg ctcgacagcc agggggctgg
     1501 cctggccagc aagatcgccg ccggcatccg ctacgccgcc gactatccgg gcgtgaagat
     1561 catcaacctg tcgctccagc aggacgccac cgacgccagc aaggtctcca ccgagctgca
     1621 ggacgccatc gcctacgccg agcacaaggg cctcctggtg gtggcggcgg ccggcaacca
     1681 gccggtggcg acgccgagct acccggccgc cttcccgggc gtggtgtcgg tggcggcgat
     1741 cgacggcggc agcaacacgc tggccaagtt ctcccgcttc gggccgtggg tcgacatcgc
     1801 cgcccccggt gtcggcgtcc tcacgctggc tactccgtgc agcgacggga actgctgggt
     1861 cacgcccgac ggcacgtcgt tcgccacgcc gatcgtctcg gcgtccgccg ccctcgtctg
     1921 ggccgccaac ccggggatga ccgcccagca ggtcgccgac cggctcaccg gcaccgccga
     1981 ccccatcgcc ggaaccggga cccagttcag ccacggtgag gtcgacgtcg gccgggccgt
     2041 caccggcacc aacgtcgcgc cgttggcggc gtcgcccggg tcggcggcgc cggggacggc
     2101 gtcgatgtcg gccattcccg gggtgccgga gcggaccggg aagggctact ggctggcggc
     2161 gtccgacggc gggatgttca gctacggcaa cgccacgttc ctcggctcca ccggagggat
     2221 ggccctcaac cagcccatcg tcggcctggc cgccaccccg accggaaacg ggtactggct
     2281 ggtggcgtcg gacgggggca tcttctcctt cggcggggcc gccttctacg gctcgaccgg
     2341 ggcgctgccg ctcaacaagc cgatcgtcgg catcgcggca actccgtcgg ggcggggcta
     2401 ctggctggtg gcgtcggacg gtggcatttt cgccttcggc gacgcggcgt tctacgggtc
     2461 gaccggaggg gagccgctca acaagccgat cgtggcgatg gcggccacgc cgaccgggca
     2521 cgggtactgg ctggtggcgt ccgacggcgg gatcttcgcc ttcggcgacg cccggttctt
     2581 cggctcgacc ggcagcctcc ggctgaaccg gccgatcgtc gacatggcgc cgtccccgca
     2641 gggtgacggc tactgg
//
LOCUS       DATGJT010000136         3039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_432629, whole genome shotgun sequence.
ACCESSION   DATGJT010000136 DATGJT010000000
VERSION     DATGJT010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432629"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..694)
                     /locus_tag="VKX24_02350"
     CDS             complement(8..694)
                     /locus_tag="VKX24_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013132529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HLJ07352.1"
                     /translation="MRVAIAGAGNVGQFIANDLAEGGHQVLIIEQDPGVVSRAAPTLT
                     GPRGDGGSIEWHTADACEVTSLREADIGAVDVVVAATGDDEDNLVISLLAKQEFAVPR
                     VVARVNHPKNEWLFNENWGVDVAVSTPHLILALTEEALSVGSLVRLLQLEKGRARLVE
                     VTLAEDAPVIGPSIRELNIPRDSTFVAIVREDHVVVPRGDTVFQVGDEVIALVTPESE
                     DEIRRILTGK"
     gene            complement(697..1359)
                     /locus_tag="VKX24_02355"
     CDS             complement(697..1359)
                     /locus_tag="VKX24_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014135787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HLJ07353.1"
                     /translation="MHVVVVGCGRVGSELAGTLEKDGHSVAVLDKNASAFRRLPAGFG
                     GTTVVGFGFDRDDLLEAGIERAGALAAVTNGDNSNILTARIARENFGIEHVVARIYDP
                     RRALIYQRLGIPTVATVSWATDQVLRRLLPGEVKADWSDPSAKICVVERALPAAWAGK
                     KLSGLNEPGRFWLTAVTRLGSARIVTADVVGQEGDTVTFTAATDALDALSQRLEGGKE
                     AH"
     gene            1413..>3039
                     /locus_tag="VKX24_02360"
     CDS             1413..>3039
                     /locus_tag="VKX24_02360"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HLJ07354.1"
                     /translation="MSPVYQALKRLLVGRPLSSAEQEHQRLTKKIALAVFSSDAISST
                     AYATEEILRVLVPLGGLAAIDDLIPIAIVVVILLAIVAFSYRQTIFAYPNGGGSYIVS
                     RDNLGTTPSLVAGASLLTDYTLTVSVSVAAGVAAITSAFPSLQGETVPLCLLIVALIT
                     VANLRGIKESGRTFAVPTYLYIIMLVLLLVFGLFRSFTGRLHPIPVDHAALAEVTHHA
                     AVLKGITLFALLRAFSSGAVALTGIEAISNGVPAFQRPESRNASTTLIAMATILGTTF
                     FGVSLLVHRLHPTLQPEGKETILSLLGRNVFGHNVFYFVLQVATAAILTLAANTAYAD
                     FPRLSSIIARDGFLPRQLFNRGDRLVFSNGVLTLAVLASILLIVVNGEVTRLIPLYAV
                     GVFTAFTLSQWGMVQHHRREHEPGWKRSMVINAVGSLATGIVLVIVAVSKFTKGAWLP
                     VIVIPSLVLLLKGIHRHYDRVRRSLAVPDDWRPPRLNHTVVVLVGGVHRGVLEAMAYA
                     RSLNPDHLVAVTVVSDEEEQERIEEGWAAHGLEV"
BASE COUNT          403 a         1131 c         1007 g          498 t
ORIGIN      
        1 cccggcttta cttgccggtc aggatccggc ggatctcgtc ctcggactcc ggcgtcacca
       61 gggcgatcac ctcgtcgccg acctggaaca cggtgtcgcc ccgggggacg acgacgtggt
      121 cctcccggac gatggccacg aacgtcgagt cgcgggggat gttgagctcc cggatgctgg
      181 gcccgatgac gggggcgtcc tccgccaggg tcacctccac cagccgggcc cggcccttct
      241 ccagctgcag cagccggacg aggctgccga ccgacagcgc ctcctcggtc agcgccagga
      301 tgaggtgcgg ggtcgacacc gccacgtcga cgccccagtt ctcgttgaac agccactcgt
      361 tcttcggatg gttgacccgg gccaccaccc ggggcacggc gaactcctgc ttggccagca
      421 gcgagatgac gaggttgtcc tcgtcgtcgc cggtggcggc caccaccacg tcgacggcgc
      481 cgatgtcggc ttcccgcagc gacgtcacct cgcaggcgtc ggcggtgtgc cactcgatgc
      541 tgccgccgtc cccccggggg ccggtgagcg tcggtgcggc ccggctgacg acgccggggt
      601 cctgttcgat gatcagcacc tggtggccgc cctcggccag gtcgttggcg atgaactggc
      661 cgacgttgcc ggccccggcg atggccaccc tcacagctag tgcgcttcct tcccgccctc
      721 gaggcgctgg ctcagggcgt cgagggcgtc ggtggcggcg gtgaaggtca ccgtgtcgcc
      781 ctcctggccg acgacgtcgg cggtgacgat ccgggccgat cccaaccgcg tgacggccgt
      841 cagccagaag cggcccggct cgttcagccc cgagagcttc tttcccgccc acgccgccgg
      901 gagggcccgc tcgacgacgc agatcttggc gctggggtcg gaccagtcgg ccttcacctc
      961 gccgggcagc agccggcgga gcacctggtc ggtggcccag ctcaccgtgg ccacggtcgg
     1021 aattcccagc cgctggtaga tgagggcccg gcgggggtcg tagatccggg ccacgacgtg
     1081 ctcgatgccg aagttctccc gggcgatgcg ggccgtgagg atgttggagt tgtcgccgtt
     1141 ggtcacggcg gcgagggcgc cggcccgctc gatccccgcc tcgagcaggt cgtcccggtc
     1201 gaagccgaag ccgaccaccg tcgtgccgcc gaacccggcg ggcaggcgcc ggaaggcgct
     1261 ggcgttcttg tccaggacgg cgacgctgtg gccgtccttc tccagagtcc cggcgagctc
     1321 gctgcccacc cggccgcaac ctacgacgac gacgtgcacg ggcgggatcg taacccagcg
     1381 tgcttccgcg ggcccgtccg gcagatggca ggatgagccc cgtgtaccag gccctgaaac
     1441 gcctgctggt cgggcggccg ctgtcgagcg ccgagcagga gcaccagcgg ctgacgaaga
     1501 agatcgccct ggccgtcttc tcctccgacg ccatctcctc caccgcctac gccaccgagg
     1561 agatcctccg ggtcctcgtg ccgctgggcg ggctcgccgc catcgacgac ctcatcccca
     1621 tcgccatcgt ggtggtgatc ctgctggcca tcgtggcctt cagctaccgc cagacgatct
     1681 tcgcctaccc gaacggcggc ggcagctaca tcgtctcccg cgacaacctc gggacgacgc
     1741 cctcgctggt ggcgggagcg tcgctgctga ccgactacac gctgacggtg tcggtgtcgg
     1801 tcgccgccgg cgtggccgcc atcacgtcgg ccttcccgag cctccagggc gagaccgtgc
     1861 cgctgtgcct gctcatcgtg gcgctgatca ccgtggccaa cctgcggggg atcaaggagt
     1921 cgggccggac gttcgccgtt cccacctacc tctacatcat catgctggtc ctgctgctgg
     1981 tcttcgggct gttccggtcg ttcaccggcc ggctgcaccc gatcccggtg gaccacgccg
     2041 ccctggccga ggtcacccat cacgccgccg tgctgaaggg gatcaccctc ttcgccctgc
     2101 tgcgggcctt cagctccggc gccgtcgccc tcaccgggat cgaggccatc agcaacggcg
     2161 tgccggcctt ccagcggccc gagtcgagga acgcctccac gacgctgatc gccatggcca
     2221 ccatcctcgg cacgacgttc ttcggggtgt cgcttctcgt tcaccggctc caccccacgc
     2281 tccagcccga ggggaaggag acgatcctgt cgcttctcgg acggaacgtc ttcggccaca
     2341 acgtcttcta cttcgtcctc caggtggcca ccgccgccat cctgaccctg gcggcgaaca
     2401 ccgcctacgc cgacttcccg cgcctgtcgt cgatcatcgc ccgggacggt ttcctgcccc
     2461 gccagctgtt caaccggggc gaccggctgg tgttctccaa cggcgtcctc acgctggccg
     2521 tgctggcgtc gatcctgctc atcgtcgtca acggcgaggt gacccgcctg atcccgctct
     2581 acgccgtcgg cgtcttcacc gccttcaccc tctcccagtg gggcatggtg cagcaccacc
     2641 gccgggagca cgagccgggc tggaagcggt cgatggtgat caacgccgtg ggctcgctgg
     2701 ccacgggcat cgtgctcgtc atcgtggccg tgtcgaagtt caccaagggg gcgtggctgc
     2761 cggtcatcgt catcccctcg ctggtcctgc tgctgaaggg aatccatcgg cactacgacc
     2821 gggtgcgaag gtcgctggcc gtgcccgacg actggcgtcc gccccggctc aaccacacgg
     2881 tcgtggtcct cgtcgggggc gtccaccgcg gcgtgctcga ggccatggcc tacgcccgct
     2941 ccctcaaccc cgaccacctc gtggccgtca ccgtcgtgtc cgacgaggag gagcaggagc
     3001 gcatcgagga gggctgggcg gcccacgggc tcgaggtcc
//
LOCUS       DATGJT010000137         2446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1470778, whole genome shotgun sequence.
ACCESSION   DATGJT010000137 DATGJT010000000
VERSION     DATGJT010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470778"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VKX24_02365"
     CDS             complement(<1..696)
                     /locus_tag="VKX24_02365"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ07355.1"
                     /translation="MGRLDNRVAIVTGAGRGIGAATAKLFAAEGAQVVVNDVDPAPAT
                     EVVEEITAAGGQALVNADNAVEPAGAAALIARAVDGFGRLDILVNNAGITRDKMFHTM
                     DAATFNFVLDVNLHTALNATRAAVEHMRSAAKAEQASGGGPAYHRKITMTSSTSGLMG
                     NAGQSNYATAKMALIGLARTLAIELGPFHVNVNVVAPGFIETRLTAPKEKSEDPDLGI
                     PEGLRNLAMMMIPL"
     gene            complement(710..874)
                     /gene="rpmG"
                     /locus_tag="VKX24_02370"
     CDS             complement(710..874)
                     /gene="rpmG"
                     /locus_tag="VKX24_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019632658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HLJ07356.1"
                     /translation="MASSDKRPHVILACSECKRRNYITTKNRSKQQGRIEMKKYCRWC
                     RCHRVHRETR"
     gene            complement(884..2071)
                     /gene="tuf"
                     /locus_tag="VKX24_02375"
     CDS             complement(884..2071)
                     /gene="tuf"
                     /locus_tag="VKX24_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020463479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HLJ07357.1"
                     /translation="MAKKKFERTKPHVNIGTIGHIDHGKTTLTAAITKVLATKGWADF
                     TPFDQIDKAPEERARGITIAIAHVEYQTEKRHYAHVDCPGHADYIKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHVLLARQVGVPYIVVAMNKVDMVDDPEILDLVELEVRELLSS
                     YEFPGDDVPVVRVSALKALQGDPEAEKGIFELMDACDTYIPEPVRDIDKPFLMPIEDV
                     FTITGRGTVVTGRIERGKIKVSDEVEIVGIAKATRKSVCTGVEMFRKLLDEGQAGDNV
                     GILLRGVNKDEVERGQVLAKPGSITPHTEFEGQVYVLSKDEGGRHTPFFNNYRPQFYF
                     RTTDVTGSVDLPEGTEMVMPGDNTSMKVELIQPIAMEEGLRFAIREGGRTVGAGRVTK
                     IYK"
     gene            complement(2193..2264)
                     /locus_tag="VKX24_02380"
     tRNA            complement(2193..2264)
                     /locus_tag="VKX24_02380"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2230..2232),aa:Met,seq:cat)
     gene            complement(2375..2446)
                     /locus_tag="VKX24_02385"
     tRNA            complement(2375..2446)
                     /locus_tag="VKX24_02385"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2412..2414),aa:Thr,seq:ggt)
BASE COUNT          365 a          818 c          799 g          464 t
ORIGIN      
        1 caacgggatc atcatcatcg ccaggttgcg cagaccctcg gggatgccca gatccgggtc
       61 ctcggacttc tccttcgggg cggtcagccg ggtctcgatg aaacccggcg ccaccacgtt
      121 gacgttgacg tggaacgggc cgagttcgat cgccagcgtc cgggcgaggc cgatcagcgc
      181 catctttgcg gtggcgtagt tcgactgacc ggcgttgccc atgaggccgg aggtggatga
      241 ggtcatcgtg atcttgcggt ggtaggcggg gccaccgccg gaggcctgct cggccttggc
      301 cgccgatcgc atgtgctcga cggcggcccg ggtggcgttg agggcggtgt ggagattgac
      361 gtcgaggacg aagttgaacg tcgccgcgtc catcgtgtgg aacatcttgt cccgggtgat
      421 gccggcgttg ttcaccagga tgtccaggcg accgaagcca tcgacggccc gggcgatcag
      481 cgcggcggca cccgccggtt ccaccgcgtt gtcggcgttg accagggcct ggcccccggc
      541 ggcggtgatc tcctcgacga cctccgtcgc cggggcgggg tcgacgtcgt tgaccacgac
      601 ctgcgcccct tcggcggcga acagctttgc cgtggccgcg ccgatccccc ggccggcgcc
      661 ggtgacgatc gcaacacggt tgtccagtcg gcccatagct tcggccggcc tagcgcgttt
      721 cccggtgcac ccggtgacag cggcaccagc ggcagtactt cttcatctcg atccggccct
      781 gctgcttgga ccggttcttg gtggtgatgt agttgcgccg cttgcactcg ctgcacgcca
      841 ggatgacgtg gggtcgcttg tcgctcgatg ccatcgcagg tccctacttg tagattttcg
      901 tcacccggcc ggcacccacg gtacgcccac cctcccggat ggcgaagcga aggccctcct
      961 ccatggcgat cggctggatc agctcgacct tcatcgaggt gttgtcgccg ggcatcacca
     1021 tctcggtgcc ctcggggagg tcgaccgagc cggtgacgtc ggtggtccgg aagtagaact
     1081 gcggccggta gttgttgaag aacggcgtgt gccgccctcc ctcgtccttg gacaggacgt
     1141 agacctggcc ctcgaactcg gtgtgcgggg tgatcgagcc gggcttggcc agcacctggc
     1201 cacgctcgac ttcgtccttg ttgacacccc gcagcaggat gccgacgttg tcgccggcct
     1261 ggccctcgtc cagcagcttg cggaacatct cgacgccggt gcagaccgac ttgcgggtcg
     1321 ccttggcgat gccgacgatc tccacctcgt ccgagacctt gatcttgccg cgctcgatcc
     1381 ggccggtgac gacggtgccg cggccggtga tcgtgaacac gtcctcgatc ggcatcagga
     1441 acggcttgtc gatgtcgcgg accggctccg ggatgtaggt gtcgcaggca tccatcagct
     1501 cgaagatgcc cttctccgcc tccgggtcgc cctggagcgc cttcagcgcc gacacccgca
     1561 cgaccggtac gtcgtcgccc gggaactcgt agctgctcag cagctcgcgc acctcaagct
     1621 cgaccaggtc gaggatctcc gggtcgtcaa ccatgtcgac cttgttcatg gccaccacga
     1681 tgtagggcac gccgacctgg cgggcgagca gcacgtgctc ccgggtctgc ggcatcgggc
     1741 cgtcggcggc cgagacgacc aggattgcgc cgtccatctg ggcggcaccg gtgatcatgt
     1801 tcttgatgta gtcggcgtga ccggggcagt cgacgtgcgc gtagtggcgc ttctcggtct
     1861 ggtactcgac gtgggcgatg gcgatcgtga tgccgcgagc ccgctcctcg ggagccttgt
     1921 cgatctggtc gaacggggtg aagtccgccc agcccttcgt cgccaggact ttggtgatgg
     1981 ccgcggtaag cgtggtcttg ccatggtcga tgtgaccgat ggtgccaata ttcacgtgag
     2041 gcttggtacg ttcaaacttc ttcttcgcca tcgcctacct cccaacacct ttccctgtct
     2101 accccgcccg ggttggcccg gacataagga cgccttttcc tctggttccg ccctgcccac
     2161 ccgccctcat gcgggggaga cttccaggcc ggtagcggcg ggcggattcg aaccgccgac
     2221 acagcgatta tgagccgctt gctctacccc tgagctacgc cgccagatgc tatcagacag
     2281 ggggccgcca acctcagtga cccctcgaaa ccatcaaact tgatgaaaca cactggagcc
     2341 ttaacacacc ggaccaccgg gggctatcgc cgggagcccc ctcgcggaat cgaaccgcgg
     2401 acaccggcct taccatggcc gtgctctgcc gactgagcta aggggg
//
LOCUS       DATGJT010000138         2552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_641349, whole genome shotgun sequence.
ACCESSION   DATGJT010000138 DATGJT010000000
VERSION     DATGJT010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_641349"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(276..875)
                     /locus_tag="VKX24_02390"
     CDS             complement(276..875)
                     /locus_tag="VKX24_02390"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HLJ07358.1"
                     /translation="MLRSRALLAALLVVAAAAPAPAGAAPPPAAVAPAGAWSPPVAAP
                     VVRGFEPLERPFGPRHLGLDYAVPPGTPVSAAGDGVVAFAGRVGRDAFAVAVDHVGGR
                     RTTYAYLARVDVRPGAPVRRGDVLGESGAAGPGHGPGMVHLGYRVDGRPEDPAPLFAT
                     PPARISLAPLDRPACHWPARPPRTGVPFPPYPGKGTPVR"
     gene            complement(968..1738)
                     /gene="whiG"
                     /locus_tag="VKX24_02395"
                     /pseudo
     CDS             complement(968..1738)
                     /gene="whiG"
                     /locus_tag="VKX24_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014145159.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor WhiG"
     gene            complement(1757..>2552)
                     /locus_tag="VKX24_02400"
     CDS             complement(1757..>2552)
                     /locus_tag="VKX24_02400"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HLJ07359.1"
                     /translation="DRGGAGGPESVDHLVLRRYLAYLTTRGMARPTIARKAAALRAFF
                     GWLRRRGVLAADPTRNLRAPKGDRRLPRVPKAAEVATLLDDGPPAAEDDAVATAVALR
                     DAAVLEVLYGAGLRISELCGLRPSDVDLRTGLVTVLGKRSKIRRVPLGEGAMAAIPAY
                     LAAGRTNLSGPLTPPDALFLNRRGRRLTPRDARRILQRRLLSDGRAISPHSLRHAYAT
                     HLLEGGADLRAVQELLGHADVATTQLYTHLTKDRLRAVYDATHPRA"
BASE COUNT          350 a          872 c          995 g          335 t
ORIGIN      
        1 tcatggtcac gacagccaca aggaagacgt cctttcgtcg gttggcgatc gtccgcccgc
       61 tgttgatgcg ccgcaggggc gcacaccgat ggactgctgc gggcgtgtga atttcccggc
      121 cggggagccg ggataccgcc cagtgtagcc ggacaggcac gacgtcctcc gagggaccgt
      181 cgcgctgctc ggcgccgccc ggtgtcggtt caaaccggcg ttcgtttgcc gggatacagc
      241 ggaaatcgaa cgccagaagg gtcgccggcc ggcgctcagc gaactggcgt tcctttaccg
      301 ggatagggcg gaaaaggaac gccggttcgg ggagggcggg cgggccagtg gcaggctggg
      361 cggtcgaggg gggcgagcga gatccgggcc ggcggggtgg cgaagagcgg cgccgggtcc
      421 tccggccggc cgtcgacccg gtagccgagg tggaccatgc cgggcccgtg gcccgggccg
      481 gcggcgccgg attcgccgag gacgtcgccc cggcggacgg gcgccccggg ccgcacgtcg
      541 acccgcgcca ggtaggcgta cgtcgtgcgc cgcccgccga catggtcgac ggccacggcg
      601 aaggcgtcgc gtccgacccg gccggcgaag gccacgacgc cgtcgcccgc ggcggatacc
      661 ggcgtacccg gcggcacggc gtagtccaac ccgaggtgcc gggggccgaa tggccgctcc
      721 agcggctcga agccccgcac gaccggcgcc gcgaccggcg gagaccacgc cccggccgga
      781 gcgacggcgg cgggcggcgg ggcggcgccg gccggcgccg gagcggcggc ggccaccacc
      841 aggagcgccg ccagcaacgc tcgacttcgg agcatctcgt cctcccgggc tcgtcggaac
      901 cgatccgggg gaagagcggg gaacctccgg ggatcctagg gccggcccgg gcggcgccgc
      961 aggcgaatta cccggcgagg ccccgttcgg gttcgagcag gcgggagcgg agctggagga
     1021 tgcccttggt atggatctgg cagacccggc tctcggtcac gcccagcacc tggccgatct
     1081 cggccagcgt caggccctcg tagtagtaga gcgtgaggac gaggcgctcc cgctccggca
     1141 tcccctcgac ggcctcggcc aggatgtgct tgatctcctg gacctcgaag gcctcgacgg
     1201 ggtcgtcggt gccgtcggcg atcgtgtcgg cgagcgtcga ctggccgccc tcgccggagt
     1261 cggcaccgct gagcagctcg tcgaggggca cgatgccgac cagcgagatc tgggacagcg
     1321 tctgggtgaa ctgctcccgg gtcatcgaca gctcggagac gacctcgtgc tcctccggag
     1381 tgcggtggag ctccccctcc agcttggcgt aggcccgctc gatggcccgg gccttggccc
     1441 gcacggagcg gggcacccag tcgatcgtcc gcagctcgtc gatgatggcg cccttgatcc
     1501 gggacatggc gtaggtctcg aacttgtagc cccgggtcag gtcgaacttc tcgatggcgt
     1561 ccatcaggcc gaagatgccg tagctgacca ggtcggactg ctcgacgttc tggggcagcc
     1621 cgacggcgac acggccggcc acgaacttga ccagcggcga gtagtggagg atcagccggt
     1681 cgcgcaggtc gcggcgaccg gtcgccttgt actcctgcca gagttcctcg atcacgctgg
     1741 cgtcgtccac aggttcctaa gcgcgggggt gggtcgcgtc atagaccgcc cgcaggcggt
     1801 ccttggtgag atgagtgtat agctgggtgg tcgccacatc ggcgtgtccg agaagctcct
     1861 ggacggcccg gaggtcggcg cccccttcca gaagatgggt ggcgtaggcg tggcggaggc
     1921 tgtgggggct gatggcgcga ccgtcgctga gcagccgacg ttggaggatc cgccgggcgt
     1981 cgcggggggt caggcgacgg ccccggcggt tcaggaacag ggcgtcgggg ggcgtgagcg
     2041 gcccggagag atttgtccgc ccggcggcga gatacgccgg gatcgcggcc atcgcgccct
     2101 cgccgagcgg tacccgccgg atcttcgacc gcttgccgag gacggtcacc aggccggtcc
     2161 gcaggtcgac gtccgacggc cggagcccgc acagctcgct gatccgcagg ccggcgccgt
     2221 agagcacctc gaggacggcg gcgtcacgga gcgcgaccgc cgtcgccacg gcgtcgtcct
     2281 cggcggcggg cggcccgtcg tcgaggagcg tcgccacctc ggccgccttc ggcaccctgg
     2341 gcagccgccg gtcgcccttc ggcgcccgga gattgcgggt cgggtcggcg gcgaggacgc
     2401 cccgccggcg cagccagccg aagaaggccc ggagcgccgc cgccttgcgg gcgatggtgg
     2461 gccgggccat gccccgggtc gtgaggtagg cgaggtaccg ccgcagcacg aggtggtcga
     2521 cggattccgg gccgcccgcg ccgccgcgat cg
//
LOCUS       DATGJT010000139         3265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_18817, whole genome shotgun sequence.
ACCESSION   DATGJT010000139 DATGJT010000000
VERSION     DATGJT010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3265
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18817"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VKX24_02405"
     CDS             complement(<1..538)
                     /locus_tag="VKX24_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005449321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLJ07360.1"
                     /translation="MAATTISELFDPAAWKGVDGFDFTDLTYHRAVDAGVVRIAFDRP
                     EVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGRAFCSGGDQRIRGRT
                     GYQYASGETADTVDPARAGRLHILECQRLIRFMPKFVIALVNGWAAGGGHSLHVVCDM
                     TLASAEHARFKQTDADVGS"
     gene            647..1969
                     /locus_tag="VKX24_02410"
     CDS             647..1969
                     /locus_tag="VKX24_02410"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HLJ07361.1"
                     /translation="MNPSGPRHVPAWLETATAIAWRVVAVVAAGFLIVLALSRLTVVV
                     VPVIGALFVSAILVPPARWLRRRGCPALLATWAVFLSAVAIVVGIGAWLVPRVADQWD
                     PLRQSLAQNVDDTRNWLIDGPLHLSPSQVDRYASEAKDIIAGNRGSSPAKSGSGASGG
                     ATPPASTPPATGGSGGGGSATSGSGGGGSSAGSAAGSGLSTGAVIGGRILRGAASGLR
                     LLVHLLAALILTLVISFFFVKDGSAMSDWFLDQLQPSSAATVRAIGTRSWLTLTGYVR
                     GTAVNGLVNATLMSIGLLILHVPLVPVIAVLTFFGGFFPIVGAFVSGGVAAAVALVAK
                     SPATALLVVGLTVIIHHVEGYLVGPIVLGRAVRLHTVVVLLALAAGGELAGVLGAFVA
                     VPLTAVIVGIVDELRHGEAARAASASAASTAATVAAEAPAPRIARRSF"
     gene            2015..>3265
                     /locus_tag="VKX24_02415"
     CDS             2015..>3265
                     /locus_tag="VKX24_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07362.1"
                     /translation="MIDVRRLVASPRPHERLTPRASRVGDHVHLQLRRVWPDQAGRFV
                     AALSDGLSDLPVVWVDVRLLDGLLVLALDPGAAHGAHGADRADPADRADERTVAAVVA
                     AVEAAEARAGLDCNPFPEHRHGSPVEDEPLLRAAAEVVADVFSFGLGVTLRALQVPRP
                     PIEVDVEGIVALVQNVPGLRRTLARWVGRATAEATAGLAAALAGGVFQNLVSPVVGVA
                     YHSLRLGELRARQEAWLAAEPRLYGPSAEASAAGASSEVAERPLPRPPGPVERTAEMT
                     WVASLGTFVATLPLLGSVENALSMLASGAPKAARLGREAFGSHLSRDLGRRGIVVLRP
                     GSLRLLDQVDVVVIDGRLWNGASEAGARLERVAAANDLGLIVVGGPGRGARAGKRSRG
                     GSEGAADEAVLRVPASAGPGEVRRL"
BASE COUNT          331 a         1170 c         1294 g          470 t
ORIGIN      
        1 aggagccgac gtcggcgtcg gtctgcttga agcgggcgtg ctcggcgctg gccagcgtca
       61 tgtcgcagac gacgtggagc gagtgcccgc cgcccgccgc ccagccgttg acgagggcga
      121 tgacgaactt cggcatgaac cggatcagcc gctggcactc caggatgtgg agccgaccgg
      181 cccgggcggg gtcgacggtg tcggccgttt cgccgctggc gtactggtag ccggtccggc
      241 cccggatgcg ctggtcgccg ccggagcaga aggcccggcc gccgtccttc gggctcgggc
      301 cgttgccggt gaggaggacg cagccgacgt cgggcgacat gcgggcgtgg tcgagggccc
      361 ggtagagctc atcgaccgtg tggggccgga aggcgttccg gacctcgggg cggtcgaagg
      421 cgatgcggac gacgccggcg tcgaccgccc ggtggtacgt gaggtcggtg aagtcgaagc
      481 cgtcgacacc tttccaggcg gccgggtcga acaactccga gatcgtcgtg gcggccatgg
      541 cccgcacagt agggccggcg ccggcgccgg gcgggctcga cgaccggccc ggccgttctc
      601 cgaccgatct tcgattcgcc tggccgccgt cgggcagact gagggcatga atccctccgg
      661 gccccggcac gtgccggcct ggctggagac ggcaacggcg atcgcctggc gcgtcgtggc
      721 cgtcgtggcg gccgggttcc tgatcgtcct ggcgttgtcg cggttgacgg tcgtggtcgt
      781 gccggtgatc ggggcgctgt tcgtctcggc catcctcgtg ccgccggccc gctggctgcg
      841 ccggcgcggg tgcccggcgt tgctggccac gtgggcggtg ttcctctccg cggtggcgat
      901 cgtggtcggg atcggcgcct ggctcgtgcc ccgggtggcc gaccagtggg acccgctccg
      961 gcagtcgctg gcccagaacg tcgacgacac ccgcaactgg ctgatcgacg gaccgctgca
     1021 cctgtcgccg tcgcaggtcg accgctacgc ctccgaggcc aaggacatca tcgccgggaa
     1081 ccgcggctcc tcgccggcga agagcggctc cggcgccagc ggcggcgcca cccctccggc
     1141 cagcactccg ccggccaccg gcggctcggg cggcggcggc tcggccacca gcggttcggg
     1201 cggcggcggc tcgagcgccg gctcggcggc cgggagcggg ctgtccaccg gcgcggtgat
     1261 cggcggccgg atcctgcggg gcgcggccag cggcctccgg ctgctggtgc atctcctcgc
     1321 cgctctgatc ctgacgctcg tcatctcgtt cttcttcgtg aaggacggca gcgccatgag
     1381 cgactggttc ctcgaccagc tgcagccgtc gtcggcggcg accgtgcgag ccatcggcac
     1441 ccggagctgg ctgacgctga cgggctacgt gcggggcacg gcggtgaacg gcctcgtcaa
     1501 cgccacgctg atgtcgatcg ggctgctgat cctccacgtg ccgctggtgc cggtcatcgc
     1561 cgtgctcacg ttcttcggcg gcttcttccc gatcgtcggc gccttcgtca gcggcggcgt
     1621 ggccgccgcg gtggctctgg tggccaagag cccggcgacg gcgctgctgg tggtggggct
     1681 caccgtgatc atccaccacg tcgaggggta cctcgtcggg cccatcgtcc tcggccgggc
     1741 ggtgcggctg cacacggtcg tggtcctgct ggcgctggcc gccggcggtg agctggccgg
     1801 cgtgctcggc gccttcgtcg ccgtcccgct gacggcggtc atcgtgggga tcgtcgacga
     1861 gctccgccac ggcgaggcgg cccgggcggc ctcggcgtcg gcggcttcga ccgcggcgac
     1921 ggtggccgcc gaggcacccg caccccggat cgcccggcgt tcgttctaag gcgttggggt
     1981 cgccgccgcc gggtccgtgg gtaggagtcc ggcggtgatc gacgttcggc gcctggtggc
     2041 gtcgccgcgg ccgcacgagc ggctcacgcc ccgggcgagc cgggtcggcg atcacgtcca
     2101 cctccagctc cggcgggtgt ggcccgacca ggcgggccgg ttcgtcgccg ccctgtccga
     2161 cgggctgagc gacctgccgg tcgtctgggt cgacgtccgc ctcctggacg ggctgctggt
     2221 gctggcgctc gacccgggcg ccgcccacgg cgcccacggc gccgaccgcg ccgaccccgc
     2281 cgaccgcgcc gacgagcgga cggtggccgc cgtggtggcc gccgtcgagg ccgccgaggc
     2341 ccgggcgggg ctcgactgca acccgttccc ggagcaccgc cacggctcgc cggtggagga
     2401 cgagccgctc ctgcgggcag cggccgaggt cgtcgccgac gtgttctcct tcggactcgg
     2461 cgtcacgctg cgggcgctcc aggtgccgcg tccgccgatc gaggtcgacg tggaagggat
     2521 cgtcgccctg gtccagaacg tgcccggcct gcggcggacc ctggcccgct gggtcggccg
     2581 ggccaccgcc gaggccaccg ccgggctggc ggcggcgctg gccggcgggg tgttccagaa
     2641 cctcgtgagc ccggtggtcg gcgtcgccta ccacagtctc cgcctcggcg agctccgggc
     2701 ccggcaggag gcgtggctgg ccgccgagcc ccggctctac gggccgtcgg cggaggcgtc
     2761 ggcggccggg gcgtcgtcgg aggtggccga gcgtccgctc ccccggccgc ccgggccggt
     2821 cgagcggacg gcggagatga cgtgggtcgc ctcgctcggg acgttcgtgg ccacgttgcc
     2881 gctcctgggc agcgtcgaga acgcgctgtc gatgctggcc agcggggcgc cgaaggcggc
     2941 ccggctcggc cgggaggcgt tcggctcgca tctgagccgc gatctcggcc ggcggggcat
     3001 cgtcgtcctc cgaccgggtt cgctgcgatt gctcgaccag gtcgacgtcg tcgtgatcga
     3061 cggccggctg tggaacggtg caagcgaggc cggcgcccgg ctcgaacggg tggcggcggc
     3121 caacgatctc ggcctgatcg tggtgggagg gccggggcgc ggcgcccgcg ccggcaagcg
     3181 gagccggggg ggttccgagg gcgccgccga tgaggcggtg ctgcgcgtac cggcctccgc
     3241 cgggcccggc gaggtacgcc gcctg
//
LOCUS       DATGJT010000140         2282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_952782, whole genome shotgun sequence.
ACCESSION   DATGJT010000140 DATGJT010000000
VERSION     DATGJT010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952782"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1461
                     /locus_tag="VKX24_02420"
     CDS             <1..1461
                     /locus_tag="VKX24_02420"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020577463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HLJ07363.1"
                     /translation="DLDLGHYERFVDVALHRDSNATTGSIYTTVLGKERRGDYLGATV
                     QVIPHITDEIKERIRRLATDDVDIVITEIGGTVGDIEILPFLEAIRQFRKDVGRENVF
                     YIHVTLVPFIGPSGEQKTKPTQHSVTELRSRGIQPDAIVCRSDRPISTRLKEKISKLC
                     DVPEEGIVSAIDTPNIYEIPLVLHDEGLDAYIGRVLGLPVAPAELGPWRSLVSRVERA
                     TTEVRIGLVGKYVNLPDAYLSVVEALKHGGYAHGAKVVIDWIASEDAEGLLAEGRLHD
                     LDGIVVPGGFGVRGVEGKIAAVTYAREHKVPFLGLCLGLQCAVIEFARNVVGLAGANS
                     SEFDHATPHPVIDLMDDQREVVDKGGTMRLGSYPAVLGADTLVRDAYGAEVIYERHRH
                     RYEFNPRYRRRLEEAGLRCSGTSPDDRLVEFVELSTADHPFFVATQAHPEFKSRPNRP
                     HPLFRELVRAALARAESRTPRLPLPEDAEGVALATT"
     gene            1471..2046
                     /locus_tag="VKX24_02425"
     CDS             1471..2046
                     /locus_tag="VKX24_02425"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HLJ07364.1"
                     /translation="MSGYRLVDSREIARGGFLTFAEETFESPAGERFVRWMVEHPGAV
                     AAVPVEGGPGGPQVVLVRQWRPALRDLLLEIPAGKLDVPGEAPDDAMARELAEEIQQV
                     AGRLVKLATFWNSPGFSTELTHVYIALDLSPCDRPEAAKEEEQDMTIERVPLADTGRL
                     IAAGQITDAKTIIGLALAERYLAGEQPEAVA"
     gene            2108..>2282
                     /locus_tag="VKX24_02430"
     CDS             2108..>2282
                     /locus_tag="VKX24_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HLJ07365.1"
                     /translation="MVVGVPKETKVNEYRVAVTPDGVSELVHHGSTVVIETGAGVGAA
                     ITDEEYLRAGAQIA"
BASE COUNT          346 a          835 c          788 g          313 t
ORIGIN      
        1 gacctcgacc tcgggcacta cgagcgcttc gtcgacgtcg ccctccaccg cgactccaac
       61 gccaccaccg gctcgatcta caccacggtg ctgggcaagg agcgccgggg cgactacctc
      121 ggcgccaccg tccaggtcat cccccacatc accgacgaga tcaaggagcg gatccgccgc
      181 ctggccaccg acgacgtcga catcgtcatc accgagatcg gcggcaccgt cggcgacatc
      241 gagatcctcc cgttcctgga ggccatccgg cagttccgca aggacgtcgg ccgggagaac
      301 gtcttctaca tccacgtcac gctggtgccg ttcatcggcc cgtcggggga gcagaagacc
      361 aagccgacgc agcactcggt gaccgagctg cgctcccggg gcatccagcc cgacgccatc
      421 gtctgccgct ccgaccggcc gatctccacc cggctgaagg agaagatctc caagctctgc
      481 gacgtgcccg aggaggggat cgtctcggcc atcgacacgc ccaacatcta cgagatcccg
      541 ctggtgctcc acgacgaggg cctcgacgcc tacatcggcc gggttctcgg gctgccggtg
      601 gccccggccg agctcgggcc gtggcgcagc ctcgtgtccc gggtggagcg ggcgacgacc
      661 gaggtccgca tcggcctcgt cggcaagtac gtcaacctgc ccgacgccta cctgtcggtg
      721 gtcgaggccc tcaagcacgg cggctacgcc cacggcgcca aggtcgtgat cgactggatc
      781 gcctcggagg acgccgaagg cctcctggcc gagggccggc tccacgacct cgacgggatc
      841 gtcgttcccg gcgggttcgg ggtccggggg gtggagggca agatcgccgc cgtcacctac
      901 gcccgggagc acaaggtgcc gttcctcggc ctctgcctcg ggctgcagtg cgcggtgatc
      961 gagttcgccc gcaacgtcgt cgggctggcc ggcgccaact cgtcggagtt cgaccacgcc
     1021 accccgcatc cggtgatcga tctcatggac gaccagcgcg aggtcgtcga caagggcggg
     1081 acgatgcggc tcggctccta cccggcggtg ctcggggccg acacgcttgt gcgcgacgcc
     1141 tacggcgccg aggtgatcta cgagcggcac cgccaccggt acgagttcaa cccccgctac
     1201 cgccgccgtc tggaagaggc cggcctccgc tgctcgggga cgtcccccga cgaccggctg
     1261 gtggagttcg tcgagctgtc aacggcggac cacccgttct tcgtggccac ccaggcccac
     1321 ccggagttca agagccggcc gaaccgtccg catccgctgt tccgggagct ggtcagggcg
     1381 gcgctggcgc gggccgagtc ccgcacgccc cggctgccgc tgccggagga cgcggagggt
     1441 gtcgcgctcg ccacaactta gaatcgggtc atgagcggat accgcctcgt cgactcccgg
     1501 gagatcgccc ggggcgggtt cctgacgttc gccgaggaaa cgttcgagtc cccggccggg
     1561 gagcggttcg tgcgctggat ggtggagcac cccggcgccg tcgccgccgt cccggtggag
     1621 ggcgggcccg gtgggccgca ggtcgtgctc gtgcggcagt ggcgcccggc gctgcgggat
     1681 ctgctgctgg agatcccggc cgggaagctc gacgtccccg gggaggcgcc cgacgacgcc
     1741 atggcccggg aactggccga ggagatccag caggtggccg gccggctcgt caagctggcg
     1801 accttctgga actcgccggg attctccacg gagctcaccc acgtctacat cgccctcgac
     1861 ctctccccct gcgaccgccc cgaggccgcc aaagaagagg agcaggacat gacgatcgag
     1921 cgggtgcccc tggccgacac cggccggctc atcgccgccg gccagatcac cgacgccaag
     1981 acgatcatcg ggctggcgct ggcggagcgg tatctggccg gtgagcagcc ggaggcggtg
     2041 gcctgacatg agcgccgaac ccacaccgct gcgcctcacc cgggtgcccg aggcgatccc
     2101 gcggccgctg gtggtcgggg tccccaagga gacgaaggtc aacgagtacc gggtggccgt
     2161 cacccccgac ggggtgtcgg agctcgtcca ccacggctcc acggtggtga tcgagaccgg
     2221 ggccggcgtc ggcgccgcca tcaccgacga ggagtacctc cgcgccggcg cccagatcgc
     2281 ct
//
LOCUS       DATGJT010000141         3441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_433580, whole genome shotgun sequence.
ACCESSION   DATGJT010000141 DATGJT010000000
VERSION     DATGJT010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433580"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..911
                     /locus_tag="VKX24_02435"
     CDS             120..911
                     /locus_tag="VKX24_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018089645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03084 family metal-binding protein"
                     /protein_id="HLJ07366.1"
                     /translation="MADIGALTADALAEHDDLRAILTGIPAAEWERQTPAAGWTVRDQ
                     ISHLAYFDGAARLSIADPDAFRASRAEAVADIEKFVDATLAYGRGISGAELLDRFTGE
                     RRRLVEAARAAPEGLRVPWYGPDMSVASSITARIMETWAHGQDVADALGRVRPPTARL
                     RHVCDIGIRARPFSYRNRGLEPPETPLRVELEAPDGTTWEWGPPDAADRVRGSALEFA
                     LVVTQRRLAPDSGLAVDGDDARTWIGFAQAFAGNPTDPDPARRGM"
     gene            1058..2164
                     /locus_tag="VKX24_02440"
     CDS             1058..2164
                     /locus_tag="VKX24_02440"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HLJ07367.1"
                     /translation="MVPTLALATLVTQAALVTPAAQADGTSTVERRVHRPHTLSADAT
                     AAATGLSPAQVKQAYGFPTGSTAGAGQKVAIVAPFDAPTIEADLGTFSQKFGLPACTT
                     ANGCFKKVNQTGGRTYPSADKLWAMEISMDVEWAHAIAPGAKLLLVEAKSDRLADVVV
                     AEDYATAHAGYVTNSLGVAEFAGQTAFDSHFSRSGVSIFVASGDDGATNGPGYPAAAP
                     GVIAVGATTLLNIGQPTFAEQGWHDSGGGCSLYEVASAAQKSYPGYGAVGCGGMRAVP
                     DVALVGDPRSGVSVYDSYRTTNSWFQAGGTSASTPMWAARAADSGLVITPNLLYGPTS
                     PIAFRDITVGNNGEPALPGYDLVTGLGSWTGATP"
     gene            complement(2270..3355)
                     /locus_tag="VKX24_02445"
     CDS             complement(2270..3355)
                     /locus_tag="VKX24_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011486520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HLJ07368.1"
                     /translation="MIDDGVWRTEAVERLGIRLPVVGAPMGGGPSTPALVAAVSEAGG
                     LGSLAVGYLSPDRLRSDIAAVREATAKPFAVNLFVPSPAEPTGEQIEAALAAVEPFRM
                     ELGLPARPTADGPWAEDFDAQLQAVVDARVPVVSFTFGLLPAAAVAALHDAGSLLVGT
                     ATTVEEAVAVEASGADLVCAQGAEAGAHRGTFLGRAEQALIGTLALVPQVCDAVGIPV
                     LAAGGIMDGRGVAAVLGLGAGAAQLGTAFLRAPEAGTSAPHRRALAAARETATAVSSD
                     ITGRAARGIENRLMRELRGVAVPPYPVMHTLTADLRRRATEQDVPDLMSLWCGQGAPM
                     CTELPAGDLVRRLADDAAATIARLSKL"
BASE COUNT          458 a         1362 c         1223 g          398 t
ORIGIN      
        1 caccatcggc gccggcggcg acgggacggt ggcggagatc ctggtcgaga tcggccgcac
       61 ggtcgacatc gaccaggtca tcgccgtcat caagggcgac gacgacgacg aggacgccgg
      121 tggctgacat cggcgcgctc accgccgacg cgctggccga gcacgacgac ctgcgggcga
      181 tcctgaccgg gattcccgcc gcggagtggg agcgccagac gccggccgcc ggctggaccg
      241 tgcgggacca gatctcccac ctggcgtact tcgacggcgc cgcccgcctc tcgatcgccg
      301 accccgacgc cttccgggcg agccgggcgg aggcggtggc cgacatcgag aagttcgtcg
      361 acgccaccct ggcctacggc cgggggatca gcggcgccga gctgctcgac cgcttcaccg
      421 gcgagcggcg ccggctcgtg gaagcggcgc gggccgcccc cgagggcctg cgggtcccgt
      481 ggtacgggcc cgacatgtcg gtggcgtcgt cgatcaccgc ccggatcatg gagacgtggg
      541 cccacggcca ggacgtggcc gacgccctgg gccgcgtccg gccgccgacc gcccggctcc
      601 ggcacgtctg cgacatcggg atccgggccc ggcccttcag ctaccgcaac cgcggcctcg
      661 agccgccgga aacgccgctg cgggtcgagc tcgaggcacc cgacggcacg acgtgggagt
      721 ggggcccgcc cgacgccgcc gaccgcgtcc ggggaagcgc cctggagttc gccctcgtcg
      781 tcacgcagcg gcgcctggcc cccgacagcg ggctcgctgt cgacggcgac gacgcccgca
      841 cgtggatcgg cttcgcccag gccttcgccg gcaacccgac cgaccccgac cccgcccggc
      901 ggggaatgta aaggccgtcc caaatcgacc tctgccgggg aggagcaccc cggccgaaag
      961 cgaaccaaag ggcgtgctgg ggaagcgcag ggccacaggc ggatccgtcc gccgcgccac
     1021 aggcggatcc gtccgccgcg gacttctcgc cggggtcgtg gtgccgaccc tggcgctggc
     1081 caccctcgtg acgcaggcgg cgctggtgac gccggccgcc caggccgacg gcacgagcac
     1141 ggtcgaacgg cgggtgcacc ggccgcacac gctctcggcc gacgccaccg cggcggcgac
     1201 ggggctcagc cccgcccagg tcaagcaggc ctacggcttc ccgaccggct cgaccgccgg
     1261 cgccggccag aaggtggcga tcgtggcgcc gttcgacgcc ccgacgatcg aggccgacct
     1321 cggcacgttc agccagaagt tcggcctgcc ggcctgcacc acggccaacg gctgcttcaa
     1381 gaaggtcaac cagaccggcg gcaggacgta cccgtccgcc gacaagctgt gggccatgga
     1441 gatctcgatg gacgtggagt gggcccacgc catcgccccc ggcgccaagc tcctcctcgt
     1501 cgaggccaag agcgaccggc tggccgacgt cgtcgtcgcc gaggactacg ccaccgccca
     1561 cgccggctac gtcaccaaca gcctcggcgt ggcggagttc gccggccaga cggcgttcga
     1621 ctcccacttc tcccgcagcg gcgtcagcat cttcgtggcc tccggcgacg acggggccac
     1681 caacggcccg ggctacccgg cggccgcccc cggcgtgatc gccgtcggcg ccaccaccct
     1741 gctcaacatc ggccagccga ccttcgccga gcagggctgg cacgactcgg gtggcgggtg
     1801 ctcgctctac gaagttgcga gcgcggccca gaagtcctat cccggctacg gcgccgtcgg
     1861 ctgcggcggg atgcgggccg tccccgacgt cgccctcgtg ggcgaccccc gcagcggggt
     1921 ctcggtctac gactcctaca ggaccaccaa cagctggttc caggccggcg gcacgagcgc
     1981 ctccacgccg atgtgggcgg cccgggccgc cgactccggc ctggtgatca cgccgaacct
     2041 gctctacggc ccgacgtcgc cgatcgcctt ccgcgacatc accgtcggca acaacggcga
     2101 gcccgcgctc ccgggctacg acctcgtcac cggcctcggc agctggacgg gcgccacgcc
     2161 gtgattctgg gcggctccgc cgcccccgcc cggcatccgc cgggctcctc cgaagcatgg
     2221 ggcccctgcc ccagccggcc gtcgctgttg aacgggcctc ccgtgcttgt cacagcttgc
     2281 tcaggcgggc gatggtggcc gcggcgtcgt cggccaggcg gcggacgagg tcgccggccg
     2341 ggagctccgt gcacatcggc gcgccctgcc cgcaccacag cgacatgagg tcgggcacgt
     2401 cctgctccgt cgcccggcgg cggaggtcgg cggtcagcgt gtgcatcacc gggtagggcg
     2461 ggacggcgac gccccgcagc tcccgcatca gccggttctc gatgccccgg gccgcccggc
     2521 cggtgatgtc ggagctgacc gccgtcgccg tttcgcgggc cgcggcgagc gcccggcggt
     2581 gcggggccga cgtccccgcc tcgggagcgc gcaggaaggc ggtgccgagc tgtgccgctc
     2641 cggcgccgag accgaggacg gcagccacgc cccggccgtc catgatcccg ccggcggcca
     2701 gcaccgggat ccccacggcg tcgcagacct gggggacgag ggccagcgtc ccgatcagcg
     2761 cctgctccgc ccggccgagg aacgtgcccc ggtgggcgcc ggcctcggcg ccctgggcgc
     2821 agacgagatc ggcgcccgac gcctccaccg ctaccgcctc ctcgaccgtg gtcgccgtgc
     2881 cgaccagcag cgagccggcg tcgtgaaggg cggcgaccgc cgccgccggc agcagcccga
     2941 aggtgaagct gacgaccggc acccgggcgt cgacgacggc ctggagctgg gcgtcgaagt
     3001 cctcggccca gggcccgtcc gccgtcgggc gggccgggag ccccagctcc atccggaagg
     3061 gctcgacggc ggccagcgcc gcttcgatct gctcgccggt cggttcggcc ggcgacggca
     3121 cgaacaggtt gacggcaaag ggtttcgccg ttgcctcccg cacggcggcg atgtcggatc
     3181 gcagccggtc gggcgacagg tacccgacgg ccagcgaccc cagcccgccg gcctcgctca
     3241 ccgccgccac cagcgccgga gtgctcggcc cgccgcccat cggcgccccc acgaccggca
     3301 gccggatccc gagccgctcg accgcttcgg tccgccagac gccgtcgtcg atcatctcgt
     3361 cctccccgtt tggccctgtc gtgtcgccct cgccgacagg ttgactccgc cgcccgggtc
     3421 cccgcgaatc gggacccgaa c
//
LOCUS       DATGJT010000142         2395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_745326, whole genome shotgun sequence.
ACCESSION   DATGJT010000142 DATGJT010000000
VERSION     DATGJT010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_745326"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..834)
                     /gene="ygiD"
                     /locus_tag="VKX24_02450"
     CDS             complement(<1..834)
                     /gene="ygiD"
                     /locus_tag="VKX24_02450"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013672460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HLJ07369.1"
                     /translation="MNDPMPAAFFGHGSPMNALDHNRYTDAWRAFGAAVFRPRAILVV
                     SAHWYINATAVTAMAKPRTIHDFYGFPDELFAVGYPAPGEPQLAEEIADLVKPTWVGL
                     DADSWGIDHGTWSVLVHAFPAADIPVLQLSVNATKPFDYHLELGAALAPLRDQGVLIV
                     ASGNAVHNLRAIDWSRPDAAFPWARTFDDGTADIMTRAPSELPEIQDRADFALAHPTP
                     DHFIPLLYLAGLASAAGQTTRVLVDGYAMGSISMACYTLGCHELASAVEGGAPVLPPV
                     PP"
     gene            948..1115
                     /locus_tag="VKX24_02455"
                     /pseudo
     CDS             948..1115
                     /locus_tag="VKX24_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013675256.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
     gene            complement(1165..2103)
                     /locus_tag="VKX24_02460"
     CDS             complement(1165..2103)
                     /locus_tag="VKX24_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HLJ07370.1"
                     /translation="MSRERLRRSELSTPGTSPKMMARAAESAADLVFLDLEDAVAPAE
                     KPGARRQVVDALTGLDWGDKTRACRINGTATPWCHDDLIEVVTGAGSCLDVVIVPKVK
                     APRDVWFVDDLLTQLEGKLGLAVGAIGIEVLIEETEALAGVEAIAASSPRLEALILGV
                     GDLSASQGIRARHIGAVGGGGRAASQPYPGDLWHYARNRMIVAARANGLDPIDGPYAD
                     FADDDGYRREAAWAATLGAVGKWCIHPNQIRSANEVFAPTPAEIDEARRVVAAVRAAE
                     DAGQGAARLGGVMVDAATARVFDGVLHRARLCGLLD"
     gene            complement(2100..>2395)
                     /locus_tag="VKX24_02465"
     CDS             complement(2100..>2395)
                     /locus_tag="VKX24_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009478620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HLJ07371.1"
                     /translation="GLVTASMVFGLASQDVAEQALAELGCSALRFRAPVHQGDTLYAC
                     TEVLEMTAAERPDAGVVRFQHWGVTHDERLVFEGQRLVLLKRRSHWAEEGRGR"
BASE COUNT          341 a          825 c          901 g          328 t
ORIGIN      
        1 cggcgggacc ggtggcagca ccggtgcgcc accctcgacg gcggacgcca gctcgtggca
       61 gccgagcgtg tagcaggcca tggagatcga tcccatggcg tagccgtcga cgaggacacg
      121 ggtcgtctgg ccggcggccg aggccaggcc ggccaggtag agcagcggga tgaaatggtc
      181 gggcgtggga tgggcgaggg cgaagtcggc gcggtcctga atctccggca actcgctggg
      241 cgctctggtc atgatgtcgg ccgtgccgtc gtcaaaggtc cgggcccacg ggaaggcggc
      301 gtccggccgg ctccaatcga tggcccgcag attgtggacg gcgttgccgc tggcgacgat
      361 caggaccccc tggtcccgca gcggtgcaag ggcggcgccc agctcgaggt ggtagtcgaa
      421 cggcttcgtt gcgttgacgg agagctgcag gacgggaatg tcggcggcgg ggaaggcgtg
      481 caccagcacg ctccaggtcc cgtggtcgat cccccagctg tcggcgtcga gaccgaccca
      541 ggtgggcttg acgaggtcgg cgatctcctc ggccagttgc ggttcacccg gcgccgggta
      601 gccgaccgcg aacagctcgt cggggaagcc gtagaagtcg tggatcgtcc tgggcttggc
      661 catggcggtg acggcggtgg cgttgatgta ccaatgggcg gagacgacca ggatcgcccg
      721 cgggcggaag acggcggcgc cgaaggcccg ccaggcgtcg gtgtagcggt tgtgatcgag
      781 ggcgttcatc gggctgccgt gcccgaagaa cgccgccggc atcggatcat tcatcggaaa
      841 tcccaggagc cgtgaggggc cgaccaagct cccattacat cacggtccgg agcgcgtcgt
      901 cgtgggcgta gggctggcgt tcggtgctca cgattacgca ccggtacgta cccggcgacg
      961 ggatccagcg gcacggcggc aacggttaca ccaccgagcg ccaggtggag cggcgctggc
     1021 gcgacgcccg gctcacgagg atcttcgagg gcacgggcca gatccagcag cggatcatct
     1081 ccagctgtct cctgccccgc agcccgctgt cctgatccgc ccggcgcggc gggacggggc
     1141 gaagcgaggc gaggcggcgc ggccctagtc gagcagcccg cagagccggg cccggtgcag
     1201 gacgccgtcg aagacccggg cggtggcggc gtcgaccatc acgccgccga gacgggcggc
     1261 cccctgaccg gcgtcctcgg cggcccgcac cgcggccacg acgcggcgcg cctcgtcgat
     1321 ctcggccggg gtgggggcga acacctcgtt ggccgagcgg atctggttcg ggtggatgca
     1381 ccacttcccc accgccccga gcgtcgccgc ccacgccgct tcccggcggt agccgtcgtc
     1441 gtcggcgaag tcggcgtagg gcccgtcgat gggatcgagc ccgttggccc gggcggccac
     1501 gatcatccgg ttgcgggcgt agtgccacag gtcgccggga tagggctgcg acgccgcccg
     1561 tccgccgccg ccgacggcgc cgatgtgacg cgcccggatg ccctggctgg ccgacaggtc
     1621 gcccaccccg aggatcagcg cctcgagccg gggcgagctg gcggcgatgg cctccacacc
     1681 ggccagcgcc tcggtctcct cgatcagcac ctcgataccg atggcgccga cggcgaggcc
     1741 gagcttgcct tccagctggg tcaggaggtc gtcgacgaac cagacgtccc ggggggcctt
     1801 gaccttgggg acgatgacga cgtcgaggca ggagccggcg ccggtcacca cctcgatgag
     1861 atcgtcgtgg caccagggcg tcgccgtgcc gttgatccgg caggcccggg tcttgtcgcc
     1921 ccagtcgagc ccggtcagcg catcgacgac ctggcgacgg gccccgggct tctccgccgg
     1981 ggccacggcg tcctcgaggt cgaggaagac gaggtcggcg gcggactccg ccgccctggc
     2041 catcatcttc gggctggtcc ccggcgtcga cagctccgag cggcgaagcc gttcccggct
     2101 catcgtcccc gtccctcctc cgcccagtgg gagcggcgct tgagcagcac gagccgctgg
     2161 ccttcgaaga ccagccgctc gtcgtgggtc actccccagt gctggaaccg gacgacgccg
     2221 gcgtcgggcc gctcggccgc tgtcatctcc aggacttcgg tgcaggcgta gagcgtgtcg
     2281 ccctggtgga cgggcgcccg gaaccgcagg gcgctgcagc cgagctcggc cagggcctgc
     2341 tcggcgacgt cctggctggc caggccgaac accatcgacg ccgtgacgag cccga
//
LOCUS       DATGJT010000143         2343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1367604, whole genome shotgun sequence.
ACCESSION   DATGJT010000143 DATGJT010000000
VERSION     DATGJT010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1367604"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..781)
                     /gene="cofE"
                     /locus_tag="VKX24_02470"
     CDS             complement(38..781)
                     /gene="cofE"
                     /locus_tag="VKX24_02470"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HLJ07372.1"
                     /translation="MSPPGPIEETPGTAVELVPLPGLPEIRPGVVLAPLLVEAAAAAG
                     RPLQPGDCLVVTQKVVSKAEGRLVPLDPSDLEARRRLVESESVRILRRRGDLIICETS
                     HGFVCANAGVDLSNVDDGWAALLPVDGDRSARRIRDGIRAACGVEVAVVVSDTFGRPW
                     RHGLVDVAIGVAGLAAVVDLRGTEDDRGRALQVTEVAVADEVAAAAELVMGKARGIPA
                     ALVRGLDAAWLRDSSVGELIRPTRDDLFR"
     gene            complement(778..1722)
                     /gene="cofD"
                     /locus_tag="VKX24_02475"
     CDS             complement(778..1722)
                     /gene="cofD"
                     /locus_tag="VKX24_02475"
                     /EC_number="2.7.8.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020576894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043743 - LPPG:FO 2-phospho-L-lactate
                     transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase"
                     /protein_id="HLJ07373.1"
                     /translation="MGTIAALAGGVGAARFLRGLVRAMPATDVVIIGNTGDDEVFHGL
                     HVSPDLDTVTYTLAGAVGATGWGLAGDTFRTLEAYGRYGEATWFRLGDADLATHLYRT
                     SRLREGATLTEVTAEITLAWEVKARLLPMSDDRVRTLIDVPAPDGGPPVTMRMQEWFV
                     RERAEPPVAGVRFDGAAAARPGPAVLDVLGEADAVLLCPSNPVISIGPILALPGVREA
                     LRARRGRVVGVSPIIRGATVKGPADRLMAAAGIEVSCAGVASIYADICGTLLVDDADA
                     DRVGDVERHGVRAAVAPILMGDVDGAERLARRVLELVA"
     gene            1820..>2343
                     /locus_tag="VKX24_02480"
     CDS             1820..>2343
                     /locus_tag="VKX24_02480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07374.1"
                     /translation="MSTADTSDAPEVPRVDELFNRALVAQLAEQRAQRETFAEVERKL
                     EALERLVTDRLGDLTRQLGADGQLEARIELLEETLGTRLTAIEKVVRGELDNRLGPLA
                     DRLGQVEQSLVSDETGAKLMALEATVRRRLTNLEEAVRSDDVPDRLGRLERALSEALN
                     GGEAGPILHDPALG"
BASE COUNT          311 a          886 c          878 g          268 t
ORIGIN      
        1 gggaaggtcc cacgaacctt ccccccgttt gtcgcgtcta gcggaagagg tcgtcccggg
       61 tcgggcggat gagctcgccg accgaggagt cccggagcca ggcggcgtcg aggccccgga
      121 ccagggcggc ggggatcccc cgggccttgc ccatgaccag ctcggcggcg gcggcgacct
      181 cgtcggccac cgccacctcc gtcacctgga gggcccggcc ccggtcgtcc tccgttcccc
      241 gcaggtccac gacggcggcc agcccggcca cgccgatggc cacgtcgacc aggccgtggc
      301 gccacggccg accgaacgtg tcggagacca ccaccgccac ctcgacgccg cacgccgccc
      361 ggatcccgtc ccggatgcgc cgggccgagc ggtcgccgtc caccgggagg agcgccgccc
      421 agccgtcgtc gacgttcgac aggtcgacgc cggcgttggc gcagacgaag ccgtggctgg
      481 tctcgcagat gatgaggtcg ccccgccggc gcaggatccg gaccgactcg ctctccacca
      541 gccggcgccg ggcctcgagg tccgacgggt cgagcggcac cagccgcccc tcggccttcg
      601 agacgacctt ctgggtgacg acgaggcagt ccccgggctg gagcggccgc ccggcggcgg
      661 cggccgcctc gacgagcagc ggcgccagca ccactccggg ccggatctcc gggagcccgg
      721 ggagcgggac gagttcgacc gccgtgccgg gcgtctcctc gatcgggccg ggcgggctca
      781 ggcgaccagc tccagcaccc ggcgggccag ccgctcggcg ccgtcgacgt cgcccatgag
      841 gatcggggcg acggcggcgc ggacgccgtg gcgctcgacg tcgcccaccc ggtcggcgtc
      901 ggcgtcgtcg accaggaggg tgccgcagat atcggcgtag atcgaggcca cgccggcgca
      961 ggacacctcg atcccggccg ccgccatcag ccggtcggcc gggcccttca cggtggcgcc
     1021 ccggatgatc gggctcacgc cgaccacccg gccccggcgg gcccgcagcg cctcccgcac
     1081 gccggggagc gccaggatcg ggccgatcga gatcaccggg ttcgacgggc acaggaggac
     1141 ggcgtcggcc tcgccgagga cgtcgagcac cgccggcccg gggcgggcgg ccgccgcccc
     1201 gtcgaagcgg acgccggcca ccggcggctc ggcccgctcc cgcacgaacc actcctgcat
     1261 gcgcatcgtg accggcggcc cgccgtcggg ggcggggacg tcgatcaggg tccgcacccg
     1321 gtcgtcggac atcggcagca gccgggcctt cacctcccag gccagggtga tctcggccgt
     1381 cacctcggtg agggtcgcgc cctcccggag ccggctcgtg cggtagagat gggtggccag
     1441 gtcggcgtcg ccgagacgga accaggtcgc ctcgccgtag cgcccgtagg cctcgagcgt
     1501 ccggaaggtg tcgccggcga ggccccagcc ggtcgcgccg acggccccgg ccagcgtgta
     1561 ggtgacggtg tcgaggtcgg gcgacacgtg gaggccgtgg aagacctcgt catcaccggt
     1621 gttgccgatg atgacgacgt cggtagccgg catggcccgg accaggcccc ggaggaagcg
     1681 ggctgccccg actccgccgg cgagggccgc gatcgtcccc atcgcctgac tgatagcgca
     1741 cccggcccgc cggtgtcgat tttcggtggc gtcgatccgc cttgcgagga agcctcggcg
     1801 ggcgcttaca ctccaaccga tgagcaccgc tgacacgtcg gacgcgccgg aggtgccccg
     1861 ggtcgacgag ctcttcaacc gggcgctcgt cgcccagctg gccgagcagc gggctcagcg
     1921 ggagacgttc gccgaggtcg agcggaagct ggaggcgctg gagcggctgg tgaccgaccg
     1981 cctcggcgat ctcacccgcc agctgggggc cgacggccag ttggaggcgc ggatcgagct
     2041 gctggaggag acgctcggca cccggctgac ggccatcgag aaggtcgtcc ggggcgagct
     2101 cgacaaccgg ctcggcccgc tggccgaccg cctcggccag gtcgagcagt cgctcgtctc
     2161 ggacgagacc ggggccaagc tcatggcgct cgaggccacc gtccggcgcc ggctgaccaa
     2221 tctcgaggag gcggtgcgct ccgacgacgt ccccgaccgg ctcggccggc tggagcgggc
     2281 gctgtccgag gcgctcaacg gcggcgaggc cggcccgatc ctccacgacc cggccctggg
     2341 att
//
LOCUS       DATGJT010000144         4273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_642269, whole genome shotgun sequence.
ACCESSION   DATGJT010000144 DATGJT010000000
VERSION     DATGJT010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4273
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_642269"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..700
                     /locus_tag="VKX24_02485"
     CDS             <1..700
                     /locus_tag="VKX24_02485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07375.1"
                     /translation="FDRYARRRMQGALLDDLRSRDWASRGVRAAARRIRSATDELTVS
                     LGRMPTAGEAGAAAGLSAGEVSRLNDDVHRATVLNYDSVFRDSEDCDALSTADADPGE
                     VILRRERRAYLRDAVSALPERLRTVVVGCFFDERPMLELARELGVTESRVSQMKAEAL
                     ALLREGLDATLEAEAEAVDAATAGAPPAEGRVARRKAAYFAAVAAASSYRDRLDSEPR
                     PLRRQAALDERITA"
     gene            847..2052
                     /locus_tag="VKX24_02490"
     CDS             847..2052
                     /locus_tag="VKX24_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019873652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HLJ07376.1"
                     /translation="MGLRINQNIAAMNAYRNLTVTDQQMQDSLEKLSSGFRINKAADD
                     AAGLSISEGLRSQIGGTHQAINNAQDGISVVQTADGALGEVHSILQRMKDLAVQASNS
                     GSQDTTARTAAQTEFNQLKDEIDRIGNTTSFGNTKLLNGSFGNQAGAVNGSGIGALTV
                     VSGTNDTFKVSTEGVAAQSLTLAAGSYTNDAAGAASLQSALQTSIDGNASVKGLVTAT
                     VYHDSTINKNVVSFTRNSSDANTSVTLAAGAANDVLAGLGVTAGTGNVTAGTGGVFQV
                     GANNTAADRINVSISAVNSTTLTGIGSVDLVNNATSAIDVIDNAITSVSTTRANLGAY
                     QNRFSHTISNLSVTSENLSASESRIRDTDMASEMVSFTRAQILTQAGTAMLAQANQAP
                     QQVLQLLRG"
     gene            2127..2405
                     /locus_tag="VKX24_02495"
     CDS             2127..2405
                     /locus_tag="VKX24_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07377.1"
                     /translation="MDPLSPLSLFGPVRAVPPVAAGGARSGVSASPWRAPELPQRRVG
                     VQFDHRSDGVEMMTAIDMRTGVVISQTPAPQVLAVVDSIMAAIRQREV"
     gene            2407..>4273
                     /gene="fliD"
                     /locus_tag="VKX24_02500"
     CDS             2407..>4273
                     /gene="fliD"
                     /locus_tag="VKX24_02500"
                     /inference="COORDINATES: protein motif:HMM:NF018852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HLJ07378.1"
                     /translation="MASSPTSSVSGLVSGLDTNSIIQQLMSIEQQPQNALKDKKNSDT
                     TTLAAYQQLNTLFSNISAAADGLTSVTDWKAMAATSSSASVTASATSAASAGALSFTV
                     EQLSRAGSTASTGTVSSTSQIVASGPVLVSKGVDVLGFSNLAAGAGLTTGTHTFEVTQ
                     ATAGATQTATAALSGSATFAAPVTLDVTVNGTAKEYTIAAGTYTNAQLATAVQNASGG
                     DLTAAVGSDGRLALTTTHEGSTASLAVTGGTAASALGLDITAAATSGTDGAVSVDGGA
                     PVAVTSAGPGVTQSLTGPDGTVQATMSGGLRVGSASLYDVDPGNGSLAALAGAISVAG
                     AGSLSAAAVNVGNGAYRLQLSSTTTGADSNISIDTTNLTGAMASFATVQSGRNAVIQI
                     GEGPGAYQVSSSSDSVTGVLPGVTLQLHQADPDTAVTVSVAADGTTLATNVGNLIDAA
                     NQAVSFINQQSTYDPTTKQAGLLLSSGMARTLEDQVYSAVLNAVSGTKLGSPGAVGVS
                     VAKDGTIAFDKSAFLTAFSTDPNAVASLFRAGGTATNGQVGFLAASDNTQPGTYAVNV
                     TQAATQAEADGTALSGPGIAAAEQIDVRVGGASGTTASYAAAAGASLDTIANGLNA"
BASE COUNT          684 a         1634 c         1419 g          536 t
ORIGIN      
        1 gttcgaccgc tacgcccgcc ggcggatgca gggagcgctg ctcgacgacc tccgcagccg
       61 ggactgggcc agccgggggg tgcgggccgc cgcccgcagg atccgctccg ccaccgacga
      121 gctcaccgtg tcgctcggcc ggatgccgac ggccggcgag gccggcgccg ccgccgggct
      181 gtcggccggc gaggtgagcc ggctgaacga cgacgtccac cgggccaccg tcctcaacta
      241 cgactcggtg ttccgcgact ccgaggactg cgatgccctc tcgaccgcag acgccgatcc
      301 cggcgaggtc atcctccgcc gggagcgccg ggcctacctc cgggacgccg tctcggcgct
      361 gcccgagcgg ctccgcacgg tcgtcgtcgg ctgcttcttc gacgagcggc cgatgctgga
      421 gctggcccgg gagctcggcg tgaccgagtc gcgggtctcg cagatgaagg ccgaggcgct
      481 ggccctcctg cgggagggac tcgacgccac gctcgaggcg gaggccgagg ccgtggacgc
      541 cgcgacggcg ggggcaccgc cggcggaggg ccgcgtcgcc cgccgcaagg ccgcctactt
      601 cgccgccgtg gccgccgcct cgtcgtaccg ggaccggctc gactccgagc cgcgtccgct
      661 gcgccgccag gccgcgctcg acgagcgcat cacggcctga cgctcccgag ttttcttcgg
      721 gaaatccggc ccgtccgccc tcagatccgc cgtcctccga ccgatcggaa ggggcggacc
      781 gcaacagggc ggcccgaggg gccaccacgg atgaagggcc cctgacccag tcaaggagga
      841 gaaaccatgg gtctccgcat caaccagaac atcgcggcga tgaacgccta ccggaacctc
      901 acggttacgg accagcagat gcaggacagc ctcgagaagc tgtcgtcggg cttccgcatc
      961 aacaaggccg ccgacgacgc cgccggcctg tccatcagcg agggcctccg gtcccagatc
     1021 ggcggcacgc accaggccat caacaacgcc caggacggca tctccgtcgt ccagacggcg
     1081 gacggtgccc tgggtgaggt gcactcgatc ctgcagcgca tgaaggacct ggccgtccag
     1141 gcctccaact ccggctcgca ggacacgacc gcccggacgg cggcccagac cgagttcaac
     1201 cagctgaagg acgagatcga ccggatcggc aacaccacca gcttcggcaa cacgaagctg
     1261 ctcaacgggt cgttcggcaa ccaggcgggg gccgtgaacg gttccggcat cggtgccctc
     1321 actgtcgtct ccggcaccaa cgacacgttc aaggtctcca ccgagggcgt ggccgcccag
     1381 tcgctgacgc tcgccgccgg cagctacacc aatgacgccg ccggggccgc cagcctgcag
     1441 tcggccctcc agacgtcgat cgacggcaac gccagcgtca agggcctggt gaccgccacg
     1501 gtctaccacg actcgacgat caacaagaac gtggtcagct tcacccggaa ctcgtccgac
     1561 gccaacacct cggtgacgct ggccgccggc gcagccaacg acgtcctcgc cggcctcggc
     1621 gtgacggccg gcacgggcaa cgtcaccgcc ggcaccggcg gcgtgttcca ggtgggggcc
     1681 aacaacacgg ccgccgaccg gatcaacgtc agcatctcgg cggtcaactc gacgaccctg
     1741 accggtatcg gcagcgtcga cctcgtcaac aacgccacgt cggccatcga cgtcatcgac
     1801 aacgccatca cgtcggtctc gaccacccgg gccaacctcg gtgcctacca gaaccggttc
     1861 agccacacga tctcgaacct gtcggtgacc tccgagaacc tctccgcttc ggagagccgg
     1921 atccgggaca ccgacatggc gtcggagatg gtgagcttca cccgggccca gatcctgacc
     1981 caggccggca ccgccatgct ggcccaggcc aaccaggcgc cgcagcaggt gctgcagctc
     2041 ctgcggggct agggaccgta acggcatgga cggggacggt tccctgagcg ggaccgtccc
     2101 cgtccgcgtc cagcactgaa acggccatgg accccctttc gcctctctcg ctcttcggcc
     2161 cggtgcgggc ggttccaccg gtggcggccg gcggcgcccg ttccggcgtt tcggcttcac
     2221 cgtggcgcgc cccggaatta ccgcagcgcc gggtcggcgt gcagttcgac caccggtcgg
     2281 acggggtcga aatgatgacc gccatcgaca tgcggacggg cgtggtgatc tcccagacgc
     2341 cggccccgca ggtcctggcg gtggtggaca gcatcatggc cgccatccgg caacgggagg
     2401 tctgacgtgg cgtcgtcgcc caccagcagt gtctcaggcc tggtcagcgg gctcgacacc
     2461 aactcgatca tccagcagct gatgtcgatc gagcagcagc cccagaacgc cctgaaggac
     2521 aagaagaaca gcgacaccac cacgctggcc gcgtaccagc agctcaacac gctgttctcc
     2581 aacatctcgg ccgccgccga cggactgacc agcgtgaccg actggaaggc gatggcggcg
     2641 acgtcgtcct cggccagcgt gacggcgtcg gcgacgtcgg cggccagcgc cggggcgctg
     2701 tccttcaccg tcgagcagct gtcccgggcc ggttcgaccg cctccacggg gacggtgtcc
     2761 tcgacgtcgc agatcgtggc ctccggcccg gtgctggtgt cgaagggcgt cgacgtcctc
     2821 gggttctcca acctcgccgc gggggccggg ctcaccaccg gcacgcacac cttcgaggtc
     2881 acccaggcca cggccggcgc cacccagacc gccacggcgg cgctgtcggg gtcggcaacg
     2941 ttcgccgctc ccgtcaccct cgacgtcacg gtgaacggaa cggcgaagga gtacacgatc
     3001 gccgccggga cctacaccaa cgcccagctg gccaccgccg tccagaacgc ctccggcggg
     3061 gacctcacgg ccgccgtggg cagcgacggc cggctcgctc tgaccacgac ccacgagggg
     3121 agcacggcgt cgctggccgt gaccggcggc acggcggcct cggcgctcgg cctcgacatc
     3181 accgccgccg ccaccagcgg gaccgacggc gcggtgtcgg tggacggcgg cgcccccgtc
     3241 gccgtgacca gcgccgggcc cggggtgacg caatccctca ccggccccga cggaacggtg
     3301 caggccacga tgtccggggg cctgcgcgtc ggctcggcca gcctctacga cgtcgatcca
     3361 ggcaacggca gcctggccgc cctggccggc gccatcagcg tggccggcgc cggcagcctg
     3421 tcggccgcgg cggtgaacgt cggcaacggt gcctaccggc tgcagctgtc gtcgaccacc
     3481 accggcgccg actccaacat ctcgatcgac accacgaatc tcaccggggc gatggcgtcc
     3541 ttcgccacgg tgcagtcggg ccgcaacgcc gtcatccaga tcggcgaagg gcccggcgcc
     3601 taccaggtca gctcgtcgag cgactccgtg accggcgtgc ttcccggtgt gacgctgcag
     3661 ctccaccagg ccgacccgga caccgcggtg acggtgagcg tggccgccga cggcaccacg
     3721 ctggccacca acgtcgggaa cctgatcgac gccgccaacc aggccgtgtc gttcatcaac
     3781 cagcagtcga cgtacgaccc gacgaccaag caggcggggc tgctgctctc ctccgggatg
     3841 gcccgcaccc tcgaggacca ggtgtactcg gcggtcctca acgccgtgtc cggcaccaag
     3901 ctcggcagcc cgggagcggt cggcgtctcc gtcgccaagg acggcacgat cgccttcgac
     3961 aagtcggcgt tcctcaccgc cttctccacc gaccccaacg ccgtcgccag cctgttccgg
     4021 gccgggggga cggcgaccaa cggccaggtc ggcttcctgg cggcttcgga caacacccag
     4081 cccggcacgt acgccgtcaa cgtcacccag gccgccaccc aggcggaggc cgacgggacg
     4141 gcgctgtcgg gtccgggcat cgccgccgcc gagcagatcg acgtgcgggt cggcggggcg
     4201 agcggtacca ccgcctccta cgccgctgcc gccggcgcct ccctcgacac catcgccaac
     4261 ggactcaacg ccg
//
LOCUS       DATGJT010000145         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_434093, whole genome shotgun sequence.
ACCESSION   DATGJT010000145 DATGJT010000000
VERSION     DATGJT010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434093"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..790
                     /locus_tag="VKX24_02505"
     CDS             <1..790
                     /locus_tag="VKX24_02505"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HLJ07379.1"
                     /translation="AAAAGRLGLSCVAVCYGSPPLAGTEPLGLRLTRRLGADVVFTGS
                     GERVSVDTRLEEVAAKLSTDGRVPYVIPRGGASAVGAVGYAVAAAELAGQLAAAGVAR
                     ATVLLATGSCGTQAGLVAGAGLPSSFRAGATVAVQVLGVPVSRPPDEVVEHVARLATG
                     CAARLGSDRVFTGDDVSLLGGYIGPGYGKPSSEGDEAAELALRTEALILDPVFTAKAM
                     AALVAEARAGRLPGPVVFLHTGGTPAALAALAAPAAPAAPAVLP"
     gene            897..>2345
                     /locus_tag="VKX24_02510"
     CDS             897..>2345
                     /locus_tag="VKX24_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HLJ07380.1"
                     /translation="MTGDEPEFLGLGGRLEAAAGEELVAAGFALEMADAELLHDGFGL
                     ADLAHVLALADAGVLPEADARVLLEALLEMAAVPAGEFPYDAAYGDPWNSRERYLEAR
                     AGARAGWLTVGRPRREAARVAFRIAVRRAVLDAHAAGVALAEAYLAQARRHRATMMAD
                     FTYLQPAQPTTLGYVLAGHLQPVLRHLVRLEQAYGWVNRSPAAAGGTTGSGLPLDRER
                     LAARLGFARVIPHARDAMWQSDGLVDLLATLAALATEAGQVAADLEIWASPGFGFVAL
                     ADEYCRVSALMPQKKNPYALAVVRHAGGTTAGALSGLLSVLRTGTGRTDHFLSAAGDV
                     DRALRTAAGATRLLAGVVSTLRVDRGALARSAADPGLVLADVADRIVAAGVADRRTVH
                     RLLGRAARRAAEGRHPLTGDDVATALGEGGLAVPDGVAALLADPTAVLADRTVTGGWS
                     RLPELLTASGRELARRRRAAAALRAAAEAAEVA"
BASE COUNT          221 a          952 c          893 g          279 t
ORIGIN      
        1 ggcggcggcg gccggccggc tggggctgag ctgcgtggcc gtctgctacg ggtcgccgcc
       61 actggccggg acggaaccgc tcgggctccg gctcacccgc cgcctcggcg ccgacgtcgt
      121 gttcaccggc tcgggggaac gggtctcggt cgacacccgg ctggaagagg tggcggccaa
      181 gctttcgacc gacgggcgtg ttccctacgt catcccccgg ggcggggcca gcgccgtcgg
      241 cgccgtcggg tacgcggtgg cggcggccga gctggccggc cagctggcgg ccgccggggt
      301 cgcccgggcg acggtgctgc tggccaccgg ctcctgtggc acccaggccg gcctggtggc
      361 cggcgccggg ctgccctcca gtttccgggc aggagcgacc gtcgcagtgc aggttctcgg
      421 cgtgccggtc agccggccgc cggacgaggt cgtcgagcac gtggcccggc tggcgacggg
      481 ttgcgccgcc cggctcggtt ccgaccgggt gttcaccggc gacgacgtca gcctgctggg
      541 cggctacatc ggccccgggt acgggaaacc gtcctccgag ggcgacgagg cggcagagct
      601 ggccctgcgg acggaggccc tgatcctcga ccccgtcttc accgccaagg ccatggcggc
      661 cctcgtggcc gaggcccggg ccgggcgcct ccccggcccc gtcgtgttcc tccacaccgg
      721 cggcaccccc gccgccctgg ccgccctggc cgcgccggcc gcgccggccg cgccggccgt
      781 cctgccgtga cgcccgtccc cccggccctc cggatctcgg caggatttcc cgcggaaagc
      841 gcggagaatc ctgccgagat ccggggcggg accctgggcc tccggagcga gcggccgtga
      901 ccggcgacga gccggagttc ctcgggctgg gcgggcggct ggaggcggcg gcgggcgagg
      961 agctcgtggc ggcgggcttc gccctggaga tggcggacgc cgagctcctc cacgacgggt
     1021 tcgggctggc cgacctggcc cacgtgctcg ccctggccga cgccggcgtc ctgcccgaag
     1081 ccgacgcccg cgtcctcctc gaggccctcc tggagatggc cgccgtcccc gccggcgagt
     1141 tcccctacga cgccgcctac ggcgacccct ggaactcccg ggagcgctat ctcgaggccc
     1201 gggccggcgc ccgggccggg tggctgaccg tcgggcggcc ccggcgggag gcggcccggg
     1261 tggccttccg gatcgccgtc cgccgggccg tgctcgacgc ccacgccgcc ggcgtcgccc
     1321 tcgccgaggc ctacctggcc caggcccggc gccaccgggc cacgatgatg gccgacttca
     1381 cctacctcca gccggcccag cccacgaccc tggggtacgt gctggccggg cacctccagc
     1441 ccgtcctccg ccacctggtc cggctggagc aggcctacgg ctgggtgaac cgcagcccgg
     1501 ccgccgccgg cggcaccacc ggcagcgggc tgccgctcga ccgggagcgc ctcgccgccc
     1561 gtctcggctt cgcccgggtc atcccccacg cccgcgacgc catgtggcag tccgacggcc
     1621 tcgtcgatct cctggccacg ctggccgcac tggccaccga ggccggccag gtcgccgccg
     1681 acctcgagat ctgggcctcg ccgggcttcg gcttcgtggc cctggccgac gagtactgcc
     1741 gggtcagcgc cctcatgccc cagaagaaga atccctacgc cctggccgtg gtccgccacg
     1801 ccgggggcac cacggcgggg gcgctctccg ggctgctttc tgtgctccgg acgggcaccg
     1861 gccgcaccga ccacttcctc tccgccgccg gcgacgtcga tcgggcgctg cggacggcgg
     1921 ccggggccac ccggctcctg gccggcgtcg tctcgacgct gcgggtcgac cggggggcgc
     1981 tggcccgcag cgccgccgat cccggcctgg tgctggccga cgtcgccgac cggatcgtgg
     2041 ccgccggcgt cgccgaccgc cggaccgtcc accggctgct cggccgggcc gcccgccggg
     2101 ccgccgaggg ccggcacccg ctcaccggcg acgacgtggc caccgccctg ggcgagggag
     2161 ggctcgccgt gccggacggg gtggcggcgc tgctggccga ccccacggcg gtgctcgccg
     2221 accggacggt caccggcggc tggagccgcc tgcccgagct gctcaccgcc tcggggcgcg
     2281 agctggcccg ccggcggcgg gcggccgccg ccctgcgggc cgccgccgag gccgccgagg
     2341 tggcg
//
LOCUS       DATGJT010000146         4836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_331752, whole genome shotgun sequence.
ACCESSION   DATGJT010000146 DATGJT010000000
VERSION     DATGJT010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4836
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331752"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..2758
                     /gene="acnA"
                     /locus_tag="VKX24_02515"
     CDS             131..2758
                     /gene="acnA"
                     /locus_tag="VKX24_02515"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HLJ07381.1"
                     /translation="MSPELDSIETPSGPVAIHRLDRVAAAAGTDLARLPHTVKILLEN
                     LLRREGSRDVSAADVAALAAWPAASPGARVAFVPARVLMQDFTGVPAVVDLSALRAAV
                     ARAGGDPEQVNPRVPVDLIIDHSVQVDEFGTEVAYRHNIDFEYRRNAERYALLRWAQQ
                     AFRQFQVVPPGMGICHQVNLEHLGQVVMVRDGVAFCDTLLGTDSHTTMINGLGILGWG
                     VGGIEAEAAMLGQPLFLPWPKVVGVRTLGALPQGTTATDLVLTLTELLRAKGVVGSFV
                     EFFGSGLSSLRIEDRATLSNMCPEYGATSALFPADRRSLHYLRETGRAHLWGLVETYC
                     KAQGLFRTDDDPDPVFSDVVDLDLSAVVPSLAGPRRPQDRRSLAQVWPSFEEAFGDRL
                     ATRAADPEQLSNGSVVIASITSCTNTSNPSVMVAAGLLAKKAVEAGLAPKPWVKTSMA
                     PGSRVVTDYLDASGLMPYLDKLGFNLVGYGCTTCIGNSGPLPEEVAGAVTDQDLAVVA
                     VLSGNRNFEGRIHPQVRASYLASPPLVVAYSLAGTIDLDLGTDPLGTTPDGRAVHLAD
                     LWPTREEVAGALSGAISAQQFDDEYGRIFDGDAHWAGLPAPTGELFDWDPESTYVREP
                     PYFFGLTTEVEAPGDITGARVLVSLGDSVTTDHISPAGSIKLDSPAGRYLTEHGVGPA
                     DFNSYGSRRGNHEVMLRGTFANVRLRNKLAPDTEGPWTRHLPDGERMTIFDASLAYRA
                     EQVPLIVLAGKEYGSGSSRDWAAKGTALLGVRAVIAESYERIHRSNLVGMGILPLQFL
                     PGESAASLGLTGEESYSIAGIAGGLTPGQRISVGVTGAGGSSSSFEAVVRIDGAAEAD
                     YYRNGGILPTVLRQMLDGS"
     gene            2755..3669
                     /locus_tag="VKX24_02520"
     CDS             2755..3669
                     /locus_tag="VKX24_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014741160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HLJ07382.1"
                     /translation="MTAPSGQQHRIRHGDQQATVVEVGGSIREYTAGGVPVLDPYAES
                     AMCDGAHGTPLIPWPNRLADGRYSFGGADYQVALTEPGKANAIHGFLRWQPFVATRHD
                     EDRVVMAASVFPQSGYPFRLDVSVSYELGEGGLVVTTTATNGGDATLPYGVGQHPYLS
                     AGGGLLDACELSFQAATRIVTDEHRQLPTGTAPVAGTEYDFGARRPIGDLQCDFAFTD
                     LARDESGRAWVRLWRPDGTVAELWIDEDYPYLEIFTGDTLAPDRRRRGLGCEPMSCPP
                     NAFQTGQQVIRLEPGASVSHRWGARLGR"
     gene            complement(3635..4741)
                     /locus_tag="VKX24_02525"
     CDS             complement(3635..4741)
                     /locus_tag="VKX24_02525"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004922498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HLJ07383.1"
                     /translation="MNLPVMPPVKPMLAKLVPEIPKEPAGTTYEPKFDGFRAIVFRDS
                     DEVELGSRNERPLTRYFPDVVEAVTRELPERCVVDGEIVLPLGGRLEFEALQARLHPA
                     ASRVKLLASQTPAALVVFDLLALGDRSLVGEPFRTRRAILAEALAAARPPVFLAPSTG
                     SVEVARDWFHRFEGAGLDGIVAKPPDIRYVQDRRVMFKIKHERTADCVVAGFRWYKSG
                     DGVGSLMLGLHDEDGDLWPIGVAASFAAPERKRLVDKLEPYRLHQGDPHPWAPDGDYQ
                     RLVVEPNRWSHGKDQSWEPLRPELVVEVAYDYMEGHRFRHVAHLRRWRPDRTPESCRF
                     DQLERPPAVDLADVFSGSTGLDGVSAPAGPPSGG"
BASE COUNT          652 a         1757 c         1744 g          683 t
ORIGIN      
        1 ccgcgtgctc gtcgttcagc ccctgcgtgc ggtcgagctc ggccaggacc tgctccgcct
       61 gccgcattag cgcctcgtcg ccgtccacac ccgagattct acggcccggg gcccaagcca
      121 taatggggct atgagccctg aactggacag catcgagacc ccgtccggac cggttgcgat
      181 ccaccggctc gaccgggtcg cggccgccgc cggcaccgac ctggcccggc tgccgcacac
      241 cgtcaagatc ctcctcgaga acctgctgcg ccgggagggc agccgggacg tgtccgcggc
      301 cgacgtcgcc gccctcgccg cctggccggc cgcgtcgccc ggcgcccggg ttgccttcgt
      361 gcccgcccgg gtgctgatgc aggacttcac cggggtgccc gccgtcgtcg acctgtcggc
      421 gctgcgggcg gcggtcgccc gggccggcgg cgacccggag caggtcaacc cgcgggtgcc
      481 ggtcgacctg atcatcgacc actcggtgca ggtcgacgag ttcggcaccg aggtcgccta
      541 ccgccacaac atcgacttcg agtaccggcg caacgccgag cgctacgccc tcctgcgctg
      601 ggcgcagcag gcgttccggc agttccaggt cgtgccgccg ggcatgggga tctgccacca
      661 ggtcaacctc gagcacctcg gccaggtggt gatggtccgt gacggcgtcg ccttctgcga
      721 cacgctgctc ggcaccgact cgcacacgac gatgatcaac gggctgggca tcctcggctg
      781 gggggtcggc gggatcgagg ccgaggcggc gatgctcggc cagccgctgt tcctgccctg
      841 gccgaaggtc gtcggggtgc gcacgctcgg ggcgctgccc caggggacga ccgccaccga
      901 cctggtgctg accctgaccg agctgctgcg ggccaagggg gtcgtcggca gcttcgtcga
      961 gttcttcggc tcgggcctgt ccagcctgcg catcgaggac cgggcgacac tctccaacat
     1021 gtgcccggag tacggggcga cctcggcgct gttccccgcc gaccgccgct cgctgcacta
     1081 cctgcgggag accgggcggg cgcacctgtg gggcctggtc gagacctact gcaaggccca
     1141 gggcctgttc cggaccgacg atgaccccga cccggtgttc agcgacgtcg tcgacctcga
     1201 cctctccgcc gtcgtgccga gcctggccgg gccgcggcgg ccgcaggacc gccggtcgct
     1261 cgcccaggtg tggccgtcat tcgaagaagc cttcggcgac cggctggcca cccgcgccgc
     1321 cgacccggag cagctctcga acggctcggt ggtcattgct tcgatcacca gctgcaccaa
     1381 cacctccaac ccgtcggtga tggtcgccgc cggcctgctg gccaagaagg cggtcgaggc
     1441 cggactggcg ccgaagccgt gggtgaagac cagcatggcc ccggggtcgc gggtggtcac
     1501 cgactacctc gacgcctccg ggctgatgcc ctacctggac aagctcgggt tcaacctggt
     1561 cggctacggc tgcacgactt gcatcggcaa ctccggaccg ctgcccgagg aggtggccgg
     1621 cgccgtcaca gaccaggatc tggccgtggt cgccgtgctg agcggcaacc gcaacttcga
     1681 gggccggatc cacccgcagg tgcgggcgag ctacctggcg tcgccgccgc tggtcgtcgc
     1741 ctactcgctg gccggcacga tcgacctcga tctcggcacc gacccgctgg gaacgacccc
     1801 ggacgggcgt gcggtacacc tggccgacct gtggccgacc cgggaggagg tcgccggggc
     1861 gctgtccggc gccatctccg cccagcagtt cgacgacgag tacggccgga tcttcgatgg
     1921 cgacgcccac tgggccggcc tcccggctcc gaccggcgag ctgttcgact gggacccgga
     1981 gtcgacctac gtgcgggaac cgccgtactt cttcgggttg acgaccgagg tggaggctcc
     2041 cggcgacatc accggggcac gggtgctggt gtcgctgggc gactcggtga ccaccgacca
     2101 catctccccc gccgggtcga tcaagctcga ttcgccggcg ggccgctacc tgaccgagca
     2161 cggcgtcggc ccggcggact tcaacagtta cggatcccgt cggggcaacc acgaggtgat
     2221 gctgcggggc accttcgcca acgtgcggct gcgcaacaag ctggcgccgg acaccgaggg
     2281 gccgtggacc cggcacctcc cggacgggga gcggatgacg atcttcgacg cctcgctcgc
     2341 ctaccgggcc gagcaggtgc cgttgatcgt gctcgccggc aaggagtacg gctcgggcag
     2401 ctcccgggac tgggcggcca agggcaccgc gctgctcggg gtgcgggcgg tgatcgccga
     2461 gagctacgag cgcatccacc gctccaacct ggtcggcatg ggcatcctgc cgctgcagtt
     2521 cctgcccggc gagtcggccg ccagcctggg gctgaccggg gaggagtcgt actcgatcgc
     2581 cgggatcgcc ggcgggctga cgccggggca gcggatctcg gtcggcgtga ccggggcggg
     2641 cggatcctcg tcgtcgttcg aggcggtcgt gcgcatcgac ggcgccgccg aggctgacta
     2701 ctaccgcaat ggcgggatcc tccccacggt gctccgccag atgctcgacg ggtcgtgacg
     2761 gctccctctg gccagcagca ccgcatccga cacggcgacc agcaggccac cgtggtcgag
     2821 gtcggcggca gcatccgcga gtacacggcc ggcggggtgc cggtgctcga cccgtacgcc
     2881 gagtccgcca tgtgcgacgg cgcccacggg acgccgctga tcccgtggcc gaaccggctg
     2941 gccgacgggc ggtactcgtt cgggggggcc gactaccagg tcgccctgac cgagccgggg
     3001 aaggccaatg cgatccacgg gttcctgcgc tggcagccgt ttgtggcgac ccgccacgac
     3061 gaggaccggg tcgtgatggc ggcctcggtg ttcccgcaga gcgggtaccc attccgcctc
     3121 gacgtttccg tcagctacga gctgggcgag gggggcctgg tggtgacgac caccgcgacc
     3181 aacggcggcg acgccaccct cccgtacggg gtcggacagc acccgtacct gtcggccggg
     3241 ggcggcctgc tcgacgcctg cgagctgtcc ttccaggcgg cgacccgcat cgtcaccgac
     3301 gagcaccgcc agctgccgac ggggaccgcg ccggtcgccg ggacggagta cgacttcgga
     3361 gcccggcggc ccatcggcga cctgcagtgc gacttcgcct tcaccgatct ggcgcgggac
     3421 gagtcgggcc gggcctgggt gcggctgtgg cggccggacg gcaccgtcgc cgagctgtgg
     3481 atcgacgagg actaccccta cctggagatc ttcactggcg acaccctggc ccccgaccgg
     3541 cgccggcggg ggttgggttg cgagccgatg tcctgcccgc ctaatgcctt ccagaccggg
     3601 cagcaggtga tccggctcga gccgggagcg tcagtcagcc accgctgggg ggcccggctg
     3661 gggcgctgac cccgtcgagc cccgtcgatc cgctgaacac gtcggccagg tcgacggcgg
     3721 gcggccgctc cagctggtcg aagcggcacg actccggggt ccggtccggc cgccaccggc
     3781 ggaggtgggc gacgtgccga aaccggtggc cctccatgta gtcgtaggcg acctcgacca
     3841 ccagctcggg ccggagcggc tcccaggact ggtccttgcc gtggctccag cggttcggct
     3901 cgacgaccag gcgctggtag tcgccatccg gcgcccacgg gtgcgggtcg ccctggtgca
     3961 ggcggtacgg ttccagcttg tcgacgaggc gcttgcgctc cggggcggcg aaggaggcgg
     4021 cgacgccgat cggccacagg tcgccgtcct cgtcgtggag gccgagcatc agcgagccca
     4081 ccccgtcgcc cgacttgtac cagcggaacc cggcgacgac gcagtcggcg gtgcgctcgt
     4141 gcttgatctt gaacatcacc cggcggtcct ggacgtagcg gatgtccggc ggcttggcaa
     4201 cgatgccgtc gagccccgcc ccctcgaagc ggtggaacca gtcccgggcg acctcgaccg
     4261 atccggtcga cggggccagg aacaccggcg gtcgggccgc ggccagggct tcggccagga
     4321 tcgcccggcg ggtgcggaac ggctcgccga ccagggagcg gtccccgagg gccagcaggt
     4381 cgaacaccac cagcgctgcc ggcgtctggc tggcgagcag cttgacccgg gaggcggccg
     4441 ggtggagcct ggcctgcagc gcctcgaact cgagccgccc accgaggggc aggacgatct
     4501 cgccgtcgac gacgcagcgc tcgggcagct cccgcgtcac ggcctcgacg acgtcgggga
     4561 agtagcgggt cagcggccgc tcgttgcggc tgccgagctc gacctcgtcg ctgtcacgga
     4621 agacgatcgc ccggaagccg tcgaactttg gctcgtaggt tgtccccgcg ggctccttcg
     4681 ggatctccgg gacgagcttg gccagcatcg gcttgaccgg gggcatcacg ggtaggttca
     4741 ccgccaccca tcattgcagc gccggctcgt ggcggacggc cgggggatca gccggtcgtc
     4801 gtccctccgg ctccgccgcc cccgccgcct ccgccg
//
LOCUS       DATGJT010000147         3781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_539401, whole genome shotgun sequence.
ACCESSION   DATGJT010000147 DATGJT010000000
VERSION     DATGJT010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539401"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VKX24_02530"
     CDS             complement(<1..183)
                     /locus_tag="VKX24_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding protein"
                     /protein_id="HLJ07384.1"
                     /translation="MTEDPSAPTLTAEQLSVLERFGRRRRVDAGEILYAEGDATYDFY
                     VMLSGVVEITGAYDGED"
     gene            249..844
                     /locus_tag="VKX24_02535"
                     /pseudo
     CDS             249..844
                     /locus_tag="VKX24_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015102450.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            complement(902..1453)
                     /locus_tag="VKX24_02540"
     CDS             complement(902..1453)
                     /locus_tag="VKX24_02540"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HLJ07385.1"
                     /translation="MTGARADAIELLTSDHREVEQFFRQYEAATHDDGVAHHAAEQII
                     KELSVHAAIEEMILYPTMRQVAPDQKGLVDHSLEEHQEVKELLGRVDGKPANDAEVRK
                     LFGELKSSVEEHVSEEEGKLFPALRQHVKEDQLMELGEKMAKAKAMAPTHPHPNAPNT
                     PPGNIVAGPLAAIADKVRDFLRQ"
     gene            complement(1532..1735)
                     /locus_tag="VKX24_02545"
     CDS             complement(1532..1735)
                     /locus_tag="VKX24_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009101909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HLJ07386.1"
                     /translation="MTDAVRDTDDFEREAARRRTSFAAELWDFMRHNKKWWLTPIILI
                     LVLMAVLVVLGGSGAAPFLYPLF"
     gene            complement(1747..2163)
                     /locus_tag="VKX24_02550"
     CDS             complement(1747..2163)
                     /locus_tag="VKX24_02550"
                     /inference="COORDINATES: protein motif:HMM:NF039992.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SxtJ family membrane protein"
                     /protein_id="HLJ07387.1"
                     /translation="MAITAVNRNPSPADLRTFGRLLIPFVALFGLVVRLRTGSAGAGL
                     AVWIVGGLLAAVFLAVPSARRGIFVGWSAVTYPIGWVVSHAVLAVVFYLVITPIGVVL
                     RRVSRDPLDRRFEPTRPSYWTERHGVPAVGRYFRQF"
     gene            complement(2178..>3781)
                     /locus_tag="VKX24_02555"
     CDS             complement(2178..>3781)
                     /locus_tag="VKX24_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002647749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyltransferase N-terminal
                     domain-containing protein"
                     /protein_id="HLJ07388.1"
                     /translation="MTYLATAPKGFRSFARAMPVWLDQKLHLGKELNRGLGRGYRKRY
                     VFAEHHESHAASAFFPSPFEEAAVLTLDGVGEWATASLGVGRGHRLTLEAELHFPHSV
                     GMLYSAFTSFCGFKVNSGEYKLMGLAPYGEPVYADLIRKELLDLKADGSLKLDQRYFD
                     YCAGDRMTSRRFEAAFGGPPRRPDEPITQREMDLAASIQAVTEDILLACAAEAHRRTG
                     LADLCLAGGVALNCVGNGRILREGPFENIWIQPAAGDAGGSLGVALFIWHHLLGNPRT
                     PVPGDSQHGSLLGPRYSRPEIEAFLAGAGARWTTIADEAALCDEVARLLADGKVVGWF
                     SGRMEFGPRALGARSILADPRRPEMQSLLNLKIKFRESFRPFAPSVLAGDAAGWFGLR
                     PGDESPYMLLTAPVAEGHRHPVEDAGALTGLEKLQLVRSDVPAVTHVDWSSRVQTVDP
                     VRHGRYHRLLTAFGALTGCPVLVNTSFNVRGEPIVCTPADAWRCFLATDMDVLVLEDA
                     VLHKGDQPGAAAFPVHEHLAQFAPD"
BASE COUNT          543 a         1290 c         1420 g          528 t
ORIGIN      
        1 gtcctcgccg tcgtaggcgc cggtgatctc gacgaccccc gacagcatga cgtagaagtc
       61 gtaggtggcg tcgccctcgg cgtagaggat ctcgccggcg tccacccggc gccgccggcc
      121 gaaccgctcc agcacgctga gctgttcggc ggtgagcgtc ggagcgctgg ggtcctcggt
      181 catggcggca ccatagccag gactgtcaaa tcggttcggc gccatcgcgc ccggatagac
      241 gagcggccat ggcgaaggtg gcgatcgtga cgggttcgga ctccgggatc ggcaaggcca
      301 cagccgtggc cctggcccgg gcgggcttcg acgtcctcgt caacaacgcc agcaccggcc
      361 actcggcgcc gttcctggac cacggcgtcg acgagtggcg ccgcgtcctc gacgtcgacc
      421 tcaccggccc gttctgctgc gcccagcggg ccgcccggcg catggtggcc gccggcgggg
      481 ggggcggatc gtcaacgtca cctcggtcca cgagcacgtc ccgctgcggg gctcggcggc
      541 ctactgcgcg gccaagggcg ggctcgggct gctgaccaag gtgatggcgc tggagctggc
      601 cgagcacggc atcaccgtca atgccgtcgc ccccggcgag atcgccacgc cgatgaccgg
      661 ccaggaggac gtcgacccgg cgacgcagga gcgcgacggc atcccgctgc accggcccgg
      721 cgacgcccgg gaggtggcgg cgctggtggc ctggctggcg gggccggagt cgtcctacgt
      781 caccggctcg tcctacgtgg tcgacggcgg catgctgctc atggccgccc aggccaaccg
      841 gtagcccgcc ggaccggcgc ccggcgcccg ccggaacgcg ggcgccgggt gagggtcacg
      901 cttactggcg caggaagtcc cgcaccttgt cggcgatggc ggccagcggg ccggccacga
      961 tgttgccggg cggggtgttg ggggcgttgg gatggggatg ggtcggggcc atcgccttgg
     1021 ccttggccat cttctccccc agctccatca gctggtcctc cttgacgtgc tggcgcaggg
     1081 ccgggaagag cttcccctcc tcctcggaga cgtgctcctc gaccgacgac ttcagctcac
     1141 cgaagagctt gcgaacctcg gcgtcgttgg ccggcttccc gtcgacccgg cccaggagct
     1201 ccttcacctc ctggtgctcc tcgaggctgt ggtcgaccag gcccttctgg tcgggggcca
     1261 cctggcgcat cgtggggtag aggatcatct cctcgatggc ggcgtggacc gacagctcct
     1321 tgatgatctg ctccgcggcg tggtgggcca cgccgtcgtc gtgggtggcc gcctcgtact
     1381 ggcggaagaa ctgctcgacc tcccggtgat cgctggtcag cagttcgatg gcgtcggccc
     1441 tggctcccgt catgccgggg ttcgtgctgg acatgggctt ccctttcgga tcagttggtt
     1501 gcccacgtcc ctacccagcc ggtgcggccc gtcaaaagag cggatagagg aagggtgcgg
     1561 cgccgctgcc gccgagcacg acgaggacgg ccatgagcac gaggatcagg atgatcgggg
     1621 tcagccacca cttcttgttg tggcgcatga agtcccacag ctcggcggcg aacgacgtcc
     1681 ggcgccgcgc tgcctcccgc tcgaagtcgt cggtgtcgcg cacggcatcg gtcacggtcg
     1741 gctcctctag aactggcgga agtagcgccc gacggcgggg acgccgtggc gctcggtcca
     1801 gtaggacggg cgggtgggtt cgaaacgccg gtcgagcggg tcccggctga cccgccggag
     1861 gacgacgccg atcggcgtga tcacaaggta gaacacgacg gcgaggacgg cgtgggacac
     1921 cacccagccg atcgggtacg tcaccgcgct ccagccgacg aagatccccc gccgggcgga
     1981 ggggacggcg aggaacaccg ccgccagcag gcccccgacg atccagacgg ccagccccgc
     2041 tccggcggag cccgtccgca accggacgac gaggccgaac agcgccacga aggggatcag
     2101 cagccggccg aaggtccgca ggtcggcggg gctggggttc cggttgacgg ctgtgatcgc
     2161 catgtggtct cggaggttca gtcgggggcg aactgcgcca ggtgctcgtg gacggggaag
     2221 gcggcggccc ccggctggtc gcccttgtgg aggacggcgt cctccaggac cagcacgtcc
     2281 atgtcggtgg ccaggaagca ccgccaggcg tcggccgggg tgcagacgat cggctcgccc
     2341 cgcacgttga acgacgtgtt caccagcacc gggcagccgg tcagcgcgcc gaaggcggtc
     2401 aacaggcggt ggtagcggcc gtggcggacg ggatcgaccg tctgcacccg gctggaccag
     2461 tcgacgtggg tgaccgccgg gacgtcggag cggacgagct ggagcttctc gagcccggtc
     2521 agcgcgccgg cgtcctccac cgggtggcgg tgaccctccg ccaccggcgc cgttaacagc
     2581 atgtaggggc tctcgtcgcc cgggcggagc ccgaaccaac cggcggcgtc gccggcgagg
     2641 acggacggcg cgaacggccg gaacgactcc cggaacttga tcttcaggtt gagcagcgac
     2701 tgcatctcgg ggcggcgggg atcggccagg atgctgcggg cgcccagcgc ccggggcccg
     2761 aactccatgc ggcccgagaa ccagccgacg accttgccgt cggccagcag ccgggcgacc
     2821 tcgtcgcaca gcgccgcctc gtcggcgatc gtcgtccagc gggccccggc gccggccagg
     2881 aaggcctcga tctccggccg gctgtagcgg gggccgagca gcgaaccgtg ctggctgtcg
     2941 ccgggcaccg gggtgcgggg attgccgagc aggtgatgcc agatgaacag cgccacgccg
     3001 agcgacccgc cggcgtcgcc ggccgcgggc tggatccaga tgttctcgaa cgggccctcg
     3061 cgcaggatgc ggccgttgcc gacgcagttg agggccacgc cgccggccag gcagaggtcg
     3121 gccagcccgg tacggcggtg ggcctcggcg gcgcaggcca gcaggatgtc ctcggtgacc
     3181 gcctggatcg aggcggccag gtccatctcc cgctgcgtga tcggctcgtc ggggcggcgg
     3241 ggcggcccgc cgaaggccgc ctcgaagcgg cgcgacgtca tccggtcacc ggcgcagtag
     3301 tcgaagtagc gctggtcgag cttcagggag ccgtcggcct tcaggtcgag cagctccttg
     3361 cggatcaggt cggcgtagac cggttcgccg tagggggcga gccccatcag cttgtactcg
     3421 ccggagttca ccttgaaccc gcagaaggag gtgaaggccg agtacagcat cccgacggag
     3481 tgcgggaagt ggagctccgc ctccagcgtg aggcggtggc cccgtccgac gccgaggctg
     3541 gccgtggccc actcccccac gccgtccagg gtgaggacgg cggcctcctc gaacggcgac
     3601 gggaagaagg cgctggcggc gtgggactcg tggtgctcgg cgaatacgta gcgcttgcgg
     3661 tagccgcggc cgaggccccg gttgagctcc ttgccgagat ggagcttctg gtcgagccag
     3721 accggcatgg cccgggcgaa ggaccggaag cccttgggag cggtggccag gtacgtcatc
     3781 a
//
LOCUS       DATGJT010000148         2580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_434752, whole genome shotgun sequence.
ACCESSION   DATGJT010000148 DATGJT010000000
VERSION     DATGJT010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434752"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1095)
                     /gene="ugpC"
                     /locus_tag="VKX24_02560"
     CDS             complement(<1..1095)
                     /gene="ugpC"
                     /locus_tag="VKX24_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013116204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HLJ07389.1"
                     /translation="MAAITLEHVEKRYGDGYPAVNDVSLDIADGEFMILVGPSGCGKS
                     TLLRMIVGLEEATGGEIRIAGRVVNDLPPRDRNLAMVFQNYALYPHLTVFENIAFPLR
                     LRKLAGEEVRRRVEEAAAVLELTEHLDRKPGQLSGGQRQRVAMGRAIVREADAFLFDE
                     PLSNLDAQLRGQMRTEIARLQQRLGVTTVYVTHDQVEAMTLGDRVAVLRKGVLQQVDT
                     PRALYQRPANLFVAGFIGSPAMNLVPATVDGRRIRLPFVDFELPEAVGGGGPAIAGLR
                     PEHLEDAAVVDAPARERGVAFDVTVDVLEWLGAEQYAYVPYAAPPELVEPLHRLAEEL
                     DRESARTTLVASIDPASRLRRGEAARLWFDP"
     gene            complement(1104..1919)
                     /locus_tag="VKX24_02565"
     CDS             complement(1104..1919)
                     /locus_tag="VKX24_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013882726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HLJ07390.1"
                     /translation="MRRVARIAGPVLIVVWTLVPLLWLLSLSLKGGDHIDDGRFWPAA
                     PTLHNYRTVFRTDLFTSALRNSIGISLIATVLSVILATLAAYAIARLDFPGKKLMLSV
                     ALAIAMFPTISLVGPLFDIWRSVGLYDTWPGLVIPYLSFTLPLSIWVLSAFFREIPWE
                     MEQAAQVDGATPWQAFRKVIVPLAAPGVFTAAILTFFFAWNDFVFGISLTSTGRARTV
                     PAALAFFTGASQFEQPTAAIAAAAVVVTIPVVAIVLAFQRRIVAGLTSGAVKG"
     gene            complement(1923..>2580)
                     /locus_tag="VKX24_02570"
     CDS             complement(1923..>2580)
                     /locus_tag="VKX24_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020580308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HLJ07391.1"
                     /translation="LITVVTVAVELVIGFAFASVMHRIVFGRRLVRTAVLVPYGIITV
                     VAAFAWRYAFALDTGFVDHVFGLGHLAWFGQRTPALFVIILAEIWKTTPFISLLLLAG
                     LAQVPGELLEAAEVDGATRVQRLFRVTLPNMKAAIMVALLFRTLDAYRIFDTVFVTTN
                     GAAGTETVSFLAYRQTITRTALGLGSAVSVLLFVSVVLIAVVFVKGFGVDLARARGER
                     "
BASE COUNT          442 a          854 c          971 g          313 t
ORIGIN      
        1 agggtcgaac caaagccggg ccgcctcgcc ccgccggagg cggctggcgg ggtcgatcga
       61 cgccaccagg gtcgtccggg ccgattcccg gtcgagctcc tcggccaggc ggtgcagcgg
      121 ttcgaccagc tccgggggag cagcgtaggg gacgtaggcg tactgctcgg cgccgagcca
      181 ctccaggacg tcgaccgtga cgtcgaacgc cacgccccgc tcccgggccg gggcgtcgac
      241 gacggcggcg tcctcgaggt gctcggggcg caggccggcg atggccggtc ccccgccgcc
      301 gaccgcctcc ggcaactcga agtcgacgaa gggcaggcgg atgcggcgcc cgtccacggt
      361 ggccggaacg aggttcatgg ccggggaccc gatgaacccg gccacgaaca ggttggccgg
      421 ccgctggtag agggcccgcg gcgtgtcgac ctgctgcagc acccccttgc gcagcaccgc
      481 cacccggtcc cccagcgtca tggcctcgac ctggtcgtgg gtgacgtaga ccgtcgtcac
      541 gcctaggcgc tgctggagac gggcgatctc cgtccgcatc tggccccgga gctgggcgtc
      601 gaggttggac aggggctcgt cgaagaggaa ggcgtcggcc tcccggacga tggcccgccc
      661 catcgccacc cgctgccgct gcccgcccga gagctggccg ggcttgcggt cgaggtgctc
      721 ggtcagctcg aggacggcgg ccgcctcctc cacccgccgc cgcacctcct cgccggccag
      781 cttgcgcagc cggagaggga aggcgatgtt ctcgaacacg gtgaggtggg ggtagagggc
      841 gtagttctgg aacaccatgg ccaggttgcg gtcccggggg ggcaggtcgt tcacgacccg
      901 gccggcgatc cggatctcgc cgccggtggc ctcctcgagc ccgacgatca tccgcagcag
      961 ggtcgacttc ccgcagcccg acgggccgac gaggatcatg aactcgccgt cggcgatgtc
     1021 aagcgacacg tcgttgacgg cggggtaccc gtcgccgtag cgcttctcga cgtgctccag
     1081 ggtgatggcc gccaccggac cccctatccc ttgacggcac cggacgtcag cccggcgacg
     1141 atgcggcgct ggaaggccag cacgatggcc acgaccggga tcgtcacgac cacggcggcg
     1201 gcggcgatgg ccgccgtcgg ctgttcaaac tgggacgccc cggtgaagaa ggccagggcg
     1261 gccggcacgg tccgggcccg gccggtcgac gtcagcgaga tgccgaacac gaagtcgttc
     1321 caggcgaaga agaacgtgag gatggcggcg gtgaagaccc cgggggcggc cagggggacg
     1381 atcaccttcc ggaaggcctg ccagggagtg gcgccgtcga cctgagcggc ctgctccatc
     1441 tcccagggga tctcccggaa gaacgccgac agcacccaga tcgacagcgg gagcgtgaac
     1501 gacaggtagg ggatcacgag accgggccag gtgtcgtaga ggccgacgga gcgccagatg
     1561 tcgaacagcg gccccaccag cgagatcgtg gggaacatgg cgatggccag cgccaccgag
     1621 agcatgagct tcttgcccgg gaagtcgagc cgggcgatgg cgtaggcggc cagcgtggcc
     1681 aggatcaccg agagcaccgt ggcgatcagc gagatgccga tcgagttgcg cagggcgctg
     1741 gtgaacaggt cggtacggaa caccgtgcgg tagttgtgca gggtcggcgc cgccggccag
     1801 aaccgcccgt cgtcgatgtg gtcgccgccc ttgagcgaca acgacaggag ccagagcagg
     1861 ggaacgaggg tccagacgac gatgaggacg ggcccggcga tgcgtgcgac gcgccgcacg
     1921 gttcagcgtt ctccccgggc ccgggccagg tcgacgccga agcccttgac gaagacgacg
     1981 gcgatcagca ccaccgagac gaacaggagc acggacacgg cggagcccag gccgagggcg
     2041 gtgcgggtga tcgtctggcg gtaggccagg aacgacacgg tctccgtgcc ggcggcgccg
     2101 ttggtggtga cgaacacggt gtcgaagatg cggtaggcgt cgagcgtccg gaacaggagg
     2161 gccaccatga tcgccgcctt catgttgggc agcgtcaccc ggaagagccg ctggaccctg
     2221 gtggcgccgt cgacctccgc cgcctcgagc agctcgcccg gcacctgggc cagcccggcc
     2281 agcagcagca gcgagatgaa cggcgtcgtc ttccagatct cggccaggat gatgacgaac
     2341 agcgccggcg tcctctgacc gaaccaggcg aggtgtccga ggccgaagac gtggtcgacg
     2401 aagccggtgt cgagggcgaa ggcgtagcgc caggcgaagg ccgccaccac ggtgatgatc
     2461 ccgtagggga cgaggacggc ggtgcggacg aggcgccgtc cgaagacgat ccggtgcatc
     2521 accgaggcga aggcgaagcc gatcaccagc tcgacggcga cggtgacgac ggtgatgagg
//
LOCUS       DATGJT010000149         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_124985, whole genome shotgun sequence.
ACCESSION   DATGJT010000149 DATGJT010000000
VERSION     DATGJT010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124985"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VKX24_02575"
     CDS             <1..449
                     /locus_tag="VKX24_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07392.1"
                     /translation="FGTNSARTIAALIQALGQPDKNTSLPVGQPCQATRRLQWANFQV
                     LVNEVVSQAGAGRPGFAGWYLGAPAATSLPFHTDKGIMIGSTVAQLKAAYGTDVTVAM
                     GEQGPGYNITTATGIILGALAPPNFSGLNDSGKVTTIQAGSYCGPG"
     gene            446..1504
                     /locus_tag="VKX24_02580"
     CDS             446..1504
                     /locus_tag="VKX24_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007463087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HLJ07393.1"
                     /translation="MRPAGVPPSLAVVAPPVEARIDALLAEETARWGVVDAGLLPPLS
                     ALRRFVLDGGKRLRPAFCHWAYAGAGGAPSDRAVVDAGAALELLHAFALLHDDVMDGS
                     ERRRGRACVHVDFAARHAAAGWRGEPRRFGEGVAILVGDLAFVYADLLMVDVPAEATA
                     IFNELRVELNIGQALDLIGTAEARRDTPMARRIARYKSGKYTVERPLHLGAALMGRLG
                     DLAEPLSAYGLPLGEAFQMRDDVLGTFGDPAVTGKPVGEDLREGKPTPLLAVATARAD
                     DDGRKLLDRVGSPDLGDDEIAAIQALMDETGARQETERLVDELADEAVAALDRAALTG
                     EAKAALTELAAFVAHRDR"
     gene            complement(1573..2289)
                     /locus_tag="VKX24_02585"
     CDS             complement(1573..2289)
                     /locus_tag="VKX24_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07394.1"
                     /translation="MINVRFAVATALTALMVGGLASIPAQAATAAPAGGSKPAVTQTG
                     TWDGQVQKDGGHYDDVGRACPESSPICYDIVARYRIVPLNASAARAVKKLAGGPARLT
                     GRLGPAQDSHHTGTLFVRTAGRPAPIARTVQVDESNNGQAVTLRPGDHLTVVLHSTYW
                     QFDAPSDPGVVSADGDPVYAAGGPKCGPPGSGCGTVTVHYTAGHDGRAVVSASRTSCG
                     EAMRCTPAQSRWSVKVNVAG"
     gene            complement(2379..>2607)
                     /locus_tag="VKX24_02590"
     CDS             complement(2379..>2607)
                     /locus_tag="VKX24_02590"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HLJ07395.1"
                     /translation="VTFTSSSTVTNYLAVAGDVPVPPVVACIGPITADTARAAGLTVG
                     VVAAEHTIVGLVRALVDVLGPDREKIDERRG"
BASE COUNT          339 a          961 c          966 g          341 t
ORIGIN      
        1 cgttcgggac gaactccgcc cggacgatcg ccgccctcat ccaggcgctg ggccagccgg
       61 acaagaacac ctcgctgccc gtgggccagc cctgccaggc cacccggcgc ctccagtggg
      121 ccaacttcca ggtcctcgtc aacgaggtgg tctcccaggc cggcgccggc cggcccggct
      181 tcgccggctg gtacctcggg gcgccggcgg ccacgtcgct cccgttccac accgacaagg
      241 ggatcatgat cggctcgacc gtggcccagc tgaaggcggc ctacggcacc gacgtgaccg
      301 tcgccatggg cgagcagggc ccgggctaca acatcaccac ggccaccggc atcatcctcg
      361 gcgccctggc cccgcccaac ttctcgggcc tgaacgactc cggcaaggtc acgacgatcc
      421 aggccggcag ctactgcggg ccgggttgag accggccggc gtcccgccga gcctggcggt
      481 ggtggcgcca ccggtggagg cccggatcga cgccctcctg gcggaggaga cggcccgctg
      541 gggcgtggtc gacgccgggc tgctgccgcc gctctcggcg ttgcgccgct tcgtgctcga
      601 cggggggaag cggctccggc ccgccttctg ccactgggcc tacgccggcg ccggcggcgc
      661 gccctccgac cgggcggtgg tcgacgccgg cgcggccctc gagctcctcc acgccttcgc
      721 cctgctccac gacgacgtta tggacggctc ggagcggcgc cggggccggg cctgcgtcca
      781 cgtcgacttc gccgcccgcc acgccgccgc gggctggcgg ggggagcccc gccgcttcgg
      841 cgagggcgtc gccatcctcg tcggcgacct ggccttcgtc tacgccgacc tgctcatggt
      901 cgacgtcccg gcggaggcga cggcgatctt caacgagctg cgggtggagc tgaacatcgg
      961 ccaggcgctg gatctgatcg gcaccgccga ggcccgccgg gacacgccga tggcccggcg
     1021 gatcgcccgc tacaagtcgg gcaagtacac ggtggagcgg ccgctgcacc tcggggcggc
     1081 gctgatgggc cgcctcggcg acctggccga gccgctgtcg gcctacgggc tcccgctggg
     1141 agaggcgttc cagatgcgcg acgacgtcct cggcacgttc ggcgatccgg ccgtgaccgg
     1201 caagccggtc ggcgaggacc tccgggaggg aaagcccaca ccgctactgg ccgtcgccac
     1261 cgcccgggcg gacgacgacg gccggaagct gctcgaccgg gtcgggtcac ccgacctggg
     1321 cgacgacgag atcgccgcca tccaggccct catggacgag accggcgccc gccaggagac
     1381 cgagcggctc gtcgatgagc tggccgacga ggccgtcgcc gccctcgacc gggcggcgct
     1441 gaccggcgag gcgaaggcgg ccctgaccga gctggccgcc ttcgtcgccc accgcgaccg
     1501 ctgacccgtc cgcttctggc gttcgtttac cggaatacag cggaaaagga acgccggttc
     1561 gagcctgggg ggtcagccgg cgacgttgac cttgaccgac cagcgggact gggccggcgt
     1621 gcagcgcatc gcctcgccgc agctcgtgcg gctcgccgag accaccgccc ggccgtcgtg
     1681 gcccgccgtg tagtggacgg tgaccgtgcc gcagccgctg cccggagggc cgcacttcgg
     1741 cccgccggcg gcgtagacgg ggtcgccgtc ggctgagacg acacccgggt cgctgggggc
     1801 gtcgaactgc cagtacgtcg agtgcagcac gacggtcagg tggtcgccgg gccggagggt
     1861 cacggcctgg ccgttgttcg actcgtcgac ctggaccgtc ctggcgatcg gggccggacg
     1921 gccggccgtg cggacgaaca gggtgccggt gtgatgggaa tcctgcgccg ggccgaggcg
     1981 gccggtcagg cgggccgggc caccggccag cttcttcacc gcccgggcgg cggaggcgtt
     2041 aaggggcacg atccggtagc gggccacgat gtcgtagcag atcgggctcg actcggggca
     2101 ggcccggccg acgtcgtcgt agtggccgcc gtccttctga acctggccgt cccacgttcc
     2161 ggtctgggtc acggcgggct tggagccgcc ggcgggcgcc gctgtggccg cctgggccgg
     2221 gatcgaggcc aggccgccga ccatcagtgc tgtcagggcc gtggctaccg caaaacggac
     2281 attgatcacg agagaacctt tcgaccgacc ggccccgatc cccttcgggc gccgatgtcc
     2341 ccaactgtcc accggttggt ggcgcggtcg gcgggcgatc aaccgcgccg ttcgtcgatt
     2401 ttctcccggt ccggcccgag gacgtcgacg agggctcgca ccaggccgac gatggtgtgc
     2461 tcggcggcga cgacgccgac ggtgaggccg gccgcccggg ccgtgtcggc ggtgatcggc
     2521 ccgatgcagg ccaccaccgg ggggacgggg acgtcccccg ccaccgccag gtagttggtc
     2581 accgtcgacg acgacgtgaa cgtgacg
//
LOCUS       DATGJT010000150         2451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_228517, whole genome shotgun sequence.
ACCESSION   DATGJT010000150 DATGJT010000000
VERSION     DATGJT010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228517"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1884
                     /gene="dnaG"
                     /locus_tag="VKX24_02595"
     CDS             <1..1884
                     /gene="dnaG"
                     /locus_tag="VKX24_02595"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HLJ07396.1"
                     /translation="AVAIPPDEVAQVRAATDIVALIVEQVALRQQGRRWVGLCPFHGE
                     KTPSFSVNAQEGLYYCFGCQASGDAISFLRATEMLDFAEAVRRLAARAGITLHESAAA
                     GSDATWRTQLLEVMESAVAWYHERLLSAPDAGAAREYLRSRGYDGDVVRRFRLGWAPS
                     DWDALCQGLKLSERLLTATGLGFVNRRGRRQDAFRARIIFPICDPSGRPIALGGRILP
                     PRPGGSEPTVGEPKYKNSTETPIYSKRRTLYALNWAKHGIVATGEVVVCEGYTDVIGF
                     FQAGVERAVATCGTALGEDHFRLLRNFGKRIVLAYDADSAGETATARVYEWERRHEVD
                     VAVAALPPGTDPAELAATDPKALAEAVTSAKPFLQFRLDRVLQAADLTTAEGRARAAE
                     AAIEVVAEHPDELVRDQYAMVVSDFCRLEPDVVRRRLEEARRRPTPRADHRRRNGPAP
                     AEADRSADADGPSAPPRRAVTPGADPSARPGLEALRLAIHRPEAADDRMEAVLFGDDL
                     QRRAFLALTAADSLHDAIESAAPDVADLLRRVAVEEPVVPEDDTVDPVEAVVTQLLRV
                     AAKRALSDLQVRARTTPDELSATAAETARVRRWLEQLDDPAGGGEAARRLLAWLLDRV
                     QED"
     gene            1941..>2451
                     /locus_tag="VKX24_02600"
     CDS             1941..>2451
                     /locus_tag="VKX24_02600"
                     /inference="COORDINATES: protein motif:HMM:NF015912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 factor domain-containing protein"
                     /protein_id="HLJ07397.1"
                     /translation="MALLPDGVQPAVFEEVLQRGRDRGVLTQEDLVEVVREVELTPEV
                     IEQLVSRVGDEGIQFNAEDHALDGDDGAVEDRARPKPRRTAPTEPKPSPNGTRSRAAS
                     TRSRSQSNGEYASSGAAEDPVHTYLKEIGKVELLSAELEVEMAKRVEEGLAAAARLAA
                     LEGEGDASVE"
BASE COUNT          344 a          905 c          911 g          291 t
ORIGIN      
        1 gccgtggcca tcccgcccga cgaagtcgcc caggtgcggg cggccaccga catcgtggcc
       61 ctcatcgtcg agcaggtggc actgcgccag caggggcgcc ggtgggtcgg cctctgcccc
      121 ttccacggcg agaagacacc ctcgttcagc gtgaacgccc aggaggggct ctactactgc
      181 ttcggctgcc aggcctcggg cgacgccatc agcttcctgc gggcgaccga gatgctcgac
      241 ttcgccgagg cggtccgacg gctggccgcc cgggccggca tcaccctgca cgagtccgcg
      301 gcagccggct ccgacgccac ctggcggacc cagctgctcg aggtgatgga gagcgccgtc
      361 gcgtggtacc acgagcggct gctgtcggcc cccgacgccg gcgcggcgcg cgagtacctg
      421 cgctcccgcg gctacgacgg cgacgtcgtg cgccggttcc gcctggggtg ggcgccgagc
      481 gactgggacg ccctctgcca ggggctcaag ctgtccgaac ggctgctcac ggcgaccggg
      541 ctcgggttcg tcaaccgccg cggccggcgc caggacgcgt tccgggcgag gatcatcttc
      601 cccatctgcg acccctcggg acggccgatc gccctcggcg ggcggatcct gccgccgagg
      661 ccgggcgggt cggagccgac ggtcggcgag cccaagtaca agaactcgac cgagaccccg
      721 atctactcca agcgccgcac cctgtacgcg ctcaactggg ccaagcacgg gatcgtggcc
      781 accggggagg tcgtggtctg cgagggttac accgacgtca tcgggttctt ccaggccggc
      841 gtggagcggg cggtcgccac ctgtgggacc gcgctcggcg aggaccactt ccgactgctg
      901 cgcaacttcg gcaagcggat cgtcctcgcc tacgacgccg actcggccgg ggagaccgcg
      961 accgcgcgcg tctatgagtg ggagcgccgc cacgaggtcg acgtcgccgt ggccgccctg
     1021 cccccgggaa ccgatccggc cgagctggcg gccaccgatc cgaaggccct ggccgaggcg
     1081 gtcacctcgg ccaagccgtt cttgcagttc cgcctggacc gcgtgctcca ggcggcggac
     1141 ctcacgaccg cagagggccg ggcccgggcg gcggaggccg cgatcgaggt cgtcgccgag
     1201 cacccggacg agctcgtccg ggaccagtac gccatggtcg tctcggactt ctgccggctc
     1261 gagccggacg tggtccggcg ccggctggaa gaggcgcgcc gccggccgac gccccgggcc
     1321 gaccaccgcc gacggaacgg gccggcgccc gccgaggccg accggtcggc cgacgccgac
     1381 ggcccttcgg cacctccgcg ccgggccgtc acgcccggcg ccgacccctc ggcgcggccc
     1441 gggctggagg cgctgcgcct ggcgatccac cggccggagg cggccgacga ccggatggag
     1501 gccgtgctct tcggggacga cctgcagcgg cgcgcctttc tcgccctcac ggcggccgac
     1561 agcctgcacg acgcgatcga gagcgcggcg cccgacgtcg ccgacctgct gcgacgggtg
     1621 gcggtcgagg agccggtcgt tcccgaggac gacacggtcg atccggtcga ggcggtggtc
     1681 acccagctgc ttcgggtggc ggccaagcgg gccctctccg acctccaggt tcgggcccgg
     1741 accacacccg acgaactcag cgcgaccgcc gcggagaccg cccgcgtgcg gcgctggctg
     1801 gagcaactcg acgatccagc gggtggcggc gaggccgcgc ggcggttgct agcgtggctc
     1861 ctcgacaggg tgcaggagga ttgatggccg ggcgggcccc acgcgatgcg cacactcggg
     1921 gcaaggcggc cgacggaccg atggccctgc tgcccgacgg cgtgcagccc gccgtgttcg
     1981 aagaggttct ccagcgcggc cgcgaccgcg gcgtgctcac gcaggaggac ctggtcgagg
     2041 tcgtgcgcga ggtcgagctc acccccgagg tgatcgagca actggtgtca cgcgtcggcg
     2101 acgagggcat ccagttcaac gccgaggacc atgcgctcga cggcgacgac ggcgcggtcg
     2161 aggaccgtgc tcgcccgaag ccgcggcgga ccgctccgac ggaacccaag ccctcgccca
     2221 acggcacccg cagccgggcc gcgagcacaa ggtcgcgctc gcagagcaac ggcgagtacg
     2281 ccagctccgg agcggccgag gaccccgtcc acacctacct gaaggagatc ggcaaggtcg
     2341 agctcctgag cgctgagctc gaggtggaga tggccaagcg ggtcgaggag gggctggccg
     2401 cggccgcccg cctggcggcg ctggaaggcg agggtgacgc atccgtcgag c
//
LOCUS       DATGJT010000151         4727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_540209, whole genome shotgun sequence.
ACCESSION   DATGJT010000151 DATGJT010000000
VERSION     DATGJT010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4727
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540209"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..863
                     /locus_tag="VKX24_02605"
     CDS             9..863
                     /locus_tag="VKX24_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019877421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HLJ07398.1"
                     /translation="MSDLLREGRSFSFEFFPPKTDEAEAQLQRTLLELAPLRPSFVSI
                     TYGAGGTTRERTHDLVVDILRSTDMTPMAHLCCAGHVESELRAILGRYRDEGVENILA
                     LRGDPPAELKLPPGDLGHAVELVQLAREIGSFSIGVAAHPEGHPASPDLATDRRHLAA
                     KLAEADFAVTQFFFRLEDYLRLVDDLRALGCDRPVVPGIMPVTNYSQVARFAALSGAE
                     FPADLAARLDAVAEHPAEVRRIGVEVASQLCGDLLDAGAPGLHFYTLNRSPATREIFA
                     NLGLSAAR"
     gene            876..1337
                     /locus_tag="VKX24_02610"
     CDS             876..1337
                     /locus_tag="VKX24_02610"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HLJ07399.1"
                     /translation="MATRRRLRDEDLDAVIGAVLRATQAFVGLALRSLSAAGTSITLP
                     QYRMLLILDARGDQNVRDLAARLGVDRSTATRMCNRLVNAGLIDRTTDPSDRRAVVIS
                     LTEPGRGVVKAVTRARREKVARLLQSIPPPRRRQLVDLLGEFAELAEQDPV"
     gene            1399..2064
                     /locus_tag="VKX24_02615"
     CDS             1399..2064
                     /locus_tag="VKX24_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07400.1"
                     /translation="MQGYDVDSLWLESGAHPDSPDGCLMEWVALISGLPKTDRPSCIN
                     QLVTSVAIHLNDTLDDVSRQRLKAFIPRLLRARRGPADDRIAVRLAIWSALSIAGSAP
                     AKLRGLHDETVEAAAGHLMGTVEEESCRQLAATCAEAGAKTRNTALYVAADAAHAACA
                     WADDPLPGASNAVAGALHWVLGNGDPLTWFDGLLAAHAAAWGLEVGDTPAVIREDVVC
                     SLG"
     gene            2070..3347
                     /gene="secY"
                     /locus_tag="VKX24_02620"
     CDS             2070..3347
                     /gene="secY"
                     /locus_tag="VKX24_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HLJ07401.1"
                     /translation="MFKVADLRGKVLFTIAIIAVFRLGCHIPLPYVDFGAIQQVQNQA
                     KLGGAVAFLDLFSGGALTSVAIFALGIMPYITASIIMQLLAVVIPKLEEWQNEGQVGQ
                     KKITQWTRYLTVALALMQSTGIIFSLHQGGGFLGTNQLKGIDLIPHFSAPRVLLMVIT
                     LTAGTAMIMWLGEVITQRGIGNGMSIIITVSVMSRLPAQGSGILASGNVFQFALVIVM
                     GVGLIVGIIFVESGQRKIPVQFAKRVVGRRMYGGGSTYIPMKVNQGGVIPPIFASSVL
                     YFPAMLVTIIPWHWATNFIQTKLVSGGSMVYIGCYAILIIFFCYFYNSITFNPQQQAD
                     IIRKQGGFIPGIRPGPPTERYLAKTLNRLTLPGSLFLTAIAVIPLLVFATAKISGFPF
                     GGTSILIIVGVVLETMKQIDSQLMMRNYEGFLR"
     gene            complement(3344..3514)
                     /locus_tag="VKX24_02625"
     CDS             complement(3344..3514)
                     /locus_tag="VKX24_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07402.1"
                     /translation="MEPFIDLSSPRPEPQRLTCLWIRGVDGRLECRWVPESEHGWDEA
                     FEQTPEPARRAG"
     gene            complement(3556..>4727)
                     /locus_tag="VKX24_02630"
     CDS             complement(3556..>4727)
                     /locus_tag="VKX24_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013427821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HLJ07403.1"
                     /translation="QAWGMPLSRAPSRRRHTAVAVACLLGLLPACSHSSSDGRLSARG
                     KTPPTTTAPAPVADPGNIYAADTPNALSQVVGGQPYRIYVPESAGDGVDVIDPVKMQV
                     IDRYTTGLDPQHVVPAWDLKTLYATNDLNDSLTAIDPWTGKRHGQNIPVADPYNMYFT
                     VDGSEAIVVAEAQQRLDFRDPHSFALREQVPVDCAGVDHVDFSVDGSYLIATCEFAGR
                     LVKVDVRRHAVIGYLDLKGGSPQDIKLDPTGRIFYVADRNLGGVHEIDAATFTDVGFL
                     KTGKDAHGLYVSRDAKDLYVTNRGSGTVTLVDFAGRAIATTWTIPGGGSPDMGGVSPD
                     GKVLWLSGRYDATVYAIDTGDGHLIGKVRVPNKPHGLAVWPQPGRFSLGHTGVMR"
BASE COUNT          680 a         1695 c         1592 g          760 t
ORIGIN      
        1 tgacccgcat ctccgacctg ctccgcgagg gccgctcgtt ctcgttcgag ttcttccctc
       61 cgaagaccga cgaggccgag gcccagctcc agcggacgct gctggagctc gccccgctgc
      121 gcccctcgtt cgtttcgatc acctacggcg ccggcggcac gacccgggag cggacgcacg
      181 acctcgtcgt cgacatcctc cgctccaccg acatgacgcc catggcccac ctgtgctgcg
      241 ccgggcacgt cgagagcgag ctgcgggcca tcctcggccg ctaccgcgac gagggcgtgg
      301 agaacattct ggccctccgg ggcgatccgc cggccgagct gaagctgccg cccggcgacc
      361 tgggccacgc cgtcgagctg gtgcagctgg cccgggagat cggctcgttc tcgatcggtg
      421 tggccgccca ccccgaaggc caccctgcct cccccgacct cgccaccgac cggcggcacc
      481 tggcggccaa gctggccgag gccgacttcg ccgtcaccca gttcttcttc cggctcgagg
      541 actacctgcg gctcgtcgac gacctccggg ccctcggctg cgaccggccc gtggtgcccg
      601 ggatcatgcc ggtgaccaac tactcccagg tcgcccggtt cgccgccctc tcgggcgccg
      661 agttccccgc cgacctcgcc gcccggctgg acgcggtggc cgagcacccg gccgaggtcc
      721 gccgcatcgg cgtcgaggtc gcctcccagc tctgcggcga cctcctcgac gccggcgccc
      781 cggggctgca cttctacacg ctcaaccgca gcccggcgac ccgggagatc ttcgccaacc
      841 tcggcctgtc ggccgcccgt tgaccggcgg cccaggtggc gacccggcgg cgcctgcgag
      901 acgaggacct cgacgccgtc atcggcgccg tcctccgggc cacccaggcc ttcgtcgggc
      961 tggcgctgcg gtcgctgtcg gcggccggca cgtcgatcac gctgccccag taccggatgc
     1021 tcctcatcct cgacgcccgg ggtgaccaga acgtccggga cctcgccgcc cggctcggcg
     1081 tcgaccggtc gacggccacc cggatgtgca accggctggt caacgccggg ctgatcgatc
     1141 gcaccaccga cccgtcggac cggcgggcgg tggtgatctc actgaccgaa cccggccgcg
     1201 gcgtggtcaa ggccgtgacc cgggcccggc gggagaaggt cgcacggctg ctgcagtcga
     1261 tcccgccgcc gcggcgccgg cagctcgtcg atctcctcgg cgagttcgcc gaactggcag
     1321 agcaggatcc cgtgtagtga ccacctacat cgcatgtaca ctgcaacgac tggtccccgg
     1381 tcgcccgtgg gagtgccgat gcagggatac gatgttgact cgctctggct ggagtcggga
     1441 gcccaccccg actcgccgga cgggtgtctg atggagtggg tggcgctgat atccgggctg
     1501 cccaagaccg atcggccgag ctgtatcaac cagctggtca cgtcggtggc catccacctg
     1561 aacgacaccc tcgacgacgt ctcccggcaa cggctcaagg cgttcatccc gcgcctcctc
     1621 cgggcgcgcc ggggtccggc cgacgaccgg atcgcggtcc gactcgccat ctggtcggcg
     1681 ctgtccatcg ccgggtcggc cccggccaag ctgcggggcc tccatgacga gacggtggaa
     1741 gcggccgccg gccacctgat gggaaccgtc gaggaggaga gctgccggca actggcggcc
     1801 acctgcgccg aggccggggc caagacgagg aacaccgcgc tctacgtggc ggccgacgcc
     1861 gcccacgccg cctgcgcctg ggccgacgac ccgctgcccg gcgcctcgaa cgccgtggcc
     1921 ggcgccctcc actgggtgct cggcaacggc gacccgttga cctggttcga cggcctcctg
     1981 gcggcgcacg ccgcggcctg gggcctcgag gttggggaca cccccgccgt gatccgcgag
     2041 gatgtggtgt gctctctcgg ctgaagaaca tgttcaaggt ggcggacctc cgggggaagg
     2101 tcctgttcac catcgccatc atcgccgtgt tccggctggg gtgccacatc ccattgccgt
     2161 acgtcgattt cggcgccatc cagcaggtcc agaaccaggc caagctcggt ggggccgtgg
     2221 ccttcctcga cctcttctcg ggcggggcgc tcaccagcgt cgccatcttc gcgctgggga
     2281 tcatgcccta catcaccgcc tccatcatca tgcagctcct ggcggtggtg atccccaagc
     2341 tcgaggaatg gcagaacgag ggccaggtcg ggcagaagaa gatcacccag tggacccgct
     2401 acctgacggt cgccctggca ctgatgcagt cgaccggcat catcttctcg ctgcaccagg
     2461 gcggcggatt cctcggaacc aaccagctga agggcatcga cctcattccg cacttcagcg
     2521 ctccccgggt cctgctgatg gtcatcacgc tgacggccgg cacggcgatg atcatgtggc
     2581 tcggcgaggt catcacccag cggggcatcg gcaacgggat gtcgatcatc atcaccgtct
     2641 ccgtcatgtc ccggctcccc gctcagggct cgggaatcct ggccagcggc aacgtcttcc
     2701 agttcgccct ggtgatcgta atgggggtcg gcctcatcgt cggcatcatc ttcgtggagt
     2761 ccggccagcg gaagattccc gtccagttcg ccaaacgcgt cgtgggccgg cgcatgtacg
     2821 gcggcgggag cacctacatc ccgatgaagg tcaaccaggg cggggtcatc ccgcccatct
     2881 tcgccagctc ggtgctctac ttcccggcca tgctggtgac gatcatcccc tggcactggg
     2941 cgacgaactt catccagacc aagctggtct cgggcgggag catggtctac atcggctgct
     3001 acgccatcct gatcatcttc ttctgctact tctacaactc gatcacgttc aacccccagc
     3061 agcaggccga catcatccgc aagcagggtg ggttcatccc cggcatccgg cccggccctc
     3121 ctaccgagcg gtacctggcc aagacactca accggctcac gctgccgggc tcgctgttcc
     3181 tgacggccat cgccgtcatc ccgctgctgg tgttcgccac ggccaagatc agcggcttcc
     3241 cgttcggcgg cacgtcgatc ctgatcatcg tcggcgtcgt gctggagacg atgaagcaga
     3301 tcgacagcca gctgatgatg cggaactacg aggggttcct gcgctagccg gcccggcggg
     3361 cgggctccgg cgtctgttcg aacgcctcgt cccagccgtg ctccgattcc ggcacccagc
     3421 ggcactcgag acggccgtcc acgccccgga tccagaggca cgtgaggcgc tggggctctg
     3481 gcctgggcga cgagaggtcg atgaacggct ccacccctcc aggttaacag accgtgtcgc
     3541 gatggcgacc gaaagctacc gcatgacgcc ggtgtggccc agggagaagc ggcccggctg
     3601 cggccagacg gcgagcccgt ggggcttgtt gggcacccgg accttgccga tgaggtggcc
     3661 gtcgccggtg tcgatggcat agaccgtggc gtcgtagcgg cccgagagcc acaggacctt
     3721 tccgtcgggt gagacgccgc ccatgtcggg gctgccgccg cccgggatcg tccacgtggt
     3781 ggcgatggcc cgcccggcga agtcgaccag cgtcaccgtc ccgctgcccc ggttggtgac
     3841 gtagaggtcc ttggcgtccc ggctgacgta gaggccgtgg gcgtctttgc cggtcttgag
     3901 gaaccccacg tcggtgaacg tggccgcatc gatctcgtgg accccgccca ggttccggtc
     3961 ggccacgtag aagatccgtc cggtggggtc gagtttgatg tcctgggggc tgccgccctt
     4021 gaggtcgagg tagccgatga cggcgtggcg gcgtacgtcg accttgacca gccgcccggc
     4081 gaactcgcag gtggcgatga ggtaggagcc gtcgacggag aagtcgacgt ggtcgactcc
     4141 ggcgcagtcg accggcacct gctcgcgcag ggcgaaggag tgcggatccc ggaagtcgag
     4201 ccgctgctgc gcctcggcca cgacgatcgc ctcgctgccg tcgaccgtga agtacatgtt
     4261 gtaggggtcg gcgacgggga tgttctggcc gtggcgcttg ccggtccagg gatcgatggc
     4321 cgtcaggctg tcgttcaggt cgttggtggc gtagagcgtc ttcagatccc aggcgggaac
     4381 cacgtgctga ggatcgaggc cggtcgtgta ccggtcgatg acctgcatct tcaccgggtc
     4441 gatcacgtcc acgccgtcgc cggcgctctc cggaacgtag atgcggtagg gctggccgcc
     4501 gacgacctgg ctgagggcat tcggggtgtc ggcggcgtag atgttgcccg ggtcggccac
     4561 cggcgccggc gccgtcgtcg tcggcggcgt cttgccccgg gccgagagcc gcccgtccga
     4621 ggaggaatga ctgcacgccg ggagcagccc gagcaggcat gcgaccgcca cggcggtgtg
     4681 gcggcgtcgg ctcggggccc tcgacagcgg catgccccaa gcctgcc
//
LOCUS       DATGJT010000152         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1265615, whole genome shotgun sequence.
ACCESSION   DATGJT010000152 DATGJT010000000
VERSION     DATGJT010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265615"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1134)
                     /locus_tag="VKX24_02635"
     CDS             complement(<1..1134)
                     /locus_tag="VKX24_02635"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HLJ07404.1"
                     /translation="MGDGDRLLFDLNDRQREAVTSSAAPLAILAGAGSGKTRVLTRRI
                     AWLAATGVVEARHVLAVTFTRKAAGELSDRLGRLGVRRAVTSGTFHGLALAQLRRRWG
                     DRGEPVPALLERKARILAPLLGGGPAVGPEAAEVAGEIEWAKARLIVPAGYEEAVAAA
                     GRATPRPAGEIASLYDRYETEKARRGVVDFDDLLWRLGDALEGDAEFAAVVRWRHRHL
                     FVDEFQDVNPAQFRLLRLWLGDRRDLCVVGDDDQAVYGFTGADAGFLVHFTRHFPGAG
                     VVRLEENYRSTPQVLAAAHAVLPGGAGRKKPLRPTLADGPLPTISGYASDRDEAAAVA
                     RALQSAHQPGAPWSGTAVLYRTNAQSAPLEAALRAAGVPYRVRG"
     gene            complement(1449..1955)
                     /locus_tag="VKX24_02640"
     CDS             complement(1449..1955)
                     /locus_tag="VKX24_02640"
                     /inference="COORDINATES: protein motif:HMM:NF022161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2505 family protein"
                     /protein_id="HLJ07405.1"
                     /translation="MRFEIEQVIGAPVESVARLYTERRFYERLGELPKLGRPEVLDRR
                     EDGSEVRLAVRFRFTGELSPAVTKVVDPARLSWVEESVHDLARHTVAFTMRPDNYADR
                     LRFEGSSRFEPGGEGGTRRLSEGDVVVRVPLVGRKVEGAIVSGLREHLAAEVAVVEEL
                     LGTRGGPE"
     gene            1989..>2278
                     /locus_tag="VKX24_02645"
     CDS             1989..>2278
                     /locus_tag="VKX24_02645"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLJ07406.1"
                     /translation="MLNEFAVWALGADRPGIVAAVTGVLLRMGCNLKDCSMTVLSRHF
                     AMMMLVEAPEDVPARALEAALAEAEANFDLTVAVRPLGEGAMLFVEGEPFIVS"
BASE COUNT          291 a          852 c          858 g          277 t
ORIGIN      
        1 cccccgcacc cggtacggga cgccggccgc ccgcagcgcc gcctccagcg gcgccgactg
       61 ggcgttggtc cggtagagca ccgccgtgcc cgaccacggc gcgccgggct ggtgggccga
      121 ctggagcgcc cgggccacgg ccgccgcctc gtcgcggtcg gaggcgtaac cggagatcgt
      181 cggcagcggc ccgtcggcca gcgtcggccg cagcggcttc ttccgcccgg ccccgccggg
      241 gaggacggcg tgggcggcgg ccagcacctg cggggtcgac cggtagttct cctccagccg
      301 gacgacgccg gcgccgggga agtggcgggt gaagtgcacc aggaagccgg cgtcggcccc
      361 agtgaacccg tacaccgcct ggtcgtcgtc gcctacgacg cagaggtcgc gccggtcgcc
      421 gagccagagc cggaggagcc ggaactgggc ggggttcacg tcctggaact cgtcgacgaa
      481 gaggtgccgg tgccgccacc gcacgacggc ggcgaactcg gcgtcgccct ccagcgcgtc
      541 gcccaggcgc cagaggaggt cgtcgaagtc gaccacgccc cggcgggcct tctcggtctc
      601 gtaccggtcg tagagcgagg cgatctcgcc ggccgggcgg ggcgtggccc ggccggcggc
      661 ggccaccgcc tcctcgtagc cggcggggac gatcaggcgg gccttggccc actcgatctc
      721 accggccacc tcggcggcct cggggccgac ggccgggccg ccgccgagga gaggcgccag
      781 gatgcgggcc ttgcgctcca gcagcgccgg caccggctct ccccggtcgc cccaccggcg
      841 gcggagctgg gccagggcga ggccgtggaa cgtgcccgac gtgaccgccc ggcgcacgcc
      901 gaggcgcccc agccggtcgg agagctcgcc ggcggccttg cgggtgaagg tgacggccag
      961 aacgtgccgg gcctcgacga cccccgtcgc cgccagccag gcgatccgcc gcgtgaggac
     1021 ccgcgtcttg cccgagccgg cgccggccag gatggccagc ggcgccgccg agctggtgac
     1081 ggcctcccgc tggcggtcgt tgaggtcgaa gaggagccgg tcgccatcgc ccatgggggg
     1141 acggtaccgg gggggtgcga caggaatggt ggataccggc ggggcggcgc ctctgcgact
     1201 ccgtcaccca tttcttccgc agcgccgttg acgcctgcgc cggggcgccg gtatcgtttc
     1261 cgtcggcggt caggcccgcg agggccgggc agccgaggga gcaccggagc cagggtgccg
     1321 agtccgtctt cgggcggaga gcggcgccac cgaagccggt cccgtcaggg gcaggcgaac
     1381 cggggcgagg gtggatcccg acggggagcg gccccgagga gcacggaatc cggttcgccg
     1441 gtggaaggct actcggggcc tcctcgcgtc ccgaggagtt cctcgacgac ggccacctcg
     1501 gcggccaggt gctcccgtag cccggagacg atggcgccct ccaccttccg gcccaccagc
     1561 ggcacccgga cgacgacgtc gccctccgag agccgccgcg tcccgccctc gccgcccggc
     1621 tcgaagcgcg acgagccctc gaaccgcagc cggtcggcgt agttgtcggg cctcatcgtg
     1681 aacgccacgg tgtggcgcgc caggtcgtgg accgactcct ccacccagct gagcctggcc
     1741 gggtcgacga ccttcgtcac cgccggcgac agctccccgg tgaagcggaa gcgcacggcc
     1801 agccgcacct ccgacccgtc ctcccgccgg tcgaggactt cgggccgccc cagcttcggc
     1861 agctccccga gccgctcgta gaagcgccgc tcggtgtaca gccgggccac cgactccacg
     1921 ggcgcgccga tgacctgctc gatctcgaac cgcatggccg gccacgctat tgcgtaggct
     1981 cccgtcccgt gctgaacgag tttgcggtgt gggccctcgg cgccgaccgg ccgggcatcg
     2041 tggccgccgt gaccggcgtg ctgctccgga tgggctgcaa cctgaaggac tgttcgatga
     2101 ccgtgctgtc acggcacttc gccatgatga tgctggtcga agcgcccgag gacgtgcccg
     2161 cccgggccct cgaggcggca ctggcggagg cggaggccaa cttcgacctc acggtggccg
     2221 tccgcccgct cggcgagggg gcgatgctgt tcgtcgaggg agagccgttc atcgtctc
//
LOCUS       DATGJT010000153         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_125360, whole genome shotgun sequence.
ACCESSION   DATGJT010000153 DATGJT010000000
VERSION     DATGJT010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125360"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VKX24_02650"
     CDS             <1..317
                     /locus_tag="VKX24_02650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="short-chain dehydrogenase"
                     /protein_id="HLJ07407.1"
                     /translation="KEELDRFRKQLVGQGVPAEGVSDEDLRKGVQMMGEAFRDNAPTS
                     AAQAATIILEGVRQNRWRILVGQDAERIDAEVRKDPEHSYDVDFWEKIQSESGLFGRL
                     GS"
     gene            complement(327..947)
                     /locus_tag="VKX24_02655"
     CDS             complement(327..947)
                     /locus_tag="VKX24_02655"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HLJ07408.1"
                     /translation="MELSEVIRRRRMIRSFAAEPIDPALVDRLLAAALRAPTAGNTRG
                     VAWLVLTGAETATYWEHTSTPEWREAYGRRFAGMSRAPVVALSLCSPAAYVNRYGEPD
                     KLGSGLGPTELGEGGEAAWPVPFWFGDAAFSTMLLLLGAVDAGLAAAFLGAFRGPELL
                     GALGVPDSWRLFGAVLLGRPDGNDVPSPSLGRRPDPGAGAVHRSRW"
     gene            1037..>2027
                     /gene="moeB"
                     /locus_tag="VKX24_02660"
     CDS             1037..>2027
                     /gene="moeB"
                     /locus_tag="VKX24_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HLJ07409.1"
                     /translation="MPSPRDLLNAAKAAIREIEPSDAEGRLSSAVFLDVREPDEYDQG
                     AIPGAVHLPRGNLEFQVEGKLPDKEAPVVVYCAGGVRSAFAAQTMEQLGYKDVSSLIG
                     GFNRWKDGGHPWETPRVLTPDQRNRYQRHLLLPEVGEAGQLKLLDAKVLLLGAGGLGS
                     PAALYLAAAGVGTIGIIDMDVVDASNLQRQILHNMDRIGERKVDSAKKTITAMNPDVS
                     VVTYDVRLGADNILDIFSGYDVILDGTDNFPTRYLVNDASLKLDIPVIHGSIFRFEGQ
                     ASVYMPHEGPCYRCQVPEPPPAELAPSCSEAGVLGVLPGIIGSIQAMETIKLLL"
BASE COUNT          320 a          746 c          694 g          267 t
ORIGIN      
        1 acaaagagga gctcgaccgc ttccgcaagc agctcgtcgg ccagggcgtg ccggccgagg
       61 gcgtctccga cgaggacctg cgcaagggcg tccagatgat gggggaggcg ttccgggaca
      121 acgcgccgac cagcgcggcc caggcggcca cgatcatcct ggagggcgtg cggcagaacc
      181 gctggcggat cctcgtgggc caggacgccg agcggatcga cgccgaggtg cgcaaggacc
      241 ccgagcactc ctacgacgtc gacttctggg agaagatcca gagcgagagc ggcctgttcg
      301 gtcggctcgg gagctgatcg tcggggtcac caacgcgagc ggtgcacggc gccagccccc
      361 gggtcgggcc ggcggccgag cgagggcgag gggacgtcgt tcccgtcggg gcgtccgagg
      421 aggacggcgc cgaacaaccg ccagctgtcg gggaccccca gcgcgccgag cagctcgggt
      481 ccccggaacg ccccgaggaa cgccgccgcc aggcccgcgt ccaccgcgcc gagcaggagg
      541 agcatggtgg agaacgcggc gtccccgaac cagaagggca ccggccacgc cgcctcgccc
      601 ccctcgccga gctcggtcgg gccgagcccc gacccgagct tgtcgggctc gccgtagcgg
      661 ttgacgtagg cggccgggga gcacagcgac agcgccacga cgggtgcccg agacatcccc
      721 gcgaagcggc ggccgtaggc ctcgcgccat tccggggtgc tcgtgtgctc ccagtaggtg
      781 gccgtctcgg ccccggtgag caccagccac gccaccccgc gggtgttgcc cgccgtggga
      841 gcgcggaggg ccgcggcgag gagccggtcg acgagggcag ggtcgatcgg ctcggcggcg
      901 aagctccgga tcatccggcg cctcctgatc acctcgctca gttccacgtc gtctccctcc
      961 ggtccgcccg ggccgggaat catgaccgtc ctggtagggt tttacttcgc gtcgatccgt
     1021 ccaaccgggg gtgtccatgc ctagtccccg cgaccttctg aacgccgcca aggccgccat
     1081 cagggaaatc gagccgtccg acgccgaggg ccggctctcg agcgccgtct tcctcgacgt
     1141 ccgcgagccc gacgagtacg accagggggc catccccggt gccgtccacc tgccccgcgg
     1201 caacctggag ttccaggtgg agggcaagct cccggacaag gaggcgccgg tcgtcgtcta
     1261 ctgcgccggc ggggtccggt cggccttcgc cgcccagacg atggagcaac tcggctacaa
     1321 ggacgtctcc tcgctgatcg gcggcttcaa ccgctggaag gacggtgggc atccctggga
     1381 gacgccccgg gtgctcaccc cggaccagcg caaccggtac cagcgccacc tgctcctgcc
     1441 cgaggtcggc gaggccggcc agctgaagct cctcgacgcc aaggtcctcc tgctcggggc
     1501 cggcggcctc ggctcgccgg ccgccctcta tctcgcggcc gccggagtgg gcacgatcgg
     1561 gatcatcgac atggacgtgg tcgacgcgtc caacctgcag cgccagatcc tccacaacat
     1621 ggaccgcatc ggcgagcgca aggtggactc ggccaagaag accatcaccg ccatgaaccc
     1681 cgacgtgagc gtcgtcacct acgacgtccg cctcggcgcc gacaacattc tcgacatctt
     1741 ctccgggtac gacgtcatcc tcgacggcac ggacaacttc ccgacccgct acctcgtaaa
     1801 cgacgcctcc ctgaagctgg acatccccgt catccacgga tcgatcttcc gcttcgaggg
     1861 ccaggccagc gtgtacatgc cccacgaggg gccgtgctat cggtgccagg tccccgagcc
     1921 gcccccggcc gagctggcgc cctcctgctc ggaggccggc gtcctcgggg tgctgcccgg
     1981 catcatcggc agcatccagg ccatggagac gatcaagctt ctactcg
//
LOCUS       DATGJT010000154         2016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_540479, whole genome shotgun sequence.
ACCESSION   DATGJT010000154 DATGJT010000000
VERSION     DATGJT010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540479"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VKX24_02665"
     CDS             complement(<1..346)
                     /locus_tag="VKX24_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HLJ07410.1"
                     /translation="MQDADPERLTPPLSGGHPPAPGPRAVLGLTFDATRDEAQRAFRR
                     LARQTHPDAGGDAAAFRAVAGAWATLAPLLPAEPRPPRRPWPSPHVDAYRPVAGRIVW
                     AEERRRPAPGPRP"
     gene            483..1124
                     /locus_tag="VKX24_02670"
     CDS             483..1124
                     /locus_tag="VKX24_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012934910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HLJ07411.1"
                     /translation="MRVDIWSDVVCPWCYVGKRRFEAALARFPHRAGVEVHWRSFELD
                     PRAPRRREGDRLGHLAAKYGVDREQAEAMDRRITEAGREAGLDLRLAETQSGNTFDAH
                     RLLHLAADHGRAGDLKERLMRAHFTEGEPVADPAVLARLAVEAGLPAAEVDDVLAGDR
                     YANAVRADEQHARALGATAVPFFVIDETYGVAGAQPPDVFLNVLERAWSEQPD"
     gene            1326..1646
                     /locus_tag="VKX24_02675"
     CDS             1326..1646
                     /locus_tag="VKX24_02675"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012786641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HLJ07412.1"
                     /translation="MQKQDLIVGTGAEAVAGKKVSVQYVGVSYSTGKQFDASWDRGQP
                     FSFTLGEGDVIKGWDQGVPGMKVGGRRQLVIPPDLAYGPAGAPPDIGPNETLVFVVDL
                     LSVP"
     gene            1817..>2016
                     /locus_tag="VKX24_02680"
     CDS             1817..>2016
                     /locus_tag="VKX24_02680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07413.1"
                     /translation="METFRSSDCSTPPDEITATGRILVIGPPRSGTTWVEQVLGRAAG
                     ARVVHEPDNETCSPFALRAKATL"
BASE COUNT          271 a          764 c          734 g          247 t
ORIGIN      
        1 ccgggcgcgg accgggcgcc ggccgccggc gctcctcggc ccagacgatc cgcccggcca
       61 ccggacggta ggcgtcgacg tgaggcgagg gccacggccg gcggggcggc cggggctcgg
      121 cgggcagcag cggggcgagt gtggcccagg cgccggccac ggcccggaag gcggcggcgt
      181 cgcccccggc gtcggggtgg gtctgcctgg ccagccggcg gaaggcgcgc tgcgcctcgt
      241 cccgggtggc gtcgaacgtc aggccgagta cggcccgcgg cccgggggcc ggggggtgtc
      301 cccccgacaa aggcggcgtc agccgctcgg gatcagcgtc ctgcatggca cgtccttgtg
      361 tcgctgctcc gccgcctccg gcgacgggcg cagatccgtc tgcgcaccct ctccatcggc
      421 ccgcccgtcc ggcgattgag ccccgggaac agccggccgg gcgccggcgt tacgccggag
      481 cgatgcgagt ggacatctgg tcggacgtgg tctgtccctg gtgctatgtc gggaagcgcc
      541 gcttcgaggc cgccctggcc cggtttcccc accgggccgg cgtcgaggtg cactggcgca
      601 gcttcgagct cgacccccgg gcgccccgcc gccgcgaggg cgaccggctc gggcacctgg
      661 cggccaagta cggcgtcgac cgggagcagg ccgaggccat ggaccgccgc atcaccgagg
      721 ccggccggga ggcgggcctc gacctccggc tggcggagac gcagagcggc aacacgttcg
      781 acgcccaccg gctgctccac ctcgccgccg accatggccg ggccggcgac ctgaaggagc
      841 ggctgatgcg ggcccacttc accgagggcg agccggtcgc cgaccctgcg gtcctcgccc
      901 gcctggcggt cgaggcgggc ctgcccgccg ctgaggtcga cgacgtcctg gccggtgacc
      961 gctacgccaa cgccgtccgg gccgacgagc agcacgcccg ggctctcggc gccaccgccg
     1021 tccccttctt cgtgatcgac gagacctacg gcgtcgccgg cgcccagccg ccggacgtgt
     1081 ttctcaatgt gctggaacgg gcctggtccg agcagcccga ttagtgttct cgggccatgc
     1141 gcccgacgct tcgtaccgcc gttatcgctg ccatcgccgc cctgacggcg ctcgccccgt
     1201 ccgcctgcgg caagagcggc gggaccaagt ccgccggcag cagcaacagc accgcggcgg
     1261 ccggcgccgg gaaggcgggg acgaagccca ccgtcaccgt cccgtcgggc ccggcgccga
     1321 caacgctgca gaagcaggac ctgatcgtcg ggaccggcgc cgaggccgtc gccggcaaga
     1381 aggtctcggt gcagtacgtc ggtgtcagct actccaccgg caagcagttc gacgcctcgt
     1441 gggaccgcgg ccagcccttc tcgttcacgc tcggcgaggg cgacgtcatc aagggctggg
     1501 accagggcgt gccgggcatg aaggtcggcg gacgccgcca gctggtgatc ccgcccgacc
     1561 tggcctacgg gcccgccggc gccccgcccg acatcgggcc gaacgagacg ctggtcttcg
     1621 tggtcgacct gctgtcggtt ccgtagtcct tctcaaagcc gaacgcccca tgaagggccg
     1681 ctgaccgggg cgaaccgccc aaaacgcccc ggtgaacaat cgacggcacc ggaggatgct
     1741 ccggcgccgc tcccgaagtg gccggtaccc gggtctcgcc gaagacccgc cacgtcactc
     1801 tgcgggagag actcagttgg aaaccttcag gtcatccgac tgctcgacgc cccccgacga
     1861 gatcacagcc acgggacgga tcctggtcat cggtccgccc cggtccggga ccacctgggt
     1921 cgagcaggtt ctcggccggg ccgccggggc ccgggtcgtc cacgaacccg acaacgagac
     1981 gtgcagcccg ttcgccctgc gggccaaggc gacgct
//
LOCUS       DATGJT010000155         2137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1266082, whole genome shotgun sequence.
ACCESSION   DATGJT010000155 DATGJT010000000
VERSION     DATGJT010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266082"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1272)
                     /locus_tag="VKX24_02685"
     CDS             complement(100..1272)
                     /locus_tag="VKX24_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07414.1"
                     /translation="MSETQSPVDLETLSTAPAPPDVEVIIEPPPGPALSDQPWAGLAG
                     TVIVAGLVALLAVAPDGPQTALQVSIPLVTYALPVLVVVALWWGGWPADRLNRPAKVA
                     VNTVIIAAAAFGLLIAGQAIVGKVDIDGLFSQATDQAAGHLTGFPFTFPLAGMIFVAM
                     AQLTLINEGKPFDRLGRVWSGIAALGTSWAVGLVGYRLAANWNFVPAAGRSLLSLRNP
                     NGPVNALDIVGWLVCIVVWQVTCGLVLGGWPFNAIKATGARLFVANVTVIGGGWLTYL
                     LMHDLFHWSIPVIGGVGGSLVAGVVVAAMLFEAWPFGGESPAAAGFGVTVAAVAVAAA
                     VYWGLKALGNAGQDWTQYPVELWVGTTALVQVAAAGILYALVWDRWPLPRHRGNPD"
     gene            complement(1402..1599)
                     /locus_tag="VKX24_02690"
                     /pseudo
     CDS             complement(1402..1599)
                     /locus_tag="VKX24_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088064.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
     gene            1929..>2137
                     /locus_tag="VKX24_02695"
     CDS             1929..>2137
                     /locus_tag="VKX24_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07415.1"
                     /translation="MVVVVLTCAPRTWGAAVVVVVDATVVVVVDATVVVVVGGAVVVV
                     VSGWHGETQKTLCFTSEPRDPGAWIV"
BASE COUNT          325 a          733 c          782 g          297 t
ORIGIN      
        1 gctgttcgat ggcgcgggcc aagccctgga gcacgacggc tccggggcct cggcaccgca
       61 cattccggcg tagcggtctc gggcagaccg cgccgccact cagtcggggt tcccccggtg
      121 gcgaggcagc ggccagcggt cccagacgag ggcgtagagg atcccggccg cggccacctg
      181 caccagggcc gtcgtcccca cccagagctc gaccgggtac tgcgtccagt cctggccggc
      241 gttgccgagc gccttcaggc cccagtaaac ggcggcggcc acggcgacgg cggcgaccgt
      301 cacgccgaac ccggccgcgg ccggcgactc accgccgaac ggccaggcct cgaagagcat
      361 cgccgccacg accacgccgg cgacgagcga cccgccgacc ccgccgatga ccgggatcga
      421 ccagtggaag aggtcgtgca tcagcaggta cgtgagccac ccgccgccga tgacggtcac
      481 gttggccacg aacaggcggg cgcctgtggc cttgatggcg ttgaacggcc agccgccgag
      541 caccagcccg caggtcacct gccagacgac gatgcacacc agccagccga cgatgtcgag
      601 ggcgttgacg gggccgttgg ggttgcgcag cgacaggagc gaccggccgg cggcggggac
      661 gaagttccag ttggccgcca gccggtagcc gacgaggccc acggcccacg aggtacccag
      721 ggcagcgatc ccggaccaaa cccggccgag ccggtcgaag ggcttgcctt cgttgatgag
      781 ggtgagctgc gccatggcca cgaagatcat cccggccagc ggaaatgtga acgggaagcc
      841 ggtgaggtgg ccggcggcct gatcggtggc ctgcgagaac aggccgtcga tgtcgacctt
      901 gccgacgatg gcctgtccgg cgatgagcag cccgaaggcg gcggcggcga tgatgaccgt
      961 gttcacggcg accttcgccg ggcggttcag ccggtcggcg ggccagccgc cccaccagag
     1021 ggccactacg acgagcaccg gcagggcgta ggtcaccagc gggatcgaca cctgcagcgc
     1081 cgtctgcggc ccgtccgggg ccacggcgag cagggcgacg agacccgcca cgatgacggt
     1141 cccggccagg cccgcccagg gctggtcgct gagcgccggt ccggggggtg gctcgatgat
     1201 gacctcgacg tccggcggcg ccggtgcggt ggagagcgtt tcgaggtcga cgggcgactg
     1261 ggtctccgac atggctcgcc ttccttcccg tgcatatgga ttggaggaga tcctcacgcc
     1321 ccgggatacg cccgcaggtt ggcgttgccc tgaagtggcc ctgtgccgtc gctgatttca
     1381 cgggccccgc ctcattcaga gggccgtgag ctgcagcgac tcgatgaccc gcagcaactc
     1441 gtcgtagttg cgccccgtcg tcgtcgggta gacgaggatc agcttggcct tcttgtccgt
     1501 cccgatcacg aacacgctgc ggacggcctg gttgtcggcg agagtcctcg tcttcgggtc
     1561 gccggaggtg gcggccggca gcatcccgtc cttgaggcgg tccggattgg accgatgttc
     1621 aaggcctcgg ccgaacgagc cgaggaagcg tcgactactg accatcgccg gcaccgccgc
     1681 cgagcgcaag gaggtagagc cagcaacgtc cgggggcacc ggttccgatc gtgggcggaa
     1741 ccggttgccc cccggccata tctcaggcca gcttccgggc gggcctccgc gaggcatcca
     1801 gaagtcggag cgctcccccg agcgccatcg ccagcccggc gaagaacgtc aggcgggcgg
     1861 aacccgtccc cgtccggggc agcgtgccgg gccttgtctc cgtctcgccg aggacctggg
     1921 ttgggacggt ggtggtcgtg gtgctgacct gcgcgcccag aacctggggc gcggctgtcg
     1981 tcgtggtcgt cgacgcaacg gtcgttgtgg tcgtcgacgc gacggtcgtg gtcgtcgtcg
     2041 gcggagccgt ggtggtcgtg gtctccggct ggcatggcga gacccagaag accttgtgct
     2101 tcacgtcgga gccccgcgac cccggcgcat ggatcgt
//
LOCUS       DATGJT010000156         3216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1266138, whole genome shotgun sequence.
ACCESSION   DATGJT010000156 DATGJT010000000
VERSION     DATGJT010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266138"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VKX24_02700"
     CDS             <1..185
                     /locus_tag="VKX24_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07416.1"
                     /translation="MLVIEHDMPLIAAVSDEVIALELGRVIARGTPGEVLSHPRVVES
                     YLGTDEAAIARSGPRA"
     gene            complement(134..1147)
                     /locus_tag="VKX24_02705"
     CDS             complement(134..1147)
                     /locus_tag="VKX24_02705"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005476306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HLJ07417.1"
                     /translation="MPDKQMAIERAWRRAGAGGERPIMIGIAGDSASGKTTLTRGLVA
                     ALGADRITAICVDDYHRYDRVERKGLPFTALHPAGNYVDVMEQHLQLLALGQPVLKPV
                     YNHDTGTLDRPVLVEPSEFVIAEGLLPLHTRLARACFDVTVYLDPPEVIRRRWKLRRD
                     VAQRGYSEAEVDAELARREPESAAYIRPQRAHADIVIRFAPIEERGETPDDPLSAYVL
                     LRPTIAHPDLSGVISDDTRKAAHLKLLRDEDGKPVDALHVHAYAERSLTDRVEMALWR
                     ALQEPEPLPSGLGRIAALDAAGPDGAEARSEPLAVVQLLLLFHVFQARGPERAMAASS
                     VPR"
     gene            1246..1917
                     /locus_tag="VKX24_02710"
     CDS             1246..1917
                     /locus_tag="VKX24_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003919312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07418.1"
                     /translation="MEPTVETRPVRLLLVDDHQVVLEGLVSMLAAEPHRVAVLGATTE
                     PVEALRLAADLEPDIVLLDVRLKGASGLDLCQELTRRHENLKVVFFTVYDDEQYLFQA
                     LRVGAAGFLLKRTTAGELATHLERVMGGEVIIDPAIAGRVAVTAARLQSGEFWPGANL
                     GLTQRESEVLQLMVRGLSNRAIGRELYIGEETVKTHSRSIYRKLDVSDRSQAVAVALR
                     EGVFH"
     gene            2000..3148
                     /locus_tag="VKX24_02715"
     CDS             2000..3148
                     /locus_tag="VKX24_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020576417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HLJ07419.1"
                     /translation="MEVTSSDLNLREVAEHVAVLVTEATASDVCFVHVLDEARGRLVL
                     MGATPPFTDLSGTVELGLGEGVAGWVALHAEPAVVPDKWQDDRYVYIPALRGEDYESL
                     VSVPLLGRGQHVVGVLNVHARRPRRYGDLDVALLAQVGNLLARTIENARLYERLAARE
                     QTLEQFAARTIDAQELERRRLAGEIHDGISQRLISLWYHLQAAGANTSDPAALARELA
                     AAEDLTSAALDEARRAIAGLRPSVLDDLGLGPSLESLAHSVAGLDVDVDAEPCRLPAH
                     VEVALYRIAQEALQNVMKHAAARRVTVRLSETAAGGVRLVVEDDGVGFHPAERRGGGP
                     SYGLVGMRERAELVGATLQVTSAAGTGTRVEVELAAPSSRQRSTTRAE"
BASE COUNT          420 a         1117 c         1243 g          436 t
ORIGIN      
        1 cgatgctggt catcgagcac gacatgccgc tgatcgccgc cgtgtccgac gaggtgatcg
       61 ccctcgagct cggccgggtc atcgcccggg gcacgccggg cgaggtgctg tcgcaccccc
      121 gggtcgtgga gtcctacctc ggcaccgacg aggcggccat cgcccgctcc gggccccggg
      181 cctgaaagac gtggaacagc agcagcagct gcacgaccgc cagcggctcg ctgcgggctt
      241 cggctccgtc cgggccggcg gcgtcgagag cggcgatgcg gcccaggcct gacgggagcg
      301 gctcgggctc ctgcagggcc cgccacagcg ccatctccac ccggtcggtc agcgaccgtt
      361 cggcgtaggc gtggacgtgc agggcgtcga cgggcttgcc gtcctcgtcc cggagcagct
      421 tgaggtgggc ggccttgcgg gtgtcgtcgc tgatgacgcc ggacaggtcg ggatgggcga
      481 tcgtcggccg cagcaggacg taggccgaca gcgggtcgtc gggcgtctcg ccccgctcct
      541 cgatcggggc gaaacggatg acgatgtcgg cgtgggcccg ctgcggccgg atgtaggcgg
      601 ccgactccgg ctcgcgccgg gccagctcgg cgtcgacctc cgcctcgctg taaccgcgct
      661 gggcgacgtc ccggcggagc ttccagcggc ggcggatcac ctcagggggg tcgaggtaca
      721 cggtgacgtc gaagcaggcc cgggccagcc gggtgtgcag cggcagcaga ccctcggcga
      781 tgacgaactc cgagggctcg acgaggaccg gccggtcgag ggtgccggtg tcgtggttgt
      841 agaccggttt gaggacgggc tggcccaagg ccaggagctg caggtgctgt tccatgacgt
      901 cgacgtagtt gcccgccgga tggagcgccg tgaacggcag gcccttccgc tccacccggt
      961 cgtaacggtg gtagtcgtcg acgcagatgg ccgtgatgcg gtcggcgccc agggcggcga
     1021 cgagtccccg ggtcagcgtc gtcttgcccg aggcgctgtc cccggcgata ccgatcatga
     1081 tcggccgctc gccgccggcg ccggcccgcc gccacgcccg ctcgatggcc atctgcttgt
     1141 ccggcatgga ggagcacggt acgggcccgc ggcgcggccg gcgtcccccg gcgggggatg
     1201 cccgcggggg atgtggcggg gagccgacgg tgggagaatc cggtgatgga accgacggtc
     1261 gagacccggc ccgtccgcct gcttctcgtc gacgaccacc aggtggtgct ggaggggctc
     1321 gtgtcgatgc tggcggcgga gccgcaccgc gtggcggtgc tgggcgccac caccgagccg
     1381 gtcgaggcgc tgcggctggc ggccgacctg gagcccgaca tcgtcctgct cgacgtgcgg
     1441 ctgaagggcg ccagcggcct cgacctgtgc caggagctga cccggcgcca cgagaacctc
     1501 aaggtcgtct tcttcaccgt ctacgacgac gagcagtatc tgttccaggc tttgagggtc
     1561 ggggcggccg gcttcctcct caagcggacc accgccggcg agctcgccac ccacctcgag
     1621 cgggtgatgg ggggcgaggt gatcatcgac ccggccatcg ccggccgggt ggccgtcacg
     1681 gcggcgcggc tgcagagcgg cgagttctgg cccggcgcca acctcgggct cacccagcgg
     1741 gagagcgagg tgctgcagct catggtccgg ggcctgtcga accgggccat cggccgggag
     1801 ctgtacatcg gcgaggagac cgtcaagacg cacagccggt cgatctaccg caagctcgac
     1861 gtgagcgatc gttcacaggc ggtggccgtg gcgctgcggg aaggggtctt ccattaggcc
     1921 ggcgcccggg ccggcggaac ccggggccgg ggagtccggg ccatacctcc tcggcgagaa
     1981 ccggctcctg cgccggatca tcgaggtcac gtcgtcggac ctcaatctcc gggaggtggc
     2041 cgagcacgtc gccgtcctcg tcaccgaggc cacggcgtcg gacgtgtgct tcgtccacgt
     2101 cctcgacgag gcccgcgggc ggctggtcct catgggggcc acgccgccgt tcaccgacct
     2161 gtcggggacg gtggagctgg gtctcggcga gggtgtggcc ggctgggtgg cgctgcacgc
     2221 cgagccggcc gtggtgcccg acaagtggca ggacgaccgc tacgtctaca tccccgccct
     2281 gcggggcgag gactacgagt cgctggtgtc ggtgcccctg ctcggccggg ggcagcacgt
     2341 ggtcggcgtg ctcaacgtcc acgcccggcg accccgtcgc tacggcgacc tcgacgtcgc
     2401 cctgctggcc caggtgggaa acctcctggc ccgcaccatc gagaacgccc gcctctacga
     2461 gcgcctcgcg gcgcgggagc agacgctgga gcagttcgcc gcccggacga tcgacgccca
     2521 ggagctggag cggcgccggc tggcgggcga gatccacgac gggatcagcc agcggctgat
     2581 cagcctctgg taccacctcc aggcggcggg ggccaacacc tcggatccgg cggcgctggc
     2641 ccgggagctg gccgcggccg aggatctgac cagcgccgcc ctcgacgagg cccgccgggc
     2701 tatcgccggg ctgcggccgt cggtgctcga cgacctcggg ctcgggccca gcctggagag
     2761 cctggcccat tcggtggccg ggctcgacgt ggacgtcgac gccgagccgt gccggctccc
     2821 ggcccacgtc gaggtggcgc tgtaccgcat cgcccaggag gccctccaga acgtgatgaa
     2881 gcacgccgcc gcccggcggg tgacggtgcg cctgtcggag acggcggccg ggggggtccg
     2941 gctcgtcgtg gaggacgacg gcgtcggatt ccaccccgcc gaacgccggg gcggcggccc
     3001 gtcctacggg ctggtcggga tgcgggagcg ggccgagctg gtcggggcga cgcttcaggt
     3061 cacctcggcc gccggcaccg gaaccagggt ggaggtcgag ctggcggcgc ccagcagccg
     3121 gcagaggtcg acgacccggg ccgagtagcc ggcctcgttg tcgtaccagg ccaggacctt
     3181 ggtctgggtg cccggccccc gccgggtgga cacgag
//
LOCUS       DATGJT010000157         2669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_954859, whole genome shotgun sequence.
ACCESSION   DATGJT010000157 DATGJT010000000
VERSION     DATGJT010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954859"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1099
                     /locus_tag="VKX24_02720"
     CDS             <1..1099
                     /locus_tag="VKX24_02720"
                     /EC_number="2.7.7.65"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HLJ07420.1"
                     /translation="RPADTMARIGGDEFVILAEGLPAAEDARQLAARVCEAMEAPFDL
                     DGESIVCTISAGVATTADAGHSALALLQEADLALYKSKDGGRNRAEVFDEQLRTTALE
                     RLAAERMIRSAIAEDRLRAHYQPIVDLATGQVVRVEALVRIQGPDGLILPDAFIEVAE
                     EAGLLVSIDGYVLAEAVENAAGWVRELAGTDFGGVAVNLTGRHLSNSRFAQVVADALA
                     DTGLPPGWLAIEVTERVLMEASNSAMDSLRRVRAMGVPIGLDDFGTGHSSLASLRQFP
                     LDYLKIDRSLVHQFLHGGAEHVAMVTAIIDLAHALGLWVVAEGVETSEEFRTLAELRC
                     DQAQGFLFGAAEVPEAVAPAVRRRSARSVRS"
     gene            1390..1731
                     /locus_tag="VKX24_02725"
     CDS             1390..1731
                     /locus_tag="VKX24_02725"
                     /inference="COORDINATES: protein motif:HMM:NF014520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HLJ07421.1"
                     /translation="MVHVDRVTPLDDAVRDVVDIDLLRPRWMRNAACRGEGFNAWFPS
                     EEFGEDADAARRVCCGCRVRTDCLDYALAAGIRHGVWGGLSARERAAMAGATRRATAN
                     TPGRRTAGGAG"
     gene            complement(1751..>2669)
                     /locus_tag="VKX24_02730"
     CDS             complement(1751..>2669)
                     /locus_tag="VKX24_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012084523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ07422.1"
                     /translation="VIGATNRAADLDPALLRPGRFDRSIYFDLPGRSGRREIIDYYLA
                     KKAHDPELDDPGRRDTTAAMTSGYSPVMIEHLLDEALVWALRRGADRLSWADLQRAKM
                     TEEIGLAQPVEYTEAERRTIATHEAGHATVAWLVGKSRTLEVLSIIKRKHALGLLAHS
                     DREERFLKSQSEVHGLIQIALGGLVAEELFFGEISSGPSGDLRTATILAAQMIGSLGM
                     AGSLFSYEAMQMPNTDIVTRVASSDDGRATIERKLETARSEVRAMLGEHRGVVEALRD
                     ALVERHELIGDEILDVIVHAEPESPPPEP"
BASE COUNT          356 a          958 c          966 g          389 t
ORIGIN      
        1 ccgccccgcc gacacgatgg cccggatcgg cggcgacgag ttcgtgatcc tcgccgaagg
       61 gctgcccgcc gccgaggacg cccgccagct ggcggcccgg gtgtgcgagg cgatggaggc
      121 gcccttcgat ctcgacgggg agtcgatcgt ctgcacgatc agcgccgggg tggccacgac
      181 ggccgacgcc gggcacagcg cgctggcgct gctgcaggaa gccgacctgg cgttgtacaa
      241 gtccaaggac ggcggccgca accgggcgga ggtcttcgac gagcagctcc gcacgacggc
      301 cctcgaacgg ctcgccgccg agcggatgat ccgcagcgcc atcgccgagg accgcctccg
      361 ggcccactac cagccgatcg tggacctggc gaccggccag gtcgtgcggg tcgaagcgct
      421 ggtccgcatc cagggccccg acgggctgat cctcccggac gccttcatcg aggtcgcgga
      481 ggaggccggc ctgctggtga gcatcgacgg ctacgtactc gccgaggcgg tcgagaacgc
      541 cgccggatgg gtgcgggaac tggccggcac cgacttcggt ggtgtcgccg tcaacctcac
      601 gggccggcac ctctcgaact cccgcttcgc ccaggtcgtc gccgacgcac tggccgacac
      661 cgggctgccg cccggttggc tggcgatcga ggtcaccgag cgggtcctga tggaggcgtc
      721 gaactcggcc atggactccc tgcgccgcgt ccgggcgatg ggcgtgccga tcggcctcga
      781 cgacttcggg acgggccact cctcgctcgc ctccctccgc cagttccccc tcgactatct
      841 caagatcgac cggtccctcg tccaccagtt cctccacggc ggtgcggaac acgtggccat
      901 ggtcacggcc atcatcgatc tcgcccacgc cctcggactc tgggtcgtcg ccgaaggggt
      961 cgagaccagc gaggagttcc ggaccctggc cgagctgcgg tgcgaccagg cccagggctt
     1021 cctcttcggt gcggcggagg ttcccgaggc cgtcgccccc gccgtcaggc gccggtcggc
     1081 gcgctccgtg cggagttgaa gacccgagct cggcggccct gtgcggggcc cttggacggc
     1141 gcgctgtcgc ccgttgacga ccgtgttacc gtcgaatcgc catgccggga gttcaccggt
     1201 gatggcggcg ccgctccaga ccctggttgc gcacaaccga ccgatagaac agcgtcgccc
     1261 gtccccacga ggtctgtccc gccgtgcact gcatgaacgg cgcagcgcct cccgaaggtg
     1321 ggcgcacccg aggcccctcg gcggtcgaga ccccgccccg gtcggctccg acagtgaacg
     1381 gagagcaccg tggtgcacgt cgaccgcgtc acaccgctcg acgacgccgt ccgtgacgtc
     1441 gtcgacatcg acctgctgcg cccccgctgg atgcgcaacg ccgcctgccg gggtgaggga
     1501 ttcaacgcct ggttcccctc ggaggagttc ggcgaagacg ccgatgccgc ccggcgggtc
     1561 tgctgcggct gccgggtgcg caccgactgc ctcgactacg ccctcgccgc cggcatccgc
     1621 cacggtgtgt ggggcgggct ctccgcccgg gaacgggcgg cgatggccgg cgcgacgcgg
     1681 agggcaaccg ccaacacgcc gggccgtcgg acggcaggcg gggccggctg agcggccccc
     1741 tcccggtgac tcatggttcg ggcggcggtg actcgggctc ggcgtggacg atgacgtcga
     1801 ggatctcgtc gccgatgagc tcgtggcgct cgacgagggc gtcgcgcagc gcctcgacca
     1861 cgccccggtg ttcgcccagc atggcccgga cctcgctccg ggccgtctcg agcttgcgct
     1921 cgatggtggc ccggccgtcg tcggaggacg ccacccgggt gacgatgtcg gtgttgggca
     1981 tctgcatcgc ctcgtaggag aacaggcttc cggccatgcc caggctgccg atcatctggg
     2041 ccgccaggat ggtggcggtc cggaggtcac ccgagggacc ggagctgatc tcaccgaaga
     2101 agagctcttc ggccacgagg ccgccgaggg cgatctggat cagcccgtgc acctcggact
     2161 gcgacttcaa gaagcgctcc tcccggtccg agtgggcgag gaggccgagg gcgtgcttgc
     2221 gcttgatgat cgagaggacc tcgagcgtgc ggctcttccc caccagccag gcgacggtgg
     2281 cgtggcccgc ctcgtgggtg gcgatcgtgc gccgctcggc ctcggtgtac tccaccggct
     2341 gggccagccc gatctcctcg gtcatcttgg cccgctgcag gtcggcccag ctgagccggt
     2401 cggcaccccg gcgcagcgcc cacaccaggg cctcgtcgag gaggtgctcg atcatcaccg
     2461 ggctgtagcc cgacgtcatg gcggcggtgg tgtcccgccg gcccgggtcg tcgagttcgg
     2521 gatcgtgggc cttcttggcc aggtagtagt cgatgatctc ccgccgcccc gaccggccgg
     2581 gcaggtcgaa gtagatggag cggtcgaagc gcccggggcg cagcagggcg gggtcgaggt
     2641 cggcggcgcg gttggtcgcc ccgatgacg
//
LOCUS       DATGJT010000158         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_747698, whole genome shotgun sequence.
ACCESSION   DATGJT010000158 DATGJT010000000
VERSION     DATGJT010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_747698"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VKX24_02735"
     CDS             <1..214
                     /locus_tag="VKX24_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017934492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07423.1"
                     /translation="RLDEATMGTKVESACRFVERTGKRAAIGLLAEAAAVCAGSAGTQ
                     IVASELDDAVIAERDRPAPPVRHASR"
     gene            446..1840
                     /locus_tag="VKX24_02740"
     CDS             446..1840
                     /locus_tag="VKX24_02740"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HLJ07424.1"
                     /translation="MDAPQPPTPRPVTEIVSLTRLGTAIFSVIALMLALGALVVASDK
                     NGSGGTKVQGGAVQAASTVLAASAIPADATPVSLTEFAINPKMVMVNKGGALKVTDDG
                     AAQHTLSVEGTDIVTPTLDPKGAVGLSLASLAPGNYTLSCTIPGHKAAGMSAQLMVMA
                     DGSAAAAAPSSAEATNADAMDAAMAARTKAFPAKTAGVGGQLLPPVLLPDGTKEFDLT
                     TKIVDWEIEPGKFVKAWTYNGVVPGPTLKVAVGDKVKVVVKNELPESTSVHFHGLKTP
                     NDMDGVPDITQTPIKPGATFTYAFTAQGPAVGMYHSHQDAVTQVPNGLAGAFLIGEEP
                     LPHGVTVSQELPMMLNDSGTIGLSINGKSFPATAPVVANLGDYVLVHYLNEGVMAHPM
                     HLHGLVQTVIAKDGIPLVQPYDADTILVGPGERYSVLIHADTAGIWAWHCHILPHAES
                     AQGMFGMVTAMVVK"
     gene            1904..>2235
                     /locus_tag="VKX24_02745"
     CDS             1904..>2235
                     /locus_tag="VKX24_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07425.1"
                     /translation="MTTTPTTGRRPTELPGSPWDEQLLAHFEEHVEGELDLLQAYLAI
                     RDTGPEHIRYLIDMILEDEGRHHRTFKELANRIRSDIDFRDYEPMVPYLRRVAADREA
                     VVEATDRLL"
BASE COUNT          382 a          829 c          720 g          304 t
ORIGIN      
        1 ccgcctcgac gaggcgacca tggggacgaa ggtggagtcg gcctgccggt tcgtggaacg
       61 aaccgggaag cgggcggcca tcggcctgct ggccgaggcg gcggccgtct gcgccggctc
      121 cgcgggaacg cagatcgtgg cgtcggaact cgacgacgcc gttattgcag agcgggaccg
      181 gccagcaccg ccagtacgtc acgcatcgag atgaggccga tggcccgctc cccgcgggcc
      241 acggccagat gacggatctc gtcgtggatc tgcccggcgg cctcccttcg cgccgcagcc
      301 gcgccagacg tcccatgccc cctccgacga gatggcgcac tcgggacttt tggccctgcc
      361 cgggctgacc tctgccccct gcccgattcc cgggccgtcc tcgatgctgg caccgacacc
      421 cgcagcgtgg ccatggaggt tcccgatgga cgccccgcaa ccgcccaccc ctcgaccggt
      481 gaccgagatc gtcagcctca cccggctggg cacggcgatc ttctccgtga tcgcgctcat
      541 gctggccctc ggagccctgg tcgtggcctc ggacaagaac ggaagcggcg ggacgaaggt
      601 ccagggcgga gcggtgcagg cggcgtcgac ggtgctggcc gcctcggcca tcccggccga
      661 cgccaccccg gtctcgctga cggagttcgc catcaacccc aagatggtga tggtcaacaa
      721 gggcggcgcc ctcaaggtga ccgacgacgg cgcggcgcag cacacgctct ccgtcgaggg
      781 taccgacatc gtcaccccga ccctcgaccc caagggcgcc gtcggcctgt cgctggcctc
      841 gctggctccc gggaactaca cgctgtcgtg cacgatcccg ggccacaagg cggccggcat
      901 gtcggcgcag ctgatggtca tggccgacgg ttcggcggcc gcggcggcgc cgtcctcggc
      961 cgaggcgact aacgccgacg ccatggacgc cgccatggcc gcccgcacca aggccttccc
     1021 ggccaagacg gcgggggtcg gcggccagtt gctcccgccg gtcctgctgc ccgacgggac
     1081 gaaggagttc gacctcacga ccaagatcgt cgactgggag atcgagcccg gcaagttcgt
     1141 gaaggcctgg acctacaacg gtgtcgtccc gggcccgacc ctgaaggtcg ccgtcggcga
     1201 caaggtcaag gtcgtggtga agaacgagct ccccgagtcg accagcgtcc acttccacgg
     1261 cctgaagacg ccgaacgaca tggacggggt gcccgacatc acgcagacgc cgatcaagcc
     1321 cggcgccacg ttcacctacg ccttcaccgc ccagggtccg gcggtgggga tgtaccactc
     1381 ccaccaggac gccgtgacgc aggtgcccaa cgggctcgcc ggggcgttcc tcatcggcga
     1441 ggaacccttg ccccacggcg tgacggtcag ccaggaactg ccgatgatgc tgaacgactc
     1501 gggcacgatc ggcctgtcga tcaacggcaa gtcgttcccc gccaccgctc cggtcgtggc
     1561 caacctcggc gactacgtcc tcgttcacta cctcaacgaa ggcgtgatgg cgcatccgat
     1621 gcacctccac ggcctcgtcc agacggtcat cgccaaggac ggaatcccgc tggtccagcc
     1681 ctacgacgcc gacacgatcc tcgtcggccc tggggagcgc tacagcgtgc tgatccacgc
     1741 cgacaccgcc ggcatctggg cctggcactg ccacatcctg ccccacgccg aatccgccca
     1801 gggcatgttc gggatggtca ccgccatggt cgtgaagtag cggcacccgg cggaaacccg
     1861 tctgagaacg aacgaccgac cggtcagtga caaggaggga accatgacga ccaccccgac
     1921 gaccggccgg cgaccaacgg agctccccgg gtccccctgg gacgaacagc tgctggccca
     1981 cttcgaggag cacgtcgagg gcgagctcga cctgctccag gcctacctcg ccatacggga
     2041 caccggtccc gagcacatcc gctacctcat cgacatgatc ctcgaggacg aaggccgcca
     2101 ccaccggacg ttcaaggagc tggccaaccg catccgctcc gacatcgact tccgggacta
     2161 cgaaccgatg gtgccctacc tcaggcgcgt tgcggccgat cgggaagccg tcgtcgaggc
     2221 gaccgaccgt ctcct
//
LOCUS       DATGJT010000159         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_21970, whole genome shotgun sequence.
ACCESSION   DATGJT010000159 DATGJT010000000
VERSION     DATGJT010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21970"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1053
                     /gene="ftsZ"
                     /locus_tag="VKX24_02750"
     CDS             <1..1053
                     /gene="ftsZ"
                     /locus_tag="VKX24_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012935225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HLJ07426.1"
                     /translation="GGGTNAVSRMVDAGLRGVEFIAANTDAQALAMSEADVKLHIGTE
                     LTKGLGAGANPEMGFGAAAESRDDIKEVLKGADMVFVTAGEGGGTGTGAAPVIAEIAK
                     NEIGALTVGVVTRPFEFEGAKRAMQAEEGIRKLREVVDTLLVIPNERLLTVVERRTSI
                     IDAFREADNVLRQGVQGITDLITIPGLINLDFADVRTIMTDAGTAVMGVGAATGESRA
                     ADAARAAISSPLLEEPIDGATGILLNITGGRNLGLFEVNEAAEIIQNAADRDANIIFG
                     AVIDENMHDEVQVTVIAAGFERWEGVGRGAKAMDAGASVLGARGTAAPVDIFADSDDD
                     EIELGDDDFDVPSFLR"
     gene            1099..1779
                     /locus_tag="VKX24_02755"
     CDS             1099..1779
                     /locus_tag="VKX24_02755"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate enzyme"
                     /protein_id="HLJ07427.1"
                     /translation="MSQDGTHPGRIAARLAQVRDRIERAGGDPGTVTVLAVTKGFGPG
                     AVEAAWAAGLAEVGENYAQELLAKREALAGRGPDGQRWHFLGAVQTNKVARLAPHVDC
                     WQSVSRHLEGERIARTAPGARVLVQVGFATGAGRPGAEPAAVPGLVEGLRRLDLDVAG
                     LMAVAPRGVAARSAFATVRRLADDLGLPVRSMGMTEDLELAVAEGSTLVRVGRALFGE
                     RPGPEAGG"
     gene            1841..>2129
                     /locus_tag="VKX24_02760"
     CDS             1841..>2129
                     /locus_tag="VKX24_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07428.1"
                     /translation="MPSLLKKTMVYLGLVDDEYDDYGDDYEDHGSSKAFTNVSRVETR
                     KPELDEPEIRPVVAQSSRIRALPRENGSNVTPSIRPQAVSPSVRPVAADSTP"
BASE COUNT          314 a          776 c          789 g          250 t
ORIGIN      
        1 ggcggcggca ccaacgccgt cagccgcatg gtcgacgccg gcctgcgcgg cgtcgagttc
       61 atcgccgcca acaccgacgc gcaggcgctc gccatgagcg aggcggacgt caagctccac
      121 atcggcaccg agctgacgaa gggcctcggc gccggcgcca acccggagat gggattcggc
      181 gcggcggcgg agtcgcgcga cgacatcaag gaggtgctca agggcgccga catggtgttc
      241 gtcaccgccg gcgagggcgg cggcaccggc accggtgcgg cgcccgtgat cgccgagatc
      301 gccaagaacg agatcggcgc cctgaccgtc ggcgtggtca cgcggccgtt cgagttcgag
      361 ggcgccaagc gggcgatgca ggccgaggag ggcatccgca agctgcgcga ggtcgtcgac
      421 acgctgctgg tgatccccaa cgagcgcctg ctgacggtcg tcgagcggcg cacctcgatc
      481 atcgacgcgt tccgcgaggc cgacaacgtg ctgcgccagg gcgtccaggg catcacggac
      541 ctgatcacga tcccgggtct catcaacctc gacttcgccg acgtgcgcac gatcatgacc
      601 gacgccggca ccgccgtgat gggcgtcggc gcggcgaccg gcgagagccg cgccgccgac
      661 gccgcgcgcg cggcgatctc ctcgccgctg ctcgaggagc cgatcgacgg cgccaccggc
      721 atcctgctga acatcacggg cgggcgcaac ctcggcctct tcgaggtcaa cgaggccgcc
      781 gagatcatcc agaacgccgc cgaccgcgac gccaacatca tcttcggcgc cgtcatcgac
      841 gagaacatgc acgacgaggt gcaggtcacc gtgatcgccg ccggcttcga gcgctgggag
      901 ggggtcggcc gcggcgcgaa ggcgatggac gcgggagcga gcgtcctcgg tgcccggggc
      961 accgcggcgc cggtcgacat cttcgccgac agcgacgacg acgagatcga gctcggcgac
     1021 gacgacttcg acgtgccctc cttcctccgc taggggaggg gaccgagcac cgcgcggccg
     1081 ggggtccccg ggccggcggt gagccaggac ggcacccacc ccggccgcat cgcggcccgc
     1141 ctggcccagg tccgcgaccg gatcgaacgg gccggcggag accccgggac cgtcaccgtg
     1201 ctcgccgtca ccaaggggtt cggccccggg gcggtcgagg cggcgtgggc cgccggcctc
     1261 gcagaggtcg gggagaacta cgcccaggaa ctcctggcca agcgggaggc gctcgccggg
     1321 cgaggccccg acggccagcg gtggcacttc ctgggagcgg tccagacgaa caaggtggcc
     1381 cggctggccc cccacgtgga ctgctggcag agcgtctccc gccacctcga gggcgagcgc
     1441 atcgcccgca cggcccccgg ggcccgggtt ctcgtccagg tgggcttcgc caccggagcg
     1501 gggcgccccg gcgcggagcc ggccgccgtg cccgggctcg tcgaggggct ccgccgcctc
     1561 gacctcgacg tggccggcct catggcggtg gcgccgcggg gcgtggccgc ccggtccgcc
     1621 ttcgcgacgg tgcgccggct ggccgacgac ctcgggctcc cggtccgctc catgggcatg
     1681 accgaggacc tggagctggc ggtggccgag gggtcgacgc tcgtccgggt cggccgggca
     1741 ctcttcggcg agcgccccgg gcccgaggcc ggagggtgaa cgggggtatc ggccgcagcc
     1801 ccatgggagc gatacgctgt cggcaaggag gcctcgaact ttgccctctt tgctgaaaaa
     1861 gacgatggtc tacctggggc tcgtcgacga cgagtacgac gactacgggg acgactacga
     1921 ggaccacggc tcctccaagg cgttcaccaa cgtgtcacgg gtcgagaccc gcaagcccga
     1981 gctcgacgag cccgagatcc ggccggtggt ggcccagtcg tcccgcatcc gggccctgcc
     2041 ccgggagaac ggctcgaacg tgacgccctc gatccggccc caggcggtgt cgccctcggt
     2101 gcggccggtg gccgccgact ccacgccca
//
LOCUS       DATGJT010000160         2306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1059842, whole genome shotgun sequence.
ACCESSION   DATGJT010000160 DATGJT010000000
VERSION     DATGJT010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1059842"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1175)
                     /locus_tag="VKX24_02765"
     CDS             complement(<1..1175)
                     /locus_tag="VKX24_02765"
                     /inference="COORDINATES: protein motif:HMM:NF026092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HLJ07429.1"
                     /translation="MTLVEGPAFCISGRTGNMHASFPEGLFYRDTRFLSEMELRVNGH
                     VPEPLAATTTDPFSASFVLRDHPLRGRADSHLVIFRHRYVGRGMREDVVVCNFGEEPA
                     FCAIELSLNCDFADLFEVKEGRIERTGDLRLESDRARMTFSYRRGGFRRSTFVDFSTV
                     PKINGNIASYELIIPARGQWSTCLQVTPVIDATPVEPRYRCEVPVDRATPVERLAAWR
                     RQLPIMACDHDAFGALLNRSTEDLAALRIFDPDHPDRAVVAAGAPWFMTLFGRDSLIT
                     SWMALLVDPDLALGTLQTLARFQGKDVDPRTEEEPGRILHEMRFGEAASLSLDGGDLY
                     YGTADATPLFVMLLGELRRWGLAREIVDQLLPHADAAMDWIVNFGDRDGDGYVEYQRA
                     "
     gene            1123..2055
                     /gene="sufC"
                     /locus_tag="VKX24_02770"
     CDS             1123..2055
                     /gene="sufC"
                     /locus_tag="VKX24_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HLJ07430.1"
                     /translation="MLPVRPEMQKAGPSTSVTVPLVPSDGLADDVHGLVTASQDSNGN
                     FHYRRSGIRMKTMSEPVLVIEDLQAGTGGAAPILRGVSLTVAAGEVHVLMGPNGSGKS
                     TLAKTLLASPNYEVTSGRVLFKGEDITALSTEERAQRGLFLGFQHPEEFAGVTVLNFL
                     RQAMSARKGFDMSVLEVRLALMDWMKRLSVDPKFMDRYLNDGFSGGEKKRSEVLQLAL
                     LEPDMAILDETDSGLDIDALRVVSEGINEVRRERPEMGVLLITHYQRILRYLTPDVVH
                     IFVGGRIVESGGLEIAERLEGEGYEAFRGAEVSP"
     gene            2075..>2306
                     /locus_tag="VKX24_02775"
     CDS             2075..>2306
                     /locus_tag="VKX24_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018032770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLJ07431.1"
                     /translation="MSTIHAPGPLARLQADFPILGRRVNGKRLVYLDSAATAQKPQAV
                     LDALNDYYEQRNANVHRGVYTLAEEATAAYEEA"
BASE COUNT          371 a          774 c          835 g          326 t
ORIGIN      
        1 gcccgctggt actcgacgta gccgtcgccg tcccggtcgc cgaagttgac gatccagtcc
       61 atcgccgcat cggcgtgggg caggagctgg tcgacgatct cccgggccag gccccaccgg
      121 cgcaactcgc cgagcagcat gacgaacagg ggggtggcgt cggcagtccc gtagtacagg
      181 tcgccgccgt cgaggctgag cgacgccgcc tccccgaagc gcatctcgtg gaggatgcgc
      241 ccgggctcct cctcggtccg cggatcgacg tccttgccct ggaagcgggc cagggtctgc
      301 agcgtgccga gggccaggtc ggggtcgacg agcagcgcca tccagctggt gatgagcgag
      361 tcccgcccga acagcgtcat gaaccagggc gccccggcgg ccacgacggc ccggtcgggg
      421 tggtcggggt cgaagatccg gagggcggcg aggtcctccg tcgagcggtt cagcagggcg
      481 ccgaaggcgt cgtggtcgca ggccatgatc ggcagctgcc ggcgccaggc ggccagccgc
      541 tccaccggcg tggcccggtc gaccggcacc tcgcagcggt agcggggctc gaccggcgtg
      601 gcatcgatga ccggcgtgac ctggaggcag gtcgaccact ggccccgggc ggggatgatc
      661 agctcgtagg aggcgatgtt gccgttgatc ttggggacgg tcgagaagtc gacgaaggtg
      721 gaccggcgga acccgccccg ccggtaggag aacgtcatcc gggcccggtc gctctccagc
      781 cggaggtcgc cggtgcgctc gatgcggccc tccttgacct cgaaaaggtc ggcgaagtca
      841 cagttcagcg acagctcgat ggcgcagaac gcgggctcct cgccgaagtt gcagacgacg
      901 acgtcctccc gcatgccccg gcccacgtag cggtgccgga agatgacgag gtgggagtcg
      961 gcccggcccc ggagcgggtg gtcgcggagc acgaaggagg cggagaaggg gtccgtggtg
     1021 gtggccgcca gcggctcggg gacgtgcccg ttgacccgca gctccatctc ggacaggaag
     1081 cgggtgtcgc ggtagaagag gccctcgggg aacgaggcgt gcatgttgcc cgtccgcccc
     1141 gagatgcaga aggcgggccc ctcgaccagc gtcacggttc cgctggtccc gagcgacggg
     1201 ctggccgacg acgtccacgg gctcgtcacg gcgagtcaag atagcaacgg gaatttccac
     1261 taccgccgta gtggaattag aatgaagacc atgtctgagc ccgtcctcgt catcgaagac
     1321 ctccaggccg gcaccggcgg agccgccccg atcctgcgcg gcgtttcgct gacggtcgcc
     1381 gcgggcgagg tccacgtgct catggggccg aacggctccg gcaagtcgac gctggccaag
     1441 acgctgctgg ccagccccaa ctacgaggtc acctcgggcc gggtgctgtt caagggggag
     1501 gacatcaccg ccctgtcgac cgaggagcgg gcccagcggg gcctcttcct cggcttccag
     1561 caccccgagg agttcgccgg ggtcaccgtc ctcaacttcc tgcgccaggc catgtcggcc
     1621 cgcaagggct tcgacatgtc ggtgctcgag gtgcgcctgg cgctgatgga ctggatgaag
     1681 cgcctctcgg tcgaccccaa gttcatggac cgctacctga acgacggctt ctccggcggg
     1741 gagaagaagc gctccgaggt gctgcagctg gcgctgctgg agcccgacat ggccatcctc
     1801 gacgagaccg actccgggct cgacatcgac gccctgcggg tggtgtccga ggggatcaac
     1861 gaggtgcgcc gggagcggcc ggagatgggc gtgctgctga tcacccacta ccagcggatc
     1921 ctgcgctacc tcacgcccga cgtcgtgcat atctttgtgg gagggcgcat cgtcgagtcg
     1981 gggggcctcg aaatcgccga gcgtctggaa ggggagggct acgaagcctt ccggggggcc
     2041 gaagtttcac cgtgagccgg agcgcgagca cgtcatgagc accatccacg ccccggggcc
     2101 gctggctcgg ctccaggctg atttcccgat cctcggccgc cgcgtcaacg gcaagcggct
     2161 ggtctacctc gactcggcgg ccacggccca gaagccccag gccgttctcg acgcgctcaa
     2221 cgactactac gagcagcgca acgccaacgt ccaccggggc gtgtacacgc tggccgagga
     2281 ggccaccgcc gcctacgagg aggccc
//
LOCUS       DATGJT010000161         2654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_644847, whole genome shotgun sequence.
ACCESSION   DATGJT010000161 DATGJT010000000
VERSION     DATGJT010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644847"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1303)
                     /gene="murF"
                     /locus_tag="VKX24_02780"
     CDS             complement(<1..1303)
                     /gene="murF"
                     /locus_tag="VKX24_02780"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HLJ07432.1"
                     /translation="MEWAAAASCWASLAAAGARWLRVAQREHYLPGSASRFAARWWLG
                     IRGNLLLLVAGGVATGLSWPFPLVGLGPAAIGAGAPVGLSVRGRTSALRWTRRLRTLG
                     GVWLALEAGLVLLGDAVGRIVFLSALGVLLAPVLVDLACVLTLPLEDWLGSRHVSRAA
                     ARLRSVRPKVVAITGSYGKTTTKNYVAHLLEGSFSVVASPASFNNRAGLARAVNEQLV
                     QGTEVFVAEMGTYGPGEIAELCSWCPPDISVITAIGPVHLERFGSEDAILRAKSEIVA
                     GARIVVLNADDARLATLADELAGRQSAPRVIRCSSRDVTCDVYVGGRDQYEVAFAGAR
                     LEAGLSLDPGVQPTNLACALGVAWALGVPPQALAPRLTDLPSVPHRLSVGKAASGVIV
                     IDDTFNSNPAGTRAALDVLRKVAKSDRRAVVTPGMVELGPRQ"
     gene            complement(1327..2022)
                     /locus_tag="VKX24_02785"
     CDS             complement(1327..2022)
                     /locus_tag="VKX24_02785"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ07433.1"
                     /translation="MLALHGWARSHRDFARVLSPAEGTPLDAVALDLPGFGAAPPPPE
                     PWGSRDYAALVAEILPEMDRPVVILGHSFGGRVAIQLASERPGDVAGLVLTGVPLRRA
                     NPAARPALRFRLARRLHTLGLVSEPRMEALRQRFGSSDYRAAQGVMRPVLVRVVNEHY
                     EDVLSALRCPVNLVWGEDDHVAPLEIARAVAEQLGDAPITVVPGAGHMTPLTAPDVLR
                     AAVLERVASRTAG"
     gene            2303..>2654
                     /locus_tag="VKX24_02790"
     CDS             2303..>2654
                     /locus_tag="VKX24_02790"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HLJ07434.1"
                     /translation="MAAPTPAGSWDRLTATQREAVLAEDPVLAVVAAAGSGKTGVLTA
                     RVVRRCQDGTAAASRSLVCTFSRKAADELRLRLWRLGVGGVRAGTIHRLALRVVAEWC
                     DHRSDPAPAVLGDRR"
BASE COUNT          404 a          958 c          986 g          306 t
ORIGIN      
        1 gttggcgcgg gcccagctcc accatgcccg gggtgacgac ggcgcggcga tcgctcttcg
       61 cgaccttccg cagtacatcg agggccgccc gggtcccggc cgggttggag ttgaaggtgt
      121 cgtcgatgac gatgaccccg ctcgctgcct tgccgaccga gagacggtgc gggacggacg
      181 gcaggtcggt gaggcggggt gcaagcgcct gaggggggac tccgagcgcc cacgcgaccc
      241 ccagggcaca ggccaggttg gtgggctgca cccccggatc cagcgacaag ccggcctcga
      301 gccgtgcccc ggcgaacgcc acctcgtact ggtcccgacc gccgacgtag acgtcacagg
      361 tgacgtcccg actcgagcac cggatgactc ggggcgctga ctgccggcca gcgagctcgt
      421 cggcgagggt ggccaagcga gcgtcgtccg cgttcaacac gacgatccgg gcaccggcca
      481 cgatctccga cttcgcccgc aggattgcgt cctcggagcc gaagcgctcc aggtgaacgg
      541 ggccgatggc cgtgatcacg gagatgtccg gggggcacca cgagcagagc tcggcgatct
      601 cgcccggccc gtacgtgccc atctcggcga cgaagacctc ggtgccctgg accagctgtt
      661 cgttgaccgc ccgggccagt ccggctcggt tgttgaacga agcggggctg gcgacgaccg
      721 agaagctccc ctcgagcagg tgggccacgt agttcttggt cgtcgtcttg ccgtatgagc
      781 cggtgatcgc gacgaccttg gggcgcaccg agcgcagtcg cgccgcggcc cgggacacgt
      841 gacgggaccc cagccagtcc tccaacggca gggtgaggac gcaggcgaga tcgacgagga
      901 ccggggcgag gagcacgccc aaggccgaga ggaacacaat cctgccgacg gcgtcgccca
      961 gcagaacgag gccggcctcc agtgccaacc acacgccgcc gagggtgcgg agcctgcggg
     1021 tccaccgcaa cgcagaggtc cggccccgaa ccgagagccc gaccggcgcc cctgcgccga
     1081 tcgcggccgg cccgagcccc accagcggga agggccagga gaggccggtc gcgacgcccc
     1141 cggcgaccag caacaggagg ttgccgcgga taccgagcca ccagcgagcg gcgaaacggg
     1201 aggccgaccc cggcaggtag tgctcccgtt gggcgacgcg gagccaccga gcgcccgcgg
     1261 cggccaggct tgcccagcag gatgcggccg cggcccattc catgccgccg agcccacgca
     1321 cggaggtcag cccgccgtcc gggaggcgac ccgctcgagc accgcggcac ggaggacgtc
     1381 gggtgcagtc agcggggtca tgtggcccgc ccctgggacc acggtgatcg gagcgtcccc
     1441 cagttgttcg gccaccgctc gagcgatctc caagggggcc acgtggtcgt cttcgcccca
     1501 cacgaggttc accgggcagc gcagcgccga cagcacgtcc tcgtagtgct cgttgacgac
     1561 gcgcacgagg acggggcgca tcaccccctg cgccgcccgg tagtcggacg agccgaaacg
     1621 ctggcgcagc gcctccatcc tcggttcgga gaccagaccg agtgtgtgca acctccgggc
     1681 gagccggaac cggagcgctg gccgagccgc cgggttcgct cgcctgagcg ggacaccggt
     1741 cagcacgagc ccggcgacgt cccccggcct ctcggacgcc aactggatgg cgacccgacc
     1801 gccgaaggag tgcccgagga tgacgaccgg gcggtccatc tcgggcagga tttctgcgac
     1861 caacgcggcg tagtcgcgac tcccccacgg ctcgggcggc ggcggcgccg cgccgaaccc
     1921 gggcagatcg agggcgacgg catcgagggg cgtcccctcg gccggtgaga ggacccgggc
     1981 gaagtcgcgg tgcgagcgcg cccagccgtg gagcgcgagc acggtgggcg gtaaggtccc
     2041 ggtccgctcc ccgatcaacc gtccgccggc gaaggagccg agcacgtcag cgaccgggcc
     2101 cggcgaccga cggtgggttc gatcccgacg agcggcgggg ctgcacccgc tctcgtcgca
     2161 tgcgtcggcg ccacggatcc atccgaccgg caccataccg ggacgctgcg ggccgtccag
     2221 gcgacccggg ggcgggccgc catccggggc cggtggtccc cggggatgtc ccaccccccc
     2281 gttacggtgg ccgccgatag ccatggctgc tccgacaccg gctggaagct gggaccggct
     2341 cacggcgacc cagcgggagg ccgtgctggc cgaggacccg gtgctcgccg tcgtggccgc
     2401 agcgggctcg ggcaagacgg gggtgcttac cgccagggta gtccgccgtt gccaggacgg
     2461 gacggccgcg gccagccgga gcctggtctg cacgttcagc cggaaggccg ccgacgagct
     2521 cagactccgg ctgtggcgcc tcggggtcgg cggggtgcgg gccgggacca tccaccggct
     2581 cgccctccgg gtggtggccg agtggtgcga ccaccgctcc gatccggctc ccgcagtgct
     2641 gggagaccgt cggc
//
LOCUS       DATGJT010000162         2331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_126605, whole genome shotgun sequence.
ACCESSION   DATGJT010000162 DATGJT010000000
VERSION     DATGJT010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126605"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..830
                     /locus_tag="VKX24_02795"
     CDS             66..830
                     /locus_tag="VKX24_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006236535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLJ07435.1"
                     /translation="MIHVAAVGDIHFGPDAAGTLRPHFEHLPERADVLLLAGDLTRVG
                     APDEARALADELDGVGVPVVAVLGNHDYHCDRADEVTRLLEGVGVTVLEGDSVVLPVN
                     GSTVGVAGTKGFGGGFVGACGSEFGEPEMKAFMAHSRCLADRLEQALTGLDTDVKVAL
                     LHYAPCPDTLAGERLEIYPFLGCYLLGEAADRGGATLTVHGHAHRGSERGLTAGGHHV
                     RNVAQPVIGHAYRLFCLGADGAGADPECAAPALTGA"
     gene            complement(843..>2331)
                     /locus_tag="VKX24_02800"
     CDS             complement(843..>2331)
                     /locus_tag="VKX24_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019873520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HLJ07436.1"
                     /translation="ARTPEPAGRVRRRPPAGTQRFVVQRHRARRLHYDLRLEIGGVLA
                     SWAVPKGPTLDPKARRLAVHVEDHPLDYFDFEGVIPEGYGAGDVIVWDWGTWEPAEDE
                     KDPERAVADGELHFDLHGEKLRGRFVLVRTKTNAEGKESWLLLHKHDEAAEAGWDPEE
                     HPASVKTGRTNDDLRPNKAPGKDPKKERTAAPKKADDGAARPPRPLRFTNLEKVLFPA
                     RPGEAPVTKGEFVRYHAEIAPTMLRYLADRPVNMHRYPNGADKPGFWHKAVPDHAPAW
                     MTRWRNDEADPGETECYFVLDSPEALAWVANFGALELHPWTSTVRDPHAPTWALIDLD
                     PGEKTTWDELLLLARLHRTALGHLGVEARPKVTGRRGIQIWVPVTGGRYTFDDTRAWV
                     EKLSRTIGSLVPELVSWAWQKRDRDGRARLDYTQNAINKTLVAPYSTRPAPGAPVSVP
                     LEWDELDDPDLRPDRWTIRTVFDRLADAGDPLAPLVGMAQELPEL"
BASE COUNT          276 a          855 c          860 g          340 t
ORIGIN      
        1 gcgacgacga cgatcgacca ccttcccgag ccgccggcca ccgccgagga actgggagcg
       61 gaccgatgat ccacgtcgcc gccgtggggg acatccactt cggcccggac gccgccggga
      121 ccctgcggcc ccacttcgag caccttcccg agcgggccga cgtgctgctc ctggccgggg
      181 acctcacccg ggtcggagcg ccggacgagg cccgggcgct ggccgacgag ctggacggcg
      241 tcggcgtccc cgtcgtcgcc gtcctcggca accacgacta ccactgcgac cgggccgacg
      301 aggtgacgcg cctcctggag ggcgtcggcg tcaccgtgct ggagggcgac tccgtcgtcc
      361 tgccggtcaa cggatcgacg gtcggcgtgg cggggaccaa gggcttcggc ggcggcttcg
      421 tcggcgcctg cgggtcggag ttcggcgagc cggagatgaa ggccttcatg gcccactccc
      481 gctgcctcgc cgaccgtctg gagcaggccc tgaccgggct cgacaccgac gtcaaggtgg
      541 cgctgctgca ctacgccccc tgccccgaca ccctggccgg cgaacggctg gagatctacc
      601 cgttcctcgg ctgctatctg ctcggcgagg cggccgaccg gggcggcgcc acgctcaccg
      661 tccacggcca cgcccatcgg gggtcggagc gggggctgac cgccggcggc caccacgtcc
      721 gcaatgtggc ccagccggtg atcggccacg cctaccggct cttctgcctg ggggccgacg
      781 gcgccggcgc cgacccggag tgcgccgctc cggcgctgac cggcgcctga ccgccgcccc
      841 cgttacagct cgggcagttc ctgggccatt ccgaccagcg gcgccagggg atcgccggcg
      901 tccgccaggc ggtcgaatac cgtccggatc gtccagcggt cggggcggag gtcggggtcg
      961 tcgagctcgt cccactccag cggcaccgac accggcgccc ccggcgccgg ccgggtgctg
     1021 tacggcgcca ccagcgtctt gttgatggcg ttctgggtgt agtcgagccg ggcccggccg
     1081 tcgcggtccc gcttctgcca cgcccagctc accagctccg gcaccagcga gccgatcgtg
     1141 cgggacagct tctccaccca ggctcgggtg tcgtcgaacg tgtagcgccc cccggtcacc
     1201 gggacccaga tctggatgcc gcgccggccg gtgaccttcg ggcgggcctc gacgccgagg
     1261 tgcccgagcg ccgtgcggtg gaggcgggcc agcagcagca gctcgtccca ggtcgtcttc
     1321 tcaccggggt cgaggtcgat cagcgcccag gtcggagcgt gggggtcgcg caccgtcgac
     1381 gtccaggggt ggagctcgag ggcgccgaag ttcgccaccc aggccagcgc ctccggggag
     1441 tcgagcacga agtagcactc ggtctccccc gggtcggcct cgtcgttgcg ccaccgggtc
     1501 atccaggccg gggcgtggtc gggcaccgcc ttgtgccaga accccggctt gtcggcaccg
     1561 ttgggatagc ggtgcatgtt gaccggccgg tcggccaggt agcgcagcat cgtcggggcg
     1621 atctcggcgt ggtagcggac gaactcgcct ttggtgacgg gcgcctcgcc cggccgggcg
     1681 gggaacagga ccttctcgag attggtgaag cgcagcggcc ggggcggacg ggcggcgccg
     1741 tcatcggctt tttttggcgc agcggtccgc tccttcttcg ggtccttccc cggtgcctta
     1801 ttcgggcgga ggtcgtcgtt ggtccggccg gtcttcaccg aggccgggtg ctcctccgga
     1861 tcccagcccg cctcggccgc ctcgtcgtgc ttgtggagca gcagccagga ctccttgcct
     1921 tcggcgttgg tcttggtccg gacgaggacg aagcggcccc gcagcttctc gccgtggagg
     1981 tcgaagtgga gctcgccgtc ggccacggcc cgctcgggat ccttctcgtc ctcggccggc
     2041 tcccacgtgc cccagtccca gacgatcacg tcgccggcgc cgtagccctc ggggatcacg
     2101 ccctcgaagt cgaagtagtc gagcgggtgg tcctcgacgt gcacggccag ccggcgggcc
     2161 ttgggatcga gcgtcgggcc cttggggacg gcccagctgg ccaggacgcc gccgatctcg
     2221 agccggaggt cgtagtgcag gcggcgggcc cggtgccgct ggaccacgaa acgctgcgtc
     2281 ccggccgggg ggcgccgccg gacccggccc gccggctcgg gggtgcgggc g
//
LOCUS       DATGJT010000163         2917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_436720, whole genome shotgun sequence.
ACCESSION   DATGJT010000163 DATGJT010000000
VERSION     DATGJT010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436720"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VKX24_02805"
     CDS             <1..766
                     /locus_tag="VKX24_02805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018793612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HLJ07437.1"
                     /translation="DLPDKIEMHVLCNLTREQASLYRAVVDDMLDRIETAKTGIERMG
                     VISGSMMKLKQVCNHPAHFLADGSRLDGSRSGKLARLEEVLEEVTAAGERALVFTQFA
                     EMGTLLQAHLSELLAVEVPFLYGGVVKRRREEMVDAFQSDGGPPVLVLTLKAGGVGLN
                     LTAANHVVHYDRWWNPAVEDQATDRVFRIGQQRDVQVRKFVCVGTLEERIDAMIEAKR
                     GLAERIVGSGEARLSDLSLSELRDLVALSDDAVAEG"
     gene            complement(770..964)
                     /locus_tag="VKX24_02810"
     CDS             complement(770..964)
                     /locus_tag="VKX24_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018654719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BldC family transcriptional regulator"
                     /protein_id="HLJ07438.1"
                     /translation="MAPAERNDLLTPAEVAVLFRVNPKTVTRWARAGKISAIRTLGGH
                     RRFRRDEIEAVLRSEEALGL"
     gene            1140..1505
                     /locus_tag="VKX24_02815"
     CDS             1140..1505
                     /locus_tag="VKX24_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07439.1"
                     /translation="MTASLAPKRHDTTSPLTCCPRCHKAELLGRLQRRPVFRYDKVDP
                     ADGPSIYALYHGNEHVATVRRRGVSGPPAYEVCVMSHDGNQDLLAGNLRDARALAEET
                     YTTSWREGAHIARGPVREI"
     gene            1514..1813
                     /locus_tag="VKX24_02820"
     CDS             1514..1813
                     /locus_tag="VKX24_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07440.1"
                     /translation="MRRTDPWSRARQATEEMERHLAAIARLADQRALAIQELLDQGLT
                     RSDVARGLGVTPAVITKILKRPVVGDTSDAEEHHGRPDVCAAAPSRRTVHPGVRR"
     gene            1931..2575
                     /locus_tag="VKX24_02825"
     CDS             1931..2575
                     /locus_tag="VKX24_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015304297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1345 domain-containing protein"
                     /protein_id="HLJ07441.1"
                     /translation="MAGDTEPASAAARVGVAASSGMAAAVGSALWMPWQVAVLAGWDL
                     SAAVFLAWIWGSIARCSGATTEALATREDSSRAVADLTLVGASVACLVGVGFTLLKAA
                     NSRGAAAALLVALAVVSVVASWAVVHTVFTLRYARLYYTAPEGGIDFNQDGRPDFADF
                     AYVAFTIGMTYQVSDTNLTTRPVRRTALRHALLSFLFGTFIVAMTINVVAGLLK"
     gene            2572..>2917
                     /locus_tag="VKX24_02830"
     CDS             2572..>2917
                     /locus_tag="VKX24_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013882769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3048 domain-containing protein"
                     /protein_id="HLJ07442.1"
                     /translation="MNGDRPRRRSRRAALCAVAVLVAPVALVAGPPPAARAAAPSAPD
                     PAGPSPLTGIAGSAPNRPALVVKIDNAPAARPQTGLNQADVVFEELVEGRMTRFAAVF
                     HSQDSAPVGPVRS"
BASE COUNT          388 a         1094 c         1028 g          407 t
ORIGIN      
        1 cgacctcccc gacaagatcg agatgcacgt gctgtgcaac ctcacccggg agcaggccag
       61 cctctaccgg gcggtggtcg acgacatgct cgaccggatc gagacggcga agaccggcat
      121 cgaacggatg ggggtcatct ccggctccat gatgaagctg aagcaggtct gcaaccaccc
      181 cgcccacttc ctggccgacg gctcacggct cgacggcagc cgctccggca agctggcccg
      241 gctggaggag gtcctcgagg aggtcaccgc cgccggcgag cgggccctcg tcttcaccca
      301 gttcgccgag atggggacgc tgctccaggc ccacctgagc gagctgctcg ccgtcgaggt
      361 gccgttcctt tacggtggag tggtgaaacg gcgccgggag gagatggtcg acgccttcca
      421 gtcggacggg gggccgccgg tcctcgtcct cacgctcaag gccggcggcg tgggcctcaa
      481 cctgaccgcc gccaaccacg tggtccatta cgaccgctgg tggaacccgg cggtggagga
      541 ccaggcgacc gaccgggtgt tccggatcgg tcagcagcgc gacgtgcagg tccgcaagtt
      601 cgtctgcgtc ggcacgctcg aggagcgcat cgacgccatg atcgaggcga agcggggact
      661 cgccgagcgg atcgtcggct ccggtgaagc gcggctcagc gatctctcgc tctccgagct
      721 gcgcgacctc gtggcgctct ccgacgacgc cgtcgccgaa ggctgaccgt cagaggccga
      781 gggcctcctc ggaccgcagg accgcctcga tctcgtcgcg gcggaagcgg cggtgtccgc
      841 cgagggtccg gatggcggag atcttgcccg cccgggccca gcgcgtcacc gtcttcgggt
      901 tgacccggaa cagcaccgcc acctcggcgg gggtcagcag gtcgttgcgc tcagcggggg
      961 ccatgacgtc tccgatcaga gggggttctg cccctcggta tcggctcggg ccgaatcggc
     1021 ctgaatagcc cggacgggcc attttttgcg ccgtgccccc cagcgggagt cctacccggc
     1081 gaccggcctc cgccggcgac cggggcccgt tttaccctag ggcgcgctat ggtggggtga
     1141 tgacggcttc actcgcgccc aaacgacacg acacgaccag cccgctgacc tgctgtcccc
     1201 gttgccacaa ggccgagctc ctcgggcggc tgcagcggcg cccggtgttc cgctacgaca
     1261 aggtcgaccc ggccgacggg ccgtcgatct acgccctgta ccacggcaac gagcacgtgg
     1321 ccaccgtccg ccgccggggc gtgtccgggc ctccggccta cgaggtctgc gtgatgtccc
     1381 acgacgggaa ccaggacctg ctggccggca acctgcgcga cgcccgggcc ctcgccgagg
     1441 agacgtacac gacctcgtgg agggaaggcg cccacatcgc ccgggggccg gtgcgggaga
     1501 tctgagcgcc accatgcggc gcacggatcc ctggagccgg gcccgccagg cgacggagga
     1561 gatggagcgg cacctggccg ccatcgcccg tctggccgac cagcgggccc tcgccatcca
     1621 ggagctgctc gaccaggggc tgacccggtc cgacgtcgcc cggggcctcg gggtgacccc
     1681 ggccgtcatc accaagatcc tcaagcggcc ggtggtgggg gacacctccg acgccgaaga
     1741 gcaccacggc cgcccggacg tctgcgccgc tgcgccgtcc cggcggaccg tccaccccgg
     1801 cgtccgccgc tgacgcggcc gggttccgtc tcctcgccct cgacgggggc gtcgcgcccc
     1861 tccatcaccc cggcgccggt ccggctggcc tagggtcgtt tccggagccc ggcgcagaac
     1921 gaggggatgg atggcaggcg acacggagcc ggcgagcgcc gccgcccggg tgggcgtcgc
     1981 ggcgtcgtcg ggcatggccg cggcggtcgg atcggcgttg tggatgccat ggcaggtggc
     2041 ggtgctggcc gggtgggacc tctccgccgc ggtgttcctc gcctggatct ggggaagcat
     2101 cgcccgctgc agcggtgcaa cgaccgaggc gctggccacc cgggaggact ccagccgggc
     2161 ggtggccgac ctcacgctcg tcggcgccag cgtcgcctgc ctggtcggcg tgggcttcac
     2221 gctgctcaag gccgccaaca gccggggtgc ggcggccgcc ctcctggtcg ccctggcggt
     2281 ggtgagcgtg gtggcgtcct gggcggtcgt ccacaccgtc ttcacgctgc gctacgcccg
     2341 gctgtactac accgctcccg agggaggcat cgacttcaac caggacgggc ggccggactt
     2401 cgccgacttc gcctacgtgg ccttcaccat cggcatgacc taccaggtct ccgacaccaa
     2461 cctgacgacc cggcccgtcc gccggaccgc gctgcgccac gccctgctct cgttcctgtt
     2521 cgggaccttc atcgtggcca tgaccatcaa cgtcgtggcc ggtctgctca agtgaacggc
     2581 gaccgccccc ggcggcggag ccggcgagcc gccctgtgcg ccgtcgccgt cctcgtcgcc
     2641 ccggtcgcgc tggtcgccgg accgccaccg gcggcccgcg ccgccgcccc gtcggcgccg
     2701 gacccggccg ggccgtcgcc gctgaccggc atcgccgggt cggcgccgaa ccggccggcg
     2761 ctcgtcgtca agatcgacaa cgcccccgcc gcccggcccc agaccggcct caatcaggcc
     2821 gacgtcgtct tcgaggagct cgtcgagggg cgcatgaccc gcttcgccgc cgtgttccac
     2881 tcccaggatt cggcgccggt cggcccggtc cgctccg
//
LOCUS       DATGJT010000164         3323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_22285, whole genome shotgun sequence.
ACCESSION   DATGJT010000164 DATGJT010000000
VERSION     DATGJT010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22285"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VKX24_02835"
     CDS             complement(<1..256)
                     /locus_tag="VKX24_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006541056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07443.1"
                     /translation="MAETPSRPGDSAVRVALLYPELLGTYGDRGNARVLVQRLAWRGL
                     PAELVEAPWGERAPASCDVYVLGGGEDSPQASAAAALIAEG"
     gene            complement(249..1520)
                     /locus_tag="VKX24_02840"
     CDS             complement(249..1520)
                     /locus_tag="VKX24_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013130729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurT ligase domain-containing protein"
                     /protein_id="HLJ07444.1"
                     /translation="MERTASVKALKAVVTGIGAVSRLTGRGGGAVIGGKVALTLDKAA
                     LVKLAAGRSLYLVSGTNGKTTTTALLAAALGTAGPVVTNMTGANLKPGLVSALARDLE
                     SPVAVLEVDEAALVQVLADTTASVVVLLNLSRDQLDRYGEVRLAAQKWRTSLGARPEI
                     HVVANCDDPLVVWAARAAGSVTWVSTGQRWRIDATSCPNCGGRIVWARGLGGVPRQRA
                     AGAATAGDDWKCSCGLARPEPEIEGGGDDVVVGPRSFPVQLQLPGRCNAANAAMAVAA
                     ARMAGVDPESALAAMVGIANVAGRYREVSLGPARARLLLAKNPAGWNEILDFLAAPPA
                     GVVVAVNARGPDGYDTSWLWDVDFERLEGRPVIAAGERALDVAVRLRYAGVPHEVCPD
                     PLAAARRLPPGKVELVANYTAFQTVLGAVGG"
     gene            1612..1881
                     /locus_tag="VKX24_02845"
     CDS             1612..1881
                     /locus_tag="VKX24_02845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07445.1"
                     /translation="MASEKQTQAARRNIKKAAAAAKNKRTLAHLPKKTKTALGKQAAA
                     VRRRNRRGGTAPKTKTELYEIAKKRNLPGRSKMGRDELAEALGEE"
     gene            complement(1886..3286)
                     /locus_tag="VKX24_02850"
     CDS             complement(1886..3286)
                     /locus_tag="VKX24_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019973112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ07446.1"
                     /translation="MFFRQYELGCLSLFSYLIGDETTGRAVVVDPQRDISQYLADAEA
                     QGLTIERVIETHFHADFLSGHLEMAAATGAAISYGEAAKTEFPMEPLADGQRLSLGEV
                     VLEVRATPGHTPESISVVVHERDGEEPWGVLTGDTLFIGDVGRPDLLSSAGVTAEELA
                     RSLYRSLHEKLLTLPDGVRVFPAHGAGSACGKNLSTATQSTIGEQRLTNYALQPMSED
                     AFVEAVTTGQAVAPPYFGFAARANRSEHELLDDREAPRLLDVDEVLGWLDRGAVLIDG
                     RPASEFACGHLRGAVNVGLEGRFAEYAGDVARPDQPIILVTEPGKEPEAKVRLARIGF
                     DHVVGAVGDVQRLLAERPDLAVPALRISASDFAGWEETDGPVQLVDVRNPGERERGVI
                     PGARLIPLAALLGRIDELDPTVTTVVYCAGGYRSIIAASALTARGFPLVADMLGGFDA
                     WKAAGFPIESPAAVGR"
BASE COUNT          474 a         1241 c         1211 g          397 t
ORIGIN      
        1 cgccctcggc gatgagggcg gcggcggccg acgcctgcgg gctgtcctcc ccgccgccga
       61 ggacgtagac gtcgcacgac gccggcgccc gctcgcccca cggcgcctcg acgagctccg
      121 ccggcaggcc ccgccaggcc aggcgctgga cgaggacgcg ggcgttgccc cggtcgccgt
      181 acgtgccgag gagttcgggg tacagcagcg cgacccgaac ggcgctgtcg ccggggcgcg
      241 acggcgtctc agccaccgac cgctccgagg acggtctgga aggcggtgta gttggccacc
      301 agctccacct tgcccggcgg cagccgccgg gcggccgcca gcgggtcggg gcacacctcg
      361 tgggggacgc cggcatagcg gagccggacg gcgacgtcga gggcccgctc gccggcagcg
      421 atcaccggcc ggccctccag cctttcgaag tcgacgtccc acagccacga cgtgtcgtag
      481 ccgtcggggc cccgggcgtt gacggccacc accaccccgg ccggcggggc ggccaggaag
      541 tcgaggatct cgttccaccc ggccgggttc ttggccagca gcaggcgggc gcgggccggg
      601 ccgaggctca cctcgcggta gcgtccggcg acgttggcga tgcccaccat ggcggccagg
      661 gcgctctcgg ggtcgacgcc ggccatccgg gcggcggcca cggccatggc ggcattggcg
      721 gcgttgcacc ggccgggcag ctgcagctgc accgggaacg accgcggccc gacgaccacg
      781 tcgtctccgc cgccctcgat ctccggctcc ggacgggcca ggccgcagga gcacttccaa
      841 tcgtcaccgg ccgtggcggc tcccgccgcc ctttgtcggg ggacaccccc gagcccccgg
      901 gcccacacga tccgcccgcc gcagttgggg cagctggtgg cgtcgatccg ccagcgctgg
      961 ccggtcgaga cccaggtgac cgagcccgcc gcccgggcgg cccagaccac cagcgggtcg
     1021 tcgcagttgg ccacgacgtg gatctcgggc cgggcgccga gcgacgtccg ccacttctgg
     1081 gccgccagcc gcacctcgcc gtagcggtcg agctgatcgc ggctcaggtt gaggaggacg
     1141 acgacggagg ccgtcgtgtc ggccagcacc tgcaccagcg ccgcctcgtc gacctccagc
     1201 accgccaccg gcgattcgag atcacgggcg agggcgctga ccagcccggg cttcaggttg
     1261 gcgccggtca tgttggtcac caccggccct gccgtcccga gggccgcggc cagcagcgca
     1321 gtggtcgtcg tcttcccgtt ggttcccgac accaggtaca gcgaccgccc ggcggccagc
     1381 ttgaccagcg ccgccttgtc cagagtcagc gccaccttcc cgccgatgac cgcgccgccg
     1441 ccccggccgg tgaggcgcga caccgccccg atacccgtca ccaccgcctt gagggccttc
     1501 accgacgccg tccgctccat ccccggcatc gtagaaccgt tgtccggcaa ggagggtgac
     1561 ggagccgggc acctgggtac gttcaggtgg aggacagcaa cggaggtgcc catggccagc
     1621 gagaagcaga cccaggcggc gcggcgcaac atcaagaaag cggcggccgc ggccaagaac
     1681 aagcggaccc tcgctcacct gcccaagaag acgaagaccg ccctcggaaa gcaggcggcg
     1741 gccgtccggc ggcgcaaccg ccgcggcggc acagcgccga agaccaagac cgaactctac
     1801 gagatcgcca agaagcgcaa cctgcccggc cggtcgaaga tgggccgcga cgaactcgcc
     1861 gaggccctcg gcgaggagta gccgttcagc ggccgacggc cgccggcgac tcgatgggga
     1921 agccggcggc cttccaggcg tcgaagccgc cgagcatgtc ggccaccagc gggaaacccc
     1981 gggcggtgag ggccgaggcc gcgatgatgc tgcggtaccc gccggcgcag tagacgacgg
     2041 tcgtcaccgt cgggtcgagc tcgtcgatcc ggcccagcag cgccgccagc gggatcaggc
     2101 gggcgccggg gatcacgccc cgctcccgct ccccggggtt gcggacgtcg accaattgca
     2161 ccggcccgtc ggtctcctcc cagccggcga agtcggaggc ggagatgcgc agcgccggca
     2221 ccgccaggtc gggtcgctcc gccagcagcc gctgcacgtc gccgacggcg ccgacgacgt
     2281 ggtcgaagcc gatgcgggcc aggcggacct tggcctccgg ctccttgccg ggctcggtga
     2341 cgaggatgat cggctggtcg ggacgggcga cgtcgccggc gtactcggcg aagcggccct
     2401 cgagccccac gttgacggcg ccgcggagat ggccgcaggc gaactccgac gccgggcgcc
     2461 cgtcgatgag gacggcgccg cggtcgagcc atccgaggac ctcgtcgacg tcgagcagcc
     2521 ggggcgcctc ccggtcgtcg agcagctcgt gctccgaccg gttggcccgg gcggcgaagc
     2581 cgaagtacgg cggcgccacg gcctgcccgg tggtcaccgc ctcgacgaag gcgtcctcgc
     2641 tcatcggctg cagggcgtag ttggtcagcc gctgctcgcc gatggtcgac tgcgtggccg
     2701 tcgacaggtt cttgccgcag gccgatccgg cgccgtgggc ggggaagacc cgcacgccgt
     2761 cgggcagcgt gaggagcttc tcgtgcaggg accggtagag cgaccgggcc agctcctcgg
     2821 cggtgacgcc cgccgacgac agcaggtcgg ggcggccgac gtcgccgatg aacagcgtgt
     2881 cgccggtcag cacgccccac ggctcctcgc cgtcgcgctc gtggaccacc acgctgatcg
     2941 actccggggt gtgccccggc gtggcccgca cctcgaggac gacctcgccg agcgagagcc
     3001 gctgcccgtc ggccagcggc tccatcggga actccgtctt cgccgcctcg ccgtagctga
     3061 tggccgctcc ggtggcggcg gccatctcca ggtggccgga gaggaagtcg gcgtggaagt
     3121 gggtctcgat gacccgctcg atcgtcaggc cctgcgcctc ggcgtcggcc aggtactggg
     3181 agatgtcgcg ctgggggtcg acgaccacgg cccggccggt cgtctcgtcg ccgatcaggt
     3241 agctgaacag cgacaggcat ccgagttcgt actgccggaa gaacatctcg tacctcctcc
     3301 agggctctac aggccgccga ggc
//
LOCUS       DATGJT010000165         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_436903, whole genome shotgun sequence.
ACCESSION   DATGJT010000165 DATGJT010000000
VERSION     DATGJT010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436903"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..1248)
                     /locus_tag="VKX24_02855"
     CDS             complement(184..1248)
                     /locus_tag="VKX24_02855"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ07447.1"
                     /translation="MSFWPVQPLDPATCSDDDLAGLHALEAALETEALPGEPVAPLEH
                     TVAELRHGNPFLVRKGWVVRHGDAGSPIAARASCSFIDVPENRHHAHVTVDVHAAVRG
                     LGIGSALLARAVDAARRWHCTVLDFEARVGGPGEPFLRRLGAERRLVERRSRCRTADI
                     DRARLEGWVRRAGERAAGYSLLRWTGRCPDDVLADFLMLKGVMNTAPLEALDWDDERI
                     TPDQWRLKEAAREGRGIEAWTVCARHDESRDLAGYTEIHLPGTWPEMAWQGDTGVWPK
                     HRDRGLGRWLKAVMALRLLDERPGVRHIETWNAGSNEAMLSINVAMGFRPLENWGDWQ
                     IPTAAAAAALRRRGRRLEAS"
     gene            1384..>2092
                     /locus_tag="VKX24_02860"
     CDS             1384..>2092
                     /locus_tag="VKX24_02860"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HLJ07448.1"
                     /translation="MQQDQSSAPLRRVQPARRKWPWPLDLYQSAVGKKWAMAWSGVIL
                     LGFVFFHMVGNLKAYLGPVPMNHYAEWLRDMAVPALPRTVALWIIRSVLIAAFVVHMH
                     AAYVLTRMNHRARPAKYATERDYIAANWASRTMRWTGVIVILFVFFHLADLTWGTANG
                     DFVRGSVYHNMAHSFSRVPVAVIYIVANLALALHIFHGAWSLFASLGVSNPRIVRFRR
                     SFATAFAAVILIGNVSFP"
BASE COUNT          288 a          767 c          721 g          316 t
ORIGIN      
        1 ggcgtgtctc ccgggtgttc atcgccgagg gacccggtta cttcaagaag gacctgacgc
       61 ccgaggacgt ccgcgacaac tgggacgccg tccgggccga ggccgactac gtgatcccga
      121 ccagcgccaa caacgagatc gcgctcatca tgccgttcct gagcgacgcc gaatagcggc
      181 gcgctacgac gcctcgagcc gccggccccg ccgtcgcagg gcggcggcgg ccgcggccgt
      241 cgggatctgc cagtcgcccc agttctccag cgggcggaag cccatggcga cgttgatcga
      301 cagcatcgcc tcgttgctgc cggcgttcca cgtctcgatg tggcggacgc cggggcgttc
      361 gtcgaggagc cggagggcca tcaccgcctt gagccaccgg ccgagacccc ggtcccggtg
      421 cttcggccag acgccggtgt cgccctgcca ggccatctcg ggccacgtgc cggggaggtg
      481 gatctcggtg tagccggcca ggtcgcggct ctcgtcgtgg cgggcgcaca ccgtccacgc
      541 ctcgatcccg cgtccttccc gggccgcctc cttcaggcgc cactggtcgg gtgtgatccg
      601 ctcgtcgtcc cagtcgaggg cctcgagggg ggcggtgttc atgacgccct tcagcatgag
      661 gaagtcggcc agcacgtcgt cggggcagcg ccccgtccag cggagcagcg agtacccggc
      721 cgcccgctcg ccggcccgcc ggacccagcc ttccagccgc gcccggtcga tgtcggcggt
      781 gcggcagcgg ctgcggcgtt cgacgaggcg gcgttcggcg ccgagccggc ggaggaacgg
      841 ctcgcccggc ccgccgaccc gggcctcgaa gtcgaggacg gtgcagtgcc agcgccgggc
      901 ggcgtcgacc gcccgggcca ggagcgccga gccgatcccg aggccccgca ccgccgcgtg
      961 gacgtcgacc gtcacgtggg cgtggtggcg gttctccggc acgtcgatga aggagcacga
     1021 ggcgcgagcg gcgatggggc tcccggcgtc gccgtggcgg acgacccagc ccttccgcac
     1081 caggaacggg tttccgtggc ggagttcggc caccgtgtgc tcgagcggcg cgaccggctc
     1141 gcccgggagg gcctcggttt cgagggcggc ctccagggcg tgcagaccgg ccaggtcgtc
     1201 gtcggaacag gtggccggat cgagcggttg tacgggccag aagctcatgc caccgagtgt
     1261 cacaaagtcg ccgcggccgc tgccactgaa tttcctggtt ccgggatcga cagaacgccg
     1321 caggtaccat cggtgcaggc cagcacggcc gaaaatgtgg tccggagggc acccgtggat
     1381 ctgatgcagc aggatcagag cagcgctccg ctccgccggg tgcagcccgc ccggcgcaag
     1441 tggccgtggc cgctcgacct gtaccagtcg gcggtcggca agaagtgggc gatggcctgg
     1501 agcggcgtga tcctgctcgg cttcgtcttc ttccacatgg tcggcaacct caaggcctac
     1561 ctcgggcccg tgccgatgaa ccactacgcc gagtggctcc gggacatggc cgtccccgcc
     1621 ctgccccgga cggtggcgct gtggatcatc cggtcggtgc tgatcgccgc cttcgtggtc
     1681 cacatgcacg ccgcctacgt cctcacccgg atgaaccacc gggcccgtcc ggcgaagtac
     1741 gccaccgagc gcgactacat cgccgccaac tgggccagcc ggacaatgcg gtggacgggc
     1801 gtcatcgtca tcctcttcgt cttcttccac ctcgccgacc tgacgtgggg gacggccaac
     1861 ggcgatttcg tccgggggag cgtgtaccac aacatggccc acagcttctc ccgggtgccg
     1921 gtggcggtga tctacatcgt cgccaacctc gccctggccc tccacatctt ccacggcgcc
     1981 tggagcctct tcgccagcct cggcgtctcg aacccccgca tcgtccgctt ccggcgcagc
     2041 ttcgccaccg ccttcgccgc cgtcatcctg atcggcaacg tctccttccc ga
//
LOCUS       DATGJT010000166         4002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_542021, whole genome shotgun sequence.
ACCESSION   DATGJT010000166 DATGJT010000000
VERSION     DATGJT010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4002
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542021"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VKX24_02865"
     CDS             complement(<1..345)
                     /locus_tag="VKX24_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020509871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07449.1"
                     /translation="MRIRRPALLALSLALVLAVPAACSKPGRSAQERSGAVKTPGSDP
                     AVTAPSQGPGATAPAGAPGVSAADDWLTYHHDAGRTGVAGDQAPLGTVKKAWTSPALD
                     GKVYGQPLVAGDA"
     gene            431..2218
                     /locus_tag="VKX24_02870"
     CDS             431..2218
                     /locus_tag="VKX24_02870"
                     /inference="COORDINATES: protein motif:HMM:NF025114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HLJ07450.1"
                     /translation="MPAGTGSDAAYDLVVVGGNSGGLSVAIAAQSGGLGRVRILEPSS
                     AVAYTDLIGEHQLDVGFGETVESIDVAPGDKLEITTTKGVYRARSCVVAHRTNVGNSV
                     WTPPIDAALSERVIVDRFSGQLVDQDILIVGHSDHAVEMASKAAMNGARVVLAAGGMI
                     PKRLSPIGQRMLRRLERERMATILFRSVPQRITEDDGLPLACFGDRRTPDLEFDKVVF
                     ASGRTPVKPDDVGLTEAAAASGRVWLLGLPTSDEDGAPVLTAAAVLPEVARLFPTLEA
                     YLEAEAEAARRDGGRSFAVIEELRKEHYNATIIYFEPTHSDLWVLGVKPDHGDVGHLP
                     GQYASLGLGFWEDRIDEAEDPGLEERWDKLVRRSYSISHRIFDEYGYLAQERDTTELE
                     FYIVLVPPTPENIPGLTPRLALKRPGDRIYLGPKVAGRYTLGPVTDPRGTVVFFATGT
                     GEAPHNAMIVELLRKGHMGPIVSAVTVRNLADLGYIDKHRELESRYANFHYLPLPTRE
                     PGIPKRYIQDLITDDVFEKEYGVTLDPATTHVFMCGNPAMIGLPKEDEETGALTYPKP
                     TGVVEILTERGFTLDHRNKRGNLHFEEYW"
     gene            complement(2315..3304)
                     /locus_tag="VKX24_02875"
     CDS             complement(2315..3304)
                     /locus_tag="VKX24_02875"
                     /inference="COORDINATES: protein motif:HMM:NF019436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ07451.1"
                     /translation="MTGERGSRGAGGAAGQALSVLNGMLGDLLEDRQSSLAIPMSFRC
                     DGAELRLDREALAEELPGATGSVCLFVPGLMGTDAVWRFPGPAGATYGSRLAADRNVT
                     PVFLSYNSGRHVSGNGRQLALLLHALVAAWPVELEELSLVGHSMGGLVVRSACHYGAL
                     EGCPWVEKVRRVFLLGAPLSGAPLEKLVHVADFTLTTIWNPVTRFIGRALRRRSAGIK
                     DLRFGALVEEDWSGHDPDELRWPRRQPVPLLRTADHYVIAGSLAGRIDHPAARVLGDP
                     LVTFFSATGQTLAGRRATPFRESHVRNLPKLGHLALAHDDTVYEQMLAWWNTP"
     gene            complement(3540..>4002)
                     /locus_tag="VKX24_02880"
     CDS             complement(3540..>4002)
                     /locus_tag="VKX24_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HLJ07452.1"
                     /translation="LYRPSGRLVQVSLPERRYDLAARLMAEALEDPEGDPAAAVDRAA
                     RRFGETIGAQARRRLGGRPSANRLLEGTCDVLREYGFEPVRIEDDIRLRNCPFDAIAK
                     DHTDLVCGMNLALAEGLVAGLGADGIDVRLDPMPGTCCVALTAPGRKRRSS"
BASE COUNT          591 a         1438 c         1425 g          548 t
ORIGIN      
        1 cgcgtcgccg gcgacgaggg gctggccgta gaccttgccg tcgagggccg gcgacgtcca
       61 cgccttcttg accgtgccca gcggcgcctg gtcgccggcc acgccggtgc gaccggcgtc
      121 gtggtggtag gtcagccagt cgtcggcggc ggagacgccc ggtgcgccgg ccggcgccgt
      181 ggccccgggc ccctggctcg gcgccgtgac ggccgggtcg ctgcccgggg tcttcacggc
      241 ccccgaccgt tcctgggccg acctcccggg cttcgagcag gcggccggga cggcgaggac
      301 gagggccagt gacagggcca ggagagcggg ccgccggatc cgcatcccca cgaccgtacc
      361 ccgtccggag tgggccggtg gcccccgcct cccttaacct ttcccggcga cagggaagac
      421 gggagcggcc atgccggcgg gtacgggaag cgacgccgcc tacgacctgg tggtcgtggg
      481 cgggaactcg ggtggtttgt cggtggccat cgctgctcag agcggcgggc tcggccgggt
      541 gcggatcctg gagccgtcgt cggcggtggc ctacaccgat ctgatcggcg agcaccagct
      601 cgacgtgggc ttcggcgaga cggtcgagtc gatcgacgtc gcgcccggcg acaagctcga
      661 gatcacgacg accaagggcg tctaccgggc ccggtcgtgc gtggtggcgc accgcaccaa
      721 cgtcggcaac tccgtgtgga cgccgccgat cgacgccgcg ctgtcggagc gcgtcatcgt
      781 cgaccggttc tccggtcaac tggtcgacca ggacatcctc atcgtcgggc actccgacca
      841 cgccgtcgag atggcgtcga aggccgccat gaacggcgcc cgggtcgtgc tggccgccgg
      901 agggatgatt cccaagcgcc tctcccccat cggccagcgg atgctgcgcc ggctggagcg
      961 ggaacggatg gccaccatcc tcttccgctc cgttccgcaa cggatcaccg aggacgacgg
     1021 gctgccgctg gcctgcttcg gcgaccgccg cacgcccgac ctggagttcg acaaggtggt
     1081 cttcgcctcc ggccgcacgc cggtgaaacc cgacgacgtc gggctgaccg aggccgccgc
     1141 ggcctcgggc cgggtgtggc tcctcggcct gccgacctcc gacgaggacg gcgcgccggt
     1201 cctgaccgcc gccgccgtgc tgcccgaggt ggcccggctc ttcccgacgc tcgaggccta
     1261 tctcgaggcc gaggcggagg ccgcgcggcg cgacggcggc cggagcttcg ccgtcatcga
     1321 ggaactccgc aaggagcact acaacgccac catcatctac ttcgagccga cgcactccga
     1381 cctctgggtg ctcggcgtga agcccgacca cggcgacgtc ggtcacctgc cgggccagta
     1441 cgcctccctc ggcctcgggt tctgggagga ccgcatcgac gaagccgagg accccggcct
     1501 cgaggagcgg tgggacaagc tcgtgcgccg ctcctactcc atctcccacc ggatcttcga
     1561 cgagtacggc tacctggccc aggagcgcga caccaccgag ctcgagttct acatcgtgct
     1621 cgtgccgccc acgcccgaaa acatccccgg gctcacaccg cgcctggcgc tgaaacgccc
     1681 cggcgaccgc atctacctcg gcccgaaagt ggccgggcgc tataccctcg ggccggtcac
     1741 cgacccccgg ggcacggtcg tgttcttcgc caccggcacc ggggaagcgc cgcacaacgc
     1801 catgatcgtc gagctcctcc ggaagggtca catggggccg atcgtgtcgg ccgtcaccgt
     1861 ccgcaacctg gccgacctcg gctacatcga caagcaccgc gagctcgagt cccgctacgc
     1921 caacttccac tacctcccgc tcccgacccg cgagcccgga atcccgaagc gctacatcca
     1981 ggacctgatc accgacgacg tgttcgagaa ggagtacggc gtcactctcg atccggccac
     2041 gacccacgtc ttcatgtgcg gcaaccccgc catgatcggc ctccccaagg aggacgagga
     2101 gaccggagcg ctgacgtacc cgaagcccac cggcgtcgtc gagatcctga ccgaacgggg
     2161 cttcacgctc gaccaccgca acaagcgggg caacctgcac ttcgaggagt actggtagtc
     2221 ccgggatctt tccgccggtc ggggcgctcg gtggcagtgg ggcgcttcgg cgttccggac
     2281 gaacaccccc gttcgggaac gtcgggttgt cgcgtcaggg cgtgttccac catgccagca
     2341 tctgctcgta cacggtgtcg tcgtgggcga gggcgaggtg accgagcttc ggtaggttcc
     2401 gcacgtgcga ctcgcggaag ggggtcgcac gccgtccggc cagggtctgg cccgtggcgc
     2461 tgaagaacgt caccagggga tcgccgagga cccgggcggc ggggtggtcg attcgaccgg
     2521 cgagggagcc ggcgatcacg tagtggtcgg cggttcggag gaggggaacc ggctggcggc
     2581 ggggccagcg gagctcgtcg ggatcgtggc ccgaccagtc ctcctccacg agtgccccga
     2641 accggaggtc tttgatcccg gcgctccggc gccgcagggc ccgtccgatg aagcgggtga
     2701 cagggttcca gatggtggtg agcgtgaagt cggcgacgtg gacgagcttc tccagcggcg
     2761 ctccggacag cggagcgccg agcaggaaca cccggcgcac cttctccacc cacgggcatc
     2821 cctcgagggc tccgtagtgg caggcgctac ggacgacgag gccgcccatg ctgtggccga
     2881 cgaggctcag ctcttcgagc tccaccggcc aggcggcgac cagcgcgtgg agcaggaggg
     2941 ccagttgccg cccgttgccg gagacgtggc gccccgagtt gtagctgagg aagacagggg
     3001 tgacgttccg gtcggcggcc aaccgggagc cataggtcgc cccggccggt cccggaaaac
     3061 gccatacggc gtcggtgccc atgagcccgg gcacgaacag acacaccgag cccgtggccc
     3121 ccgggagctc ctcagcgagg gcctcccggt cgaggcggag ctcggcgccg tcacatctga
     3181 agctcatcgg gatggccagg ctcgactgcc gatcctcgag caggtcgccg agcatcccgt
     3241 tcagcacgct gagggcttgg cccgcggcgc cgccggcacc acgactccct cgctcccccg
     3301 tcatcgactc ggatcctaat gagccgcggg cggggtccca gcttctcggc agaattggtg
     3361 gcggttctgc gggacgagtc ctgcccagaa cccgggacgg agaataagac agcggcgatc
     3421 gacgcctcgt accgctctac cggggggcgc gaccggtcac actggcacag gtgttcacgg
     3481 ccgtcaacgc cgggcgagcg ccaccggtcg cggtgcccgg gggccactcg gggtcgaggt
     3541 cagctggacc gccgcttgcg gccgggggcc gtcagcgcca cgcaacaggt gccgggcatg
     3601 ggatcgaggc ggacgtcgat gccgtcggcg ccgagcccgg cgaccaggcc ctcggcgagg
     3661 gcgaggttca tcccgcagac gaggtcggtg tggtccttgg cgatggcgtc gaaggggcag
     3721 ttgcggaggc ggatgtcgtc ctcgatgcgg acgggttcga acccgtactc ccgcaggacg
     3781 tcacaggtcc cctccagcag ccggttggcg ctcggccgcc cgccgagccg gcggcgggcc
     3841 tgggccccga tcgtctcccc gaaccggcgg gccgcccggt ccacggcggc cgccggatcg
     3901 ccctccggat cctcgagcgc ctcggccatc agccgagcgg cgaggtcgta gcgccgctcc
     3961 gggaggctga cctgcaccag ccggcccgac gggcggtaga gc
//
LOCUS       DATGJT010000167         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_542072, whole genome shotgun sequence.
ACCESSION   DATGJT010000167 DATGJT010000000
VERSION     DATGJT010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542072"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VKX24_02885"
     CDS             complement(<1..630)
                     /locus_tag="VKX24_02885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07453.1"
                     /translation="MRRNSWCGLGVVLGLLLAAGGSPLVAAAAPARPAPARFEFGLFG
                     NQRRTDAERARFPQLVAAMNGADLAFSVADGGLGAAPRDCNDDAALAARDLLDRFRAP
                     LVFTPGQADWLDCRAGDGPGARLGALRRIFFAADRSAGRETMDVERQRPYFPENARWN
                     EGPVTFATIHVVGESDGLGRGRDVDAQVAARHNAATAWLNGTFDEAERRS"
     gene            730..855
                     /locus_tag="VKX24_02890"
     CDS             730..855
                     /locus_tag="VKX24_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07454.1"
                     /translation="MLAASGLRKRYGEVTALDGVDPTVAAAAAAIVGESEAFRSP"
     gene            883..1803
                     /locus_tag="VKX24_02895"
     CDS             883..1803
                     /locus_tag="VKX24_02895"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HLJ07455.1"
                     /translation="MSSSGHRDSGPIALIGAGSVGCMLAGHLAEAGWDIVVCGRTPLD
                     RVVVTIDGATVEHKVDWAAQPGELPPLRHAVLATKIHHTPDVADWLAALPAGSAVLAA
                     QNGVDHRPRIEPLTAAAVVPTLVYPNAERTGPGRVRVRRTGRGLVVPDDEAGRAAAAL
                     FAGSGIDVEASADFATAAWEKLLFNVMANPLTALTGRPIEVLHEPAMADLGLALALEA
                     VAVARAEGTAVTPEHARVALDWLLGLPGAAPSSMLQDRGAGRRMEHVGLLGPVVALGR
                     RHGVPTPLTGAMLALLDALPVGRIDDPHGG"
     gene            1793..>2344
                     /locus_tag="VKX24_02900"
     CDS             1793..>2344
                     /locus_tag="VKX24_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013153041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HLJ07456.1"
                     /translation="MGAEAGGVLGRLAGGLPAPAVVTDPDVMDRFVHDEAEWAPFGKP
                     VAVVRPRTTAEVAEAVSACAATATPLVTRGAGTGLSGGANAVDGCVVLSTELMTGIRS
                     VDPANQIAVVEPGVINDDLRRAVAAEGLWYPPDPASYQISTIGGNVATNAGGLCCLKY
                     GVTRDYVLALEVVLASGTVVRLGS"
BASE COUNT          276 a          860 c          921 g          287 t
ORIGIN      
        1 gctgcggcgc tccgcctcgt cgaaggtgcc gttcagccag gcggtggcgg cgttgtggcg
       61 ggcggcgacc tgggcgtcga cgtcgcggcc ccggccgagc ccgtccgact cgcccaccac
      121 gtggatggtg gcgaaggtga ccggcccctc gttccagcgg gcgttctccg ggaagtacgg
      181 gcgttgccgc tccacgtcca tggtctcccg gccggccgag cgatcggcgg cgaagaagat
      241 ccgccgcagg gcgccgaggc gggcgcccgg cccgtcgccg gcccggcagt cgagccagtc
      301 ggcctggccc ggggtgaaga ccagcggtgc ccggaagcgg tcgaggaggt cgcgggccgc
      361 cagggcggcg tcgtcgttgc agtcgcgggg cgcggcgccg aggccgccgt cggcgacgct
      421 gaaggcgagg tcggcgccgt tcatcgccgc aaccagctgc gggaaccggg cccgctcggc
      481 gtcggtgcgc cgctggttgc cgaacaggcc gaactcgaag cgggccgggg ccggacgggc
      541 gggcgcggcg gcggccacga gcggggagcc tccggccgcc agcagcagac cgagcacgac
      601 gcccaggccg caccacgagt tccgtctcac ggccggatcg aaccaccggc ccgggcccgg
      661 agccagggac caacgggcag acctttcccg aaggctgctc aattcccggg tgcggtaggg
      721 tccggcgccg tgctggcggc cagcgggctc cggaagcgct acggcgaggt cacggccctc
      781 gacggcgtcg acccgaccgt ggccgcggcc gcggccgcga tcgtgggaga gtcggaggcc
      841 ttccgctcgc cctgaagcgc tcccgtccgg cagagtgggg ccgtgagctc gagtggtcac
      901 cgggattccg gcccgatcgc cctcatcggg gccgggtcgg tcggctgcat gctggccggc
      961 cacctggcgg aggcggggtg ggacatcgtc gtctgcggcc gcaccccgct cgaccgggtg
     1021 gtcgtcacga tcgacggcgc gaccgtcgag cacaaggtcg actgggcggc gcagccgggc
     1081 gagctcccgc cgctgcgcca cgccgtgctg gcgacgaaga tccaccacac cccggacgtc
     1141 gccgactggc tggcggcgct gccggccggg agcgccgtcc tcgcggccca gaacggcgtc
     1201 gaccaccggc cgcgcatcga gccgttgacc gcggcggcgg tggtcccgac gctcgtctat
     1261 cccaacgccg agcggacggg cccgggacgg gtgcgggtcc gccggacggg ccgggggctc
     1321 gtcgtgcccg acgacgaggc cggccgggcg gcggcggcgc tcttcgccgg cagcggcatc
     1381 gacgtcgagg cgtcggcgga cttcgccact gccgcctggg agaagctgct cttcaacgtc
     1441 atggccaacc cgctcaccgc cctcaccggg cgcccgatcg aggtgcttca cgaaccggcg
     1501 atggccgatc tcggtctggc gctggccctg gaggccgtcg ccgtcgcccg ggccgagggg
     1561 acagcggtga cgcccgagca cgcccgggtc gcgctggact ggctgctcgg cctgcccggc
     1621 gccgcgccgt cgtcgatgct ccaggaccgc ggcgccggcc ggcggatgga acacgtcggc
     1681 ctcctcgggc cggtggtggc cctcggccgg cgccacgggg tgccgactcc gctgaccggc
     1741 gccatgctgg ccctgctcga cgccctcccc gtcggccgca tcgacgatcc ccatgggggc
     1801 tgaagccgga ggcgtgctcg ggcggctggc cggcgggctt ccggccccgg ccgtcgtcac
     1861 cgatcccgac gtcatggacc gcttcgtcca cgacgaggcg gagtgggcgc cgttcgggaa
     1921 gccggtggcc gtggtgcggc cccggacgac ggccgaggtg gccgaggcgg tgtcggcctg
     1981 cgccgccacg gcgacgccgc tcgtgacccg gggggcggga acggggctgt cgggcggggc
     2041 caatgccgtc gacggctgcg tcgtcctctc caccgagctc atgaccggca tccggtcggt
     2101 cgacccggcc aaccagatcg ccgtcgtcga accgggcgtc atcaacgacg acctccggcg
     2161 ggcggtggcc gccgaagggc tgtggtatcc gcccgacccg gccagctacc agatctcgac
     2221 catcggcggg aacgtggcca ccaacgccgg cggcctgtgc tgcctgaagt acggcgtgac
     2281 ccgggactac gtgctggcgc tggaggtggt gttggcgtcg gggaccgtcg tccggctcgg
     2341 gtcg
//
LOCUS       DATGJT010000168         3373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_542105, whole genome shotgun sequence.
ACCESSION   DATGJT010000168 DATGJT010000000
VERSION     DATGJT010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542105"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VKX24_02905"
     CDS             <1..886
                     /locus_tag="VKX24_02905"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07457.1"
                     /translation="LLSGGILLLALVSARAQAAFTARLRRHATTREIQPVMGYARPAL
                     EPPEVSVVDRPSIALVGQGIGVSFGGVRAVDLVDVRVGPGQRVAIMGSNGAGKTTLVN
                     ALSGFVPLSQGTVKLGGVDVTGLAPYARARAGLSRTFQLPRLAEVLTVRQNLEAWHGF
                     SPEMQDRAEWLMQHFWVSSVADVPVDMLSFGFRRRVELVRSLVCRPEVLLLDEPVGGL
                     EDEEVARLIDVILDLQDLEGWGLLVVEHNLDFVKGVADRLMVMQDGVLVAEGGVDEVW
                     DDDRVRRIYLGETMPAQV"
     gene            931..2124
                     /locus_tag="VKX24_02910"
     CDS             931..2124
                     /locus_tag="VKX24_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015304657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HLJ07458.1"
                     /translation="MSGRAVVVGGSLGGLSAGLWLRHAGWDVDVLERSPSPLEGRGAG
                     IVLHPATIRYLVEHGSADLAAISAPASWLRYLGDDGAVLSQAPCRYRFTSWTTLYRDL
                     LGHFGRQRYRMGTEVTAVESGRDAASAVTAAGERFDADLLVGADGVASTVRARLLPEV
                     QPTYAGYVGWRGTVAEDALSETTFAALHEAITYHLLPGSHILAYPIPDVGGTVTPGRR
                     LLNWVWYRNVRQGKDLDDLMTGTDGLRHWLSLPPGRVRPAHLADLRAACARLPAPLAE
                     AVGSTAEPFVQLIVDVAVPRMVFGRVCLLGDAAFALRPHAAVGTAKAAEDARQLARSL
                     RSVASGDVDRALASWEAAQLRLGGQAAARTCAAGNRSQFDGAWQVGEPLPFGLYEVGD
                     SALDP"
     gene            complement(2233..3249)
                     /locus_tag="VKX24_02915"
                     /pseudo
     CDS             complement(2233..3249)
                     /locus_tag="VKX24_02915"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
BASE COUNT          412 a         1211 c         1237 g          513 t
ORIGIN      
        1 cctgctctcg ggggggatcc tgttgctggc cctggtgtcg gcccgggccc aggccgcctt
       61 caccgcccgg ctgcggcggc acgccacgac ccgggagatc cagccggtga tgggctacgc
      121 ccgtccggcg ctggagccgc cggaggtctc ggtcgtcgac cgcccgtcga tcgcgctggt
      181 cggccagggc atcggcgtgt cgttcggcgg ggtgcgggcc gtcgacctcg tcgacgtgcg
      241 tgtcgggccc ggccagcggg tggcgatcat gggctccaac ggcgccggca agacgacgct
      301 ggtcaacgcc ctgtcggggt tcgtgccgct gtcccagggg acggtgaagc tgggcggcgt
      361 cgacgtcacc ggactggcgc cctacgcccg ggcccgggcc ggcctcagcc ggacgttcca
      421 gctgccccgc ctggccgagg ttctgaccgt gcgccagaac ctcgaggcct ggcacggctt
      481 ctcgcccgag atgcaggacc gggcggagtg gctgatgcag cacttctggg tgagctcggt
      541 ggccgacgtc cccgtcgaca tgctctcgtt cggcttccgc cgccgggtgg agctggtgcg
      601 ctcgctggtc tgccggcccg aagtcctgct gctcgacgaa ccggtcggcg gactggagga
      661 cgaggaggtc gcccggctca tcgacgtcat cctcgacctg caggacctcg aggggtgggg
      721 cctgctggtc gtcgagcaca acctcgactt cgtgaagggc gtggccgacc gcctcatggt
      781 catgcaggac ggcgtcctcg tcgccgaggg cggcgtcgac gaggtatggg acgacgaccg
      841 cgtccggcgc atctacctcg gcgagacgat gcccgcccag gtctgaaata ggctctccgc
      901 cgtggaggag cccgaagcag agccggagca ctgagcgggc gggcggtcgt cgtcggcggc
      961 tcgctcggcg ggctcagcgc cggattgtgg ctgcgccacg ccggctggga cgtcgacgtc
     1021 ctggagcggt cgccttcacc gctggagggc cggggggcgg gcatcgtcct ccacccggcg
     1081 acgatccgct acctcgtgga gcacggctcc gccgacctcg cggccatcag cgccccggcg
     1141 tcgtggctgc gctacctcgg cgacgacggg gcggtgctga gccaggcacc gtgccgctac
     1201 cggttcacgt cctggacgac gctctaccgc gacctgctgg ggcacttcgg ccgccagcgt
     1261 taccggatgg ggaccgaggt caccgccgtc gagtccggcc gcgacgcggc gagcgcggtc
     1321 acggcggccg gcgaacgctt tgacgccgac ctcctcgtcg gcgccgacgg cgtggcgtcc
     1381 accgtccggg cccggctcct gcccgaggtg cagccgacct atgccggcta cgtcggctgg
     1441 cggggcaccg tggccgagga cgccttgtcg gagacgacgt tcgccgccct ccacgaggcg
     1501 atcacctacc acctcctgcc ggggagccac atcctggcct acccgatccc cgacgtcggc
     1561 gggacggtca cgcccggccg gcggctgctc aactgggtct ggtaccgcaa cgtcaggcag
     1621 ggcaaggatc tcgacgacct gatgaccggg acggacggcc tgcgccactg gctctcgctc
     1681 ccgccgggcc gggtccgccc ggcccacctc gccgacctcc gggccgcctg cgcccgcctc
     1741 cctgcaccgt tggccgaagc ggtggggagc accgccgaac cgttcgtgca gctcatcgtc
     1801 gacgtcgccg tgccccgcat ggtcttcggc cgcgtctgcc tgctgggcga cgccgccttc
     1861 gccctccgcc cccacgccgc ggtggggacg gccaaggccg ccgaagacgc ccgccagctg
     1921 gcccggtcgc tccgctcagt cgcgagcgga gacgtcgacc gggccctggc gagctgggaa
     1981 gcagcccagt tacgtctggg cgggcaggcg gcggcccgca cgtgtgcggc cgggaaccgc
     2041 tcgcagttcg acggggcgtg gcaggtcggc gaacccctgc ccttcgggct ctacgaggtg
     2101 ggggacagcg ccctcgatcc ctgaccgccc gatccggggg gcggacgccg gcgccttccc
     2161 ggcgggcggg aagccggcgt gccagccggg ctggtccatg acccatttcc cgctcacgca
     2221 gcagcgggtg acgccgaccg aagtgacgcc ggtccggtcg ccggggccga aagtcggcgg
     2281 cgggaagtag ccggagtcat agccggtcat cttggtctcg aacgtcgact cgaagctctc
     2341 ccgggacagg ttcggccccg tccggcgcag cccttcgatg aagccctggg cgaggccgta
     2401 gtagaggagc atgaggtcgt cgtcctcggc gccggtgttc ggcgccttct ggtgcatcag
     2461 cgccgcgaag tgttgtcccc tcggcgtctc cagcgtcgtc gagctcgtca gcatccggat
     2521 cccctcggcc gctccgccgg tggcagtggc ggtggcgttg aagttccacg tcgtcccgac
     2581 gccggtccag atcggcttgt agccgagcgc ccgggcgtcg cgcagcatgc agatgctgcc
     2641 cagcggcccg ttcatgagga agacgagctc gacgccatgc gactgcatgt tggcgacctc
     2701 gttggcgcag gtcgtctggt cggtggcgat cggctgctcg aacacgacct tctcgccgag
     2761 cgacgccgcc ttggccttga aggcctcctt ggcggccttg gccgtgctcg tcccctcgta
     2821 gacgatcccg atcttcttgt tcccggcgcc gagcgtgttc tggatgaact cggccaggat
     2881 cggcgcctgg cgggcccagt aggccatcag cgagaagacg tggtgcgagt tcacggcgac
     2941 gtcgcggtcg atgttgccga cgatcgtcgg gaccttgtgc tggtcgacca gcggcgccag
     3001 gatcgtgtcg ctctcgctga ccagcgagac aaggccgaac gactcgccct gggcccgctt
     3061 ctcctccacc tggatcgtgc tggtgttgta gctgccgtcg tcgtaggtct tcagcatcag
     3121 ccggcggccg ttgatcgggc cggcctcgtc gaaggcggcc tgcatgaccg ccggggcgtt
     3181 gcggagcagc ccggcgtaga aaccggtctt ggcgtagaac agcccgacgt tgaccgtgtc
     3241 gcggcccacc ccggtggtgg tgccggggcc cgacggagcg gacggcggcg cgggcgtcgg
     3301 cgcgcccggc cccccggccg aggccgagcc ggacgggccg ttcccggcgg ccgccgagcg
     3361 ggccggcgac gcc
//
LOCUS       DATGJT010000169         3416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_127182, whole genome shotgun sequence.
ACCESSION   DATGJT010000169 DATGJT010000000
VERSION     DATGJT010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3416
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127182"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VKX24_02920"
     CDS             complement(<1..720)
                     /locus_tag="VKX24_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018310279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HLJ07459.1"
                     /translation="MARTITMREAINEALDQEMARDQSVILMGEDIVGGAGSPGEDDA
                     WGGVLGVTKGLYAKYGRERLLDTPLSESAYIGAAIGAATCGLRPVAELMFIDFMGVCF
                     DQIFNQAAKFRYMFGGKAETPVTIRCMVGAGFRAAAQHSQMLTPIFTHIPGLKVVCPS
                     TPYDTKGLLAASIRDNDPVIFCEHKAMYDTTGDVPLGSYTIPLGEAEVVREGADCTVV
                     AYGLMVHRAVEAADLLSTESIE"
     gene            complement(735..1718)
                     /locus_tag="VKX24_02925"
     CDS             complement(735..1718)
                     /locus_tag="VKX24_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009553434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HLJ07460.1"
                     /translation="MADNPFPLDRDRLLAAYRTMRTIREFEERLHVDFSRGDIPGFVH
                     LYAGEEASATGIMMHLRPTDRIASTHRGHGHCIAKGVDPRAMMKEIYGRKGGSCEGKG
                     GSMHIAELDVGMMGANGILGAGAPLACGAALAAKSRGQGDVAVSFVGDGASNQGMFLE
                     SLNLAAVWDLPAIFVVENNAYAESTSRTYGVAVESYVDRAGGFGIPGVSVDGTDFFAV
                     YEAAGEIIDRARRGGGPALLECEMVRFFGHFEGDAQTYRAPGEQDDLREHRNCLTRFR
                     AAVTETGVLSDAELDAVDAEARALIDEAVVQALAAPEPTPDDLLTDVYVSY"
     gene            complement(1711..2730)
                     /locus_tag="VKX24_02930"
     CDS             complement(1711..2730)
                     /locus_tag="VKX24_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011829202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HLJ07461.1"
                     /translation="MANPVSAHDIRRVIANATSLQIADRANIVLRVLAGLAAAGVPAV
                     AVMPDRKGITALLERNLARERRLGRSLPEVRILDMPVTSTVEDTLRATAAMVDAGVAA
                     IVVLGGDGTHRAVVRRCGKVPVAGLSTGTNNAFPEMREPTITGLATGLYASGAVPAEE
                     ALLPNKVLEVSVNDGERTDLALVDVVVSSERFVGARALWRTGHLHHLFVTFADPEAIG
                     MSAIAGLLRPVGRREPFGLRVVLDPTAASPTLRAPIAPGLIEPVAVSSAEPLRPDEAV
                     AVAHRGGVVALDGEREIELRPDDRLTVTLRCDAFRSVDVPRCMRAAALRGLFHHQPNE
                     RGPDG"
     gene            complement(2764..3138)
                     /locus_tag="VKX24_02935"
     CDS             complement(2764..3138)
                     /locus_tag="VKX24_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012948286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ07462.1"
                     /translation="MEVLQSRVLYRPVDYQASVAFYRDVVGLHVFREWATGTVFFLGG
                     GLLELSRPAGPVTDDKLSLWLHVRDVDAEFARLAAAGVDVVEAPVDEPWGLREARIRD
                     PDGLLLVLVEIPPSHPMRRGRD"
     gene            3158..>3416
                     /locus_tag="VKX24_02940"
     CDS             3158..>3416
                     /locus_tag="VKX24_02940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07463.1"
                     /translation="MTDWLAREAEGDLHQRFVEPEFDDTAWEPITVPGHWRSTPAFAD
                     SDGPVLYRHRFAAVPLPDGRRRFLTLEGVFYYGDVWLDGAYL"
BASE COUNT          480 a         1214 c         1240 g          482 t
ORIGIN      
        1 ctcgatgctc tcggtggaga gcaggtcggc ggcctccacg gcccggtgga ccatgaggcc
       61 gtaagcgacg accgtgcagt cggcgccctc ccggacgacc tccgcctccc ccagcgggat
      121 ggtgtacgac cctaagggga catcgccggt ggtgtcgtac atcgccttgt gctcgcagaa
      181 gatgacgggg tcgttgtcgc ggatagaggc ggccaggagg cctttggtgt cgtagggcgt
      241 cgacgggcac accaccttga ggccggggat gtgggtgaag atcggcgtga gcatctggct
      301 gtgctgggcc gcggcccgga agccggcgcc gaccatgcac cggatggtca ccggcgtctc
      361 cgccttgccg ccgaacatgt accggaactt ggccgcctgg ttgaagatct ggtcgaagca
      421 gacgcccatg aagtcgatga acatcagctc cgccaccggt cggaggccgc aggtggcggc
      481 gccgatggcg gccccgatgt aggccgattc ggacaggggc gtgtcgagca gccgttcccg
      541 cccgtacttg gcgtagagcc ccttggtgac gccgaggacg ccgccccagg cgtcgtcctc
      601 ccccgggctc ccggccccgc cgacgatgtc ctcgcccatg aggatcacgc tctggtcccg
      661 ggccatctcc tggtcgaggg cctcgttgat cgcttcgcgc atcgtgatcg tgcgtgccat
      721 ggcagttccc ccgatcagta ggagacgtag acgtcggtca gcaggtcgtc cggcgtcggc
      781 tcgggggcgg ccagggcttg gaccaccgcc tcgtcgatca gggcccgggc ctcggcgtcg
      841 acggcgtcga gctcggcgtc gctcagcaca ccggtctccg tgaccgcggc gcggaaccgc
      901 gtcaggcagt tccggtgctc ccggaggtcg tcctgctcgc cgggcgcccg gtaggtctgg
      961 gcgtcgccct cgaagtggcc gaagaagcgg accatctcgc actcgagcag cgccgggccg
     1021 ccgccccggc gggcccggtc gatgatctcg ccggccgcct cgtagacggc gaagaagtcg
     1081 gtcccgtcga cggagacgcc gggaatgccg aagccgcccg cccggtcgac gtaggactcg
     1141 accgcaacgc cgtaggtccg cgacgtcgat tcggcgtagg cgttgttctc gaccacgaag
     1201 atcgccggca ggtcccagac cgcggccagg ttgaggctct ccaggaacat gccctggttc
     1261 gaggcgccgt cgccgacgaa gctcacggcc acgtcgccct ggccccgcga cttggccgcc
     1321 agggcggcgc cgcaggccag cggagcgccg gcgccgagga tgccgttggc ccccatcatc
     1381 ccgacgtcga gctcggcgat gtgcatggag ccgcccttgc cctcgcagct cccgcccttg
     1441 cgcccgtaga tctccttcat catcgcccgg gggtcgacgc ccttggcgat gcagtggccg
     1501 tggccccggt gggtggaggc gatccggtcg gtcggccgga ggtgcatcat gatgccggtg
     1561 gcggaggcct cctcgccggc gtagaggtgc acgaagccgg ggatgtcacc ccgggagaag
     1621 tcgacgtgga ggcgttcctc gaactcacgg atcgtccgca tcgtccggta ggccgccagc
     1681 aggcggtcac ggtcgagcgg gaacgggttg tcagccatcg ggtcccctct cgttcggttg
     1741 gtggtggaac aggccccgga gcgcggccgc ccgcatgcac cgggggacgt cgacgctgcg
     1801 aaaggcgtcg caccgcaacg tgacggtcag gcgatcgtcg ggccgcagct cgatctcccg
     1861 ttcgccgtcg agagccacga caccgccgcg atgggcgacg gcgacggcct cgtcggggcg
     1921 gagcggctcg gcggacgaga cggcgacggg ctcgatcagc cccggggcga tcggcgcccg
     1981 cagggtcggg gacgccgcgg tggggtcgag cacgacccgc agcccgaacg gctcgcgccg
     2041 gccgaccggt cggagcaggc cggcgatggc cgacatgccg atggcctccg gatcggcgaa
     2101 ggtgacgaac aggtggtgga ggtggccggt ccgccacagg gcccgggcgc cgacgaaccg
     2161 ctcgctggac accaccacgt cgacgagggc caggtcggtg cgctcgccgt cgttcacgga
     2221 cacctcgagg accttgttcg gcagcagcgc ttcttcggcc gggaccgcac cgctggcgta
     2281 gagcccggtg gccagcccgg tgatcgtcgg ctcccgcatc tccgggaagg cgttgttcgt
     2341 cccggtcgag aggccggcca cgggcacctt gccgcagcgg cgcacgaccg cccggtgggt
     2401 cccgtcgccc ccgaggacga cgatggcggc cacgccggcg tccaccatcg ccgccgtcgc
     2461 ccgcagcgtg tcctcgaccg tgctcgtcac cggcatgtcg aggatgcgga cttcggggag
     2521 cgaccgcccg agccgccgtt cccgggccaa attccgttcc aggagggcgg tgatgccctt
     2581 ccggtcgggc atcaccgcca ccgccgggac cccggccgcc gccaggccgg ccaggacccg
     2641 cagcacgatg ttggcccggt cggcgatctg gaggctggtg gcgttggcga tcacccgccg
     2701 gatgtcgtgc gccgacacgg ggttcgccac cagaccgacc gtgaccactg cgggagtgtg
     2761 ccactagtcg cgaccccggc gcatggggtg gctcggcggg atctcgacca ggaccagcag
     2821 gagcccgtcg gggtcgcgga tccgggcctc ccgcaggccc cacggctcgt cgacgggcgc
     2881 ttcgacgacg tcgaccccgg cggcggccag gcgggcgaac tcggcgtcga cgtcccggac
     2941 gtggagccac agcgacagct tgtcgtcggt caccgggccg gccgggcggg agagctcgag
     3001 cagcccgccg ccgaggaaga acaccgttcc ggtggcccac tcccggaaga cgtggagccc
     3061 gacgacgtcg cggtagaagg cgaccgacgc ctggtagtcg acgggacggt acaggacgcg
     3121 gctctggagg acttccacgc cgtaaccttc tcacgcaatg accgactggc tggcccgtga
     3181 ggccgagggt gacctccacc agcgcttcgt cgagcccgaa ttcgacgaca ccgcctggga
     3241 gccgatcacc gtccccggcc actggcgcag cacgccggcc ttcgccgaca gcgacgggcc
     3301 tgtcctctac cggcaccgtt tcgccgccgt gccgctgccc gacgggcggc gccgcttcct
     3361 caccctggag ggcgtcttct actacggcga cgtgtggctc gacggcgcct acctcg
//
LOCUS       DATGJT010000170         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1060826, whole genome shotgun sequence.
ACCESSION   DATGJT010000170 DATGJT010000000
VERSION     DATGJT010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1060826"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..2010
                     /locus_tag="VKX24_02945"
     CDS             202..2010
                     /locus_tag="VKX24_02945"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ07464.1"
                     /translation="MSIDQRSRQGGAVTFDPDALRERYARERDKRLRPDGNEQYVEIA
                     GRFAPYLEDPYVAAAERAPRLDHVEVAVIGAGMAGLLAGARLKQAGVDDVRIIDKAGD
                     VGGTWYWNRYPGAQCDVESYIYLPLLEETGYIPTEKYAHAPEILAHCRRIAEQFGLYD
                     NACLSTEVTGVEWDAGRRRWAITTNRGDEMTAHFLVMGNGPLHRPKLPGIPGVGDFRG
                     HSFHTSRWDYGYTGGGPEGNLDRLADKRVGVIGTGATAVQAVPHLAEAAGHLFVFQRT
                     PSSIDVRANRPTDPEWAATLGPGWQRERMENFTVLTSGGLAETDLVMDGWTDIIGRLG
                     RQLREGGAAPLGGLGGAFELADFEKMEQIRARVDALVEDRRTAAALKPWYRQFCKRRC
                     FHDEYLQAFNRPNVFLVDTDGRGVDRITETGVVVGDHEYALDCLIFATGFEVGTEYTR
                     RSGYDVIGAGGTALSKHWAQGIRSLHGMLVHGFPNLFVLGHTQGGFTVNYPHLLDEAG
                     RHASHVVRYAIDHDVRELEVTAEAEAQWLETLAESARDVRAFQEQCTPGYYNNEGRPA
                     DGGFLGSSYGKGPLAFFQLLADWRADERFPGLELRR"
BASE COUNT          339 a          801 c          763 g          288 t
ORIGIN      
        1 actggctctt cgcctggacg tacaacggcc tggttccgca gaggaaactg ctcgcctcca
       61 tcgaggcctt cgccaccaag gtgctgcccc gcttcaccgg gtcgacgccg tgaggggggc
      121 ggaccggagg gtcgccgttg ctacgctcgg ccgcccagag cgtccgggcg acagcccgcg
      181 ggccgagacg aggaccgacc catgagcatc gaccagcgga gccggcaggg tggggcggtc
      241 accttcgacc ccgacgcgct gcgggagcgc tacgcgagag agcgcgacaa gcggctccgg
      301 ccggacggca acgagcagta cgtcgagatc gccggccgct tcgcccccta cctcgaggac
      361 ccctacgtgg ccgcggccga gcgcgcgccg cgcctcgacc acgtcgaggt ggccgtcatc
      421 ggggccggca tggccggcct gctcgccggg gcccggctca agcaggccgg agtggacgac
      481 gtccggatca tcgacaaggc cggcgacgtc ggcgggacct ggtactggaa ccggtacccg
      541 ggggcccagt gcgacgtcga gtcctacatc tacctgccgc tgctcgagga gaccggctac
      601 atcccgaccg agaagtacgc ccacgcgccc gagatcctgg cccactgccg ccgcatcgcc
      661 gagcagttcg gcctctacga caacgcctgc ctctccaccg aggtgaccgg cgtcgagtgg
      721 gacgccggcc gccgccgctg ggccataacg accaaccgcg gcgacgagat gacggcccac
      781 ttcctggtca tggggaacgg gccgctgcac cggccgaagc tcccggggat ccccggcgtc
      841 ggggacttca ggggccactc cttccacacc agccggtggg actacggcta caccggcggc
      901 gggccggagg ggaacctcga caggctggcg gacaagcggg tgggcgtcat cggcacgggc
      961 gccaccgcgg tgcaggccgt gccccacctg gcggaggcgg ccggccacct cttcgtgttc
     1021 caacgcacac cgtcctcgat cgacgtccgc gccaaccggc ccaccgaccc ggaatgggcg
     1081 gcgaccctcg ggcccggctg gcagcgcgag cgcatggaga acttcaccgt gctcacctcg
     1141 ggtgggctgg ccgagaccga cctcgtgatg gacggctgga ccgacatcat cgggcgcctg
     1201 ggacgccagc tgcgcgaggg cggtgctgcc ccgctgggcg gcctcggggg cgccttcgaa
     1261 ctggccgact tcgagaagat ggagcagatc cgggcccggg tcgacgccct ggtcgaggac
     1321 cggcggaccg ccgccgcgct caagccttgg taccgccagt tctgcaagcg tcggtgcttc
     1381 cacgacgagt acctccaggc cttcaaccgg cccaacgtct ttctcgtcga caccgacggc
     1441 cgcggcgtcg accggatcac cgagaccggc gtcgtggtcg gagaccacga gtacgccctg
     1501 gactgcctca tcttcgccac cggcttcgag gtcggcaccg agtacacgcg tcggtccggc
     1561 tacgacgtga tcggggcggg cgggacggcc ttgtcgaagc actgggccca ggggatacgc
     1621 tcgctgcacg gcatgttggt gcacgggttt cccaacctgt tcgtactcgg ccacacccag
     1681 ggcggcttca ccgtcaacta tccccacctg ctcgacgagg ccggccggca tgcgagccat
     1741 gtcgtccgct acgcaatcga ccacgacgtc cgtgagctcg aggtgaccgc cgaagccgag
     1801 gcgcagtggc tcgagacgct ggcggagtcc gcccgcgacg tacgcgcctt tcaggagcag
     1861 tgcacgcctg gctactacaa caacgaaggc aggcccgccg acggcgggtt cctgggcagc
     1921 tcctacggca agggcccgct cgccttcttc cagctcctcg ccgactggcg agccgacgag
     1981 cgcttccccg ggctggagct ccgccgctag cgcaatgctg gcccaggtga accaggcgct
     2041 acggcgggaa caccacttcc ccggcccggg cgagcatggt gcggcggtcc tcgtcgagga
     2101 cgaacccggc ggcgacggag gcgtcgagcg cctcctcgta ggcggcgcgg tacgcggcct
     2161 cgctgcggta gaggcgtcgc agcaccgcgc c
//
LOCUS       DATGJT010000171         5865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1162098, whole genome shotgun sequence.
ACCESSION   DATGJT010000171 DATGJT010000000
VERSION     DATGJT010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5865
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162098"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..752
                     /locus_tag="VKX24_02950"
     CDS             <1..752
                     /locus_tag="VKX24_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020576157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HLJ07465.1"
                     /translation="ALDRPGLLTDDMAELRSFQRPYARPAAEVAGWPRDPWRLTPPLS
                     GGHPPSPGPAAGGIGLAEVVRRVRPTILVGTSTRTGAFTEEVVRAMAAGCERPIILPL
                     SNPTRLAEATPADLLRWTDGRALVATGSPFEPVTLSDRVTYVIGQANNALVFPGLGLG
                     AIVARAARVTDGMIFAAAEAVAGLVDPSTPGASLLPQINDVRETSVAVAVAVAAAAAD
                     AGVARAPLEPDLEAQVRRTMWEPVYRPVRPA"
     gene            complement(840..1622)
                     /locus_tag="VKX24_02955"
     CDS             complement(840..1622)
                     /locus_tag="VKX24_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013830352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HLJ07466.1"
                     /translation="MPQAEGVRLERIGAAALIVIDRPQAGNAISRPTMAELDAVLDEV
                     AADPGVRVVAVRGQGEKIFVAGGDLKELAAIRTEAEAQAMALTMRTLLDRVASLPVPV
                     VAALNGHAFGGGCEVAVACDFRLAADDVKLAFNQVDLAIMPAWGGIERLQALVGRGRA
                     LYLLTTGLPVDAATAAAWGLVERVVPRAEFDDRLSELLERMTRAPREALAGIKAAADA
                     ARPAARPDLAGAATASFARTWVGDAHWAAVAAMEERRRSRSG"
     gene            complement(1609..2085)
                     /locus_tag="VKX24_02960"
     CDS             complement(1609..2085)
                     /locus_tag="VKX24_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008253559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HLJ07467.1"
                     /translation="MPPSADQPRRVLVAKPGLDGHDRGAKVVARALRDAGYEVIYTGI
                     RQKVAVIVEQALQEDVDLVGLSILSGAHLGLARQVVDCLRDNGLDDVKVVVGGTIPAS
                     DCRALLDLGVDAVFPTGTSIEAVVAGVDALWPGGMGGVPPTEAAAAARKEQDVAAG"
     gene            complement(2085..3683)
                     /locus_tag="VKX24_02965"
     CDS             complement(2085..3683)
                     /locus_tag="VKX24_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019069992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLJ07468.1"
                     /translation="MSQDEQPVSTESGIPVDALYSPANTELDYAGIGDPGAFPFTRGN
                     FPTGYRHKLWTFRQYSGFGTAAETNARYKYLLANGGTGLSVAADLPTQIGYDSDDPDV
                     TEEVGRVGVALDTLADAEVLFDGIPLDRVSTSWTVNGTAAIMLAFYIAVGKKQQVPIE
                     RLRGTMQNDILKEYVARGTWIWPPEPSIRLIVDTIEFCAQHVPRYNAISVAGAHFRDA
                     GCTAAQEMAFTLADGVTYVDAVLERGRMSIDEFAPQVSFFFYTHSDFFEEIAKYRAGR
                     RRWARLVKERWGAEKDSSCLFRMGCVAGGSTLYAPQPHNNIVRIAYEAMASVLGGVQS
                     MFTSAWDEPFALPTEESTTLALRTQQILAYETGVARTVDPLGGSWFVESLTDAMEEQL
                     VAIMADVDDHGGMVRAIEDGYVQGLIAEEAWKAQKAIEGGERPIVGVNVFRTEEPPAD
                     LQVYGLDADGRQRQLDRLAEVKRTRRGDDVRRVLKELQSAAEQPDVNLMPLLVEAVEA
                     YATVGEITQALRDTWGEYRQPVVF"
     gene            3841..4512
                     /locus_tag="VKX24_02970"
     CDS             3841..4512
                     /locus_tag="VKX24_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003874151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HLJ07469.1"
                     /translation="MGGTVRARAAEELRNRILTGALAAGTRLDLDALCAEFGASRTPV
                     REALLELSYEGLVEVAPRSGITVIGLTPRDVLDNFAILGTLAGKAAEWAAARITEPQL
                     DEIRRLARAVERGEDLVAANWAFHRAVHRASGSPRIVTLIRQTVGVVPTNFFDVFPDQ
                     GEHSAADHDELVAALAAGDGAAARLVAERHVTEAGVALARFLEGGARGRSRPAGRARS
                     RDRRS"
     gene            4574..5464
                     /locus_tag="VKX24_02975"
     CDS             4574..5464
                     /locus_tag="VKX24_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018422345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ07470.1"
                     /translation="MARIELRHPKNEDGDWFVDTRCIDCGTCRDVAPHLFGAVAGQSV
                     VRRQPDPASSAETTDAWLAAQACPTTSIGTRSRRRRPGRLYPFEIEPGSGVFDCGYCS
                     EDSFGASAWFVHRPAAEGGNLLIDSPRFTAALADPMAEMGGIAHILLTHRDDVADAAR
                     YAARFGARVWVHEDDRRAAPFATDVLRGTAGTEIAPGLVALPVPGHTRGSVVYLLDDR
                     YLFTGDSLAWSHDRADLTAFRGACWYSWPAQADSLERLAASGHRFAWVLPGHGARAHG
                     DPTELHDRLVGLVERMRRAA"
     gene            complement(5461..>5865)
                     /locus_tag="VKX24_02980"
     CDS             complement(5461..>5865)
                     /locus_tag="VKX24_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010982482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07471.1"
                     /translation="QVLRNEDDGKLFITFSADASWTQEYKVGLLEWTGGDVLDPASWR
                     KLPRPILTGGGHGCFIEAGGGRYFVYHRKLSADPGWADREIIAEPFSWDAHGYPVIAS
                     QRNAADLQLGPERAESEGIKVSSFASASELLA"
BASE COUNT          755 a         2176 c         2132 g          802 t
ORIGIN      
        1 gggccctcga ccgccccggc ctcctgaccg acgacatggc cgagctccgc agcttccagc
       61 ggccctacgc ccgccccgcc gccgaggtgg ccggctggcc ccgcgacccc tggcggctca
      121 cgccgccctt gtcgggggga caccccccgt cccccgggcc cgccgccggc ggcatcggac
      181 tggccgaggt cgtccgccgg gtgcgaccga cgatcctggt cggcacctcg acgaggaccg
      241 gcgccttcac cgaggaggtc gtgcgggcga tggccgcggg ctgcgaacgg ccgatcatcc
      301 tgccgctgtc gaacccgacg cgcctggccg aggccactcc ggccgacctg ctgcgctgga
      361 ccgatgggcg ggccctcgtg gccaccggca gccccttcga gccggtcacg ctgagcgaca
      421 gggtgaccta cgtgatcggc caggccaaca acgctctggt ctttcccggc ctcgggctcg
      481 gggcgatcgt ggcccgggcg gcccgggtca ccgacgggat gatcttcgcc gccgccgagg
      541 ccgtggccgg tctcgtcgac ccgtcgacgc ccggcgcttc gctcctgccg cagatcaacg
      601 acgtacggga gacgtcggtc gccgtggcgg tggcggtggc ggccgccgcc gccgacgccg
      661 gcgtggcccg ggcgccgctc gagccggacc tggaggccca ggtgcgccgc acgatgtggg
      721 agccggtcta ccggcccgtc cgccccgctt gacaggattc cgcccgtctg gccagggagg
      781 tttggacagt tatcggggac agtccccaac agatgtccaa agctgccgca ccgcttgcat
      841 catccggagc gggaccggcg gcgttcctcc attgcggcga cggcggccca gtgggcgtcg
      901 cccacccagg tgcgggcgaa gctggcggtg gcggctccgg cgaggtcggg acgggcggcg
      961 gggcgggcgg cgtcggcggc ggccttgatg ccggcgagcg cctcccgggg ggcgcgggtc
     1021 atccgctcca gcaactcgct caggcggtcg tcgaactccg cccggggcac gacccgttcg
     1081 acgaggcccc aggcggcggc ggtggcggcg tcgaccggga gaccggtggt caggaggtag
     1141 agggcccgcc cccggccgac cagcgcctgg agccgctcga tcccgcccca ggccggcatg
     1201 atcgccaggt cgacctggtt gaaggccagc ttcacgtcgt cggcggcgag gcggaagtcg
     1261 caggccaccg ccacctcgca gccgccgccg aaggcgtggc cgttgagggc cgccaccacc
     1321 gggacgggga gcgaggcgac ccggtcgagc agcgtccgca tcgtcagggc catggcctgg
     1381 gcctcggcct cggtgcggat ggcggccagc tccttcaggt cgccgccggc cacgaagatc
     1441 ttctccccct ggccccggac ggcgaccacc cgcaccccgg ggtcggcggc gacctcgtcg
     1501 aggacggcgt cgagctcggc catcgtcggg cggctgatgg cgttgccggc ctggggccgg
     1561 tcgatgacga tcagggccgc ggcgccgatc cgctcgaggc ggacgccctc agcctgcggc
     1621 aacgtcctgc tcctttcgag cggctgccgc cgcctctgtc ggggggacac cccccatccc
     1681 cccgggccac agggcgtcga cgccggccac caccgcttcg atcgacgttc cggtggggaa
     1741 cacggcgtcg acgccaagat cgaggagggc ccggcagtcg gaggccggga tcgtcccgcc
     1801 cacgacgacc ttcacgtcgt cgaggccgtt gtcccgcagg caatccacca cctggcgggc
     1861 caggcccaga tgggcgccgg acaggatcga cagccccacc aggtcgacgt cctcctgcag
     1921 cgcctgctcc acgatcaccg ccaccttctg gcggatgccg gtgtagatga cctcgtagcc
     1981 ggcgtcgcgc agcgcccggg ccacgacctt ggccccccgg tcgtggccgt cgaggccggg
     2041 cttggccacg agcacccgcc ggggctggtc ggcggacggc ggcatcagaa gaccaccggc
     2101 tggcggtact cgccccaggt gtcccgcagg gcctgggtga tctcgccgac ggtggcatag
     2161 gcctcgacgg cctcgaccag cagcggcatg aggttgacgt cgggctgttc cgcggcgctc
     2221 tggagctcct tcagcacccg ccgcacgtcg tcgccgcggc gggtccgctt gacctcggcg
     2281 agacggtcga gctggcgctg gcgcccgtcg gcatcgagcc cgtagacctg caggtcggcg
     2341 gggggctcct cggtccggaa gacgttcacg ccgacgatcg gccgctcgcc gccctcgatc
     2401 gccttctggg ccttccacgc ctcctcggcg atgagcccct gcacgtagcc gtcctcgatg
     2461 gcccgcacca tcccgccgtg gtcgtcgacg tcggccatga tcgccaccag ctgctcctcc
     2521 atggcgtcgg tcagcgactc cacgaaccac gacccgccga gcgggtcgac cgtgcgggcg
     2581 acgccggtct cgtaggccag gatctgctgc gtgcgcaggg ccagcgtcgt cgactcctcg
     2641 gtggggaggg cgaagggctc gtcccacgcc gaggtgaaca tcgactgcac gccgcccagc
     2701 accgacgcca tggcctcgta ggcgatccgc acgatgttgt tgtggggctg gggggcgtag
     2761 agcgtcgagc cgccggccac gcagcccatg cggaagaggc aggacgagtc cttctccgct
     2821 ccccagcgct ccttcaccaa tcgggcccag cgccgccgcc cggcccggta cttggcgatc
     2881 tcctcgaaga agtcgctgtg ggtgtagaag aagaacgaca cctggggggc gaactcgtcg
     2941 atgctcatcc gcccccgctc caggacggcg tcgacgtagg tcacgccgtc ggccagggtg
     3001 aaggccatct cctgggcggc cgtgcagccg gcgtcgcgga aatgggcgcc ggccaccgag
     3061 atggcgttgt agcgggggac atgctgggcg cagaactcga tggtgtccac gatcaggcgg
     3121 atcgacggct ccggcggcca gatccacgtg ccgcgggcga cgtactcctt caggatgtcg
     3181 ttctgcatcg tgccccggag gcgctcgatg gggacctgtt gtttctttcc aacggcgatg
     3241 tagaaggcca gcatgatggc cgccgtgccg ttgaccgtcc acgaggtcga cacccggtcg
     3301 agcgggatcc cgtcgaagag gacctcggcg tcggccagcg tgtcgagggc cacgccgacc
     3361 cggccgacct cctcggtgac gtcggggtcg tcggagtcgt agccgatctg ggtcggcagg
     3421 tcggcggcca ccgacaggcc ggttccgccg ttggccagca ggtacttgta gcgggcattg
     3481 gtctcggctg ccgtgccgaa cccgctgtac tggcggaacg tccagagctt gtgccggtag
     3541 cccgtcggga agttcccccg ggtgaacggg aaggcgccgg gatcgccgat cccggcgtag
     3601 tcgagctcag tgttcgccgg cgagtacagg gcgtcgacgg ggatacccga ttccgtggag
     3661 acgggctgct cgtcctggct catggcggcc tccttccggt agcctgctga tatgttacat
     3721 atcaggttcg gggactggta atcccgagtg gacagcggag acggccggtg gcggccgaag
     3781 gtcgccacca gggaggagcc cggcggaggc cgggcggggt cggcgaagcc gaccagaaac
     3841 atcggcggga ccgtccgggc ccgggccgcc gaggagctgc ggaaccgcat cctgaccggg
     3901 gcgctggcgg cgggcacccg gctcgatctc gacgcgctct gcgccgagtt cggcgccagc
     3961 cggacgccgg tgcgggaggc gctcctggag ctgtcctacg aggggctcgt cgaggtcgcc
     4021 ccccgcagcg gcatcacggt gatcggcctc accccccgcg acgtcctcga caacttcgcc
     4081 atcctcggca cgctggccgg caaggcggcc gagtgggcgg cggcccgcat cacggagccg
     4141 cagctcgacg agatccgccg gctggcccgg gccgtcgagc ggggcgagga cctcgtggcg
     4201 gccaactggg ccttccaccg ggccgtgcac cgggcgtcgg gctcgccccg catcgtgacg
     4261 ctgatccgcc agacggtcgg tgtcgtgccg accaacttct tcgacgtctt ccccgaccag
     4321 ggggagcaca gcgccgccga ccacgacgag ctcgtcgccg ccctcgccgc cggcgacggc
     4381 gccgccgccc gcctcgtggc cgaacgccac gtcaccgagg ccggcgtcgc cctggcccgc
     4441 ttcctggaag gcggcgcccg gggccggagc cggccggccg gacgggcccg ctcccgcgac
     4501 cggcgttcct gaggaacggg gggtgttgcg caggaacgcc gaaaccggcc gagccggtat
     4561 cgtcgaaggg gcgatggccc gcatcgagct ccggcacccg aagaacgagg acggcgactg
     4621 gttcgtcgac acccgctgca tcgactgcgg gacgtgccgc gacgtcgccc cgcacctctt
     4681 cggggccgtc gccgggcagt cggtggtccg gcgccagccc gatccggcgt cgtcggctga
     4741 gacgaccgac gcctggctgg ccgcccaggc ctgcccgacg acgtcgatcg ggacgcggtc
     4801 gcgccggcgg cggccggggc ggctctaccc gttcgagatc gagccggggt cgggcgtgtt
     4861 cgactgcggc tactgctcgg aggactcctt cggcgcctcg gcctggttcg tccaccgccc
     4921 ggccgccgag ggcggcaacc tgctgatcga ctccccccgc ttcaccgccg ccctggccga
     4981 cccgatggcc gagatgggcg ggatcgccca catcctcctc acccaccggg acgacgtcgc
     5041 cgacgccgcc cgctacgccg cgcgcttcgg ggcccgggtc tgggtccacg aggacgaccg
     5101 ccgggcggcg cccttcgcca ccgacgtcct ccggggcacg gcggggacgg agatcgcgcc
     5161 gggcctcgtg gccctgccgg tgcccggcca tacccggggg tcggtcgtct acctgctcga
     5221 cgaccgctac ctcttcaccg gcgactccct ggcctggagc cacgaccgcg ccgacctcac
     5281 cgccttccgc ggcgcctgct ggtactcctg gccggcccag gccgactccc tcgagcgcct
     5341 ggccgccagc ggccaccggt tcgcctgggt gctccccggc cacggtgccc gggcgcacgg
     5401 cgacccgacc gagctccacg accgcctcgt gggcctggtc gagcggatgc gccgggcggc
     5461 ttaggccagc agttccgagg cgctggcgaa cgagctcacc ttgatgccct cggattcggc
     5521 gcgctccggc cccagctgga ggtcggcggc gttgcgctgc gaggcgatga cgggatagcc
     5581 gtgggcgtcc cagctgaagg gctcggcgat gatctcccgg tcggcccagc cggggtcggc
     5641 gctgagcttg cggtggtaga cgaagtagcg cccaccgccg gcctcgatga agcagccgtg
     5701 gccgccgccg gtcaggatcg gccggggcag cttccgccac gacgccgggt cgaggacgtc
     5761 gccgccggtc cactccagca gcccgacctt gtactcctgc gtccagctgg cgtcggccga
     5821 gaacgtgatg aagagcttgc cgtcgtcctc gttgcgcagc acctg
//
LOCUS       DATGJT010000172         2655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_542538, whole genome shotgun sequence.
ACCESSION   DATGJT010000172 DATGJT010000000
VERSION     DATGJT010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542538"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1356
                     /locus_tag="VKX24_02985"
     CDS             <1..1356
                     /locus_tag="VKX24_02985"
                     /inference="COORDINATES: protein motif:HMM:NF042897.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HLJ07472.1"
                     /translation="AVVAAIAVIAAVLASGGKKPKPAAAGHGEIFLQPAAATGSNAYT
                     MSAATVTPTAVPAASPTTITAPAAVAVQGQSGAAVGLYGGTRDQASCNPAQMVAFLQQ
                     DPAKAGAWVAALNSDPTLRWSGGTQLTVADIPQYVAELTPVILREDTRVTNHGYANGA
                     PTTLQSVLQAGTAVMVDAYGIPRVRCACGNPLDPPIPVDVAPTYTGDAWPAFTPPAVV
                     VVEPPPTIINVFTLVDLNNPADGFTRPVGTSGASDGPDVVLPAPPPGASLAAASPSPS
                     TVVAAPAPSSTPAAPPSPSPAASTPPAGTPAPNVDATREGTVSVSSFTPGYPASLAVD
                     GDPTTSWFSTGDQDGPSSTFTWTHSRDDLITLVRITGNQDDANPSFRQGFGFNSVTLQ
                     ILNSAGAVVYSQNQPGPNDQAGLVSFTPGVTGRTVRLVLNGHISPSCGGFSELYVGVT
                     R"
     gene            complement(1373..2164)
                     /locus_tag="VKX24_02990"
     CDS             complement(1373..2164)
                     /locus_tag="VKX24_02990"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HLJ07473.1"
                     /translation="MVGASVIGPTHIRDGLPNQDAIGWHPPGGRGDALVVVVSDGHGA
                     RPHFRSGTGSALAVQVALDAGRAFLESPAPPDELPARIVDGWRAAVAVDLRERPFTDT
                     ELEVVELTHGGGVREAVEEDPLIAYGATLIAAIVDGPSALVLQLGDGDVLHATPAGVS
                     QPLPADPRLYGGMTTSLCMPDAVGETRMVRVTAPAGEGGVLVMATDGFKNAYLDDASF
                     LQVGPDIARAARAGPDGVAGQLGGWLAEAARHSGDDVSVAVIGFG"
     gene            complement(2178..>2655)
                     /locus_tag="VKX24_02995"
     CDS             complement(2178..>2655)
                     /locus_tag="VKX24_02995"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HLJ07474.1"
                     /translation="DPTPIDAFTWNDVAAGGDTNLGAALAMLAAVLTVPPMPERALPP
                     VLVLVSDGRPTDREFEDRLADLLALPWGRHAVRIAIGIGRDADQEVLQSFIGPGSATR
                     PLQANSPEDLAGLIRWATTVVLKEASQPAVASGDSGPLATPPPPGDLLIWGDDVTR"
BASE COUNT          365 a         1008 c          937 g          345 t
ORIGIN      
        1 gccgtggttg ccgcgatcgc ggtcattgct gccgtgctgg cgagcggggg caagaaaccc
       61 aagccggcgg cggctggcca tggcgagatc ttcctccagc cggcggcggc caccggcagc
      121 aatgcctaca cgatgtcggc ggcgacggtg accccgaccg cggttccggc cgccagcccg
      181 acgacgatca cggcgccggc ggccgtggcg gtgcagggac agtcgggcgc ggcggtgggg
      241 ctctacgggg gcacccgcga tcaggcgagc tgcaacccgg cccagatggt ggccttcctc
      301 cagcaggatc cggccaaggc cggtgcctgg gttgccgcgc tcaacagcga cccgacgctg
      361 cgctggagcg gtggcaccca gctcacggta gccgacatcc cgcagtacgt ggccgagctg
      421 accccggtga tcctccgcga ggacacccgc gtgaccaacc acgggtacgc caacggcgcc
      481 ccgaccacgc tgcagtcggt cctccaggcg ggaaccgccg tcatggtcga cgcctacggg
      541 atcccgcggg tgcgctgcgc ctgcgggaac ccgctcgacc cgccgatccc cgtcgacgtg
      601 gccccgacct acaccggcga tgcctggccg gccttcacgc ctccggcggt cgtggtcgtc
      661 gagccgcccc cgacgatcat caacgtcttc accctggtcg acctgaacaa cccggccgac
      721 ggcttcaccc ggccggtcgg gacctcggga gcctccgacg ggccggacgt ggtgctcccc
      781 gccccgccgc ccggtgccag cctcgccgcg gcgtcgccgt cgccctctac ggttgtcgcc
      841 gcgccggccc cgtcgtcgac gccggccgcc ccgccctcgc cctccccggc ggcctcgacg
      901 ccgccggcgg ggaccccggc accaaacgtc gacgcgacca gggagggcac cgtgtcggtg
      961 tcctcgttca cccccggcta cccggcgtcg ctggcggtcg acggggaccc gacgacctcg
     1021 tggttctcca ccggagacca ggacggcccg agttcgacgt tcacctggac ccactcccgc
     1081 gatgacctga tcaccctggt ccggatcacc ggcaaccagg acgacgccaa cccgtcgttc
     1141 cggcaggggt tcggcttcaa ctcggtgacc ctccagatcc tcaacagcgc cggcgccgtc
     1201 gtctacagcc agaaccagcc gggaccgaac gaccaggccg gcctggtgag cttcaccccc
     1261 ggggtcaccg ggcgtacggt gcggctggtg ctgaacggcc acatcagtcc tagctgtggc
     1321 gggttcagcg agctgtacgt gggcgtgacc cggtgagccg gcgggctcgg cgtcagccga
     1381 agccgatcac cgcgacagac acgtcgtccc cgctatggcg ggcggcctct gcgagccagc
     1441 ccccaagctg tccggcgacg ccgtccgggc cggcccgcgc cgcccgggcg atatccggcc
     1501 ccacctgcag gaagctggcg tcgtccaggt aggcgttctt gaacccgtcc gtcgccatca
     1561 ccagcacgcc gccttccccg gccggggcgg tgaccctgac catgcgggtc tcgcccacgg
     1621 cgtccggcat gcacagcgac gtcgtcatgc caccgtacag ccggggatcg gcgggcaggg
     1681 gctgggacac gcccgccggc gtggcgtgca ggacatcgcc gtcgcccagc tgcaggacga
     1741 gtgccgaggg cccgtcgacg atcgccgcga tcagcgttgc cccgtatgcg atcagcggat
     1801 cttcctcgac tgcttcccgg acacccccac cgtgggtcag ttccacgacc tcgagttcgg
     1861 tgtcggtgaa cggccgttcc cggaggtcga ccgccaccgc cgcccgccag ccgtcgacga
     1921 tccgagccgg cagctcgtcc ggtggagccg gcgactcgag gaaggcccgc ccggcgtcga
     1981 gcgccacctg caccgccagc gccgaaccgg tgccgctccg gaagtggggc cgggcgccgt
     2041 ggccgtccga cacgacgacg acgagggcgt cgccgcggcc gcccggtggg tgccagccga
     2101 tcgcatcctg gttggggagg ccatcccgga tgtgggtcgg cccgatgacc gaggccccga
     2161 ccacccattg gcccgggtca gcgggtgacg tcgtcgcccc agatcagcag gtcgcccggc
     2221 ggcggtgggg ttgccagcgg tccactgtcc ccggaggcga ccgctggctg cgaggcctcc
     2281 ttcaggacga cggtcgtcgc ccaccggatg aggccggcga gatcctccgg ggagttggcc
     2341 tgcagcggcc gggtggccga gccggggccg atgaacgact gcagcacctc ttggtcggcg
     2401 tcccggccga tcccgatggc gatacggacc gcatgccgtc cccacgggag ggcgagcagg
     2461 tcggcgagcc ggtcttcgaa ctcccggtcg gtcgggcggc catcggagac caggacgagc
     2521 accggaggaa gcgcccgctc cggcatcggc gggacggtca gcacggcggc gagcatggcc
     2581 agggcggctc cgaggttggt gtcacccccg gcggcgacgt cgttccaggt gaaggcgtcg
     2641 ataggcgtcg ggtcg
//
LOCUS       DATGJT010000173         4699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1162506, whole genome shotgun sequence.
ACCESSION   DATGJT010000173 DATGJT010000000
VERSION     DATGJT010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162506"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            236..1969
                     /locus_tag="VKX24_03000"
     CDS             236..1969
                     /locus_tag="VKX24_03000"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HLJ07475.1"
                     /translation="MSDLGVAVVVWDDDVPIYISPLFSDMIGYSPEELGVRVPAGIEA
                     EDPGPWHLKGGPAPALPPFEFQLLHEFEWVLIHRDGHRVAVDAAAGTISVGGRVETIG
                     VFCDRSEQERIEGELKTRTLQQAALVDLGQRALAGAEVSELMDQAVAILTRTLDVDCA
                     RVLEIAPDRRGFAVRAGVGWDDLPVEIGAVDLRLRSQAGFTLVSDTPVVVEDFDQETR
                     FNGPLPKVDGSVVSGMTVAIRGPDQAWGVLAAHSGRRRHYGPQDVQFLQAVANVLAEA
                     IVGKSVQDALRRAGDRERELREELEAHSRVVVAAQEAERRRIARELHDEIGQALTGLA
                     LSLASLERVAPPELRAALAEARAGMGELVSRVHDFSLSLRPPMLDDLGLLPALLWLTE
                     HVLSTQTGLQVDLEHDGLDRRFSWEVETAAYRIVQEALTNVVRHADSGRARVRCLVEG
                     EELFIEVADQGIGFKPQSVRPHTTSGLRGMQERARLLGGGVRIDSSQGKGTRVMARLP
                     LHSCLPGTAAAALEAAEAGEPAPAGAPGGPPAGKHGSPALAAASPLGSEPAKPAPSGP
                     GRAFAGTGARR"
     gene            1966..2619
                     /locus_tag="VKX24_03005"
     CDS             1966..2619
                     /locus_tag="VKX24_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010936757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07476.1"
                     /translation="MSVSVMLAEDHPVVREGLRAMLEAEGGFQVVGQTGNSSEIGGMV
                     QELRPDVLVLDLIMPGIGGLNALRELTRRRLDTPVVVLSMYANEAYVLEALQNGASAY
                     VLKQSEAAELIRGIREVCRGRRYLSPPLSQRAVDAYASRAGVKTPDDESQLTVREREV
                     LTLVGEGFTSAQIAERLFISVRTVETHRSNLMKKLGLHSQADMVRRALRREMGPLEP"
     gene            complement(2629..2811)
                     /locus_tag="VKX24_03010"
     CDS             complement(2629..2811)
                     /locus_tag="VKX24_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010696701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HLJ07477.1"
                     /translation="MCITCSDEAVPVTILELLEDDLARVDTGQTIEVVSVALVDAKIG
                     DVILVHAKEAIAVVRD"
     gene            3914..>4699
                     /locus_tag="VKX24_03015"
     CDS             3914..>4699
                     /locus_tag="VKX24_03015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07478.1"
                     /translation="MPSVLGGGSAPVEAPAADLEETAELMAEVQAVEDAIEEAEVEAI
                     AEEVAEAEAEAEAQEAEAEARPAAQAPRRRMPSVLGFEPRPVSAPADGDEEADEEVAA
                     AVAEVVAEAVADAEAEVIAEELAEAVAGAVLEAAEGAEPAALAGDTPAEPERRGPRRR
                     MPSVLDFEPRQPRGPAPSGGDALSAEAGEVAEELTEALGEAEAESEAEAEVEELLEEL
                     AEALEEAEEAAEEAADELADEVAEAIVEAVLEAEEIAEEIAEAE"
BASE COUNT          665 a         1586 c         1827 g          621 t
ORIGIN      
        1 gctctccccg accggccccg gccacggagc cccgccgctg ggatccccgg gcaacgggtc
       61 cccgtcaagc ggatcgtcgg gcaatggatc gtcgggcaat ggatctgcag gcaggacggc
      121 cccggcccac ggagctccgg cgcacgggtc cccggtccat gccgccgggt cgagcgagca
      181 gcactccgag caggcggcgg actcgccgtc atggctcgga aacctgccca aggtcttgag
      241 cgacctcggc gtggcggtcg tcgtctggga cgacgacgtc ccgatctaca tcagcccgct
      301 gttcagcgac atgatcggct actcgcccga ggagctgggc gtccgggttc cggccggcat
      361 cgaggctgaa gacccggggc cctggcacct gaagggtggg ccggctcccg ccctgccgcc
      421 gttcgagttc cagctcctgc acgagttcga gtgggtcctg atccatcgcg acggccaccg
      481 ggtcgccgtc gacgcggccg ccgggacgat cagcgtcggc ggccgggtcg agaccatcgg
      541 cgtcttctgc gaccgctccg agcaggagcg catcgagggc gagctcaaaa cccgcacgct
      601 gcagcaggcg gccctggtcg acctcggcca gcgggcgctt gccggcgccg aggtctcgga
      661 gttgatggac caggcggttg ccatcctcac ccggacgctg gacgtcgact gtgcccgggt
      721 gctggagatc gctcccgacc ggcgcggctt cgcggtgcgg gccggcgtcg gctgggacga
      781 cctgccggtc gagatcgggg cagtcgacct gcggctccgc tcccaggccg gcttcacgct
      841 ggtctcggac acccccgtgg tcgtcgagga cttcgatcag gagacccggt tcaacggtcc
      901 gctgccgaaa gtcgacggct cggtcgtcag cgggatgacg gtggcgatcc gcggccccga
      961 ccaggcttgg ggcgtgctgg cagctcactc cggccggcgc cggcactacg ggccgcagga
     1021 cgtccagttc ctccaggcgg tcgccaacgt gctggccgag gccatcgtcg gaaagagcgt
     1081 ccaggacgcg ctgcggcggg cgggtgaccg tgagcgggag ctgcgcgagg agctcgaggc
     1141 gcactcccgg gtggtggtcg ccgcccagga ggcagagcgc cggcggatcg cccgcgagct
     1201 gcacgacgag atcggccaag ccctgaccgg gctggcgctc agcctcgcca gcctcgagcg
     1261 ggtcgccccg cccgagctgc gcgcggccct ggccgaagcg cgggccggga tgggcgagct
     1321 ggtctcccgg gtccacgact tctcgctctc gctgcggcca ccgatgctcg acgatctcgg
     1381 cctgctcccc gccctgctct ggttgaccga gcacgtgctg tccacccaga ccgggctgca
     1441 ggtcgacctg gagcacgacg gcctcgatcg ccggttctcc tgggaggtcg agacggccgc
     1501 ctaccggatc gtgcaggagg cgctcaccaa cgtcgtccgc cacgccgaca gcgggcgggc
     1561 ccgggtgcgc tgcctggtcg agggggagga gctgttcatc gaggtcgccg accagggcat
     1621 cgggttcaag ccccagtcgg tgcgcccgca cacgaccagc gggctgcgcg gcatgcagga
     1681 acgggcccgg ctgctcggcg ggggggtccg catcgactcc tcgcaaggca agggaacccg
     1741 ggtgatggcc cggctgccgc tgcactcctg cctcccgggc actgcggcgg cggcgctgga
     1801 ggcggccgag gcgggtgagc cggctccggc cggtgcgccc ggcggaccgc ccgccggcaa
     1861 gcacgggagc ccggcgctgg cggcggcgtc cccgctcggg agcgagccag ccaagccggc
     1921 gccgtccggt ccggggcggg cgttcgccgg gacgggagcc cgacggtgag cgtgtcggtg
     1981 atgctcgccg aggatcaccc ggtcgtccgg gagggactgc gggcgatgct ggaggccgag
     2041 ggcggcttcc aggtggtcgg gcagaccggc aacagctcgg aaatcggcgg catggtccag
     2101 gagctccggc ccgacgtcct ggtgctcgat ctgatcatgc ccgggatcgg cggcctcaac
     2161 gccctgcgcg agctgacccg gcgccggctg gacaccccgg tcgtggtgct ttcgatgtac
     2221 gccaacgagg cgtatgtcct cgaggcgttg cagaacgggg cgagtgccta cgtcctgaag
     2281 cagtcggagg cggccgagct gatccgcggg atcagggagg tgtgccgggg ccggcgttac
     2341 ctcagccccc cgctgtcgca gcgggcggtc gacgcctacg ccagccgggc gggggtcaag
     2401 acccccgacg acgagtcgca gctgacggtc cgggagcggg aggtgctgac gctggtcggc
     2461 gagggattca ccagcgccca gatcgccgag cgcctgttca tcagcgtccg gacggtggag
     2521 acccaccgat ccaacctgat gaagaagctc ggtctgcact cccaggccga catggtgcgg
     2581 cgggcgctgc gccgggagat gggaccgctc gagccgtagg ggtcccggtc agtcgcggac
     2641 gaccgcgatc gcttccttgg cgtggaccag gatcacatcg ccgatcttgg cgtccacgag
     2701 ggccacgctg accacctcga tcgtctgacc ggtgtcgacc ctggccaggt cgtcctccag
     2761 cagctcgagg atcgtcaccg gcaccgcctc gtcggagcag gtgatgcaca cgtccccgta
     2821 gcactcgggc acctgcggcc ggggggcctg cgggtgggcg gtggggccga gcatcgggag
     2881 cggtacccgg acgccgacgg tgggctcttc tggcatggtc gacccagtgt aggcgcagtt
     2941 ggtgggcggg ggcgcgccat ggcttcgccg gagctcggat ggtgccctga tccgcccgac
     3001 cggccagacc tagacaatcg ggaggcgccg ggacgataat cggccggccg atcggcccca
     3061 ccgacaaacg gtgtgggcca atgtcgaagg aagggggttc gagcaggcaa tgagcgtgat
     3121 cacgggtgtg gcggttctca tcctggcgtt cttcatcgtg cagtcgatcc cggacatcca
     3181 gcgctacgcc aagcttcggg acatgtgaga tgtagcccag catgcagccc ttcgcacggg
     3241 cccctcgatc gtggccggct cccctcgtgt tctcagcggg acgagggcgc cgcaccttcg
     3301 aggggctcgt gcgcgtcctg ggcgtcctgg gcgggcgcgg gattgagcgg ggggtggttg
     3361 cgggcagatg atgaggcaat acgtcaggtg atgccctgct cgccagccgt ggggcgcacg
     3421 caagccggtt tccgggaggg gctccagcga gtggttccca tcggggggct ccgtcgaacg
     3481 aaggggaggg ttgatgccat cactggatga cttcgtcagc aggtttgcgg gagaaggctc
     3541 cccgggggtg gcggacctcc tccgctcagc cttgggcaag gcctccgccc ggcccgagct
     3601 tcaggaggcg atgaccaagg tcctcggtgc ggctgccccc gtgatggccg cggtgatgaa
     3661 ggcgcgcttc gcccaggcgg ccgccggcgc ggccggcacc ggtggcgggg aagccacggg
     3721 aagccgggcg ggcgggggag cccccccgcc gatcagcacc ggacgccggg ggatgccgag
     3781 cgttctcggc ggctcgcggc ccggggcagc tgccccagcc cgcgccgccg ctgcggtgcc
     3841 cgccgagccc gccgagcccg cggtgccggc tgcccaaccg gcgcaggcgc ccacgtcctc
     3901 cggacgccgg cggatgccga gcgtgctcgg gggcggttcg gcgccggtcg aggcgccggc
     3961 agccgacctg gaggagaccg ccgagctgat ggctgaggtt caggcggtcg aggacgccat
     4021 cgaggaggcc gaagtcgagg ccatcgccga ggaagtcgcc gaagccgaag ccgaagcgga
     4081 ggcgcaggag gccgaggccg aggcgcggcc agcggcgcag gctccccgcc ggcgcatgcc
     4141 gagcgtcctg ggttttgaac cacggccggt ctcggcgccg gccgacggcg atgaggaggc
     4201 cgacgaagag gtcgccgctg cggtagcgga ggtggtagct gaggcagtcg ccgatgccga
     4261 ggcggaagtg atcgccgagg agctggccga agctgttgcc ggagcggtgc tggaggcggc
     4321 agagggggcc gagcctgccg cgctggccgg ggacaccccg gccgagccgg agcgccgcgg
     4381 cccccgtcgg cgcatgccga gcgtcctgga cttcgagccc cggcaaccac gcgggcccgc
     4441 cccttccggg ggcgatgccc tgtccgccga ggccggcgag gtggccgagg aactgaccga
     4501 ggcgctgggc gaggcggaag cagagtcgga agccgaagcg gaagtcgaag agctcctgga
     4561 ggagctggcc gaggcgctcg aggaagccga ggaggccgca gaagaggcgg cggacgagtt
     4621 ggctgacgaa gttgcagagg cgatcgtcga ggcggtcctc gaggcggaag agatcgccga
     4681 ggagatcgcc gaggctgag
//
LOCUS       DATGJT010000174         2836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_437851, whole genome shotgun sequence.
ACCESSION   DATGJT010000174 DATGJT010000000
VERSION     DATGJT010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437851"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..876
                     /locus_tag="VKX24_03020"
     CDS             211..876
                     /locus_tag="VKX24_03020"
                     /EC_number="3.4.22.70"
                     /inference="COORDINATES: protein motif:HMM:NF016119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0016485 - protein processing [Evidence
                     IEA];
                     GO_process: GO:0045184 - establishment of protein
                     localization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sortase"
                     /protein_id="HLJ07479.1"
                     /translation="MTDTSLDRPLAAAGKTGRLREGSRFFFDALRTRPAARRMLSGVS
                     IVAAVLAIGLLAYPLATNLMQDRLQSKLAIQLRSPQNKAAYAAGQTREGDALTRIVIP
                     AIKVDTVVVEGTGASALRAGAGHYPNTPLPGEEGNVAIAGHRTTYGKPFADLDRLNSG
                     DEIVLETPIGRHVYRVSRPPFVVSNTDFTVIDQTPGHHLTLTTCHPKGSARQRLVVKA
                     DME"
     gene            900..2258
                     /locus_tag="VKX24_03025"
     CDS             900..2258
                     /locus_tag="VKX24_03025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07480.1"
                     /translation="MRKVATLAALAGLALPLLPGGRALAQGNSEQPAFVQWQSPEEGA
                     KVAGQSVHVKARVAFDGGVKSWSVEVLAPDGADYPGFGTLCEKAEGGSPATVNVDCVW
                     DTTAYPDDGGPAQNRPYVVRVTAQGGARSGGMFSNNNNQPPAPRHDDRNVIVSNPVSA
                     PRDVHLGWTDNTKQATVQWQPNPEPDITSYVVQERVGDGPWKTVGQAGGKVTTFTRNL
                     SAPGTYRYQVAALRAAGSGNDTIQSAWSGPSSEPKQIVVATPKRPEPTTTTTQPPVAD
                     AAGDTGAPGGPADPGTAPPPGSAAGSPNGPAAPGAPAPVTAGSDTPRGAFVSPIQPGS
                     PGSVKSGGVTFGAPVAPLAAKPGQPAAKPELPDESEGPDTGFSSSLPYKAPAAAGNEK
                     EDGADGGRMLVGMPETRGGDDTRRLLIPLAGGLLLFVFAMHALYASRRAAAEARALET
                     SD"
     gene            complement(2280..>2836)
                     /locus_tag="VKX24_03030"
     CDS             complement(2280..>2836)
                     /locus_tag="VKX24_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019855846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Zn-binding domain-containing protein"
                     /protein_id="HLJ07481.1"
                     /translation="ARPVGRSTLHLGGVEVTTTTVAYQRRRIGSGEVLETVDLRLPPR
                     RLVTRAGWYTVPVEVAVEAGLDAVSVLSAAHAAEHALIGMLPLFAICDRWDVGGVSMA
                     VHPATGEPTIFIYDGYPGGAGIAELAFDAADRHLAAACDVVARCPCAAGCPSCVQSPK
                     CGNWNEYLDKAAAVALMRAVLAGA"
BASE COUNT          423 a         1118 c          979 g          316 t
ORIGIN      
        1 ccgcggcgat cccggctctc ctcggtgtga gcctcgggac cggcacgatc atccggcgcc
       61 gccgtcgcta acccgaccct gaggggcatc cgcccccacc acaccagcat ctgctacacc
      121 acctagtaac accggtatcc ggggtcggga cgaatgaagt cccgaccccg gaaccatctc
      181 ccaaaccctc ctgaggtggg gagccgcagc gtgaccgaca cttccctcga ccgccccctc
      241 gccgccgctg gcaagaccgg ccgcctgcgc gagggcagcc ggttcttctt cgatgcgctc
      301 cggacccgac ccgcggcccg ccggatgctc tcgggggtct cgatcgtggc cgccgtgctg
      361 gcgatcggcc tcctggccta cccgctggcc acgaacctca tgcaggaccg gctccagtcg
      421 aagctggcca tccagctgcg cagcccgcag aacaaggccg cctacgccgc cgggcagacg
      481 cgggagggcg acgccctcac ccgcatcgtg atcccggcga tcaaggtcga caccgtcgtg
      541 gtcgagggca ccggggccag cgccctgcgg gccggcgccg gacactaccc caacacgccg
      601 ctgccgggcg aggagggcaa cgtggcgatc gccggccacc gcaccaccta cggcaagccc
      661 ttcgccgacc tcgaccggct gaactccggc gacgagatcg tgctcgagac gccgatcggc
      721 cggcacgtct accgcgtgag ccgcccgccg ttcgtcgtgt cgaacaccga tttcacggtc
      781 atcgaccaga ccccgggcca ccacctgacg ctcaccacct gtcatcccaa gggttcggcc
      841 cgccagcggc tcgtcgtgaa ggcagacatg gaatgacgag gacgaggatc ggagtcccca
      901 tgcgcaaggt cgccacgctc gccgccctgg cggggctggc ccttcccctg ctgcccggcg
      961 gacgggcgct ggcccagggc aacagcgagc agcccgcctt cgtccagtgg cagtcgcccg
     1021 aggagggcgc caaggtcgcc ggccagtcgg tccacgtcaa ggcccgcgtg gccttcgacg
     1081 gcggcgtgaa gagctggtcg gtcgaggtcc tcgcccccga cggcgccgac tatcccggct
     1141 tcggcaccct gtgcgagaag gccgagggcg gctcgccggc caccgtcaac gtcgactgcg
     1201 tctgggacac caccgcctac cccgacgacg gcggcccggc ccagaaccgc ccctacgtgg
     1261 tgcgggtcac ggcccagggc ggcgcccgga gcggcggcat gttctccaac aacaacaacc
     1321 agccccccgc gccccgccac gacgaccgca acgtcatcgt gtcgaacccg gtgtcggcac
     1381 cccgcgacgt ccacctcggc tggaccgaca acaccaagca ggcgaccgtg cagtggcagc
     1441 cgaaccccga gcccgacatc accagctacg tcgtccagga gcgggtcggc gacgggccgt
     1501 ggaagaccgt cgggcaggcg ggcgggaagg tgacgacgtt cacccgcaac ctgtcggccc
     1561 ccggcacgta ccggtaccag gtggcggccc tgcgggccgc cggcagcggc aacgacacga
     1621 tccagtcggc gtggtcgggg ccgtcgtcgg agccgaagca gatcgtggtg gccacgccga
     1681 agcggcccga gccgacgacg acgaccaccc agccccccgt ggccgacgcc gccggtgaca
     1741 ccggtgctcc gggcggtccg gccgatcccg ggacggcacc gccgcccggc tccgccgccg
     1801 ggtcgccgaa cggcccggcc gcccccggcg ccccggcgcc cgtcacggcg ggatccgaca
     1861 ccccccgcgg cgccttcgtc tcgccgatcc agcccggctc gcccggcagc gtgaagtcgg
     1921 gcggcgtgac gttcggcgcc cccgtcgccc cgctggcggc caagccgggc cagccggcgg
     1981 ccaagcccga gctccccgac gagtccgagg gccccgatac cggcttctcc tcgtcgctgc
     2041 cctacaaggc gccggccgcc gccgggaacg agaaggagga cggcgccgac ggcgggcgca
     2101 tgctggtcgg catgccggag accaggggcg gcgacgacac ccgccgcctc ctgatcccgc
     2161 tggccggcgg cctgctgctg ttcgtcttcg ccatgcacgc cctctacgcc agccggcggg
     2221 ccgccgccga ggccagggcc ctcgagacca gcgactaacg ccgccggcgc cgcgagcggt
     2281 caggcgccgg ccagcacggc ccgcatgagg gccacggcgg cggccttgtc gaggtactcg
     2341 ttccagttgc cgcacttcgg cgactgcacg caggacgggc acccggcggc gcaggggcag
     2401 cgggccacga catcgcaggc ggcggccagg tggcggtcgg cggcgtcgaa ggccagctcg
     2461 gcgatgccgg ccccgccggg atagccgtcg tagatgaaga tcgtcggctc ccccgtcgcc
     2521 gggtggacgg ccatcgaaac gccgccgacg tcccaccggt cgcagatggc gaacagcgga
     2581 agcatcccga tcagggcgtg ctcagcggcg tgggcggcgg acaggaccga gacggcgtcg
     2641 agcccggcct ccaccgccac ctcgacggga acggtgtacc agccggcccg ggtcaccagc
     2701 cgccggggcg ggagacggag gtcgaccgtc tcgaggactt cgccgctgcc gatgcgccgg
     2761 cgctggtagg ccaccgtcgt cgtcgtgact tccacgccgc cgaggtggag cgtcgagcgg
     2821 ccgacgggcc gggccc
//
LOCUS       DATGJT010000175         2739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1268325, whole genome shotgun sequence.
ACCESSION   DATGJT010000175 DATGJT010000000
VERSION     DATGJT010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268325"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2521
                     /locus_tag="VKX24_03035"
     CDS             <1..2521
                     /locus_tag="VKX24_03035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR02680 family protein"
                     /protein_id="HLJ07482.1"
                     /translation="RADAAAEVRRLRTERSALQARREDIAAERDDAPARAPGRPESRP
                     AACAGLWRCVDFHPSLGASERAGLEAALEAGGFLDALVTPEGTLLDAGTLDTVLVGAP
                     VAGPTLGEWLVVDPASPLPAPAVASVLAMIGVVVGPAGSGSGPAGTSSGPAGSGSGPT
                     GTASGPARDWVSLDGRWANGALSGRWAKSSAEFVGSSARASARARRIAEIDEQIAAVI
                     AAGDAAQAAEALLVGLERRVGDAERAFPAPTALRDARRDAARAEADLTRADAQLARVA
                     EALAAAQGRLGQATAALARAEEAAGCRASAVEALLAALGAWGKLLAEIVPVIQSAARD
                     WSRAEDADTRAGERRRAAESSAVVSRTDNEEAQRRRGEADELRQSVGADVEAILARKG
                     ELEAALASARAELDDLASRRDLVRDRLTEAQTKLDVTRQEREQRERERTDGLGGLAAL
                     AATELGPLALGPIDPDRDLLQVTAGLAFARSAVDRLASVAIDQRTQDLAVNRLHDSFV
                     NLRARLGADFDPHLDSRDGVSLCFAKLNGVTVGAVELAGALEEQVQRRRETLSAEERD
                     VIERHLLAEVGSHLGERIHAAWTQIKRMNDQLGQHGTRSGVTLQLRWEADPEAGAGAG
                     EALKLLRREVHLLSAEERATLAAFLTERVRAAREGAEGADAVERMMAALDYRRWHRFV
                     VMRQDGGREVRFTARSQGHGSGGEQAKLAHLPLFAATAAYYVSAAPTCPRLIVLDEAF
                     AGIDDEQRADCMGMLVDLGLDVVLTNYNEWGCYPQVPSVAIYHLERTEGQRGVAALRF
                     VWDGRARREDDPFLESIEPEPEGLFAEEFEDPGSPWGGPDD"
BASE COUNT          316 a          976 c         1090 g          357 t
ORIGIN      
        1 gcgggccgat gccgccgccg aggtccgccg cctccgcacc gagcggtcgg cactgcaggc
       61 ccggcgggag gacatcgccg ccgagcgcga cgacgccccg gctcgcgccc ccggtcgccc
      121 ggaatcccgc ccggccgcct gcgccgggct gtggcgctgc gtcgacttcc acccctccct
      181 cggtgcctcg gagcgggccg ggctggaggc ggcgctcgag gcggggggct tcctggacgc
      241 cctggtcacg cccgagggga ccctgctgga cgccggaacc ctggacacgg tgcttgttgg
      301 tgcgccggtt gcgggtccga cgctggggga gtggctggtg gttgacccgg cctccccgct
      361 ccccgccccc gccgtggcct cggtgctcgc catgatcggt gtcgttgtcg ggccggcagg
      421 gtccggttcc gggccggcgg ggacatcttc cgggccggcg gggtccggtt ctgggccgac
      481 ggggactgct tccgggccgg cccgggactg ggtgagcctc gatggccgct gggcgaacgg
      541 cgccctctcc gggcgatggg ccaagtcgtc ggcggagttc gtcggctcgt ccgcccgtgc
      601 ctccgcccgg gcacggcgca tcgccgagat cgacgagcag atcgccgcgg tcatcgccgc
      661 cggcgacgcc gcccaggccg ccgaggcgct gctggttggg ctcgaacgcc gggtgggcga
      721 cgccgagcga gccttcccgg cccccaccgc gctgcgcgac gcccgccggg acgcggcgag
      781 ggcggaagcc gacctcaccc gggccgatgc ccagctcgcc cgggtagccg aggccctggc
      841 ggccgcccag ggacggttgg ggcaggcgac cgccgcgctg gcccgtgctg aggaggcagc
      901 tggctgccgg gcgagcgcgg tcgaggccct gctcgccgcc ctcggcgcct ggggcaagct
      961 gctggccgag atcgtcccgg tgatccagag cgccgcccgg gactggagca gggccgagga
     1021 cgccgacacc cgggcgggcg agcggcggcg tgcggccgag tcgtccgctg ttgtgtcccg
     1081 cacggacaac gaggaggccc agcgccgccg gggcgaggcc gacgagctgc gccagagcgt
     1141 gggggccgac gtcgaggcga tcctggcccg caagggcgag ctggaggcgg cgttggcgtc
     1201 ggcccgggct gagctggacg acctggccag ccgccgggac ctggtgcggg accggctgac
     1261 cgaagcgcag accaaactcg acgtcacccg ccaggagcgg gagcagcggg agcgggagcg
     1321 gaccgacggc ctcgggggat tggccgccct cgccgccacc gagctggggc ctctggccct
     1381 tgggccgatc gaccccgacc gggacctgct ccaggtgacc gccgggttgg ccttcgcccg
     1441 ctcggcggtg gaccggctgg cgtcggtggc catcgaccag cggacccagg acctggcggt
     1501 caaccggctg cacgattcct tcgtcaacct ccgggctcgg cttggggccg acttcgaccc
     1561 ccacctcgac tcccgggacg gtgtctcgct gtgtttcgcc aagctgaacg gggtgacggt
     1621 cggggcggtc gagctggccg gtgccctcga ggagcaggta cagcgccgtc gggagaccct
     1681 gtcggccgag gagcgcgacg tcatcgagcg ccacctgctg gccgaggtcg gcagccacct
     1741 cggcgagcgg atccacgccg cctggaccca gatcaagcgg atgaacgacc agctcggcca
     1801 gcacggaacc cgttcggggg tcaccctcca gctccggtgg gaggccgatc ccgaggccgg
     1861 ggcgggggcc ggcgaggcgc tgaagctgct tcggcgggag gtgcacctgc tgagcgccga
     1921 ggagcgggcc accctggccg ccttcctgac cgagcgggtc cgcgccgccc gcgagggggc
     1981 ggagggggcc gacgcggtcg agcggatgat ggcggcgctc gactaccgcc ggtggcaccg
     2041 cttcgtcgtg atgcgccagg acggggggcg ggaggtgcgg tttacggccc ggtcgcaggg
     2101 ccacggttcg ggcggcgagc aggccaagct ggcccacctg ccgctgttcg ccgccactgc
     2161 ggcgtactac gtctcggcgg cgcccacctg cccccggctg atcgtgctcg acgaggcgtt
     2221 tgccggtatc gacgatgagc agcgggcgga ctgcatgggg atgctggtcg acctgggcct
     2281 tgacgtcgtg ctgaccaact acaacgaatg gggttgctac ccgcaggtcc cttcggtggc
     2341 gatctaccac ctggagcgga ccgagggcca gcggggcgtc gctgcgctgc gcttcgtctg
     2401 ggacggccgg gcccggcggg aggacgaccc gttcctggag tcgatcgagc ccgagcccga
     2461 gggcctgttc gccgaggaat tcgaggaccc gggcagcccg tggggcggcc ccgacgattg
     2521 acgtgggcgc ctcggtccct gacccgggct tagctctctc ggccggtctg gcctctgccc
     2581 ccgaggcgat cgccggcgat cctcggttgg gccgtctgct gcgggcggcc caccggcggc
     2641 tggaggcgag cggcggtgtg gtcgaggggg tgaccgcggt cgttcgccgc cccagtgacg
     2701 acgagcggca ggcggtggac cggctgctcg gcatccgtt
//
LOCUS       DATGJT010000176         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_853781, whole genome shotgun sequence.
ACCESSION   DATGJT010000176 DATGJT010000000
VERSION     DATGJT010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853781"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VKX24_03040"
     CDS             complement(<1..818)
                     /locus_tag="VKX24_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011206600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07483.1"
                     /translation="MDNPAIVASGLVKRFGDVPALAGIDLVVPPGTVLGLLGPNGAGK
                     TTTVRILTTILKPDAGEARVFGHDVAADPEAVRNSIGLAGQYAAVDENLTGVENLILV
                     GRLTHLPKPLIKERSSELLERFDLSHAANRLLRTYSGGMRRRLDLAASLMHRPPVLFL
                     DEPTTGLDPRSRIALWEVIEKLRASGTTIVLTTQYLEEADRLTERISVIDGGVIIAEG
                     TSDELKQQVGGDVLSLAVADKRETARTATLLANAFSVRSSDVHTEPALGQITVPV"
     gene            complement(906..1202)
                     /locus_tag="VKX24_03045"
     CDS             complement(906..1202)
                     /locus_tag="VKX24_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HLJ07484.1"
                     /translation="MISKTPAKKGGTTKVTFELPAEYAGEQVCLCGEFNSWAADATPM
                     TKRKDGRFSTTLTLPQGQSYRYRYLVDGERWVDDPAADGYVDNGFGTKDSVVVL"
     gene            1304..>2441
                     /locus_tag="VKX24_03050"
     CDS             1304..>2441
                     /locus_tag="VKX24_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07485.1"
                     /translation="MAAAHASRRPAVHLPYVVLALVLLAGLLPGGPAARAASGPTLQV
                     TPEVSDGGAANSATLTAVLSGTQRGDTYVDFEVMNGPADKDGDTPDTPDTSCKVPAGK
                     VSCQVAITATEAGTSLVRGWIRGTKPDMTEARLANDKATPLIDALDPAADCRPSDPGT
                     CHDGSTPNAGDVPEPDATDVVQIAFLNFTDGRLKCVDPDGSKITYRPAATSTADAETY
                     TCTLTTSAGAPIAGAFVDGKILPKMKSAGDAGNADFNDLCQTDANGRCSTGDKIGLPT
                     GGEIICFWAEPAKQGNANQGQDNAYKPGGAHTDGGDCGQDSVNQATGVDVTDVVYLDA
                     DNPRPEGLDVQPENQLLGSPARFSLQGTVYDQFGHPYTKGGVKLQ"
BASE COUNT          381 a          880 c          834 g          346 t
ORIGIN      
        1 accgggacgg tgatctgccc cagggccggt tcggtgtgca cgtcgctgga ccgcaccgag
       61 aacgcgttgg ccagcagcgt ggcggtcctc gccgtctcgc gcttgtccgc gaccgcgagg
      121 gacaggacgt cgccgccgac ctgttgcttg agctcgtccg acgtgccctc ggcgatgatc
      181 accccaccgt cgatgacgct gatccgctcg gtcaggcggt ccgcctcctc caggtactgg
      241 gtggtcagca cgatcgtcgt gcccgacgcc cgcagcttct cgatgacctc ccacagcgcg
      301 atgcggctgc ggggatcgag gccggtggtc ggctcgtcga ggaacagcac cggcggccgg
      361 tgcatgagcg aggccgccag gtcgaggcgc cggcgcatgc cgcccgagta ggtgcgcagc
      421 agccggttgg cggcgtggct caggtcgaac cgctccagca gctcggagga ccgctccttg
      481 atcagcggct tcgggaggtg cgtgagccgc ccgacgagga tgaggttctc gaccccggtg
      541 aggttctcgt cgacggcggc gtactggccg gccaggccga tcgagttgcg gacggcctcg
      601 gggtcggcgg cgacgtcgtg gccgaatacc cgggcttcgc ccgcgtcggg cttgaggatc
      661 gtggtgagga tccggaccgt agtcgtcttg ccggcgccgt tcgggccgag gagcccgagg
      721 acggtgccgg gcggcacgac gaggtcgatc ccggcgagag cggggacatc gccgaaccgc
      781 ttcacgaggc cggaggcgac gatggcggga ttgtccatac gcccagtatc ggccagatag
      841 ttgggcgaac taaatgaatt tcgtcgtcct cttcgcgggg gtttcgggcg atttgtccag
      901 gttcgctaca ggacgacgac cgaatctttc gtgccgaagc cgttgtcgac gtacccgtcg
      961 gcggccgggt cgtcgaccca gcgctcgccg tcgacgaggt agcggtagcg gtacgactgg
     1021 ccctgcggaa gcgtcagcgt cgtgctgaac cgcccgtcct tgcgcttggt catcggcgtg
     1081 gcgtcggccg cccaggagtt gaactcgccg cagagacaga cctgctctcc ggcgtactcc
     1141 gccgggagct cgaaggtgac cttcgtggtc ccgcctttct tggccggtgt cttgctgatc
     1201 atgcgactct cctccagcac ggggtcgagg ggcccaccga tagccgaact ctagcggccg
     1261 aggtgccgcg agtcctggcc ccatcggggt gagaatgtgc gccatggccg cagctcacgc
     1321 ttcccgccgc cccgccgtcc atctccccta cgtcgtgctc gccctggtgc tgctggcggg
     1381 cctcctcccc gggggcccgg ccgcccgggc cgcctccggc ccgacactgc aggtgacccc
     1441 cgaggtctcc gacggcgggg ccgccaactc ggcgaccctc accgccgttc tctccggcac
     1501 ccagagaggc gacacctacg tcgacttcga ggtgatgaac gggccggccg acaaggacgg
     1561 cgacacgccg gacacgcccg acaccagctg caaggtgccg gcgggcaagg tcagctgcca
     1621 ggtggccatc accgccaccg aggcggggac gagcctggtc cggggttgga tccgggggac
     1681 gaagcccgac atgaccgagg cccggctggc caacgacaag gcgacgccgc tgatcgacgc
     1741 cctcgacccg gccgccgact gccgcccgtc cgaccccggc acctgccacg acgggtcgac
     1801 gcccaacgcc ggcgacgttc ctgagcccga cgccaccgac gtcgtgcaga tcgccttcct
     1861 caacttcacc gacggccgcc tgaagtgcgt cgaccccgac ggcagcaaga tcacctaccg
     1921 gccggcggcc accagcaccg ccgatgccga gacctacacc tgcacgttga cgaccagcgc
     1981 cggggcgccg atcgccggag cgttcgtcga cggcaagatc cttccgaaga tgaagtcggc
     2041 cggcgacgcc ggcaacgccg acttcaacga cctctgccag accgacgcca acggccgctg
     2101 cagcaccggc gacaagatcg gcctccccac cggcggcgag atcatctgct tctgggccga
     2161 accggccaag cagggcaacg ccaaccaggg gcaggacaac gcctacaagc ccggcggggc
     2221 gcacaccgac ggcggcgact gcggccagga cagcgtgaac caggccaccg gcgtcgacgt
     2281 gaccgacgtc gtgtacctcg acgccgacaa cccccggccg gagggcctcg acgtccagcc
     2341 cgagaaccag ctcctcggtt cgccggcccg cttcagcctc caggggaccg tctacgacca
     2401 gttcggccac ccgtacacca agggcggtgt gaagctccag g
//
LOCUS       DATGJT010000177         2314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_128135, whole genome shotgun sequence.
ACCESSION   DATGJT010000177 DATGJT010000000
VERSION     DATGJT010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128135"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /locus_tag="VKX24_03055"
     CDS             complement(<1..1029)
                     /locus_tag="VKX24_03055"
                     /inference="COORDINATES: protein motif:HMM:NF023418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3488 domain-containing protein"
                     /protein_id="HLJ07486.1"
                     /translation="MSAQRNGSLLTLATLSVAATLGFARLFNDASWVLPVMLAAVGAH
                     LIGLATRRWPGPAALGISAAALGLLLCAVVAGHTTFYGLPTASTLSALGRAWTAGLDS
                     FRNAVAPTKTTPGLLLLSVGGTWVCAAAADWLAFRGDATLTAILPPFVLYVMGAALGK
                     DGFQLPTTFVFVVAALLFVAANHAAGLPSAWFSGRGSPPGLARMAMGAAPVALLVAAA
                     GLVLGPNLPGAQAQPLVELRGTGGGGDTSRITVSPLVDLKARLTQTPVTELFAVRSPV
                     PAYWRLTALEEFDGRIWSSRGTYRPAGDHLPKESGDTSLTYKVLQDFRIGPLDSFWLP
                     AAYRPARID"
     gene            complement(999..2201)
                     /locus_tag="VKX24_03060"
     CDS             complement(999..2201)
                     /locus_tag="VKX24_03060"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HLJ07487.1"
                     /translation="MRPSLTNRGWSLCGAAAALLVGARVLGVQELSMLAAAAFLVVVV
                     AFVRVRRQPLRISAGRVLHPARAEAGSAARADLTVMNLGSRTTPVLAAVDSFDGGQRV
                     ARFLVPPLAPGETADAAYRMPTARRGIYRVGPLTLSVQDPFGVVETGVTLAGEERFIV
                     YPRVEDVLPIPGAASREARMGSMQASRVPVGLDFFGLREYEVGDDLRRVHWRSTARTG
                     ELMLRQDEMPWESRSTILLDTRPSTHQGDSFERAVEIAASLATAMCRGRRQVRFLTTG
                     GLDIRSSGADRYPQIMEYLAGASVETYVRWDQVVEGLRRAGDGPLAAIVANVDRSDLV
                     SLAALRPRLGLVILAAIRPSAYGGVDVGPAPAAPGAIVVPVSAGSPFRNAWNQAVTTC
                     QRSATVRS"
BASE COUNT          332 a          848 c          903 g          231 t
ORIGIN      
        1 gtcgatgcgg gccggccggt aggcggcggg cagccagaac gagtcgagcg ggccgatgcg
       61 gaagtcctgc agcaccttgt aggtcagcga cgtgtcgccg ctctccttgg gcaggtggtc
      121 gccggccggc cggtaggtgc cccgcgacga ccagatccgc ccgtcgaact cctccagcgc
      181 agtgaggcgc cagtaggcgg ggaccggcga gcggacggcg aacagctcgg tgaccggcgt
      241 ctgcgtcagc cgggccttga ggtcgaccag cgggctcacg gtgatgcggg acgtgtcgcc
      301 gccgcccccc gtcccccgca gctcgaccag cggctgggcc tgggccccgg ggaggttggg
      361 cccgaggacg agcccggccg ccgccaccag cagcgccacc ggcgccgctc ccatggccat
      421 ccgggccagc ccgggcgggg aaccccggcc ggagaaccag gcgctcggga ggccggcggc
      481 gtggttggcc gccacgaaca gcaacgccgc cacgacgaag acgaacgtcg tggggagttg
      541 gaagccgtcc ttccccagtg ccgcgcccat cacgtagagg acgaacggag ggaggatggc
      601 ggtgagggtg gcgtcgcccc ggaaggccag ccagtcggcg gcggcggcgc agacccaggt
      661 gccgccgacc gagagcagca gcaggcccgg cgtggtcttc gtgggggcaa cggcgttgcg
      721 gaacgagtcg agccccgccg tccacgcccg gcccagcgcc gagagcgtgc tggccgtcgg
      781 cagcccgtag aacgtggtgt gcccggccac cacggcgcag agcagcaggc ccagggccgc
      841 cgccgagata ccgagggcgg cgggccccgg ccagcgccgg gtggccaggc cgatcaggtg
      901 ggcgccgacg gcggccagca tgaccggcag cacccaggag gcgtcgttga acagccgggc
      961 gaagcccagc gtggcggcca ccgagagggt ggcgagcgtt aggagcgaac cgttgcgctg
     1021 cgctgacatg tggtcacggc ctggttccag gcgttgcgga agggactgcc ggccgagacc
     1081 gggacgacga tcgcccccgg cgccgccggg gccggcccga cgtcgacgcc tccgtaggcg
     1141 gacgggcgga tggcggcgag gatgacgagc ccgagccggg gccgcagcgc ggcgagggag
     1201 acgaggtcgg agcggtcgac gtttgccacg atggccgcca gcgggccgtc gccggcgcgg
     1261 cgcaggccct ccacgacctg gtcccaccgg acgtaggtct cgaccgaggc gccggccagg
     1321 tactccatga tctgcgggta gcggtcggcg cccgaggagc ggatgtcgag gccgccggtg
     1381 gtgaggaagc gcacctggcg ccgcccccgg cacatggccg tggccagcga ggcggcgatc
     1441 tccaccgccc gctcgaagga gtcgccctgg tgggtggacg ggcgggtgtc gagcaggatc
     1501 gtcgagcgcg actcccacgg catctcgtcc tgccggagca tcagctcgcc ggtccgggcg
     1561 gtcgaccgcc agtggacccg gcgcaggtcg tcgcccacct cgtactcccg gaggccgaag
     1621 aagtcgagcc cgaccggcac ccgggaggcc tgcatcgacc ccatccgggc ctcgcggctg
     1681 gcggcgcccg ggatcgggag cacgtcctcc accctggggt agacgatgaa ccgctcctcg
     1741 ccggccagcg tcaccccggt ctcgaccacg ccgaaggggt cctggaccga cagcgtgagc
     1801 ggcccgaccc ggtagatccc ccggcgcgcg gtgggcatgc ggtaggcggc gtcggccgtc
     1861 tcccccggcg ccagcggcgg gacgaggaag cgggccaccc gctgcccgcc gtcgaaggag
     1921 tcgacggccg ccagcaccgg tgtcgtccgg ctgccgaggt tcatgaccgt gaggtcggcc
     1981 ctcgccgcgc tgccggcctc ggcccgggcc gggtggagca cccgcccggc ggagatccgg
     2041 aggggttgcc gccgcacccg cacgaaggcc acgacgacga cgaggaaggc cgccgccgcc
     2101 agcatcgaca gctcctgcac gccgaggacc cgggcgccga cgagcagcgc ggcggccgcg
     2161 ccgcacagcg accacccccg gttggtgagg gacgggcgca tcccgacgct cctggccgcc
     2221 acgcgcgccg gcgcccggct acccgccggc cccggcccgg acgctcggca cgggcacctt
     2281 gcccagcacc gaccccagga cgtcggacgc ggtg
//
LOCUS       DATGJT010000178         3670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_749702, whole genome shotgun sequence.
ACCESSION   DATGJT010000178 DATGJT010000000
VERSION     DATGJT010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_749702"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..509)
                     /locus_tag="VKX24_03065"
     CDS             complement(45..509)
                     /locus_tag="VKX24_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HLJ07488.1"
                     /translation="MSASDATAISLADLPGMIGKHLGQSEWHTIDQDQINRFADATGD
                     HQWIHVDVERAKSGPFGTTIGHGYLTLSLVPIFVFQLLKVEGAKLAVNYGLNKVRFPA
                     PVPAGSRVRMGAEVAAVEPVGGGVQVTLSASFEIEGQSKPACVADILFRYYE"
     gene            complement(594..1331)
                     /locus_tag="VKX24_03070"
     CDS             complement(594..1331)
                     /locus_tag="VKX24_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07489.1"
                     /translation="MPETSASRSPSPEMAAAMSRHPASRGRATVTPLFGADGPGGRPA
                     AAVPGPASFAAVVAVLTGPWRVDDPVGFAGAMRAAPLVAGHPVVDLGACTGRPPSGLD
                     PLSAALAAHLETAVAAAAGRSGLAVRWVAARAGADLLVEAAALAEADDEGPELLVLAH
                     LVEPLAGAVVADDSWVVAVVGDGRGGVAGVARSLLDRSAADGRGPIRLRLTALRNRLA
                     GPARAAEGFGPQACEPAREGVVLPFRR"
     gene            1423..3084
                     /locus_tag="VKX24_03075"
     CDS             1423..3084
                     /locus_tag="VKX24_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07490.1"
                     /translation="MSYLPTRLIRAAERGGTITFLSADASDGGQRVEWAVLHEEAKAM
                     AVALGRRGVGPGSHVALLGPTSRPFVTAIQAVWLAGATVVVLPLPMRMSSLEDFVAQT
                     RTRVRAADTSVVVADPMLAGFIQPEPGDPPVVLLDELTGDASDPWAWELPKEDPTALA
                     ILQFTSGSTADPKGVMLPHATICANLDAIAEAARLDPADDVLCSWLPLYHDMGLIGLL
                     TLGMTTGTDLALAAPQDFLAAPARWMEWMSAHRATATAGPNFSYALAARALRRFAPGT
                     LDLSRWRVALNGAEAVDPKAVADFVAAGAPHGLHPGAVFPAFGMAEATLAVTFPDPGR
                     GLRTDPIDRHRLETEAYAAPADPDGETTRHLVLLGRPVPGLEIRIVDPVSGDLRGERE
                     VGELEIRGSSVTTGYYRRPDATEGAFHDGWLRSGDLGYLVDGELVVCGRIKDLIIVGG
                     RNVYPEDVERAAASVEGVRAGNVIAFAVDGRRGKEALVVVAESKDPDLESVRAAVAGR
                     VREVVGLPPEDVVLVEPGTLPKTSSGKLQRSLCRSRYLSAALTSR"
     gene            3157..>3670
                     /locus_tag="VKX24_03080"
     CDS             3157..>3670
                     /locus_tag="VKX24_03080"
                     /inference="COORDINATES: protein motif:HMM:NF019605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ07491.1"
                     /translation="MIAEALAGRRVAVTGATGFLGTALCERLLRCVPECEVLPLVRPG
                     RRAGAAERVRRDILRNDAFDRLRREWGDGFEAEIARRVRPLGGDVSVDGLGLSDDDRR
                     ALSGVDVVIHSAAAVSFDSPLDAAVAVNLLGPSRVAGALRAAGSGAHLVAVSTAYVAG
                     NRRGDAPEALL"
BASE COUNT          433 a         1428 c         1359 g          450 t
ORIGIN      
        1 gcatctcctt ccaggggccc gtggtcggcg cggacggcgg gccgctactc gtaataccgg
       61 aacaggatgt cggccacaca cgccggcttg gactggccct cgatctcgaa gctggcgctc
      121 agcgtgacct gcacgccgcc gccgaccggc tcgacggcgg cgacctcggc gcccatccgc
      181 acccgggagc cggccggcac cggggccggg aaccggacct tgttgagccc gtagttgacg
      241 gcgagcttgg cgccctccac cttgagcagc tggaagacga agatcgggac cagcgacagc
      301 gtcaggtagc cgtggccgat ggtcgtgccg aacggcccgc tcttggcccg ctcgacgtcg
      361 acgtggatcc actggtggtc gccggtggcg tcggcgaagc ggttgatctg gtcctggtcg
      421 atcgtgtgcc actcgctctg cccgaggtgc ttcccgatca tccccggcag gtcggcgagg
      481 ctgatggcgg tggcgtcgct ggcgctcatg gggacccctg tcgctcggtc ggcgggcacc
      541 ggcaacccgc cggcgcgacc acccgagcat aggcggggcg ggccggggct ccctcatcgc
      601 cggaagggca ggaccacccc ctcccgggcc ggttcgcacg cctgcgggcc gaacccctcg
      661 gcggcccggg cgggcccggc cagccggttc cggagggcgg tcagccggag ccggatcggg
      721 ccccggccgt cggccgcgga gcggtcgagc agcgatcggg cgacgccggc gacgccgccc
      781 cgcccgtcgc cgacgaccgc cacgacccag gagtcgtcgg ccaccaccgc ccccgccagc
      841 ggctcgacca ggtgagcgag cacgagcagc tccggcccct cgtcgtcggc ctcggccagg
      901 gcggcggcct cgacgaggag atcggcgccg gcccgggccg ccacccaccg gacggccagg
      961 ccggaccgac cggccgccgc cgccaccgcc gtctccaggt gggcggccag ggcggcgctc
     1021 agcgggtcga gcccgctcgg cggccggccg gtgcaggcgc cgaggtcgac caccgggtgg
     1081 ccggccacga gcggagcggc ccgcatggcg ccggcgaagc cgacgggatc gtcgacccgc
     1141 cagggaccgg tcagcacagc gacgacggcg gcgaaggacg ccggcccggg gacggccgcc
     1201 gccggccgcc cgccggggcc gtcggctccg aacagagggg tgacggtggc ccggccccgc
     1261 gacgccggat ggcgggacat ggccgcggcc atctccgggg aagggcttcg ggaggcggac
     1321 gtctcgggca tgcccgtacc ctacgaaccg gctgtgacag ttaaggggag cgatgacgac
     1381 accttccggt aaccccggcc ccggctccga ggtcggaccc tcgtgagtta cctgccgacg
     1441 cgcctgatcc gcgccgccga gcgtggcggc accatcacgt tcctttcggc cgacgcctcc
     1501 gacggcggcc agcgggtcga gtgggccgtc ctccacgagg aggccaaggc gatggccgtg
     1561 gccctcggcc ggcggggcgt gggcccgggc tcgcacgtgg cgctcctcgg cccgacgtcc
     1621 cggcccttcg tcaccgccat ccaggccgtg tggctggccg gcgccaccgt cgtggtccta
     1681 ccgcttccga tgcggatgag cagcctggag gacttcgtgg cccagacccg cacccgggtg
     1741 cgggccgccg acacgtcggt ggtggtggcc gacccgatgc tggcggggtt catccagccc
     1801 gagcccggcg accccccggt ggtgctgctc gacgagctca ccggcgacgc cagcgacccc
     1861 tgggcctggg agctccccaa ggaggacccc accgccctgg ccatcctgca gttcaccagc
     1921 gggtcgaccg ccgaccccaa gggcgtgatg ctgccccacg ccacgatctg cgccaacctc
     1981 gacgccatcg ccgaggccgc ccggctggac cccgccgacg acgtcctctg cagctggctg
     2041 ccgctgtacc acgacatggg cctcatcggg ctgctgacgc tggggatgac caccggcacc
     2101 gacctggccc tggccgcccc gcaggacttc ctggccgccc cggcccggtg gatggagtgg
     2161 atgtcggcgc accgggccac ggccaccgcc ggcccgaact tctcctacgc cctggccgcc
     2221 cgggccctcc ggcgcttcgc ccccggcacg ctcgacctgt cccgctggcg ggtcgccctc
     2281 aacggcgccg aggccgtcga cccgaaggcg gtggccgact tcgtggccgc cggcgccccc
     2341 cacgggctcc acccgggcgc cgtcttcccg gccttcggca tggccgaggc gacgctggcc
     2401 gtgacgttcc ccgaccccgg ccggggcctg cggaccgacc ccatcgaccg ccaccggctg
     2461 gagaccgagg cctacgccgc cccggccgac cccgacggcg agaccacccg gcacctcgtg
     2521 ctgctgggcc ggcccgtccc cggcctggag atccgcatcg tcgaccccgt cagcggcgac
     2581 ctccggggcg agcgggaggt cggcgagctg gagatccggg gctcctcggt caccactggc
     2641 tactaccgcc ggcccgacgc cacggagggc gccttccacg acgggtggct gcgctccggc
     2701 gacctcggct acctcgtcga cggcgagctg gtcgtctgcg gccgcatcaa ggatctcatc
     2761 atcgtcgggg gccgcaacgt ctaccccgag gacgtcgagc gggccgcggc gtcggtggaa
     2821 ggcgtacggg ccggcaacgt catcgccttc gcggtcgacg ggcggcgcgg caaggaagcg
     2881 ctcgtcgtgg tggcggagtc gaaggacccc gatctggaga gcgtgcgggc ggcggtggcc
     2941 ggccgggtcc gggaggtcgt cgggctcccg ccggaggacg tcgtcctcgt cgagccgggg
     3001 acgctgccga agacgtcgtc gggcaagctc cagcgttcgc tgtgccggtc ccgctatctc
     3061 agcgcggcgc tgacgtcccg ctgaggggcc gttccgggcc ccctgaatgc tagaaacggc
     3121 cccgatgccg ctccccgcgt ctcaacaccg ccgccggtga tcgccgaagc gctggccggc
     3181 cggcgcgtcg ccgtcactgg ggccaccggg ttcctgggga cggcgctctg cgagcggctc
     3241 ctccgctgcg tccccgagtg cgaggtgctg ccgctggtgc ggccggggcg gcgggccggg
     3301 gcggccgagc gggtccggcg cgacatcctc cgcaacgacg ccttcgaccg gctccggcgg
     3361 gagtggggcg acggcttcga ggccgagatc gcccgccggg tccggccgct gggcggcgac
     3421 gtctccgtcg acggcctcgg gctgtccgac gacgaccgcc gggcgctttc cggcgtcgac
     3481 gtcgtcatcc actccgccgc cgccgtctcc ttcgactcgc cgctcgacgc cgccgtggcc
     3541 gtcaacctgc tcggcccctc ccgggtggcg ggcgcgctgc gggcggcggg ctccggtgcc
     3601 cacctcgtgg ccgtgtcgac ggcctacgtg gccggcaacc gccggggcga cgccccggag
     3661 gcgctgctgg
//
LOCUS       DATGJT010000179         2715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_336119, whole genome shotgun sequence.
ACCESSION   DATGJT010000179 DATGJT010000000
VERSION     DATGJT010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336119"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..374
                     /locus_tag="VKX24_03085"
     CDS             66..374
                     /locus_tag="VKX24_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07492.1"
                     /translation="MESGIEEAYGEEPDGRLHGCPACSVTWFGVDARCWVCGRAVEGP
                     VLAVPPNGSHSWSAARCIDTADDEETAAFLRRMLEATEGEAGVGSGGIGGMVLPVLGS
                     "
     gene            complement(330..1208)
                     /locus_tag="VKX24_03090"
     CDS             complement(330..1208)
                     /locus_tag="VKX24_03090"
                     /inference="COORDINATES: protein motif:HMM:NF014016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin chelatase"
                     /protein_id="HLJ07493.1"
                     /translation="MTAAGAEGLLLVGHGSRSAAGAGEMLAIASLVADALPGVAVDAG
                     FLEMTDPPAGPVLDRLAAAGCRRIVVLPLVLLGAGHAKSDVPAVVLEGRARHPGVHVH
                     LGSPLGISRHLVGLLGGALLAAGGSGLPLLLVARGTSDPDANGDAHKVSRLLGEWTGA
                     PFVHTAFTGVAEPSVAAGLEVFARLGYRRMAVAFWFLCTGVLVERARADIGAFAATGV
                     EVVDAGYLGPDPRVVPPIVERYEEAVRGVAAVNCDLCSYRAPWPGREGRRGQPIGVGH
                     SHLAAEHRQHHSTDPA"
     gene            complement(1205..1990)
                     /locus_tag="VKX24_03095"
     CDS             complement(1205..1990)
                     /locus_tag="VKX24_03095"
                     /inference="COORDINATES: protein motif:HMM:NF021039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HLJ07494.1"
                     /translation="MWKRFDPSRPLAVIVGAVVAGVVAGLLASVLLTFTAEPVIDRAI
                     ALEGAHQAQEPNAAVEPEIVARSTQKGVGRFAAYGLGGGAYGVLFGIAFLALRRRTGV
                     FDRALLAGGLLAGAFTVMPFLKYPPNPPGVGDPATLSERQWKYLALIFLSLVILAGAA
                     RLSGRLRQRRWADDERRIAVGLAVVVPLGVICAALPPFHDAVDVPANLLWRFRMASLG
                     GNLLLWAVLTAGFGAAAVRRERELAAPVPEGAAGGAFRPATSA"
     gene            complement(2017..2220)
                     /locus_tag="VKX24_03100"
     CDS             complement(2017..2220)
                     /locus_tag="VKX24_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005244942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB-domain containing protein"
                     /protein_id="HLJ07495.1"
                     /translation="MSTIKAAARTTAVNVPPWAGLVMALALGLLYAVTFDTGALSSHV
                     ASSSMYLHELFHDGRHLLGVPCH"
     regulatory      complement(2278..2401)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            2458..>2715
                     /locus_tag="VKX24_03105"
     CDS             2458..>2715
                     /locus_tag="VKX24_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinic acid a,c-diamide synthase"
                     /protein_id="HLJ07496.1"
                     /translation="MTSPAPLGPRLVVAGTHSGVGKTTVATGLLAALRRAGHRPAGAK
                     VGPDFIDPGYHALACGRPPRNLDAWLCGAEAIPALAGRAAAG"
BASE COUNT          375 a         1012 c         1042 g          286 t
ORIGIN      
        1 tccaccgcga ctcctagccc gcaagccggc ggaaccgccg gccgacgggg agtagcgtgg
       61 gggcggtgga atcgggcatc gaagaggcct acggcgagga gccggacggg cgcttgcacg
      121 gctgtcccgc ctgcagcgtc acgtggttcg gcgtcgacgc ccggtgctgg gtctgcggcc
      181 gggccgtcga gggcccggta ctggccgtcc cgccgaacgg atcgcactcc tggtcggccg
      241 cccggtgcat cgacaccgcc gacgacgagg agacggccgc cttcctccgc cggatgctgg
      301 aggccaccga aggcgaggcc ggcgtcggat caggcgggat cggtggaatg gtgctgccgg
      361 tgctcggcag ctaggtgtga gtggccgacg ccgatgggct gtccccggcg gccctcccgg
      421 cccggccacg gcgcccggta gctgcagagg tcgcagttga cggcggcgac gcctcgcacc
      481 gcctcctcgt aacgctcgac gatcggaggg acgacccggg ggtccgggcc gaggtacccg
      541 gcgtcgacca cttcgacgcc ggtggcggcg aaggcgccga tgtcggcccg ggcccgctcg
      601 acgaggacgc cggtgcagag gaaccagaag gccacggcca tgcgccggta gccgagccgg
      661 gcgaagacct cgagccccgc ggcgacgctg ggctcggcga cgccggtgaa ggcggtgtgg
      721 acgaacggcg cgccggtcca ctcccccagc agccgggaaa ccttgtgggc gtcgccgttg
      781 gcgtcggggt ccgacgtccc ccgggccacc agcagcagcg gcagcccgga cccgccggcg
      841 gccagcagcg ctccgccgag caggccgacg aggtggcggg agatcccgag cgggctgccg
      901 aggtggacgt ggacgccggg gtgccgcgcc cgaccctcga gcaccacggc cggcacgtcg
      961 ctcttggcgt ggcccgcccc gagcagcacc agcggcagca ccacaatccg gcggcagccg
     1021 gcggcggcca ggcggtcgag gaccggcccg gccgggggat cggtcatctc caggaatccg
     1081 gcgtcgacgg cgacgccggg gagggcgtcg gcgaccagcg aggcgatcgc cagcatctcg
     1141 ccggcgccgg cggccgaccg ggacccgtgg ccgacgagca gcaggccttc cgccccggcg
     1201 gcggtcacgc agaggtcgcc ggacggaagg cgccgccggc cgcgccctcg ggcaccggag
     1261 cggccagctc ccgctcccgg cgcacggccg ccgccccgaa gccggcggtc agcacggccc
     1321 acaacaggag gttcccgccc agcgaggcca tccggaaccg ccacaggagg ttggccggca
     1381 cgtcgacggc atcgtggaac ggcggcagcg cggcgcagat gaccccgagc ggcacgacca
     1441 cggccagacc cacggcgatg cgccgctcgt cgtcggccca gcggcgctgt cgcagccggc
     1501 ccgacagccg ggcggcgccg gccaggatca ccagcgacag gaagatcagc gccaggtact
     1561 tccactggcg ttcgctgagc gtcgccgggt cgccgacgcc gggcgggttc ggcgggtact
     1621 tgaggaacgg catgacggtg aaggccccgg ccagcaggcc cccggccagc agcgcccggt
     1681 cgaagacgcc cgtccggcgg cgcagggcga gaaaggcgat cccgaacagg acgccgtagg
     1741 cgccgccgcc caggccgtag gcggcgaagc ggccgacgcc cttctgggtc gagcgggcca
     1801 cgatctccgg ctcgacggcg gcgttgggct cctgggcctg atgggcccct tcgagggcga
     1861 tggcccggtc gatgaccggc tcagcggtga aggtcagcag caccgaggcc agcagcccgg
     1921 ccacgacccc ggccacgacg gcgccgacga tcacggccag cgggcgcgac ggatcgaagc
     1981 gcttccacat ggcggcctcc cgggatgacg cggccgctag tggcagggga cgccgagcag
     2041 gtgccgcccg tcgtggaaca gctcgtggag gtacatgctc gagctggcca cgtgcgacga
     2101 cagcgcgccg gtgtcgaacg tcacggcgta gagcagcccg agcgccagcg ccatgaccag
     2161 ccccgcccag gggggcacgt tgacggcggt ggtgcgggcc gcagccttga tcgtcgacat
     2221 cgagagcctc ctccatcctc gtggtgggaa cggggtgggc ccccgttcca tcgcggccgg
     2281 tctcctggct ccgtatcaac gctcgcctcg ccttcccggg ccggggggcc cagtggcgtc
     2341 cgtgaggtcc gctacccggt cacagtggcg ggaccgcgcc ggattcgcac cggcttcccg
     2401 tccgcgacgg gcgacactct aaccgtgggc ccccggcggc gctacgttcg gcgggcgatg
     2461 acgtcccctg cgccgctcgg cccccggctc gtggtggccg gcacccattc cggcgtgggc
     2521 aagacgacgg tggccaccgg cctgctggcc gccctgcggc gggccggcca ccggccggcc
     2581 ggagccaagg tcggccccga cttcatcgac cccggctacc acgccctggc ctgcggaagg
     2641 ccgccccgga acctcgacgc ctggctgtgc ggcgccgagg ccatcccggc gctggccggg
     2701 cgggccgccg ccggc
//
LOCUS       DATGJT010000180         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_128472, whole genome shotgun sequence.
ACCESSION   DATGJT010000180 DATGJT010000000
VERSION     DATGJT010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128472"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..1351
                     /gene="ccrA"
                     /locus_tag="VKX24_03110"
     CDS             11..1351
                     /gene="ccrA"
                     /locus_tag="VKX24_03110"
                     /EC_number="1.3.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043880 - crotonyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HLJ07497.1"
                     /translation="MDDILQAVIDGAPAETLADLPIPESYRAAFVRRDEAEMFQGMDS
                     AEKDPRKSLHVGDVPLPELAPDEAYVAVMASAINFNTVWTSIFEPLPTFGFLDRLGRE
                     SRWGARHALDYHIVGSDASGVVLRTGSAVRNWKTGDRVTVHCNFVDDQDPSAHDDSML
                     AANQRIWGFESNFGGLADIALVKANQLMPKPRHLSWEEAAVNALCNSTAYRMLVSRNG
                     VSMRQGDRVLVWGATGGLGSFAVQYVLNGGGIPVGVVSSPDKVDLLHDLGVEAVIDRK
                     AADYQFWKDEFHQDEAEWRRLGKDIRNLVGDDPDIVFEHPGRSTMGASVFVAKRGGTV
                     VTCAATSGYMIEYDNRHLWMKLKTIKGSHFANYREAWDANQLVCEGKILPPLSAVYPL
                     AEVGEATLQVHKNLHEGKIGVLCLAPEEGLGIDDPELRAKVGEERITLFRRHGA"
     gene            1348..1770
                     /gene="mce"
                     /locus_tag="VKX24_03115"
     CDS             1348..1770
                     /gene="mce"
                     /locus_tag="VKX24_03115"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HLJ07498.1"
                     /translation="MSAADAPGLFTEVDHVAIAVNDLDAAAAFYERSFGATVVHREVV
                     ESDGVEEALIKVADSYVQLLTPTSEDSPVGRFLVQRGEGLHHVAFRVEDCAAALDAAR
                     AAGVRLIDDAPRPGSRGTTVAFVHPKGAYGTLIELVQE"
     gene            1828..>2145
                     /locus_tag="VKX24_03120"
     CDS             1828..>2145
                     /locus_tag="VKX24_03120"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ07499.1"
                     /translation="MITVRAMQPEDFDGWGRLWLGYLRFYRSESEVPDQTTADTFDRL
                     ATGRDGFAGRVAVDEHGGLVGLAHMVFHPSTWATAPSCYLEDLFVAPAARGTGAAAAL
                     IDAV"
BASE COUNT          321 a          773 c          749 g          302 t
ORIGIN      
        1 gtctcgaccc atggacgaca tcctccaggc cgtgatcgac ggcgccccgg ccgagaccct
       61 ggccgacctc ccgatccccg agtcctaccg ggcggccttc gtccgccggg acgaggccga
      121 gatgttccag ggcatggact cggcggagaa ggacccccgc aagtccctgc acgtgggcga
      181 cgtcccgctg cccgagctgg cgccggacga ggcctacgtc gccgtgatgg cctcggccat
      241 caacttcaac accgtatgga cctcgatctt cgagccgctg ccgaccttcg gcttcctcga
      301 ccgcctcggc cgggagagcc gctggggggc ccgccacgcg ctcgactacc acatcgtcgg
      361 ctcggacgcc tcgggggtgg tgctgaggac cggctcggcc gtgcggaact ggaagaccgg
      421 cgaccgggtc acggtccact gcaacttcgt cgacgaccag gacccgagcg cgcacgacga
      481 ctcgatgctg gcggccaacc agcgcatctg gggcttcgag tccaacttcg gcgggctggc
      541 cgacatcgcg ctggtgaagg ccaaccagct catgccaaag ccccggcacc tgagctggga
      601 ggaggcggcg gtcaacgcac tgtgcaactc gacggcctat cgcatgctcg tctctcggaa
      661 cggtgtctcg atgcgccagg gcgaccgggt actggtgtgg ggcgccaccg gcggcctcgg
      721 ctccttcgcg gtgcagtacg tgctcaacgg cggcgggatc cccgtcggcg tggtgtcctc
      781 accagacaag gtcgacctcc tgcacgacct cggcgtcgag gcggtgatcg accgcaaggc
      841 ggccgactac cagttctgga aggacgagtt ccaccaggac gaggccgagt ggcgccgcct
      901 cggcaaggac atccgcaacc tcgtcggcga cgaccccgac atcgtcttcg agcaccccgg
      961 gcgctcgacc atgggcgcgt cggtgttcgt ggccaagcgg ggcggcaccg tcgtgacctg
     1021 cgcggccacc tccggttaca tgatcgagta cgacaaccgg cacctctgga tgaagctcaa
     1081 gacgatcaag ggctcgcact tcgccaacta ccgcgaggct tgggacgcca accagctcgt
     1141 gtgcgagggc aagatcctgc cgccgctctc ggccgtctac ccgctcgccg aggtggggga
     1201 ggcgacgctc caggtccaca agaacctgca cgaggggaag atcggcgtgc tctgtctcgc
     1261 ccccgaggag gggctcggca tcgacgaccc cgagctgcgg gcgaaggtcg gcgaggagcg
     1321 catcaccctc ttccggaggc acggggcatg agcgccgccg acgctcccgg cctcttcacc
     1381 gaggtcgacc acgtggccat cgccgtcaac gacctcgacg ccgcggccgc cttttacgag
     1441 cggagcttcg gggccacggt ggtccaccgg gaggtcgtcg agtccgacgg cgtcgaggag
     1501 gccctcatca aggtggccga ctcctacgtc cagctcctca cgccgacgag cgaggactcg
     1561 ccggtgggcc ggttcctggt ccagcgcggc gagggcctgc accacgtcgc cttcagggtc
     1621 gaggactgcg cggccgcgct cgacgccgcc cgcgccgccg gcgtgcgcct catcgacgac
     1681 gcgccgcggc ccggctcgcg gggcacgacc gtcgccttcg tgcacccgaa gggcgcctac
     1741 gggacgctca tcgagctcgt ccaggagtag ccgggtcccg gcgcaggcgc cggccgcggt
     1801 cgatgggacc gagaggggga ggggtccgtg atcacggtcc gggcgatgca acccgaggac
     1861 ttcgacggct ggggtcgact gtggctcggc tacctccgct tctaccggag cgagtcggag
     1921 gtgccggacc agaccacggc cgacaccttc gaccgcctgg ccaccggccg cgacggcttc
     1981 gccgggcggg tcgccgtcga cgagcacggc gggctggtcg gactggcgca catggtgttc
     2041 catccgtcca cctgggcgac ggcgccgtcc tgctatctcg aggacctctt cgtggcgccc
     2101 gcggcccggg ggacgggcgc cgccgccgcg ctcatcgacg cggtg
//
LOCUS       DATGJT010000181         3095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_438406, whole genome shotgun sequence.
ACCESSION   DATGJT010000181 DATGJT010000000
VERSION     DATGJT010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3095
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438406"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..820)
                     /locus_tag="VKX24_03125"
     CDS             complement(170..820)
                     /locus_tag="VKX24_03125"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HLJ07500.1"
                     /translation="MTKQHIIFYGCLVVAVILHEISHGVVAYAYGDDTAKRAGRLTLN
                     PVPHIDPLGSIILPAMAVLANLPVLGWAKPVPVNPARLRNPRRQMLIVGLAGPLTNFG
                     LMVAAAVPAKIILAGTYPGACTGTLVDPRVSLTGDILASFAVVNLLLGLFNLLPIPPL
                     DGSSLIERLLPARYLPTWWKFRPYGFLVLFLGLFWFNFFGRILSPFFGDLCRYLVR"
     gene            complement(817..1152)
                     /locus_tag="VKX24_03130"
     CDS             complement(817..1152)
                     /locus_tag="VKX24_03130"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HLJ07501.1"
                     /translation="MADVTNATQRAQLEEERARIRSQLEQMGHFGTGLSFDEGFADSG
                     QVTAERGEVEALAQTLVETLTEVEHALEKFDMGTYGVCEQCGAPIPEARLEAKPAARL
                     CIDCASARR"
     gene            complement(1165..2136)
                     /gene="xerD"
                     /locus_tag="VKX24_03135"
     CDS             complement(1165..2136)
                     /gene="xerD"
                     /locus_tag="VKX24_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017591282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HLJ07502.1"
                     /translation="MLAEHATWLAVERGLAANTLAAYRRDLAAYAGFVRRRAGGGAVD
                     VGRLTEADVEAYVEHLKAAAGEDGKPRWSAASVARAVVAVRSFHRFCLAEGHVAVDPS
                     EDVAAPRVPQGIPKALTEAEVEALLAAVTGDGPAALRDRAILETLYACGLRISELVGL
                     DVGAVDLEEGFLRAFGKGSKERIVPIGHTAAAAIEAWLPARAAVLARARRGRADPDAL
                     FVNPRGGRLTRQGCWQIVAAHGLRAGLGGRLSPHVLRHSCATHMVDRGADLRVVQELL
                     GHASVSTTQIYTKVTQSRLRAVYDAAHPRAKLQHRPTLAVPSAGRGA"
     gene            complement(2174..>3095)
                     /gene="ald"
                     /locus_tag="VKX24_03140"
     CDS             complement(2174..>3095)
                     /gene="ald"
                     /locus_tag="VKX24_03140"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011933903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HLJ07503.1"
                     /translation="RGEVICKVKEPQSAEFEFMREGQVLFTYLHLAAYPQVGRALLER
                     RVTGIAYETVQLPSGALPLLAPMSEVAGRMAPQIGAHFLERHNGGRGVLLGGAPGVRP
                     ARVVVLGAGNVGWNAAWIAAGMEAEVAILDRNLDRLRWVDQIHRGRILTLASNRGAVE
                     RSVTEADMVVGAVLVPGGRAPMLVTDDMVRAMRPGALIVDVAIDQGGCIETSHETTHA
                     DPVFELYGVLHYCVGNVPGAVPHTSTYALANATLPYLVEIATQGPERAVSTDRALAGG
                     LNTLSGQVVNPAVAEALHLPATPFADLWGG"
BASE COUNT          429 a         1088 c         1197 g          381 t
ORIGIN      
        1 gtggcgccga tcgtggcccg gctgacgggc ccagagggcg tactcctccg gttccaggac
       61 agcctccacc caggcccggt cggcctcgga cgggcccccc ggccgcagcg cccccacgaa
      121 ccggcgggcc aggtgacccc agggttcccg gcgcccgctc atcccccgct cacctcacca
      181 ggtaccggca gaggtccccg aagaacgggc tgaggatccg cccgaagaag ttgaaccaga
      241 acaggccgag gaagagcacc aggaacccgt agggccggaa cttccaccac gtcgggaggt
      301 accgggccgg gagcagccgc tcgatcagcg acgacccgtc gagtggaggg atcggcagca
      361 ggttgaacag cccgagcagc aggttcacga cggcgaagct ggccaggatg tcgccggtga
      421 ggctcacccg ggggtcgacc agggtgccgg tgcaggcgcc cggatacgtg ccggccagga
      481 tgatcttggc cggcacggcg gccgccacca tcagcccgaa gttggtcagc gggccggcca
      541 ggccgacgat cagcatctgc cggcgggggt tgcgcagccg ggccgggttg accggcacgg
      601 gcttggccca cccgagcacc ggaaggttgg ccagcacggc catggccggc aggatgatcg
      661 accccagcgg atcgatgtgg gggaccgggt tcagcgtgag gcgaccggcc cgcttggcgg
      721 tgtcgtcgcc gtaggcgtag gccacgacgc cgtggctgat ctcgtgaagg atgacggcca
      781 cgacgaggca gccgtaaaag atgatgtgct gcttggtcac cggcgcgccg aagcgcagtc
      841 gatgcagagc cgggccgccg gcttggcctc caggcgggcc tcggggatgg gggcgccgca
      901 ctgctcgcag acgccgtagg tgcccatgtc gaacttctcg agggcgtgct cgacctcggt
      961 cagggtctcc accagcgtct gggccagtgc ctcgacctcg ccccgctcgg cggtcacctg
     1021 tcccgagtcg gcgaagccct cgtcgaacga cagaccggtg ccgaagtgac ccatctgctc
     1081 gagctgcgac cggatccggg cgcgttcctc ttcgagttgg gcgcgttgag tcgcgttggt
     1141 cacgtcggcc atagacggtg gagtctaggc gccgcgacca gcggagggga ctgccagcgt
     1201 cggccgatgc tgcaacttcg cccgggggtg ggcggcgtcg tagaccgccc gcagccggga
     1261 ctgggtgacc ttggtgtaga tctgcgtggt cgagacgctg gcgtggccga ggagctcctg
     1321 gaccacccgg aggtcggcgc cccggtcgac catgtgggtg gcgcaggagt ggcgcagcac
     1381 gtggggcgac aggcgcccgc cgagccccgc ccgcagcccg tgggcggcga cgatctgcca
     1441 gcagccctgc cgggtcaggc ggccgccccg ggggttgacg aacagggcgt cggggtcggc
     1501 ccggccccgg cgggcccggg ccaggacggc ggcccgggcc gggagccagg cctcgatggc
     1561 cgccgcagcg gtgtggccga tcggcacgat ccgctccttg gagcccttcc cgaacgcccg
     1621 gaggaagcct tcctcgaggt cgacggcgcc gacgtcgagg ccgacgagct ccgagatccg
     1681 caggccgcag gcgtagagcg tctccaggat ggcccggtcc cggagcgccg ccgggccgtc
     1741 gccggtgacg gcggcgagga gcgcctcgac ctcggcctcc gtgagggcct tcgggatccc
     1801 ctgcggcacg cggggggcgg cgacgtcctc gctggggtcg acggcgacgt ggccctcggc
     1861 caggcagaag cggtggaagg agcggaccgc caccacggcc cgggccaccg aggcggccga
     1921 ccagcgcggc ttgccgtcct cgccggcggc cgccttcagg tgctcgacat aggcctcgac
     1981 gtcggcttcg gtcagccggc cgacgtcgac ggcgccgccg cccgcccggc ggcgcacgaa
     2041 cccggcatag gcggcgaggt cccgccggta ggcggccagc gtgttggccg ccagcccccg
     2101 ctcgacggcg agccaggtgg cgtgctcggc cagcagccgg tcgagctcgg cgccgggcgc
     2161 gggctcggcc gtctcagccg ccccagaggt cggcgaaggg ggtcgccggg aggtggaggg
     2221 cctcggcgac ggccgggttg accacctggc ccgagagcgt gttgagccct ccggccagcg
     2281 cccggtcggt cgagacggcc cgctccgggc cctgggtggc gatctccacc aggtagggca
     2341 gcgtggcgtt ggccagggcg taggtcgacg tgtgggggac ggcgccgggg acgttgccga
     2401 cgcagtagtg cagcaccccg tagagctcga agaccgggtc ggcgtgggtc gtctcgtgcg
     2461 acgtctcgat gcagccgccc tggtcgatgg cgacgtccac gatcagggcg ccgggccgca
     2521 tggcccggac catgtcgtcg gtcacgagca tgggggcccg gccgcccggg acgaggacgg
     2581 cgccgacgac catgtcggcc tcggtgaccg aacgctcgac ggcgccccgg ttggaggcca
     2641 gcgtcaggat ccggccccgg tggatctggt cgacccagcg gagccggtcg aggttgcggt
     2701 cgaggatggc gacctcggcc tccatgcccg ccgcgatcca ggcggcgttc cagccgacgt
     2761 tgccggcgcc gaggacgacg acgcgggccg gccggacgcc gggggcgccg ccgaggagga
     2821 cgccccgccc gccgttgtgc cgctccagga agtgggcgcc gatctggggc gccatccggc
     2881 ccgccacctc gctcatcggg gccagcagcg gcagggcccc cgagggcagc tggacggtct
     2941 cgtaggcgat ccccgtcacc cgccgctcga ggagcgcccg gcccacctgc gggtaggcgg
     3001 cgaggtggag gtaggtgaag aggacctgcc cttcccgcat gaactcgaac tccgccgact
     3061 gcggctcctt caccttgcag atgacctcgc cgcgg
//
LOCUS       DATGJT010000182         2691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_128737, whole genome shotgun sequence.
ACCESSION   DATGJT010000182 DATGJT010000000
VERSION     DATGJT010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128737"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..1218)
                     /locus_tag="VKX24_03145"
     CDS             complement(154..1218)
                     /locus_tag="VKX24_03145"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhN family protein"
                     /protein_id="HLJ07504.1"
                     /translation="MTAEAFEPGGPDPAVAAGLPSSSRRRRVFHAVRIVIGLGLAALA
                     LYVVAGHSGEITGATALLEHAHWAWLVLAVPAEAASIVAYAALEGRLLRAGAAPIPLG
                     PLLQITLAGNAIQNSLPAGPAWAAGFAFGQFRRRGADAVLATWTLVATGFLSGAALVV
                     LTVCGVAAAAGQATTNDLVGGVAIVAAVAVGIVVAVRLGLHARWVPAVLTLGVRLSQK
                     LVHRPERDAAAVVGTALKRLTAVRPGARDWVVAGSWGVSNWLLDCTCLALAFPSVGAG
                     VPWRGLLLAYGAGQLAANLPITPGGLGAVEGSLTVALVAYGGGRIATVAAVLMYRIIS
                     FWLLLVVGWLTWLYLRWRGA"
     gene            complement(1215..2159)
                     /locus_tag="VKX24_03150"
     CDS             complement(1215..2159)
                     /locus_tag="VKX24_03150"
                     /inference="COORDINATES: protein motif:HMM:NF038012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLJ07505.1"
                     /translation="MSPGAVAVAGAVFRTPHHLHRVLATQFTVVALSLAAAFLYALTS
                     VLQHRAMRVIPHERSMRPRMLLDLLRQPRWLLTNVVDAGGYVLQFLALRAGSLVAVET
                     LLVTGLLFAMPLGAAASHRRPQRLDWLATVAVVGGLCGFLVAGRPVTGAGNTSRDGWI
                     ITAVASGVLVAVLVALAERGSQRWKAPALGAATGVVFGLTAALAKASGHLLDRGVVHT
                     LESWQPYALVALAAFGVLASQSAFQAGPLQASLPVLTITEPLVAAVIGVAAFHEHIAT
                     HGARALAETAAALVLAAGVVFLARSPLVAGVAEETRAP"
     gene            complement(2175..>2691)
                     /locus_tag="VKX24_03155"
     CDS             complement(2175..>2691)
                     /locus_tag="VKX24_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020462976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HLJ07506.1"
                     /translation="DLGWRATFFMLGRMVDADPGLAREVADAGHEIALHGYDHVSHLR
                     RRPGAVGEDLRRGLDALSGATGRRPVWFRPPYGHVSSGTVLAARRLGLRTVLWTAWGR
                     DWTATATPATVARTVHRGLRPGGTVLLHDSDCTSAPGAWHAGLGALPRLAELVADRGD
                     MAVGPLGDHAV"
BASE COUNT          399 a          999 c         1060 g          233 t
ORIGIN      
        1 tgacggtgtt ccgggccagg ggcagggccc ggaagcactg gctggtggcg gtgttgagcg
       61 agttgcgggg accgccgcag gcggccagcg ccgccagggc gacggcggcg acggcgaccc
      121 ggaacggccg gcggtggcgg acagcgacgg cgctcatgcg cccctccaac gcaggtacag
      181 ccacgtgagc cacccgacga ccagcagcag ccagaacgag atgatccggt acatgaggac
      241 ggcggcgacg gtggcgatcc ggccgccacc gtaggccacg agggccaccg tcaggctgcc
      301 ctcgacggcg cccaggcccc cgggcgtgat cggcaggttg gcggccagct gcccggcgcc
      361 gtaggccaac agcaggcccc gccacggcac gccggccccg acgctgggga aggccagggc
      421 gaggcaggtg cagtcgagca gccagttcga gacgccccag ctcccggcca cgacccagtc
      481 ccgggcgccg gggcggacgg ccgtcaggcg cttcagggcc gtaccgacga cggctgcagc
      541 gtcgcgctcc gggcggtgga cgagcttctg cgagaggcgg acccccagcg tgaggacggc
      601 cggcacccag cgggcgtgga gcccgagccg gacggcgacg acgatgccca ccgccaccgc
      661 ggccacgatc gccacgccgc cgacgaggtc gttggtggtg gcctggccgg cggcggcggc
      721 aacgccgcag acggtcagga cgacgagcgc cgcgccgctg aggaagccgg tggcgaccag
      781 cgtccaggtg gccagcacag cgtcggcgcc ccggcggcgg aactggccga aggcgaaccc
      841 cgccgcccag gccggaccgg ccggaagcga gttctggatg gcgttgccgg ccagcgtgat
      901 ctggagcagc ggcccgagcg ggatcggcgc cgcccccgcc cgcagcagcc gcccctcgag
      961 ggcggcgtag gccacgatcg acgccgcctc ggcgggaacg gcgaggacca gccaggccca
     1021 gtgggcgtgc tcgagcagcg ccgtggcccc ggtgatctcg ccgctgtgcc cggccaccac
     1081 gtagagggcc agcgccgcca gcccgagccc gatgacgatc cgcaccgcat ggaagacgcg
     1141 ccgacgccgg gacgaggacg ggaggccggc ggcgacggcg ggatcggggc cgccgggctc
     1201 gaacgcctcg gcggtcacgg cgcccgggtc tcctcggcga cgccggccac cagcggagag
     1261 cgggccagga acaccacccc cgccgccagc accagcgccg ccgccgtctc ggccagcgcc
     1321 cgggcgccgt gggtggcgat gtgctcgtgg aaggcggcga caccgatgac cgcggccacc
     1381 agcggttcgg tgatcgtcag cacggggagc gaggcctgga gcggcccggc ctggaaggcg
     1441 ctctgcgacg ccagcacccc gaaggcggcc agcgccacga gggcgtaggg ctgccacgac
     1501 tccagcgtgt ggacgacgcc gcggtcgagc agatggcccg atgccttggc cagcgccgcc
     1561 gtgagcccga acaccacgcc ggtggcggcg ccgagcgccg gggccttcca ccgctgcgaa
     1621 ccgcgctcgg ccagggccac gaggacggcg acgaggacgc cggacgccac ggcggtgatg
     1681 atccacccgt cgcgtgacgt gttcccggcg ccggtcaccg gccggccggc cacgaggaac
     1741 ccgcacaggc cgccgacgac ggccaccgtc gccagccagt ccagccgctg cggccgccgg
     1801 tggctggccg ccgctcccag cggcatggcg aagagcagcc cggtgacgag cagcgtctcc
     1861 accgccacca gcgatcccgc ccgcagggcc aggaactgca ggacgtagcc gccggcgtcc
     1921 accacgttgg tgaggagcca gcggggttgg cggagcagat cgagcagcat cctcggccgc
     1981 atcgaccgct catgggggat cacccgcatg gcgcggtgct ggagcaccga cgtgagggcg
     2041 tagaggaacg ccgccgccag gctcagggcg acgacggtga actgggtggc gaggacccgg
     2101 tggaggtggt ggggcgtccg gaagaccgcg cccgccaccg ccaccgcgcc ggggctcatc
     2161 cccgccacgg cgcctcacac ggcatggtcg cccagcggcc cgacggccat gtcaccgcgg
     2221 tcggcgacga gctcggcgag gcgggggagg gcgccgaggc cggcgtgcca ggcgcccggc
     2281 gccgaggtgc agtcggagtc gtggaggagg acggtcccgc cgggccgcaa accccggtgc
     2341 accgtccggg ccacggtggc cggcgtggcg gtggcggtcc agtcgcggcc ccaggccgtc
     2401 cacagcaccg tccgcagccc gaggcggcgg gcggcgagca ccgtgcccga cgagacgtgc
     2461 ccgtagggcg gccggaacca caccgggcgc cggccggtgg cgcccgacag cgcgtcgagg
     2521 ccccgccgga ggtcctcgcc caccgcaccg ggcctccggc ggagatgcga gacgtggtcg
     2581 tagccgtgga gggcgatctc gtggccggcg tcggccacct cccgggccag gccggggtcg
     2641 gcgtcgacca tgcggccgag catgaagaac gtggcccgcc agccgaggtc g
//
LOCUS       DATGJT010000183         2670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_957299, whole genome shotgun sequence.
ACCESSION   DATGJT010000183 DATGJT010000000
VERSION     DATGJT010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_957299"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VKX24_03160"
     CDS             complement(<1..279)
                     /locus_tag="VKX24_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HLJ07507.1"
                     /translation="MSPDRSALAGRRVVLGVSGGIAAYKAVEVCRRLVDAGAHVMPVL
                     TAGATRFVGPLTFSALASEPARTSLFEGPEPIPHTRLGQTCDLVVVAPA"
     gene            complement(300..545)
                     /gene="rpoZ"
                     /locus_tag="VKX24_03165"
     CDS             complement(300..545)
                     /gene="rpoZ"
                     /locus_tag="VKX24_03165"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HLJ07508.1"
                     /translation="MHPLLENLTDRVDSKFTLVSLAAKRARQINSYFNQLGEGLGTIV
                     PPQVTSLSRKPLSISLEEIEVGKIVYERPEVVERSIK"
     gene            complement(570..1136)
                     /gene="gmk"
                     /locus_tag="VKX24_03170"
     CDS             complement(570..1136)
                     /gene="gmk"
                     /locus_tag="VKX24_03170"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009381365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HLJ07509.1"
                     /translation="MGVLLVLSGPSGAGKGTVAARLLAREPGLWLSVSATTRPARPGE
                     VDGRDYVFLDRATFEKWQEHDEFVESFEVFGHFYGTPKRPMVDHLAAGDDVLLEIDVQ
                     GAMAVRKAFPDALLVFLRPPSREVQRERLLARAGDALDTIERRLAKADAEEAMAAEFD
                     LVVVNDDLEAAVDQVAATLEARRTSSGD"
     gene            complement(1140..1457)
                     /gene="mihF"
                     /locus_tag="VKX24_03175"
     CDS             complement(1140..1457)
                     /gene="mihF"
                     /locus_tag="VKX24_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020015403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor, actinobacterial type"
                     /protein_id="HLJ07510.1"
                     /translation="MPLPPSLDPAQRQAALEKAAAARRQRAELKEKLKAGSISLGELL
                     NQGDTDDAVAKLKVVTVLESLPGVGKVKARRTMEELEISENRRVRGLGTHQRRALLEH
                     FER"
     gene            complement(1638..2351)
                     /gene="pyrF"
                     /locus_tag="VKX24_03180"
     CDS             complement(1638..2351)
                     /gene="pyrF"
                     /locus_tag="VKX24_03180"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013376942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HLJ07511.1"
                     /translation="MVSAGDAAPSARERLALALDVDDLSAAVKLADRLDPWFGVVKIG
                     LELFAGSGPAAVEALTAPGRRVFLDLKLHDIPTTVEKAGRQIGRLGAGFVTLHASGGV
                     DMLRAGVAGLAAGAADAGAGDPPVALGVTVLTSDPDAAAFPARLDAAAAGGCGGVVCS
                     VRELPAVKERSSLLAVVPGIRLPGGASHDQARVGTPAEAIAAGADLLVVGRAVTAASD
                     PESAAAAISAMLDPRLSRP"
     gene            complement(2345..>2670)
                     /locus_tag="VKX24_03185"
     CDS             complement(2345..>2670)
                     /locus_tag="VKX24_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013259669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HLJ07512.1"
                     /translation="AIDAETRRPRLGAGGGGLSGPAIKPVALRAVADVARALPGTPII
                     GTGGVRTGLDAVEMLLAGASAVGVGTATFFDPRAAEHVVAGLARWCADHGVARSADLV
                     GGLQW"
BASE COUNT          382 a          954 c         1005 g          329 t
ORIGIN      
        1 ggccggcgcc accacgacga ggtcgcaggt ctggccgagg cgggtgtggg ggatcggctc
       61 gggcccctcg aacagcgacg tgcgggccgg ctccgaggcc agtgccgaga aggtcagggg
      121 cccgacgaag cgggtggcgc cggcggtcag caccggcatc acgtgggcgc cggcgtcgac
      181 gaggcggcgg cagacctcga cggccttgta ggcggcgatg ccccctgaca cgccgagcac
      241 gacgcgccgc ccggcgagcg cggagcggtc gggggacacc cccgatcccc cgggggggcc
      301 tacttgatcg accgctcgac gacctcgggc cgctcgtaga cgatcttgcc gacctcgatc
      361 tcctccagcg agatcgacag cggcttgcgg gacagcgacg tcacctgggg cggcacgatc
      421 gtgcccaggc cctcgcccag ctggttgaag taggagttga tctggcgggc ccgcttggcc
      481 gccagcgaca ccagcgtgaa cttggagtcg acccggtcgg tgaggttctc cagcagcggg
      541 tgcatcaacg acgggcggcg ttccacagat cagtctcctg acgacgtgcg gcgggcctcc
      601 agggtagcag cgacctggtc cacggccgct tccaggtcgt cgttgacgac gacgaggtcg
      661 aactcggcgg ccatcgcctc ctcggcgtcg gctttggcca gccgccgttc gatggtgtcg
      721 agggcgtcgc cggcccgggc caggagccgc tcccgctgca cctcccggct cggtggccgg
      781 aggaatacca gcagggcgtc gggaaacgcc ttccggacgg ccatggctcc ctggacgtcg
      841 atctcgagga gcacgtcgtc accggcggcg agatggtcga ccatcggccg cttcggggtg
      901 ccgtagaagt ggccgaagac ctcgaacgac tcgacgaact cgtcgtgctc ctgccacttc
      961 tcgaaggtgg cccggtccag gaagacgtag tcccgcccgt cgacctcacc ggggcgcgcc
     1021 ggccgggtcg tggcggagac cgacagccac aacccgggtt cccgggcgag gaggcgggcg
     1081 gcgacggtgc ccttgccggc tccggaaggg cccgagagga cgaggaggac gcccagcggc
     1141 taccgctcga agtgctcgag cagcgcccgc cgctgatggg tgccgaggcc ccggacgcgg
     1201 cggttctcgc tgatctcgag ctcctccatc gtccgccggg ccttcacctt cccgacaccg
     1261 gggagcgatt ccagaacggt gaccaccttg agcttggcga cggcgtcgtc ggtgtcgccc
     1321 tgattcagta gctcgccgag gctgatcgaa ccagccttca gcttctcctt cagctcagcc
     1381 cgctggcgac gggcggcagc tgccttctcg agcgccgcct ggcgctgcgc gggatcgagc
     1441 gacggcggga ggggcatagc cttgggacct ccggaggcgt caacgaaact ttgttcggac
     1501 cccgtgcggt gcactgcacg gcggcgtcgc cgcccgggga ccgacgaacc tggtcagtat
     1561 aggcagagcc ctcggcccca caacccgtcc gcaaccggga tttcatggaa aatcggcccc
     1621 cagaaacggt ttccgcgtca cggacgtgac agacgagggt cgagcatggc cgagatcgcg
     1681 gccgcggcgg actccggatc ggaagcggcg gtcaccgccc ggccgaccac caggagatcg
     1741 gcgccggcgg cgatcgcctc ggccggagtg ccgacccggg cctggtcgtg gctggcgccg
     1801 ccggggaggc ggatgccggg cacgacggcc agaagcgacg aacgctcctt caccgccggg
     1861 agctcgcgga cggagcacac cacgccgccg caaccgccgg ccgcggcggc gtcgagccgg
     1921 gccgggaagg cggcggcgtc ggggtcgctg gtgaggacgg tgacgccgag cgccaccgga
     1981 gggtcccccg cgccggcgtc ggcggcgccg gcggccagac cggcgacgcc ggcccggagc
     2041 atgtcgacgc cgcccgaggc gtggagcgtc acgaatccgg cgccgagccg gccgatctgg
     2101 cggcccgcct tctccaccgt cgtggggatg tcgtggagtt tgaggtcgag gaagacgcgc
     2161 cggccggggg cggtgagggc ctcgacggcc gccggcccgg aaccggcgaa gagttccagg
     2221 ccgatcttga cgaccccgaa ccaggggtcg aggcggtcgg ccagtttgac ggcggccgag
     2281 agatcgtcga cgtcgagcgc cagggccagg cgctcccggg cggagggcgc ggcgtcgccg
     2341 gcgctcacca ttgcagccct cccacgagat cggcgctccg ggcgacgccg tggtcggcgc
     2401 accagcgggc cagcccggcc acgacgtgct ccgccgcccg ggggtcgaag aacgtcgccg
     2461 tccccacgcc gacggcgctg gccccggcca ggagcatctc gacggcgtcg agtccggtgc
     2521 ggacgccgcc ggtcccgatg atcggcgtgc ccggcagggc ccgggcgacg tcggccacgg
     2581 cccgcagcgc caccggcttg atggcgggcc ccgacagccc gcccccgccg gcgccgagcc
     2641 gcggccggcg ggtctcggcg tcgatcgcca
//
LOCUS       DATGJT010000184         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1372417, whole genome shotgun sequence.
ACCESSION   DATGJT010000184 DATGJT010000000
VERSION     DATGJT010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372417"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="VKX24_03190"
     CDS             <1..799
                     /locus_tag="VKX24_03190"
                     /inference="COORDINATES: protein motif:HMM:NF014804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLJ07513.1"
                     /translation="HAIECRINAEDPANGFRPTPGLITKFDRPDGFGVRVDAGYEAGL
                     AVSQYYDNLMAKLVTWGPDREAARRRMLRALAEFEIEGVRTTIPAQAALLAEPAFIEG
                     KHSTKWLEEEVDPALLTAAAAAAAPAPPALAGADAAGEPLVARTVPVEVDGRRFDVKV
                     WLPETPALPAGAAPAAGARARKPRSAAGGGSGAAGSGEVASPMQGTIVKTLVSVGDAV
                     EVGQPVVVLEAMKMENHVNAEKAGTVSEVRVSAGDTVGTGDVLVVIS"
     gene            complement(1007..>2164)
                     /locus_tag="VKX24_03195"
     CDS             complement(1007..>2164)
                     /locus_tag="VKX24_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ07514.1"
                     /translation="GLAAEGRLDLDALRARIAGIEQRLHHSICDLLSSQGVRMIQGTG
                     RLKGPHEVIAETAAGVEEIEADAILLATGSRPRIPDWAEVDGDRVLTTRQAYPPKEIP
                     EGLVVIGSGVTGVEFTHMFRSLGSEVTLIVSRQQVLPGKDPEVAAALEAEFLRRGVRL
                     YKGARASGIERDGAALRVLCDDGRVAKGTHAVLAIGSIPNSDGLGLDAAGVQCDAGGY
                     VSVTHHLQSNVPHIYVAGDLSGKLPLSSVAAMQGRKIAEHVMGLHTRSHRHLDYEKAA
                     SAIFTEPEIADVGVAEAEAFAEGRKLRVTKVPFSANAKALIEGDSRGFVKIISDPATG
                     VVLGGSIVGRNAAELISVIALAVTCNLKVNDLVDSVLVHPALSESLADAAE"
BASE COUNT          295 a          751 c          822 g          296 t
ORIGIN      
        1 ccacgccatc gagtgccgca tcaacgccga ggacccggcg aacgggttcc ggccgacgcc
       61 cggcctgatc acgaagttcg accggccgga cgggttcggc gtacgggtcg acgccggcta
      121 cgaggccggc ctggccgtgt cgcagtacta cgacaacctg atggccaagc tcgtcacctg
      181 ggggcccgac cgggaggcgg cccgccggcg gatgctgcgg gctctggcgg agttcgagat
      241 cgagggcgtg cggacgacca tcccggccca ggcggcgctg ctggccgagc cggccttcat
      301 cgaaggcaag cattccacca agtggctgga ggaggaggtc gacccggcgc tgctgacggc
      361 ggcggcggcg gccgccgcgc cggcgccgcc ggccctggcc ggtgccgacg ccgccggcga
      421 gccgctggtg gcccggacgg tcccggtgga ggtcgacggg cgccgcttcg acgtcaaggt
      481 ctggctgccc gaaaccccgg ccctgccggc cggcgcggcc ccggcagccg gcgccagggc
      541 ccgcaagccc cgctcggccg ccggcggcgg gagcggcgca gcgggcagcg gcgaggtggc
      601 ctcgccgatg cagggcacga tcgtgaagac gctggtgtcg gtgggcgacg ccgtcgaggt
      661 gggccagccc gtcgtggtgc tcgaggcgat gaagatggag aaccacgtca acgccgaaaa
      721 ggcggggacg gtctccgagg tccgggtctc ggcgggcgat acggtcggga ccggtgatgt
      781 gctggtggtg atcagctaac ccgtcttggc ccgtcggggg tcggggtcct gaccggcggc
      841 tccgcactgc tcagtcgccg gcggccagga ccccgacccc ctcctcgaac cagcgttcct
      901 gaccggcggc tccgcactgc tcagtcgccg gcggccagga ccccgacccc ctcctcgaat
      961 tggcgttcct gacggcgcca tgacagccgt gaggaacgcc ggttggctat tcggcggcgt
     1021 cggccaggga ttccgagagg gccgggtgga ccagcacgga gtcgacgagg tcgttcacct
     1081 ttaggttgca ggtgacggcg agggcgatga cggagatcag ctcggcggcg ttgcggccga
     1141 cgatcgagcc gccgaggacg acgccggtgg ccgggtcgga gatgatcttg acgaagccgc
     1201 gggagtcccc ttcgatcagc gccttggcgt tggcggagaa cgggaccttc gtgacccgga
     1261 gcttgcggcc ttcggcgaag gcctcggcct cggccacgcc gacgtcggcg atctccggtt
     1321 cggtgaagat ggccgaggcc gccttctcgt agtcgaggtg gcggtggctg cgggtgtgca
     1381 agcccatcac gtgctcggcg atcttgcggc cctgcatggc cgccaccgac gacagcggca
     1441 gcttccccga gaggtcgccg gccacgtaga tgtgggggac gttcgactgc aggtggtgag
     1501 tcaccgacac gtagccgccg gcgtcgcact gcacccctgc ggcgtcgagc ccgagcccgt
     1561 cgctgttggg gatggacccg atggccagca cggcgtgggt tcccttggcc acccggccgt
     1621 cgtcgcacag cacccgcagg gcggcgccgt cgcgctcgat gcccgatgcc cgggcgccct
     1681 tgtagagccg cacgccgcgg cggaggaact cggcctcgag cgccgccgcc acctccgggt
     1741 cctttcccgg gagcacctgc tggcgggaga cgatcagcgt cacctccgag cccagcgacc
     1801 ggaacatgtg ggtgaactcc acgccggtca cgccggagcc gatcacgacg agcccttcgg
     1861 ggatctcctt cggcgggtag gcctggcggg tcgtcagcac ccggtcgccg tcgacctcgg
     1921 cccaatcggg gatccggggc cgggagccgg tggccaggag gatggcgtcg gcctcgatct
     1981 cctccacgcc cgcagccgtc tcggcgatga cctcgtgggg gcccttcagg cggcccgtcc
     2041 cctggatcat gcggacgccc tgcgacgaca gaaggtcgca gatcgaatgg tgcagccgct
     2101 gctcgattcc ggcgatgcgg gcccgcaggg cgtcgaggtc gaggcggccc tcggcggcga
     2161 ggcc
//
LOCUS       DATGJT010000185         4096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_438552, whole genome shotgun sequence.
ACCESSION   DATGJT010000185 DATGJT010000000
VERSION     DATGJT010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438552"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            294..788
                     /gene="rimP"
                     /locus_tag="VKX24_03200"
     CDS             294..788
                     /gene="rimP"
                     /locus_tag="VKX24_03200"
                     /inference="COORDINATES: protein motif:HMM:NF036577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HLJ07515.1"
                     /translation="MTDTTELAGALSPVVEARGLELVDVEVHGAQLTVFVDRQGGVGL
                     DDLSEATKDVSAALDRIDPIPGRYTLTVSSPGLERRLRTPAHFARAVGETVTVRVDAG
                     TADVRRLTGTLESADETGCTLTGADVPGGEVRISYDQIERARTVFEWGPKPRRAKSER
                     VKRP"
     gene            785..2128
                     /gene="nusA"
                     /locus_tag="VKX24_03205"
     CDS             785..2128
                     /gene="nusA"
                     /locus_tag="VKX24_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HLJ07516.1"
                     /translation="MSKTNFEFLDALGQIARDKGISVDTLLDALANALVAAYKRRPDA
                     AEEAVVTIDPDSGEIRVYGQELNEDGEVIREWDDTPDDFGRIAAQTAKQVILQRIREV
                     ERDMKYEEYAGREGDIVTGIVQQTDNRYTLLDLGKVEALLPQAEQVPYERYEHGARLK
                     AYIVEVRRTSKGPQIVVSRTHPGLILRLFQLEVPEIVEGVVEIKAIAREPGHRTKIAV
                     AANDPNVDPVGACVGARGSRVRMVVNELRGEKVDIVPYSPDPAEFVMKALSPAKVKEV
                     RIVNETGTAEVVVPDYQLSVAIGKEGQNARLAARLTGWRVDIKSESQLFEEEQNPVEE
                     EWAAGEWITDESGQMVWQPAEGGEAVSASDAGYGAAEAGADEAGGAPAAAAGVAAAGS
                     QPPAEAEAETEEKPDENIAVEADAEAAAAGATADGTDAAAAGAPAADAAAGGADA"
     gene            2121..2453
                     /locus_tag="VKX24_03210"
     CDS             2121..2453
                     /locus_tag="VKX24_03210"
                     /inference="COORDINATES: protein motif:HMM:NF016204.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HLJ07517.1"
                     /translation="MPDSAPRRHVPERTCIGCRRKAGPSALVRVARRSDGALAVGRAE
                     PGRGAWLCAGSGSCFDAAVRRRAFGRALRCDVPAHELARLRGKLVGGGDSSPHGPVGR
                     PLEGVGGA"
     gene            2454..>4096
                     /locus_tag="VKX24_03215"
     CDS             2454..>4096
                     /locus_tag="VKX24_03215"
                     /inference="COORDINATES: protein motif:HMM:NF016635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 N-terminal
                     domain-containing protein"
                     /protein_id="HLJ07518.1"
                     /translation="MANKRIRVYELARELGLSNKEALDLCERLRIGVKSHSSSIEDPQ
                     ADRVRRLADAEGLRRPTQPEAEPEPAGAGAPSAGVAAAAGGVAAGTGGGDAGAAEAPP
                     AEPAVPVHRVIRSTEGGVRLAPRPEAPSPPPPPRPPMPERVQPIQPAPAGPGEAPSVE
                     RPAAEARPPAEASRPAAASAAPSPTAPPSTGPAPGPGAPPAGRPSGPGNGGGRAGGPV
                     GRPNGGGAGGAGGPVGDSAPGRRIPPPPPPRSISGKPIPPPPGAPRPAGPGGGGPGAR
                     GGFQGRGGPTGGSGGPRTGGGPPRPGGGGGFAPRGGPPRPGGGPGGGGGGYGRGGPGG
                     GGGGPGGGGFPGRGGPGGGGGPGGGFAGRGRPGPQQRPRRKKKRGRGEELTPFASPSY
                     TPADAPVPEGEIVVPRLTTIQDLAPKLNRTPADIVRMLMMAGEMVTATQSLPDEMIEL
                     IAEELGANVILVEPGMEAELELQKLLSFDDDDEDDESNLEPRAPVVTVMGHVDHGKTK
                     LLDRIREANVVAGEAGGITQHIGAYQSVQNGRKITFIDTP"
BASE COUNT          581 a         1465 c         1569 g          481 t
ORIGIN      
        1 atggcggccc tcggccccga cggcgaggac cgcctggccc agcacgcgct gaccatccgc
       61 tgcctccagc gttccgatgg ctcgctcgcg gcgcaaggag accccgaaga ccggctcgtt
      121 gcggtcgtcg gccgctccta ctgacgtcgg gattgctata attctctggc tgtccattaa
      181 gaatcagtac ctcgttgaag cgtgggctgc ggcccacgct ttcgctttgc gagggccagg
      241 ttttgacgat cggaccagga aggtcacgag tgcagacgaa ggaggtgaca gggatgaccg
      301 acacgacgga gctggccggc gccctgtcgc cggtcgtcga ggcacggggc ctggagctgg
      361 tcgacgtgga ggtccacggg gcccagctga cggtcttcgt cgaccgccag ggcggggtcg
      421 gcctggacga cctgagcgag gccacgaagg acgtctccgc cgcgctcgac cggatcgacc
      481 ccataccggg gcgctacacg ctcacggtgt cgagtcccgg gctcgagcgg cggctccgca
      541 ccccggccca tttcgcgcgg gcggtcggcg agacggtcac cgtgcgggtg gatgccggca
      601 ccgctgacgt ccggcgcctg accgggacac tcgagtcggc cgacgagacg ggctgcaccc
      661 tgaccggggc ggacgtgccg ggcggcgagg tacgcatcag ctacgaccag atcgaaaggg
      721 cgcgcacggt gttcgaatgg gggccgaagc cgcgtcgcgc aaagagtgag agggtgaagc
      781 ggccatgagc aagaccaact tcgaattcct cgacgcgctg ggccagatcg cacgcgacaa
      841 gggaatctcg gtcgacaccc tgctcgacgc cctggccaac gcgctggtcg ccgcctacaa
      901 acggcggccc gacgcggccg aggaggccgt cgtcaccatc gaccccgact cgggcgagat
      961 ccgcgtctac ggccaggagc tcaacgagga cggcgaggtg atccgggagt gggacgacac
     1021 ccccgacgac ttcgggcgca tcgcggcgca gacggccaag caggtgatcc tccagcggat
     1081 ccgcgaggtc gagcgcgaca tgaagtacga ggagtacgcc ggccgtgagg gcgacatcgt
     1141 cacggggatc gtccagcaga ctgacaaccg ttacacactc ctcgacctcg gcaaggtcga
     1201 agcgctgctg ccccaggcgg agcaggtgcc ctacgagcgc tacgagcacg gcgcccggct
     1261 caaggcctac atcgtcgagg tgcggcgcac ctcgaagggc ccgcagatcg tcgtgtcccg
     1321 cacccacccc ggcctgatcc tgcggctgtt ccagctcgag gtgccggaga tcgtcgaggg
     1381 cgtcgtcgag atcaaggcca tcgcccgcga gcccggccac cggacgaaga tcgccgtggc
     1441 ggccaacgac cccaacgtcg acccggtcgg cgcctgcgtc ggcgcccggg ggtcgcgggt
     1501 gcggatggtc gtcaacgagc tgcggggtga gaaggtcgac atcgtgccct actctcccga
     1561 cccggcggag ttcgtgatga aggcgctgtc gccggccaag gtcaaggaag tccgcatcgt
     1621 gaacgagacg ggcacggccg aggtcgtcgt gcccgactac cagctctcgg tggccatcgg
     1681 caaggagggc cagaacgccc gcctcgccgc ccggctcacc ggctggcggg tcgacatcaa
     1741 gagcgagtcg cagctcttcg aggaggagca gaaccccgtc gaggaggagt gggccgccgg
     1801 cgagtggatc accgacgagt cgggccagat ggtctggcag ccggccgagg gcggcgaagc
     1861 ggtctcggcg tccgacgccg ggtacggcgc tgcggaagcc ggcgctgacg aagcgggcgg
     1921 cgcgcccgcc gcggccgccg gagtggccgc cgccgggtcg cagcctccgg ccgaggcgga
     1981 ggccgagacc gaggagaagc ccgacgagaa catcgccgtg gaggcggatg cggaggcggc
     2041 ggcggccggc gcaacggctg acggcaccga tgccgccgcg gccggggctc cggcggcgga
     2101 cgccgccgcg gggggcgccg atgcctgact ccgccccccg tcgccacgta ccggagcgca
     2161 cctgcatcgg ttgccggcgc aaggccggcc cttcggcgct ggtgcgcgtc gcccggcgat
     2221 ccgacggcgc cctggccgtc ggaagggccg agccggggcg gggagcatgg ctgtgcgcgg
     2281 ggtcgggatc gtgcttcgac gccgccgtcc ggcgccgggc attcggccgg gcgctgcgct
     2341 gcgacgtccc ggcgcatgag ttggcgcggc tgcgtgggaa actggtgggc gggggcgaca
     2401 gctccccgca cggcccggtg ggccgaccgt tggaaggggt tggcggagcg tagatggcga
     2461 acaagaggat ccgggtctac gagctggcgc gagagctcgg gctgtccaac aaggaagccc
     2521 ttgatctctg cgaacgtctg cggatcggcg tgaagagcca ctcctcgagc atcgaggacc
     2581 cgcaggccga ccgcgtgcgc cgcctcgccg acgccgaggg tctccgacgc cccacccagc
     2641 ccgaggccga gcccgagccg gccggcgccg gagcgccgtc cgccggtgtg gccgcggctg
     2701 ccggcggtgt ggccgcgggt accggcggcg gtgacgccgg ggcggccgag gcgccgccgg
     2761 ccgagcccgc cgtgcccgtc caccgcgtga tccgttcgac cgagggcggg gtccggctgg
     2821 cgccccggcc ggaggcgccg tcgccgcctc cgccgccgcg gccgccgatg cccgagcggg
     2881 tgcaaccgat tcaaccggcg ccggccggtc ccggcgaggc tccgtccgtg gagcgtccgg
     2941 ccgccgaggc ccgtcctccg gccgaggcgt cgcgccctgc ggccgcctct gccgcgccgt
     3001 ctccgaccgc gccaccgtcc accgggcccg cgcccggccc gggcgcgccg ccggccgggc
     3061 ggccgtcagg tcctgggaac ggcggtggcc gcgctggcgg cccggtgggt cgccccaacg
     3121 gcggtggcgc cggtggcgcc ggtggtccgg tcggcgacag cgcgccgggc cggcggatcc
     3181 caccgccccc gccgcctcgc agcatttccg gcaagcccat tccgcccccg cccggtgcgc
     3241 cccgaccggc cggcccgggg ggcggcggtc ccggcgcccg gggaggattc cagggtcgcg
     3301 gcggtcccac cggtggaagc ggtgggcccc gcaccggcgg cggcccgccc cgtcccggcg
     3361 gtgggggcgg ctttgcgccg aggggtggcc cgccgcgtcc cggcggcggt cccggcggtg
     3421 gtggcggcgg ctacggccgt ggtggccccg gcggcggtgg cggcggtccc ggcgggggag
     3481 ggttccccgg tcgcggcggt cccggcggcg gcggcggtcc cggcggcggt ttcgccggtc
     3541 gcggccggcc cggcccgcag cagcggcccc ggcgcaagaa gaagcgcggg cgcggcgagg
     3601 agctgacgcc gttcgcgtcg cccagctaca cgccggccga cgcacccgtc cccgagggcg
     3661 agatcgtcgt cccccggctc acgaccatcc aggacctcgc acccaagctc aaccggaccc
     3721 cggccgacat cgtccgcatg ctgatgatgg ccggcgagat ggtgacggcc acacagtcgc
     3781 tgcccgacga gatgatcgag ctgatcgccg aggagctcgg cgccaacgtg atcctcgtcg
     3841 agccgggcat ggaggcggag ctcgagctcc agaagctgct ctcgttcgac gacgatgacg
     3901 aggacgacga gtcgaacctc gagccgcggg cgccggtcgt gaccgtgatg ggccacgtcg
     3961 accacggcaa gacgaagctg ctcgaccgga tccgggaggc caacgtggtc gccggcgagg
     4021 ccggcggcat cacacagcac atcggtgcct accagtcggt tcagaacggc cggaagatca
     4081 cgttcatcga cacgcc
//
LOCUS       DATGJT010000186         2773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1163649, whole genome shotgun sequence.
ACCESSION   DATGJT010000186 DATGJT010000000
VERSION     DATGJT010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163649"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..898)
                     /gene="istB"
                     /locus_tag="VKX24_03220"
     CDS             complement(110..898)
                     /gene="istB"
                     /locus_tag="VKX24_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007171755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HLJ07519.1"
                     /translation="MSAPPPVLAPDLTAGLRRLKLAAMRRLAPDLLVTAKTQRWTPEE
                     LLRTLIEAEITAREESNARTRLKAAAFPVTKTLDEFDIAISSVPKATFDYLASLEWLR
                     AKENACLIGPAGTGKSHLLVALGHAAVDAGFRVRYVSAADLVETLYRGLADNSVGRVI
                     DNLLRNDLVIVDELGFAPLDDTAAQLLFRFVATAYERRSLGISSHWPFEDWGRFLPEH
                     TTAVSLLDRLLHHCNVVVTDGESFRMREARAANGRRKPKKTDDD"
     gene            complement(895..2348)
                     /gene="istA"
                     /locus_tag="VKX24_03225"
                     /pseudo
     CDS             complement(895..2348)
                     /gene="istA"
                     /locus_tag="VKX24_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007240673.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
BASE COUNT          428 a          984 c          962 g          399 t
ORIGIN      
        1 gacggacggg atctcgctga tcgggcgggg ggcctgttga gtgtcaacgg ccaggtagcg
       61 gtccccggtg gtggccagga gaagtcccca cctcctcggg gttcgtcagt tagtcgtcgt
      121 cggtcttctt gggtttcctc cttccgttgg ccgcccgggc ttctcgcatc cgaaacgact
      181 ccccgtcagt gacaacgacg ttgcagtggt ggagaagccg gtcgagcagg ctgacggccg
      241 tggtgtgctc gggaaggaat cggccccagt cttcgaaggg ccagtgggag ctgatcccga
      301 gggaccgtcg ttcgtaggcg gtggcgacaa accggaacag gagttgggcg gcggtgtcgt
      361 cgagcggggc gaagccgagc tcgtcgacga tcacgaggtc gttgcggagc aggttgtcga
      421 tgacccggcc gacggagttg tcggccaggc cacggtagag ggtctcgacg agatcggcgg
      481 cggagacgta gcggacccgg aatccggcgt cgacggcggc gtggccgagc gcgaccagga
      541 ggtggctttt gccggtgccg gctgggccga tcaggcaggc gttctccttg gctcgcaacc
      601 attccagcga ggcgaggtag tcgaacgtcg ctttggggac cgacgagatg gcgatgtcga
      661 actcatcgag ggtcttggtc accgggaagg cggcggcctt gagccgggtc cgggcgttgg
      721 actcttcccg ggcggtgatc tcggcctcga tcagggtgcg gagcagttcc tcgggtgtcc
      781 agcgctgcgt cttggccgtg accagcaggt cgggggcgag gcggcgcatg gccgccagct
      841 tgaggcggcg cagcccggcg gtgaggtccg gcgccagcac cggcggcggg gcgctcaccc
      901 gagttccccg gcccggtagt cgtccagcga ccgggtcggc accgccggga acgggtagac
      961 cagcgcgtcg ccggctcggg tgggctgggg cgctcccggc ccagcggcca gaatggaacg
     1021 gacgtcggcg gcccgccacc ggtggaacgt gaccgcccgt tccagggcgg ccagcagcac
     1081 gtcccggcca tgggccgact cgagggcgac gatctcggcc aactcgccgg agagtttcgt
     1141 catcccggct gccgcggccc ccttgatgaa cgcctcggca accggcccca gcgcgcagaa
     1201 ggccttctcg gcgggggtct ggggtcggac cggccgccga gcagcccggg gtccgccgta
     1261 gtggtcatcg acgacggatg cctcaccggg ggtgacgagg ggatggtcag cgacgatctc
     1321 gtcaccatcg aggatcttca cccggccatc accggccagg aggcggacgt ggcgaccgat
     1381 caggcggttc gggaccgagt agcgcccgga cgcgaaccgg acacaggaca gcttgtcgac
     1441 cttgcggacc acgaccgggc cgatctgggg ccgcagtccc ggcagcggcc gcaacagggg
     1501 tcgttccacc tcgagacgct cggccgggac ggcaacgatc tcgctgtgga ccaccccgtt
     1561 cacctcatca caccacaccg ctgccgcccg gttggccgac accaggtccg cggccacaag
     1621 cccttgtggg acaacgagat ccagcttggc gtaaccgacg agtcgctcaa ccatcccctt
     1681 cgattccggg tcggccgcct cacagaaatc ggggcggaac ccgtagtggg tggcgaagcg
     1741 gacataggcc ggcgccggca cgaccacccc ggccacgacc ccgcccttga ggcagcccat
     1801 ccggtccgac agcatgacct tcggcacccc gcccagccgc tcgaggcact cggccagcaa
     1861 ccgcaacgtg gtggcctgac cctcctcggc ggcgaagcgg acgaaccgga accgactcca
     1921 ggcagacacg gcgcagaaca cgtgcagtcc gccctcggtg cccagtcgat gatcagggtc
     1981 tcgcccggtg tccacaccgc cggccgacga ccgtgctgct ggcggcgcca ttcccgcttg
     2041 cactcgctca ccagccgccg gaagttccgg gccgacccct catagcccgc cgcccgagct
     2101 tccggcagca gccacttggc cgtgatccgg ccccgggtcg acgccacccg cttcaccacg
     2161 acgtcccgga cgtcctcgta gttgcgccgc ctcgccggcg gctccggccg gccgcccccg
     2221 gccgcctgcc gcgccatcac ccgccggacc gtcttatgac acgtcccgca catctccgcg
     2281 gcaccccgga aggtgccgac ctcgccatac gcagcaacaa tgtccatctc ttccctctcg
     2341 ctcagcacaa gctcccctgg gtggtggcgg tcgatggttc gcaccgacac cgtcaccgcc
     2401 cagggggcag cagtggtgga cccagaacga ggggtgagga cttctacctg gccaccagcg
     2461 gggacctcaa ctggccacca ccggggactt caactggcca ccagcgggga ctttgccacg
     2521 gccacggaca gaagggtcca gcggctcgag cggctcgtcg ccctctgtcc cgcctgccac
     2581 gggtcaagca cgccgggctg gcctcgaagc ggggccgcct ctccgccgtc atcgcccacc
     2641 tcgccaaggt caacggctgg agcgcggacg acgccgcgct gtaccgggag gccgtgctcg
     2701 agacgtgggc gtcccgcagc cgccaccagt ggacgctcga catttcgctt ctcgccaccc
     2761 gctacggtgt cac
//
LOCUS       DATGJT010000187         3132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_438663, whole genome shotgun sequence.
ACCESSION   DATGJT010000187 DATGJT010000000
VERSION     DATGJT010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3132
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438663"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VKX24_03230"
     CDS             <1..352
                     /locus_tag="VKX24_03230"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07520.1"
                     /translation="FTTWLYRVATNAALDELRRRKRRPDPVELLDERVAAESGVESAV
                     TARLDVDAALASLGPEFRTAVVLRDLCDLDYAEIADVLDVPIGTVRSRIARGRAAIAD
                     RLREPAAPPERPTG"
     gene            349..1296
                     /locus_tag="VKX24_03235"
     CDS             349..1296
                     /locus_tag="VKX24_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07521.1"
                     /translation="MTMDTNPDHSEHLDDETLSALLDGDAAGASADAHLAACERCSAR
                     RGELAAARSALAAAPVEPLDELARRRLVAAALRAAGTAGADGAGADGAGADGTAPAGR
                     SRWAPRHRAVIGSAAAVLLLVLVGVPFVVGRHGSAKQADTSLSAEAPLAAPAGPAAGP
                     FLGDLGDLTDHDRLRLSLSGVSADSASGTGAVAGAARSAAPVGAPPAAPAPAAAGAAG
                     STAGGTAKSVPAAPGTPPSNSSEAFASNPATDRDRADAGACVAALLDGPARGGRLTGS
                     GVGNWRGRPAVVAAFELSGGTVAFVADRSGCDVLDRFAL"
     gene            complement(1293..1772)
                     /locus_tag="VKX24_03240"
     CDS             complement(1293..1772)
                     /locus_tag="VKX24_03240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07522.1"
                     /translation="MARWLDPQSHVVPVFRLVASLVVGLMLAGIGGLILGEYTFQGPG
                     VQWLAISGGAGLGGAMAWLLNRVWSHDPPLWMMPVAAALALAGETLAVQRDMDGASWP
                     PEAWAALVLAVAAGAYGVYSAHRVAEQLRAKEAEKAEMAEKAGEAENAEQPPASGAG"
     gene            1841..2122
                     /locus_tag="VKX24_03245"
     CDS             1841..2122
                     /locus_tag="VKX24_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07523.1"
                     /translation="MPDWTDQVADQIEHAVCTVRDKTVVPAERLVGYIVAGLFILLLL
                     MALGILAAVGLFRLVDVYVPSGSWATWLIFGGVFLLAGVLCLSFRRQPS"
     gene            2136..3068
                     /gene="trxB"
                     /locus_tag="VKX24_03250"
     CDS             2136..3068
                     /gene="trxB"
                     /locus_tag="VKX24_03250"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013875631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HLJ07524.1"
                     /translation="MDPVRDVIIVGSGPAGLTAAVYTARANLNPLVIEGFPGAGGQLM
                     LTTDVENYPGFPDGIMGPELMEKFRAQAARFGAEYLTANADRVDLSSPPFGVWAEGRE
                     FRARTVIISTGATARMLGLPSEARLLGHGLSTCATCDGFFFRGQEIAVVGGGDSAIEE
                     ATFLTRFATKVSVIHRRDELRASKIMQERAFANPSISFVWNSVVEDVVGAEKVEGLAL
                     RDVVTGETSELKVGGVFVAIGHDPNTSLFTGQVDLDPAGYVLTHDGSKTSVPGVFACG
                     DVQDHVYRQAITAAGSGCMAAIDAERYLEAQGHQ"
BASE COUNT          386 a         1203 c         1118 g          425 t
ORIGIN      
        1 gttcaccacc tggctctacc gggtggcgac caacgccgcc ctcgacgagc tccggcgtcg
       61 gaagcgccgt cccgaccccg tggagctgct cgacgaacgg gtggcggcag agtccggcgt
      121 ggaatcggcg gtgaccgccc gactcgacgt cgacgccgcc ctggcgtcgc tcggcccgga
      181 gttccggacc gcggtcgtcc tccgcgacct ctgcgacctc gactacgccg agatcgccga
      241 cgttctcgac gtaccgatcg gcacggttcg ctcccgtatc gcccggggcc gggcggcgat
      301 cgccgaccgg ctgcgggaac cggccgcccc tcccgaacgc ccaaccggat gacgatggac
      361 acgaatcccg accactccga gcacctcgac gacgagacgc tctcggcgct gctcgacggc
      421 gacgccgccg gcgcctcggc ggacgcccac ctggcagcct gcgagcgctg ctcggcccgc
      481 cggggggagc tggccgccgc ccggtcggcg ctggccgcgg cgccggtcga gccgctcgac
      541 gagctggccc ggcgccggct ggtggcggcg gcgctgcggg ccgccggcac tgcgggggcg
      601 gacggagcgg gggcggacgg agcgggggcg gacgggacgg caccggccgg ccggtcccgg
      661 tgggcaccgc gccaccgggc ggtcatcggc tcggcggccg ccgtgctgct cctcgtcctg
      721 gtcggcgtcc cgttcgtggt cggccgccac gggagcgcca aacaggccga cacgtcgttg
      781 tcggcggagg cgccgctggc cgccccggcc ggccctgccg ccggtccctt cctcggcgac
      841 ctgggcgacc tcaccgatca cgaccggctc cggctcagtt tgagcggcgt ctcggccgac
      901 tcggcctccg gcaccggagc ggtggcgggc gccgcccgtt cggcggcacc ggtgggggcg
      961 cctccagccg ctccagcccc ggcggccgcc ggcgccgccg ggagcaccgc cggcggcacg
     1021 gcgaaatcgg tgcccgccgc ccccggcacg ccgccgtcga actcctcgga ggcgttcgcc
     1081 tccaaccccg caaccgaccg ggaccgggcc gacgccggcg cctgcgtcgc cgccctgctc
     1141 gacgggccgg cccggggcgg gcgcctgacc ggctcgggcg tcggtaactg gcggggccgg
     1201 ccggcggtgg tggccgcctt cgagctctcg ggcgggacag tggccttcgt ggccgaccgg
     1261 tccggctgcg acgtcctcga ccggttcgcc ctctaaccgg cgcccgacgc cggcggctgc
     1321 tcggcgttct ccgcctcccc ggccttctcc gccatctccg ccttctccgc ctccttggcc
     1381 cgcagctgct ctgccacccg atgggccgag tacacgccgt aggcgccggc ggcgacggcc
     1441 agaacgaggg cggcccaggc ctcgggcggc caggaggcgc cgtccatgtc ccgctggacc
     1501 gccagcgtct caccggccag cgccagcgcc gcggccaccg gcatcatcca cagcggcgga
     1561 tcgtggctcc agacccggtt gagcagccag gccatcgccc cgccgaggcc cgccccgccg
     1621 gagatcgcca gccactggac gcccgggccc tggaacgtgt actcgccgag gatcagccct
     1681 ccgatgccgg ccagcatcag gccgaccacc agcgaggcca ccagccggaa gacggggacg
     1741 acgtggctct gggggtccag ccaccgggcc atgggcggca gcgtatcggc accgggcagt
     1801 ggaaaaggtg gcggcagtgg cttgtgtagg ctcatccccg atgccggact ggaccgatca
     1861 ggttgccgac cagatcgagc acgccgtctg cacggtgcgg gacaagacgg tggtcccggc
     1921 cgagcggctc gtcggctaca tcgtcgccgg gctgttcatc ctcctgctgc tcatggccct
     1981 cgggatcctg gccgccgtcg gcctcttccg gctcgtcgac gtgtacgtcc ccagtggatc
     2041 gtgggcgacg tggctgatct tcggcggagt attcctgctg gccggcgtgt tgtgcctgtc
     2101 gttccgccgc cagccgtcct aggagacaca ccgccatgga tcccgtccgg gacgtcatca
     2161 tcgtcgggtc cggcccggcc ggcctgaccg ccgccgtcta caccgcccgg gccaacctca
     2221 acccgctcgt gatcgagggc ttccccggcg ccggcgggca gctgatgctg accaccgacg
     2281 tcgagaacta ccccggcttc cccgacggca tcatggggcc ggagctgatg gagaagttcc
     2341 gggcccaggc ggcccgcttc ggcgccgagt acctcaccgc caacgccgac cgggtcgacc
     2401 tctcgtcgcc cccgttcggc gtctgggccg agggccggga gttccgggcg aggacggtga
     2461 tcatctccac cggggccacg gcccggatgc tcggcctccc gtcggaggcc cgcctcctcg
     2521 gccacggcct gtcgacgtgc gccacctgcg acggcttctt cttccggggc caggagatcg
     2581 ccgtggtcgg cggcggcgac tcggccatcg aggaggccac gttcctcacc cgcttcgcca
     2641 ccaaggtctc ggtgatccac cggcgcgacg aactgcgggc ttcgaagatc atgcaggagc
     2701 gggccttcgc caatccctcg atcagcttcg tgtggaacag cgtcgtggag gacgtcgtcg
     2761 gcgccgagaa ggtcgagggg ctcgccctgc gcgacgtcgt gaccggggag acgtcggagc
     2821 tcaaggtcgg cggcgtgttc gtggccatcg gccacgatcc caacacgtcg ctgttcaccg
     2881 ggcaggtcga cctcgacccg gccggctacg tcctgaccca cgacgggtcg aagacgtcgg
     2941 tccccggcgt cttcgcctgc ggcgacgtcc aggaccacgt ctaccggcag gcgatcaccg
     3001 ccgccggttc gggctgcatg gcggccatcg acgccgagcg gtatctggag gcccagggcc
     3061 atcagtaggc ccgggccgtc ggtagactgg ggaatctgcg ccgttcaggc ggtgttccac
     3121 aagtggacca ca
//
LOCUS       DATGJT010000188         2561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_854614, whole genome shotgun sequence.
ACCESSION   DATGJT010000188 DATGJT010000000
VERSION     DATGJT010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854614"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1988
                     /locus_tag="VKX24_03255"
     CDS             <1..1988
                     /locus_tag="VKX24_03255"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HLJ07525.1"
                     /translation="VPKARALLEAAARAGLDCRRPNLAVSFAAPGRAPEVGAPIPEAP
                     YGNVHGRPRSTCRLCGECDTGCNAGAKNTLDHTYLSAAAHCGAELRTRCEVRTIAPRP
                     EGGFTVGYVVHLDENEGRPVKTDRLPVVTITADRLVLGAGSLGTSYLLLRNKANFPHL
                     GAALGTRFSGNGDLIGFVMEATDGSGRRREDRDLFASRGPVITSAVRVADAVDGAPSG
                     GRGYYVEDAGYPAFVDWLAEATSVPNTAKRFLRFGWERLRTKVARDPRSRMGVELAAL
                     IGSGRISGCSMPLLAMGRDIPDGRLGLWGNWLDVSWNMTSSEEYFGAVTATMAELAEA
                     LGGRFHPNPMGRFKRCITAHPVGGVPMGRHIGEGVVDAWGESFTYPGLYVVDGAAMPG
                     PVGANPSLTIAAFAERAAQRAIEQRRRPAARRVTVDVRESEPAAALDLTAAAGPPPAP
                     QAQAQAPDPQAGRLAFTEEMHGHVTLGEADPATGAAHHGRTGCAFHLTIEIADIDRFL
                     DDPDLAATAAGWVECEALGGVLPVLGGTFNLFVEQGDGSDRMRYRLKFKDGNGVPLTL
                     SGFKVVRDDPGFDVWSDTTTLYVRILAGHVEPADEAAAEVVGAGVLRIGPAGLVRLLR
                     SMETGGPHPLRTRARFMERFASTLWDLYAPAVEHQEV"
     gene            1993..>2561
                     /locus_tag="VKX24_03260"
     CDS             1993..>2561
                     /locus_tag="VKX24_03260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HLJ07526.1"
                     /translation="MAVTAERRETLVPLTAGDGHPLQVIHIEGEREPWRGPVLLVHGA
                     GVRANMFRPPVERSVVDVLLEAGFDVWLESWRASVDFPWNRWTLDQGAVLDHPVAVQA
                     VLERTGAGELGAVIHCQGSCSFALALVAGLVPQVTRVVANSVTLHPVVPTHAAVKLRA
                     SAAALSHMARYVDPTWGIRPDGPLSRALV"
BASE COUNT          327 a          971 c          920 g          343 t
ORIGIN      
        1 acgtgcccaa ggcccgggcc ctcctggagg cggccgcccg ggccgggctc gactgccggc
       61 gccccaacct cgccgtgtcg ttcgccgccc cgggacgggc cccggaggtc ggcgcgccga
      121 tcccggaggc gccgtacggc aatgtccacg gccgtccccg ttccacctgc cggctgtgcg
      181 gcgagtgcga caccggctgc aacgccggag ccaagaacac gctcgaccac acctacctgt
      241 cggccgccgc ccactgcggc gccgagctgc ggacccgctg tgaggtccgc acgatcgccc
      301 cccgtccgga gggtgggttc accgtcggct acgtcgtcca cctcgacgag aacgagggcc
      361 ggccggtgaa gaccgaccgt ctgcccgtcg tcacgatcac cgccgaccgc ctcgtgctcg
      421 gcgccgggtc gctcgggacg agctacctgc tcctgcggaa caaggccaac ttcccccatc
      481 tcggggcggc gctcggcacc cggttctccg ggaacggcga cctgatcggc ttcgtgatgg
      541 aggccaccga cgggtctggc cggcgccggg aggaccgcga cctcttcgcc tcccggggcc
      601 cggtcatcac ctcggcggtc cgggtggcgg acgccgtcga cggagcgcct tccggcgggc
      661 ggggctacta cgtcgaggac gccggctatc ccgctttcgt cgactggctg gccgaggcga
      721 cgagcgtgcc caacaccgcc aagcggttcc tgcgcttcgg atgggaacgg ctgcggacca
      781 aggtcgccag ggacccgagg agccggatgg gtgtcgagct ggccgcgctg atcggctccg
      841 gccggatctc gggctgttcc atgccgctgc tggccatggg ccgcgacatt cccgacggcc
      901 gcctcgggct gtggggcaac tggctcgacg tcagctggaa catgacgtcg tcggaggagt
      961 acttcggcgc cgtcacggcc accatggccg agctcgccga ggcgctcgga ggccggttcc
     1021 accccaaccc gatgggccgc ttcaagcggt gcatcaccgc ccaccccgtc ggcggggtgc
     1081 ccatgggccg ccacatcggc gaaggcgtgg tggacgcctg gggcgagtcg ttcacctatc
     1141 ccggcctcta cgtcgtcgac ggcgcggcca tgcccggccc ggtcggggcc aacccgtcgc
     1201 tgaccatcgc cgccttcgcc gaacgggcgg cgcagcgggc catcgagcaa cggcgccgtc
     1261 ccgccgcccg gcgggtcacc gtcgacgtgc gggagagcga accggccgcg gcgctcgacc
     1321 tgaccgcggc ggccggaccg ccgccggccc cccaggccca ggcccaggcc ccggacccgc
     1381 aggcgggccg gctggcgttc accgaagaga tgcacggcca cgtgaccctg ggcgaagccg
     1441 atccggccac cggagcggcg caccatggcc ggaccggctg cgccttccac ctgacgatcg
     1501 agatcgccga catcgaccgg ttcctcgacg accccgacct cgccgccacc gccgccggct
     1561 gggtcgagtg cgaggcgctc gggggcgtgc tccccgtcct cggcggcacc ttcaacctct
     1621 tcgtcgagca gggcgacggc tccgaccgga tgcgctaccg gctgaaattc aaagacggca
     1681 acggcgtacc gctgacgctg tcggggttca aggtcgtccg cgacgacccc ggcttcgacg
     1741 tgtggagcga caccaccacg ctctacgtgc gcatcctcgc cgggcacgtc gagccggccg
     1801 acgaggcggc ggcggaggtc gtcggcgccg gcgtcctgcg gatcggcccc gcgggcctcg
     1861 tccgcctgct ccggtcgatg gagaccggtg gacctcatcc gctgcggacg agggcccgct
     1921 tcatggagcg gttcgcctcc accctgtggg acctctacgc ccccgccgtc gagcaccagg
     1981 aggtctgagg ccatggccgt gaccgccgaa cggcgcgaga cgctcgtccc cctcacggcc
     2041 ggggacgggc accccctgca ggtcatccac atcgagggcg aacgggaacc gtggcggggc
     2101 ccggtgctcc tggtccacgg agccggcgtg cgggccaaca tgttccgccc gccggtggag
     2161 cggtcggtgg tggacgttct gctcgaggcg ggattcgacg tgtggctgga gagctggcgg
     2221 gccagcgtcg acttcccctg gaaccggtgg acgctcgacc agggggcggt gctcgaccac
     2281 ccggtggcgg tgcaggcggt gctcgagcgg acgggggccg gcgagctcgg cgccgtcatc
     2341 cactgccagg ggtcgtgcag cttcgccctg gccctcgtgg ccggcctcgt cccgcaggtc
     2401 acccgggtgg tggcgaactc cgtcacgctc cacccggtgg tgccgaccca cgccgcggtc
     2461 aagctgcggg cgtcggccgc cgccctgtcg cacatggccc gctacgtcga tccgacgtgg
     2521 ggcatccggc cggacgggcc gctgtcccgg gccctggtct a
//
LOCUS       DATGJT010000189         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_750496, whole genome shotgun sequence.
ACCESSION   DATGJT010000189 DATGJT010000000
VERSION     DATGJT010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_750496"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..562
                     /locus_tag="VKX24_03265"
     CDS             2..562
                     /locus_tag="VKX24_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013156042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HLJ07527.1"
                     /translation="MGLEEKLPSGVLLTSVEKAAGWARARSVWPATFGLACCAIELFQ
                     TGGPKHDLARFGMEKTGATPRQADLMIVAGRLSQKMAPVTRQIYDQMPDPKWVISMGV
                     CASSGGMFNNYAIVQGVDHIIPVDIYLPGCPPRPEMLLDAILKLHDKIMNMKLGKNRD
                     RQITELEEARLNLRPVHLVAPEGSEL"
     gene            667..1326
                     /locus_tag="VKX24_03270"
     CDS             667..1326
                     /locus_tag="VKX24_03270"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017601063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HLJ07528.1"
                     /translation="MPARLGEERLNEPVVRMGMFGVQDTPDTSGYGLLRVHQAPSLDS
                     PRPYGSYFDEVADTLGFADAIERVVVDRGELTFHVRRERLPEVAAKLRDDPGLRFELC
                     SGVSGVHYPEEGGRELHAVYHLLSITHNRRLRLEVSVPDADPHVPSLTGVYPTCNWHE
                     RETWDFFGLIFDGHPALTRIQMPDDWKGHPQRKDYPLGGIPVEYRGAKIPPPEERRHY
                     Q"
     gene            1335..>2129
                     /locus_tag="VKX24_03275"
     CDS             1335..>2129
                     /locus_tag="VKX24_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014054065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase subunit D"
                     /protein_id="HLJ07529.1"
                     /translation="MPHAETGASDAEAAEGRVYTVSGEDWDEIIAAANEARDFESGER
                     IVVNMGPQHPSTHGVLRLILELEGETVTEARCGIGFLHTGIEKSIEFRNWTQGTTFVT
                     RMDYLTPFFQEVAYCLAVEKLLGVEEQIPERASVIRVLLMELNRISSHLVCIATGGME
                     MGALSAMIFGFRERELVLDIFEMITGLRMNHAYIRPGGLAQDLPPGAVDKIREFLALM
                     PKRMKDIEALSNENAIFKGRTEGVGYLDLTGCMALGITGPILRSTGL"
BASE COUNT          364 a          716 c          748 g          301 t
ORIGIN      
        1 catgggtctt gaagaaaagc tgccgagcgg cgtgctgctg acctcggtgg agaaggcggc
       61 cggctgggcc cgggcccggt cggtatggcc ggccacgttc ggcctggcct gctgcgccat
      121 cgagctgttc cagaccggcg ggcccaagca cgatctggcc cggttcggca tggagaaaac
      181 cggggcgacg ccgcgccagg ccgacctgat gatcgtggcc ggccggctca gccagaagat
      241 ggccccggtg accaggcaga tctacgacca gatgcccgac cccaagtggg tcatctcgat
      301 gggcgtgtgc gcctccagcg gcggcatgtt caacaactac gccatcgtgc agggcgtgga
      361 ccacatcatc ccggtcgaca tctacctgcc cggctgcccg ccgcgcccgg agatgctgct
      421 cgacgcgatc ctcaagctgc acgacaagat catgaacatg aagctcggca agaaccggga
      481 ccggcagatc accgagctcg aggaggcccg gctgaacctg cggccggtac acctggtcgc
      541 gcccgagggg tccgagctgt gagcgagtcc ggggagggct cgaaggccgg cccggaggaa
      601 acttggggct ccgaggcacc gcagggcccc gggccccagg ccgatcccgc agaggcagac
      661 agcaacctgc cggcccggct cggcgaggag cggctgaacg agccggtcgt ccgcatgggc
      721 atgttcggcg tgcaggacac cccggacacc tccggctacg ggctgctccg ggtgcaccag
      781 gcgccgtccc tagacagtcc tcgtccctac ggctcctact tcgacgaggt cgccgacacg
      841 ctcggcttcg cggacgccat cgagcgggtg gtggtcgacc ggggcgagct gaccttccac
      901 gtccggcggg agcggctgcc cgaggtggcg gcgaaactgc gcgacgaccc ggggctccgc
      961 ttcgagctgt gcagcggggt gtccggcgtg cactacccgg aggagggcgg ccgcgaactg
     1021 cacgccgtgt accatctgct gtccatcacc cataaccgga ggctgcggct ggaagtgagc
     1081 gtgccggacg ccgacccgca cgttccgtcg ctgaccgggg tgtacccgac gtgcaactgg
     1141 cacgaacggg agacgtggga cttcttcggc ctcatcttcg acgggcatcc cgcgctgacc
     1201 aggatccaga tgcctgacga ctggaagggc cacccgcagc gcaaggatta cccgctgggc
     1261 gggatcccgg tcgagtaccg cggcgccaag attccccctc ccgaggagcg gaggcactac
     1321 caatgaccag cggcatgccg cacgcggaga ccggggcgag cgacgccgag gccgccgagg
     1381 gccgggtcta caccgtctcc ggcgaggact gggacgagat catcgcggcc gcgaacgagg
     1441 ccagggactt cgagagcggc gagcggatcg tggtcaacat gggcccgcag cacccctcca
     1501 cccacggcgt gctgcggctg atcctcgagc tggagggcga gaccgtcacc gaggcccggt
     1561 gcggcatcgg cttcctgcac accgggatcg agaagagcat cgagttccgc aactggacgc
     1621 agggcacgac gttcgtcacg cggatggact acctgacccc cttcttccag gaggtcgcgt
     1681 actgcctcgc ggtggagaag ctgctgggcg tcgaggagca gatcccggag cgggccagcg
     1741 tcatccgggt gctgctgatg gagctcaacc ggatctcctc gcacctggtg tgcatcgcca
     1801 ccggcggcat ggagatgggc gccctctcgg cgatgatctt cggcttccgg gagcgggagc
     1861 tggtgctcga catcttcgag atgatcaccg gcctgcggat gaaccacgcc tacatccgcc
     1921 ccggcggtct cgcccaggac ctgccgcccg gcgcggtcga caagatccgc gagttcctgg
     1981 ccctgatgcc caagcggatg aaggacatcg aggcgctcag caacgagaac gcgatcttca
     2041 aggggcggac cgagggggtg ggttacctcg atctgaccgg atgcatggcg ctgggaatca
     2101 cgggcccgat cctgcggtcc accggtctt
//
LOCUS       DATGJT010000190         2660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_647766, whole genome shotgun sequence.
ACCESSION   DATGJT010000190 DATGJT010000000
VERSION     DATGJT010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647766"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VKX24_03280"
     CDS             complement(<1..774)
                     /locus_tag="VKX24_03280"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07530.1"
                     /translation="MSQGLDPDISALIEETLPLVRHVMYQATVHFPRHVDKEELVRAG
                     VLGLVEAAHRYDPAKGVPFAPYAARRIRGAVLDTVRKGDWAPRSLRRAGRAVEATAER
                     LAGELRRSPTSLELAAALGMTGEELAELQHRLLQTVVLGLDMVVSETWGEGDTDVFLE
                     GTVADDSVSVDDDLCDREMAGYLRDAVALLPDRHRTVIQGYFFGGRTSEDLAGELGVT
                     VSRVSQLRTEAFDMLRHGITAQYAGERPVPAERLSPRVLR"
     gene            complement(886..>2660)
                     /locus_tag="VKX24_03285"
     CDS             complement(886..>2660)
                     /locus_tag="VKX24_03285"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ07531.1"
                     /translation="RGWSLRAQLAVALVASVALFGAAAALLTARSYHDDRAAAGRQLA
                     TLARAAASKLDSQVAQSEQVLAGIAAQDAITALDPGRCGLVLGGFRGLGPGYLALVGP
                     DGDVLCSSRPAGELTPAAFAAAGWVADARRAGRAVHAEPVADPVTQRPMMVLATPVPA
                     AAAAGTAPAGKRPPAVLAAVLDLDGFAPDLVGPLDADRGTVVAAVDAAGSTVLFRNPG
                     HYAGRPITTGNPGTSLFQAKGFDGVERIFRAVTAPQLGWHVYAGTPVSVAFAAAHRTV
                     AHSIALTLVVFCMLALLTGLLTRRVVRPARALADAIVAARAGDDAPRAPEEGPAELAR
                     VAAEFNALQAARAAEEAGRRAADAELAERVAELGEARAELRRALVRFTELQEDERRSI
                     AQAVHDQTIQALIATMWALDDLDAEETSPHVTAVLDRARENLSAAVGAARSLLFELRP
                     PALDELGLGAALEQQLDRLGQETGIAVAFDNDVQGRLPLHVETLAFRTAQEALRNVRQ
                     HASARSARVAIRRYDDRLEVDVDDDGVGVRPADLVASGPARAGIVGMREAVGMHGGTF
                     AIGPRPAGGTRVSFSLPLAGPSAA"
BASE COUNT          338 a          954 c         1056 g          312 t
ORIGIN      
        1 gcggaggacc cggggggaga ggcgctcggc ggggaccggc cgctcgccgg cgtactgcgc
       61 cgtgatgccg tggcggagca tgtcgaaggc ttcggtgcgg agctgggaga cccgcgacac
      121 cgtgacgccg agttctccgg cgagatcctc ggacgtccgg ccgccgaaga agtagccctg
      181 gatgacggtg cggtggcggt cgggaaggag ggcgacggcg tcccggaggt agcccgccat
      241 ctcccggtcg cagaggtcgt cgtcgaccga tacggaatcg tcggcgaccg tcccttcgag
      301 gaagacgtcg gtgtcgccct cgccccaggt ctcgctcacc accatgtcga gccccaggac
      361 caccgtctgc agcaggcggt gctgcagctc ggcgagctcc tcgccggtca tcccgagggc
      421 cgcggccagc tcgagcgagg tcgggctgcg ccgcagctcg cccgccagcc gttcggcggt
      481 ggcttcgaca gcccggccgg cccggcgcag cgaacggggc gcccagtcgc ctttgcggac
      541 ggtgtcgagg acggcgcccc ggatccgccg ggcggcgtag ggagcgaacg gcacgccctt
      601 cgccgggtcg tagcggtgcg cggcctcgac gaggcccagc accccggccc ggaccagctc
      661 ctccttgtcg acgtgacggg ggaagtggac cgtggcctgg tacatcacgt ggcgcaccag
      721 cggcagcgtc tcttcgatca gcgccgagat gtcggggtcc agaccctggc tcacgtcggc
      781 ctcctttcgt ctccttgaat gtcggaagac gcaggaagcg gaacgatcgg ccagatcggc
      841 gattcccgtt cccccgatcg ggggaatctg gtgcggggaa gccgatcagg cggcggacgg
      901 gcccgccagc ggcagggaga agctcaccct cgtccccccg gcggggcggg ggccgatggc
      961 gaaggtcccg ccgtgcatgc cgaccgcctc ccgcatgccg acgatcccgg cccgggccgg
     1021 gccggacgcc acgaggtcgg cggggcggac cccgaccccg tcgtcgtcga cgtcgacctc
     1081 gagccggtcg tcgtagcggc ggatcgccac ccgggccgac cgggccgagg cgtgctggcg
     1141 tacgttgcgg agggcctcct gggccgtccg gaaggccagc gtctcgacgt ggaggggcag
     1201 gcgcccctgg acgtcgttgt cgaaggcgac ggcgatgccc gtttcctggc cgagccggtc
     1261 gagctgctgc tcgagcgcgg cgccgagccc gagctcgtcg agcgccggcg ggcggagctc
     1321 gaacagcagc gaacgggcgg cgccgacggc ggccgaaagg ttctcccggg cccggtcgag
     1381 gacggcggtg acgtggggcg acgtttcctc ggcgtcgagg tcgtcgaggg cccacatggt
     1441 ggcgatcagc gcctggatcg tctggtcgtg gacggcctgg gcgatgctgc ggcgctcgtc
     1501 ctcctggagc tcggtgaagc gaaccagggc ccggcgcagc tccgcccggg cctcgccgag
     1561 ctcggcgacg cgttcggcga gctcggcgtc ggccgcccgg cgaccggcct cctccgccgc
     1621 ccgggcggcc tggagggcgt tgaactccgc cgccacccgg gccagctcgg cggggccttc
     1681 ctccggggcc cggggagcgt cgtcccccgc ccgggcggcg acgatggcgt cggccagcgc
     1741 ccgggcgggc cttacgacgc ggcgggtcag cagcccggtg aggagcgcca gcatgcagaa
     1801 gacgacgagc gtgagggcga tgctgtgggc gacggtgcgg tgggcggcgg cgaaggccac
     1861 cgagaccggt gtgccggcgt agacgtgcca ccccagctgc ggcgccgtca cggcccggaa
     1921 gatccgctcc acaccgtcga agcccttggc ctggaacagc gacgtccccg gattgccggt
     1981 ggtgatcggg cggccggcgt agtggccggg gttgcggaac agcaccgtgc tgccggcggc
     2041 gtcgaccgcg gccacgacgg tcccgcggtc ggcatccagt gggccgacga ggtccggggc
     2101 gaacccgtcg aggtcgagga cggcggccag tacggccggc gggcgcttcc cggccggcgc
     2161 cgtgccggcg gccgccgccg ccggcaccgg cgtggcgagg accatcatcg gccgctgcgt
     2221 gaccggatcg gcgaccggct cggcgtggac ggcccggccc gcccggcggg cgtcggccac
     2281 ccatcccgcg gcggcgaacg ccgcgggggt gagctcgccg gccgggcgcg acgagcagag
     2341 aacgtcaccg tcgggcccga cgagcgccag gtatcccggc ccgagccccc ggaagccgcc
     2401 gagcaccagc ccgcagcggc cggggtcgag ggcggtgatg gcgtcctggg cggcgatccc
     2461 ggcgaggacc tgttcgctct gggccacctg gctgtcgagc ttggaggcgg ccgcccgggc
     2521 caacgtcgcc agctgccggc ccgccgcggc ccggtcgtcg tgataggagc gggccgtgag
     2581 gagggccgcc gccgccccga acagggcgac cgacgccacg agggccacgg ccagctgcgc
     2641 ccggagcgac cagccacggg
//
LOCUS       DATGJT010000191         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1373588, whole genome shotgun sequence.
ACCESSION   DATGJT010000191 DATGJT010000000
VERSION     DATGJT010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1373588"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..471)
                     /locus_tag="VKX24_03290"
     CDS             complement(169..471)
                     /locus_tag="VKX24_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07532.1"
                     /translation="MRRVLALFAGVAVVMTLAGPAWADNARKSTDQPIAVMAHGWHHD
                     GWHHGDRDDHWRHHHRYDYDGYYYRHHRYDDDDYYYDGYYDCSYYRHHYYRHHDCY"
     gene            complement(685..1107)
                     /gene="trxA"
                     /locus_tag="VKX24_03295"
     CDS             complement(685..1107)
                     /gene="trxA"
                     /locus_tag="VKX24_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010079736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HLJ07533.1"
                     /translation="MAQIVSCPNCGKKNRVPLSAAGIPRCASCHTNLPWLVEAGEADF
                     AEAVSSRVPVLVDLWAPWCGPCRMVAPGVERAATELAGQLKVVKVNVDEAPGVSARFG
                     VQGIPTLLVLRDGEPVARQVGALPPDQLLAWARAAAAG"
     gene            complement(1149..1862)
                     /locus_tag="VKX24_03300"
     CDS             complement(1149..1862)
                     /locus_tag="VKX24_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020630099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HLJ07534.1"
                     /translation="MRRRRRRPVDAVLDDHAIPAGPAEPGDAELLRAAIELRQADPGA
                     GVPTEAFVDQLRDRLAAELDAPGRRSPTGPPTAAPGRIPRRALLAGAGAAVAAGVAGV
                     VVDRTLLKADRRGTGTAAGPREVDPFDGAWVPVAPAAAVADGAARPFTTPGVVGFVST
                     TAGGEPLAVSGACTHRGCLLRLNADAGRLDCPCHRTAFALDGRTLFHQLPAEPPPLPR
                     LRARRTGDQIEVFVPTERS"
     gene            complement(1859..2428)
                     /locus_tag="VKX24_03305"
     CDS             complement(1859..2428)
                     /locus_tag="VKX24_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003088311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HLJ07535.1"
                     /translation="MGDEAPADDATRPRPELRAVAPAADRYADWREVYDDNVVRIHRL
                     MYAKVGNRPDAEDLTAEVFLAALGPMRLSVSRGEVRAYLLRAAQTVLASYWRRRLGVE
                     VTAIEPEAEAPAEGQGAEPAAVARSAERARRILAALPERYRRVLELRFVEGCSVRDAA
                     EAMGVSVANAKVLQHRALRLAAGLPEAAS"
BASE COUNT          311 a          877 c          924 g          318 t
ORIGIN      
        1 gtacggctct tcctccggcg ccgacatcgc ctacgggatc ggcgccgcct tcacccggcg
       61 gtgagctgcc acgccggccg cgaggcggcg gcgacgccgg cggcgactcc gacgcttttt
      121 cgagggtgtg gcgcaccttg acggtgcgcc acaccctcca gagcccggtt agtagcagtc
      181 gtgatgccgg taatagtggt gccggtagta gctgcagtcg tagtagccgt cgtagtagta
      241 gtcgtcgtcg tcgtagcggt ggtgccggta gtagtagccg tcgtagtcgt accggtggtg
      301 gtggcgccag tggtcgtcac ggtcaccgtg gtgccagccg tcgtggtgcc atccgtgggc
      361 catgacggcg atcggctggt cggtcgactt ccgagcattg tccgcccacg ccggccctgc
      421 gagcgtcatg accacagcga ccccggcgaa aagggcgagc actctgcgca tgcactttct
      481 ccttctcccc cggcgtcccg gccgggtgct cggccgatag ggactcgttc gtcagtgcgc
      541 tctgacgggg cagtgctgct gacccccagc gaacgaatcg gtcataacac ccatagttag
      601 ccgtggcaac tattctggac gctctgtgac gtcggtaagg gcgtccctcc cgctcggagg
      661 tcgggggggg tcggacgctg aagatcagcc ggccgcggcg gcgcgggccc aggccagcag
      721 ctgatccggg ggcagtgccc cgacctggcg ggcaacgggc tccccgtcgc gcaggaccag
      781 caacgtggga atgccctgaa cgccgaagcg ggccgagaca cccggcgcct cgtccacatt
      841 gaccttgacg accttgagtt gcccggccag ctcggtggcg gcccgttcca cacccggcgc
      901 caccatccgg caggggccgc accacggagc ccacaggtcg acgagcaccg gcacccggct
      961 cgacacggcc tcggcgaagt cggcctcgcc ggcctcgacg agccatggca ggttcgtgtg
     1021 gcaggaggcg cagcggggaa ttccggccgc cgaaagcggc acccggttct tcttcccgca
     1081 gttgggacag gagacgatct gcgccatcga ggtctccaac cgccggcgac gctcgcctat
     1141 ttcgaacctc aggagcgctc ggtggggacg aagacctcga tctggtcgcc ggtgcggcgg
     1201 gcccgcaggc ggggcagcgg cggcggctcg gcggggagct ggtggaacag ggtgcggccg
     1261 tcgagggcga aggccgtgcg gtggcagggg cagtccagcc ggccggcgtc ggcgttgagc
     1321 cggagcaggc agccgcggtg ggtgcaggcg ccggacacgg cgaggggctc gccgccggcg
     1381 gtggtgctca cgaagcccac gacccccgga gtggtgaagg gacgggcggc gccgtcggcc
     1441 accgccgccg ccggcgccac cggcacccag gcgccgtcga aggggtcgac ctctctcgga
     1501 ccggcggccg tccccgtacc gcggcggtcg gccttgagca gggtccggtc gacgacgacg
     1561 ccggccacgc ccgccgccac cgccgccccc gccccggcca gcagcgcccg cctcggaatg
     1621 cgcccaggtg cggcggtcgg cgggccggtc ggggaccggc ggcccggggc gtcgagctcg
     1681 gcggccaggc ggtcgcggag ctggtcgacg aacgcctcgg tcggcacccc ggcgccgggg
     1741 tcggcctggc ggagctcgat ggccgcccgg agcagctcgg cgtcgcccgg ctccgccggc
     1801 ccggccggga tggcgtggtc gtcgagcacg gcgtcgaccg gacggcggcg ccggcgcctc
     1861 acgacgccgc ctcgggcagg ccggcggcca ggcgcagggc ccggtgctgg aggactttgg
     1921 cgttggccac gctcacgccc atggcctcgg cggcgtctcg caccgagcac ccttcgacga
     1981 aacggagctc cagcacccgg cggtagcgct cgggcagggc ggccaggatc cgccgggccc
     2041 gctcggccga gcgggcgacg gcggccggct cggcgccctg gccctcggcc ggggcctcgg
     2101 cctcgggctc gatggcggtc acctccaccc cgagccgccg gcgccagtac gacgccagca
     2161 ccgtctgggc cgcccgcagc agataggccc ggacctcgcc ccgggatacc gacagccgca
     2221 tcggcccgag ggcggcgagg aacacctcgg cggtgaggtc ctcggcgtcg gggcggttgc
     2281 ccaccttggc gtacatcagc cggtggatgc ggacgacgtt gtcgtcgtag acctcccgcc
     2341 agtcggcgta gcggtcggcg gccggcgcca cggcccgcag ctccggccgc ggccgggtgg
     2401 cgtcgtcggc gggcgcctcg tcgccgatct
//
LOCUS       DATGJT010000192         3957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_25454, whole genome shotgun sequence.
ACCESSION   DATGJT010000192 DATGJT010000000
VERSION     DATGJT010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3957
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25454"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VKX24_03310"
     CDS             <1..221
                     /locus_tag="VKX24_03310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07536.1"
                     /translation="AGVLAGDDPASAPDGRLPALVGPRPKVGSPLVRVAVLVDVTALV
                     ALLSAALTVRRRRGLRVRAPRRAPALRD"
     gene            361..1017
                     /locus_tag="VKX24_03315"
     CDS             361..1017
                     /locus_tag="VKX24_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013257934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HLJ07537.1"
                     /translation="MSAAVATLSEAESKALLARHGVPVPAEAVVDDPAGAAEAAAGIG
                     FPVAVKLCGPAIAHKTERGLVKLGLREAAAVEAAGAELLAAARPEDGDVALLVSAMVA
                     GARELIAGFVRDDDFGPCVMLGIGGILAEAVGDVAFRLAPLDAVDAEDLIDDLAHGAL
                     LGPVRGEPPVDRAALAGILLGLSALGGDDERIRSIDLNPLIVSGGVPVAVDALVELDG
                     "
     gene            1014..2468
                     /locus_tag="VKX24_03320"
     CDS             1014..2468
                     /locus_tag="VKX24_03320"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HLJ07538.1"
                     /translation="MTLRSLFEPNGVIVVGASSHPAKFGFVALHNVLAQGFPGRVFAV
                     NRDGGEILGLPTATDIGDLPSGEADLAVVCTPATANPGVLQACAAKGVKAAYVVSGGY
                     RETGAEGRRAEEELVALADKLGMVLAGPNGQGLISTPARLCAQIVGPYPVAGTISVAS
                     QSGNATSSFMNYANHSGVGIARAVSAGNAAAVTVADYLEWFGADAATGVAFAYLEHSA
                     DGRATFEKIRSVTSVKPVVMVKGGVSRAGQQAAASHTGALAGEQRIFTGAMRQAGVCL
                     VPTVEEAFDAAATFATQPRPKGPNTVVVTTAGGWGVMTADALASSSLRLMPLPDDLRA
                     AIDTRLPPRWSRGNPIDMAGGEGRDTVPEVLDLVAAHPAVDAVLFLGLGIQSNSARLL
                     RDGRFHPDHGLERVVAFHERQDRRFAEAAAAASDASGKPVLTATELAVTDPANPGPAA
                     VRGTGRYCCPSANRAVTALDHLWRYARFRERRGG"
     gene            complement(2481..3578)
                     /locus_tag="VKX24_03325"
     CDS             complement(2481..3578)
                     /locus_tag="VKX24_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07539.1"
                     /translation="MRRRPLISVVLLCALLAGCVHHSSNRSAPPTSRTGGSTATTAAS
                     TPPPSNLHDASFNSAQNGWGLTEEPCAAAGPAGRCAVVWKTTDGGTSWTRLAQLDVLT
                     GGAAGTDVVDALRFADSEHGWLYDRDLFATFNGGKRWQRVDLGNPVVALDVAGSQAFA
                     LVGDCGSGAGNCDGPMKVAEGTVSTGRWRFAAVGADLPSADSGSVIVNGTNVYAQIGA
                     VFLARTGTERWERRTLPCPRPMAAPITDGDGLVAACLPAIPGGPAELQTSSDGGRSWA
                     VVWHYNFPTPLTSLVVTGSTAVVGVDSGDVMRTTDNGLHFTTVLHAGADPALQFSDAD
                     HGVLTAGPAGGRQLFSTADGGATWRSLAPPH"
     gene            complement(3636..>3957)
                     /locus_tag="VKX24_03330"
     CDS             complement(3636..>3957)
                     /locus_tag="VKX24_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HLJ07540.1"
                     /translation="SPNVGLRNEQFRAYADHMATAEFAAAVSELRAVAGRRAAVVMCA
                     EGLWWHCHRRLLADHLVVVEGLSVEHLFHDGRLAPHPVTPEARRAGGHLVYDLGVDHR
                     LFDG"
BASE COUNT          491 a         1445 c         1506 g          515 t
ORIGIN      
        1 ccgccggcgt gctggccggc gacgacccgg cctcggcgcc cgacgggcgc ctccccgccc
       61 tggtcgggcc ccggcccaag gtcggctcgc cgctggtgcg ggtcgccgtc ctcgtcgacg
      121 tgacggccct cgtggcgctg ctgtcggcgg cgctgaccgt ccgccgccgg cggggcctcc
      181 gggtgcgagc accgcgccgc gccccggcgc tccgggactg agccgccgct cgcgggcggt
      241 gcgtcggagc ttctccggtc atgaacctgc gtatgtcgcg ggttgatgac cacagaacgg
      301 ccggacgccg gcattcggcc tagattgccc cgacgtgatc accgatttcg aatggagcgg
      361 gtgagcgccg cggtggcgac gctctcggaa gcggagtcga aggcgctgct ggcccggcac
      421 ggcgtgccgg tgccggccga ggcggtggtg gacgatccgg cgggggcggc cgaggccgcg
      481 gcggggatcg gatttcccgt cgccgtcaag ctctgcggtc ccgccatcgc ccacaagacc
      541 gagcggggcc tggtgaaact cggcctgcgg gaggcggcgg ccgtggaggc ggccggcgcc
      601 gaactgctgg ccgccgcccg cccggaggac ggcgacgtcg ccctgctggt ctcggccatg
      661 gtggcggggg cccgggagct catcgccggc ttcgtgcgcg acgacgactt cggcccctgc
      721 gtcatgctcg gcatcggcgg gatcctggcc gaggccgtcg gcgacgtcgc cttccggctg
      781 gcgccgctcg acgccgtcga cgccgaggac ctcatcgacg acctcgccca cggggcgctg
      841 ctcgggccgg tgcggggcga accgcccgtc gaccgggcgg cgctggccgg gatcctgctc
      901 ggcctctcgg ccctcggcgg cgacgacgag cgcatccggt cgatcgacct caacccgctg
      961 atcgtctcgg gcggcgtgcc ggtggccgtc gacgccctcg tcgagctcga cggatgacgc
     1021 tgcgctccct gttcgaaccg aacggcgtca tcgtcgtcgg ggcgtcgagc cacccggcca
     1081 agttcggctt cgtcgctctc cacaacgtgc tggcgcaagg gttccccggc cgggtgttcg
     1141 ccgtcaaccg cgacgggggc gagatcctcg ggctcccgac ggcgaccgac atcggcgacc
     1201 tcccgtccgg cgaagccgac ctcgccgtcg tctgcacgcc ggcgacggcc aaccccggag
     1261 tgctgcaggc ctgcgccgcc aaaggggtca aggcggccta cgtcgtgtcc gggggctacc
     1321 gggagaccgg ggccgagggc cggcgggccg aggaggagct ggtggcgctg gccgacaagc
     1381 tcggcatggt gctggccggc cccaacgggc agggcctgat ctcgacaccg gcccggctct
     1441 gcgcccagat cgtcggcccc tacccggtgg cgggaaccat ctcggtggcc agccagtcgg
     1501 gcaacgccac ctcgtcgttc atgaactacg ccaaccattc cggtgtcggc atcgcccggg
     1561 cggtgagcgc cggcaacgcc gccgccgtga ccgtggccga ctacctggag tggttcggcg
     1621 ccgatgccgc caccggcgtc gccttcgcct acctggagca ttccgccgac ggccgggcga
     1681 cgttcgagaa gatccgttcg gtcacctcgg taaagccggt ggtaatggtg aagggcgggg
     1741 tgagccgggc cggccagcag gcggcggcgt cccacaccgg ggcgctggcc ggggaacagc
     1801 gcatcttcac cggcgccatg cgccaggccg gggtgtgcct cgtgcccacg gtggaagagg
     1861 cgttcgacgc cgccgccacc ttcgccaccc agccgcggcc gaaaggcccg aacaccgtgg
     1921 tggtgaccac cgccggcggg tggggcgtga tgacggccga cgccctcgcc tcgtcgtcgt
     1981 tgcgcctgat gccgctgccc gacgacctgc gggccgcgat cgacacccgg ctgccgcccc
     2041 ggtggagccg gggcaacccg atcgacatgg ccggcgggga aggccgcgac accgttcccg
     2101 aggtcctcga tctcgtggcg gcccacccgg ccgtcgacgc cgtgctcttc ctcgggctcg
     2161 gtatccagtc caacagcgcc cggctgttgc gggacggccg cttccatccc gaccacggcc
     2221 tcgagcgcgt cgtcgccttc cacgaacgcc aggaccggcg cttcgccgaa gcggcggcgg
     2281 cggcgtccga cgccagcggg aaaccggtgc tgacggccac ggagctcgcc gtcaccgatc
     2341 ccgccaaccc cggcccggcg gcggtgcggg gcaccggccg ctactgctgc ccgtcggcca
     2401 accgggccgt caccgccctc gaccacctct ggcgctacgc ccggttccgg gagcgtcgcg
     2461 gcggctgaag gcgttctggc tcagtggggc ggagccagcg accgccaggt ggcgccgccg
     2521 tcggcggtgc tgaacagctg ccggccgccg gccgggccgg cggtgaggac gccgtggtcg
     2581 gcgtcgctga actgcaacgc cgggtcggcc ccggcgtgga ggaccgtcgt gaagtgcagg
     2641 ccgttgtcgg tcgtccgcat gacgtcgccg ctgtcgacgc ccacgacggc ggtgctgccg
     2701 gtgacgacca gcgacgtgag cggtgtgggg aagttgtagt gccagacgac ggcccagctg
     2761 cggccgccgt ccgacgaggt ctgcagctcg gcggggccgc cggggatggc cggcaggcag
     2821 gcggccacga gcccgtcgcc atcggtgatc ggcgccgcca tcgggcgcgg gcaggggagc
     2881 gtgcggcgct cccagcgttc ggtgccggtc cgggccagga agaccgcgcc gatctgggcg
     2941 tagacgttcg tcccgttcac gatcaccgaa ccgctgtcgg cggagggcag gtcggccccg
     3001 acggcggcga agcgccaccg gccggtggag accgtgcctt cggccacctt catcgggccg
     3061 tcgcagttgc cggcgcccga gccgcagtcc ccgacgaggg cgaaggcctg gctgccggcc
     3121 acgtcgagcg ccaccacggg gttgccgagg tcgacgcgct gccaccgctt gccaccgttg
     3181 aaggtggcga agagatcccg gtcgtagagc cagccgtgct cgctgtcggc gaagcgcagg
     3241 gcgtcgacga cgtcggtacc cgccgcgccg ccggtcagca cgtcgagctg cgccagacgg
     3301 gtccacgacg taccgccgtc ggtggtcttc cacacgacgg cgcaccggcc ggccggtccc
     3361 gcggcggcac atggttcctc cgtgaggccc cagccgttct gggcgctgtt gaacgaggcg
     3421 tcgtggaggt tcgacggcgg cggggtcgag gcggcggtgg tggcggtgga tccgcccgtc
     3481 cggctggtgg gcggtgccga ccggttcgac gagtggtgga cgcagcccgc cagcagggcg
     3541 cagagcagca ccacggagat cagggggcgt cgccgcacgg cgcccattac agcctgattc
     3601 cggaggccgg gcgcgccgtc ggcgtctctg gaccgtcagc cgtcgaacaa ccggtggtcg
     3661 acgccgaggt cgtagaccag gtgcccgccg gcccggcggg cctccggcgt gaccgggtgg
     3721 ggggccagcc gcccgtcgtg aaagagatgc tcgacggaga gaccctcgac gacgacgaga
     3781 tggtcggcca gcagccggcg gtggcagtgc caccacaggc cctcggcgca catcaccacc
     3841 gccgcccggc gcccggccac cgcccggagc tcggagacgg cggcggcgaa ctccgccgtg
     3901 gccatgtggt cggcgtaggc ccggaactgt tcgttgcgca gcccgacgtt gggcgag
//
LOCUS       DATGJT010000193         2149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_648135, whole genome shotgun sequence.
ACCESSION   DATGJT010000193 DATGJT010000000
VERSION     DATGJT010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648135"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..1265
                     /locus_tag="VKX24_03335"
     CDS             147..1265
                     /locus_tag="VKX24_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07541.1"
                     /translation="MRAAAVGAGSLLAAVAVLLPAAAQGALARTPFTASLNLVQTLAS
                     TVPKNGDVNPYGIAVVPASKGDLTAGDVLVSNFNAKSNRQGTGTTIVEISPGGKVKLF
                     ARLAPASPAGACPGGVGLTTALVALRSGYVVAGSLPSANGHSATMHAGCLLILDSVGH
                     LVTTIAGSPINGPWDMTALDRGSSALLFVTNVLNGTVASSPNTVDQGTVVRLDLSTPA
                     GGTPSVESETIIGTGFPERTDPGALVVGPTGVAIGSQGTLYVANSAANRITAISGAVA
                     RTSPSRGTTLASGGWIDDPLGLAIAPGGDILTTNGADGNLVETTPAGNQVAVKMLDTI
                     PVPPGPNGNGTLFGLILAPRGTGVYFVDDGGNDLNLLH"
     gene            complement(1829..>2149)
                     /locus_tag="VKX24_03340"
     CDS             complement(1829..>2149)
                     /locus_tag="VKX24_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013422621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HLJ07542.1"
                     /translation="NIMIISVLERRSEIGLRRALGATKGHIRVQFLGEAILLALLGGL
                     AGVVLGVIATAVYAHTKHWATVIPTLAWAGGLAAAFAIGAVAGLLPAIRAARLSPTDA
                     LRTV"
BASE COUNT          330 a          789 c          750 g          280 t
ORIGIN      
        1 cgcgacccgc ggccgcctgt attccggtcc gcccgagcgc cgacgcgaaa ccggaccggg
       61 ctccggtccg tagtcatccg atccgtcgcg tcggaatcac gacctggagg tgcgccatgt
      121 tcacttgccc atccagacgg agccgggtgc gagcggccgc ggtcggcgcg ggttcgctgc
      181 tcgccgcggt cgccgtccta ctgcccgcgg cggcccaggg cgcgctcgcc cggacgccgt
      241 tcaccgcatc gctcaacctc gtccagaccc tggcctcgac cgtgcccaag aacggtgacg
      301 tcaacccgta cggtatcgcc gtcgtccccg cgagcaaggg cgacctcacg gccggtgacg
      361 tcctggtcag caacttcaac gccaagtcca accgccaggg cacggggacg acgatcgtcg
      421 agatctcccc cgggggcaag gtcaagctgt tcgcgaggct ggccccggcg tcccccgccg
      481 gcgcctgccc cggcggggtc gggctcacca ccgccctggt ggccctccgg agcggatacg
      541 tcgtggccgg cagcctcccc agcgccaacg gccactcggc caccatgcac gccggctgcc
      601 tgctgatcct cgactccgtc ggacacctgg tcacgacaat cgccgggtcg ccaatcaacg
      661 gcccctggga catgacggcg ctcgacagag gatcgagcgc gctcctgttc gtgaccaacg
      721 tcctcaacgg caccgtcgcc tcgagcccca acacggtcga ccaggggacg gtcgtccgcc
      781 tcgacctctc gaccccggcg ggggggactc cgagcgtcga atccgagacg atcatcggaa
      841 ccggcttccc cgagcgcacc gaccccggcg cgctcgtcgt cggcccaacc ggggtggcga
      901 tcggctctca gggaacgctc tacgtcgcca acagcgccgc caaccggatc acggccatct
      961 cgggcgcggt cgcgcgcacg agccccagcc gggggacgac cctcgcgagc gggggatgga
     1021 tcgacgatcc gctggggttg gcgatcgcgc cgggcggtga catccttacc accaacggcg
     1081 ccgacggcaa cctggtcgag acgacgccgg ccgggaatca ggtggcggtc aagatgctcg
     1141 acacgatccc cgttcccccc gggcccaacg gcaacgggac gctgttcggc ctcatcctcg
     1201 cgccccgggg cacaggcgtc tacttcgtcg acgacggtgg caacgacctc aacctgctcc
     1261 actgacaggc cgtccgagcc acgagccacc ccgcggctgg ctcggtgcct caccgaccgg
     1321 gtgggggcgg tcggttcggc cgaaacgggc gtcggccctg accggcgctc gtcgagtctc
     1381 aagccgaccg ggtcgcgcgt caaaccgagg cggccacgag ccttggcggt ggcgggcctg
     1441 acttgtcggg cggcgacggt cgacaccacc ggcagatccg gttcaggagg cggcgggttt
     1501 tggccaggcc ggcgtcggcg cccgggcatg aaccggggat ccgacgggca tgacaatgac
     1561 acaggccggc gggacgggaa gccggcgaac cgggttcgag gtcaggctcg ccaagggcga
     1621 ggtgctgagc gtacgctcgt agccggagcc gtcacatcgt cgctcggcga gtcgccttcg
     1681 accaggatcc gctcgacccg ggcaacgtgc tcccggccga gatcgggcag accggcggcc
     1741 gcttgttcgg cggccgtacc tacctcgaga cgatctccag ggtggccgag ctttcgacca
     1801 cagggtaggt cgccgagcgc cggcggcatc agacggtgcg cagcgcgtcg gttggtgaga
     1861 gccgggcggc gcggatcgcg ggcagcaacc ccgccaccgc gccgatcgcg aacgccgcgg
     1921 ccaggccacc ggcccaggcc agggttggga tgaccgtggc ccagtgcttg gtgtgggcat
     1981 agaccgcggt cgcgatcacc cccaggacaa cgccggcgag gccgccgagg agcgcgagca
     2041 ggatcgcctc gcccaggaac tgcacccgga tgtgcccctt ggtggcgccg agggcgcggc
     2101 gaagcccgat ctcggaccgg cgttcgagga cggagatgat catgatgtt
//
LOCUS       DATGJT010000194         2028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_751683, whole genome shotgun sequence.
ACCESSION   DATGJT010000194 DATGJT010000000
VERSION     DATGJT010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751683"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VKX24_03345"
     CDS             <1..334
                     /locus_tag="VKX24_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013422375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ07543.1"
                     /translation="SDPSMRGRVMALWSVAFLGSTPVGGPIIGVVGEHLGARWSLVVG
                     GVAAVAAGAYGLVGLRLAARRAAAQPGPAAPVVVSVTGDGPPDCLVAEASTDAPSDAL
                     LAGTGTAG"
     gene            complement(391..1248)
                     /locus_tag="VKX24_03350"
     CDS             complement(391..1248)
                     /locus_tag="VKX24_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07544.1"
                     /translation="MATALITGSRHRTALLDGPLRAHGDDVLVADSRDGIAALAARLP
                     ARSVGAYVQLLMDADAGPSWAPPVTERIETVALVAPLLAPEAAVVLVADDPADPAHDP
                     RVADGLCLLAEAALSGAESAGVVRVSGVRVSVLPEASAEAISRMLGHEAVVTGPLADL
                     GADRDYADWRTDILSLTSCGDATYFGWLNQDGRPRIGRLRGSVLSPLAVGPDDAAGLW
                     GRADAGAEALGRALIADTLGGQPVDDGLVAGFAKDVIGSLPAGGFELSAGEVRRWLRD
                     QLGRPPATA"
     gene            1443..1871
                     /locus_tag="VKX24_03355"
     CDS             1443..1871
                     /locus_tag="VKX24_03355"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015718176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HLJ07545.1"
                     /translation="MPARSANARWEGGLKDGKGNMRLGGGAFEGQYSFSSRFEEGAGT
                     NPEELIAAAHAGCYSMALSAGLEKAGYSPNSVETEAKVHLSPADGGFRISRIDLVSSA
                     DVPGIDDGAFQQAAQAAKEGCPVSKALSAVEITLDATLAG"
BASE COUNT          254 a          750 c          814 g          210 t
ORIGIN      
        1 ctccgatccc tcgatgcggg ggagggtcat ggccctgtgg tcggtggcct tcctcgggtc
       61 gacgcccgtc ggcggcccca tcatcggcgt ggtcggcgag cacctcggcg cccgctggag
      121 cctcgtcgtc ggcggggtgg cggcggtggc ggccggggcc tacggcctcg tcggcctccg
      181 cctcgccgcc cgccgggcgg cggcgcagcc cgggccggcg gcgccggtgg tggtctcggt
      241 caccggcgac ggcccgcccg actgcctcgt ggccgaggcg agcaccgacg ccccgagcga
      301 cgccctgctg gccgggaccg gcacggcggg ctgagcggcc ggcgggtcag gccgccggtc
      361 gaacggcgaa gcggctgagc ggccggcggg tcaggccgtg gccggcggac ggcccagctg
      421 gtcccggagc cagcggcgga cctcgccggc cgaaagctcg aagcccccgg ccggcagcga
      481 gccgatgacg tccttggcga agcccgccac gagcccgtcg tcgaccggct ggccgccgag
      541 ggtgtcggcg atcagcgccc ggccgagggc ctcggccccg gcgtcggccc tgccccacag
      601 gccggcggca tcgtcggggc cgacagcgag gggggagagc accgaccctc gcaggcgccc
      661 gatcctcggc cgcccgtcct ggttgagcca cccgaagtag gtggcgtcgc cgcagctggt
      721 gaggctcagg atgtcggtcc gccagtcggc gtagtcccgg tcggcgccga ggtccgccag
      781 cggcccggtg accaccgcct cgtggcccag catccggctg atcgcctccg ccgacgcctc
      841 gggcaggacg ctgacccgca cgccgctgac ccgcacgacg ccggcggact cggcgcccga
      901 cagggcggcc tcggccagga ggcagagccc gtccgccacc cggggatcgt gggccgggtc
      961 ggccgggtcg tcggccacca ggacgacggc cgcctcgggg gccagcagcg gagcgaccag
     1021 ggccacggtc tcgatccgct ccgtcaccgg cggagcccac gacgggccgg cgtcggcgtc
     1081 catcaggagc tgcacgtagg cgccgaccga ccgggccggc aggcgggcgg cgagagcggc
     1141 gatgccgtcg cggctgtcgg ccacgaggac gtcgtcgccg tgggcccgca gcggtccgtc
     1201 gagcagcgcg gtgcggtgcc gggatccggt gatgagagca gtcgccatgc gaccgaccct
     1261 aacggagacc ccggacggcg cagggcgcgg gaagcctgaa attgagccct ggctatgcaa
     1321 tcgtcatcgg ggggaaacac cggggaaacg ccggccgggc ggcggccggc cgggggtagg
     1381 ctgaccggcc cggagcggcg ccgacggacg ctgcgaccac gaccgcaacg aggaggagag
     1441 ccatgcccgc acgcagcgcc aacgcccgct gggaaggcgg cctgaaggac ggcaagggga
     1501 acatgcggct cggcgggggc gccttcgagg ggcagtactc cttctcgtcc cgcttcgagg
     1561 agggcgccgg caccaacccc gaggagctca tcgccgccgc ccatgccggg tgctactcga
     1621 tggccctgtc ggcggggctg gagaaggccg gctacagccc gaactcggtg gagaccgagg
     1681 ccaaggtcca cctgagcccg gccgacggcg ggttcaggat ctcccgcatc gacctcgtct
     1741 cgtcggccga cgtccccggc atcgacgacg gcgccttcca gcaggcggcc caggcggcca
     1801 aggaggggtg cccggtgtcg aaggcgcttt ccgcggtcga gatcaccctc gacgccacgc
     1861 tggccggcta accgcgggcg gggcgggccc gccggtcagc ggccgcagag ccggacggcg
     1921 tcgccgacgt gggtgcagcc ctcgtcgccc ggcggggcgg cggggtcgcc ggacgccggc
     1981 ggggtggaag gccccggccc gggcgccggc gtttccgggg ccgggcgg
//
LOCUS       DATGJT010000195         2267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1374403, whole genome shotgun sequence.
ACCESSION   DATGJT010000195 DATGJT010000000
VERSION     DATGJT010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374403"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..1471
                     /gene="gcvPA"
                     /locus_tag="VKX24_03360"
     CDS             104..1471
                     /gene="gcvPA"
                     /locus_tag="VKX24_03360"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006904758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HLJ07546.1"
                     /translation="MGDYLPHTEEDVETMLAFLGLSSTEELFAAVPAALRLSGGIALE
                     VGVPEPDALALARSRASRNAQGLVCFAGAGAYDHEVPPVVRALAGRSEFVTAYTPYQA
                     EVAQGGLQAIFEFQTMVSRLFGLPIANASLYDGASAVVEAANLAVGATGRDGVLVSAG
                     VHPHWRAVLATFARGTGHRLVEVPLRAGKTDWSAAGATPAIGAVVVGYPNYLGCLEDL
                     AAARARADEEGALLVVAADPVAAGILKSPGEWGADVAVGEGQAFGTALSFGGPYLGLF
                     TCAAAHVRRLPGRLVGETVDAEGRTAYVTTLRTREQDIRREKATSNVCTNQTLMALTA
                     AVQLGWLGTTGLAEVATRCARGARYCREALLTLDGVDPLTGATPTLREFAVALPLPAP
                     ALVARLAEEGFLAGVAVGDLVGEGGDGSVGAADAERALLVAVTERRTRSEIDRFVAAF
                     DKALR"
     gene            1468..>2267
                     /locus_tag="VKX24_03365"
     CDS             1468..>2267
                     /locus_tag="VKX24_03365"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798537.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     forms a heterodimer with subunit 1 to form the P protein;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HLJ07547.1"
                     /translation="MSRAAGGRAASAPLVGRASEPTIFELSRPGRTSWQLPTTGLEGP
                     GLDELVPAEHRRAEPAPIAEVSERDLVGHFTRLSHRQYSVDLGAYPLGSCTMKYNPKV
                     CDAVAALGGLADAHPAAPAPLTQGWLATLVGLERALCELSGMAAATLQPAAGAAGELT
                     GLLLMRAYDESRGERRRRVVIPDSAHGTNPASVTLGGYEVTTVRSDGRGCVDVAALRE
                     VLDDDVAGMMLTNPNTLGLFEDDIVEIAAAVHEVGGLMYYDGANLNAIL"
BASE COUNT          257 a          883 c          844 g          283 t
ORIGIN      
        1 agccgccggg ctcaaggccg gcgacccggt caccgtcgag gtgcggggcc gggagctccc
       61 gggccgcctc gccccgctgc ccttctacaa gcgggcggcc tgagtgggcg actacctccc
      121 ccacaccgaa gaggacgtcg agaccatgct ggccttcctc gggctgtcct cgaccgagga
      181 gctgttcgcc gccgtccccg ccgccctgcg gctgtcgggc ggcatcgccc tcgaggtggg
      241 cgtccccgag cccgacgccc tcgcgctcgc ccggtcccgg gcgtcgcgca acgcccaagg
      301 cctcgtctgc ttcgccggcg ccggcgccta cgaccacgag gtgccgccgg tcgtgcgcgc
      361 cttggccggc cgttcggagt tcgtgaccgc ctacaccccc taccaggccg aggtggccca
      421 gggcggcctg caggcgatct tcgagttcca gacgatggtg agccgcctct tcggcctgcc
      481 gatcgccaac gcctcgctct acgacggcgc gagcgccgtg gtcgaggcgg ccaacctggc
      541 cgtcggcgcc accgggcgcg acggggtgct ggtctcggcg ggcgtgcacc cgcactggcg
      601 ggcggtgctc gccaccttcg cccgggggac cgggcaccgc ctggtcgagg tcccgctccg
      661 ggccgggaag accgactggt cggcggccgg ggcgacgccg gcgatcggcg ccgtggtcgt
      721 cggctacccc aactacctcg gctgcctgga ggacctggcg gcggcgcgcg cccgcgccga
      781 cgaggagggc gcgctcctcg tggtggcggc cgacccggtc gcggccggga tcctgaagag
      841 cccgggggag tggggcgcgg acgtggcggt gggcgagggc caggccttcg gcaccgccct
      901 ctccttcggg gggccctatc tcggcctctt cacctgcgcc gcggcccacg tccgccggct
      961 gcccgggcgc ctcgtgggtg agaccgtcga cgccgagggc cgcaccgcgt acgtgacgac
     1021 gctgcgcacg cgcgagcagg acatccgccg tgagaaggcc acgagcaacg tctgcaccaa
     1081 ccagaccctc atggcgctca ccgcggcggt gcagctcggc tggctcggga cgaccgggct
     1141 ggccgaggtg gccacgcgct gcgcccgagg cgcccgctac tgccgggagg ccctgctcac
     1201 cctcgacggc gtcgatcccc tgacgggggc gacgccgacg ctgcgggagt tcgccgtcgc
     1261 cctgccgctg ccggccccgg ccctcgtggc ccgcctggcc gaggaggggt tcctggccgg
     1321 cgtcgccgtc ggcgacctgg tgggcgaggg cggcgacggg tccgtgggcg ccgccgacgc
     1381 cgagcgcgcc ctgctcgtcg ccgtcaccga acggcgcacc cggtccgaga tcgaccggtt
     1441 cgtcgccgcg ttcgacaagg cgctgcggtg agccgggccg cggggggccg ggcggcgagc
     1501 gcgccgctcg tcgggagggc ctccgagccc acgatcttcg agctgtcgcg cccgggacgg
     1561 accagctggc agctgccgac gaccgggctc gaggggcccg gcctggacga gctcgtcccg
     1621 gccgagcacc ggcgggccga gccggcgccg atcgccgagg tgtccgagcg ggacctcgtc
     1681 ggccacttca cccgcctcag ccaccgccag tactcggtcg acctcggcgc ctacccgctc
     1741 ggctcctgca ccatgaagta caacccgaag gtgtgcgacg ccgtggccgc gctgggcggc
     1801 ctggccgacg cccacccggc cgcgccggcc ccgctcaccc agggctggct ggccaccctc
     1861 gtcgggctcg agcgggcgct gtgcgagctc tcgggcatgg ccgcggcgac gctgcagccg
     1921 gccgccgggg ccgcggggga gctgaccggc ctcctcctca tgcgcgccta cgacgagtcc
     1981 cgcggcgagc gccggcgccg cgtcgtgatc cccgactcgg cgcacgggac caatccggcg
     2041 tcggtcaccc tcgggggtta cgaggtgacg acggtgcgca gcgacgggcg cggctgtgtg
     2101 gacgtggccg ccctgcgcga ggtcctcgac gacgacgtcg ccgggatgat gctcaccaac
     2161 ccgaacaccc tcgggctctt cgaggacgac atcgtcgaga tcgccgccgc cgtccacgag
     2221 gtcggcggcc tcatgtacta cgacggcgcc aacctgaacg ccatcct
//
LOCUS       DATGJT010000196         3197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_338677, whole genome shotgun sequence.
ACCESSION   DATGJT010000196 DATGJT010000000
VERSION     DATGJT010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338677"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="VKX24_03370"
     CDS             <1..1027
                     /locus_tag="VKX24_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07548.1"
                     /translation="PPPDRKPLDDAQDELGAILREAHDFADKFNDSADVQHLEHVIRK
                     VLTHYAPDEPGWNVLKHWAGNVFQATPVGAAINAAHEVINRYPEFFNHLAGFLSELSG
                     VVGLIGLPAMFFPPLGTAIGVAVLGLTAASAGIKTSLYVGHARDANGNLIVSGGNLIH
                     SYVDVALSAGAVGATAVADRAVALSRGQAEEATFGKQLAKQFSKKELAKGLAAPKRVI
                     AGSLEEAGRAAAENAAREGVEKSVWKGAAKLIAKQGASTFAKTTPGYAWNRAGLVVGG
                     VGPAANSPDRSNIFGWRSVERLPHEAVGFLDRDPETPDLQLRTAPTMSNPKSPQPTVG
                     PYNGQLR"
     gene            1704..2318
                     /locus_tag="VKX24_03375"
     CDS             1704..2318
                     /locus_tag="VKX24_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07549.1"
                     /translation="MDAVLLWALPDDWVQFELLAPDVAETFDADMRRRFAGSGVDDDA
                     LTSLIAAQLQGLQEAAQDGIVLVAACPRKEAGPGDPPPGLSLTLAIGNRPPPGAEAAS
                     AGARSPEAVAFVSSALPLRLSEPDMTGFIRETRREIALPGIDPPLARFQAQAFVFPAG
                     EPGFMTVTVTTFDPSLEDDARAAARAFADTLTFVRADEPEEDPR"
     gene            complement(2323..>3197)
                     /locus_tag="VKX24_03380"
     CDS             complement(2323..>3197)
                     /locus_tag="VKX24_03380"
                     /inference="COORDINATES: protein motif:HMM:NF014741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF222 domain-containing protein"
                     /protein_id="HLJ07550.1"
                     /translation="SGRLSILQVSEVVDVASEWPHTEQGLLDAAETLSLNDLREECRR
                     VKAALVTDEDDRYRRLRKGRYIRSWTDRDGAVRLSARLTPDDGARLLTQVDSICDDMV
                     ADAKAGEWFESREAHRADALVALAQASRECDGSPDPEAAIHVWVDYDAMVRGHTIEGE
                     QCEIPGIGPIPVSVARQLANDAYLKVLVTKADDIVAVAHAGRTIPARLRTFLECRDPK
                     CIVPTCEERRGLQIDHRQPVAAGGLTRLDNLARLCRRHHYDKSVLGYRYRGGPGEWEW
                     IPPETPTPPDPAPS"
BASE COUNT          576 a         1108 c          990 g          523 t
ORIGIN      
        1 cccaccgccc gaccgcaaac ccctcgacga cgcccaggac gaactcggcg ccatcctgcg
       61 cgaagcccac gacttcgccg acaaattcaa cgacagcgcc gacgtccaac acctcgaaca
      121 cgtcatccgc aaggtcctca cccattacgc ccccgacgaa cccggctgga acgtactcaa
      181 acactgggcc ggcaacgtct tccaagccac gccggtgggc gccgccatca acgctgccca
      241 cgaagtcatc aatcggtacc cggagttctt caaccacctc gccggcttct tgtccgaact
      301 ctccggcgtc gtcggcctca tcggcctccc cgccatgttc ttcccacccc tcggcaccgc
      361 catcggcgtc gccgtcctcg ggctcaccgc cgcctccgcc ggcatcaaga cctccctcta
      421 cgtcggccac gcccgcgacg ccaacggcaa tctcatcgtc tccggcggca atctcatcca
      481 ctcctacgtc gacgtcgccc tcagcgccgg cgcggtcggt gccacggcgg tcgctgaccg
      541 agcagtcgcc ctctcccggg gacaagcgga ggaagcaact ttcggcaagc aactcgccaa
      601 gcaattcagc aaaaaggaac tggctaaagg cctggccgca ccgaaacggg ttattgccgg
      661 aagcctcgag gaggctggga gagccgcggc ggaaaacgcg gcacgtgagg gtgtggaaaa
      721 gtcggtctgg aagggcgcag cgaaacttat cgcgaagcag ggagcgagta cctttgcgaa
      781 gaccacgccc ggttacgcct ggaaccgagc cgggttggtt gtcggtggtg ttgggccagc
      841 cgcgaatagt ccagataggt caaacatctt cggctggcga tccgtcgaac gccttcctca
      901 cgaggctgtg gggtttctgg accgcgaccc ggaaaccccc gacctgcaac tgaggactgc
      961 accgaccatg agtaatccaa aatcgccaca accgacggtt ggaccctaca acggccaact
     1021 ccggtaatgc tcgacgaata ggagcattaa tgtgcggtga gccgaagcac agcgacgggc
     1081 attctcgcaa aatggcgcct gagccgtatt ccttcctccc agaaccggaa tacattctgc
     1141 gagatccatc cgatcctccc cgagagggtt ggtggaacga ccccttgtct tctgatgacg
     1201 tgactcagcg atattatgac gggtcgcagt ggacgccata tgtctgtggg agaacggcga
     1261 ggaactggac tgacattttc caagaccgaa ttaataccga ggtcgatccc gacacgctgg
     1321 ggattccagg acccccaatc cttcctgagg atccgcctga accgctcgta gcaggctggt
     1381 ggagagatcc gattgagcgc aatctcaggc aggcccgcta tttcgacggc aggcaatgga
     1441 ctgagcttgt tgcccccacc aagtcggcgg ggccgcgact ggtcacacga cgtcgcgacc
     1501 cgaaggaagt catccgagag cagagggcgg ccaaggcggc cgcgaaagcg caagatcacg
     1561 gcgaggcccc ggcgaagcgg cactggccat ggtctcggcg tgacggctga tatggctctc
     1621 cggttgcatc tccgactgaa tggagagcaa cgaatgttcg cccgccagcc ggcgcttcca
     1681 gcgctttagc tgcgatcgct gaaatggacg ccgtcctcct ctgggcactc cccgatgact
     1741 gggtccagtt cgagctgctc gcgcccgacg tcgccgagac gttcgacgcc gacatgcggc
     1801 ggcgattcgc agggtcgggc gtggacgatg acgctctcac ttccctcatc gccgcccagc
     1861 ttcagggctt gcaggaagcg gcgcaggacg gaatcgtgct cgtcgccgcc tgcccccgga
     1921 aagaggccgg ccccggcgat ccgccacccg gcctcagcct gactctggcg atcgggaacc
     1981 ggccacctcc cggtgcggag gccgcctcgg ccggcgcccg ttcgccagaa gcggtcgcct
     2041 tcgtctcttc ggcgctcccg cttcgactgt cggaacccga catgaccggc ttcatccggg
     2101 agacgcggcg cgagatcgca ctgcccggta tcgatccacc gctcgcccgc ttccaagccc
     2161 aggccttcgt gttccccgcc ggcgaacccg gtttcatgac cgtgaccgtg acgacgttcg
     2221 accccagcct ggaagacgac gcccgggccg ccgcccgcgc ctttgccgac acgcttacgt
     2281 tcgtccgggc cgacgaaccg gaggaggatc cccgatgagc tttcagctcg gagcagggtc
     2341 cggtggagtg ggcgtttctg gcgggatcca ctcccactcc cccgggccgc cgcggtaccg
     2401 gtagcccagc accgacttat cgtaatggtg gcggcggcag agccgggcca ggttgtcgag
     2461 gcgggtcagt cccccggcgg caaccggttg gcggtggtcg atctgcagac cgcgtcgttc
     2521 ctcgcacgtc ggaacgatgc acttcgggtc gcggcactcg aggaaggtgc ggagacgagc
     2581 cgggatcgtc cggccggcgt gggccacggc gacgatgtcg tcggccttgg tgaccaacac
     2641 cttcaggtag gcgtcgttgg ccagctggcg ggcgacgctg accgggatgg gaccgatgcc
     2701 cgggatctcg cactgctcgc cttcgatcgt gtgcccgcgg accatcgcgt cgtagtcgac
     2761 ccagacgtgg atcgccgctt cagggtcggg cgatccatcg cattcgcggc tggcttgggc
     2821 cagggccacc agggcgtcgg cccggtgcgc ttccctcgac tcaaaccact cgccggcctt
     2881 ggcgtcggcg accatgtcgt cgcagatgct gtcgacctgg gtcaacagcc gggcgccatc
     2941 gtccggcgtg agccgcgccg agagccgcac ggcaccgtcg cgatccgtcc acgaccggat
     3001 gtaacggccc ttccggagac gtcggtagcg gtcgtcttca tcggtcacca gggcagcctt
     3061 gacccgccgg cattcttccc ggagatcgtt gagtgacaac gtctccgcgg cgtcgagcaa
     3121 gccttgctcg gtgtgcggcc actccgacgc cacgtcgacg acctccgata cctggaggat
     3181 cgacaagcga ccggaat
//
LOCUS       DATGJT010000197         3200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_545323, whole genome shotgun sequence.
ACCESSION   DATGJT010000197 DATGJT010000000
VERSION     DATGJT010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_545323"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /locus_tag="VKX24_03385"
     CDS             complement(<1..939)
                     /locus_tag="VKX24_03385"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HLJ07551.1"
                     /translation="MAKHIFVTGGVASSLGKGLTASSLGRLLKCRGLSVTMQKLDPYI
                     NFDPGTMNPFQHGEVFVTDDGGETDLDLGHYERFIDVALNRNSNTTAGSIYSSVIAKE
                     RRGDYLGKTVQVIPHVTDEIKERIHRLASEDADVVIVEIGGTVGDIEIVPFLEATRQF
                     RHDVGRDNVCYVHLTLVPYLAPSGEQKTKPTQHSVTELRGRGIQPDVIVCRSDQPISD
                     GLKRKISLLCDVPVEGVISAVDAPSIYEIPLVLHEEGLDRIVCKMLTIDESLHPIDVS
                     NWERVVSQVSSSDRLVRIGVVGKYINLPDAYLSVVEA"
     gene            complement(1100..1468)
                     /locus_tag="VKX24_03390"
     CDS             complement(1100..1468)
                     /locus_tag="VKX24_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLJ07552.1"
                     /translation="MATPKSFQQIVLEALRSVPEVTAPDLQSRLQNGEQIVVIDVREP
                     DEFARGKIPGAYTIPRGVLEMQVDGRLPLDSTVVLYCGGGARSALACKSLADMGYDKV
                     ENLQGGWQAWVNSRLPVEQP"
     gene            1507..2943
                     /locus_tag="VKX24_03395"
     CDS             1507..2943
                     /locus_tag="VKX24_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07553.1"
                     /translation="MRRTRRAPILIAIAVLTVALRIPAFLATRHVSFDDGVYGASAVA
                     MRTGALPFREVFSSQGPLFLPLVWLFDLVGLRTLDAPRLLSVASGLALVAATWSAARA
                     LRLRATAAAAAAALVATSGSVLWVTGPLTSDGPGLALAVGAVAAALWYRRTPSLRLAL
                     SAGALLGAALSVKSLLLGAAVPVGWALFPNRRHLGAAAGVAAGLGLAVALPWGLGRVW
                     DQAFRYHLEAAGPRTPVANLRKVLSTLGDRDLPVLLAALAALVAGLAVPNRRSMSGIQ
                     RKSKAGWTGEGGWGLVAGWLLATAVVLAAEHPLWRPHVSHLIPPAALLVASAFDRLRR
                     RLRAGAVVMVAVAACAVVPYHLVHLSEVLWPAPPGPALAAARADLRALPAGAEAISDD
                     PGVVWRAGRRTPPDLVDTSILRIDSHRITAASLARAAADRRVCAVLVWSHRFGDLAVL
                     PDGLRQAGYAPAGAYGGPKQLWRRGCAP"
     gene            2958..>3200
                     /locus_tag="VKX24_03400"
     CDS             2958..>3200
                     /locus_tag="VKX24_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07554.1"
                     /translation="MRRPVALVAVLLLTALGEYVAAPPAAEAIAAGACSISGTIDFTP
                     SAAGADHGAWAIGPAVIACRGPFRVPHPEQMNGVPGS"
BASE COUNT          375 a         1190 c         1127 g          508 t
ORIGIN      
        1 cgcctccacc accgagaggt aggcgtcggg gaggttgatg tacttgccca cgaccccgat
       61 gcgcaccagg cggtccgagg agctcacctg ggagacgacg cgctcccagt tggagacgtc
      121 gatggggtgc aggctctcgt cgatcgtgag catcttgcac acgatgcggt cgaggccttc
      181 ctcgtggagt acgagcggga tctcgtagat gctcggggcg tcgacggccg agatgacgcc
      241 ctccaccggc acgtcgcaca gcagcgagat cttgcgcttg agcccgtcgg agatgggctg
      301 gtcggaccgg cacacgatga cgtcgggctg gatgcctcgg ccacgcagct cggtgaccga
      361 gtgctgggtg ggcttggtct tctgttcgcc cgacggtgcc aggtagggca ccaaggtgag
      421 gtgcacgtag cagacgttgt cacggccgac gtcgtggcgg aactgcctgg tggcctcgag
      481 gaaggggacg atctcgatgt cgccgacggt gcccccgatc tccacgatga ccacgtcggc
      541 gtcctcggac gcgagccggt ggatccgctc cttgatctcg tcggtcacgt gcgggatcac
      601 ctggacggtc ttgccgaggt agtcgccgcg gcgctccttg gcgatgacgc tcgagtagat
      661 cgaccccgcg gtggtgttgg agttccggtt cagggcgacg tcgatgaacc gctcgtagtg
      721 gccgaggtcg aggtcggtct cgccgccgtc gtcggtgacg aagacctcgc cgtgctggaa
      781 cgggttcatc gtgccgggat cgaagttgat gtacgggtcg agtttctgca tggtcacgga
      841 gagaccgcgg cacttgagca gccggccgag ggacgaagcc gtgaggccct tcccgaggct
      901 cgacgcgaca ccgcccgtca cgaagatgtg cttggccaaa gccctactcc tcctgattca
      961 cctggggttc cgcccttgcc caaggtgtcg gagaggccgc ccccgtcccc atcatccggg
     1021 cggcactcga gtgacacgga cgaacctacc atgcccccct gtcaactccg gaggatcgca
     1081 gcttcggccg agggctgttt cacggttgct cgaccggcag cctggagttc acccaggcct
     1141 gccatccgcc ctgcaggttc tccaccttgt cgtagcccat gtcggccagg ctcttgcagg
     1201 ccagggcgga gcgggccccg ccgccgcagt acagcaccac cgtgctgtcg aggggcagcc
     1261 ggccgtcgac ctgcatctcc aacacccccc ggggaatggt gtaggcgccg gggatcttgc
     1321 cccgggcgaa ctcgtcgggc tcgcgcacgt cgatgacgac gatctgctcg ccgttctgga
     1381 gccgggactg caggtcgggc gccgtcacct cgggcaccga ccggagcgcc tcgagcacga
     1441 tctgctgaaa ggacttgggg gtcgccacgg aggcgcaggt taatgggtac cgttgccgtc
     1501 gccgtcatgc gaagaacccg ccgggccccg atcctgatcg ccattgcggt cctgacggtg
     1561 gccctgcgga tccccgcctt cctggccacc cggcacgtca gcttcgacga cggcgtctac
     1621 ggcgcctcgg cggtggccat gcggacgggc gcccttccct tccgggaggt gttctccagc
     1681 cagggaccgc tcttcctgcc gctggtatgg ctgttcgacc tcgtcggcct gcggacgctc
     1741 gacgcccccc gcctgctgtc ggtggcctcc ggcctggcgc tggtggcggc gacgtggtcg
     1801 gcggcccggg ccctgcggct cagagcgacg gccgccgccg cggccgccgc gctggtcgcc
     1861 accagcggca gcgtcctgtg ggtcaccggc ccgctgacct cggacgggcc gggcctggcc
     1921 ctggccgtcg gggcggtcgc cgccgctctc tggtaccggc ggacgccgtc gctgcggctg
     1981 gcgctctccg ccggcgcgct gctcggggcg gccctctcgg tcaagagcct cctcctcggc
     2041 gccgccgtgc cggtgggctg ggcgctgttt cccaaccgcc gccatctggg ggccgccgcc
     2101 ggcgtcgccg ccgggctggg tctcgccgtg gccctgccat gggggctcgg gcgggtctgg
     2161 gaccaggcct tccgctacca cctggaggcg gccgggccgc gcaccccggt cgccaacctc
     2221 cgcaaggtac tctccacgct cggcgaccgc gacctgcccg tcctcctcgc cgccctggcc
     2281 gcactggtgg cgggcctcgc cgtccccaac cggcgttcca tgagcggaat acagcggaaa
     2341 agcaaggccg gttggacggg ggagggcggc tggggcctcg tggccggttg gctcctcgcc
     2401 accgccgtcg tcctggccgc cgagcatccc ctgtggaggc cgcacgtctc gcatctcatc
     2461 ccgcccgcgg cgctgctcgt ggcctcggcc ttcgaccgcc tccgccggcg cctccgcgcc
     2521 ggcgccgtcg tcatggtggc ggtggcggcc tgcgccgtgg tgccctacca cctcgtccac
     2581 ctgtcggagg tgctctggcc cgcgcccccc ggcccggcgc tggccgccgc ccgggccgat
     2641 ctgcgcgccc tgccggccgg ggccgaggcc atcagcgacg accccggcgt cgtctggcgg
     2701 gccggtcggc ggacgccgcc ggacctcgtc gacacctcca tcctgcgcat cgactcgcac
     2761 cggatcaccg ccgcctccct ggcccgggcg gccgccgacc gccgggtctg cgccgtcctc
     2821 gtctggtccc accgcttcgg cgacctcgcc gtcctgcccg acgggctgcg gcaggcgggc
     2881 tacgccccgg ccggcgccta cggcggcccg aagcaactct ggaggcgggg ctgcgccccc
     2941 tgacgtaggc tggccgcatg aggcgtccgg tggccctcgt ggcggtcctg ctgctgacgg
     3001 cgctcggcga gtacgtcgcc gccccgcccg ccgccgaggc catcgccgcc ggcgcctgca
     3061 gcatcagcgg caccatcgac ttcacgccgt cggcggccgg cgccgaccac ggcgcctggg
     3121 cgatcggccc ggccgtcatc gcctgccgtg gcccgttccg tgtcccccat cccgagcaga
     3181 tgaacggcgt gccggggtcg
//
LOCUS       DATGJT010000198         2473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1165780, whole genome shotgun sequence.
ACCESSION   DATGJT010000198 DATGJT010000000
VERSION     DATGJT010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165780"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2307
                     /gene="dnaE"
                     /locus_tag="VKX24_03405"
     CDS             <1..2307
                     /gene="dnaE"
                     /locus_tag="VKX24_03405"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HLJ07555.1"
                     /translation="GRKQMPDIDMDFDERYRGEMIRYAAERYGADHVAQIVTFSTIKA
                     RAAVRDAARVLGYPYAVGDKIAKLMPPLIMGRDTPLHACFERKDKFEDGYKMAGELRD
                     LYEADPDVKRVCDVALGLEGLRRQDGIHAAAVVITRDPLTEYLPIQRKPEPGGRLEDA
                     PIVTQYEMHGVEDLGLLKMDFLGLRNLSVIDRTLELIKASTGIDLDIDNVPLDDEKTF
                     EMLREGRSIGVFQLEGGPMRSLMRSLAPTTFEDIAALVALYRPGPMGANMHTDYADRK
                     NGRKPVAYYHADLEEILAPTYGLMIYQEQMMQVAQRMAGYSLAEADNLRKATGKKKRE
                     LIAKERSKFVAGCEAAGYGAAFGEQMFDVIEPFADYSFNKSHSVGYGFVSYQTAYLKA
                     HHPVEYLAALLTSVKDDKDKTAVYLNECRVLGIPVLVPDVNVAESDFVGKAGSIPFGM
                     SAVRNVGAGIVAHIVAEREENGPFTSFADFCNRVNPSVLNKRALESLIKAGAFDSLGH
                     PRKGLLMVFERIADSALARRREAEAGIMSLFGEATVGGGPAEIDRVDVPDVEFDKMQR
                     LAYEKEMLGLYVSDHPLMGAQAALARHVESTLTEAKEMNDGAPTTLGGVVTALNRRYT
                     KRGDLMATFVLEDLEAAMEVFVFPRTMADYGHLLEEDAVVCAKGRIDRRDDQAKFIAM
                     EIRRPELVVGEGPPVRLKVPASRLTETLVTEVKRILEGHPGDSAVMLHVEDGRRETVL
                     RLGPAYCVDGGNALHAELRVLLGADAVF"
BASE COUNT          406 a          882 c          851 g          334 t
ORIGIN      
        1 ggccgcaagc agatgcccga catcgacatg gacttcgacg agcgctaccg gggcgagatg
       61 atccgctacg ccgccgagcg ctacggcgcc gaccacgtgg cccagatcgt cacgttctcg
      121 accatcaagg cccgggccgc ggtgcgcgac gcggcgaggg tcctcggcta cccctacgcc
      181 gtcggcgaca agatcgccaa gctcatgccc ccgctgatca tgggccgcga cacgccgctg
      241 cacgcctgct tcgagcggaa ggacaagttc gaggacggct acaagatggc cggcgagctg
      301 cgcgacctct acgaggccga ccccgacgtg aagcgggtct gcgacgtggc gctgggcctc
      361 gagggcctcc gccggcagga cggcatccac gccgccgccg tcgtcatcac ccgcgacccg
      421 ctgaccgagt acctgccgat ccagcgcaag cccgagcccg gcggccgcct cgaggacgcc
      481 ccgatcgtca cgcagtacga gatgcacggc gtggaggacc tcggcctcct caagatggac
      541 ttcctgggcc tgcggaacct gtcggtcatc gaccggacgc tggagctcat caaggcctcg
      601 accgggatcg acctcgacat cgacaacgtc cccctcgacg acgagaagac gttcgagatg
      661 ctgcgggagg gccgctcgat cggcgtgttc cagctcgagg gcgggccgat gcgctcgctc
      721 atgcggtcgc tggcgccgac caccttcgag gacatcgcgg cgctggtggc gctctaccgg
      781 cccgggccga tgggcgccaa catgcacacc gactacgccg accgcaagaa cggccgcaag
      841 cccgtcgcct actaccacgc cgacctggag gagatcctcg ccccgaccta cgggctgatg
      901 atctaccagg agcagatgat gcaggtggcc cagcggatgg ccggctactc gctggccgag
      961 gccgacaacc tccgcaaggc caccggcaag aagaagcggg agctgatcgc caaggagcgc
     1021 tccaagttcg tggccggctg cgaggcggcg ggctacggcg cggccttcgg cgagcagatg
     1081 ttcgacgtca tcgagccctt cgccgactac tcgttcaaca agtcgcactc cgtcgggtac
     1141 ggcttcgtct cctaccagac ggcctacctc aaggcccacc acccggtcga gtacctcgcc
     1201 gcgctgctga cgtcggtcaa ggacgacaag gacaagacgg ccgtctacct caacgagtgc
     1261 cgggtgctcg gcatcccggt gctggtgccc gacgtcaacg tggccgagag cgacttcgtc
     1321 gggaaggccg gctcgatccc cttcgggatg tcggccgtgc gcaacgtcgg ggcggggatc
     1381 gtggcccaca tcgtcgccga gcgggaggag aacggcccgt tcacctcctt cgccgacttc
     1441 tgcaaccggg tgaacccgtc ggtgctcaac aagcgggcgc tggagtcgct gatcaaggcc
     1501 ggggccttcg actcgctcgg gcatccccgc aagggcctgc tgatggtctt cgagcggatc
     1561 gccgattcgg cgctggcccg gcggcgggag gccgaggcgg ggatcatgag cctcttcggg
     1621 gaggcgaccg tgggcggggg cccggccgag atcgaccgcg tcgacgtgcc cgacgtggag
     1681 ttcgacaaga tgcagcgcct agcctacgag aaggagatgc tgggcctcta cgtctccgac
     1741 cacccgctga tgggggcgca ggcggcgctg gcccgccacg tcgagtcgac gctcaccgag
     1801 gccaaggaga tgaacgacgg cgccccgacg acgttggggg gcgtggtcac cgcgctcaac
     1861 cgccgctaca ccaagcgggg cgacctcatg gccaccttcg tgctcgagga cctcgaggcg
     1921 gccatggagg tgttcgtctt cccccgcacg atggccgact acggccacct cctggaggag
     1981 gacgccgtcg tctgcgccaa gggccgcatc gaccgccgcg acgaccaggc gaagttcatc
     2041 gccatggaga tccggcgccc cgagctggtc gtcggggagg gcccgcccgt ccggctgaag
     2101 gtgccggcct cccgcctgac cgagacgctc gtgacggagg tcaagcggat cctcgagggc
     2161 cacccgggcg actcggcggt gatgctccac gtggaggacg gacggcgcga gacggtgctg
     2221 cgcctcggcc cggcctactg cgtcgacggc ggcaacgccc tccacgccga gctgcgggtg
     2281 ctcctcggcg ccgacgccgt cttctgagct ccgctcagga gaccagcgcc acccggggcc
     2341 gggcgctcca gcggacctcg accgccgaca ccggcgccgg tatccccttg agctgcatgt
     2401 cgccgatcga ctcgcaggcg aacccgcccc ggccgtgggc cagcgacggg acgacggccg
     2461 cggcgaggat ctg
//
LOCUS       DATGJT010000199         3912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_338810, whole genome shotgun sequence.
ACCESSION   DATGJT010000199 DATGJT010000000
VERSION     DATGJT010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3912
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338810"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..1488
                     /locus_tag="VKX24_03410"
     CDS             22..1488
                     /locus_tag="VKX24_03410"
                     /inference="COORDINATES: protein motif:HMM:NF014207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HLJ07556.1"
                     /translation="MMSPLTVSSQSPAPAAPPDSGSSADDGQGPAQGGVKFDALLALL
                     GGIGPASASAPGQWSPPGAASRSSGPDKDADARPGGDDAPPGSLETLVVALAQQLCGA
                     SPIVTPPAPPAGAEAAGQAVPSLPAVTPAVTAAVPPLAPAAVAPRPAGWPPAGPDPSA
                     GPDPSAVPDPSTAADPSATRPVPPPKPSPGAAGPEGHRSPVAALARSGDGSGPGSPVA
                     ALAHTGQGPGGAGSDSESPVAALAHSGDAGPTPAAAPAPKGRDRRAPAAEPAGDGDVG
                     LPDPTVAAAMADAGAGSRPDDPAPETARRPSGAADGVELHVSVPVPAGADPAASAAPA
                     EAATPASGPAPATPAAVADQIVSAVVPLHGRGDGRHEVTLELRPESLGAIRVELSVEH
                     QTVHLTLHAVEPATAALLDRALPDLRSALADAGLHAGQVGVGAGDGGTGQRRNADDGP
                     PSRAGHRARRTPVTAASSVAAASPPATAHAAGRLDVLL"
     gene            1514..1996
                     /locus_tag="VKX24_03415"
     CDS             1514..1996
                     /locus_tag="VKX24_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015801169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /protein_id="HLJ07557.1"
                     /translation="MNIVSAYGAAPPALVSGPTDGATTQLQTPQLGQDDFLKLLVAQL
                     RYQNPMQPVDSSQFMAQTAQFSMVEKMTDMATQTDALVAGEAAQRAAGLLGRQVTWTG
                     ADGSPQSGVVTGTALGSAGPTLILADNSTIGLSDVTRVDLAPATPAPAAPTAPTTPTA
                     "
     gene            2022..3287
                     /locus_tag="VKX24_03420"
     CDS             2022..3287
                     /locus_tag="VKX24_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019136074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HLJ07558.1"
                     /translation="MLRSMFSAVSGLRSHQTMMDVIGNDIANVNTVGYKSSSVIFEDL
                     LSQTIRGAGVAAGGASGSGGTNPAQVGLGVSVAGISQNFTQGASQLTGRSTDLSIQGD
                     GLFVVRKGPEQLYTRDGSLNFDALGRLTTADGAVLQGWTADANGVVNPNAAVGDISMP
                     LGQTTAPTETANIKLGGNLPADAAVGTSIVTSLTAYDSQGTAIDTSFTYTKTAGDTWT
                     VTATMPDTGGGPDVTVGTATLNWDSAATPPAFNPPPSLTLTPTAATGAWNGTIAVDFG
                     ATTDSQALRQFSGDSSVAALSQDGSGLGTLQSFTIGQDGIVTGVFSNGRTRAIAQIAL
                     AGFSNASGLEKTGDSLYRASVNSGLPQIGQAGSGGRGTLSGSTLEMSNVDLAQEFTNL
                     IVAQRGFQANARVITASDELLQDLVNLKR"
     gene            3382..3660
                     /locus_tag="VKX24_03425"
     CDS             3382..3660
                     /locus_tag="VKX24_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012947171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FlbD family protein"
                     /protein_id="HLJ07559.1"
                     /translation="MIILTRLNGEPFALNCDLVERVDAHPDTVLTLVDATKYIVAESL
                     TEVVERVRDFRAGVLVRAAELQQPAPGLVSATPGPGAALRLVNDPDEG"
     gene            3662..>3912
                     /locus_tag="VKX24_03430"
     CDS             3662..>3912
                     /locus_tag="VKX24_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011719687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility-associated protein"
                     /protein_id="HLJ07560.1"
                     /translation="MDPGTLIGIGLAFGAVFGSMIMEGGNPAAILLPPAMVLVFLGTF
                     GVAMACGLLKDATGALAALKTALLGKKHSADETVATLVS"
BASE COUNT          530 a         1597 c         1303 g          482 t
ORIGIN      
        1 ctcgtactcg ggagcccccc aatgatgtcg cccctcactg tgtcctccca gtcgccggcg
       61 cccgcggcgc cgcccgactc cggttcctcc gccgacgacg gtcagggacc ggcgcagggc
      121 ggcgtgaagt tcgacgccct ccttgcgctg ctcggcggaa tcggcccggc gtcggcgtca
      181 gctccggggc agtggtcgcc gccgggtgcg gcgagccgct cctccggtcc cgacaaggac
      241 gccgacgccc ggccgggggg cgacgacgcc cctccgggct cgctcgagac cctggtcgtc
      301 gccctggccc agcagctctg cggagcgtcg ccgatcgtga cgcctccggc cccccccgcc
      361 ggcgccgagg cggccggaca agcggttccg tcgctcccgg ctgtcacgcc ggcggtcacg
      421 gcagcagtcc cgccgctcgc cccggcggcc gtcgcacccc gtccggccgg ctggccgccc
      481 gccggccccg atccctccgc cggccccgat ccctccgccg tccccgatcc gtctacggcc
      541 gccgatccct cggcgacccg gccggttcca ccgccgaagc cgtcgccggg cgccgcaggc
      601 cccgagggtc accgctcgcc ggtggcggct ctggcccgga gcggtgacgg gtcgggtccc
      661 ggatcgccgg tggcggccct ggcccacact ggtcaagggc cgggtggtgc cgggtcggat
      721 tcggagtccc ccgtggcggc gttggcccac agcggcgatg cgggtcccac accggcggcc
      781 gcgccggcgc cgaagggccg cgaccgccgg gcgccggcgg ccgaaccggc cggtgacggc
      841 gacgtcggcc ttccggatcc caccgtggcg gccgcgatgg cggacgccgg cgccggctcc
      901 cgacccgacg accccgcacc ggagacggcc cgccgcccgt ccggcgccgc cgacggcgtc
      961 gaactgcacg tttccgttcc cgtccctgcc ggggccgacc cggcggcgtc cgccgcgccg
     1021 gccgaagcgg ccaccccggc ctccggtccg gcgccggcga ccccggcggc ggtggcggac
     1081 cagatcgtgt cggctgtcgt cccgttgcac gggcggggcg acggccggca cgaagtcacg
     1141 ctggagctcc ggccggagag cctcggcgcc atccgcgtcg agctctccgt cgagcaccag
     1201 acggttcacc tgaccctcca cgccgtcgag cccgccaccg ccgcactgct cgaccgggcc
     1261 ctacccgacc tccgttcggc gctggccgac gccggcctcc acgccggcca ggtcggggtc
     1321 ggcgccggcg acggcggcac cgggcagcgg cgcaacgccg acgacggccc cccgtcccgc
     1381 gccgggcatc gcgcccggcg gacccccgtc acggccgcgt cctccgtggc cgccgcgtcc
     1441 ccgccggcca cggcgcacgc cgccggccgg ctcgacgtcc tcctgtgacc cgtccggaac
     1501 gaaaggaagc ccggtgaaca tcgtcagcgc ctacggcgcc gccccgccgg ccctcgtcag
     1561 cgggccgacc gacggcgcca ccacccagtt gcagacgccg cagctcggcc aggacgactt
     1621 cctcaagctg ctggtggccc aactccggta ccagaacccg atgcagcccg tcgacagctc
     1681 gcagttcatg gcccagacgg cgcagttctc gatggtcgag aagatgaccg acatggccac
     1741 ccagaccgat gccctcgtcg ccggggaagc ggcgcagcgg gcggcgggcc tcctcggccg
     1801 tcaggtcacc tggaccggcg ccgacggcag cccgcagtcc ggcgtcgtca ccgggaccgc
     1861 gctcggcagc gccggcccga ccctcatcct cgccgacaac agcaccatcg gcctgagcga
     1921 cgtcacccgg gtcgacctcg ccccggcaac gccggccccg gcggctccga ccgccccgac
     1981 caccccgacc gcctgatctc ccaagcagaa agaaggaacg catgctccgt tcgatgttct
     2041 cggcggtttc cggcctccgg agccaccaga cgatgatgga cgtcatcggc aacgacatcg
     2101 ccaacgtcaa caccgtcggc tacaagtcct ccagcgtgat cttcgaggac ctgctcagcc
     2161 agacgatccg gggcgccggt gtcgccgccg gcggtgccag cggttcgggg ggcacgaacc
     2221 cggcccaggt cggcctcggc gtcagcgtgg ccggaatctc ccagaacttc acccagggcg
     2281 cctcccagct gacgggtcgg tccaccgacc tgtcgatcca gggggacggg ctgttcgtgg
     2341 tccgtaaggg cccggagcag ctctacaccc gggacggctc cctgaacttc gacgccctcg
     2401 gccggctgac caccgccgac ggcgccgtcc tccagggatg gacggccgac gccaacggcg
     2461 tcgtcaatcc caacgccgcg gtcggggaca tctcgatgcc cctcggccag accaccgccc
     2521 cgacggagac ggccaacatc aagctcggcg ggaacctgcc tgccgacgcc gcggtcggca
     2581 cgtcgatcgt cacgtcgctc accgcctacg acagccaggg aacggccatc gacacgtcgt
     2641 tcacctacac caagaccgcc ggcgacacct ggacggtcac ggccaccatg cccgacaccg
     2701 gcggcgggcc cgacgtcacc gtcggcaccg ccacgctgaa ctgggactcc gccgccaccc
     2761 cgccggcctt caaccccccg ccgtcgctga cgctcacgcc gacggcggcc accggcgcct
     2821 ggaacggcac catcgccgtg gacttcggcg ccaccaccga ctcccaggcc ctgcgccagt
     2881 tctcgggcga ctccagcgtg gccgcgctgt cccaggacgg ctcgggtctc ggaacgctgc
     2941 agtccttcac catcggccag gacggcatcg tcaccggcgt gttctccaac ggccggacgc
     3001 gggcgatcgc ccagatcgcc ctggccgggt tctccaacgc ctcagggctg gagaagaccg
     3061 gcgactcgct ctaccgggcc agcgtcaact ccgggctccc ccagatcggc caggccggct
     3121 ccggcgggcg ggggacgctg tcgggttcca cgctggagat gagcaacgtc gacctcgccc
     3181 aggagttcac caacctgatc gtcgcccagc ggggcttcca ggccaacgcc cgggtgatca
     3241 ccgcatcgga cgaactgctg caggatctcg tcaacctcaa gcggtaagcc cgcccggccc
     3301 ctcaggtcgg cccccggcgg gccgatctga ggggcgtcag ggcgccatgg accggcaacc
     3361 ggaccctcca aggacggaga gatgatcatt ctcacccgat tgaacggcga gcctttcgcc
     3421 ctcaactgcg atctggtcga acgcgtcgac gcgcaccccg acacggtgct gacgctggtc
     3481 gacgccacga agtacatcgt ggccgagagc ctgaccgagg tggtcgagcg cgtccgcgac
     3541 ttccgcgccg gcgtcctcgt ccgggccgcc gagctccagc agccggcgcc gggactcgtg
     3601 tcggcgacgc ccgggcccgg agcggcgctg cgtctcgtga acgacccgga cgagggctga
     3661 catggacccc ggaaccctga tcgggatcgg cctggccttc ggcgccgtct tcggctccat
     3721 gatcatggag ggcggcaacc cggccgccat cctgctcccg cccgccatgg tcctcgtctt
     3781 cctcggaacc ttcggcgtgg ccatggcctg tggcctgctg aaggacgcca ccggcgccct
     3841 cgccgctctc aagaccgccc tgctgggcaa gaagcactcc gccgacgaga cggtggcgac
     3901 gctggtgtcc tt
//
LOCUS       DATGJT010000200         2357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_752617, whole genome shotgun sequence.
ACCESSION   DATGJT010000200 DATGJT010000000
VERSION     DATGJT010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752617"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..837)
                     /locus_tag="VKX24_03435"
     CDS             complement(<1..837)
                     /locus_tag="VKX24_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009774572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl domain-containing protein"
                     /protein_id="HLJ07561.1"
                     /translation="MDITMPQLGETVTEGTVTRWLKQVGDQVAPDELIFEVSTDKVDS
                     EVPAPGGGYLVEILVPEGETVPVGTRLAVLGDAPPSAGGGGGGGGAQAQASSAAPAEA
                     SSAAPAEPEAAPAAAAAPAQGEAGTVEAVETVDAEPVPEAARAGGGATGGSEADEPAG
                     ARAEAGAAAAEAAAKGIPTGAEAAGGAGTEAAGGAGARAGAASGAEAGGGAEAGGGAK
                     AGGGAGAGAAGGAGGAGAGAAPAGPAEETPAPGPESENGHGAGAGMLLSPVVRRLVAE
                     HGL"
     gene            complement(862..2253)
                     /gene="lpdA"
                     /locus_tag="VKX24_03440"
     CDS             complement(862..2253)
                     /gene="lpdA"
                     /locus_tag="VKX24_03440"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HLJ07562.1"
                     /translation="MAQEFDVVILGGGPGGYAAALYGAAAGLSIGMIEEARVGGTCLH
                     RGCIPAKELLQTAEVVRTVAGAKEFGVEAGQPVLDLSVSQQRKQQVIDRLTKGLESVL
                     KSRKVVTFNGRGTVVDAAARRLRVDDGTEITGTKALILATGSSPRSLPGFDFDGERIM
                     SSDHVLNLDHVPARVCVIGGGAIGCEFASFLGDVGSDVTVLEALPQILTGVDKDAADV
                     VVRAFKKRGIKVQTGVRVNGADRNGDGVVVRYDPGGGETELAVDLVVVSVGRRPRSDG
                     VGLEGSGVDVDQRGFVTVDGLMRTSVPGVYAVGDLVATPQLAHVGFAEAIITIKAILG
                     EPVVPMDYAKVPWGIYCHPEVAFCGLTEAQAKEQGYDIHTSTHRFMGNGRALIIGESD
                     GIVKVVAEKGGPILGVHIAGPWATELLAEGYLAVNWEALPEEVAAFVHPHPTLSEVFG
                     ETALSLTGRSLHG"
BASE COUNT          280 a          973 c          787 g          317 t
ORIGIN      
        1 gagcccgtgc tccgccacga gccggcggac gacgggcgag agcagcatcc ccgctccggc
       61 cccgtgcccg ttctcactct ccggcccggg cgccggcgtc tcctccgccg gcccggccgg
      121 cgctgcgccc gcgccggcgc ccccggcccc gccggccgct ccggctccgg caccgccgcc
      181 cgccttggct ccgccgcccg cctcggcacc gccgcccgcc tcggctccgc tggccgctcc
      241 cgcccgggcg ccggcaccgc cggccgcctc ggtccccgcg cccccggcgg cctcggcgcc
      301 ggtcggaatg cccttcgcgg ccgcctcggc cgccgccgca ccggcttccg cccgggcgcc
      361 ggccggctcg tcggcctccg atccaccggt ggccccgccg ccggcccgag ccgcctcggg
      421 caccggttcg gcgtcaaccg tctcgacggc ctccaccgtg ccggcctcgc cctgcgccgg
      481 agccgcggcc gcggccggcg ccgcctcggg ctccgccggc gcggcgctcg acgcctcggc
      541 cggcgcggcg ctcgacgcct gggcctgcgc accgccgcca ccgccgcccc ctccggcgga
      601 cggcggcgcg tcgcccagca ccgccagccg ggtcccgacg gggacggtct cgccttccgg
      661 caccaggatc tccaccaggt agccgccgcc cggcgccggc acctcggagt ccaccttgtc
      721 ggtggacact tcgaagatca gctcgtccgg cgccacctgg tcgccgacct gcttcagcca
      781 ccgggtgacc gtcccctcgg tgaccgtctc acccagctgc ggcatggtga tgtccactgc
      841 ggcactcctt gcttggaagc gtcagccgtg caggctgcga ccggtgagcg acagcgccgt
      901 ctcgccgaag acctccgaca gcgtcgggtg gggatgcacg aaggcggcga cctcctcggg
      961 cagcgcctcc cagttgaccg ccaggtagcc ctcggccagc agctcggtgg cccacggccc
     1021 ggcgatgtgg acgccgagga tcgggccgcc cttctccgcc accaccttca cgatcccgtc
     1081 cgactcgccg atgatcagcg cccgaccgtt gcccatgaag cggtgggtcg acgtgtggat
     1141 gtcgtagccc tgctccttgg cctgcgcctc ggtcagcccg cagaaggcga cctcggggtg
     1201 gcagtagatc ccccacggca ccttggcgta gtccatcggc acgaccggct cgccgaggat
     1261 cgccttgatc gtgatgatgg cctcggcgaa gccgacgtgg gccagctgcg gcgtggccac
     1321 gaggtcgccg acggcgtaga cgcccggcac cgacgtccgc atgaggccgt cgacggtgac
     1381 gaacccccgc tggtcgacgt cgacccccga gccctcgagg ccgacgccat ccgaccgggg
     1441 ccggcggccc acgctcacca cgacgaggtc gaccgccagc tcggtctcgc cgcctccggg
     1501 gtcgtagcgg acgacgaccc cgtcaccgtt gcggtcggcg ccgttcaccc gcacgccggt
     1561 ctggaccttg atcccccgct tcttgaacgc ccgcacgacg acgtcggcgg cgtccttgtc
     1621 gacgccggtc aggatctggg gcagcgcctc gaggacggtc acgtcgctcc cgacatcgcc
     1681 caggaacgag gcgaactcgc agccgatggc gccaccgccg atcacacaca cccgggccgg
     1741 cacgtggtcg aggttgagca cgtggtccga gctcatgatg cgttcgccgt cgaagtcgaa
     1801 gcccggcagc gagcggggcg acgaccccgt ggcgaggatc agcgccttgg tgccggtgat
     1861 ctccgtgccg tcgtcgaccc gcagcctgcg ggcggcggcg tcgaccaccg tcccccgtcc
     1921 gttgaacgtc accaccttgc ggctcttcag caccgactcc agacccttgg tcagccggtc
     1981 gatgacctgc tgcttgcgct gctgcgagac cgacaggtcg aggacgggct gccccgcctc
     2041 caccccgaac tccttggccc cggccacggt gcgcacgact tcggcggtct ggagcagctc
     2101 cttggccggg atgcagcccc ggtgcaggca ggtgccgccg acccgggcct cttcgatcat
     2161 gccgatggac aggccggcag cggcgccgta gagcgccgcg gcatagcccc ccggcccacc
     2221 gccgaggatg acgacgtcga attcctgggc cacgagtcct ccccgggcag taccgtcggt
     2281 tgcggagtct agggcggggt gtcagcccac cccgcctcga cgtttcgaac gccagttcgc
     2341 acctggagat tcccgct
//
LOCUS       DATGJT010000201         4236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_131376, whole genome shotgun sequence.
ACCESSION   DATGJT010000201 DATGJT010000000
VERSION     DATGJT010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4236
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131376"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..950)
                     /locus_tag="VKX24_03445"
     CDS             complement(6..950)
                     /locus_tag="VKX24_03445"
                     /inference="COORDINATES: protein motif:HMM:NF039823.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5667 domain-containing protein"
                     /protein_id="HLJ07563.1"
                     /translation="MDDPFRPGGAAPAEEVTDRLLDALAAGDLAAVQRLEAARPDLAL
                     SPAAAAAGAARRALAVRSDPAVRAQQVRALMDEAVRLRNAPGPASQPVPGPASQPAPR
                     TASQPGPRAAPVPVPGAAPGPGAARQARRRQRWSWPRRVAVTLAAVIGVGAAGLTATA
                     ALAANAQPGQALYGTKLALENVEVDVQLNPTKKVSLRVRFAEERLDELSALLAQGRAG
                     QATRAAANLATQERQIIASLIKLAAQGKAPPSLVRTLELDLARHAAKLSAERAASACG
                     RRPLAPACRQLTTAQRTTARAILRLSQLPGGVPPRGSL"
     gene            complement(1030..1617)
                     /locus_tag="VKX24_03450"
     CDS             complement(1030..1617)
                     /locus_tag="VKX24_03450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07564.1"
                     /translation="MRRDPQAWAEIYERFADGLLGFFVHQLHDRAAAEDLTSEVFLEA
                     LRAADRFDLREGREGRGGDLTDLRAWLFRIARNNLIDYFRRQRRSPTQSIEVAAEADL
                     ARAIPSIDPGEAAIAALDQRRVLDAIAALSADQREVILLRLTGGLTSPQIAEIVGKTT
                     GAVKALQHRALATLTRALNPDPAAGEVGPGMEDRP"
     gene            1753..3015
                     /locus_tag="VKX24_03455"
     CDS             1753..3015
                     /locus_tag="VKX24_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07565.1"
                     /translation="MEVGKSRGAATIATQNDSARPPAAGGDERPGPGPDAGADSGARI
                     GSRIDQLLKIALQEQEREQAGFMKVLQASRDALNATRMELDHLRALVEGRDEAVLAQV
                     DLRLERVARQEAMEELAANSSSAAKELAVLRKVLSTKLDSVVASLDAVDARTGEALAG
                     LSERVDTLEQSVGDTVLAVSGELAASARRDEAMASALEERLATLERTLEARQQEVADA
                     ILKALDPVGRIMQLVQGRLARAASDLAVAQGSLLNRLLERDDRLERDRDRVLAELLNE
                     FANGLKGRDRSRIGAQLLDADEERRRRRDLGRARPAAPPPIEYSPRPEGTRLPPPVGT
                     GGAAPDFNPDPLSDAPWGASFGRGDDLVEADDDDPHRQVERYAGGTRVTDEWTAPNGA
                     YGPGAGPGPVPGAGGGGKPSRRNRRPVL"
     gene            3049..>4236
                     /locus_tag="VKX24_03460"
     CDS             3049..>4236
                     /locus_tag="VKX24_03460"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLJ07566.1"
                     /translation="MSESDADSIAWPLVLAVVVTHNGRRWLPGCLKSLAMQTYPALEV
                     VVVDAASEDPEAVRKLIGRLLPTASMLRLERNVGFGGAANRALELSPDARSAEFYLFL
                     HDDVALDRDCVGLLVAAALETGAGVVGGKGLSWDEPEVLLEVGMSADEFGYPVSGLEE
                     REIDQGQHDTRREVLFVTSACILVSRPTVERCGSWDVGYVLFGEDLDLCVRARLCGFP
                     VIVTPAAVFYHAVAMATGRREGTPKDPVRYFTRRNRLRTIAKNASATRVLLLIALYTG
                     LLSAEAVLLAALRRFDEIPPYFKAYGWFVRTLPDVARRRRAVQRRRTVSDRRVRRYQV
                     RELPRARIFLERRLMQWGAETMRFGQKTFSMFTPSALASRVGRWARSPAVLATVLIVL
                     ATAV"
BASE COUNT          540 a         1561 c         1577 g          558 t
ORIGIN      
        1 ttttcttaca aagaaccgcg tggggggacc ccgccgggga gctggctcag gcgcaggatc
       61 gcccgggccg tcgtgcgctg ggcggtggtc agctggcggc aggccggggc cagcggccgg
      121 cgcccgcacg ccgaggccgc ccgctcggcc gacagcttgg cggcgtggcg ggccaggtcg
      181 agctcgaggg tccgcaccag cgagggcggg gccttcccct gggccgccag cttgatcagc
      241 gacgcgatga tctgccgctc ctgggtggcg aggttggccg ccgccctggt ggcctgcccg
      301 gcccggccct gggccagcag cgccgacagc tcgtccagcc gctcctcggc gaaccggacc
      361 cgcagcgaca ccttcttcgt cgggttgagc tggacgtcga cctcgacgtt ctcgagggcc
      421 agcttcgtcc cgtagagcgc ctggccgggc tgggcgttgg ccgccagggc ggcggttgcg
      481 gtcagcccgg ccgccccgac gccgatgacc gccgccagcg ttacggcgac ccgccgcggc
      541 cagctccaac gctggcggcg cctggcctgc cgcgccgccc caggcccggg agccgccccg
      601 ggaaccggca cgggcgccgc cctcggcccc ggctgggaag ccgtccgggg cgccggctgg
      661 gaagccggcc cgggcaccgg ctgggaagcc ggcccgggcg cgttccgcag ccgtacggct
      721 tcgtccatca gagcgcggac ctgctgcgcc cggactgccg ggtcggaccg gaccgccagc
      781 gcccgccggg ccgctccggc ggcggccgcg gccggactca gagcgaggtc cgggcgggcg
      841 gcctccagcc gctggaccgc ggcgaggtcg ccggcggcga gcgcgtcgag cagccggtcg
      901 gtgacctcct cggcaggggc cgccccccca gggcggaacg ggtcgtccat cgtcagccgt
      961 ccatcgtcaa attcgtccgt cgacctattc gacagagggg aagcgttcgg gggcgagcaa
     1021 acgatacggt cacgggcggt cctccatgcc ggggcccacc tcgcccgcag ccgggtccgg
     1081 gttgagtgcc cgggtcagcg tcgccagggc gcggtgctgc agcgctttca ccgccccggt
     1141 cgtcttgccg acgatctcgg cgatctgcgg ggaggtcaac ccgccggtca gccgcagcag
     1201 gatcacctcc cgctggtcgg ccgagagggc ggcgatggcg tcgagcaccc ggcgctggtc
     1261 cagggcggcg atcgccgcct ccccggggtc gatcgacggg atcgcccggg ccaggtcggc
     1321 ctcggcggcg acctcgatcg actgcgtcgg gctgcggcgc tgccggcgga aatagtcgat
     1381 gaggttgttg cgggcgatcc ggaacagcca ggcccggagg tcggtcaggt cgcccccccg
     1441 gccctcccgg ccctcccgga gatcgaaccg gtcggccgcc ctgagcgcct ccaggaacac
     1501 ctccgaggtg aggtcctcgg ccgccgcccg gtcgtgaagt tggtggacga agaagcccag
     1561 cagaccgtcg gcgaagcgtt cgtagatctc ggcccaggcc tgcgggtccc ggcgcaccgc
     1621 tgcggcgatc agcgcacgat cgtcgtgatt cggtggattg gtcgggcctt cggcggggcc
     1681 gccagggggt cgtcgtctca caaaataggt gtctcgggag cctcgacctg cgacaataga
     1741 gcgtgccagt ttgtggaagt agggaagagc cgaggggcgg cgaccatcgc gacccagaac
     1801 gatagcgccc gcccccccgc cgccggaggc gacgagaggc cgggccccgg acccgacgcc
     1861 ggcgccgaca gcggggcgcg catcgggtcg cgcatcgacc agctcctgaa gatcgcgctc
     1921 caggaacagg agcgcgagca ggccggcttc atgaaggtgc tccaggcctc ccgcgacgcg
     1981 ctgaacgcca cccggatgga gctcgaccat ctccgggccc tggttgaggg ccgggacgaa
     2041 gcggtcctgg cccaggtcga cctccggctg gagcgggtcg cccgccagga ggcgatggag
     2101 gagctggccg ccaactcctc ctcggcggcc aaggagctgg ccgtcctccg gaaggtgttg
     2161 agcaccaagc tggactccgt cgtggcctcg ctcgacgccg tcgacgcccg caccggcgag
     2221 gcgctggccg ggctgtcgga acgggtcgac acgctggagc agagcgtggg ggacacggtg
     2281 ttggccgtca gcggcgagct ggccgcctca gcccgccgcg acgaggcgat ggccagcgcc
     2341 ctggaggagc gcctcgccac cctcgagcgg accctcgagg cccgccagca ggaggtcgcc
     2401 gacgccatcc tgaaggcgct cgacccggtc gggcgcatca tgcagctggt ccagggccgc
     2461 ctggcccggg cggcgtcgga tctggcggtc gcgcaggggt cgctgctcaa ccggctgctg
     2521 gagcgggacg accggctcga acgggaccgg gaccgggtgc tcgccgagct gctcaacgag
     2581 ttcgccaacg gcctgaaggg ccgggaccgg agccggatcg gcgcccagct gctggacgcc
     2641 gacgaggagc gccggcgccg gcgggacctc gggcgggcgc ggccggcagc gcccccgccg
     2701 atcgagtact cgccgaggcc agagggcacc cgcctgccgc ccccagtggg caccggcggg
     2761 gcggcgcccg acttcaaccc cgatccgctc tccgacgccc cctggggggc atcgttcggc
     2821 cggggggacg acctggtgga ggccgacgac gacgacccgc accgccaggt cgagcgctac
     2881 gccgggggca cccgggtgac cgacgagtgg accgctccga acggcgccta cgggccgggg
     2941 gccggcccgg gtccggttcc gggggcaggc ggcggcggca agccgtcacg gcgcaaccgc
     3001 agaccggttc tataatccga cgatacctcc tccctccagc ctcacctcat gagcgagtcc
     3061 gacgcggact cgatcgcctg gcctctcgtc ctggccgtcg tcgtcaccca caatggccgt
     3121 cgctggctgc ccggatgcct gaaatcgctg gcgatgcaga cctatccggc cctcgaggtc
     3181 gtggtggtcg acgccgcctc cgaggacccc gaggcggtgc gcaagctgat cggccggctc
     3241 ctcccgaccg cctcgatgct gcgcctggag cgcaacgtcg gcttcggtgg cgcggccaac
     3301 cgggcactcg aactctcgcc tgacgcccgt tcggccgagt tctacctgtt cctgcacgac
     3361 gacgtcgccc tcgaccggga ctgcgtcggg ctcctggtgg ccgccgccct cgagaccggc
     3421 gccggggtcg tggggggcaa ggggctgtcc tgggacgagc cggaggtgct gctcgaggtc
     3481 ggcatgtccg ccgacgagtt cggctacccg gtgtccggcc tcgaggagcg cgagatcgat
     3541 cagggccagc acgacacccg ccgcgaggtg ctgttcgtca ccagcgcctg catcctggtc
     3601 agccggccga cggtcgagcg gtgcgggtcc tgggacgtcg gctacgtgct gttcggggag
     3661 gacctggacc tgtgcgtccg ggcgcggctg tgcgggttcc cggtcatcgt caccccggcc
     3721 gcggtcttct accacgcggt ggcgatggcg accggccgcc gggaggggac cccgaaggat
     3781 ccggtgcgct acttcacccg gcgcaaccgt cttcgcacga tcgccaagaa cgcctcggcc
     3841 acccgggtcc tgctgctgat cgccctctac accggcctgc tgtcggccga ggcggtgcta
     3901 ctcgccgccc tccgccgctt cgacgagatc cctccgtact tcaaggccta cgggtggttc
     3961 gtccgcaccc tccccgacgt cgcccgccgg cgccgggcgg tgcagcggcg ccgcacggtc
     4021 tccgaccgcc gcgtccgccg ctaccaggtc agagagttgc cccgcgcccg catcttcctg
     4081 gagcgccgcc tgatgcagtg gggggccgag acgatgcgct tcggccagaa gacgttctcg
     4141 atgttcacgc cctccgccct cgcctcccgg gttgggcgct gggcgcggtc gccggcggtg
     4201 ctggccaccg tgctgatcgt gctggcgacc gcggtg
//
LOCUS       DATGJT010000202         4729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_27128, whole genome shotgun sequence.
ACCESSION   DATGJT010000202 DATGJT010000000
VERSION     DATGJT010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27128"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VKX24_03465"
     CDS             complement(<1..198)
                     /locus_tag="VKX24_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004099125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ07567.1"
                     /translation="MTRERVVIVGGGFGGLACARALDGAAVDVLLLDARNYHLFTPLL
                     YQVATALLDPSDIAYPFRTVFR"
     gene            266..1099
                     /locus_tag="VKX24_03470"
     CDS             266..1099
                     /locus_tag="VKX24_03470"
                     /inference="COORDINATES: protein motif:HMM:NF044908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HLJ07568.1"
                     /translation="MVFAFDEDTALEPLAAAGAATGPAFTAGMSHRWDTVGPPNGGFL
                     LALAARGLARAAPFPDPVTLTGHFLRPAQHTPVELHVEALRTGKTHATAMGRLLQGGK
                     ELLRTLATFSDLALADGPTESGARPPALPPPEACLPVKDLRARQWDDLPGTLPELYRA
                     IDVRLARPERREEGEIARLEGWMRFTDGRQPDVAAVPLLADAFPPAVLDIAGAAWVPT
                     VELTVHVRGRPAPGWIVASFRTRFLCNGYFEEDGELWDSAGRLVALSRQLAVTRGARP
                     A"
     gene            complement(1130..1867)
                     /locus_tag="VKX24_03475"
     CDS             complement(1130..1867)
                     /locus_tag="VKX24_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07569.1"
                     /translation="MIEHAGRSYRALADEIGAVLQAAAETAEKMQVEAQAEAVRLRGE
                     AEAEVRAACEEGRRILDEARMEADMVRAEAEWQAQEIVAQARRQAADRLAGADTRLAE
                     MEKAQDRVLDRLAGVSQVLAEALATLRESPAGTAPAAAGFAADDADPDDADPDDADTP
                     TAKVYFVEFPPAAGAVPPAPLEAPIEVPVAATPAPGPAPAPAPEEIEIVLPEPAEASL
                     FRSEEERTDWAPPLDIPTWWTRGGAQG"
     gene            2165..2908
                     /locus_tag="VKX24_03480"
     CDS             2165..2908
                     /locus_tag="VKX24_03480"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HLJ07570.1"
                     /translation="MPVLAAERETVGVSYRPGKWAAPPAAAASRRGRGLLGGAVRAAA
                     VVLVVLLGWVGVHHLGDLIPGFGNPFATQKVDRTGPAVLKALDELHQYQAATGSYQVM
                     VDIEKDAKYIPSFLKGERTLFLAQGSVEAGVDFSGLGPGAVTVNPDHSVTISLPHATL
                     SKPVLDTDASHVVDRNRGLLDRLGSVFSDSPTGEQALYAAAEPKLRAAADASGLVARA
                     DQNTTQMLQKLVGSLGFDKVDVVFQDNPA"
     gene            complement(2918..3643)
                     /locus_tag="VKX24_03485"
     CDS             complement(2918..3643)
                     /locus_tag="VKX24_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07571.1"
                     /translation="MAVCAGYALRACFPTKRRIGLVLPAAGALLFALLARLIPDSAPV
                     ALAQVADGGLFGVVLPVGCLVIGDAVLGAEVRSGTLHFTWLSPVSFATVVAGRWLAGA
                     AVAVAALAVPFGAGAVLAGVPGAVGPLFLAAVAGSAAYVAVFVLIGALSRRAVVWSLA
                     FVVLGERLLGTALSGVAQWSPGWEARAVYARLGPDAAGTLHRAGLPEGGPAVVRLVII
                     TAVALVIAALRLGRLRLSGPSGD"
     gene            complement(3924..>4729)
                     /locus_tag="VKX24_03490"
     CDS             complement(3924..>4729)
                     /locus_tag="VKX24_03490"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07572.1"
                     /translation="GPNGAGKTTLMRAVTGLLSVSAGRVWVAGGDPRHDRSVQGHIGL
                     VPEDEAVPGGLTPRQLARYRAALHSVPDREAPDRWLGVVGLLDVADRAMDGFSKGMRQ
                     RAKVAAALVSNPTVLILDEPLNGADPVQRANLIRLFRQLGDQGRTVVVSSHVLYEVER
                     LAERVMVLVAGRLAAAGDRRGIRDAMADRPRRVLVRADPPRVLAAALAGHDAVGGLEV
                     DGDRLTVATRRAGDLALALPGLARQASVRLWEVRPLDESLEALFRDLVR"
BASE COUNT          625 a         1820 c         1744 g          540 t
ORIGIN      
        1 ccggaagacc gtccggaacg ggtaggcaat gtcggacggg tcgagcagcg ccgtggccac
       61 ctggtacagc agcggggtga acaggtggta gttgcgggcg tcgaggagca ggacgtcgac
      121 cgcggcgccg tcgagcgccc gggcgcaggc caggccgccg aagccgccgc cgacgatgac
      181 cacccgctcc cgcgtcatcg gcgccatcgt ggcagaggaa ccagggtggg ggagcaaacg
      241 gcgcccggcg gtagggtccg ggcggatggt gttcgccttc gacgaggaca cggccctcga
      301 accgctggcg gccgccgggg cggccaccgg gcccgcgttc accgccggca tgagccaccg
      361 ctgggacacc gtcggcccgc ccaacggcgg cttcctcctc gctctggccg cccggggcct
      421 ggcccgggcc gctccgttcc ccgaccccgt cacgctcacg gggcacttcc tccggcccgc
      481 ccagcacacg ccggtggagc tccacgtcga ggcgctccgc accgggaaga cccacgcgac
      541 cgccatgggg cgcctcctcc agggcgggaa ggagctgctc cgcacgctgg ccacgttctc
      601 cgatctggct ctggcggacg gcccgaccga gagcggcgcc cgtccgccgg cgctcccgcc
      661 gccggaggcg tgcctgccgg tcaaggatct ccgggcccgg cagtgggacg acctgcccgg
      721 cacgctgccc gagctctacc gggcgatcga cgtccgcctg gcccgccccg agcgccggga
      781 agagggtgag atcgcccggc tggaagggtg gatgcgcttc accgacggcc ggcagcccga
      841 cgtggccgcc gttccgctgc tggccgacgc cttccctccg gccgtcctcg acatcgccgg
      901 cgccgcctgg gtcccgacgg tggagctcac cgtgcacgtg cggggccggc cggcgccggg
      961 gtggatcgtc gccagcttcc ggacgaggtt cctctgcaac ggctacttcg aggaggacgg
     1021 ggagctgtgg gactccgccg ggcggctcgt ggcgctgtcg cggcagctgg cggtcacaag
     1081 gggcgcccgg ccggcgtgag cccggccggg gccgcgaagc gccgggcggc taaccctgcg
     1141 cgccgcctcg ggtccaccag gtggggatgt ccagcggcgg agcccagtcg gtgcgctcct
     1201 cctcggaacg gaagaggctc gcctcggcgg gctcgggcag gacgatctcg atctcctccg
     1261 gcgccggcgc cggcgccggc ccgggggccg gggtggcggc gaccggcacc tcgatcggcg
     1321 cctcgagcgg agcgggcggc acggcgcccg ccgccggcgg gaactcgacg aagtacacct
     1381 tggccgtcgg ggtgtcggcg tcgtcggggt cggcgtcgtc ggggtcggcg tcgtcggcgg
     1441 cgaagccggc cgccgccgga gcggtgccgg ccgggctctc ccgcagcgtg gccagcgcct
     1501 cggccagcac ctggctcacg ccggccagcc ggtcgaggac ccggtcctgc gccttctcca
     1561 tctcggccag gcgggtgtcg gcgccggcca gtcggtcggc ggcctggcga cgggcctggg
     1621 ccacgatctc ctgggcctgc cactccgcct cggcccggac catgtcggcc tccatccggg
     1681 cctcgtcgag gatccgccgt ccctcctcgc aggcggcccg cacctcggcc tccgcctcgc
     1741 cccggaggcg gacggcctcg gcctgggcct cgacctgcat cttctcggcc gtctcggccg
     1801 ccgcctggag caccgcgccg atctcgtcgg cgagcgcccg atagctccgc cctgcgtgtt
     1861 cgatcatgtg accccccagc cgcaccgatc gtcgaacatc cctctccgag gagattcgtc
     1921 acgaacggcg caagtcctgc caattgccgc aaaaggttcc ggcccggcgg cccggacccc
     1981 gtccggtcga ccgggccgga tcgcgcgcgg ggtcgctggt tccttccctg gatcggcggg
     2041 attttccggg cccggacatt cggcccattc ccggcagcgg cgcaggcggc cggtaacagc
     2101 cgccccgttc ctgggtcaga atggttgccg acctcaggtt tcttcacatc cgaaaggaac
     2161 tgccatgccg gtcctggccg ccgagcggga aacagtcgga gtgtcgtacc ggcccgggaa
     2221 atgggccgcc ccgccggcgg cggcggcctc ccggcgcggc cgggggctgc tgggcggcgc
     2281 cgtccgggcg gcggccgtcg tcctcgtcgt cctcctggga tgggtcggcg tccaccacct
     2341 cggcgacctg atccccggtt tcggcaaccc cttcgccacc cagaaggtcg accggaccgg
     2401 ccccgccgtc ctcaaggcgc tcgacgaact ccaccagtac caggcggcca ccggctccta
     2461 ccaggtgatg gtcgacatcg agaaggacgc caagtacatc ccgtcgttcc tcaagggcga
     2521 gcggacgctg ttcctggccc aggggtccgt cgaagccggc gtcgacttct ccggcctcgg
     2581 gcccggcgcg gtcacggtga acccggacca ctcggtgacg atcagcctgc cccacgccac
     2641 gctgtccaag cccgtcctcg acaccgatgc cagtcacgtc gtcgaccgaa accggggcct
     2701 gctcgaccgg ctcgggtcgg tgttctccga cagcccgacg ggcgagcagg cgctctacgc
     2761 cgccgccgaa ccgaagctcc gggccgccgc cgacgcctcg ggtctcgtcg cccgggccga
     2821 tcagaacacg acgcagatgc tgcagaagct cgtcggctcg ctcggcttcg acaaggtcga
     2881 cgtggtgttc caggacaacc cggcgtaacg ctcgggatca gtctccggac gggccggaca
     2941 ggcgcaggcg gccgaggcgg agggcggcga tcacgagcgc cacggcggtg atgatgacga
     3001 ggcggacgac cgccggcccg ccctcgggga ggccggcccg gtgcagcgtg ccggcggcgt
     3061 cggggccgag gcgggcgtag accgcccggg cctcccagcc cggggaccac tgggccacgc
     3121 ccgacagcgc cgtgcccagg agccgctcgc cgaggacgac gaacgccagc gaccacacca
     3181 cggcccggcg gctgagcgcc ccgatgagga cgaagaccgc cacgtaggcc gccgatccgg
     3241 cgacagcggc caggaagagc ggcccgacgg cccccggcac cccggccagg acggcgccgg
     3301 cgccgaaggg cacggccagc gccgccacgg ccacggcggc gccggccagc cagcggccgg
     3361 cgaccacggt ggcgaaggag acgggcgaca gccaggtgaa atgcagcgtc ccggagcgga
     3421 cctcggcgcc gaggacggca tcgccgatca ccaggcaccc gaccggcagc accactccga
     3481 agaggccgcc gtccgccacc tgggccagcg ccaccggcgc cgagtcggga atcaggcggg
     3541 ccaacagggc gaagagcagc gctccggccg ccgggagcac cagcccgatg cgccgcttcg
     3601 tcgggaagca ggcccgcagc gcatagccgg cgcacacggc cacgagccgc ggctccgtcc
     3661 ggccccgtcc acccgccgac gtcctcaaac cggcgttcct tttccgctgt atcccggtaa
     3721 acgaacgcca gaacgcgccg ggcccggctc ccgtccgaag gcggccgccg gccccctccc
     3781 ggcaaccggc gttcctgagg gccgtcctgg caccctgagg aacgccagaa gagggccgcc
     3841 ggccgcctcc cggcaaccgg cgttcctgac gggcgtcctg gcgccgtgag gaacgccaga
     3901 actgggggag gggcgccgcc cgctcaccgg acgaggtccc ggaacagggc ttcgagggac
     3961 tcgtcgaggg ggcggacctc ccacaggcgc acgctggcct ggcgggccag gccagggagg
     4021 gccagggcga ggtcgccggc ccggcgggtg gccacggtca gccggtcgcc gtccacctcg
     4081 aggccgccga cggcgtcgtg gccggcgagg gcggcggcca gcacccgcgg cgggtcggcc
     4141 cgtaccagca cgcgccgggg ccggtcggcc atggcgtcgc ggatgccccg ccggtcgccg
     4201 gcggcggcca gccggcccgc caccagcacc atcacccgtt cggccaggcg ctcgacctcg
     4261 tagaggacgt gggagctgac caccaccgtc cgcccctggt cgccgagctg gcggaacagc
     4321 cggatgagat tggcccgctg gacggggtcg gcaccgttga gcggctcgtc gaggatcagg
     4381 acggtcgggt tggacaccag cgccgccgcc accttggccc gctgccgcat ccccttggag
     4441 aagccgtcca tcgcccggtc ggcgacgtcg agcagtccga cgacgcccag ccaccggtcg
     4501 ggcgcctccc ggtcggggac cgagtggagg gcggcccggt agcgggccag ctggcggggg
     4561 gtcaggccgc cggggacggc ctcgtcctcc gggacgagcc cgatgtggcc ctgcaccgag
     4621 cggtcgtggc gcgggtcgcc gccggccacc cacacccggc cggccgacac cgacagcagg
     4681 ccggtgaccg cccgcatcag cgtggtcttg ccggcgccgt tgggcccga
//
LOCUS       DATGJT010000203         2540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_131936, whole genome shotgun sequence.
ACCESSION   DATGJT010000203 DATGJT010000000
VERSION     DATGJT010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131936"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..838
                     /locus_tag="VKX24_03495"
     CDS             <1..838
                     /locus_tag="VKX24_03495"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ07573.1"
                     /translation="GVGPILNYLATQKPYNNGDCASGDYYILNNYNPGFAPNGSAQTG
                     TFTVPVQQNLPSIADELSAKDVSWAYYGEGWNNGKPLPSWCGICDPFQYDADYPKYLS
                     EGHIGGYNTFQQAVAKGNLPAVSFVKPGNDDGHPGYSTLSQFEGFAQSVITSVQNQPK
                     LWASTAIMVTMDEGGGYYDSGYVQPISFFGDGTRIPMIVVSPYTKPGYVSHEYSDHVS
                     IDKFIERNWKLSTLSSRSWDNLSNPVATSSNPYVPTNGPAISDLFDLFDFHHAQGGPN
                     RQ"
     gene            916..1473
                     /locus_tag="VKX24_03500"
     CDS             916..1473
                     /locus_tag="VKX24_03500"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019902551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HLJ07574.1"
                     /translation="MRIYTKTGDDGTTGLLYGGRIPKDDARTEAYGGTDEAVAAIGLA
                     RSLGAEAGGLADLLLDLQRQLFVVGAELATAPENAAKLKPGRSKVTEEMVTALEREID
                     RMLAVAPLPDYFVLPGSCSTSAAIDLARAVVRRAERATVGLHRSGDLADPVVLRFLNR
                     LSDLLFVAARYEESARGLVASPSHD"
     gene            1488..2339
                     /locus_tag="VKX24_03505"
     CDS             1488..2339
                     /locus_tag="VKX24_03505"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ07575.1"
                     /translation="MRIGIGLPNAIPGTPGSLVATWAARAEEQGFALLASIDRIVYGN
                     GEPLASLTAAAAVTATIELFTDILLAATRQPVPLAKQAATLDWLSGGRLTLGLAPGGR
                     QDDFAVAGMRFTNRGRRFDATLDTMVQTWRGELVGGANRPIGPRPARGEIPMLIGGTS
                     PQAIARVARVGSGWTAGSGAGDMIGPLISQVHQAWGAAGRSGTPRISRLTYFALGDNV
                     RATAEANLHDYYGPRADAVLSRTCWSPEQARAFVANADGLGVGEVVFFPAVGDLSQVD
                     RLADAVL"
     gene            complement(2352..>2540)
                     /locus_tag="VKX24_03510"
     CDS             complement(2352..>2540)
                     /locus_tag="VKX24_03510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07576.1"
                     /translation="TSAMYPRALIDRKTIAMADAYIARVGPPWPVRRLLLEARDATQR
                     ALRARACDIAARQASLGA"
BASE COUNT          385 a          949 c          849 g          357 t
ORIGIN      
        1 tggcgtcggg ccgatcctca actacctggc gacgcagaag ccctacaaca acggtgactg
       61 cgcctcgggc gactactaca tcctcaacaa ctacaacccg gggttcgccc ccaacgggag
      121 cgcccagacg gggacgttca ccgtgccggt ccagcagaat ctgcccagca tcgccgacga
      181 gctgtccgcc aaggacgtgt cctgggccta ctacggcgag ggttggaaca atggcaagcc
      241 gctccccagc tggtgcggca tctgcgaccc gttccagtac gacgccgact acccgaagta
      301 cctttccgag ggccacatcg gcggctacaa caccttccag caggcggtgg cgaaggggaa
      361 cctcccggcg gtgtcgttcg tgaagccggg caacgacgac ggtcaccccg gctactccac
      421 cctgtcgcag ttcgagggtt tcgcccagag cgttatcacg agcgtgcaga accagccgaa
      481 gctgtgggct agcaccgcca tcatggtcac gatggacgag ggcggcggct actacgacag
      541 cggctacgtg cagccgatca gcttcttcgg cgacggcacc aggatcccga tgatcgtggt
      601 ctcgccctac accaagccgg gctacgtgtc gcacgagtac tcggaccacg tctcgatcga
      661 caagttcatc gagcgcaact ggaagctgtc caccctgtcg tcccgaagct gggacaacct
      721 ctccaacccg gtggcgacct cgtccaaccc gtacgtcccc accaacgggc cggcgatcag
      781 cgacctgttc gacctgttcg acttccacca cgcgcagggc ggcccgaacc ggcagtagcg
      841 ctccacgatt gagcgccggg tcctgccggc caggggctcc ccgtgcgact tgcacccggc
      901 gctagattgc cggggatgcg catctacacc aagaccgggg acgacgggac caccgggctg
      961 ctctacggcg gccggatccc caaggacgac gcccggaccg aggcctacgg gggtaccgac
     1021 gaggccgtcg cggcgatcgg gctggcccgg tcgctcggtg ccgaagccgg cggcctggcc
     1081 gacctcctcc tcgacctcca gcgccagctg ttcgtcgtcg gcgccgagct ggccaccgcg
     1141 cccgagaacg cggccaagct gaagcccggc cggtccaagg tcaccgagga gatggtcacc
     1201 gccctcgagc gggagatcga ccggatgctg gcggtcgctc cgctccccga ctacttcgtc
     1261 ctcccgggat cgtgctcgac cagcgccgcc atcgaccttg cccgggcggt ggtgcgccgg
     1321 gcggagcggg cgaccgtcgg gctgcaccgg tccggcgacc tggccgaccc ggtcgtcctc
     1381 cgcttcctca accggctctc cgacctgctg ttcgtcgccg cccgctacga ggagagcgcc
     1441 cggggactgg tcgcctcccc gagccacgac tgagaggacc acaccccatg cgcatcggca
     1501 tcggactccc caacgccatc cccggcaccc ccggaagcct cgtggcgacc tgggcggcac
     1561 gggccgagga gcagggcttc gccctcctcg ccagcatcga ccggatcgtc tacggcaacg
     1621 gcgagccgct ggcgtcgctg acggccgccg ccgcggtgac ggcgaccatc gagctgttca
     1681 ccgacatcct gctcgcggcc acccgccagc cggtccccct ggccaagcag gcggcgacgc
     1741 tcgattggct ctccggcggg cggctgaccc ttggcctggc tccggggggg cggcaggacg
     1801 acttcgccgt cgccgggatg cgcttcacga accgcggtcg gcgtttcgac gccaccctcg
     1861 acaccatggt gcagacctgg cggggggagc tcgtcggtgg cgccaaccgc ccgatcggcc
     1921 cccggccggc ccgcggtgag atcccgatgc tgatcggcgg cacctccccg caggcgatcg
     1981 cccgggtcgc ccgggtgggg tcgggctgga cggccggcag cggggccggc gacatgatcg
     2041 ggccgttgat ttcccaggtc caccaggcct ggggcgccgc cggccgctcc gggaccccca
     2101 ggatctcgcg gctgacctac ttcgccctcg gcgacaacgt ccgggccacc gccgaggcca
     2161 acctgcacga ttactacggg ccccgggccg acgccgtgct ctcccgaacc tgctggagcc
     2221 cggagcaggc gcgggccttc gtggccaacg ccgacgggtt gggcgtcggc gaagtcgtgt
     2281 tcttcccggc cgtcggcgac ctgtcgcagg tcgaccggct ggccgacgcg gtgctctaga
     2341 gtcccggctc cctaagcccc gagtgacgcc tgccgggcgg caatgtcgca ggcccgagcc
     2401 cggagcgccc gctgggtggc gtcccgagcc tcgagcagca ggcgccgcac cggccacggc
     2461 gggccgaccc gggcgatgta ggcgtcggcc atggcaatgg ttttgcggtc gatcagcgcc
     2521 ctggggtaca tggcgctggt
//
LOCUS       DATGJT010000204         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_546391, whole genome shotgun sequence.
ACCESSION   DATGJT010000204 DATGJT010000000
VERSION     DATGJT010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_546391"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1130)
                     /locus_tag="VKX24_03515"
     CDS             complement(<1..1130)
                     /locus_tag="VKX24_03515"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HLJ07577.1"
                     /translation="MSAVAPAVAPSGGRRAEDPDKGPAARPAWRRWGRRASIVVSPED
                     QPLWARPALLVLAGVASFLYAWRSSGYLEIYYAAAVRSMSSSWHNFLYAAFDPSGTVS
                     TDKLPGAFWVQALSVRLFGLHDWAIVLPQILEGALTVLVLYRAVRRLAGPVAGIVAAA
                     VFAVAPANVTLNRGNISDSLMILFAVLAADAVVAAVHSGRWRHLLLGGLWVGLAFQAK
                     MVEAWLILPALALAFLVAGPRGPARRLAGVGALVAVAVVVSLSWMLYVSAQPTAGRPY
                     VDGSSHDSVFEQVFDYNGFGRINQPSPNAILFKTIGIGGLASTPPGWNRMVTGVFGRD
                     AGWLIPAALAGLVVGLAATRRRPRGDPLRASFLLWGSWLIVL"
     gene            1269..>2066
                     /locus_tag="VKX24_03520"
     CDS             1269..>2066
                     /locus_tag="VKX24_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004955185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ07578.1"
                     /translation="MSTAEQIPLSESDGTERAGPRAGTDVVETSIPARLDRLPWSRWH
                     WLVLIGLGTVWILDGLEVTIVGAVGSTITQHGSGISITTAKVGDAASMYIAGACVGAL
                     FFGHLTDRLGRKRLFLVTLGVYLVATVLTATSKNTAMFFAFRFFTGTGIGGEYAAINS
                     AIDELIPARVRGTIDLVVNGSYWLGTAAGAAATLVLLDPKLLAVDLGWRLCFLLGAVL
                     GLAILLVRRNLPESPRWLLTHGRADEADRVVSDIERQVTGSTGEELEE"
BASE COUNT          321 a          740 c          746 g          259 t
ORIGIN      
        1 atcaggacga tcagccagga cccccacagg aggaacgagg cccgcagcgg gtctccacgc
       61 ggccgccgcc tggtggccgc caggccgacc accaggccgg ccagtgcagc cgggatcaac
      121 cagccggcgt ccctcccgaa caccccggtg accatgcggt tccaaccggg aggggtcgag
      181 gcgaggccgc cgatgccgat cgtcttgaag aggatggcgt tcggcgaggg ctggttgatc
      241 cggccgaagc cgttgtagtc gaacacctgc tcgaacaccg agtcgtggct cgagccgtcc
      301 acatacggtc gtcccgccgt tggctgcgcg ctcacgtaga gcatccagct gagcgacacc
      361 acgacggcga ccgccaccag ggctccgacg ccggccaggc ggcgcgcggg gccccggggg
      421 ccggcgacca ggaaggccag ggccagggcg gggaggatca gccaggcctc gaccatcttg
      481 gcctggaagg cgagcccgac ccatagaccg ccgagcagca ggtgccgcca ccgtccgctg
      541 tgcaccgcgg cgacgacggc gtcagcggcc agcaccgcga acaggatcat gagggagtcc
      601 gagatgttgc cccggttgag ggtcacgttt gccggggcga cggcgaacac cgccgcggcg
      661 acgatgccgg ccaccggacc ggccagtcgg cgcacggccc ggtagagcac gaggacggtg
      721 agcgcgccct cgaggatctg gggaaggacg attgcccagt cgtggagccc gaagagccgg
      781 accgacaggg cctgcaccca gaacgccccc gggagcttgt ccgtcgagac cgtgcccgac
      841 gggtcgaagg ccgcgtacag gaagttgtgc caactcgagg acatcgaacg gacggccgcg
      901 gcgtagtaga tctcgaggta ccccgacgac cgccaggcgt agaggaacga cgcgacgccg
      961 gccagcacca ggagggccgg cctcgcccag agcggctggt cctccgggga cacgacgatc
     1021 gacgcccggc gaccccagcg ccgccaggcg ggccgcgctg ctggcccttt gtcggggtcc
     1081 tcggcccgcc gcccgccgct cggcgcgacg gccggcgcga ccgcgctcac cggtcacccg
     1141 gcgaggtttg cccccgggga gccggcgccc acgggcctcg cccgcggccg gaccgaggcg
     1201 cggcgcgacc aggccccggc tgccacgacc gggttagcag cggagtcggt cggggtagcc
     1261 ctccggcgat gagtaccgcc gagcagatcc cgctttccga gagcgacgga acggagcgcg
     1321 ccgggccgag ggcggggacc gatgtggtcg agacctcgat ccccgcccgg ctcgaccggc
     1381 ttccctggtc ccggtggcac tggctcgtgc tcatcggact ggggacggtg tggatcctcg
     1441 acggtctcga agtcacgatc gtgggcgcgg tcgggagcac catcacccag catggcagcg
     1501 gcatctcgat cacgacggcc aaggtcgggg acgcggccag catgtacatc gccggggcgt
     1561 gcgtgggcgc cctgttcttc gggcacctga ccgaccgtct gggccgcaag cgcctcttcc
     1621 tcgtgaccct gggggtctac ctggtggcga cggtgttgac cgccacgtcc aagaacaccg
     1681 ccatgttctt cgcgttccgc ttcttcaccg gcaccgggat cggtggcgag tacgccgcga
     1741 tcaactcggc gatcgacgag ctcatcccgg cccgggtgcg cggcaccatc gacctggtcg
     1801 tgaacggctc atactggctg ggcaccgcgg cgggcgcggc ggccaccctc gtcctgctcg
     1861 acccgaagct gctcgccgtg gacctcggct ggcgtctgtg cttcctcttg ggggccgtgc
     1921 tcggcctcgc catcctcctc gtccgccgca acctccccga gagccctcgc tggttgctca
     1981 cccacgggag ggccgacgag gccgaccggg tggtgagcga catcgaacgc caggtgaccg
     2041 ggtcgacggg cgaggagctc gaggaa
//
LOCUS       DATGJT010000205         2204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_650261, whole genome shotgun sequence.
ACCESSION   DATGJT010000205 DATGJT010000000
VERSION     DATGJT010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650261"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..672
                     /locus_tag="VKX24_03525"
     CDS             <1..672
                     /locus_tag="VKX24_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007633066.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HLJ07579.1"
                     /translation="GAAPAASVSTDNGRPTIAARGVGLVKGTPDTLRVVLGVETRATG
                     AQDALTQNNDKANALIKTLKDKGVEAKDIQTSQLSINPNYDNQGRRIVGYQVDNQVTA
                     TIHDLAGAGALIDAAAAAVGDAVRVQSIGFSIDDDSALKAEARTQAVHQAQLQADQMA
                     RAAGVKLGAIRLISEVPANSPTPYYDAVGRGAVGAPAAAAPAPVEPGQQELSLTVDVV
                     WDIAQ"
     gene            721..>2204
                     /locus_tag="VKX24_03530"
     CDS             721..>2204
                     /locus_tag="VKX24_03530"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HLJ07580.1"
                     /translation="MLYATESFTADETEVLERHFTNVDRPVFALVNLPEVVKGALFAR
                     YSRTHKSLRRLFLDEFADDVEAVSGDGPDETGIGLARADQLYDKVFLEYGDDSVAQLG
                     GVHLACEQASNVLTKVLEWGRLMAYLEQSTRYIAYDTRLDGRYRYWRDPEVLDSKLGA
                     RYVAAMDSLFDGYAAALPKVMDWARRAFPKEPDDPDFVWRQTIKAKACDAVRGMLPAA
                     SLSNVGIYGTGQAYEALLLRMRAHPLPEVRRYAGMMLDELRLVIPSFLKRVDRPDRGG
                     AWSAYLEERRERTEAMTAHLLGGEEPEPRPSVTLVDFDPDGEDKVLAAILYAASDLPE
                     DQLAARVRTLAPEERFALLDAYVGERGNRRYKPGRAFERTGYRFDVLADYGAFRDLQR
                     HRMLTIEWQPLSTRHGYEVPEAVGEAGVGALFEEAMATSAELYEELSGPFPVQAAYAV
                     ALAYRIRFTMQMNAREAMHVLELRTTPQGHPAYRAVCREMWRLIR"
BASE COUNT          333 a          825 c          763 g          283 t
ORIGIN      
        1 ggtgccgcgc ccgccgcctc ggtctccacc gacaacggcc ggccgaccat cgccgcccgc
       61 ggtgtcgggc tcgtgaaggg gacacccgac accctccggg tggtgctcgg cgtcgagacc
      121 cgcgccaccg gggcccagga cgcgctgacc cagaacaacg acaaggccaa cgctctcatc
      181 aagacgttga aggacaaggg cgtcgaggcc aaggacatcc agacgtccca gctgtcgatc
      241 aaccccaact acgacaacca gggccggcgg atcgtgggct atcaggtcga caaccaggtg
      301 accgccacca tccacgacct cgccggggcc ggggcgctga tcgacgccgc ggcggcggcg
      361 gtgggcgacg ccgtgcgcgt ccagtcgatc ggcttctcca tcgacgacga cagcgccctc
      421 aaggccgagg cccgcaccca ggccgtccac caggcgcagc tgcaggccga ccagatggcc
      481 agggccgccg gcgtcaagct cggcgccatc cggctgatct ccgaggtgcc ggccaactcg
      541 ccgacgccgt actacgacgc cgtcgggcgg ggcgcggtgg gcgcgccggc ggccgccgcg
      601 ccggcgcccg tcgagcccgg ccagcaggag ctcagcctca cggtggacgt cgtctgggac
      661 atcgcccagt agagaacatc gaccagtgtc cgtgggcggg gggttacgat ccgcccgccc
      721 atgctctacg ccaccgagtc cttcaccgcc gacgagaccg aggtgctcga gcggcacttc
      781 accaacgtcg accgcccggt cttcgccctg gtcaacctgc cggaggtggt gaagggggcg
      841 ctgttcgccc gctactcccg cacccacaag agcctgcgcc ggctgttcct cgacgagttc
      901 gccgacgacg tcgaggcggt ttccggcgac ggccccgacg agacggggat cggcctcgcc
      961 cgggcggacc agctctacga caaggtcttc ctggagtacg gcgacgactc ggtggcccag
     1021 ctcggcggcg tgcacctggc ctgcgagcag gcgtcgaacg tgctgaccaa ggtgctggag
     1081 tggggccggc tgatggccta cctcgagcag tcgacccgct acatcgccta cgacacccgc
     1141 ctcgacggcc gctaccgcta ctggcgcgac cccgaggtcc tcgactcgaa actcggcgcc
     1201 cgctacgtgg cggccatgga ctcgctgttc gacggctacg ccgcggccct ccccaaggtg
     1261 atggactggg cccgccgggc gttccccaag gagccggacg accccgactt cgtctggcgc
     1321 cagacgatca aggccaaggc ctgcgacgcc gtccggggga tgctgcccgc cgccagcctg
     1381 tccaacgtgg ggatctacgg gacgggccag gcctacgagg cgctgctgct gcggatgcgg
     1441 gcccacccgc tgccggaggt gcgccgctac gccgggatga tgctcgacga gctgcggctg
     1501 gtgatcccgt cgttcctcaa gcgtgtcgac cggcccgacc ggggcggggc gtggagcgcc
     1561 tacctcgagg agcgccggga gcgcaccgag gccatgaccg cccacctgct cgggggcgag
     1621 gagcccgagc cccggccgtc cgtgacgctg gtcgactttg accccgacgg cgaggacaag
     1681 gtgctggccg ccatcctcta cgccgcctcc gacctgcccg aggaccagct ggccgcccgg
     1741 gtccgcaccc tggcccccga ggagcgcttc gccctgctcg acgcctacgt gggggagcgg
     1801 ggcaaccggc gctacaagcc gggccgggcc ttcgagcgga cggggtaccg cttcgacgtc
     1861 ctcgccgact acggcgcctt ccgcgacctc cagcgccacc gcatgctgac gatcgagtgg
     1921 cagccgctgt cgacccggca cggctacgag gtgcccgagg ccgtcggcga ggccggcgtc
     1981 ggagcgctgt tcgaggaggc catggccacc tcggcggagc tgtacgagga actgtcgggt
     2041 ccgttccccg tccaggcggc ctacgcggtg gcgctggcct accgcatccg cttcaccatg
     2101 cagatgaacg cccgcgaagc catgcacgtc ctcgagctgc ggacgacgcc ccagggacac
     2161 cccgcctacc gggcggtgtg ccgggagatg tggcggctca tccg
//
LOCUS       DATGJT010000206         3758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_858112, whole genome shotgun sequence.
ACCESSION   DATGJT010000206 DATGJT010000000
VERSION     DATGJT010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3758
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858112"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..780
                     /gene="fabI"
                     /locus_tag="VKX24_03535"
     CDS             7..780
                     /gene="fabI"
                     /locus_tag="VKX24_03535"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017956036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HLJ07581.1"
                     /translation="MALLEDKRILVTGVLTDASLAFAVARLALDEGAEVVLSGAGRGL
                     SLTRRTARKLPSEVDVLEIDVKEPAQLEAAAAELDRRWGRLDGLLHAIGFAPAACLGG
                     DILRAGWDDVSEALHVSTYSLKALVEATAPLLEAAGSASVVGLDFDARVAWPAYDWMG
                     VAKAALESLSRYLARDLGSRGVRVNLVAAGPIRTMAAKSIPSFSAFEDTWGERAPLGW
                     DVADPEPVARACVALLSDLFPKTTGELLHVDGGVHAMGA"
     gene            complement(800..1714)
                     /locus_tag="VKX24_03540"
     CDS             complement(800..1714)
                     /locus_tag="VKX24_03540"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ07582.1"
                     /translation="MTSGGLTVAVVIPTRDRPELLGDALRAVSRLERVPERVIVVDSA
                     SRDRRVGQVADAAGTTVVRIEEPGASRARNVGAAVSDEDLIAFTDDDCLVDPGWTRAI
                     VEAFSSPSAPDFITGQVRVDARPRRRGTVELSVLVDQNPRTFEAGDDPTTFGHSANMA
                     WRRQALLDIGGFDERLGAGGQLRAAEDVDLGWRAVRAGLRGEYCPEAVVTHLRWRTRR
                     ESVRIFHDYGVGFGALAVKRSRLDHIPRATMLRSLLVDDGLARVVGPLAKGHEMAALA
                     EAAKFLGSLRGAYRARGLALESGRFTEP"
     gene            complement(1711..3132)
                     /locus_tag="VKX24_03545"
     CDS             complement(1711..3132)
                     /locus_tag="VKX24_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007379936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLJ07583.1"
                     /translation="MEVRDKLYIGGSWVPSTGKGSLEVVNSATEEVIGTVPEGTPDDV
                     DKAVRAAAEAFPAWSATSVDERSKTLLRVQEALTARTPDLATLITNELGMPFTLSNLI
                     QVGLPVMNFANAAQLVTEFPFEEEVGNSLVVREPIGVVGCITPWNYPMHQIALKVAFA
                     MAAGCTIVLKPSEVTPLNAFVLAEIFAEIDLPAGVFNLVTGVGPVVGEAIASHPLVDM
                     VSFTGSTRAGKRVMELASQGVKRVALELGGKSANVLLDDADFQSAVPAGVAACYINSG
                     QTCSALTRMLVPRSRLAEAEELAVKTAETYKPGDPYDAETRLGPLVSAVQRDRVRGYI
                     QKGIDEGAKLLTGGAEPPEGLEEKGYYVRPTVFSEVRPDMTIAQEEIFGPVLSIIPYD
                     TEEEAIEIANGTTYGLAGGVWAGDKTRAEKVARRLRAGQVEVNGGGFNPLAPFGGYKQ
                     SGIGREGGKFGLEEFLEVKALQR"
     gene            complement(3210..>3758)
                     /locus_tag="VKX24_03550"
     CDS             complement(3210..>3758)
                     /locus_tag="VKX24_03550"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase fold domain-containing
                     protein"
                     /protein_id="HLJ07584.1"
                     /translation="FPAAVDDALAVYGALAKAEEGPVVVSGDSAGGGLAVTTVSGAAA
                     RGLATPAALLCWSPWVDLAPGALDDPGRAADPVLTVEWLEQRAQDYLGDGDVAHPSAS
                     PLRGDLASLPPTLVMVGTRELLRPQAADLAKGAASAGVAAELEELPGAIHLWMLWLPD
                     APESRSAFERAGAFVRAAAGGG"
BASE COUNT          556 a         1342 c         1320 g          540 t
ORIGIN      
        1 cccgccgtgg cactgctcga ggacaagcgc atcctggtca ccggcgtcct caccgacgcg
       61 tcgctcgcct tcgccgtcgc ccggctggcg ctggacgaag gcgccgaggt ggtgctgtcg
      121 ggcgcgggga gagggctttc gctcacccgg cgcacggcgc gcaagctacc gagcgaggtc
      181 gacgtcctcg agatcgacgt caaggagccg gcacagctcg aagcggccgc cgccgagctc
      241 gatcggcgct gggggcggct cgacggcctc ctgcacgcca tcggcttcgc gccggcggcc
      301 tgcctcggag gggacatcct ccgggcggga tgggacgacg tctccgaagc gctgcacgtc
      361 tcgacctatt cgctcaaggc cttggtcgag gccaccgctc ccctcctcga ggcagcaggc
      421 tcggcgtcgg tggtgggcct cgacttcgac gcccgggtgg cgtggcccgc ctacgactgg
      481 atgggggtgg ccaaggctgc gctcgaatcg ctgagccgct acctcgcccg cgatctcggc
      541 agtcgcggcg tgcgcgtcaa cttggtggcg gcggggccga tccggaccat ggcggccaag
      601 tccatcccga gcttctcggc gttcgaggac acctggggcg agcgggcgcc gctcggatgg
      661 gacgtcgccg atcccgagcc ggtcgcccga gcctgcgtgg cgctgctctc cgacctcttc
      721 ccgaagacca caggcgagct tctgcacgtc gacggcggcg tccatgccat gggggcctga
      781 agccgccgag gacaagaggt cacggttctg tgaaccggcc gctctcgagt gcaagccctc
      841 gggcccggta tgcccctcgc agactcccga ggaacttggc agcctccgca agtgccgcca
      901 tctcgtggcc tttggcgagc ggcccaacga cccgagccaa tccgtcgtcg acgaggagtg
      961 accggagcat ggtggcgcga gggatgtggt cgaggcgcga ccgcttgact gccagcgccc
     1021 cgaaaccgac cccgtagtcg tgaaagatcc tcacggactc tcgtcgtgtg cgccagcgga
     1081 gatgagtcac gaccgcctcg gggcagtact cgccgcgcag gccggcgcgc acagcccgcc
     1141 aacccaggtc cacgtcctcg gcggcgcgca actgcccgcc tgcgcccaga cgctcgtcga
     1201 agccgccgat gtcgagcaag gcctgccggc gccacgccat gttggcggag tggccgaacg
     1261 tcgtcgggtc gtccccggct tcgaaagttc tcgggttctg atcgacgagg accgacagct
     1321 cgaccgtccc tcgccggcgg ggcctggcgt cgacccgcac ctggccggtg atgaagtcgg
     1381 gcgccgaggg actcgagaag gcctcgacga tcgccctggt ccatcccggg tccaccaggc
     1441 agtcgtcgtc ggtgaaggcg atcaggtcct cgtcagacac ggccgccccg acgttgcgcg
     1501 cccggctcgc gccgggttcc tcgatgcgga ccacggtggt cccggccgcg tccgccacct
     1561 ggcccacgcg gcggtcgcga gaagcggaat cgacgacgat gacccgttcc ggaacgcgct
     1621 cgagccgcga cacagccctg agcgcgtcgc caagcaactc cgggcggtca cgcgtcggga
     1681 tgacgacggc gaccgtgagg ccgccggatg tcagcgctgg agcgccttga cctcgaggaa
     1741 ctcctccagc ccgaacttgc cgccttcacg gccgataccc gactgcttgt agccgccgaa
     1801 gggggcaagt gggttgaagc cgccaccgtt cacctcgact tggccggcgc gcagccgtcg
     1861 ggcgaccttc tcggcgcggg tcttgtcgcc ggcccacacc ccgccggcca acccgtacgt
     1921 cgtgccgttg gcgatctcga tcgcctcctc ctcggtgtcg taggggatga tcgagaggac
     1981 ggggccgaag atctcctctt gggcgatggt catgtcggga cgcacctcgg agaagaccgt
     2041 cggacgcacg tagtagccct tctcctcgag cccctcgggc ggctccgctc cgccggtgag
     2101 gagcttggcg ccctcgtcga tgcccttctg gatgtagccg cggacgcggt cgcgctgcac
     2161 ggcggacacg agcggaccca gacgggtctc ggcgtcgtag ggatctcccg gcttgtaggt
     2221 ctcggccgtc ttcacggcca gctcttcggc ttcggcaagc cggctgcggg gcacgagcat
     2281 acgggtaaga gccgagcagg tctgaccgga gttgatgtag caggccgcca cgccagccgg
     2341 caccgccgac tggaagtcgg catcgtcgag gagcacgttg gcggacttgc cgccgagctc
     2401 gagggccacc cgcttcacgc cctgcgaggc gagctccatg acccgcttgc cggcacgggt
     2461 cgacccggtg aacgacacca tgtcgacgag cgggtgcgag gcgatggcct cgcccaccac
     2521 cgggcccacg ccggtcacca ggttgaagac tccggcgggc agatcgatct cggcgaagat
     2581 ctcggcaagg acgaaggcat tgagcggcgt cacctcgctc ggcttgagca cgatcgtgca
     2641 gccggccgcc atggcgaagg ccaccttcag ggcgatctgg tgcatcgggt agttccaggg
     2701 cgtgatgcat ccgacgacgc cgatcggctc gcgcacgacg agcgagttgc cgacctcctc
     2761 ctcgaagggg aactcggtca cgagctgcgc ggcgttggcg aagttcatca cgggcaagcc
     2821 gacctggatc aggttggaca gggtgaacgg catgcccagc tcgttggtga tgagcgtggc
     2881 caggtcgggg gtccgcgccg tgagggcttc ttggacccgg agcagcgtct tcgaccgctc
     2941 gtcgaccgag gtggccgacc atgcagggaa cgcctcggcg gcggcccgca ccgccttgtc
     3001 gacgtcgtcg ggcgtgccct cggggactgt gccgatgacc tcctcggtgg cggagttgac
     3061 cacctcgagg ctccccttgc cggtcgacgg cacccacgaa ccgccgatgt agagcttgtc
     3121 gcggacctcc atggtgggcc tcctcgctgg ccgaacgtgc cgtgacggcg tgcgagagat
     3181 gctaggcgtt cgccgctggc ggcgccccgt cagcccccgc cggccgcggc ccgtacgaac
     3241 gcaccggccc gctcgaaggc cgaccgcgac tccggggcgt cgggcagcca gagcatccag
     3301 aggtggattg caccgggaag ctcttcgagc tcggcggcga caccggcgga ggccgctccc
     3361 ttggcgaggt cagccgcctg aggccgcagg agctccctcg tgcccaccat gaccagggtt
     3421 ggcggcagcg acgccaggtc gccgcgcagc ggagacgccg acgggtgcgc gacatccccg
     3481 tcaccgaggt agtcctgcgc ccgctgttcg agccactcca cggtcagcac gggatcagcg
     3541 gcgcggccgg gatcgtccaa cgcgcccggg gcaaggtcca cccaaggcga ccagcacagc
     3601 agcgccgccg gggtggccaa cccgcgtgcg gcggcgcccg acaccgtcgt cacggcgagg
     3661 cctcccccag ccgagtcacc cgacacgacg accgggccct cctccgcctt ggcgagcgcg
     3721 ccgtacacgg ccagcgcgtc gtccacggcg gcggggaa
//
LOCUS       DATGJT010000207         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_650338, whole genome shotgun sequence.
ACCESSION   DATGJT010000207 DATGJT010000000
VERSION     DATGJT010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650338"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2225
                     /gene="nirB"
                     /locus_tag="VKX24_03555"
     CDS             <1..>2225
                     /gene="nirB"
                     /locus_tag="VKX24_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009633352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008942 - nitrite reductase [NAD(P)H]
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0042128 - nitrate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit NirB"
                     /protein_id="HLJ07585.1"
                     /translation="AVAYDALVLATGSYPFVPPIEGGAVDVSAGPGCFVYRTIEDLDA
                     IRAYAEDCGTGAVIGGGLLGLEAAGALLGLGLQTHVVEFAPRLMALQVDDGGGATLRR
                     TIEAMDIAVHTSKSTALVMRPAAGGRVEGLLFADGTTLATDMVVYSAGIRPRDELARA
                     AGLELGERGGVLTDEGCRTSDPSVYAIGECAAVAGRVYGLVSPGYAQARVVADRLAGG
                     DAAFDGADLSTKLKLLGVDVASFGDAQGATPGCHELTFDDPIAGVYKKIVISPDKAKL
                     LGGILVGDATDYGTLHQWMASNTDLPLHPSDLILPDRKAGAGKPLLGVAAIGADSTVC
                     NCNNVSKGAICAAIAGGGLTTVGQVKAATKAGTGCGSCVPLCQAILHHELEKAGVAVD
                     RSLCEHFPFTRQQLFDIVRVRQVRTFEELISGWGRGRGCEICRPAVGSMLASLWNEYV
                     LDPAHAGLQDTNDRFLANMQKDGSYSIVPRVPGGEITPEKLIALGEVAREFNLYSKIT
                     GAQRIDLFGARLDQLPEIWRRLIDAGFESGHAYGKALRTVKSCVGSSWCRFGQLDSVS
                     LAIDIELRYRGFRAPHKLKSAVSGCARECAEAQGKDFGVIATETGWNVYVCGNGGMRP
                     QHAVLLVENVDTEHVFKYLDRFLMFYTRTADRLERTAPWFNKLEGGIEYLRAVIVDDV
                     LGIAADLEAEMQRQVDSYRCEWKETIEDPEKVARFKTFVNADGVFDADQLYVLERGQK
                     RP"
BASE COUNT          329 a          787 c          801 g          308 t
ORIGIN      
        1 gccgtggcct acgacgccct ggtgctggcc acgggctcgt acccgttcgt gccgccgatc
       61 gagggcgggg ccgtcgacgt gagcgccggg ccgggctgct tcgtctaccg gacgatcgag
      121 gacctcgacg ccatccgggc ctacgccgag gactgcggca ccggcgccgt catcggcggc
      181 ggcctgctgg gcctcgaggc ggccggagcg ctgctcggcc tcgggctgca gacgcacgtc
      241 gtcgagttcg ccccccggct catggccctc caggtcgacg acggcggcgg ggcgacgctg
      301 cggcgcacga tcgaggccat ggacatcgcc gtgcacacct cgaagtccac ggcgttggtg
      361 atgcgcccgg ccgccggcgg gcgggtggaa gggctgctgt tcgccgacgg gacgacgctg
      421 gcgaccgaca tggtggtgta ctcggccggg atccggcccc gggacgagct ggcccgggcg
      481 gcgggcctcg agctcggcga gcggggcggc gtgctgaccg acgaaggctg ccgcacctcc
      541 gacccctcgg tctacgccat cggcgagtgc gcggcggtgg ccgggcgggt ctacggcctc
      601 gtcagccccg gctacgccca ggcccgggtg gtggccgacc gcctcgccgg cggcgacgcc
      661 gccttcgacg gcgccgacct gtcgaccaag ctcaagctcc tcggcgtcga cgtggccagc
      721 ttcggcgatg cgcagggcgc cacgcccggc tgccacgagc tgaccttcga cgaccccatc
      781 gccggcgtct acaagaagat cgtgatctcc ccggacaagg cgaagctgct cggcgggatc
      841 ctcgtcggcg acgccaccga ctacggaacg ctgcaccagt ggatggcgtc gaacaccgac
      901 ctcccgctgc acccgagcga cctgatcctc cccgaccgca aggccggcgc cgggaagccg
      961 ctcctcggcg tggcggccat cggcgccgac tccacggtct gcaactgcaa caacgtgtcg
     1021 aagggcgcca tctgcgccgc catcgccggc ggcgggctga cgaccgtggg ccaggtgaag
     1081 gcggccacca aggcgggaac cgggtgcggc agctgcgtcc cgctgtgcca ggccatcctg
     1141 caccacgagc tggagaaggc cggcgtcgcc gtcgaccgca gcctctgcga gcacttcccc
     1201 ttcacccgcc agcagctctt cgacatcgtg cgggtccgcc aggtccgcac gttcgaggag
     1261 ctgatctcgg gctggggccg gggccggggt tgcgagatct gccggccggc ggtggggtcg
     1321 atgctggcct cgctgtggaa cgagtacgtc ctcgacccgg cccacgccgg cctgcaggac
     1381 accaacgacc ggttcctggc caacatgcag aaggacggca gctactcgat cgtgccccgg
     1441 gtgcccggcg gcgagatcac gcccgagaag ctcatcgccc tcggcgaggt ggctcgggag
     1501 ttcaacctct attccaagat caccggggcg cagcgcatcg acctgttcgg cgcccggctc
     1561 gaccagctgc cggagatctg gcgccggctg atcgacgccg gcttcgagag tggtcacgcc
     1621 tacggcaagg ccctccgaac ggtgaagtcc tgcgtcggga gcagctggtg ccgcttcggg
     1681 cagctggact cggtgtcgct ggccatcgac atcgagctgc gctaccgggg gttccgggct
     1741 ccccacaagc tgaagtcggc ggtgtcgggc tgcgcccggg agtgcgccga ggcccagggc
     1801 aaggacttcg gcgtcatcgc caccgagacg ggctggaacg tctacgtctg cggcaacggc
     1861 gggatgcggc cacagcacgc cgtgctgctg gtggagaacg tcgacaccga gcacgtcttc
     1921 aagtacctcg accggttcct catgttctac acgaggacgg ccgaccggct ggagcggacc
     1981 gcgccgtggt tcaacaagct ggaggggggg atcgagtacc tgcgggcggt gatcgtcgac
     2041 gacgtcctcg gcatcgccgc cgacctcgag gccgagatgc agcgccaggt cgactcctac
     2101 cgctgcgagt ggaaggagac gatcgaagac ccggagaagg tggcccggtt caagacgttc
     2161 gtcaacgccg acggcgtgtt cgacgccgac cagctctacg tcctcgagcg gggccagaag
     2221 cgccc
//
LOCUS       DATGJT010000208         2095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_753689, whole genome shotgun sequence.
ACCESSION   DATGJT010000208 DATGJT010000000
VERSION     DATGJT010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753689"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VKX24_03560"
     CDS             complement(<1..237)
                     /locus_tag="VKX24_03560"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLJ07586.1"
                     /translation="MRVLVTGGAGFIGAGLVERLLAEGEDVDVIDDLSTGSLANLGPA
                     RAMAGGKLKFHRLDVRHPGLAELLDQRRPEVVFHL"
     gene            complement(234..1241)
                     /locus_tag="VKX24_03565"
     CDS             complement(234..1241)
                     /locus_tag="VKX24_03565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NDP-sugar synthase"
                     /protein_id="HLJ07587.1"
                     /translation="MKAIVLAGGEGTRLRPLTWTTPKPLLPIVNRPFLEHQLAWLAGH
                     GVTEVVLSLGYKSDAFAGRSFSDLPLQVAAEPEPLGTAGAIRFAAEAGGVTSRFLVCN
                     GDVLTDLDVSGLVRFHEERGAEATIALTRVEDPSAFGVVPTDGDGRVLRFVEKPPPGE
                     APTDWVNAGTYVLEPTVLDDIPSGRAVSIERETFPGILARGGGLYALPSPAYWLDIGT
                     PAKYLEANANRLARGGGASLLGPGAAVAPGAAVEGSVLGAGAVVEAGAKVLRSVLFEG
                     ARVGAGAEVTDSVLAAGAHVEAGAAVSGVSIVGPGAVVPPGERLTGARVEAPGTPGAP
                     A"
     gene            complement(1256..1888)
                     /locus_tag="VKX24_03570"
     CDS             complement(1256..1888)
                     /locus_tag="VKX24_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07588.1"
                     /translation="MGKASRKKGPVKARAQVRRGRTGFIVGVAGLFVAGVALIALAKN
                     GSRTPSAERPGVNDHWHAAYVVDICGTNQPNMLQPNTLIGLHTHSDGLIHVEPYVTGS
                     LLDRGSNATLARFAEGEPGFKLTSTEVQVPGGHLMRNGDKCDGTDPGKVTIRQWPDAT
                     KETFKDYTNPKDVKIIDRSAITVAFVPPGSAIGKPPSISNLANPNAGEAG"
     gene            complement(1915..>2095)
                     /locus_tag="VKX24_03575"
     CDS             complement(1915..>2095)
                     /locus_tag="VKX24_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07589.1"
                     /translation="VSTAGRPYRMIAEHHRSLLRFAGVRFTGPRRALLGPAAAFLAAR
                     GALAMAHHRLAAVRR"
BASE COUNT          265 a          758 c          804 g          268 t
ORIGIN      
        1 gagatggaag acgacctccg gccgccgctg gtcgaggagc tccgcgaggc cggggtggcg
       61 gacgtcgagg cggtggaact tgagcttccc ccccgccatc gcccgggccg gcccgaggtt
      121 ggccagcgag ccggtggaga ggtcgtcgat gacgtcgacg tcctcgccct cggccagcag
      181 ccgttcgacg aggccggcgc cgatgaagcc ggcgccgccg gtgaccagga ctctcatgcc
      241 ggcgctccgg gggtccccgg cgcttcgacg cgggcgccgg tcagccgctc gccgggcggc
      301 acgaccgccc ccggcccgac gatgctcacg cccgagaccg ccgcccccgc ctcgacgtgg
      361 gccccggccg ccagcaccga gtcggtcacc tcggcgccgg ccccgacccg ggcgccctcg
      421 aacagcaccg accgcaggac cttggcgccg gcctccacca cagccccggc gccgaggacg
      481 gagccctcga ccgccgctcc gggcgccacg gcggccccgg gcccgaggag ggacgccccg
      541 ccgccccggg ccaggcggtt ggcgttggcc tcgaggtact tggccggggt gccgatgtcg
      601 agccagtagg ccggggacgg cagggcgtag aggccgccgc cccgggccag gatcccgggg
      661 aacgtctccc gctcgatcga caccgcccgg cccgacggga tgtcgtcgag gaccgtcggc
      721 tcgagcacgt aggtgccggc gttgacccag tcggtcggcg cctcgcccgg cggcggcttc
      781 tccacgaacc gcaggacccg cccgtccccg tcggtgggaa cgaccccgaa ggccgacggg
      841 tcctcgaccc gggtcagggc gatcgtggcc tcggcccccc gctcctcgtg gaaccgcacc
      901 aggcccgaga cgtcgaggtc ggtgaggacg tcgccgttgc agaccaggaa ccggctggtc
      961 accccgccgg cttccgcggc gaagcggatg gcgccggcgg tgccgagcgg ctccggctcc
     1021 gccgccacct gcaacgggag atcggagaag gatcggccgg cgaaggcgtc ggacttgtag
     1081 ccgagcgaca gcacgacctc ggtcacgccg tggccggcca gccaggccag ctggtgctcg
     1141 aggaacggcc ggttgacgat ggggagcagg ggcttcgggg tggtccaggt caggggccgg
     1201 agccgggtgc cctcgccgcc ggccaggacg atggccttca cggcggccga aggtactacc
     1261 cggcctcgcc ggcgttgggg ttggccaggt tgctgatgct cggcggcttg ccgatggcgc
     1321 tgccgggcgg gacgaacgcc accgtgatgg cggaccggtc gatgatcttg acgtccttgg
     1381 ggttcgtgta gtccttgaac gtctccttgg tggcgtccgg ccactggcgg atcgtcacct
     1441 tccccgggtc ggtcccgtcg cacttgtcgc cgttgcgcat caggtgcccg ccgggcacct
     1501 ggacctcggt ggaggtcagc ttgaagccgg gctccccttc ggcgaaacgg gccagcgtgg
     1561 cgttggaccc ccggtcgagc agtgaacccg tcacgtaggg ctcgacgtgg atcagcccgt
     1621 cgctgtgggt gtggagcccg atcaacgtgt tcggctggag catgttcggc tggttcgtgc
     1681 cgcagatgtc gacgacgtag gcggcgtgcc agtggtcgtt caccccgggg cgctcggcgc
     1741 tcggggtgcg cgagccgttc ttggccaggg cgatgagtgc gacgccggcg acgaagagcc
     1801 cggcgacccc gacgatgaag cccgtccggc cccggcggac ctgggcccgg gccttgaccg
     1861 ggcccttctt ccgcgacgcc ttccccatgg cccgccaggc taccggcgga ccggctaccg
     1921 gcggacggcg gccaggcggt ggtgggccat ggccagcgcc ccccgggcgg cgaggaaggc
     1981 ggcggccgga ccgagcaggg cccgcctggg cccggtgaag cggacgccgg cgaagcgcag
     2041 cagcgagcgg tggtgctcgg cgatcatccg gtaggggcgg ccggcggtgc tcacg
//
LOCUS       DATGJT010000209         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_650647, whole genome shotgun sequence.
ACCESSION   DATGJT010000209 DATGJT010000000
VERSION     DATGJT010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650647"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1148)
                     /locus_tag="VKX24_03580"
     CDS             complement(<1..1148)
                     /locus_tag="VKX24_03580"
                     /inference="COORDINATES: protein motif:HMM:NF013662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HLJ07590.1"
                     /translation="MAILTRVLDPEPVPTLDAYIAAGGGKGLDAARKLGPAATIEEIT
                     ASGLRGRGGAGFPTGRKWAAVVGNEPADPRPTVVVNASEGEPGSFKDRTLLRRNPYRI
                     AEGAVIAAEAVGAERIIFALKASFRPELERLDAALAEIGRAGWTELPFLVVEGPSEYL
                     FGEETALLEVVDGREPFPRIAPPYRRGVDDVGADPVSGAGSVMATPGGQTPAAPALVN
                     NAETMANVPGILAQGAAWFRQAGTDASPGTIVCTVTGGGRRAGVAEFEMGTPLAEVIE
                     TIGGPGRPIKAVLSGVANPFLPGDRLDTPVSYEAMEAAGAGLGAAGFLLFSEADDLAA
                     AAAGVARFLATESCGQCTPCKQDGLAIADILTRIVCGEARPDDPDQLRS"
     gene            1260..1412
                     /locus_tag="VKX24_03585"
     CDS             1260..1412
                     /locus_tag="VKX24_03585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07591.1"
                     /translation="MGTKQPEEPKETTSTGTGASEDTGADVDDARKAGMRPTGSGGSA
                     PPSENR"
     gene            1447..>2099
                     /locus_tag="VKX24_03590"
     CDS             1447..>2099
                     /locus_tag="VKX24_03590"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HLJ07592.1"
                     /translation="MPARTSAVDLPNQWYVACLGSELGGRRPVARIVHDRPLCLFRDA
                     SGRPAAVLDRCPHRNVPLSLGRLRDGLLECRYHGWRFDRTGACRAVPGLCPADGDGDA
                     GRRGRAAESVPCAEQDGFVWVFPGSGAPPPGGPAFRFPCVDAPGYDTVRRSLRTAGTV
                     HAVAENALDVPHTAFLHGGLFRGAGRDPVEIDVVVRTAADRIEAEYVGEPRPPGLAGR
                     "
BASE COUNT          250 a          762 c          825 g          262 t
ORIGIN      
        1 gagcggagct ggtcggggtc gtcggggcgg gcctcgccgc agacgatgcg ggtgaggatg
       61 tcggcgatgg ccaggccgtc ctgcttgcag ggcgtgcact ggccgcagga ctcggtggcc
      121 aggaagcggg ccacgccggc cgcggcggcg gcgaggtcgt cggcctccga gaagagcagg
      181 aaaccggcgg cgccgaggcc ggcgccggcc gcctccatgg cctcgtagct gaccggggtg
      241 tcgagccggt cgccgggcag gaacgggttg gccacgccgg acagcacagc cttgatcggc
      301 cggccggggc ccccgatggt ctcgatcacc tcggccagcg gggtgcccat ctcgaactcc
      361 gccaccccgg cccggcgtcc gccgccggtg acggtgcaga cgatggtgcc cggcgaggcg
      421 tccgtgccgg cctggcggaa ccaggcggcg ccctgggcca ggatgccggg gacgttggcc
      481 atggtctcgg cgttgttgac cagcgccggg gcagccgggg tctggccgcc gggggtggcc
      541 atgacggagc cggcgccgga gacggggtcg gctccgacgt cgtcgacgcc ccggcgatag
      601 ggcggggcga tgcgggggaa cggctcccgg ccgtcgacca cctcgaggag agccgtctcc
      661 tcgccgaaca ggtactccga cgggccctcg acgaccagga acgggagctc ggtccacccg
      721 gcccggccga tctcggccag ggcggcgtcg agccgctcca gctccggccg gaaggaggcc
      781 ttgagggcga agatgatccg ctcggcgccg acggcctcgg cggcgatgac cgccccttcg
      841 gcgatgcggt aggggttgcg gcgcagcagc gtccggtcct tgaacgaccc tggctcgccc
      901 tcggaggcgt tgacgaccac cgtgggccgg gggtcggcgg gctcgttgcc caccaccgcc
      961 gcccacttcc gcccggtggg gaagccggcg ccgccccggc cccgcagccc cgaggcggtg
     1021 atctcctcga tggtggccgc cggtccgagc ttgcgggcgg cgtcgaggcc ttttccgccg
     1081 ccggcggcga tgtaggcgtc cagggtgggg acgggttccg gatcgagcac gcgcgtcaag
     1141 atcgccatgt cccttcgact accgcgccgg tcgccctggc aaacccgacc agggtcaccg
     1201 tccgggtccc gcgggtaggg gtcccgtcac gaaccgtccg acccagagga ggcgttggca
     1261 tgggaacgaa gcagcccgag gagccgaagg agacgacgtc caccggtacc ggcgcgtcag
     1321 aggacaccgg cgccgacgtc gacgacgccc gcaaggccgg gatgcggccg accggttccg
     1381 gcggcagcgc gccgccgtcc gagaaccgct gagaacgaga ggggtcgcgg ccggtaacgt
     1441 ccggccgtgc ccgcccggac gtcggccgtc gacctgccga accagtggta cgtcgcctgc
     1501 ctcggttcgg agctcggggg ccggcgcccg gtggcccgga tcgtgcacga ccggccgctg
     1561 tgcctcttcc gcgacgccag cggccggccc gcggcggtcc tggatcgctg tccccaccgc
     1621 aacgttccct tgtcgctcgg ccggctgcgg gacgggttgc tggagtgccg ctatcacggc
     1681 tggcgcttcg ataggaccgg tgcctgccgc gccgtccccg ggctgtgccc ggcggacggc
     1741 gacggcgacg ccgggcggcg ggggagggcc gccgagtcgg tgccctgtgc cgagcaggac
     1801 ggcttcgtct gggtcttccc cggctccggg gcaccgcccc ccggcgggcc ggcgttccgc
     1861 ttcccctgcg tcgatgcgcc gggctacgac acggtgcgcc gctcgttgcg gacggcgggg
     1921 acggtgcacg ccgtggccga gaacgccctc gacgtccccc acacggcctt tctccacggc
     1981 ggcctcttcc ggggcgccgg ccgggacccg gtggagatcg acgtcgtggt gcggacggcg
     2041 gccgaccgca tcgaggccga gtacgtcggc gagccccggc cgcccggtct ggccggccg
//
LOCUS       DATGJT010000210         3681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1376379, whole genome shotgun sequence.
ACCESSION   DATGJT010000210 DATGJT010000000
VERSION     DATGJT010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376379"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..775
                     /locus_tag="VKX24_03595"
     CDS             266..775
                     /locus_tag="VKX24_03595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07593.1"
                     /translation="MDVMHDAEGDLDGDDLADAEHSRWERHVESLRRRRRLRRRLAAV
                     LAVAGIVAIIVGLSWHPGRHADGTGHRQSQPVTVNGAVTDNTAKAPTTGPGGVGADPV
                     KTGLPAVPDGGRVRTGTKAEGCFDTMREYLDAWDRTGVEPDPCFTTQAPAGQPQPSGV
                     VRSYNGQKF"
     gene            845..1495
                     /locus_tag="VKX24_03600"
     CDS             845..1495
                     /locus_tag="VKX24_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07594.1"
                     /translation="MAPPDAARRRPARSLLIATALAAAATGLAACSHGGSGSDAATKG
                     RPAASTQPASTTQAGAEPCTFSGATAAAQGAAGSPTRLLTDVRVGVHDCYERVTFEFK
                     PRTGDAAGPVAWKAAYEPGPVTEDASGRTVPVKGGAFLVVHFSAQGADLTKPDAPDTY
                     TGPTSLEAAGATRIQQVRRTGDFEGVLTWVIGVDRQRPFHVGTQDDPARVVVDVGD"
     gene            1585..2664
                     /locus_tag="VKX24_03605"
     CDS             1585..2664
                     /locus_tag="VKX24_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011000070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HLJ07595.1"
                     /translation="MGRRASFVLTAEEREVLERWARRPKSAQALALRCRIVLAAAEGE
                     NTIDIAARLGCSRGTVSKWRGRFAVLGLDGLHDEPRPGKPRTITDEDVERVIVKTLEE
                     KPASATHWSTRSMAAATGMSQTAVSRIWRAFGLKPHQVETFKLSPDPQFIDKVRDIVG
                     LYLNPPEAAVVLCVDEKSQIQALDRTAPVLPLMPGVAERRTHDYVRNGTTNLYAALNV
                     ASGQVIADMTARHRAEEFRRFLNLIDKNVPAHLDVHVVLDNSSTHKTPSIQRWLLRHP
                     RFTLHFTPTYSSWLNLVERWFAELTTKWIKRGTHRSVRELVASIRTWIAGWNDNPRPY
                     VWHKTADEILDSLAAYCARINDSGH"
     gene            complement(2661..3527)
                     /locus_tag="VKX24_03610"
     CDS             complement(2661..3527)
                     /locus_tag="VKX24_03610"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HLJ07596.1"
                     /translation="MKARPLGPDDAEALCVLVDRDRLPGQPECTPDRVRTALAGRSST
                     DPWWWRELATMRTVGVEGPDGALVGAGAVGRRRSGDRYLLWLHAGEAPEVVEAVLWPL
                     LRGVRRGDPIFAFWSATELSVGLEGLPKGHRPATHEALLARGFTGHDRWLYLVAPADG
                     PPPEVPFRRRGLGSEIRVELDVDGCAVGGAELSVPAPGTGVIWWLEIEPQHRRRGLGR
                     QLLRAARSVLAEEGVGDVVLFVDHDDPRARDRRPALELYQAEGFTVVDHLWSYRRGEG
                     EAEPGGGRPVDL"
BASE COUNT          537 a         1446 c         1263 g          435 t
ORIGIN      
        1 ggccgcctgc gccagccggc gcccggcacc atctgatccg cccccacccc gccccgacag
       61 agcctctccg accggggcgc tgaccgagga cgcgttcgcg ggtgtttcgg ccgatttgcg
      121 ccggtggccg ccgccagcgc cgacagggct cgcccgccca cttctcgaag agggtcccgg
      181 tgcggacggg tggaggtgcc agaatgtggc cacccgccgg ccgcggcccc cgaccgtggt
      241 tgccgaggga gtggagcgaa ggctgatgga tgtgatgcac gacgccgaag gcgacctcga
      301 cggcgacgac ctcgccgacg ccgagcactc ccggtgggag cggcacgtcg agagcctccg
      361 acgccgccgg cgtctccggc gccggctggc cgccgtcctc gccgtggccg gcatcgtggc
      421 catcatcgtc gggctgagct ggcatcccgg ccggcacgcc gacggcaccg gccaccgcca
      481 gtcgcagccc gtcacggtca acggcgccgt caccgacaac accgccaagg cgcccacgac
      541 cgggcccggc ggcgtggggg ccgacccggt caagaccggc ctcccggccg tgcccgacgg
      601 cggccgggtg cggacgggga cgaaggcgga gggctgcttc gacaccatgc gggagtacct
      661 cgacgcctgg gacaggacgg gcgtcgagcc cgacccctgc ttcacgaccc aggctccggc
      721 gggccagccg cagccgagcg gcgtcgtccg cagctacaac ggccagaagt tctgaccgtt
      781 ccggccccgc cgggccggtt cggattgccg catccgcggc cccacccggc ggtaccgtcg
      841 gtgcatggca ccccctgacg cggcgcgacg ccgcccggcc cggagtctcc tgatcgccac
      901 ggcgctggcc gcggcggcca cggggctcgc cgcctgcagc cacggcggct ccggcagcga
      961 tgccgccacc aagggccgcc cggccgcatc gacgcagccg gcgtcgacca cccaggccgg
     1021 cgccgaaccc tgcacgttct ccggcgccac cgccgccgcc cagggcgccg ccggctcgcc
     1081 cacccggctc ctcaccgacg tgcgcgtcgg cgtccacgac tgctacgagc gggtcacctt
     1141 cgagttcaag ccccgcaccg gcgatgccgc cgggcccgtg gcctggaagg ccgcctacga
     1201 gcccggcccg gtcaccgagg acgcctccgg ccgcaccgtc ccggtcaagg gcggcgcctt
     1261 cctcgtcgtc cacttcagcg cccagggcgc cgacctcacc aagcccgacg cccccgacac
     1321 ctacaccggg ccgacatctc tcgaggcggc cggggctacc cggatccagc aggtccgccg
     1381 gacgggcgat ttcgagggcg tcctgacctg ggtcatcggc gtcgaccggc agcggccctt
     1441 ccacgtcggc acccaggacg acccggcccg ggtggtggtc gacgtcggcg actagtgatc
     1501 cgagtcgtta gttcgtagaa accttgcagg agtgcgctgt cgggtcgcga attccttcgt
     1561 catcgacgac gatggagggc agcgatggga cggcgagcga gtttcgtgtt gacggctgag
     1621 gaacgggagg tgctcgaacg gtgggcgcgt cgccccaaga gcgcgcaggc gttggccctg
     1681 cggtgccgga tcgtcctggc cgcggccgag ggtgagaaca cgatcgacat cgcggctcga
     1741 ctgggctgta gccgggggac ggtgagcaag tggcggggcc gattcgctgt gctcggcctg
     1801 gacggcctgc acgacgagcc ccggccgggg aagccgcgca ccatcaccga cgaggacgtg
     1861 gagcgggtga tcgtcaagac gctcgaggag aagccggcca gcgccacgca ctggtcgacg
     1921 cggtcgatgg cagccgccac ggggatgagc cagacggcgg tgagccggat ctggcgcgct
     1981 tttggcctta agccccacca ggtcgagacc ttcaaactgt cgcccgaccc gcagttcatc
     2041 gacaaggtcc gtgacatcgt cggtctctac ctgaacccac cggaggcggc agtcgtcctg
     2101 tgcgtggacg agaaatccca gatccaggcc ttggaccgca ccgcgccggt gctgcccctg
     2161 atgcccgggg tggccgagcg ccggacccac gactacgtcc gcaacgggac caccaacctc
     2221 tacgccgccc tgaacgtggc ctccggccag gtcatcgccg acatgaccgc ccggcaccgc
     2281 gccgaggagt tccgccgctt cttgaacctg atcgacaaga acgtcccggc ccacctcgac
     2341 gtgcacgtcg tgctcgacaa ctcctcgacg cacaagacgc cctcgatcca gcggtggctg
     2401 ctgcgccacc cccgcttcac cctgcacttc accccgacct acagctcctg gctcaacctc
     2461 gtcgagcgct ggttcgccga gctcaccacc aaatggatca agcgcggcac ccaccgctcg
     2521 gtccgagagc tcgtcgcctc catccgcacc tggatcgccg gctggaacga caacccccgc
     2581 ccctacgtct ggcacaagac cgccgacgaa atcctcgaca gcctcgccgc ctactgcgcg
     2641 cgaatcaacg actcgggtca ctagaggtcg acgggccggc cgccgcccgg ctcggcctcg
     2701 ccctcccccc gccggtagga ccacaggtgg tcgacgacgg tgaacccctc ggcctggtac
     2761 agctccagcg ccggccggcg gtcccgggcc ctcgggtcgt cgtggtcgac gaagaggacg
     2821 acgtcgccca ccccctcctc ggccagcacc gaccgggcgg cccgcagcag ctgacgcccg
     2881 aggccccggc ggcggtgctg gggctcgatc tccagccacc agatcacccc ggtcccggga
     2941 gcggggacgc tgagctcggc gccgcccacc gcgcacccgt caacgtcgag ctccacccgg
     3001 atctccgagc cgagcccccg gcggcggaac ggcacctccg gcggcggccc gtccgccggg
     3061 gcgacgaggt agagccagcg gtcgtgcccg gtgaagcccc gggccagcag cgcctcgtgg
     3121 gtggccggcc ggtggccttt cggcagcccc tcgagaccca ccgacagctc ggtggccgac
     3181 cagaaggcga agatcggatc gccgcgccgc acgccccgca gcagcggcca cagcaccgcc
     3241 tcgacgacct cgggggcctc gccggcgtgg agccacagga ggtagcggtc cccgctgcgg
     3301 cgccgcccga cggcgccggc cccgacgagc gcgccgtcgg ggccctcgac ccccaccgtc
     3361 cgcatggtgg ccagctcccg ccaccaccag gggtcggtgc tcgaccgccc ggccagcgcc
     3421 gtacggaccc ggtcgggcgt gcactcgggc tggccgggga gccggtcgcg gtcgaccagg
     3481 acgcacagag cctcggcgtc gtcgggcccc agcgggcggg ccttcaccgg aggtcgagca
     3541 cgaccttccc gaacgtccgg tcggcggcca ccaggtcgta gccccgctcg gcctcggcca
     3601 gcgggacgac ggcgtcgatc accggccgga cagcgccccg ggccagcagc ggcacgacct
     3661 gaccctcgaa caggtgcgtg g
//
LOCUS       DATGJT010000211         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_340649, whole genome shotgun sequence.
ACCESSION   DATGJT010000211 DATGJT010000000
VERSION     DATGJT010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340649"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2182)
                     /locus_tag="VKX24_03615"
     CDS             complement(<1..>2182)
                     /locus_tag="VKX24_03615"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ07597.1"
                     /translation="EPVRGYMERRAMGAGEEIARQEGEPQSFGEAWRTVWAVRTLRRQ
                     FIAAVVATPGATVYALLLPFLLVDQYGLRSATERFAALAPASFVAGLLGAFVGGALID
                     RLSAINPSRVLVVVGVFGLVGALGLLGTATLPPLWLLVGFSALLTFGYALVGPAAQAI
                     TTQIIPPVVRTQGVQMLGLAAIPGLIFFVPMAGMLRTQYGYSAAILFCVPFAVVGALV
                     NLSAASFFEFDRRNAFAAAMADADWREAKAAGRGKLLVCRDVDVDYDGVQVLFGVDFD
                     VEEGQIIALLGTNGAGKSTLLRAISGTQEASAGAIVFDGRDITHMPPHETAARGVIHM
                     PGGRGIFPGLTVRENVLLGTWLADGSAVDRSARLREVFDIFPILRERADETAASLSGG
                     EQQMLSLAQAFLAEPRLLMIDELSLGLSPAMVGRLLDVVRRIHARGTTIIVVEQSVNV
                     ALTLAEKAIFMEKGEVKFFGATADLLARPDILRAVYVKGTGALTGGAPASALRSERER
                     RALGLGEARPVLEVEHLTKRFGGITAVDDLSFALREGEVLGVIGPNGSGKTTTFDLIS
                     GFQLPDGGAVRYQGVNITALPPEERARRKLVRRFQDARLFPSLTVFETLLVALDQRLE
                     VRSALLAAAQLPQARRAEKRVRLRAEKLIELLELGAYRDKFVKELSTGLRRIVDLACV
                     LATEPQVLLLDEPSSGIAQAEAEGLAPLLRRVRFETGCSILVIEH"
BASE COUNT          335 a          784 c          794 g          269 t
ORIGIN      
        1 cgtgttcgat gacgaggatc gagcaccccg tctcgaaccg gacgcggcgc agcaggggcg
       61 ccagcccttc ggcctcggcc tgggcgatcc cggagctggg ctcgtcgagc aggagcacct
      121 gcggctcggt ggccaggaca caggccaggt cgacgatgcg ccgcagcccg gtcgagagct
      181 ccttcacgaa cttgtcgcgg taggcgccga gctccagcag ctcgatcagc ttctcggccc
      241 gcagccggac ccgcttctcg gcccgccggg cctgcggcag ctgggccgcc gccagcaggg
      301 cgctgcggac ctcgagccgc tggtccagcg ccaccagcag cgtctcgaag acggtgagcg
      361 acgggaacag gcgggcgtcc tggaagcggc gcaccagctt gcgccgggcc cgttcctccg
      421 gcggcagggc ggtgatgttg acgccctggt agcggacggc gccgccgtcg ggcagctgga
      481 atccggagat caggtcgaac gtcgtcgtct ttcccgatcc gttggggccg atcacgccca
      541 gcacctcgcc ttcccggagg gcgaagctca gatcgtcgac cgccgtgatg ccgccgaagc
      601 gcttggtgag gtgctccact tcgaggaccg ggcgggcctc gccgagcccc agcgcccggc
      661 gttcccgctc ggagcgcagc gccgaggccg gcgcgccgcc ggtcaaggcg cccgtcccct
      721 tgacgtagac ggcccggagg atgtcgggcc gggccagcag gtcggcggtg gcgccgaaga
      781 acttgacctc gcccttctcc atgaagatgg ccttctcggc cagcgtgagg gcgacgttga
      841 ccgactgctc gacgacgatg atcgtcgtgc cccgggcgtg gatccgccgc acgacgtcga
      901 gcagccggcc gaccatcgcg ggcgagaggc cgagcgacag ctcgtcgatc atcagcagcc
      961 ggggctcggc caggaatgcc tgcgccagcg acagcatctg ctgctcgccg cccgacagcg
     1021 acgccgccgt ctcgtcggcc cgctcccgca ggatcgggaa gatgtcgaac acctcccgga
     1081 ggcgggcgga ccggtccacc gcgctgccat cggcgagcca ggtgccgagc aggacgttct
     1141 cccgcacggt gaggccgggg aagatgcccc gcccgccggg catgtggatc acaccgcggg
     1201 cggcggtctc gtggggcggc atgtgggtga tgtcccggcc gtcgaacacg atggcgccgg
     1261 ccgacgcctc ctgcgtgccg ctgatggccc gcagtagcgt cgacttgccg gcgccgttgg
     1321 taccgagcag ggcgatgatc tggccctcct cgacgtcgaa gtccacgccg aagagcacct
     1381 gcacgccgtc gtagtcgacg tcgacgtccc ggcagacgag cagctttccc cggccggcgg
     1441 ccttggcctc ccgccagtcg gcgtcggcca tggcggcggc gaaggcgttg cggcggtcga
     1501 actcgaagaa cgacgccgcc gacaggttca ccagcgcccc gaccacggcg aagggaacgc
     1561 agaagaggat ggcggcgctg tagccgtact gcgtccggag catcccggcc atgggaacga
     1621 agaagatcag accggggatg gcggccagcc cgagcatctg gacgccctgg gtccgcacca
     1681 ccggcgggat gatctgggtc gtgatcgcct gggcggccgg cccgacgagg gcgtagccga
     1741 acgtcagcag ggcgctgaag cccaccagca gccacagcgg cggcagtgtc gccgtcccga
     1801 ggagcccgag ggcaccgacg agcccgaaca ccccgaccac caccagcacc cgcgacgggt
     1861 tgatggccga gagccggtcg atcagcgctc cgccgacgaa ggcgccgagg aggccggcca
     1921 cgaacgacgc cggggccagg gcggcgaagc gctccgtggc gctgcgcagc ccgtactggt
     1981 cgacgaggag gaacggcagc agcagggcgt agacggtggc gccgggggtg gcgacgacgg
     2041 cggcgatgaa ctgccgccgc agcgtccgga cggcccacac cgtccgccac gcctcgccga
     2101 acgactgcgg ttcgccttcc tggcgagcga tctcctcgcc ggcgcccatg gcccggcgct
     2161 ccatgtagcc ccgcaccggt tc
//
LOCUS       DATGJT010000212         2501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1273465, whole genome shotgun sequence.
ACCESSION   DATGJT010000212 DATGJT010000000
VERSION     DATGJT010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1273465"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VKX24_03620"
     CDS             complement(<1..753)
                     /locus_tag="VKX24_03620"
                     /inference="COORDINATES: protein motif:HMM:NF018604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family protein"
                     /protein_id="HLJ07598.1"
                     /translation="MDDVGAATSAGPGEKALLAVVLAAVAGFVDVVGYLALFGIFTAH
                     MSGNSAAFGAAAGRGLVSEVALRGLPILFFVVGVAVAGAVIELLTRGGARSPTAVALS
                     AEVVCLVALMAYAGFGAGVEPRRGTVGFFVLVALAVGAMAIQTATLRRVGGRTVRTTY
                     VTGMLTRLAEGIVNYAFLRLDIRQGRIGAADGRLRLRSARSRILLLAGIWGAYAGGGV
                     LGAVLDGRFRLRSLAVPVAVLVVVVLADVAHPV"
     gene            864..1859
                     /locus_tag="VKX24_03625"
     CDS             864..1859
                     /locus_tag="VKX24_03625"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HLJ07599.1"
                     /translation="MTSHDGGTEPHPPNLYERTLERVDRFQRTRPWLAFPVAVLKKSG
                     DDRASRLAALVSYYGFFSLFPLLLILVTGLGFVLSGHEALRQRILDAALGQFPGLAGQ
                     IQAGVGSLRGNGFGLAVGLVGLLWAGIGVMASLQDAMNTVWDVPLKVQPNFWEKRVRA
                     LAMLALLGVAFLVTSFLTIVGRIPALAGFGGGGLVVSFVIDLPLFLLAFRVLTDRDLP
                     WAAFLPGAAVGAVGWVFLQWLGGYYVDHVISGASRTYGFFAVVIGLLSWMYLLAQWVI
                     LAAEVNVVRHDHLWPRTFFGNALRARDREALIREVEAAARRREQVVSVHFDNRAR"
     gene            1885..>2501
                     /locus_tag="VKX24_03630"
     CDS             1885..>2501
                     /locus_tag="VKX24_03630"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ07600.1"
                     /translation="MSGILHRPVERVTVALGGPSKAATVALLAAVLALDSADKGAVGV
                     LAPSLKSAFSLSNTDIGLLSSVVSIVGAAATLPAGVLTDRIRRTGLLAVSVATWAVAM
                     ALSGFAVSFLMLVLTRVFLGAVTATSGPTASSLTGDLYPPRRRGGVLAWIDSGELVGL
                     GVGYLLVGAVIAVLSWRWVFGILGVVGAALVVPLWRLPEPPRGSC"
BASE COUNT          292 a          942 c          908 g          359 t
ORIGIN      
        1 gacggggtgg gcgacgtcgg cgaggacgac cacgacgagg acggcgacgg ggacggccag
       61 cgagcggagc cggaaccggc cgtcgagcac ggcgccgagg acgccgccgc cggcgtaggc
      121 gccccagatc ccggccagca acaggatccg gctccgggcg gagcgcagcc gcagtcgccc
      181 gtccgccgcg ccgatccggc cctggcggat gtcgagccgc aggaaggcgt agttcacgat
      241 gccctcggcc aggcgggtca gcatgccggt gacgtacgtc gtccgcaccg tccggccgcc
      301 gacccggcgg agcgtcgccg tctggatggc catggccccg acggccaggg cgaccagcac
      361 gaagaacccc accgtccccc gccggggttc gactccggcg ccgaagccgg cgtaggccat
      421 gagcgccacc aggcacacga cctcggcgct cagcgccacc gccgtcgggg agcgcgcccc
      481 gccccgggtc aggagctcga tgaccgcccc ggccaccgcc accccgacga cgaagaacag
      541 gatcggcagg ccccggaggg cgacctcgga gacgagcccc cggccggcgg cggcgccgaa
      601 ggcggcgctg ttgccgctca tgtgggcggt gaagatcccg aacagcgcca ggtagccgac
      661 gacgtcgacg aaccccgcca cggcggccag gaccacggcg aggagggcct tctcccccgg
      721 cccggcgctc gtcgccgccc cgacgtcgtc cactcccccg gactacccca cggcccgtcc
      781 ggcgtaccgg gtgcaggggg acgaccgccc cgcgggtttc ggcctggacc gtccggggca
      841 gccacaggct gaggaccgac gccatgacca gccacgacgg cgggacggaa ccgcaccccc
      901 cgaacctcta cgagcggact ctggagcgcg tcgaccggtt ccagcggacc cggccctggc
      961 tggccttccc ggtggcggtg ctcaagaagt cgggggatga ccgggcctcc cgcctcgccg
     1021 ccctcgtctc ctactacggc ttcttctcgc tcttcccatt gctgctgatc ctcgtgaccg
     1081 gactggggtt cgtcctctcg ggccacgagg cgctccggca gcggatcctc gacgccgcgc
     1141 tcggccagtt cccgggtctg gcgggccaga tccaggccgg tgtcggttcg ctgcggggca
     1201 acgggttcgg cctcgccgtg ggcctcgtcg ggctgctgtg ggccgggatc ggcgtcatgg
     1261 cctcgctcca ggacgccatg aacaccgtct gggacgtgcc gctcaaggtg cagcccaact
     1321 tctgggagaa gcgggtgcgg gcgctggcca tgctggccct gctcggcgtg gccttcctgg
     1381 tgacgtcgtt cctcaccatc gtcgggcgga tcccggcgct ggccgggttc ggcggcggcg
     1441 gtctcgtcgt ctcgttcgtc atcgacctgc cgctgttcct gctggccttc cgggtgctga
     1501 ccgaccggga cctgccctgg gcggcgtttc tgcccggggc ggcggtcggc gccgtcggct
     1561 gggtgttcct gcagtggctc ggcgggtact acgtcgacca cgtcatctcc ggcgccagcc
     1621 gcacgtacgg gttcttcgcc gtggtcatcg gtctcctgtc gtggatgtac ctgctggccc
     1681 agtgggtgat cctcgccgcc gaggtcaacg tggtgcgcca cgaccacctg tggccccgca
     1741 cgttcttcgg caacgccctg cgggcccgcg accgggaggc gctcatccgg gaggtcgagg
     1801 cggccgcccg ccggcgggag caggtcgtca gcgtccactt cgacaaccgg gcccgctgac
     1861 cgggccgccg gcgtggccag gccgatgagc ggcatcctcc accggccggt ggagcgcgtc
     1921 accgtcgccc tcggcggccc ctccaaggcc gcgaccgtgg ccctgctggc cgccgtcctg
     1981 gccctcgaca gcgccgacaa aggggcggtc ggcgtcctcg ccccgagcct caagtcggcc
     2041 ttctcgctca gcaacaccga catcggcctg ctgtcgtcgg tggtgagcat cgtcggggcg
     2101 gcggccacgc tgccggccgg ggttctgacc gaccggatcc gccgcacggg cctgctggcc
     2161 gtcagcgtgg cgacctgggc ggtggccatg gccctgtcgg gcttcgccgt gtcgttcctc
     2221 atgctggtgc tcacccgcgt gttcctcggc gccgtcaccg ccacgtcggg cccaacggcg
     2281 tcgtcgttga ccggcgacct gtacccgccc cgccggcgag gcggggtgct cgcctggatc
     2341 gacagcggcg agctcgtcgg gctcggggtc ggctacctcc tggtcggcgc ggtcatcgcc
     2401 gtgctgtcgt ggcggtgggt cttcggcatc ctcggggtcg tcggggcggc gctggtcgtg
     2461 cccctgtggc gattgccgga gccgccccgg ggcagctgcc a
//
LOCUS       DATGJT010000213         4599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_28557, whole genome shotgun sequence.
ACCESSION   DATGJT010000213 DATGJT010000000
VERSION     DATGJT010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4599
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28557"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..1399)
                     /locus_tag="VKX24_03635"
     CDS             complement(20..1399)
                     /locus_tag="VKX24_03635"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HLJ07601.1"
                     /translation="MAEPGVSDGDELTALVRKIAGEARPGEQVEAYASRSQGMEVKVF
                     GGEVESLASESIEGVGVRVVVDGRQGFAWAGSLEPDVVAETLAEARDNAGFGSPDEFL
                     GLPGPDEAAEPGSGRAALDLWREGLLVTPADDKVALALELERAVMAADPRIRGVRTVS
                     YGDGAGQMALANSLGVEAASRRTVCSISALTLAGEGVGTRTGYGFSVGREPSELDVAE
                     AAAMAVDRAVRLLGATQPRSRRLPVVFDPLVAASILGVIAGALNGESVLKGRSMFATR
                     LGEMVAAPHLSIVDDPTNPEAFGAAGYDSEGVPTRPVRLIENGTLGRFLHNVQTGRRS
                     GSGTTGSAVRAGYTSTPGVGSRALHFEPGPAPPEELLRRAEGGLFVQAVTGLHSGASP
                     VTGDFSVGADGLIIRDGVLAEPVREVTVASTFQRMLLDLEVGNDLQWLAGGAAGITLL
                     VPEMTMSGS"
     gene            complement(1392..2783)
                     /locus_tag="VKX24_03640"
     CDS             complement(1392..2783)
                     /locus_tag="VKX24_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HLJ07602.1"
                     /translation="MIEESVLQRVLHAALQSGGEFAEVYVEDRRNAGARLDDGKIEEF
                     TAGRERGAGVRVVSGAATGYAHTSDLSERALTEAARAAGAAARGAESRTTVVALQRRD
                     GAPTHPVRELPETVEKLRKADVLRRADDAARSAGGAIRQVSAAYADSRKRIVIANSDG
                     LLVSDDRVRTRFVVSCTALGDGGLQSGFEGPGRTVGFELFDDFDPEEVARTAAGRALR
                     MLDARPAPVGKLPVVLRQGAGGVLFHEACGHGLEADLVTRNASVFRDRLGTQVASPLV
                     TLVDDGTFDRGWGTLSVDDEGHPARRNTLIENGVLSDYMWDLLRARKEGRESSGNGRR
                     ETYQSLPMVRMTNTYLLAGADDPDDIIASTPYGLYCAALGGGQVNTATGDFVFGVTEA
                     YLIENGRLTAPVRAANLIGNGPETLLGIDAVGTDFDTWAGTCGKDGQGVPVSAGQPTV
                     RVAEMTVGGTAGG"
     gene            2866..3252
                     /locus_tag="VKX24_03645"
     CDS             2866..3252
                     /locus_tag="VKX24_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HLJ07603.1"
                     /translation="MELQPGSAASVERVVGERDTSAAAGTSDVAMLATPSIILFAEQA
                     IWAALDGRLDKGTSAVEHRVEISHLAPTPVGAKVRAEAILETIEGRRLVFRISVTDER
                     GLVAAGRFTRVIVAKDKFLERAGLED"
     gene            complement(3269..>4599)
                     /locus_tag="VKX24_03650"
     CDS             complement(3269..>4599)
                     /locus_tag="VKX24_03650"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF004516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetolactate synthase"
                     /protein_id="HLJ07604.1"
                     /translation="GSLQEVDHVPIVAEVTKRAVTAHKTADIGVEVASALMAATTAPR
                     GPCFVDIPVDQFFDKAPAEGTWRVTADDGAWTDRDPDSDGLAEVAKLIAAAERPVIMA
                     GGGVYWDGAEAALEELAEAAGAPVLMNGLGRGTLRASHLLAFSRARSVALRRADLVVA
                     AGVPLDFRLGFGRFGGGARVVHLVEHPSMVATHVELAGSAAGDLSEVFRGIAAAGVEA
                     SHGKERAEWLADLSAEETARREQEEETLRSGNDPIHPARIYGELRDRLEPDAVVVVDG
                     GDFGSYAGKLIDSETPGSFLDPGPYGCLGTGPGYGLAARLAAVAEGRPDRQVFILLGD
                     GAAGFSLMDFDTLVRHEAPVVAIVGNNGIWGLEKHPMQALYGYDVVAELRPGTRYDEV
                     VTALGGHGELVTDPAEIGPAIDRALAAGVPALVNVLTDPADVYPRSSALM"
BASE COUNT          594 a         1753 c         1671 g          581 t
ORIGIN      
        1 agactctacc gccgggcggc tacgaaccgc tcatggtcat ctcgggcacc aggagcgtga
       61 tccccgccgc gccgccggcc agccactgca ggtcgttgcc gacctcgagg tcgagcagca
      121 tccgctggaa ggtcgacgcc acggtcacct cccggacggg ttcggcgagg acgccgtcgc
      181 ggatgatcag cccgtcggcg ccgacggaga agtcgccggt gaccgggctg gcgcccgagt
      241 gcaggccggt gacggcctgc acgaagaggc cgccctcggc ccggcgcaac agctcctccg
      301 gcggcgccgg gcccggctcg aagtgcagcg cccgggaccc gacgccgggc gtcgacgtgt
      361 agccggcccg caccgccgac cccgtcgtgc cgctcccgct gcgccggccg gtctggacgt
      421 tgtggaggaa ccggccgagc gtgccgttct cgatgaggcg gacgggccgg gtcggcacgc
      481 cctcgctgtc gtagccggcg gcgccgaagg cctcggggtt ggtcgggtcg tcgacgatcg
      541 acaagtgggg cgcggccacc atctcgccca gccgggtggc gaacatggag cggcccttca
      601 ggacggattc gccgttgagg gcgccggcga tgaccccgag gatcgacgcc gccaccagcg
      661 ggtcgaacac caccggcagc cgccggctcc tcggctgcgt cgcccccagc aggcggacgg
      721 cccggtcgac ggccatcgcc gccgcttcgg ccacgtcgag ctccgagggc tcccgcccga
      781 ccgagaagcc gtagccggtg cgggtgccga cgccctcgcc ggccagcgtc agggcggaga
      841 tcgagcagac ggtgcgccgg gacgccgcct cgacgccgag cgagttggcc agcgccatct
      901 ggccggcgcc gtctccgtag gagacggtgc gcacgccccg gatccgggga tcggcggcca
      961 tcaccgcccg ctccaactcc agggccaagg ccaccttgtc gtcggccggc gtgacgagaa
     1021 ggccttcccg ccacagatcc agagccgccc ggccggagcc gggctcggcc gcctcgtcag
     1081 ggccgggcag gccgaggaat tcgtcgggcg aaccgaagcc ggcgttgtcg cgggcctcgg
     1141 ccagcgtctc ggccaccacg tcgggctcca gcgatccggc ccaggcgaag ccctgccggc
     1201 cgtcgacgac cacccgcacg ccgacgccct cgatgctctc cgacgccagc gactccacct
     1261 cgccgccgaa gaccttgacc tccatgccct gcgaacggga ggcgtaggcc tcgacctgct
     1321 cgccgggccg ggcctcgccg gcgatcttgc ggacgagcgc cgtcagctcg tccccgtccg
     1381 acacgccggg ctcagccacc ggcggtaccc ccgacggtca tctccgccac ccggacggtc
     1441 ggctggccgg ccgagaccgg cacgccctgc ccgtccttcc cgcaggtgcc ggcccaggtg
     1501 tcgaagtcgg tgccgacggc gtcgatgccg agcagcgtct cgggcccgtt gccgatgagg
     1561 ttggccgccc gcaccggggc ggtgagccgc ccgttctcga tcaggtaggc ctcggtcacg
     1621 ccgaagacga agtcgccggt ggcggtgttg acctgccccc cgccgagggc ggcgcagtag
     1681 aggccgtagg gcgtggaggc gatgatgtcg tcggggtcgt cggcccccgc cagcaggtag
     1741 gtgttggtca tgcggaccat cggcagcgac tggtacgtct cccgccggcc gttgccgctc
     1801 gactcccggc cctccttgcg ggcccggagg agatcccaca tgtagtccga cagcacgccg
     1861 ttctcgatga gcgtgttgcg ccgcgcgggg tggccctcgt cgtcgaccga cagcgtcccc
     1921 cagccccggt cgaacgtgcc gtcgtcgacc agcgtcacca gcggcgaggc gacctgcgtg
     1981 ccgaggcggt ctctgaacac cgatgcgtta cgggtcacga ggtcggcctc gaggccgtgg
     2041 ccgcaggcct cgtggaagag gacgccgccg gcgccctggc gcagcaccac cggcagcttg
     2101 ccgaccgggg cgggccgggc gtcgagcatg cgcagcgccc ggccggcggc ggtgcgggcc
     2161 acctcctcgg gatcgaagtc gtcgaacagt tcgaagccga cggtgcggcc cggcccctcg
     2221 aaccccgact gcagcccgcc gtcgccgagc gccgtgcagc tgaccacgaa ccgggtgcgc
     2281 acccggtcgt cgctcaccag cagcccgtcg gaattggcga tcacgatccg cttgcgggag
     2341 tcggcgtagg cggccgacac ctggcggatg gcgccgccgg ccgagcgggc ggcgtcgtcg
     2401 gcccggcgca ggacgtcggc cttgcggagc ttctccaccg tctcgggcag ctcccggacg
     2461 ggatgggtcg gtgcgccgtc gcgccgctgg agggccacga cggtggtgcg gctctccgct
     2521 ccccgggcgg cggcgccggc ggcccgggcc gcctcggtca gcgcccgctc cgagaggtcg
     2581 gaggtgtggg cgtagccggt cgcggctccc gacacgaccc ggacccccgc gccccgctcc
     2641 cggccggcgg tgaactcctc gatcttgccg tcgtcgaggc gggcgccggc gttgcgccgg
     2701 tcctcgacgt agacctcggc gaactccccg cccgactgca aggcggcgtg cagcacccgc
     2761 tggagcacgg attcctcgat cacggcgatc ccttcgtccg gggggcgacc gggccccggg
     2821 gcgcccgttc cggcggctgt gaccggggcc ttctatggta cggccgtgga gctccaaccg
     2881 ggttcggcag ccagcgtcga acgggttgtc ggcgagcgtg acacgtcggc cgccgccggg
     2941 acctccgacg tcgccatgct ggccaccccg agcatcatcc tcttcgccga acaggcgatc
     3001 tgggccgctc tcgacggccg cctggacaag ggcacgagcg ccgtggagca ccgggtcgag
     3061 atcagccacc tggcgcccac gccggtgggg gccaaggtgc gggcggaggc catcctcgag
     3121 acgatcgagg gccgccggct ggtgttccgg atctcggtca ccgacgagcg gggcctcgtg
     3181 gccgccggcc gcttcacccg ggtcatcgtc gccaaggaca agttcctgga acgggcgggc
     3241 ctcgaagact gacgggcccg tccgccgcct acatcagggc gctcgagcgc ggatacacgt
     3301 cggccgggtc ggtgaggacg ttgaccagcg ccggcacccc ggcggccagg gcgcggtcga
     3361 tggccgggcc gatctccgcc gggtcggtga cgagctcgcc gtgcccgccg agcgccgtga
     3421 cgacctcgtc gtagcgcgtc cccggccgca gctcggccac cacgtcgtag ccgtagagcg
     3481 cctgcatcgg gtgcttctcc aggccccaga tgccgttgtt gccgacgatg gccaccaccg
     3541 gcgcctcgtg gcggacgagg gtgtcgaaat ccatcagcga gaaccccgcc gccccgtcgc
     3601 cgaggaggat aaagacctgc cggtcgggcc gcccttcggc caccgccgcc agccgggcgg
     3661 ccagcccgta gcccggcccg gttccgaggc agccgtaggg cccgggatcg aggaacgagc
     3721 cgggcgtctc gctgtcgatg agcttgccgg cgtaggagcc gaagtcgccg ccgtcgacca
     3781 cgaccacggc gtcgggctcg agccggtcgc gcagctcgcc gtagatccgg gccgggtgga
     3841 tcgggtcgtt gccgctccgg agcgtctcct cctcctgttc ccggcgggcg gtctcctccg
     3901 ccgagagatc ggccagccac tccgcccgct ccttcccgtg cgacgcctcc acaccggcgg
     3961 cggcgatgcc ccggaagact tcggacaggt cgcccgccgc cgacccggcc agctcgacgt
     4021 gggtggccac catcgagggg tgctcgacga ggtgcacgac ccgcgccccg ccgccgaagc
     4081 ggccgaagcc gagccggaag tcgagcggca cgccggcggc gaccaccagg tcggcccggc
     4141 gcagcgccac cgaccgggcc cgggagaagg ccaggaggtg cgaggcccgg agcgtccccc
     4201 ggccgagccc gttcatcagg acgggcgccc cggccgcctc ggccagctcc tcgagcgccg
     4261 cctcggcccc gtcccagtag acgccgccgc cggccatgat caccggccgt tccgcggcgg
     4321 cgatgagctt ggcgacctcg gcgagcccgt cggagtccgg gtcccgatcc gtccaggctc
     4381 cgtcgtcggc ggtgacccgc catgtcccct ccgccggagc cttgtcgaag aactggtcga
     4441 cggggatgtc cacgaagcac ggccctcggg gagcggtggt cgccgccatg agggccgacg
     4501 ccacctcgac cccgatgtcg gcggtcttgt gcgccgtcac cgcccgcttg gtcacctcgg
     4561 ccacgatcgg cacgtggtcg acctcctgca gggagccgg
//
LOCUS       DATGJT010000214         4413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_859249, whole genome shotgun sequence.
ACCESSION   DATGJT010000214 DATGJT010000000
VERSION     DATGJT010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_859249"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VKX24_03655"
     CDS             complement(<1..213)
                     /locus_tag="VKX24_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019058669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HLJ07605.1"
                     /translation="MPAARRSPRIIAGEAGGRRLAVPPGDKIRPTSDRVKESVFAALG
                     PDRLAGARVLDLYAGTGALGLEALSRG"
     gene            complement(225..2375)
                     /gene="recG"
                     /locus_tag="VKX24_03660"
     CDS             complement(225..2375)
                     /gene="recG"
                     /locus_tag="VKX24_03660"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HLJ07606.1"
                     /translation="MGKTLRDLRDVPISRISGVTPRLEERLGMLGIHNVLELIEHYPR
                     RYLDRTKKSDIADLRVGEEATVYAEVRKLSSRRTRQGRALVETIVYDGTSYLYVTFFN
                     QPWRAQQLSVGTEAAFFGKLEHYRGKHQMTNPVVDVLGRIGEKTGVIVPIYPQSGKAD
                     VSTWQLQKFVAEALRRARDFDDPVPDEVIGRLGLVDRTRAYNGIHQPETEADHYRAAR
                     RLIFDEFLRMQLGLVARKRAFEERRIGLTHRVDGPLVPAFHANLPFPLTGDQQRAIAE
                     IAEDLAAPRPMHRLLQGDVGSGKTVVALTALLTAVQGGYQGALMAPTEVLAEQHHLSI
                     SRFLEGLTVASEGTLMGERPVRVELLTNRTGAAGRRRLSAALAAGEVDIVVGTHALIY
                     DTVAFPALGVAVIDEQHRFGVEQRALLRAKGPGGGGPDGGEGPEPDVLVMTATPIPRT
                     AAMLIYGDLDKSELREMPPGRTPITTDVIGPSPLERAGAYQRLRDQVAAGRQAYVVCP
                     LVEGSEKVEAKAATEEAARLEAEELQDLRVGLLHGQMPQADKESTMARFRAGGIDVLV
                     STTVIEVGVDVPNATVMIIEDADRFGLSQLHQLRGRVGRGGGESWCFLFADPQTAEAE
                     ARLEAMAESTDGFLLAERDLEIRGAGEVFGERQAGFTDLKLGRIPRDEPVVLEARRVA
                     EEILDADSGLAAHRRLAEEVEDLLGDDVEFLFKS"
     gene            2447..2635
                     /gene="rpmB"
                     /locus_tag="VKX24_03665"
     CDS             2447..2635
                     /gene="rpmB"
                     /locus_tag="VKX24_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006545176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HLJ07607.1"
                     /translation="MSAVCEVCGKRPRVGMRVSHSHRRTKRRWNPNIQRIRAVVAGAP
                     KRVRVCTSCLKAGKIQKG"
     gene            complement(2607..3455)
                     /gene="thiD"
                     /locus_tag="VKX24_03670"
     CDS             complement(2607..3455)
                     /gene="thiD"
                     /locus_tag="VKX24_03670"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019634809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HLJ07608.1"
                     /translation="MRPPVALTVAGTDSGGGAGIAADLKTFAAHGVWGTFAVTAVTAQ
                     NTLGVAAVEVLRPDIVAAQIGAVAGDFAIAAMKTGMLGDAAVVEAVATAVEEWDLHPL
                     VVDPVAVASAGGALLSPDGLEALRTRLLPLADLVAPNLAEAAALAGLDEVPSDEAGVE
                     RAAAAVLDLGPRGVLLTGGHLPGPESPDLLMWRGPAEEVWTVIGHSPRQLSKRWLPGR
                     RINAPNTHGTGCVLSAAVTARLARGEDLVQAVEGAKEFVTAAIAAGVDLGAGPGAVNP
                     SGSSPP"
     gene            complement(3452..>4413)
                     /gene="thiL"
                     /locus_tag="VKX24_03675"
     CDS             complement(3452..>4413)
                     /gene="thiL"
                     /locus_tag="VKX24_03675"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HLJ07609.1"
                     /translation="RPFPPHATPEALLSGEFAFLERLRLALPEPPSGQVGVGDDTAVL
                     DGGLLFATDVLTEGVHFDLRWSTPADVGWKALAVNLSDIAAMGGAPRAAVCGVVLGAG
                     RKGEADEVAAGLLAAASELGCALVGGDTVVGAALTVTVAVVGDSPGSGAVLRSGARPG
                     DSVFVTGPLGAPKAALAALRRGAEPDPVGLARLQRPVPRLLEGRTAAIAGASAMIDVS
                     DGLSSDLAHLCRASGVGARLEAAAIPAGPGATVDDALSGGDDYELCFTAADPVRVAEA
                     FAAAGLHLPAPIGTVTAGDGVLLSTPGGGSWPLAPSGWEHAVE"
BASE COUNT          576 a         1617 c         1658 g          562 t
ORIGIN      
        1 gccccgcgac agcgcctcca ggcccagggc cccggtgccg gcgtagaggt ccaggacccg
       61 ggcgccggcg agccggtcag gcccgagggc ggcgaagacc gactccttca cccggtcgct
      121 ggtcggccgg atcttgtctc ccggcgggac ggccagccgc cgtccgccgg cctcgccggc
      181 gatgatccgg gggctccgtc gggcggcggg catcggccgg gcgctcagct cttgaagagg
      241 aactcgacgt cgtcgccgag gaggtcctcc acctcctcgg ccagccggcg gtgggcggcc
      301 aggccggagt cggcgtcgag gatctcctcc gccacccgcc gggcctcgag caccaccggc
      361 tcgtcgcggg ggatgcgccc gagcttgagg tcggtgaagc cggcctggcg ctcgccgaac
      421 acctcgcccg cgccccggat ctccaggtcg cgctcggcga ggagaaagcc gtcggtggat
      481 tcggccatcg cctcgaggcg ggcctcggcc tctgccgtct gggggtcggc gaacaggaag
      541 caccacgact cgccaccgcc ccgcccgacc cggccccgca gctggtggag ctgggacagc
      601 ccgaagcggt cagcgtcctc gatgatcatg accgtggcat tcgggacgtc gacgccgacc
      661 tcgatgacgg tggtcgagac cagcacgtcg atgccgccgg cgcggaagcg ggccatcgtc
      721 gactccttgt cggcctgggg catctggccg tggagcaggc cgacccttaa gtcctggagc
      781 tcctcggcct cgagccgggc cgcctcctcg gtggccgcct tggcctcgac cttctccgac
      841 ccctccacca gcgggcagac gacgtaggcc tgccggccgg cggccacctg gtcgcgcagc
      901 cgctggtagg cgccggcccg ctccaacggc gaggggccga tgacgtcagt ggtgatcggg
      961 gtgcggccgg gcggcatctc ccgcagctcc gacttgtcga ggtcgccgta gatgagcatg
     1021 gccgccgtcc tcgggatggg cgtggcggtc atgacgagga cgtcgggctc gggcccctcg
     1081 ccaccgtcgg ggcccccgcc gcccgggccc ttcgcccgca gcagcgcccg ctgctccacg
     1141 ccgaagcggt gctgctcgtc gatcacggcc acgccgaggg ccgggaaggc gacggtgtcg
     1201 tagatcaggg cgtgggtccc cacgacgatg tcgacctcgc cggcggcgag ggcggccgag
     1261 agcctgcgcc ggccggcggc gcccgtccgg ttggtgagga gctcgacccg gacggggcgc
     1321 tcccccatca gcgtcccctc cgaggcgacg gtcaggccct cgaggaagcg ggagatgctc
     1381 aggtggtgct gctcggccag cacctcggtc ggcgccatca gcgccccctg gtagccgccc
     1441 tggacggcgg tcaggagagc ggtgagggcg acgacggtct tgcccgagcc gacgtcgccc
     1501 tgcaggaggc ggtgcatcgg ccggggggcg gcgaggtcct cggcgatctc ggcgatggcc
     1561 cgctgctggt cgccggtgag cgggaacggc aggttggcgt ggaaggccgg caccagcggc
     1621 ccgtccaccc gatgggtcag cccgatccgg cgctcctcga aggcccgttt gcgggccacg
     1681 agcccgagct gcattcggag gaactcgtcg aagatgaggc gccgggcagc ccggtagtgg
     1741 tcggcctcgg tctcgggctg gtggatgccg ttgtaggccc gggtgcggtc gacgagcccg
     1801 agccggccga tcacctcgtc ggggacgggg tcgtcgaagt cgcgggcccg ccggagcgcc
     1861 tcggcgacga acttctggag ctgccaggtg gagacgtcgg ccttccccga ctgggggtag
     1921 atcggcacga tgacgccggt cttctcgccg atgcgcccca ggacgtcgac gaccgggttc
     1981 gtcatctggt gcttgccccg gtagtgctcg agcttcccga agaacgccgc ctcggtcccg
     2041 acgctgagct gctgcgcccg ccacggctgg ttgaagaacg tgacgtagag gtacgacgtg
     2101 ccgtcgtaga cgatggtctc gaccagggcc cggccctggc gggtccgccg cgacgagagc
     2161 ttgcggacct cggcgtagac ggtggcctcc tcccccaccc ggaggtcggc gatgtcggac
     2221 ttcttcgtcc ggtcgaggta ccggcggggg tagtgctcga tgagctccag cacgttgtgg
     2281 atcccgagca ttccgagccg ttcctcgagg cgcggcgtga cgccggagat ccgcgagatc
     2341 gggacgtccc gcaggtcgcg cagcgtcttg cccactgccg ggcgagcgta tcggtactgc
     2401 taacctgagc cgttcttcgt ttctgggtca caagtgaggt ctcgaaatgt cggcggtctg
     2461 tgaggtctgc gggaagcggc cccgggtggg catgcgggtg agccactccc accgccggac
     2521 gaagcggcgc tggaacccca acatccagcg gatccgggcc gtggtggccg gtgccccgaa
     2581 gcgggtgcgg gtctgcacct cctgcctcaa ggcggggaag atccagaagg gttgacggcg
     2641 ccgggcccgg cgcccaggtc cacgccggcg gcgatggccg ccgtgacgaa ctccttcgcc
     2701 ccctccaccg cctgaacgag gtcctcgccc cgcgccagcc gggcggtgac ggccgcggag
     2761 agcacgcacc cggtcccgtg cgtgttcggc gcgttgatgc gccgtcccgg caaccatcgt
     2821 ttggacagtt gtcggggact gtgcccgata actgtccaga cctcctccgc agggccgcgc
     2881 cacatcagca ggtcggggga ttccgggccg ggcaggtgtc cgcccgtgag gagcacgccc
     2941 cgcggcccga gatcgagcac cgccgccgcc gcccgctcga ccccggcctc gtcggacggg
     3001 acctcgtcga gacccgccag cgcggccgcc tcggccaggt tcggggcgac gaggtcggcg
     3061 agcggcagga gccgcgtccg gagggcctcc aggccatcgg gcgagagcag cgccccaccg
     3121 gccgacgcca ccgccaccgg atcgacgacg agcgggtgga ggtcccactc ctccaccgcc
     3181 gtcgccaccg cttcgacgac ggcggcgtcg ccgagcatcc ccgtcttcat ggcggcgatt
     3241 gcgaagtcgc cggccaccgc cccgatctgg gccgccacga tgtccggccg gagcacctcg
     3301 accgccgcca cgccgagggt gttctgggcc gtgacggcgg tcacggcgaa ggtgccccag
     3361 acgccgtggg cggcgaaggt cttcaggtcg gcggcgatgc cggctccgcc gccggagtcg
     3421 gtcccggcca ccgtgagggc gaccggcggc ctcactcgac cgcgtgttcc cagccgctcg
     3481 gggccagcgg ccagctgccg ccgcccggtg tcgagagcag gacgccgtcg ccggcggtca
     3541 ccgtcccgat cggcgccggg aggtggagac cggcggcggc gaaggcctcg gccacccgca
     3601 cggggtcggc ggccgtgaag cacagctcgt agtcgtcgcc gcccgagagg gcgtcgtcga
     3661 ccgtggcccc cggcccggcg gggatggccg ccgcctcgag gcgggccccc acacccgagg
     3721 cccggcagag gtgggcgagg tcggacgaca gcccgtccga gacgtcgatc atggccgagg
     3781 ctccggcgat ggcggcggtc cgcccctcga ggagccgggg caccggacgc tgtagccggg
     3841 ccaggcccac cggatcgggt tccgcacccc ggcggagagc ggcgagcgcg gccttcggcg
     3901 cgccgagcgg gcccgtgacg aagacgctgt cgccgggccg cgctccgctc cggaggacgg
     3961 cgccgctccc gggcgaatcg cccaccaccg ccacggtcac cgtcagggcc gccccgacca
     4021 ccgtgtcccc gccgacgagg gcgcacccga gctcggaggc ggcggccagg agcccggcgg
     4081 cgacctcgtc ggcctcgccc ttgcggccgg cgccgagcac caccccgcac accgccgccc
     4141 ggggggcgcc gcccatggcg gcgatgtcgg agaggttgac ggccagcgcc ttccagccga
     4201 cgtcggccgg cgtcgaccag cgcaggtcga agtggacgcc ctcggtgagg acgtcggtgg
     4261 cgaagagcag accgccgtcg aggacggcgg tgtcgtcgcc gacgccgacc tgaccggacg
     4321 gcggttccgg cagcgccagg cgcagccgct ccaggaacgc gaattcgccg ctcagcaagg
     4381 cctccggcgt agcgtgaggg ggaaacggcc gca
//
LOCUS       DATGJT010000215         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_651521, whole genome shotgun sequence.
ACCESSION   DATGJT010000215 DATGJT010000000
VERSION     DATGJT010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651521"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VKX24_03680"
     CDS             complement(<1..283)
                     /locus_tag="VKX24_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020121952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HLJ07610.1"
                     /translation="MAGRSVDLVLLVLRVSTGAVFLAHGINHIFGGGKIAGTAGWFES
                     LGMRPGWLHAWTASLTEIGAGGLLVLGLFTPVAAAGVIGVMLVAWVTNHA"
     gene            358..1194
                     /locus_tag="VKX24_03685"
     CDS             358..1194
                     /locus_tag="VKX24_03685"
                     /inference="COORDINATES: protein motif:HMM:NF013328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HLJ07611.1"
                     /translation="MPELPEMQALAERLDAALASRVLTRWDLLGFSSLKTFAPSPDEL
                     VGSAVQAVSRRGKYVVVTFEGGRRLLVHLSQGGRLDLESPPKKTKPRGALVRLTFGDL
                     GVLVREHGTQRKAGWWVLERDDDGPLATLGPEPDDPRFAALFLDGDSTRQVHSLLRDQ
                     HFVAGIGRGYADDALNRAKLSPFASLRGLTSEQRQGLVDSVRSVLAEALERERTREGG
                     LSAPRLGERFLVHNRTGQPCLNCGAALRVVQFDSHEVVYCPECQTKGKVLADRRLSRL
                     LR"
     gene            complement(1214..1669)
                     /locus_tag="VKX24_03690"
     CDS             complement(1214..1669)
                     /locus_tag="VKX24_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006680274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ07612.1"
                     /translation="MSPEGGAVHVEPALTADPELYDALVRLVPQLSSSAGVPTAYDLE
                     TIVESPATTLFVAREADGQIVGSLTLAVFRTPTGVRAWIEDVVVDEAARGRGIAPALI
                     EAALETARMAEARTVDLTSRPDRESANRMYQRLGFERRETNVYRVTLTS"
     gene            complement(1666..>2279)
                     /locus_tag="VKX24_03695"
     CDS             complement(1666..>2279)
                     /locus_tag="VKX24_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HLJ07613.1"
                     /translation="VAADIRATAEEGFEGVEDAEGLVEEWLDQVVEGIPGYVTPKVAI
                     GAAVGNDRGELLLIKRADSGVWLYPTGWCDVGYSAAEVAVKEVREETGIEVEPVRLIG
                     VLDGLRMGITRIPLYSLLFYCRAVGGSLEPHPLECSDVGWFSPDNLPTPLVGAERWGE
                     AVFAAIRGEVRDVFYDRIRRPLWRGTPDEPGAEAEAGRPDRTT"
BASE COUNT          311 a          856 c          805 g          307 t
ORIGIN      
        1 gggcgtggtt cgtcacccag gcgacgagca tcaccccgat gacgccggcc gcggcgaccg
       61 gcgtgaagag gccgagcacg agcagccccc cggcaccgat ctcggtgagg ctcgccgtcc
      121 aggcgtgcag ccaaccgggt cgcatgccga ggctctcgaa ccagccggcg gtgccggcga
      181 tcttcccgcc gccgaagatg tggttgatcc cgtgcgcgag gaagaccgca ccggtgctca
      241 cccggagaac caacaacacg agatcgacgc tgcgtccggc catctgcacc cccgaaccgc
      301 ccaacgtaga ccgggttggc cggtccacgg ccgaccagcc gtacactgat ctccccggtg
      361 cccgaactcc ccgagatgca ggcgctcgcc gagcgactcg acgccgccct ggcgtcccgg
      421 gtgctcacgc gctgggatct cctgggcttc tcgagcctca agaccttcgc cccctccccc
      481 gacgagctgg tcggctcggc ggtgcaggcg gtgtcccggc gcggcaagta cgtggtcgtg
      541 accttcgagg ggggccgccg gctcctcgtc cacctctcgc agggcgggcg gctcgacctc
      601 gagtccccgc ccaagaagac gaagccccgc ggcgccctcg tgcgcctcac cttcggcgat
      661 ctcggggtgc tggtgcgcga gcacgggacc cagcggaagg ccggatggtg ggtgctcgag
      721 cgcgacgacg acgggccgct cgccaccctc ggtcccgagc ccgacgaccc gcgcttcgcc
      781 gccctgttcc tcgacggcga cagcaccagg caggtgcact cgctgctgcg ggaccagcac
      841 ttcgtggccg ggatcggtcg cggctacgcc gacgacgctc tcaaccgggc caagctctcg
      901 cccttcgcct cgttgcgggg cctgacctcc gaacagcgcc agggcctcgt ggactcggtc
      961 cgctccgtgc tggccgaggc gctcgaacgg gaacggaccc gcgaaggggg gctgtcggcc
     1021 ccccggctgg gcgagcgatt cctggtgcac aaccggaccg gacagccctg cctcaactgc
     1081 ggggcggcgc tccgtgtggt ccagttcgac agccacgagg tcgtctactg cccggaatgc
     1141 cagacgaagg gcaaggtgct cgccgaccgg cggctgtcgc gcctgttgcg ctgacgccgc
     1201 cggtgtcggg cggctacgag gtgagggtca cccgatagac gttggtctcc cggcgctcga
     1261 acccgagacg ctggtacatc cggttcgcgc tctcccggtc gggtcgggag gtgaggtcga
     1321 ccgtgcgggc ctcggccatc cgtgcggtct cgagcgcggc ctcgatcagc gccggggcga
     1381 tgccccggcc gcgggccgcc tcgtccacga ccacgtcctc gatccaggcc cggacccccg
     1441 tcggcgtgcg gaacacggcc agggtgagcg atccgacgat ctggccgtcg gcctcgcggg
     1501 cgacgaacag ggtggtggcc gggctctcga cgatggtctc gaggtcgtag gcggtgggca
     1561 cgccggccga gctcgacagc tgcggcacga ggcggacgag cgcgtcgtag agctcggggt
     1621 cggcggtgag cgccggttcg acgtggaccg cgccgccctc ggggctcacg tggtccggtc
     1681 gggtcggccg gcctcggcct cggccccggg ctcgtcgggc gtgccccgcc acagcggccg
     1741 gcggatccgg tcgtagaaga cgtcgcgcac ctcgccccgg atggcggcga agacggcctc
     1801 gccccaccgc tcggccccga cgagcggcgt cggcaggttg tcgggcgaga accagcccac
     1861 gtcgctgcac tcgagggggt gcggctcgag cgagccgccc acggcgcggc agtagaagag
     1921 gagcgagtag agcgggatcc gggtgatgcc catccgcagg ccgtcgagga cgccgatcag
     1981 ccggacgggc tcgacctcga tcccggtctc ctcccgcacc tccttgaccg cgacctcggc
     2041 ggccgagtag cccacgtcgc accacccggt cgggtacagc cagacccccg agtcggccct
     2101 cttgatgagg agcagctccc ccctgtcgtt gccgacggcg gcgccgatcg ccaccttggg
     2161 ggtgacgtag ccggggatcc cctccacgac ctggtcgagc cactcctcga ccagaccctc
     2221 ggcgtcctcc accccctcga agccctcctc ggcggtggcc cggatatcgg ccgcgaccc
//
LOCUS       DATGJT010000216         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_236644, whole genome shotgun sequence.
ACCESSION   DATGJT010000216 DATGJT010000000
VERSION     DATGJT010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236644"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..718)
                     /locus_tag="VKX24_03700"
     CDS             complement(<1..718)
                     /locus_tag="VKX24_03700"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004365 - glyceraldehyde-3-phosphate
                     dehydrogenase (NAD+) (phosphorylating) activity [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HLJ07614.1"
                     /translation="MERTKIRVAVNGFGRIGRQVVRQMARSAPDLEVVAVNSVRARPE
                     MCAHLFKYDSVFGRFPGIVAHDDDHIVIDGHPVRITAQADPLLCPWHAFDVDVVVEAT
                     GRFTHRDEAVAHLRAGARKVLITAPARYEDLTVVVGVNDGEYDPDRHHVVSAASCTTN
                     CLAPVLSVLHDSFGVSGGLMTTIHAFTRDQELLDGTNGDLRRARAATLNMTPTKTGAA
                     RAIDRVMPELAGRIVGIAVRV"
     gene            complement(760..1383)
                     /locus_tag="VKX24_03705"
     CDS             complement(760..1383)
                     /locus_tag="VKX24_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007172209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HLJ07615.1"
                     /translation="MNFVEADHPAVVAFAEEATAGASSERDKAIAVYYAVRDGIRYDP
                     YSMSDDPDTYRSSTVIKTGTAYCIPKAVLLCGAARAAGIPARLGFADVRNHLSTPKLL
                     ERMGGSDLFIWHGYTELLLGDRWVKVTPAFNIELCERFGVLPLDFDGEHDALFHPFTA
                     DGRAHMEYVRYRGTFDELPFDDIMADFRQAFARILKESAPADTFNPA"
     gene            1438..2115
                     /locus_tag="VKX24_03710"
     CDS             1438..2115
                     /locus_tag="VKX24_03710"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ07616.1"
                     /translation="MTATHGAAFPSSPAGRLPSGRHGLTREAVEASQRGRLLDAMAQV
                     VAEKGYAATTVADVVERAGVSRRTFYEQFADKEACFLAAYDVGLEVVLGRIRDAIGSA
                     AAAAGWRERARAGVEAFLVLLASEPAFARALQVEILTAGPAALERRAGMLVMFAGIWR
                     NLHEAARAEDPALPPLPDDVFTVLTAGLEELVRDCVRTRGTAALPELAEPILRTVFAV
                     FGAAPPA"
BASE COUNT          302 a          815 c          867 g          337 t
ORIGIN      
        1 gcacccgcac cgcgatcccc acgatgcgcc cggcgagctc cggcatgacc cggtcgatgg
       61 cccgggcggc gccggtcttg gtcggcgtca tgttgagcgt cgccgcccgg gcccggcgga
      121 ggtcgccgtt ggtgccgtcg agcagctcct ggtcccgggt gaaggcgtgg atcgtcgtca
      181 tcagcccgcc cgacaccccg aacgagtcgt gcagcaccga cagcaccggc gccaggcagt
      241 tggtggtgca ggaggcggcc gacacgacgt ggtggcggtc ggggtcgtac tcgccgtcgt
      301 tcacgccgac cacgaccgtc aggtcctcgt agcgggccgg agcggtgatc agcaccttgc
      361 gggcgccggc ccggagatgg gccacggcct cgtcgcggtg ggtgaagcgc ccggtggcct
      421 cgaccacgac gtcgacgtcg aaggcgtgcc aggggcacag cagcgggtcg gcctgggcgg
      481 tgatccgcac cggatggccg tcgatcacga tgtggtcgtc gtcgtgggcc acgatccccg
      541 ggaagcgccc gaacaccgag tcgtacttga agaggtgggc gcacatctcc ggccgggccc
      601 gcaccgagtt gaccgccacc acctcgaggt ccggcgccga gcgggccatc tggcgtacga
      661 cctggcggcc gatccggccg aacccgttga cggcgacgcg gatcttcgtt cgctccatgg
      721 cggcgatggt cgccccgccg ccgacggctg tcctccccct caggcgggat tgaacgtgtc
      781 ggccggcgcc gactccttca ggatccgggc gaaggcctgg cggaagtcgg ccatgatgtc
      841 gtcgaacgga agctcgtcga aggtcccccg gtagcggacg tactccatgt gggcgcgccc
      901 gtcggcggtg aaggggtgga acagggcgtc gtgctcgccg tcgaagtcga gcggcaggac
      961 cccgaaccgc tcgcagagct cgatgttgaa cgccggcgtc accttcaccc accggtcccc
     1021 gagcaggagc tcggtgtagc cgtgccagat gaacaggtcg gagccgccca tccgctcgag
     1081 gagcttcggc gtgctcaggt ggttgcggac gtcggcgaag cccagccggg ccgggatccc
     1141 ggccgcccgg gcggcgccgc agaggagcac cgccttcggg atgcagtagg ccgtgccggt
     1201 cttgatcacg gtgctcgacc ggtaggtgtc cgggtcgtcc gacatcgagt aagggtcgta
     1261 gcggataccg tcccgcacgg cgtagtagac ggcgatcgcc ttgtcccgct cggaggacgc
     1321 tccggcggtc gcctcctcgg cgaaggccac gaccgcgggg tggtcggctt ccacgaagtt
     1381 catcggccca atgtagaagg gcgtcccgag gaacggtcac gtaccctgtc ggcgacgatg
     1441 accgccaccc acggagccgc cttcccgtcc agccccgccg gccggctgcc gagcggccgc
     1501 cacggcctga cgcgggaggc cgtcgaggcc tcccagcgcg gccgcctgct cgacgccatg
     1561 gcccaggtgg tggccgagaa gggctacgcc gccaccaccg tggccgacgt ggtcgagcgg
     1621 gccggggtgt cgcgccggac cttctacgag cagttcgccg acaaggaggc ctgcttcctg
     1681 gccgcctacg acgtcggcct ggaggtggtg ctcggccgga tccgcgacgc catcggaagt
     1741 gcggccgccg cggccggctg gcgggagcgg gcccgggccg gggtcgaggc cttcctggtc
     1801 ctgctggcgt ccgagccggc cttcgcccgg gcgctgcagg tggagatcct caccgccggc
     1861 ccggcggccc tggagcgccg ggccgggatg ctggtgatgt tcgccggcat ctggcgcaac
     1921 ctccacgagg cggcccgggc cgaggacccg gcgctgccgc cgctgcccga cgacgtcttc
     1981 accgtgttga ccgccggcct cgaggagctg gtgcgggact gcgtccgaac gcgggggacg
     2041 gccgccctcc ccgagctggc ggagccgatc ctgcggacgg tcttcgccgt cttcggggcc
     2101 gctccgcccg cctgactcgg cgggatttcg gccggcgggc ccgatcggcc gggattcggc
     2161 gttccccagg aacgacagat gttcctcagg aacgctggtc caccgacgcg gcgccggggg
     2221 ctggttcaat cgggtccatg gggtgcgacc ggtgacctat caggacgtcg tcctcttcgg
     2281 ccgggtcggg ctggccttcg tgctgtgcta cgccgtgggc t
//
LOCUS       DATGJT010000217         2453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_28855, whole genome shotgun sequence.
ACCESSION   DATGJT010000217 DATGJT010000000
VERSION     DATGJT010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28855"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VKX24_03715"
     CDS             <1..441
                     /locus_tag="VKX24_03715"
                     /inference="COORDINATES: protein motif:HMM:NF014110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07617.1"
                     /translation="VDVLAGQRITRVGADGSESVLPAGRSEPTGIVALALSPANPQTV
                     YLGGPVSGLWRTQDGGATWQLLDRIPAQALLVDPANPQEIFVGTVGGAFVSTDGGQTW
                     APTSLRNDVNGLSAAGGRIYAVGSERLIYASTDGISGWSQVSSG"
     gene            566..2086
                     /locus_tag="VKX24_03720"
     CDS             566..2086
                     /locus_tag="VKX24_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012693901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HLJ07618.1"
                     /translation="MALVGLEARAVEVEVQIEAGLPDVRIIGLPSVGVREARQRVRAA
                     VKNAGYTWPEARITANLAPGDLRKDGSLLDLPLAIAVLTAWGELPGLTQEAVSRHVFV
                     GELALDGSLRLIRGAVAAALTARDRGVDSLVVPWGNTSEAALVPGARVLGVTSLAEAV
                     EVARGRRSVVARPPALEEFLTEGAAAEPDLAEVRGQALARRALEIAAAGGHNLLMVGP
                     PGAGKTMLARRLPGILPPLTVDEALEVTHVWSVAGLLTEKQPVVAARPFRAPHHHASA
                     AAVIGGGSPVARPGEVSLAHRGVLFLDEAPLFGGTVLDALRQPLEDGSVSIARRAGTV
                     QFPSRCALVAAANPCLCRPQSHKGGTCTCATGRLQSYRSRLSGPFLDRIDLQVEVAAL
                     SEEELLEMEPSEPSAMVRARVLAARAAQLGRAEALNHSLSDRDLEDACALDAEGNAFL
                     RRAMATQPTSARAYHRLLRVARTIADLDGVAGVGEQQVAEALQFRRSVWEPDPWMM"
     gene            2074..>2453
                     /locus_tag="VKX24_03725"
     CDS             2074..>2453
                     /locus_tag="VKX24_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017245969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HLJ07619.1"
                     /translation="MDDVRPADGSPPADGSTPGRCPPADGSTPGFRTPAAALRARRVR
                     RGDPEYPALLDATPGAPPELFVSGRPLEPAPHVAVVGTRRASRYGLEVAGWIGKDLAA
                     AGIVVVSGMAAGVDGAAHRGALDAP"
BASE COUNT          278 a          910 c          934 g          331 t
ORIGIN      
        1 gtcgacgtgc tggccgggca gcggatcacc cgcgtcggcg cggacgggag cgagtcggtg
       61 ctgccggcgg gtcgctcgga accaaccggg atcgtcgccc tcgccctgtc gcccgccaac
      121 ccgcagaccg tctacctggg cggcccggtg tccgggctgt ggcggaccca ggacggcggg
      181 gcgacctggc agctgctcga ccggatcccg gcccaggcgc tgctcgtcga ccccgccaac
      241 ccgcaggaga tcttcgtcgg caccgtcggg ggcgcgttcg tctcgactga cgggggccag
      301 acctgggcgc cgacctcgct gcgcaacgac gtcaacgggc tgtccgccgc cgggggcagg
      361 atctacgcgg tgggctcgga gcggctgatc tacgcctcca ccgacggtat cagcggctgg
      421 tcgcaggtct cgtcgggctg agcgggcccg aagggggccc acggccctga ccaggtagaa
      481 ggattttttc gcgaactcac aaaacccgcc ggtttttgtc ggtgggcacc gttacggtgt
      541 gcacatgttc gctaaggttt cgtctgtggc actggtgggc ctggaggccc gtgccgtcga
      601 ggtcgaggtg cagatcgagg ccggcctccc ggacgtgcgg atcatcgggc tccccagcgt
      661 aggggtccgg gaggcccggc agcgggtgcg ggcggcggtc aagaacgccg gctacacctg
      721 gccggaggcc cggatcaccg ccaacctcgc cccgggcgac ctccgcaagg acgggtccct
      781 gctcgacctg ccgcttgcca tcgccgtgct caccgcctgg ggcgagctcc ccggcctgac
      841 ccaggaggcg gtgtcccggc acgtcttcgt cggcgagctg gccctcgacg gctcgctccg
      901 gctgatccgc ggggccgtcg ccgcggcgct gactgcccgc gaccgcggcg tcgacagcct
      961 ggtcgtgccc tggggcaaca ccagcgaagc ggccctggtg cccggggccc gggtcctcgg
     1021 ggtcacgtcg ctggcggaag cggtcgaggt ggcgcggggc cggcgctcgg tggtggcccg
     1081 gcctcccgcc ctggaggagt tcctgaccga gggggcggcg gccgagcccg acctcgcgga
     1141 ggtgcggggc caggcgttgg cccggcgggc gctggagatc gccgccgccg ggggccacaa
     1201 cctgctgatg gtcggtcccc cgggggcggg caagacgatg ctggcccgcc ggcttccggg
     1261 catcctccca ccgctgaccg tcgacgaggc actcgaagtc acccacgtct ggtcggtcgc
     1321 cggcctgctg accgagaagc agccggtggt cgccgcccgg ccgttccgtg cgccgcacca
     1381 ccacgcatcg gcggccgcgg tcatcggtgg tggcagcccg gtggcccggc cgggtgaggt
     1441 ctcgctggcc caccggggtg tcctgttcct ggacgaggcc ccgctcttcg ggggcacggt
     1501 gctcgatgcc ctgcgccagc cgctcgagga cggctcggtc agcatcgccc gccgggcggg
     1561 gacggtgcag ttcccgtccc gctgcgccct cgtcgccgcc gccaacccct gcctgtgccg
     1621 gccgcagagc cacaagggcg gcacctgcac ctgcgccacc ggacggctgc agtcctaccg
     1681 gtcccggctc tccggcccgt tcctggaccg catcgatctc caggttgagg tcgccgccct
     1741 gagcgaggag gaactcctcg agatggagcc ctccgagccg tcggccatgg tgcgggcaag
     1801 ggtgctcgcc gcccgggccg cccaactcgg gagggccgag gcgctgaacc actcgctgtc
     1861 cgaccgcgac ctggaggacg cctgcgccct agatgccgag gggaacgcct tcctccgccg
     1921 ggcgatggcg acccagccga cgtcggcccg ggcgtatcac cggctgctgc gggtggcacg
     1981 cacgatcgcc gatctcgacg gggtcgccgg cgtcggggag cagcaggtcg ccgaggcgct
     2041 ccagttccgg cgcagcgtgt gggagccgga cccgtggatg atgtgaggcc ggcggacggg
     2101 tcccccccgg cggacgggtc gaccccgggc cgttgcccgc cggcggacgg gtcgaccccg
     2161 gggttccgga cgccggccgc cgcgctgcgg gcgcggcgcg tccggcgcgg tgaccccgag
     2221 tacccggccc tgctcgacgc gacgccgggt gcgccgccgg agctgttcgt ctccggcagg
     2281 cccctcgagc cggcgcccca cgtcgccgtc gtcgggaccc ggcgggcctc ccggtacggg
     2341 ctggaggtgg cgggctggat cggcaaggac ctcgctgccg ccgggatcgt cgtggtcagc
     2401 gggatggccg ccggcgtcga cggcgccgcc caccgtggcg ccctcgacgc ccc
//
LOCUS       DATGJT010000218         3797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_236866, whole genome shotgun sequence.
ACCESSION   DATGJT010000218 DATGJT010000000
VERSION     DATGJT010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236866"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1302
                     /locus_tag="VKX24_03730"
     CDS             <1..1302
                     /locus_tag="VKX24_03730"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005061076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HLJ07620.1"
                     /translation="EDRIVLVDGSLIPLLARVAADLKTVEHFVVVGEGDGSALGPNVL
                     SYEELLAAESGEVYPYPEIDERSAAAMCYTSGTTGNPKGVVYSHRSTYLHSMAATSGT
                     TFALTERDRILPIVPMFHANAWGLPYAGWMAGSDFVMPNRFLQGEPLVKLIMAEKPTV
                     SGAVPTVWNDILAYADKHKDSVDLTSLRLVACGGSAVPRSLMEAFQERYGVRIVQAWG
                     MTETSPIAAVAMPPEGIPAEEEMDWRAKTGRVIAGVELRITADDGSVLPWDGDAVGEI
                     EVRGPWITASYYKDDDPQKFHEGWLRTGDVGCVEANGFVQITDRAKDVIKSGGEWISS
                     VELEGTLMAHPSVKEAAVVGVPDERWDERPLACVVLNEGESASVDDLKGFLADRVAKW
                     WLPERWTFIEEVPKTSVGKFDKKVLRARYADGELDVTEVER"
     gene            1516..2847
                     /locus_tag="VKX24_03735"
     CDS             1516..2847
                     /locus_tag="VKX24_03735"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HLJ07621.1"
                     /translation="MPWRMLSGRPRHLQVLVLSLVVLTIGVATAYGRTGGSTANLETA
                     AAVDGGQFNDVPPPALAADPPTTAAPPATTAPAPAASSTTTAPAPDRSAEATTTPPST
                     APAAAAAPPPAPVVAAPKPIIPLGKGMWLYQLSMSEGGDAAKVVAKAKANGLTHLYLR
                     LGSSKGGFYDQAELDQLLPVAHAAGLKVVGWDFVYLDDPAADAARAKSEIDYTTPTGD
                     RIDAFSADIETVSEGVNLTPETASAYGAKLRALVGSSYPLIATVPRPSPVRAFPFAEA
                     TASFDAIAPMVYWENRDPATDVAGAIATLAPLGKPILPIGQAYNGAAEGGPDRDPPKE
                     QIVAFMNTAMAKGAVGVSFWVWNHATADQWSAIGQAIAWELPAGGRAASSAAAVFLQR
                     VLGVLGQPVAQDGMIGPATRAAIAAVQQSLGLPATGMLDAATARSITGPRR"
     gene            complement(2828..3628)
                     /locus_tag="VKX24_03740"
     CDS             complement(2828..3628)
                     /locus_tag="VKX24_03740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07622.1"
                     /translation="MARPSDEHRRPPGPEPWWADAWEIDFAAESPEGAVGGFVRLALL
                     PNQGRAWWWTGLLTPRLVAVRDHDVPLPRAGLEVRADGLWGELVCETPLEHWSVGLEA
                     FGVAYDDPADAWGDEWGERLPVGLDLEWEATAEPGGVSPSGPAPGGPQAAGYAQPGRV
                     HGEILLVEDRIAVAGTGFRSRSSGVLDWWSAPLPGRLAWIGAGDHAGVDTVGVGDPAA
                     VDHTVLGRAPVLVTAPDRASVRLSRTLCRIDGEGGGLGWAESSSGAGR"
BASE COUNT          549 a         1456 c         1296 g          496 t
ORIGIN      
        1 gaggaccgga tcgtcctcgt cgacggcagc ctcatccccc tcctggcccg ggtggccgcc
       61 gacctcaaga ccgtcgagca cttcgtcgtc gtcggcgagg gcgacgggag cgccctcggc
      121 cccaacgtcc tctcctacga ggagctgctg gccgccgaat ccggcgaggt ctatccctac
      181 cccgagatcg acgagcggtc ggcggcggcc atgtgctaca cgagcggcac cacgggcaac
      241 cccaagggcg tcgtctacag ccaccgctcc acctacctgc actcgatggc cgccaccagc
      301 ggcacgacct tcgccctgac ggagcgcgac cggatcctgc cgatcgtgcc gatgttccac
      361 gccaacgcct gggggctgcc ctacgccggc tggatggcgg gctccgactt cgtgatgccc
      421 aaccggttcc tccaggggga accgctggtg aagctcatca tggccgagaa gccgacggtg
      481 tcgggcgccg tgcccacggt ctggaacgac atcctcgcct acgccgacaa gcacaaggac
      541 agcgtcgacc tgacctcgct gcggctcgtg gcctgcggtg gatccgccgt cccccgcagc
      601 ctcatggagg ccttccagga gcgctacgga gtgaggatcg tccaggcctg ggggatgacc
      661 gagacgtcgc cgatcgccgc ggtggcgatg ccgccggaag ggattccggc cgaggaggag
      721 atggactggc gggccaagac cggccgggtg atcgccgggg tcgagctccg gatcaccgcc
      781 gacgacgggt ccgtcctgcc gtgggacggc gacgccgtcg gcgagatcga ggtccggggg
      841 ccgtggatca cggcctcgta ctacaaggac gacgacccgc agaagttcca cgagggctgg
      901 cttcggacgg gcgacgtcgg ctgcgtggag gccaacggct tcgtccagat caccgaccgg
      961 gccaaggacg tcatcaagtc cggcggcgag tggatctcct cggtggagct ggagggaacg
     1021 ctgatggccc acccgtcggt gaaggaggcg gcggtggtcg gcgtccccga cgaacggtgg
     1081 gacgagcgtc cgctggcctg cgtggtcctc aacgaggggg aatcggcgtc ggtggacgac
     1141 ctgaagggct tcctggccga ccgggtggcc aagtggtggc tgcccgagcg gtggacgttc
     1201 atcgaggagg tccccaagac cagcgtcggc aagttcgaca agaaggtcct gcgggcccgc
     1261 tacgccgacg gcgaactcga cgtgaccgag gtcgagcgct gattcttcca aaacctggtt
     1321 ctgcgacgcc gttattccag taattgccgg gggcttccgt aagaaattct ttcggcgcgc
     1381 cctctacagg cgctaggaat tctcaaggaa cgcgggcgac gcgtcgaaaa agacggcaga
     1441 ggattacaca cgcgtcatct cctgccgtct cactcgttgt actgaccgat gggctaccca
     1501 gaaaggacag gatccatgcc gtggcgcatg ctctccgggc ggccccggca tcttcaggtc
     1561 ctggtcctct cgctcgtcgt cctcacgatc ggcgtggcca ccgcctacgg gcgcaccggc
     1621 ggttcgacgg cgaacctcga gacggcggcc gccgtcgacg ggggccagtt caacgacgtc
     1681 ccgcccccgg ccctggccgc cgacccgccg accaccgccg ccccgcccgc cacgacggcg
     1741 ccggcccccg cggcgtcgag cacgaccacg gcgcccgctc ccgaccggtc cgccgaggcc
     1801 accaccaccc caccgtccac cgccccggcc gccgccgccg ctcccccgcc ggccccggtt
     1861 gtcgccgcgc ccaagccgat catcccgctc ggcaagggca tgtggctcta ccagctgtcg
     1921 atgtccgagg gcggcgacgc ggccaaggtc gtggccaaag ccaaggccaa cgggctgacc
     1981 catctctacc tccgactcgg ctcgtcgaag ggcggcttct acgaccaggc ggagctcgac
     2041 cagctgctgc cggtcgccca cgccgccggc ctcaaggtcg tcgggtggga cttcgtctac
     2101 ctcgacgatc ccgccgccga cgccgcccga gccaagtcgg agatcgacta caccaccccg
     2161 accggcgacc gcatcgacgc cttctccgcc gacatcgaga ccgtctccga gggcgtgaac
     2221 ctgacgccgg agacggcgtc ggcctacggg gccaagctgc gggccctggt cgggtcgagc
     2281 tacccgctga tcgccaccgt cccccgaccg agcccggttc gggcgttccc cttcgccgag
     2341 gccacggcca gcttcgacgc catcgccccg atggtctact gggagaaccg cgacccggcc
     2401 accgacgtcg ccggggccat cgccacgctg gccccgctcg gcaagcccat ccttcccatc
     2461 ggccaggcct acaacggcgc cgccgagggc ggcccggacc gtgacccgcc gaaggagcag
     2521 atcgtcgcct tcatgaacac cgccatggcc aagggcgcgg tcggcgtgtc gttctgggtc
     2581 tggaaccacg ccaccgccga ccagtggtcg gccatcggcc aggccatcgc ctgggagctt
     2641 cccgccggcg gccgggccgc ctccagtgcc gccgccgtgt tcctccagcg ggtgctcggc
     2701 gtcctcggcc agcccgtggc ccaggacggg atgatcggcc cggcgacccg ggcggccatc
     2761 gccgccgtcc agcagagcct cggcctgccc gccaccggca tgctcgacgc cgccacggcc
     2821 cgctcgatca ccggcccgcg ccgctagacg actcggccca cccgagtccg ccgccctcac
     2881 cgtcgatccg gcacagcgtc cgggacagcc gcaccgacgc ccggtccggg gccgtgacga
     2941 ggacgggggc gcggccgagc accgtgtggt ccaccgccgc cgggtcgccg acgccgacgg
     3001 tgtccacgcc ggcgtggtcg cccgctccga tccaggcgag ccggcccggc agtggcgccg
     3061 accaccagtc gaggacgccg gagctgcgcg accggaaccc cgtcccggcc accgcgatgc
     3121 ggtcctcgac caggaggatc tcgccgtgga cccggccggg ctgggcgtag ccggccgcct
     3181 gcgggcctcc gggggcgggc ccggacggcg acacgccgcc gggctcggcg gtggcctccc
     3241 actccaggtc gaggccgacc gggaggcgct cgccccactc gtcgccccag gcgtcggccg
     3301 ggtcgtcgta ggcgacgccg aaggcctcca ggccgacgct ccagtgctcc agcggcgtct
     3361 cgcagacgag ctcgccccac agcccgtcgg cccgcacttc gaggccggcc cggggcagcg
     3421 ggacatcgtg gtcccgcacc gcgacgagcc ggggcgtcag caggcccgtc caccaccagg
     3481 cccggccctg gttggggagc agcgccaggc gcacgaaccc gccgacggcg ccctccgggc
     3541 tctcggcggc gaaatcgatc tcccaggcgt cggcccacca cggctcgggt ccgggcgggc
     3601 gccggtgttc gtcgctcggt cgggccatag cggatcagac ttgcccgatt gccgctcacc
     3661 ggccccatcc gggccccggt accgtgattc catggccgct gggcggatca cccgccggca
     3721 gatgctgggg ctcctgggcg ccggtttcct caccgcctgc agttcgacgc gccgccagca
     3781 gggcgcggcc gtgggct
//
LOCUS       DATGJT010000219         2257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_133884, whole genome shotgun sequence.
ACCESSION   DATGJT010000219 DATGJT010000000
VERSION     DATGJT010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133884"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..611
                     /locus_tag="VKX24_03745"
     CDS             285..611
                     /locus_tag="VKX24_03745"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HLJ07623.1"
                     /translation="MDTHTEFGQAVSHIGKDSMVRVWGGFDSMRASLLSECLEDLVAT
                     GQRRITLDVSELQFADYTAVAILVGALTRIRHRGAEAAVSPQSCGAYRVLERIDPTMA
                     RGITID"
     gene            complement(642..926)
                     /locus_tag="VKX24_03750"
     CDS             complement(642..926)
                     /locus_tag="VKX24_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07624.1"
                     /translation="MHIDRVEAAESAPNAGKRISLAMLLLGAVLLWPVPLVGVLFFVA
                     GGFGLAISSEAMLTPASPAIADGAADPRRAPEPRSTLDPRISPSGEAYAD"
     gene            complement(1061..1927)
                     /locus_tag="VKX24_03755"
     CDS             complement(1061..1927)
                     /locus_tag="VKX24_03755"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07625.1"
                     /translation="MSTATAAVPTARSSPTHPGRGRPSMLSPFATLSQRRFALSARTP
                     REILVPLLTPILFADVIAPALAKSMPSTGGINYLSYVAVGTIGLLVPLSCVLGGIGMI
                     VDRESGARRDLLAAPIPRSLMVLGNLSVAVAVSAFQVVALIGAAALRGASFDTAVSGI
                     AWAVAATVGLAVAMHSVAEILAARIPKQEEYVGAAPAIALVPWFFAGSFFRITSMPIG
                     LAWIARGLPVTHALALLRYGLVDHRGHGLHDIWGMHNVAVMAGLSLAVVASFAVVMLA
                     LSVKISTRSAVQ"
     gene            complement(1961..>2257)
                     /locus_tag="VKX24_03760"
     CDS             complement(1961..>2257)
                     /locus_tag="VKX24_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07626.1"
                     /translation="IVALDTPRALLDSLGTEIVELRLEADVDAVLSFLQAQGAAGGDS
                     FTVGSTLTVPLRGGSSRQVIDAVADFGAAVTATSTRPPTLDDVYLRLTGNRLAA"
BASE COUNT          365 a          722 c          862 g          308 t
ORIGIN      
        1 caccgcggga tcgtgttaac gtcccttgct gtcgcgctgc tccagaccct ggtggcggga
       61 gtccgttctg gacgatcccc ggagccgcgt cttggaacaa cctgcgttcg gctttgatct
      121 gggtctcttt ggtgcttccc ccctcgtcgg ggagcgcgac agcccgcggc gccgctgacc
      181 ttccctgaac agcgggccgc ctcggcggcg tccgtcgggc ttccccctcc cgcccgcgtg
      241 gggagcccga cggagccgcc atctccacag gaattcgaaa ggccatggac actcacaccg
      301 agttcggaca ggcggtgagc cacatcggga aggactcgat ggtgcgggtc tggggtggct
      361 tcgacagcat gcgggcctcg ctcctgagcg agtgcctcga ggaccttgtc gccacaggac
      421 aacgccgtat cacactcgac gtttcggaat tgcagttcgc cgattacacg gcggtggcca
      481 ttctcgtcgg ggccctgacc cggatccgtc accggggcgc cgaggcggcg gtttcgccgc
      541 aatcctgcgg cgcctaccgg gtgctggaga ggatcgaccc gacgatggcc cgcggcatca
      601 cgatcgactg acccccccga ggcggcccgg cgatggaaac gtcagtcggc gtatgcctcg
      661 ccggacgggg aaatcctcgg gtcgagggtc gaacggggtt ccggcgctcg ccgcggatcc
      721 gccgcgccgt cggcgatggc gggtgacgcc ggggtcagca tggcctcgct ggagatggcc
      781 aggccgaagc ccccggcgac gaagaacagg acaccgacaa gcgggaccgg ccagaggagg
      841 acggcgccga ggaggagcat cgccaacgag atcctcttcc cggcgttcgg agcggactcg
      901 gccgcctcga ctcgatcaat gtgcatgctc gactcctggg catccaacgg agtggatggc
      961 gcaccagggt ctggagcagc gccgccgtca cgggtgatga tgcccgtgaa cgaccggatg
     1021 ctaacacggg tcgagcccgt cgttgccagc cgcccgaccg ctactggacg gcgctgcggg
     1081 tggagatctt gaccgacagg gccagcatga cgaccgcgaa ggaggcgacg accgccaggc
     1141 tgagaccggc catcacggcc acgttgtgca tgccccagat gtcatgcagg ccgtggccgc
     1201 ggtggtcgac gagcccgtaa cggaggaggg cgagggcgtg ggtcacgggg aggccccggg
     1261 cgatccaggc cagcccgatg ggcatggacg tgatgcggaa gaacgagccg gcgaagaacc
     1321 acgggaccag cgcgatggcg ggggcggcgc cgacgtattc ctcttgtttg gggatgcggg
     1381 cggcaaggat ctcggcgacg ctgtgcatgg cgaccgccag gcccacggtg gcggcgacgg
     1441 cccaggcgat accggagacg gcggtgtcga aggaggcgcc ccgcagcgcc gccgccccga
     1501 tgagggcgac gacctggaag gcactcacgg ccacggccac cgagaggttg ccgagaacca
     1561 tgagcgaccg ggggatgggg gcggcgagca gatctcgtcg ggcgccgctc tcgcggtcga
     1621 cgatcatgcc gatgccgccg agcacgcagc tgagcgggac cagcaacccg atggtgccga
     1681 cggcgacata gctcaggtag ttgatccctc cggtgctcgg catggacttg gccagggcgg
     1741 gagcgatgac gtcggcgaac aggatcgggg tcagcagcgg gaccaggatc tcccggggcg
     1801 tgcgggcgct cagcgcgaat cgtcgctggg agagggtggc gaagggcgaa agcatcgacg
     1861 ggcgcccccg tcccgggtga gtgggactgg aacgggcggt ggggacggcg gccgtcgcgg
     1921 tggacatggc ggggctctcc tcgtgcaggg ggacgggttg tcaggcggcg aggcggttgc
     1981 cggtgaggcg gagatagacg tcgtcgaggg ttggcggccg ggtgctggtg gcggtgaccg
     2041 ccgccccgaa gtcggcgacg gcgtcgatga cctgacggga cgagccgccc cgcagcggca
     2101 ccgtcaaggt ggagcccacc gtgaagctgt cgccgcccgc cgccccctgg gcctgcagga
     2161 acgacaggac ggcatcgacg tcggcctcga ggcggagctc gacgatctcg gtccccaggc
     2221 tgtcgagcag cgcccgtggc gtgtcgaggg cgacgat
//
LOCUS       DATGJT010000220         2536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1480918, whole genome shotgun sequence.
ACCESSION   DATGJT010000220 DATGJT010000000
VERSION     DATGJT010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1480918"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..580)
                     /locus_tag="VKX24_03765"
     CDS             complement(<1..580)
                     /locus_tag="VKX24_03765"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HLJ07627.1"
                     /translation="MRLLRLELAGFGAFRAPSTLTFDDADFFALVGPTGSGKSTILDA
                     VCFALYGSVPRYGAENLIRYVVSLGGSEAKVRLDFELAGDHYIATRVARRTPKGAVGT
                     KEARLERVTDGGGTEVVAGFEREMSAAVVALLGLRFDDFTRCVALPQGDFARFLRAKG
                     DERRELLLRLLNLEVYTQLGTTARRHEAEARSQ"
     gene            complement(577..1761)
                     /locus_tag="VKX24_03770"
     CDS             complement(577..1761)
                     /locus_tag="VKX24_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013676027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HLJ07628.1"
                     /translation="MKLLHTSDWHAGKVLKGVARLEEQRAVLGGLVDLARRESVDLVV
                     VAGDLYESAVPPPEAQGVVWSTLLGLRATGAEVVVVAGNHDNAAHFEALRPLAAAAGI
                     TVLGRVQQPDGGGVVRFATRGGEAVQVAALPFLSQRYVVRAAELMAGHAAEHAGSYAD
                     RYRRLVDGLCAGFTADTVNVVVAHAMVRGGRLGGGERDAQTIEDYYVDPTAFPAAAHY
                     VALGHLHRTQELPGACPIWYSGSPIQVDFGEGGDAKHAIVVDATAGAPARVRPVPLDH
                     VRRLRTLEGTLAELRARAGEVGDDLLRVVVREPARAGLADDVRELLRNAVDIRVAAAA
                     APVDGTAPSRAGLSPHQLFAAYLETQGVEDERVVQLFGRLLDEAHAAGETVGGPAGGA
                     VA"
     gene            complement(1772..>2536)
                     /locus_tag="VKX24_03775"
     CDS             complement(1772..>2536)
                     /locus_tag="VKX24_03775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020543840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ07629.1"
                     /translation="GSPHGDDGAWQVDGEVLRTYHELVDLVVDRLQSGAWGPPATTMG
                     TVNAFIRRLLSSQRGLGHLIRADVPLRPRHTIRTSEAQVTVVDLHNLPDRAKRFVVGV
                     TVKRTFEAKEMSGVPRPLLFLVLDELNKYAPREGQSPIKEILLDVAERGRSLGMILVG
                     AQQTASEVERRLIANASIRVVGRLDAAEAGRPEYGFLPSVQRDRATIAKPGTMFVSQP
                     EIPVPLVVEFPFPAWATRPDERAAPTGDADPFEGLS"
BASE COUNT          330 a          914 c          973 g          319 t
ORIGIN      
        1 tctggctgcg ggcctcggcc tcatggcggc gggcggtggt gccgagctgt gtgtagacct
       61 ccaggttgag gagccggagc agcagctccc ggcgctcgtc gcccttggcc cggaggaacc
      121 gggcgaagtc gccctggggg agcgccacgc agcgggtgaa gtcgtcgaag cgcaacccga
      181 gcagggcgac gacggcggct gacatctccc gttcgaagcc ggccacgacc tcggtgccgc
      241 cgccgtcggt gacccgttcc agccgcgcct ccttggtgcc gaccgcgccc ttcggggtgc
      301 ggcgggcgac ccgggtggcg atgtagtggt cgccggccag ctcgaagtcg aggcggacct
      361 tggcctccga cccgccgagg ctgacgacgt agcggatgag gttctcggcg ccgtagcggg
      421 ggacgctgcc gtagagggcg aagcagacgg cgtcgaggat cgtcgacttg cccgagcccg
      481 tcggcccgac gagagcgaag aagtcggcgt cgtcgaatgt cagcgtgctg ggggcgcgga
      541 acgccccgaa cccggccagc tcgaggcgca gcaacctcat gcgaccgctc ctccggcggg
      601 cccgccgacg gtctccccgg cggcgtgggc ctcgtcgagc agccgcccga agagctgcac
      661 gacccgctcg tcctcgacgc cctgcgtctc gaggtaggcg gcgaacagct ggtggggtga
      721 gagcccggcc cggctcgggg ccgtcccgtc gaccggcgcc gccgcggcgg cgacccggat
      781 gtcgacggcg tttcgcagaa gctcccggac gtcgtcggcc aggcccgccc gggccggttc
      841 cctgaccacc acccgcagaa ggtcgtcgcc cacctcgccg gcccgggccc gcagctcggc
      901 cagcgtgcct tccagcgtcc tcagccggcg gacgtggtcg agcggcaccg gccgcacccg
      961 ggccggggcg ccggcggtgg cgtcgacgac gatggcgtgc ttggcgtcgc ccccctcgcc
     1021 gaagtcgacc tggatcggcg agcccgagta ccagatgggg caggcgccgg ggagctcctg
     1081 cgtgcggtgg aggtggccga gggcgacgta gtgggcggcg gcggggaagg ccgtcgggtc
     1141 gacgtagtag tcctcgatcg tctgggcgtc gcgctcgccg ccgccgagcc ggccgccccg
     1201 gaccatggcg tgggccacca cgacgttgac ggtgtcggcg gtgaagccgg cgcagagccc
     1261 gtcgaccagc cggcggtagc ggtcggcgta gctgccggcg tgctccgcgg catggcccgc
     1321 catcagctcc gccgcccgca cgacgtagcg ctgcgagagg aagggcagcg ccgccacctg
     1381 gaccgcctcg ccgccccggg tggcgaaccg gaccacgccg ccgccgtcag gctgttgcac
     1441 ccggccgagg acggtgatgc cggcggcggc ggccagcggc cgcagcgcct cgaagtgggc
     1501 ggcgttgtca tggttgccgg cgacgacgac gacctcggcg ccggtggccc gcagcccgag
     1561 cagcgtcgac cacacgacgc cctgggcctc gggcggcggc acggccgact cgtagaggtc
     1621 gccggccacg acgacgagat cgaccgattc ccgccgggcg aggtcgacca ggccgccgag
     1681 gacggcccgc tgctcctcca gccgggccac ccccttcagc accttgccgg cgtgccagtc
     1741 ggaggtgtgg agcagtttca cgccggcttc ttcatgacag gccctcgaag ggatcggcgt
     1801 cgccggtggg cgccgcccgc tcgtcgggcc gggtggccca ggcggggaac gggaactcca
     1861 ccaccagcgg caccgggatc tccggctggg agacgaacat cgtgccgggc ttggcgatcg
     1921 tggcccggtc ccgctggacc gagggcagga agccgtactc cggccggccc gcctcggcgg
     1981 cgtcgagccg cccaaccacc cggatggagg cgttggcgat caggcgccgc tcgacctcgc
     2041 tggccgtctg ctgggcgccg acgaggatca tgcccagcga ccgcccccgc tcggcgacgt
     2101 cgagcaggat ctccttgatc ggggactgcc cctcgcgggg ggcgtacttg ttgagctcgt
     2161 cgagcaccag gaacagcagc gggcggggga cccccgacat ctccttggcc tcgaacgtgc
     2221 gcttgacggt cacgccgacc acgaaccgct tggcccggtc ggggaggttg tggaggtcga
     2281 cgacggtgac ctgcgcctcg gaggtgcgga tcgtgtggcg gggccggagg gggacgtcgg
     2341 cccggatcag gtgcccgagc ccccgctgcg acgacagcag ccgtcggatg aaggcgttga
     2401 ccgtgcccat ggtggtcgcc ggcgggcccc aggcgccgct ctgcagccgg tcgaccacga
     2461 ggtcgacgag ctcgtggtag gtccgcagca cctcgccgtc gacctgccag gcgccgtcgt
     2521 cgccgtgggg cgaccc
//
LOCUS       DATGJT010000221         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_134103, whole genome shotgun sequence.
ACCESSION   DATGJT010000221 DATGJT010000000
VERSION     DATGJT010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134103"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..690)
                     /locus_tag="VKX24_03780"
     CDS             complement(<1..690)
                     /locus_tag="VKX24_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018198038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl--tRNA ligase-related protein"
                     /protein_id="HLJ07630.1"
                     /translation="MSPLHFSAVALPKQSEDFPAWYQAVVKGAEMAEPSLVRGTMVIR
                     PYGYAIWERIQAAVDRRIKDTGHENLYFPLFIPAKLLEKEAEHVEGFAKECAVVTHHR
                     LEPKPGGGLQPAGELEEPLIVRPTSETIIGAMFSKWTQSYRDLPILINQWANVVRWEM
                     RTRLFLRTAEFLWQEGHTAHASSVEAEEEARKILEVYRTFAEDWMAMPVLTGPKSEGQ
                     KFPGAVYTLCIE"
     gene            complement(644..1615)
                     /locus_tag="VKX24_03785"
     CDS             complement(644..1615)
                     /locus_tag="VKX24_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07631.1"
                     /translation="MDRHLEQLVQWQARPQYGLITRRQVRELGISKGQIEGKLGRGEW
                     QVVWPGVYGLAGRPTGWPAPVMGAVLAAGEGAVASHRAAATLLDLPNMVRRPEITIPA
                     GRRVQVPGLIVHRSRRLEPEDLQPILGIPATSPARTIVDMASLLERSRLTAILDNAAA
                     RRLLTRRDLAEALARAQPGRQFAAGLRVVQELLDERPAGKRPLGSRQERRLLEAIRAA
                     GLPEPETQRKVVLPNGEVRYVDYAWDPPLFGLELISFRWHADLASHAYDAEREAELVA
                     LGWAIQRTTAHSVEYDLPRVIGQIARGLAVRGVVPATLQRRGASQAV"
     gene            complement(1762..>2086)
                     /locus_tag="VKX24_03790"
     CDS             complement(1762..>2086)
                     /locus_tag="VKX24_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012948167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HLJ07632.1"
                     /translation="DADLVFDVRFLPNPHWIEELRPLTGLNRRVRGYVLSQEAAKGFL
                     ARIRDLLEFLLPGYITEGRHYLTIAVGCTGGHHRSVVIADEIARFLQEKGYPCTVVHR
                     DVEKE"
BASE COUNT          323 a          737 c          685 g          341 t
ORIGIN      
        1 ctcgatgcag agcgtgtaga cggctccggg gaacttctgg ccctcgctct tcgggccggt
       61 cagaaccggc atcgccatcc agtcctcggc gaatgtccga tacacttcga gaatctttcg
      121 cgcctcttcc tccgcctcga cgctgctggc gtgcgcggtg tggccctcct gccagagaaa
      181 ttccgccgtg cgcaggaaca gccgcgtgcg catctcccag cggacgacgt tcgcccactg
      241 gttgatgagg atcggaaggt cccggtagct ctgcgtccac ttggagaaca tcgcgccgat
      301 gatcgtctcg ctcgtcggcc gcacgatgag cggctcttcg agctcacccg ccggctgcaa
      361 ccctccgccc ggcttcggct cgagcctatg gtgcgtgacg accgcgcact ccttggcgaa
      421 cccctcgacg tgctccgcct ccttctcgag cagcttggcc gggatgaaca gcgggaagta
      481 gaggttctcg tggccggtgt ccttgatccg ccggtcgacc gccgcctgga tccgctccca
      541 gatggcgtag ccgtaggggc ggatcaccat cgtgccgcgc accagcgagg gctcggccat
      601 ctcggccccc ttgaccactg cctggtacca ggcggggaag tcttcagact gcttgggaag
      661 cgccacggcg ctgaagtgta gcggggacaa cgccccggac cgcgaggccc cgggcgatct
      721 gaccgatgac cctcggcagg tcgtactcca cgctgtgcgc ggttgtccgc tggatggccc
      781 aacccagcgc caccagctcc gcctcccgct cggcgtcgta ggcgtgcgat gcaaggtcgg
      841 catgccagcg gaagctgatc agctcgagac cgaacagcgg cgggtcccag gcgtagtcca
      901 cgtagcgcac ttcgccattg gggagcacca ccttccgctg ggtctccggc tcgggcaggc
      961 cagcggcccg gatggcctcc agcaaccgcc gttcctggcg gcttcccagc ggccgcttcc
     1021 cggcggggcg ttcatcgagc agctcctgca ccaccctgag tccggcggcg aactgccgac
     1081 cgggctgggc ccgggccagc gcctccgcca ggtcacgccg ggtgagcagt cgccgggccg
     1141 ccgcgttgtc gaggatggcc gtgagccgcg atcgttcgag caacgaggcc atatcgacga
     1201 tcgtccgggc cgggctcgtg gccgggatgc cgaggatcgg ctggagatcc tccggctcca
     1261 gccgccgcga gcggtggacg atcaagccag ggacctggac gcggcgcccg gccgggatcg
     1321 tgatctccgg cctccggacc atattcggga ggtcgagcag cgtcgccgcc gcccggtgcg
     1381 aggccacggc cccctccccg gccgccagta ccgcccccat caccggggcc ggccaaccgg
     1441 tggggcgacc ggcgagcccg tacacgcccg gccacaccac ctgccactcg ccccggccga
     1501 gtttgccctc gatctggccc ttggagatgc cgagttcccg cacctggcgc cttgtgatca
     1561 ggccgtattg cgggcgggcc tgccactgaa ccagttgctc gaggtgtctg tccatgaccc
     1621 cattgaactg acacctaccg acaataagcg gcccgtcttt taaaagtgcg aagaacttcg
     1681 cagcataatg gtgacgtgtg gaagatcgct cctcctggag aggaccattc ttccacactc
     1741 ccggcagacg aaaagcttaa actactcttt ctcgacgtcc cggtggacca ccgtgcacgg
     1801 gtagcccttc tcctgcagga agcgggcgat ctcgtcggcg atcacgaccg accggtggtg
     1861 gcccccggtg cagccgacgg cgatcgtcag gtagtggcgc ccctcggtga tgtagccggg
     1921 cagcaggaac tcgagcaggt cgcggatgcg ggccaggaac cctttcgccg cctcctggct
     1981 gagcacgtag ccacggaccc ggcggttgag gccggtcagc gggcgcaact cctcgatcca
     2041 gtgcgggttg gggaggaagc gcacgtcgaa gaccaggtcg gcgtcg
//
LOCUS       DATGJT010000222         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_134253, whole genome shotgun sequence.
ACCESSION   DATGJT010000222 DATGJT010000000
VERSION     DATGJT010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134253"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /locus_tag="VKX24_03795"
     CDS             <1..713
                     /locus_tag="VKX24_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07633.1"
                     /translation="PGSIVFSLVYAEGLMIALAAGCFLALGRRRWVLGGVLAGLATAT
                     RPNAAVLVLACGWAAVAAIRRGQAKRRALAAPVLAAAGLSGFAVFQWLWTGEAGAWLR
                     VEQQGWNQRVDFGRVLFNEVLWFLKSPFGNVERVIVVVGLAFAAAGFVVLVGLVRRGR
                     IPGALAVYTVGIVVLGSVYRVDVLRPRAVLAAFPLFIALGNRLSRRTVAVLVAMGAVA
                     LVVLPWYYSLPVLSSSAP"
     gene            728..1453
                     /locus_tag="VKX24_03800"
     CDS             728..1453
                     /locus_tag="VKX24_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ07634.1"
                     /translation="MTTDPWEQHAGWWQEGFTDGADPEYEEQILPLAAEWLRGADRVV
                     DVGTGEGQLARLAVKVGARLVVGVDPTWGQLTVARERAGGPVYARAAAGRLPCRSGAF
                     DAVLACLVFEHIEDYAEAIAEVARVLRPGGRFLFFLNHPLLQTPGSGWIDDHILEEQY
                     WRIGPYLVEDNSDEEVAPGIVLPFIHRPLHRYVNAMADHGLLVERMEEPAPPEGFLER
                     AAEYREAATIPRLLFLAARKLER"
     gene            1481..>2118
                     /locus_tag="VKX24_03805"
     CDS             1481..>2118
                     /locus_tag="VKX24_03805"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HLJ07635.1"
                     /translation="MPDAGDRTRLTYAPALDGLRAVACLSVMLYHAKILSGGFLGVDV
                     FFTLSGFLITSLLVAELRAAGAVDLRAFWRRRIFRIVPLLATVSVTLFVWASVHGGDV
                     GRATILGALTSLLFCVNWLASRVTEGAGALTANWSVALEEQFYLVWPVVVSLLFRLRR
                     REKAIAGLVAGAAAALAVHRALIVPGSTYARVWFGIDTQADALLAGCAVALGL"
BASE COUNT          213 a          766 c          778 g          361 t
ORIGIN      
        1 tccccggctc gatcgtcttc tcgctggtct atgccgaggg cctgatgatc gccctggccg
       61 ccgggtgttt cctggccctc gggcggcgcc ggtgggtcct gggcggggtg ctggccggcc
      121 tggccacggc gacgcggccc aacgccgccg tgctcgtcct ggcctgcggc tgggcggcgg
      181 tggcggccat ccggcggggg caggccaagc gccgggccct cgccgcgccg gtgctggccg
      241 ccgccggtct ttccggcttc gccgtcttcc agtggctgtg gacgggcgag gccggcgcct
      301 ggctccgggt cgagcagcag ggctggaacc agcgggtcga cttcgggcgg gtcctcttca
      361 acgaggtgct gtggttcctc aagtccccgt tcgggaacgt ggagcgggtc atcgtggtgg
      421 tcgggctggc cttcgccgcc gccgggttcg tcgtcctggt cgggctggtc cgccgggggc
      481 ggatccccgg ggcgctggcc gtctacaccg tcggcatcgt ggtgctgggc tccgtgtatc
      541 gcgtcgacgt cctccggccg cgggccgtcc tggccgcctt cccgctcttc atcgccctcg
      601 gcaaccgcct ctcccgccgg acggtggcgg tgctggtggc gatgggggcc gtggccctcg
      661 tcgtcctgcc ctggtactac tcgctcccgg tgctctcctc gtcggccccc tgagcgagac
      721 tccgggggtg acgaccgatc cctgggagca gcacgccggc tggtggcagg agggcttcac
      781 cgacggtgcc gaccccgaat acgaggagca gatcctcccg ctggccgccg agtggctgcg
      841 aggcgccgac cgggtcgtcg acgtcgggac cggcgagggc caactggccc ggctggcggt
      901 caaggtcggc gcccgcctcg tggtcggcgt ggacccgacc tggggccagc tcaccgtggc
      961 ccgggaacgg gccggcggcc cggtctacgc ccgcgccgcg gccggccggc tgccctgccg
     1021 gagcggcgcc ttcgacgccg tcctcgcctg cctggtgttc gagcacatcg aggactatgc
     1081 cgaggccatc gccgaggtgg ccagggtgct gcggcccggg ggccggttcc tgttcttcct
     1141 caaccatccg ctgctccaga cgcccggcag cggctggatc gacgaccaca tcctcgagga
     1201 gcagtactgg cggatcgggc cgtacctcgt ggaggacaac tccgacgagg aggtggcccc
     1261 gggcatcgtg ctgccgttca tccatcggcc gctccaccgc tatgtcaacg caatggccga
     1321 ccacggtctg ctcgtggagc ggatggagga accggcgccg ccggaagggt tcctggaacg
     1381 ggcggccgaa taccgcgaag ccgccacgat cccccgattg ctcttcctcg ccgcccgcaa
     1441 gctggagcgc tgaagccggt cggccgatgc atgagaggtc atgcctgatg ctggcgaccg
     1501 cacccgcctg acctacgccc ccgcgctcga cgggctgcgg gcggtcgcct gcctcagcgt
     1561 catgctctac cacgccaaga tcctgagcgg cggcttcctc ggcgtcgacg tcttcttcac
     1621 cctgtcgggg ttcctcatca cgtcgttgct ggtggccgag ctgcgagcgg ccggcgcggt
     1681 ggacctccgg gccttctggc ggcggcgcat cttccggatc gtcccgctcc tggccacggt
     1741 ctcggtcacg ctgttcgtct gggcgtccgt ccacggcggc gacgtcgggc gggcgacgat
     1801 cctcggcgcg ctgacgtcgc tgctgttctg cgtcaactgg ctggcatcgc gggtcacgga
     1861 gggagccggg gcgctgaccg ccaactggtc ggtggccctg gaggagcagt tctacctggt
     1921 ctggccggtc gtcgtttcgc tgctgttccg gctccggcgc cgggagaagg ccattgccgg
     1981 cctcgtggcc ggtgcggccg cggcgctggc ggtccaccgg gccctgatcg tcccggggtc
     2041 gacctacgcc cgggtctggt tcggcatcga cacccaggcc gacgccctcc tggccggctg
     2101 cgccgttgcc ctcgggct
//
LOCUS       DATGJT010000223         2687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1067465, whole genome shotgun sequence.
ACCESSION   DATGJT010000223 DATGJT010000000
VERSION     DATGJT010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067465"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VKX24_03810"
     CDS             <1..673
                     /locus_tag="VKX24_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07636.1"
                     /translation="FGAGSASAEPITPVISTAGYRMVATDGGIFSYGDAAFYGSTGSI
                     RLAMPIVGMAATPSGKGYWFVASDGGIFSFGDAKFFGSMGGKPLNRPIVGMASTATGD
                     GYWLVASDGGIFSFGDAKFYGSTGAIKLNRPIVGMDRTSSGNGYRFVASDGGIFSFGD
                     ASFLGSMGGKPLNKPIVGMAKARTGDGYWLVASDGGIFSFGAAGFHGSTGAIKLNSPF
                     VGMAS"
     gene            904..2196
                     /locus_tag="VKX24_03815"
     CDS             904..2196
                     /locus_tag="VKX24_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07637.1"
                     /translation="MLAVACVGMLVYAVAWASPNDGTQLAPACAGPSADSTATTSCSD
                     AAVAPAAVTDSKSGGGSTSTTTDKGGNGSTSTTTDKGGNGPSTTTTGKGDKGSTTTTT
                     GKGGCDSSSQSAGGKGSGAGTPAQDKGKQGSASAASAGGCGGPTTTTTGKAGHGSTTT
                     TTDKGGKNATTTTTRKGGGGKSTGKSGGSTTTTTAKRGGSNPPPSQGGTVTPGPSSGG
                     PSSGDPSGGSGDPAASGDPGSQPVSPEQAPADGPSAAPAPDSGPAAGPDVAADPGPAD
                     GSFGPVNNFDGAPVAPLGADEPAAPVAVPAAGPSVVPLFGNLFTGAGSQTSSALAAPA
                     SAGAAVHPAAAPSLLAPESAVASPEVTESGEVSRSLPGLQTSVTESAFPARIISTPKV
                     FPVNRWDPLAAALLVMAAGLAREALKAWRRRAANIWPI"
     gene            complement(2234..2629)
                     /locus_tag="VKX24_03820"
     CDS             complement(2234..2629)
                     /locus_tag="VKX24_03820"
                     /inference="COORDINATES: protein motif:HMM:NF017832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA family protein"
                     /protein_id="HLJ07638.1"
                     /translation="METAAGPSSDVRCPACSRLLVLRSGPKVAPHYAHRPRQSCRNRP
                     GGAGRAPLRLEQLTLFELPPLELPPMGAVFEPFAGWGSTPVADGEPRSSRPSVQRAGR
                     RRRRRWAWLPRLLRWVRGGRGPASPGLHP"
BASE COUNT          374 a          998 c          984 g          331 t
ORIGIN      
        1 cttcggggcc gggtcggcgt cggccgagcc gatcaccccg gtgatctcga ccgccgggta
       61 ccggatggtc gccacggacg gcggcatctt ctcctatggc gacgccgcct tctacggctc
      121 gacgggcagc atccgcctcg ccatgcccat cgtgggcatg gccgccaccc cgtcgggcaa
      181 gggctactgg ttcgtggcct ccgacggcgg gatcttctcc ttcggggatg ccaagttctt
      241 cggctcgatg ggcggcaagc ccctgaaccg tccgatcgtc gggatggcgt cgacggccac
      301 cggcgacggc tactggctgg tggcctccga cggcgggatc ttctccttcg gtgacgccaa
      361 gttctacggc tcgaccggtg cgatcaagct caaccggccg atcgtgggga tggatcgcac
      421 gagcagcggc aacggctacc ggttcgtggc ctccgacggt gggatcttct ccttcggcga
      481 tgcgtcgttc ctcggctcga tgggcgggaa gccgctcaac aagccgatcg tcggcatggc
      541 caaggcccgg accggcgacg gttactggct ggtggcctcc gacggcggga tcttctcctt
      601 cggggcggcc gggttccacg gctcgaccgg cgcgatcaag ctgaacagcc cgttcgtggg
      661 gatggcgagt tagccggttg tctcgacgaa agccggcgtt tgccggcccg caggcaggag
      721 cggggcccca cggcggcgaa cccaaagtgg gacgtttgcc ccaaaccgtt catgacaatc
      781 ccgtaacgcg agtaacggac cagcgggctg gggcgctctt cctccccgag aacgcccgcg
      841 gctgatcgcg gccggaggtc ttcaaccatg ccgctcggat cccatcgcaa acgagtcccc
      901 gccatgctgg ccgtggcctg tgtcgggatg ctcgtctacg ccgttgcctg ggcctcgccc
      961 aacgacggca cccagctggc cccggcctgc gccggcccgt cggccgacag caccgccacg
     1021 acgtcctgct ccgatgccgc cgtggccccg gcggccgtca ccgacagcaa gagcggcggc
     1081 ggctcgacgt cgacgaccac cgacaagggc ggcaacgggt cgacgtccac cacgacggac
     1141 aagggcggca acgggccgtc gacgacgacg acgggcaagg gcgacaaggg gtcgacgacg
     1201 accaccaccg ggaagggcgg ttgcgactcg agcagccagt ccgccggcgg caagggcagc
     1261 ggcgccggca cgcccgccca agacaagggc aagcagggct cggcgtcggc ggcctcggcc
     1321 ggcggctgcg gcggcccgac cacgacgacg accggcaagg ccggccacgg ctcgaccacc
     1381 acgacgaccg acaagggcgg caagaacgcc accaccacga cgacccgcaa gggcggcggc
     1441 ggcaagagca ccggcaagag cggcggcagc accaccacga cgacggcgaa gcggggcggc
     1501 tcgaacccgc cgccgagcca gggcggcacc gtgacgcccg gcccgtcgag cggcggcccg
     1561 tcgagcggcg atccgtccgg tggatcgggc gatcccgcgg cgtcgggtga tccgggcagt
     1621 cagccggtct cgcccgaaca ggcgccggcc gacgggcctt cggccgcccc cgctcccgac
     1681 tccggtccgg ccgccggccc cgacgtggcc gccgatcccg ggcccgccga cggcagcttc
     1741 ggtccggtca acaacttcga cggggcgccc gtcgcgccgc tcggcgccga cgagccggcc
     1801 gctccggtgg ccgtgccggc ggcggggccg tcggtcgtgc cgctgttcgg caacctcttc
     1861 accggcgccg ggtctcagac gtcgtcggcc ctggccgctc cggcgagcgc cggcgccgcg
     1921 gtgcacccgg cggcggcgcc gtcgctgctg gccccggagt cggcggtggc ctcgccggag
     1981 gtgacggaat cgggcgaggt gagccgctcc ctgccggggc tgcagacctc ggtcaccgaa
     2041 tcggccttcc cggcccggat catctccacg ccgaaggttt tcccggtcaa ccgctgggac
     2101 ccgctggccg cggcgctgct ggtgatggcg gccggcctgg cccgggaggc gctcaaggcc
     2161 tggcgccgcc gggccgccaa catctggccg atctgacacc gccgagatcc gcgggccggc
     2221 gtcgcctcgt gtttcagggg tgaaggccgg gggacgccgg cccgcgccca cctctgaccc
     2281 agcgcagcag gcggggcagc catgcccacc gccgccgtcg gcgacgcccg gcccgttgca
     2341 ccgacggacg cgacgaccgc ggttccccgt cggccaccgg cgtggacccc catccggcga
     2401 acggctcgaa gacggcgccc atcgggggca gctcgagcgg cggcagttcg aacagcgtca
     2461 gctgctccag gcggagcggg gcccggccgg cgccgcccgg acggttgcgg cacgactgtc
     2521 ggggccggtg ggcgtagtgc ggcgccacct tcggccccga gcgcagcacg agcagccggg
     2581 agcaggcggg gcagcggacg tcgctgctgg gcccggccgc cgtctccatg gcggccaacg
     2641 ttagggcctg cgcagccgcc gacgacggta ttcgggatga cggtatt
//
LOCUS       DATGJT010000224         3991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_860422, whole genome shotgun sequence.
ACCESSION   DATGJT010000224 DATGJT010000000
VERSION     DATGJT010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3991
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860422"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VKX24_03825"
     CDS             <1..303
                     /locus_tag="VKX24_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07639.1"
                     /translation="PPPTSDGTFTETRADPTSVGRETGVAMEDPVLDEAFMRRYRELL
                     DAEDNAFDELEHAYEDGDREHFETDFAAWQTVLNRKLAFLERRGLAAEPTLSYRSA"
     gene            340..717
                     /gene="hisI"
                     /locus_tag="VKX24_03830"
     CDS             340..717
                     /gene="hisI"
                     /locus_tag="VKX24_03830"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HLJ07640.1"
                     /translation="MSASFTATPITTAPEHLARVKYDAGGLVPAIIQEAGTGAVLMLA
                     YMNDEALRQTLDTGRTWFWSRSRQEYWCKGETSGDRQYVREAYYDCDGDTLLFVVDQE
                     GKGACHTGERTCFFRSFADQPDG"
     gene            710..2302
                     /locus_tag="VKX24_03835"
     CDS             710..2302
                     /locus_tag="VKX24_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010239795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HLJ07641.1"
                     /translation="MAELRPSVTEFKELARDYTVVPVWREVLADLETPVSVFLKLVGP
                     GEGFLLESVEHGERWGRYSFVGRDPALTLIARAGTVRWLEGDTDPRQNGEGLAAGLPG
                     DRGALGALEALLARYRAPRLPDLPPFHGGIVGWLGYDVVREIERLPAVPARDPGLPDA
                     VMSLTGHVAAFDHFRQRIYLIENVLVRPGAGEAELGAAYEAAAGRLEALVDDLARSLP
                     YQPVAPPTGIAEGSELPAFRSSMAGGAYGRAVEAAREYILAGDIFQVVLAQRFDFDLG
                     CDPFDVYRVLRQVNPSPYMYFLRGADGGSGVSPGMITVCGSSPEPMVQLLDGRVISRP
                     IAGTRRRGRDDAADKRLAGELIEHPKERAEHVMLVDLARNDVGRVVRFGTEQVDELMT
                     LERYSHVMHLTSQVSGELRPGQGPVDVLRATFPAGTVSGAPKVRAMEIIDELEPVKRG
                     PYAGVVGYVDFSGNLDTAIAIRTMIVDGAGGASVSAGAGIVADSDPSDEDLECHNKAR
                     AILASAAAARNLRTRPQPTEAW"
     gene            2299..3372
                     /locus_tag="VKX24_03840"
     CDS             2299..3372
                     /locus_tag="VKX24_03840"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HLJ07642.1"
                     /translation="MSDRRTPLTAAREAAASEADDLGVAVASDFGDPAAEERAFADGA
                     ALVDRCARGAVLVEGPDGLKFLQSLLSQDIDTLSDGQGTHALLLQPQGKLDTDLRLLR
                     VGDTAWLDCEVGRGEALAASLRRFRIRIKADVEDRTGDWGCLTLRGPEAAARVEAAGG
                     PPLPGDLHAHVPWGAGTDLTRLVRADWPGGPPGADLVGPVGELEGLWTALRAAGFRPA
                     GLLAFEAARVRAGVPRQGLDIDERTIPQEAFLELDAVSFTKGCFLGQELVCRIDSRGH
                     VNRLLRTLRIGGGGIDTTPPSGAGIVVADKEVGALTTVARSEGGVVALGFVRREVEVP
                     ADVLVRWSGGEAPAVASALPERP"
     gene            3369..>3991
                     /locus_tag="VKX24_03845"
     CDS             3369..>3991
                     /locus_tag="VKX24_03845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HLJ07643.1"
                     /translation="MNRQRARAGLVAVMVAVVALPLLAGCSRHDGKALPKPKTPETTT
                     TTDPIDLTQVSLEPIAVTGKATTTTRPIGGGKGAIFGRVIDADGGTPVPGAFIRATYY
                     GDPSKPEVIEALSAGDGTYRFDQVLGGQWRVRAWKTPQLATLADETFFLGYTEQRQLD
                     LKVKAADDYTVTSSLAPNPPFTGSPVEVAVLVLNQTVDDNGVVHRSG"
BASE COUNT          531 a         1492 c         1453 g          515 t
ORIGIN      
        1 ccgccgccga cgtcagacgg taccttcact gaaacccgag ccgacccgac gtcggtcggc
       61 cgcgagacgg gggtggccat ggaagaccca gtgctcgacg aggccttcat gcggcgctac
      121 cgggaactgc tcgacgcgga ggacaatgcc ttcgacgaac tcgagcacgc ctacgaagac
      181 ggcgaccggg agcatttcga gaccgacttc gccgcctggc agacggtgct caaccgcaag
      241 ctcgccttcc tcgaacgccg gggtctggct gccgaaccga cgctgagcta ccgctccgcg
      301 taagcggccg gagcggggtt cgccggtagc attggcggcg tgtccgcctc cttcaccgcg
      361 accccgatca cgaccgcccc cgagcacctc gcccgggtca agtacgacgc cggcgggctc
      421 gtccccgcca tcatccagga ggcggggacg ggcgccgtcc tcatgctggc ctacatgaac
      481 gacgaggccc tgcggcagac gctcgacacc ggccgcacgt ggttctggtc ccgcagccgg
      541 caggagtact ggtgcaaggg cgagacgtcg ggcgaccggc agtacgtccg ggaggcgtac
      601 tacgactgcg acggcgacac gctgctgttc gtcgtcgacc aggagggcaa gggcgcctgc
      661 cacaccggcg agcggacgtg cttcttccgc agcttcgccg accagccgga tggctgagct
      721 ccgcccgtcc gtcaccgagt tcaaggaact ggcccgggac tacacggtgg tgcccgtgtg
      781 gcgcgaggtg ctggccgacc tggagacgcc ggtgtcggtg ttcctcaagc tcgtcggccc
      841 gggcgagggc ttcctgctgg aatccgtgga gcacggcgag cgctggggcc ggtactcctt
      901 cgtcggtcgc gaccccgccc tgacgctgat cgcccgggcg gggacggtcc ggtggctgga
      961 gggggacacc gaccctcgcc agaacggcga aggcctggcc gccgggctgc ccggcgaccg
     1021 cggcgccctc ggggccctcg aggcgctgct ggcccgctac cgggcgcccc gcctccccga
     1081 cctgccacct ttccacggcg gaatcgtggg ctggctgggc tacgacgtgg tgcgggagat
     1141 cgagcggctg cccgccgtcc cggcccggga cccgggcctg cccgacgcgg tcatgtcgct
     1201 caccggccac gtcgccgcct tcgaccactt ccggcagcgg atctacctca tcgagaacgt
     1261 cctcgtccgg cccggggccg gcgaggcgga gctcggggcg gcctacgagg ccgccgccgg
     1321 ccggctcgag gccctggtcg acgacctggc gaggtcgctg ccctaccagc cggtggcgcc
     1381 gcccaccggc atcgccgagg ggagcgagct cccggcgttc cgctcctcga tggccggcgg
     1441 cgcctacggc cgggcggtgg aggcggcccg cgagtacatc ctggccggcg acatcttcca
     1501 ggtcgtcctg gcccagcggt tcgacttcga cctcggctgc gacccgttcg acgtctaccg
     1561 ggtgctgcgc caggtcaacc cgtcgcccta catgtacttc ctgcggggcg ccgacggggg
     1621 ttcgggggtg tcccccggaa tgatcaccgt gtgcgggagc tccccggagc cgatggtcca
     1681 gctgctcgac gggcgggtca tctcccggcc gatcgccggc acgcggcgcc ggggccggga
     1741 cgacgccgcc gacaagcgac tggccggtga gctcatcgag caccccaagg aacgggccga
     1801 gcacgtgatg ctggtcgacc tggcccgcaa cgacgtcggc cgggtggtcc gcttcggcac
     1861 cgagcaggtc gacgagctca tgacgctgga gcggtacagc cacgtcatgc acctgacctc
     1921 gcaggtctcg ggagagctgc ggccggggca ggggcccgtc gacgtcctcc gggcgacgtt
     1981 cccggccggc acggtctccg gcgccccgaa ggtgcgggcc atggagatca tcgacgagct
     2041 cgagccggtc aagcgcggcc cctacgccgg cgtggtgggc tacgtcgact tctccggcaa
     2101 cctcgacacg gccatcgcca tccggacgat gatcgtcgac ggcgccggcg gcgcctcggt
     2161 ctcggccggc gccgggatcg tggccgactc cgacccttcc gacgaggacc tcgaatgcca
     2221 caacaaggcc cgggccatcc tggcctcggc ggcggcggcc cggaacctcc ggacccgacc
     2281 gcaacccacg gaggcctggt gagcgaccgg cggaccccgc tgaccgcggc ccgggaggcc
     2341 gccgcctccg aggccgacga cctcggggtg gccgtcgcct ccgacttcgg cgacccggcg
     2401 gcggaggagc gggcgttcgc cgacggcgcg gccctcgtcg accgctgcgc ccggggcgcg
     2461 gtgctggtcg aggggcccga cggcctcaag ttcctccaga gcctgctctc gcaggacatc
     2521 gacacgctgt cggacgggca gggcacccac gccctgctcc tccagccgca gggcaagctc
     2581 gacaccgacc tccggctgct gcgggtcggc gacaccgcct ggctcgactg cgaggtcggc
     2641 cggggcgagg cgctggcggc ctcgctccgg cggttccgga tccggatcaa agccgacgtc
     2701 gaggaccgga cgggcgactg gggctgcctc acgctgcggg gccccgaggc cgcggcgagg
     2761 gtcgaggccg ccggcgggcc gccgctgccg ggggacctcc acgcccacgt cccctggggc
     2821 gcgggaaccg acctcacccg gctggtccgg gccgactggc cgggcgggcc gcccggcgcc
     2881 gatctcgtcg gccccgtcgg cgagctcgaa gggctgtgga cggcgctccg ggcggcgggg
     2941 ttccgtcccg ccgggctcct cgccttcgag gcggcccggg tgcgggccgg cgtcccccgc
     3001 cagggcctcg acatcgacga gcggaccatt ccccaggagg ccttcctcga actcgacgcc
     3061 gtctcgttca ccaagggctg cttcctcggc caggagctgg tgtgccggat cgactcccgg
     3121 ggccacgtca accgcctgct gcggacgctg cggatcggcg ggggcggcat tgacaccact
     3181 ccgccgtccg gagcgggcat cgtggtggcc gacaaggagg tgggggcgct gacgacggtg
     3241 gcccgatcgg agggcggcgt ggtggccctc ggcttcgtcc gccgggaggt cgaggtgccg
     3301 gccgacgtcc tcgtccggtg gagcgggggc gaggcgccgg ccgtggccag cgcgctcccg
     3361 gagcggccgt gaaccgccag cgcgcccggg ccgggctggt ggccgtgatg gtggccgtcg
     3421 tggcgctgcc gttgctggcc ggctgctccc gccacgacgg caaggccctg ccgaagccca
     3481 agacgccgga gaccacgacc accaccgacc cgatcgacct cacccaggtg tcgctcgagc
     3541 ccatcgccgt caccggcaag gcgacgacca ccacccggcc catcggcggc ggcaagggcg
     3601 ccatcttcgg gcgggtcatc gacgccgacg gcggcacgcc ggtgcccggg gccttcatcc
     3661 gggcgacgta ctacggcgac ccgtccaagc ccgaggtgat cgaggcgctc tcggccggcg
     3721 acggcacata ccgcttcgac caggtgctgg gcggccagtg gcgggtccgg gcctggaaga
     3781 cgccgcagct cgccacgctg gccgacgaga cgttcttcct cggctacacc gagcagcgcc
     3841 agctcgacct caaggtcaag gcggccgacg actacaccgt cacctcgagc ctggcgccca
     3901 acccgccgtt caccggctcc cccgtcgagg tggccgtgct ggtcctcaac cagacggtcg
     3961 acgacaacgg cgtcgtccac cgctcgggga t
//
LOCUS       DATGJT010000225         2421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_134461, whole genome shotgun sequence.
ACCESSION   DATGJT010000225 DATGJT010000000
VERSION     DATGJT010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134461"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1799
                     /locus_tag="VKX24_03850"
     CDS             <1..1799
                     /locus_tag="VKX24_03850"
                     /inference="COORDINATES: protein motif:HMM:NF019368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004559 - alpha-mannosidase activity
                     [Evidence IEA];
                     GO_process: GO:0006013 - mannose metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 38 C-terminal
                     domain-containing protein"
                     /protein_id="HLJ07644.1"
                     /translation="PEAEWDAAAPLLDVAWDRLIANSAHDSAGGCCTDAAADEVLVRY
                     AEARQIGDALAEAALADLAAETGCGAGEVLVVNTGAATRSGVIEVTVPAGLDPDEAFV
                     GADGIPRAVQLLSVGRREVFAARVAGAKVGWVADRIAGSAFDGHPVRAWSLDGGRDRL
                     MFEAAGLDDDPVDLDDARRTLLALGGEGRPVTVRMDGPPRRRILVETGPVAGFGWTTL
                     RRGAVPAAEPSAPAVRSGGAAGGGVWLDNGIVRVDVDPGDGTFSIRDRNGRRVGGLNR
                     YTDGGDGGDTYTWCPPAVDTVIDRPESVAVTMEESGPLRARVAITAVHRWPIAAEGDE
                     RACSARSSAAALVTVVTAVSVTAGDPVVAVEPVLDNRCRDHRLRVHFPLPAPVAGSAA
                     GCAFAVVRRALEAEGGPAETPPPTFPARRFVDCSDGSAGLAVIADGTFEYEVCDGGRE
                     LAVTLLRATGWLSRRRLALRPDPAGPAIPVEGAQVQGRRRWRYGVLLHAGDWERAGLL
                     RRAAAFLDPLEAVAGAGNGVTGTGRRPSEGRAFRVAGAEVSAVLRSGADVLVRVFNAG
                     SQPATATVGEEHVDLGPWEIATVRTGRRPRPG"
     gene            complement(1768..>2421)
                     /locus_tag="VKX24_03855"
     CDS             complement(1768..>2421)
                     /locus_tag="VKX24_03855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07645.1"
                     /translation="DAGMIGSLDACAPLGLLPPADPWVTGTLDVVRERFCLGDAFYDA
                     LSRSGLRPALTLQIAACELDAGDHRGWRRLRRVLDGATPTFAWPEVVHPRLGGGCGGA
                     GHHGEAAAAFLDVVRRALVRETPAGGLALLPVFPPEWAGQPLEVHDAPTHHGRISYAL
                     RWHGDRPALLWHCERAGVALAIPGLDRSFSTTEQSGEALLAPYRARVPIPVEDAGPS"
BASE COUNT          270 a          870 c          995 g          286 t
ORIGIN      
        1 ggcccgaggc ggagtgggac gccgccgcgc cgttgctcga cgtcgcctgg gaccggctga
       61 tcgccaacag cgcccacgac tcggccggcg gctgctgcac cgacgccgcc gccgacgagg
      121 tcctcgtccg ctacgccgag gcccgccaga tcggcgacgc cctggcggag gcggcgctgg
      181 ccgatctggc cgccgagacc ggctgcggcg ccggcgaggt gctggtggtg aacaccggcg
      241 ccgccacccg gtcgggggtg atcgaggtca cagttccggc cggcctcgat ccggacgagg
      301 cgttcgtcgg tgccgacggg attccccggg cggtgcagct cctgtcggtc ggacgccggg
      361 aggtcttcgc cgcccgggtg gcgggggcga aggtgggctg ggtggcggat cgcatcgccg
      421 gttcggcgtt cgacggccat ccggtgcggg cctggtcgct cgacggcgga cgggatcgcc
      481 tgatgttcga ggcggccggc ctggatgacg acccggtcga cctcgacgac gcccgtcgga
      541 cattgctggc cctcggcggg gagggccggc cggtgaccgt ccgcatggac ggccccccgc
      601 gtcgccggat cctggtcgag accggcccgg tggccgggtt cggatggacg accctgcgtc
      661 gcggcgcggt cccggccgcc gaaccgtcgg cgccggcggt ccggtccggc ggcgcggccg
      721 gcggcggggt ctggctggac aacggcatcg tccgggtcga cgtcgatccc ggggacggga
      781 cgttctcgat ccgcgaccgc aacgggcggc gggtcggcgg gctcaaccgc tacaccgacg
      841 gtggggacgg cggcgacacc tacacctggt gcccgccggc ggtggacacg gtgatcgacc
      901 ggccggaatc ggtcgccgtc accatggagg agtccgggcc gctgcgagcc cgggtggcga
      961 tcaccgccgt gcaccgctgg ccgatcgccg ccgagggcga cgagcgggcc tgcagcgccc
     1021 ggtcgtcggc cgccgctctc gtgacggtcg tgaccgccgt gtcggtgacc gccggcgacc
     1081 cggtggtcgc cgtggagccc gttctcgaca accgctgccg cgatcaccgc ctccgggtcc
     1141 atttcccgtt gccggccccg gtggcgggct ccgccgccgg ctgcgccttc gccgtcgtgc
     1201 gccgggcgct cgaggcggag ggcgggccgg cggagacgcc gcccccgacg ttcccggccc
     1261 ggcgcttcgt cgactgctcc gacggctccg ccggcctggc ggtcatcgcc gacgggacgt
     1321 tcgagtacga ggtgtgcgac gggggccggg agctggcggt gacgctgctg cgggccaccg
     1381 gctggctgtc ccgccggcgg ctggcgctcc ggcccgatcc ggccggcccg gccattccgg
     1441 tcgagggggc gcaggtgcag ggacggcggc ggtggcgcta cggcgtcctc ctccacgccg
     1501 gcgactggga gcgcgccggt ctgctgcggc gggcggccgc cttcctcgat ccgctggaag
     1561 cggtggcggg ggccggcaac ggcgtcaccg ggaccgggcg gcgcccgtcc gagggaagag
     1621 cgttccgggt cgccggcgcc gaggtgtcgg cggtgctgcg gagcggggcc gacgtcctcg
     1681 tccgggtctt caacgccggg tcgcagccgg ccaccgccac ggtcggggag gagcatgtcg
     1741 acctggggcc gtgggagatc gccacggtca ggacgggccg gcgtcctcga ccgggatagg
     1801 gacccgggcc cggtaggggg cgagcagcgc ctcgccggac tgctcggtgg tcgagaacga
     1861 gcggtccagg ccggggatgg cgagggcgac gccggcccgt tcgcagtgcc acagcagcgc
     1921 cggacggtcg ccgtgccagc ggagggcgta ggagatgcgc ccgtgatgcg tcggggcgtc
     1981 atggacctcg agcggctgac cggcccactc cggcgggaag accgggagca gcgccagccc
     2041 cccggccggc gtctcccgga ccagcgcccg gcgcacgacg tcgaggaacg ccgccgccgc
     2101 ctcgccgtga tgcccggccc cgccgcagcc gccgccgagg cgggggtgca ccacttcggg
     2161 ccaggcgaac gtgggagtgg cgccgtcgag cacccggcgc agccgccgcc agccccggtg
     2221 atcgccggcg tcgagctcac aggcggcgat ctgcagggtc agcgccggcc ggagcccgga
     2281 acgggaaagg gcgtcgtaga aggcgtcgcc gaggcagaac cgctcccgga cgacgtcgag
     2341 cgtgccggtc acccaggggt cggcgggggg caggagtccg agcggggcgc aggcgtcgag
     2401 ggagccgatc atcccggcgt c
//
LOCUS       DATGJT010000226         2516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_134607, whole genome shotgun sequence.
ACCESSION   DATGJT010000226 DATGJT010000000
VERSION     DATGJT010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134607"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..493)
                     /locus_tag="VKX24_03860"
     CDS             complement(101..493)
                     /locus_tag="VKX24_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011894329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsI/CadI family heavy metal resistance
                     metalloenzyme"
                     /protein_id="HLJ07646.1"
                     /translation="MSRVQLALNVGDLDEAVTFYSKLFATEPAKRRPGYANFVVVEPA
                     LKLVLIEGGGEPGTLNHLGVEVASAGEVSDARRRLEAEGLTTAVEDGVACCFALQDKV
                     WIDAPDGEPWEIYTVLGDVEAPPAGCCS"
     gene            591..932
                     /locus_tag="VKX24_03865"
     CDS             591..932
                     /locus_tag="VKX24_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008308589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLJ07647.1"
                     /translation="MAPTARAASAAAESCCGSVLTAPLTQADAERLARGFAALADPVR
                     LRLLSLIAAADEVCSCDLLRPLGKSQPTVSHHTKALAEAGLIVGDRRGRWVYWRVVGE
                     QVEALRRALGP"
     gene            complement(950..1768)
                     /locus_tag="VKX24_03870"
     CDS             complement(950..1768)
                     /locus_tag="VKX24_03870"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ07648.1"
                     /translation="MADALGRFDPKSTYDEAARDYEDASREFWQYICLRVLERLEPVA
                     SERVLDVPCGSGPSVVAAAGHVSPSGSVVGIDFAEQMVAIAREKAESAGLTNVTLSVD
                     DMTTLDRSRFEPFDVVVCSLGLFFADDMPELLRTLSGLLRPGGRLGVAVFGEHVFDPL
                     RQVFVESVAEVAPGVEILQPWRRTEDVDVFRSLFEAAGVTEVAIATEDDRLPLRSSDD
                     WWRIVMGSGFRRTVAALDEPAVAEVRKRCDAYIAGHRIEAVVNRAHYAVARVPA"
     gene            complement(1787..2323)
                     /locus_tag="VKX24_03875"
     CDS             complement(1787..2323)
                     /locus_tag="VKX24_03875"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLJ07649.1"
                     /translation="MNGDRRYVVLTAVGPDRPGLVNQLSSLICEAGAGIEDSRMAILG
                     GEFAMILLISGPPGAIEAVEKVSGRVEADLGLRCVLKETSAAPPPSDSLPYRIEVSGA
                     DRPGIVHAVTAILAGRGINVANLESRVSHAPFSATPLFVLEAALQVPSTTVLSELRAD
                     LTATCDEENLDFRLQPGA"
     gene            complement(2313..>2516)
                     /locus_tag="VKX24_03880"
     CDS             complement(2313..>2516)
                     /locus_tag="VKX24_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07650.1"
                     /translation="TVTGPSLLWADVYATTTIVTGVATLEAIATLPGYEALVITPAGD
                     ALATPGFVLEQPGASVVSPGDER"
BASE COUNT          374 a          907 c          894 g          341 t
ORIGIN      
        1 ccgctgggcg aagattccgg agccgacgac gatggccacc aggagcgcgg tgccgacggc
       61 ttcggcggtc gccttgcggg ccagttcccg gtccaccgac tcaggagcag cagccggcgg
      121 gcggcgcctc gacgtcgccg aggacggtgt agatctccca cggctcgccg tccggggcgt
      181 cgatccagac cttgtcctga agggcgaagc agcacgccac gccgtcctcg accgcggtgg
      241 tcaggccctc ggcctccagc cgccgccggg cgtcgctcac ctcgccggcc gacgccacct
      301 cgacgccgag atggttcagc gttcccggct cgccgccgcc ttcgatcagg acgagcttca
      361 gggcgggctc gacgacgacg aagttggcgt agccgggacg gcgtttggcc ggttcggtgg
      421 cgaagagctt cgaatagaag gtcaccgcct cgtcgagatc gccgacgttc agggccagct
      481 gtacccggga cacggggcac ctccgataga ttcgtgagta tcgattgatc gactatcctc
      541 gatagatcga tagatgtcaa tgggttgccc actccaggag gtctccggcc atggcgccaa
      601 cggctcgggc cgcatccgcc gccgccgaat cgtgctgcgg ctcggtcctg acggcgccgc
      661 tgacgcaggc ggacgccgag cggctggccc gggggttcgc cgccctggcc gatcccgtcc
      721 gcctccggct gctgagcctc atcgccgccg ccgacgaggt ctgctcctgc gacctgctcc
      781 ggccgctcgg gaagtcgcag cccaccgtca gccaccacac caaggccctc gccgaggccg
      841 gcctcatcgt cggcgaccga cggggccgct gggtctactg gcgggtcgtc ggcgagcagg
      901 tcgaggccct ccgccgggcg ctcgggccgt aggcgggccg gcgcccggat caggccggca
      961 cccgggcgac ggcgtagtgc gcccggttga cgacggcctc gatgcggtgc ccggcgatgt
     1021 aggcgtcgca gcgcttccgc acctcggcca ccgccggctc gtcgagcgcg gccaccgttc
     1081 gccggaagcc cgatcccatg acgatgcgcc accagtcgtc ggacgaccgc agcggcagcc
     1141 ggtcgtcctc ggtggcgatc gccacctcgg tgacgccggc ggcctcgaag aggctccgga
     1201 acacgtcgac gtcctcggtg cgccgccacg gctggaggat ctccaccccc ggagccacct
     1261 cggcgaccga ctccacgaac acctggcgga ggggatcgaa gacgtgctcg ccgaacaccg
     1321 ccaccccgag ccggccgccc ggccgcaaca ggcccgacaa cgtccgcagc agctccggca
     1381 tgtcgtcggc gaagaagagc ccgagcgagc agacgacgac gtcgaagggc tcgaaccggg
     1441 accggtcgag ggtcgtcatg tcgtcgacgg acaacgtcac gttggtcagc cccgccgact
     1501 ccgccttctc ccgggcgatg gccaccatct gctcggcgaa gtcgatgccg acgacggacc
     1561 ccgacggcga gacgtgcccg gcggcggcga cgaccgaggg gccgctgcca caggggacgt
     1621 cgaggacccg ctcgctggcg acgggctcca gccgctccag gacccgcagg cagatgtact
     1681 gccagaactc ccgagatgcg tcctcgtagt cccgggccgc ctcgtcgtag gtcgacttcg
     1741 gatcgaaccg gcccagtgcg tcggccatcg cctgccgctt cccccgtcag gcgccgggtt
     1801 ggagccggaa gtcgaggttc tcctcgtcgc aggtggcggt caggtcggcc cgcagctccg
     1861 acaggaccgt cgtcgaagga acctggaggg cggcttcgag gacgaagagc ggagtggcgc
     1921 tgaacggggc gtggctgacc cgcgactcca ggttggccac gttgatcccc cggccggcga
     1981 ggatcgccgt gaccgcatgg acgatgccgg gccggtcggc tccgctgacc tcgatgcggt
     2041 acggcaggga gtccgagggc ggcggggcgg ccgaggtctc cttcaggacg cagcgcagtc
     2101 cgagatcggc ctcgacccgc ccgctgacct tctccacggc ctcgatggcg ccgggcgggc
     2161 cggagatcag gaggatcatg gcgaactcgc caccgaggat cgccatgcgg ctgtcttcga
     2221 tgccggcgcc cgcctcgcag atcagcgacg acagttgatt gacgagcccg ggccgatcgg
     2281 gccctacggc cgtgagcacc acgtagcgtc ggtcaccgtt catcgccagg ggacactacc
     2341 gaagcgccgg gctgctcgag cacgaacccc ggcgtggcca gggcgtcgcc cgccggggtg
     2401 atcacgaggg cctcgtaccc cgggagggtg gcgatcgcct cgagcgtggc gactccggtg
     2461 acgatcgtcg tggtggcgta gacgtcggcc cacagcagtg aggggcccgt gaccgt
//
LOCUS       DATGJT010000227         4790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1169231, whole genome shotgun sequence.
ACCESSION   DATGJT010000227 DATGJT010000000
VERSION     DATGJT010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4790
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1169231"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..1386)
                     /locus_tag="VKX24_03885"
     CDS             complement(181..1386)
                     /locus_tag="VKX24_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014983260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HLJ07651.1"
                     /translation="MTAALPRLDDRQRRARLGRRHHLAGPARSGDVVTVAGDLVGLHG
                     SDPATVFLAARARLRRSEHTVAALESALYTDRTLVRTLCMRRTMFVVPVDLVPVVQAA
                     VTDDLVPGERRRAARMVEDAGIAADGAAWLAAMEAEALAAIGRLKEATGAEVSKAVAG
                     LNHQIPVGEGRTWAGTVGMTSRVLFLLATEQRIVRGRPRGTWTSSQYRWSPMEEWVPG
                     GVPRMAAEEARAELARRYLASFGPVTTADLRWWTGWTAGRAAAALRATGAVEVALADG
                     GAGGPAWVLPDDVEPVRAGPPWVAFLPSLDPTTMGWQQRRWYLGEHAGVLFDRNSNAG
                     PTVWADGRVIGGWAQRRTGEVVHRLLEDVGAETAAAVARAGAELEAWLGPMRVTPRFP
                     TPLQKALSA"
     gene            complement(1383..2570)
                     /locus_tag="VKX24_03890"
     CDS             complement(1383..2570)
                     /locus_tag="VKX24_03890"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012891840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HLJ07652.1"
                     /translation="MPQTINPRLLSWASDVDPETIRQAEKTARLPIVEGHVALMPDAH
                     VGIGATVGSVIPTRGAVIPSAVGVDIGCGMIAAELDVTESALPDNLEPLLSGIERVVP
                     AGVGKGHDTGARGRAAETAGRAADRWLAAHRPATALSADQARKAAVQFGSLGSGNHFF
                     ELCLDERARVWVVLHSGSRGIGNQLAQAHIGKARRLAQEAMLSLPDPDLAWFVQGTPE
                     FEAYVTDMLWAQEYAMANRSTMMDAAIVEVLSFLGTGAVTRTINCHHNFSQLEVHGGR
                     ELWITRKGAIRADTGDLGVIPGSMGTRSYIVAGKGSAASWRSCSHGAGRRHSRTKARK
                     LFTPADLAAAMAGKTWLKGRAAALVDEIPSAYKDIDQVMADQSDLVEVLHTLHQVLNY
                     KGT"
     gene            2674..3513
                     /locus_tag="VKX24_03895"
     CDS             2674..3513
                     /locus_tag="VKX24_03895"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ07653.1"
                     /translation="MDDPYALHRQRRGLFSSDAAAYESGRPPYPERVYALLEQVCGLG
                     PGTEVVEIGPGTGLATARLLDHGASVTAVELSAEFSDRLRAKFAGRPLRVVVGAFEDV
                     ALEPASFDLAVAATSFHWVPADVGLRRCADILRPGGWLALWWNHFGDPDRPDPFRTAL
                     TPIFERLAPSLVETFPGAAFQAASGAGAHPWALDTAARAGDIEASGGFGPVRRETIAW
                     TGRHTAPELRTLFASFSPCLALPPDQRAAVLDAIERLAADEFGGVVERPYLTVLYLAS
                     RRT"
     gene            complement(3532..4092)
                     /locus_tag="VKX24_03900"
     CDS             complement(3532..4092)
                     /locus_tag="VKX24_03900"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HLJ07654.1"
                     /translation="MADTSEELGPRWQSERCPECAFDPNGVSAADLPAAVAGLGRRYQ
                     APLTRFLPGEDESILVARPQPGQWSALAYACHVRDVLTVFEGRILRMLDEDGPVFAVW
                     DQDAAVEADGYEKQAPAEVAAAVAANAARLSATLAAVPDGGWDRTGSRRDGAVFTVLG
                     AGRYALHEGTHHLLDIGRVLRAARGR"
     gene            complement(4102..>4790)
                     /gene="gatB"
                     /locus_tag="VKX24_03905"
     CDS             complement(4102..>4790)
                     /gene="gatB"
                     /locus_tag="VKX24_03905"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF014674.4"
                     /note="allows the formation of correctly charged
                     Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
                     of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
                     which lack either or both of asparaginyl-tRNA or
                     glutaminyl-tRNA synthetases; reaction takes place in the
                     presence of glutamine and ATP through an activated
                     phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HLJ07655.1"
                     /translation="DSWSAKAEAPTVEAAAEAGRAKVSTRPPKKSRTEYRAEARRRDP
                     VLAERFAAWPAVHGLSESDADLLTGDRATGDLFEGAVAAGAPAGAVARWIINELPREL
                     GERPLSDVPMTAAALGSLVRAVESGTISGPAGKEVFAVLMEQGGDPERIIADRGLAQV
                     SDEGAIAALVDDVVAANPDKVEAYRAGKTALAGFFVGQVVRASQGKANPQVVQKVVAE
                     RLGASSGPSA"
BASE COUNT          586 a         1865 c         1710 g          629 t
ORIGIN      
        1 acgaccagcg ccaggaccac tgacgccagc agcagcggca accgacgacg acgagcctgc
       61 cccgatacgt tcaacgcgag cccttccctc cctcggccgg cacgtcccga cccgtcggag
      121 cgaatgtaag gcgcgccgaa gacgctttgt caatctttgc tgtcatttag ccgacatccg
      181 tcaggccgac agcgccttct gcaacggcgt ggggaaccgg ggcgtgaccc gcatgggccc
      241 gagccaggct tcgagctcgg cgcccgcccg ggccacggcg gcggcggtct cggcgccgac
      301 gtcctccagg agccggtgga cgacctcgcc cgtccggcgc tgcgcccagc cgccgatcac
      361 ccggccgtcg gcccagaccg tcgggccggc gttgctgttg cggtcgaaga ggacgccggc
      421 gtgctcgccc aggtaccacc ggcgctgctg ccaccccatg gtcgtcgggt cgagcgacgg
      481 caggaacgcc acccacggcg gcccggcccg gaccggctcc acgtcgtcgg gcagcaccca
      541 ggccggtcct ccggcgccgc cgtcggccag cgccacctcc accgcgccgg tggcccggag
      601 cgccgcggcg gcccggcctg ccgtccagcc cgtccaccac cgcaggtcgg ccgtcgtgac
      661 cgggccgaag gaggcgagat agcgccgggc cagctccgcc cgggcctcct cggccgccat
      721 cctcgggacg ccgcccggca cccattcctc catcggcgac cagcggtact ggctgctggt
      781 ccacgtgccc ctcggccggc cccgcacgat ccgctgctcg gtggccagca ggaacaggac
      841 ccggctcgtc atgccaaccg tgccggccca cgtccggcct tcgcccaccg ggatctggtg
      901 gttgaggccg gccacggcct tcgacacctc ggcaccggtg gcctccttca gccggccgat
      961 ggccgccagc gcctcggcct ccatggccgc cagccaggcg gcgccgtcgg cggcgatgcc
     1021 ggcgtcctcc accatccggg ccgcccggcg ccgctccccg gggacgaggt cgtcggtcac
     1081 cgccgcctgc accaccggca cgaggtcgac cggcacgacg aacatcgtgc gccgcatgca
     1141 cagcgtgcgg accagcgtgc ggtcggtgta gagggccgac tccagcgccg ccaccgtgtg
     1201 ctccgaccgc cgcagccggg cccgggcggc gaggaacacg gtggccggat cgctgccgtg
     1261 gagcccgacg aggtcgccgg ccacggtgac gacgtcgcct gaccgggcgg gcccggccag
     1321 gtggtgtcgc cggcccagcc gggcccggcg ctgccggtcg tcgaggcggg gcagggcggc
     1381 ggtcacgttc ccttgtagtt gaggacctgg tgcagcgtgt ggaggacttc gacgagatcg
     1441 gactggtcgg ccatcacctg gtcgatgtcc ttgtaggcgg acgggatctc gtcgaccagc
     1501 gccgccgccc ggcccttgag ccacgtcttc ccggccatcg ccgccgccag gtcggccggg
     1561 gtgaacagct tgcgggcctt cgtgcggctg tggcgccggc cggcgccgtg ggagcacgac
     1621 cgccagctgg cggcgctgcc cttgccggcc acgatgtagc tccgggtgcc catggagccg
     1681 gggatcacgc cgagatcgcc ggtgtcggcg cggatggcgc ccttgcgggt gatccacagc
     1741 tctctcccgc cgtggacctc gagctgcgag aaattgtggt ggcagttgat ggtccgggtc
     1801 accgcaccgg tgccgaggaa cgacaggacc tcgacgatgg cggcgtccat catcgtcgac
     1861 cggttggcca tggcgtactc ctgggcccag agcatgtcgg tgacgtaggc ctcgaactcc
     1921 ggcgtgccct gcacgaacca ggccaggtcg ggatccggga gcgacagcat ggcctcctgg
     1981 gcgaggcggc gggccttgcc gatgtgggcc tgggccagct ggttgccgat gccccggctc
     2041 cccgaatgca gcacgaccca gacccgggcc cgctcgtcga ggcagagctc gaagaagtgg
     2101 ttgcccgagc cgagggagcc gaactgcacg gcggccttgc gggcctggtc ggcggagagc
     2161 gcggttgccg gtcggtgcgc cgccaaccac cggtcggcgg cccggccggc cgtctccgcg
     2221 gcccggcccc gggcgccggt gtcgtggccc ttgccgacgc cggccggcac gacccgctcg
     2281 atgccggaca gcagcggttc gaggttgtcg ggcagcgcgc tctcggtgac gtcgagctcg
     2341 gcggcgatca tcccgcagcc gatgtcgaca ccgacggccg aggggatcac cgccccccgg
     2401 gtggggatga ccgagccgac cgtcgccccg atgccgacgt gggcgtcggg catcagcgcc
     2461 acgtggcctt ccacgatggg caggcgggcg gtcttctccg cctggcggat cgtctcggga
     2521 tcgacgtcgc tggcccacga cagcagccgg gggttgatcg tctgcggcat ccgtcacctc
     2581 cttcccgcca ttggtacccg atcgacgccc ggcgccgccg gggaatttcc gtcgggtggg
     2641 ggcggcgggc gccagcctgc cagactcggg gccgtggacg acccctacgc gttgcaccgc
     2701 cagcgccgcg ggctgttctc ctccgacgcc gccgcctacg agagcggccg gccgccgtac
     2761 ccggaacggg tctacgccct gctggagcag gtgtgcggcc tcggccccgg caccgaggtc
     2821 gtcgagatcg ggcccggcac cggcctggcg acggcccggc tgctggacca cggcgcgtcg
     2881 gtcaccgccg tcgagctgag cgccgagttc tccgatcgtc tgcgggccaa gttcgccggg
     2941 cgcccgctgc gggtcgtggt cggcgccttc gaggacgtcg ccctcgagcc ggcgtcgttc
     3001 gacctcgccg tggcggcgac ctcgttccac tgggtgccgg ccgacgtcgg cctgcgccgc
     3061 tgcgccgaca tcctccggcc cggcggctgg ctggccctgt ggtggaacca tttcggcgac
     3121 cccgaccgcc cggacccgtt ccgaacggcg ctcaccccga tcttcgagcg gctggcaccg
     3181 tcactggtcg agaccttccc cggcgcggcg ttccaggccg cctccggggc cggcgcccat
     3241 ccgtgggccc tcgacaccgc cgcccgggcg ggcgacatcg aggccagcgg cgggttcggc
     3301 cccgtccggc gggagacgat cgcctggacg ggccgccaca ccgcccccga gctgcggacg
     3361 ctgttcgcct cgttctcacc ctgcctggcg ctcccgccgg accagcgggc cgccgtcctc
     3421 gatgccatcg agcgcctggc cgccgacgag ttcggcggtg tcgtggaacg gccctacctc
     3481 acggtcctct acctcgcctc ccgccggacc tgaccggcgt tcggttcgcc gtcaccgacc
     3541 ccgggcggcc cgcaggacac ggccgatgtc gagcaggtgg tgcgtaccct cgtgcagggc
     3601 gtagcggccg gcgccgagca ccgtgaagac ggcgccgtcg cgccgggaac cggtgcggtc
     3661 ccaaccgccg tcgggcacgg cggccagcgt cgccgacagc cgcgcggcgt tggccgccac
     3721 cgccgccgcc acctcggccg gcgcctgctt ctcgtagccg tcggcctcga cggcggcgtc
     3781 ctggtcccac acggcgaaga ccggcccgtc ctcgtcgagc atgcgcagga tgcggccctc
     3841 gaacaccgtg aggacgtcgc gcacgtggca ggcgtaggcc agcgccgacc actgtcccgg
     3901 ctgcggacgg gcgacgagga tcgactcgtc ctccccgggc aggaaacggg tcagcggcgc
     3961 ctggtagcgc cgccccagcc cggccaccgc cgccggcagg tcggcggcgc tcaccccgtt
     4021 ggggtcgaag gcgcactcgg ggcaccgctc cgactgccag cggggaccga gctcttcgga
     4081 cgtgtcagcc ataccggcac actacgccga gggccccgac gacgctccca gccgttcggc
     4141 caccaccttc tgcaccacct gcggattggc cttgccctgc gacgcccgca ccacctgacc
     4201 gacgaagaag ccggccagcg cggtcttgcc cgcccggtag gcctcgacct tgtcggggtt
     4261 ggcggcgacg acgtcgtcga ccagggcggc gatggcccct tcgtcgctca cctgggccag
     4321 accccggtcg gcgatgatcc gctcggggtc gccaccctgc tccatgagaa cggcgaagac
     4381 ctccttgccg gccggcccgg agatcgtccc ggactccacg gcccgcacca gcgagcccag
     4441 cgccgcggcc gtcatcggca cgtcggacag cggccgctcg ccgagctccc ggggcagctc
     4501 gttgatgatc cagcgggcca cggcaccggc cggggcgccg gcggccaccg cgccctcgaa
     4561 caggtccccg gtggcccggt cgccggtcag gaggtcggcg tcggactcgg agaggccatg
     4621 gaccgccggc caggccgcga accgctcggc gaggacggga tcccgccgcc gggcctcggc
     4681 ccggtactcg gtccggctct tcttcggcgg acgggtgctc accttggccc gcccggcctc
     4741 cgccgcggct tccacggtgg gagcctccgc cttggcggac cacgaatcgc
//
LOCUS       DATGJT010000228         3601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_653081, whole genome shotgun sequence.
ACCESSION   DATGJT010000228 DATGJT010000000
VERSION     DATGJT010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3601
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653081"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /gene="atpA"
                     /locus_tag="VKX24_03910"
     CDS             complement(<1..951)
                     /gene="atpA"
                     /locus_tag="VKX24_03910"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000695329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HLJ07656.1"
                     /translation="MPQIRTDEISSIIRQQIESFDVDLHVDEVGTVLEVGDGIARIHG
                     LEKAMASEMVEFENGSFGLALNLEEDSVGVVILGEYLDIREGQTVKRTGRVLSVPAGD
                     GLVGRVVNPLAQPIDGKGPVDAPHLMPIEGRAPGIAERQPVKEPMMTGIKAVDGMIPI
                     GRGQRELIIGDRETGKSSVAIDAIINQKGTGVICVYVAIGLKASTVAGIVETLREHGA
                     MDYTIIVSATANDPAPMQYIAPYAGCAMAEYYMYEQGRDTLVVYDDLSKQAAAYRQLS
                     LLLRRPPGREAYPGDIFYAHSRLLERSAKLSDERGGGSLTA"
     gene            complement(978..1532)
                     /gene="atpH"
                     /locus_tag="VKX24_03915"
     CDS             complement(978..1532)
                     /gene="atpH"
                     /locus_tag="VKX24_03915"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HLJ07657.1"
                     /translation="MSAVSEAAARVYAKALFELGAGDGALAAMGDDLHAVRDALNGLE
                     GDLRAFFNLPQLRRDDKRRIINLAFAGKIGRPVLGLLNILVEKRREALFDEIVVQFDT
                     MLDRHQGRLQVRVTTARKLDDDLVAALRQAIEQRTSKSVVLHERVDPDVIGGLRVNVG
                     DRVIDGTLRRTLQDMRRSLAARNL"
     gene            complement(1529..2050)
                     /gene="atpF"
                     /locus_tag="VKX24_03920"
     CDS             complement(1529..2050)
                     /gene="atpF"
                     /locus_tag="VKX24_03920"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HLJ07658.1"
                     /translation="MGAAVLLADDNVAGLHLATAVWTWVMFLVTFFVLSKVAWPMLAR
                     KMEERELRIAEGLKKAEEAEARARELMEQQESILAAARADAQKLLADSRAAAENMKND
                     ILRQAQEDIGVERERAKREIELERAKAIDDLKQATIDLTLEASARLLRRELRDEDHRR
                     LAREVVEEVASRL"
     gene            complement(2056..2268)
                     /gene="atpE"
                     /locus_tag="VKX24_03925"
     CDS             complement(2056..2268)
                     /gene="atpE"
                     /locus_tag="VKX24_03925"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013410280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HLJ07659.1"
                     /translation="MGAGIGAGIAAIGAGIGIGRIAGNATESIARQPEAAGDIRGVTI
                     ITAAFIEGVALFAVVVCLLVEGGAVK"
     gene            complement(2394..3173)
                     /gene="atpB"
                     /locus_tag="VKX24_03930"
     CDS             complement(2394..3173)
                     /gene="atpB"
                     /locus_tag="VKX24_03930"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HLJ07660.1"
                     /translation="MFLADVTEDLVDFKLIGGITARQVLLIFCAVFMIVLFTWMSRKV
                     TSKPAKTGVVALLEVALVWVRDEIVYPWLGPERGRRYLPFLWTLFFFILFSNTFGLLP
                     FPVYPGGHTDALVVATGDLAVTGGLAFIAFIVIQASGMKAHGFAKYWADLVPHGVPKF
                     LFPVVWVIEFFGLFTKPFALTVRLFANMTAGHAILAILFSFMYGVAHANKGVIGIPTT
                     IASFGFILFIMVFETLVALIQAYIFTVLTTIFTSLAVAEEH"
     gene            complement(3176..>3601)
                     /locus_tag="VKX24_03935"
     CDS             complement(3176..>3601)
                     /locus_tag="VKX24_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07661.1"
                     /translation="PGARPRQAGPETVTRTATQGLVMIGAFVALLLVTAAAFVKFDGH
                     GLLGTAIGAGLGVLNLALGLLATRRALRVKMSAAVGTVAGGFVLRLLVVVVLMVVFQR
                     TEAVDPAAFALTFMIFFFVYLGVELLMVERSLTPARKAQ"
BASE COUNT          571 a         1167 c         1300 g          563 t
ORIGIN      
        1 ggcggtgagc gagccgccgc cgcgctcgtc ggagagcttg gccgagcgct cgagcagccg
       61 gctgtgggcg tagaagatgt ccccgggata ggcctcccgg cccggcggcc ggcgcagcag
      121 cagcgacagc tggcggtagg ccgccgcctg cttgctcagg tcgtcgtaga ccaccagggt
      181 gtcgcggccc tgctcgtaca tgtagtactc ggccatggcg cagccggcgt agggggcgat
      241 gtactgcatc ggggccgggt cgttggccgt ggccgagacg atgatcgtgt agtccatggc
      301 gccgtgctcc cgcagcgtct ccacgatgcc cgccacggtc gacgccttga ggccgatggc
      361 cacgtagacg cagatgacgc cggtgccctt ctggttgatg atggcgtcga tggcgaccga
      421 cgacttgccg gtctcccggt cgccgatgat cagctcccgc tggccccggc cgatggggat
      481 catgccgtcg acggccttga tgccggtcat catcggttcc ttgaccggct ggcgctcggc
      541 gatgcccggg gcgcggccct cgatcggcat gaggtgcggc gcgtcgaccg ggcccttgcc
      601 gtcgatcggc tgggccagcg ggttgaccac gcggccgacg aggccgtcgc ccgccggcac
      661 cgagagcacc cggcccgtcc gcttcaccgt ctggccctcg cggatgtcga ggtactcgcc
      721 gaggatgacg acaccgaccg agtcctcttc gaggttcagc gccagtccga acgagccgtt
      781 ctcgaactcg accatctcgg aggccatggc cttctcgagg ccgtggatcc gggcgatgcc
      841 gtcgccgacc tcgagcacgg tgccgacctc gtcgacgtgg aggtcgacgt cgaacgactc
      901 gatctgctgg cggatgatgg agctgatctc gtcggtcctg atctgcggca tggcgaatcc
      961 cgttcctatc gttggagcta gaggttcctg gcggcgaggc tgcgccgcat gtcctgcagt
     1021 gtccggcgga gggtcccgtc gatcacccgg tccccgacgt tgacccgcag gccgccgatg
     1081 acgtcgggat cgacgcgttc gtggagtacg acggacttgc tggtgcgctg ctcgatggcc
     1141 tggcgcaggg cggcgacgag gtcgtcgtcc agcttgcggg ccgtggtcac ccggacctgg
     1201 aggcggccct ggtggcggtc gagcatcgtg tcgaactgca ccacgatctc gtcgaagagg
     1261 gcctcgcggc gcttctcgac gaggatgttg agcagcccca gcaccggccg cccgatcttg
     1321 ccggcgaagg ccaggttgat gatgcggcgc ttgtcgtcgc ggcggagctg cgggaggttg
     1381 aagaaggccc gcaggtcgcc ctcgaggccg ttgagggcgt cgcgcaccgc gtggaggtca
     1441 tcgcccatgg cggccagggc cccgtctccg gcaccgagct cgaagagggc cttggcgtac
     1501 acccgggcgg cggcttcgga tacggcgctc acagccggct tgcgacctcc tcgaccacct
     1561 cgcgggccag gcggcggtga tcctcgtcgc gcagttcacg ccgcagcagg cgggccgacg
     1621 cctcgagggt gaggtcgatg gtggcctgct tcaggtcgtc gatggccttg gcccgctcga
     1681 gctcgatctc ccgcttggcc cgctcccgct cgacgccgat gtcctcctgc gcctggcgga
     1741 ggatgtcgtt cttcatgttc tcggccgcgg cccggctgtc ggccaggagc ttctgggcgt
     1801 cggcccgggc ggcggccagg atgctctcct gctgttccat cagctcgcgg gcccgggcct
     1861 cggcctcctc ggccttcttc agcccttcgg cgatccggag ctcgcgctcc tccatcttcc
     1921 gggccagcat gggccaggcg accttgctca gcacgaagaa ggtcacgagg aacatcaccc
     1981 aggtccacac ggcggtggcc aggtggaggc cggcgacgtt gtcgtcggcg aggagtaccg
     2041 cggcgcccac cggcgtcact tcaccgcccc gccctcgacg agcaggcaga cgaccacggc
     2101 gaacagggcg acgccttcga tgaaggcggc ggtgatgatc gtgacaccgc ggatgtcgcc
     2161 ggccgcttcg ggctggcggg cgatcgattc ggtggcgttg ccggcgatcc gcccgatgcc
     2221 gatgccggct ccgatggcgg cgattccggc cccgatgccc gcgcccatga ggccgaagcc
     2281 ccagaactgg cctccgctgg caatggcgac gagggggacg agaagcgctg agtgcatgga
     2341 tcgattctcc tgttcgtttc tagttctgcc tcgggggagg caggtgaagc tccctagtgt
     2401 tcttcggcca cggccaggct ggtgaagatg gtcgtgagca cggtgaagat gtaggcctgg
     2461 atgagggcga ccaaggtctc gaaaaccatg atgaagagga tgaagccgaa cgaggcgatg
     2521 gtggtcggaa tgccgatgac gcccttgttg gcgtgcgcca cgccgtacat gaagctgaag
     2581 aggatcgcca ggatggcgtg accggccgtc atgttggcga agagacggac ggtcagggcg
     2641 aagggcttcg tgaacaggcc gaagaactcg atcacccaca ccacggggaa gaggaacttc
     2701 ggcacgccgt gggggacgag atcggcccag tacttggcga agccgtgggc cttcatgccc
     2761 gacgcctgga tcacgatgaa ggcgatgaag gccaggccgc cggtgacggc caggtcgccg
     2821 gtggcgacga cgagcgcatc ggtgtggccg cccgggtaca cggggaacgg cagcagcccg
     2881 aacgtgttcg agaacaggat gaaaaagaac agcgtccaga ggaacgggag gtagcgccgg
     2941 ccccgctccg ggccgagcca ggggtagacg atctcgtcgc ggacccagac cagcgccacc
     3001 tcgagcaggg ccacgacccc cgtcttcgcc ggtttgctgg tgactttccg ggacatccac
     3061 gtgaacagca cgatcatgaa gacggcgcag aagatcagca gaacctggcg ggcggtgatg
     3121 ccgccgatca gcttgaagtc gacgaggtct tcggtgacgt cggccaggaa cacggttact
     3181 gcgcctttcg ggccggggtg agcgatcgct cgaccatcaa caactcgaca ccgagataga
     3241 cgaagaagaa gatcatgaac gtcagcgcga aggccgccgg gtcgacggcc tccgtccgct
     3301 ggaagacgac catcagcacg acgacgacca gcaggcggag gacgaagccg ccggccacgg
     3361 tgcccacggc ggcgctcatc ttcactcgca gggcccgccg ggtggccagc aggccgagcg
     3421 ccaggttgag gacgccgagg ccggcgccga tggccgtgcc cagcagcccg tggccgtcga
     3481 acttgacgaa ggcggcggcg gtgacgagca ggagggcgac gaaggcgccg atcatcacca
     3541 ggccctgggt ggcggtgcgc gtcacggttt cgggccctgc ttgtcggggc cgagcacctg
     3601 g
//
LOCUS       DATGJT010000229         3451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_444998, whole genome shotgun sequence.
ACCESSION   DATGJT010000229 DATGJT010000000
VERSION     DATGJT010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444998"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VKX24_03940"
     CDS             complement(<1..271)
                     /locus_tag="VKX24_03940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07662.1"
                     /translation="MQARPSSRARRRRRVRARRLLVVGLLLVVVGVGAGVLLVSGGPG
                     PKHDGGPPSSTSSSTSSSTTTTAPVLRSDGTFQVATTALAIEEPVG"
     gene            381..1085
                     /locus_tag="VKX24_03945"
     CDS             381..1085
                     /locus_tag="VKX24_03945"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ07663.1"
                     /translation="MAISHPARAQRRVWDGRADSWDEVAESSLTAVVEAVLRAAHPRP
                     GTTAVDLGSGSGQLSLPLARAGLEVTAVDVSPKMIDHLQERARRERIEGVTTVVAAVE
                     GFRLPEGSVDLVVSNYALHHLRDRDKREVVAAAARWLRPGGRLVVGDMMFGRGSASHD
                     RTVIKGKLVVLLRRGPAGWWRVMKNVVKFGLRIGERPVPMERWTRYFEEAGLTAVSGS
                     RVVAEAAVVLGVKPQD"
     gene            complement(1114..1896)
                     /locus_tag="VKX24_03950"
     CDS             complement(1114..1896)
                     /locus_tag="VKX24_03950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07664.1"
                     /translation="MTEVRRCVVSLATDRAFYPSGLERLKTTLRETGFGGEFRSWPPG
                     SFPADCPTHLEVPFAFKPFCLAESRANGGDTLLWLDSSCVVVESLDPLFETIEANGYV
                     LFRNGRNVVGEWSSDLALSEYGLSREDALAIPEVNACALGLNLHAPIAVQFLEAWHDA
                     ALREIPFRGTPERLESWNDYRDVKWNRSGRISADRRVRGHRHDQTVASILARRLGMEL
                     TAEGVEGYTEGRELRPTTVIAVDRRLRLQTGAGTDPEPATDL"
     gene            2003..2914
                     /locus_tag="VKX24_03955"
     CDS             2003..2914
                     /locus_tag="VKX24_03955"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ07665.1"
                     /translation="MPTDRFVEARDGVPLAVRDHGGEGPPLLLMHGAGIHLLSLERLA
                     ARLRPFRVVTMDQRWSGQSGDSPSYSWDDLVSDVEVVIDDLGLDNPAVGGHSWGGMIS
                     AFYGAAHPEAPAVINLDGHGSGDPSLYDGLPPEEVGAKRAELEAAMEDTEPKEGDDAW
                     KALARERLRAQNLALGVPEDEVDEFTDRSFLSERPGHWRQRPGPALMEGLRGDQRMFD
                     VYRSVECPLLVVLAPALPPVVPEFAVPLMEAYRRGLAKAFADLARERPTVRVVTLDGV
                     DHQSIAGRHAVVVAAAMTAFLSDVGYG"
     gene            2928..3308
                     /locus_tag="VKX24_03960"
     CDS             2928..3308
                     /locus_tag="VKX24_03960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07666.1"
                     /translation="MDRTATIIRAYERWDAGDINGFLDLFDDEAIFVVPGATTVSGDH
                     DKASFRGVLARVAEATRAGRHRQELVCTYLSDSGATLVFDNYFGPGEHDNYHSIHEWI
                     FRGDRPHVWMLYVHEYDRFERLWG"
BASE COUNT          517 a         1188 c         1227 g          519 t
ORIGIN      
        1 cgccgacggg ctcctcgatg gccagggccg tcgtggccac ctggaaggtc ccgtcgctcc
       61 tcagcacagg cgcggtcgtg gtggtgctcg aggaggtgga ggagctggtg gacgagggtg
      121 ggccaccgtc gtgcttcgga cccggccccc cgctgacgag gagcacgccc gcgccgacgc
      181 cgacgaccac cagcaggagc ccgacaacga ggaggcgtct ggcgcggacc cgccgacgac
      241 gccgcgcccg tgacgacggc cgcgcctgca cgaccggagc gtacctgcgg ctccaggggc
      301 gacaggggct cgcgcggcgc cttggtgcgg tgacgggctt ccttcatgtg gccgtcagct
      361 ggcccgttca ctattgaggg gtggccatct ctcaccccgc cagagcccag cgtcgggtct
      421 gggacgggcg tgccgactcc tgggacgagg tcgccgaaag ctccctgact gcggtcgtcg
      481 aggccgtcct gcgggcggcg cacccccggc cggggacgac ggcggtggac ctcgggtcgg
      541 gctccggtca gctcagcctg cccctggcca gggccgggtt ggaggtgacg gcggtcgacg
      601 tcagcccgaa gatgatcgac cacctgcagg agagggcgcg gcgcgaacgg atcgaaggcg
      661 tcacgacggt ggtggccgcg gtcgagggct tccgtctgcc ggagggcagc gtcgacctcg
      721 tcgtctccaa ctacgcgctc caccacctgc gcgaccgcga caaacgcgag gtcgtcgcgg
      781 cggcggcccg atggttgcga ccgggcggtc gcctggtggt cggcgacatg atgttcggcc
      841 gaggctcggc gtcccacgac cggacggtga tcaagggcaa gctcgtcgtg ctgctccgcc
      901 gaggcccggc tggttggtgg cgggtgatga agaacgtggt caagttcggg ctccgcatcg
      961 gcgagcggcc ggtgccgatg gaacggtgga cgcggtactt cgaagaggcc gggctcaccg
     1021 cggtgtcggg gtcgagagtc gtggccgaag ctgcagtggt gctcggcgtc aagccccaag
     1081 actgactcgg gcgatcggga cggacgcgtt cggctagagg tccgtagccg gctcgggatc
     1141 ggtgcctgct ccggtctgca ggcgcagacg tcggtcgacg gcgatcacgg tcgtcggtcg
     1201 aagctcacgc ccctcggtat acccctcgac gccttcggca gtgagttcca tccccaatcg
     1261 acgggcgaga atgctcgcga cggtctggtc gtgtcgatgt ccgcgcacgc gccggtcggc
     1321 agagatccgc cctgaccggt tccacttgac gtcccgatag tcgttccagc tctcgagcct
     1381 ctccggtgtt cctcggaacg ggatctcacg caacgcggcg tcgtgccacg cctcaaggaa
     1441 ctggactgcg atcggagcgt gcaggttcaa cccgagggcg caggcattca cctcggggat
     1501 cgccagggca tcctcccggg acaacccgta ctcggacaag gccaggtcac tactccactc
     1561 tccgacgaca ttgcgcccgt tcctgaagag cacgtagccg ttcgcctcga tggtctcgaa
     1621 cagggggtcg agcgactcga ccacgacaca agaggagtcc agccagagga gtgtgtctcc
     1681 gccgttggct cgcgattcgg ccaggcagaa gggcttgaag gcgaagggga cctcgagatg
     1741 agtggggcaa tccgcgggga agctgcccgg cggccaggac cgaaactctc ccccgaaccc
     1801 ggtctcccgc aacgtcgtct tcaagcgctc cagacccgac gggtagaacg ctcggtcggt
     1861 cgccaggctc acgacacagc gccgcacctc ggtcacgacg ccggcgcctc gtccgccagc
     1921 agctgggcgt ctcgaaggtc cgcggccagt gctccatcgt cgcggccggt ccccgacacg
     1981 gcgggaacac tatgttcctg acgtgcccac cgaccgcttc gtcgaggcgc gagatggggt
     2041 gccgctcgcc gtgcgcgacc acggcggtga gggtccgccg ctgctgctca tgcacggagc
     2101 cggcatccac ctgctgtcgc tcgagcgcct ggcggcccgt cttcgcccct tccgggtcgt
     2161 gaccatggac cagcgatggt cgggtcaatc cggggactcc ccgagctact cctgggacga
     2221 cctcgtgagc gacgtggagg tcgtcatcga cgatctcggg ctcgacaacc cggccgtcgg
     2281 cggccactcc tggggcggca tgatctccgc cttctacggc gccgcgcacc cggaggcgcc
     2341 ggcggtcatc aacctcgacg gtcacgggtc cggcgacccc tccctctacg acgggctgcc
     2401 gcccgaggag gtgggggcca agcgggccga gctcgaggcg gccatggagg acaccgagcc
     2461 caaggagggt gacgacgcgt ggaaggcgct ggcccgcgaa cgcctgcgcg cccagaacct
     2521 cgccctcggg gtgcccgagg acgaggtcga cgagttcacc gaccggagct tcctgtccga
     2581 gcggcccggg cactggaggc agcgaccggg tcccgccctc atggagggac tgcggggcga
     2641 ccagaggatg ttcgacgtct accgctcggt cgagtgcccg ttgctcgtcg tcctcgcccc
     2701 ggcgctcccc ccggtcgtcc cggagttcgc ggtccccctc atggaggcgt accgccgcgg
     2761 gctcgccaag gcgttcgccg acctcgcccg tgaacggccg acggtcaggg tggtgacgct
     2821 cgacggagtc gatcatcagt cgatcgcggg ccgccacgcg gtggtcgtgg ctgcagctat
     2881 gaccgcgttc ttgagcgacg tgggctatgg ctgaacagga gaacccgatg gaccggacgg
     2941 ccaccatcat ccgggcctac gagcgctggg acgccgggga catcaacggc ttcctcgacc
     3001 tcttcgacga cgaggcgatc tttgtcgtgc ccggcgcgac cacagtctct ggggaccacg
     3061 acaaggcctc gttccgagga gtcctcgccc gggtggccga ggcgacgcga gcggggcgac
     3121 accgtcagga gctggtgtgc acgtacctca gcgacagcgg ggcgacgctc gtcttcgaca
     3181 actacttcgg cccgggcgag cacgacaatt accactccat ccacgagtgg atcttccgag
     3241 gcgatcgtcc gcacgtgtgg atgctctacg tccacgagta cgaccgcttc gagcgcctgt
     3301 gggggtgagc caccgctcct gacgggatcg ccgtcgggcc cctcgaccgt gggcggcccg
     3361 aaccggtggc gcgacggccc ggtgccacac ttgaggccgt gttcgagctc gaccgtttcg
     3421 ccgagaccgg cgtgctccat ctgcccgagg c
//
LOCUS       DATGJT010000230         5163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1068288, whole genome shotgun sequence.
ACCESSION   DATGJT010000230 DATGJT010000000
VERSION     DATGJT010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5163
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068288"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VKX24_03965"
     CDS             <1..667
                     /locus_tag="VKX24_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07667.1"
                     /translation="IRPTNMEEQYPPPVLDLMGWDAEVWQGAAPPQYPCLIDQRHEVS
                     RLYGMVNVPTAVWIDEDGRIVRPPEPAGVNEGFRHLDLATFSMPADAVEAGVRLRRRY
                     FDAVRDWVRRGADSPAVLPPEEVRRRMGRGARWGNPARAAAHLRVAEALYRRKDPDAA
                     QAHFAEAARLWPENWAYQRQARQLSDPAAVGELDAGPDFWRSVEQRGEGSYYPPVDIP
                     DTV"
     gene            complement(634..1596)
                     /locus_tag="VKX24_03970"
     CDS             complement(634..1596)
                     /locus_tag="VKX24_03970"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLJ07668.1"
                     /translation="MSAVATAVSPAGTVRADRHRRAGLAACLVSAGGFGALPVLGKAA
                     YDAGLGPLALLWGRFGLAAIAFWLLVAFVVKPSRPPVGLVVAGLLMGALGYAVEAGLF
                     FAALERVDASLVELLLYAYPAVVTAVALGSGRETPAPRLLAALALASLGVVGVFAGSL
                     AGGVDPAGLALGLGAAAVYAGYVLTGERVVAAVHPVLLAALVATGAAAAFTVAGLVRG
                     GLPHPRTAGAWTAVAVIAVVATVIPMAGLFAGIERVGAPTASIVSTFEPVVTVVLAGV
                     FLGERLSLVEAAGAACVIAAVRLLARRPEPAGEAQTVSGMSTGG"
     gene            complement(1593..3062)
                     /locus_tag="VKX24_03975"
     CDS             complement(1593..3062)
                     /locus_tag="VKX24_03975"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HLJ07669.1"
                     /translation="MDDTGRIRRPLTPTARRIVFGEPAAGPPELRLVTQVDRAHLVML
                     SERSLVDAAAAAAVLVEIELLRATGFEPLDGLEARRGRYLLYEDWLAARLGERVAGIL
                     RTGRSRNDLNATVLRLRLRSPVERLLTEVLRLQAVLLNRARRQAGTVMPGYTHYQPAV
                     PTTYGHYLGGVARAVDRDLAALAAAAAGLDGCPLGAGTGHGSALPIDPARTAVLLGFE
                     RPELQALDAVASRDVVLRLLAAAAVFGVTASRLAADLLLWTTAEFAFLELPDELVGSS
                     SAMPQKRNPFLLEHVQGRSSRAAGSFVAAMTAMHATPFANSVAVGTEACAGAVEALEA
                     TADCAALLRLVVAGATPRPSAMLARAVAGRTTATARAERLMIQEGLSFREAHRLVGAR
                     LTEADRRSSLTPVHDARPDGGDSVDPASVVGAARFGGGPGAPPVLDDLRDRRAAVAAE
                     LAQRLGRQRRAEINLAAAVAAVIASGGITPVSPLVGRPA"
     gene            complement(3064..4374)
                     /locus_tag="VKX24_03980"
     CDS             complement(3064..4374)
                     /locus_tag="VKX24_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017240931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HLJ07670.1"
                     /translation="MAALEPAATRRRRPLRGSGVTSPPGVGDRPVLAMVESNTTGTGR
                     MFAVAARSRGLRPVLLGRRPERYRWVAEDGVEAARADTTDPESVVAVARAVAGPAGVA
                     GVVTSSEYFVAVAARAARRLRLPGADPAAVDRCRDKRRQRAALAGAGIPVPAWAAAGT
                     PQAAVAAAAAIGYPVVVKPADGTGSRGVRLCGDAAEVLGHTGALLTVGRDERGHPSLP
                     AVLVEEYIAGPEFSVETFAMDVVGLTAKHLGPLPSFVETGHDFPAAPPEPAGAVARAA
                     IAALGLGFGPAHTEVRLGPRGPVVVEVNARLAGGRIPTLVRLATGVDLIGATVDAVTG
                     FDGGGRPLPEPGPGHASIRFLVAEAAGRVRRTGGVAAAAAVPGVVDVAFSVRPGQHVG
                     GTGSFLDRVGHVITAGPTAAAATIAADTALAHLELDLDAAVGVA"
     gene            complement(4314..>5163)
                     /locus_tag="VKX24_03985"
     CDS             complement(4314..>5163)
                     /locus_tag="VKX24_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HLJ07671.1"
                     /translation="FGLALAMECRLRGRPLVLVSDPAVDPRLRRRMRDLGAAVDIVAR
                     PAAVGGYQQARLDRLAELRDRHPRHFLPAQYSNPDNPGAYELLADELAATLGWVDVLV
                     GPVGSGGSICGTVAGLRDLLGGDVAAVAVDTPGSVLFGQRDAPRRLRGLGNSLMPPNL
                     DHPAIDEVHWVSDREAFAATRALHRRHALYMGPTSGAAWLVARWKARLEPDARTVVLL
                     PDEGHRYQDTVYDDAWLRQEGLSLRRLAARPVEVDRPADAGPEWSWLRWNRRRLDAVV
                     PCGAAA"
BASE COUNT          691 a         1964 c         2000 g          508 t
ORIGIN      
        1 gatccggccg acgaacatgg aggagcagta cccgccgccg gtcctcgacc tcatgggttg
       61 ggacgccgag gtctggcagg gggccgcccc gcctcagtac ccctgtctga tcgaccaacg
      121 ccacgaggtg tcgcggctct acggcatggt caacgtcccc accgcggtgt ggatcgacga
      181 agacgggcgg atcgtccgcc ctcccgagcc ggccggggtc aacgaagggt tccgccacct
      241 cgacctcgcc acgttctcga tgccggccga cgccgtcgag gccggtgtcc ggctccggcg
      301 gcggtacttc gacgccgtgc gggactgggt tcgccgcggc gccgacagcc ccgccgtcct
      361 cccgccggag gaggtccggc gccggatggg gcggggagcg cggtggggca acccggcccg
      421 ggccgccgcc cacctgcggg tggccgaggc gctctatcgc cggaaggacc ccgacgccgc
      481 ccaggcccac ttcgccgagg ccgcccggct ctggccggag aactgggcct accagcgcca
      541 ggcccggcag ctgtccgatc cggccgcggt gggcgagctc gacgccgggc cggacttctg
      601 gcggtcggtg gagcagcgcg gcgaagggtc ctactatccg ccggtcgaca tccccgacac
      661 cgtctgagcc tcgcccgccg gttccggacg ccgggccagg aggcggacgg cggcgatcac
      721 gcaggcggcg ccggccgcct ccaccagcga cagcctctcg ccgaggaaca ccccggccag
      781 cacgacggtg acgaccggct cgaacgtgga gacgatgctg gccgtcggag cgccgacccg
      841 ctcgatgccg gcgaagagcc cggccatggg gatcacggtg gcgacgacgg cgatcacggc
      901 cacggccgtc caggcgccgg ccgtccgggg atgggggagc ccgccgcgga cgagcccggc
      961 aacggtgaag gcggccgcgg cgccggtggc cacgagggcg gcgagcagca ccggatggac
     1021 ggcggccacg acccgttcgc cggtcaggac gtagccggcg tagaccgccg ccgcgccgag
     1081 tccgagggcg agcccggccg ggtcgacgcc gccggccagc gagccggcga acacgccgac
     1141 gaccccgagg ctggccagcg ccagcgcggc cagcaggcgg ggcgccggcg tttcccggcc
     1201 tgacccgagc gccacggcgg tgacgacggc cggataggcg tagagcagca gctcgaccag
     1261 cgaggcgtcg acgcgttcca gagcggcgaa gaacaggccg gcctcgacgg cgtagccgag
     1321 cgcgcccatc aacaggccgg ccacgaccag accgaccgga ggccgggagg gcttgacgac
     1381 gaaggcgacg aggagccaga aggcgatcgc cgccagcccg aagcggcccc acagcaacgc
     1441 cagcgggccg agcccggcgt cgtaggccgc cttcccgagg acgggcagcg ctccgaaccc
     1501 ccccgcggac accaggcagg ccgccagtcc ggcccggcgg tgtcgatcgg cccgcaccgt
     1561 tccggcggga gacaccgcgg tcgccaccgc gctcatgcgg gccgcccgac caacggcgaa
     1621 accggggtga taccgcccga ggcgatgacc gccgccacgg cggcggcgag gttgatctcg
     1681 gcccgccgct gccggccgag gcgctgagcg agctcggcgg cgacggcggc tcggcgatct
     1741 cggaggtcgt cgagaaccgg gggagcgccc ggcccgccgc cgaaccgcgc cgccccgacg
     1801 accgacgccg gatcgacgct gtcgccgccg tccggtcgtg cgtcgtgcac cggcgtcagc
     1861 gaggaacgcc ggtcggcctc ggtcagccgg gcaccgacga gccggtgggc ctcacggaac
     1921 gacaggcctt cctggatcat caggcgttcg gcccgggcgg tggccgtggt ccggccggcg
     1981 acggcccggg ccagcatggc cgacggccgc ggcgtcgccc cggcgacgac gaggcgcagg
     2041 agagcggcgc agtcggcggt ggcctccagg gcctcgacgg cgccggcgca ggcctcggtg
     2101 ccgacggcca ccgagttggc gaacggtgtg gcgtgcatgg cggtcatggc ggcgacgaaa
     2161 ctaccggcgg cccggctcga gcgcccctgc acgtgctcga gcaggaaggg gttgcgcttc
     2221 tgcggcatgg cggagctcga cccgacgagc tcgtcgggca gttccaggaa ggcgaactcg
     2281 gccgtcgtcc acagcagcag gtcggcggcc agccgggagg cggtcacgcc gaacacggcg
     2341 gcggcggcca gcagccggag cacgacgtcg cgcgacgcca cggcgtcgag ggcctggagt
     2401 tccgggcgct cgaagccgag caggacggcg gtgcgggcgg ggtcgatcgg cagcgccgag
     2461 ccgtgacccg tgccggcgcc gagcgggcag ccgtcgagcc cggcggcggc cgccgccagc
     2521 gccgcgaggt cgcggtcgac cgcccgggcc acgccgccga ggtagtgccc gtaggtggtc
     2581 ggcacggccg gctggtagtg ggtgtagccc ggcatcaccg tcccggcctg ccggcgggcc
     2641 ctgttgagga ggacggcctg gagccggagg acctcggtca gcagccgctc caccggcgac
     2701 cgcaaccgca gccgcaggac ggtggcgttg aggtcgttgc gggaccggcc cgtccgcagg
     2761 atcccggcga cccgctcgcc gagccgggcg gccagccagt cctcgtagag gaggtagcgc
     2821 ccccggcggg cctcgagccc gtcgaggggc tcgaaaccgg tggcccggag cagctcgatc
     2881 tccaccagga cggcagccgc cgccgcggcg tccacgagcg atcgctcgct cagcatgacg
     2941 aggtgggccc ggtcgacctg cgtcaccagc cggagctccg ggggaccggc cgccggctcg
     3001 ccgaacacga tgcggcgggc cgtcggggtg aggggccggc ggatgcgccc ggtgtcgtcc
     3061 atgtcaggcc actcccaccg cggcgtcgag gtcgagctcc aggtgggcca gcgccgtatc
     3121 ggcggcgatg gtggccgccg ccgcggtcgg gccggcggtg atgacgtggc cgacccggtc
     3181 gaggaacgac ccggtccccc cgacgtgctg ccccggtcgc acgctgaagg cgacgtcgac
     3241 gacgcccggc acggcggccg ccgccgccac cccgcccgtc cgccggaccc ggccggccgc
     3301 ctcggcgacg aggaaccgga tcgaggcgtg gccggggccc ggctcgggca gcggacggcc
     3361 gccgccgtcg aatccggtga ccgcatcgac ggtggcgccg atgaggtcga cgccggtggc
     3421 cagccgcacc agcgtcggga tccgcccccc ggccagccgg gcgttcacct cgaccaccac
     3481 cgggccccgg gggccgaggc ggacctcggt gtgggccggc ccgaacccga gccccaatgc
     3541 cgcgatcgcc gcccgcgcca cagccccggc cggctctggt ggcgcggcgg ggaagtcgtg
     3601 gccggtctcc acgaacgacg gaagaggacc gagatgcttg gccgtcagtc ccaccacgtc
     3661 catcgcgaat gtctcgaccg agaactcggg gccggcgatg tactcctcca cgagcacggc
     3721 gggcaggctg gggtgaccgc gctcgtcccg gccgaccgtc aacagcgcgc ccgtgtgccc
     3781 gagcacctcg gcggcgtcgc cgcacaggcg gacgccgcgg ctgcccgtgc cgtcggccgg
     3841 cttgacgacc accgggtatc cgatggccgc cgcggcggcc accgctgcct gcggggtgcc
     3901 ggcggccgcc caggccggca ccggaatccc ggccccggcc agcgcggctc gctggcgacg
     3961 cttgtcgcgg cagcggtcca ccgcggcggg gtcggccccg ggcagccgca gccgccgagc
     4021 cgcccgcgcc gccaccgcga cgaagtactc ggaactggtg accacgccgg ccacgccggc
     4081 cggcccggcc accgcccggg ccaccgccac cacggattcg ggatcggtgg tatccgcccg
     4141 ggccgcttcg acgccgtcct ccgccaccca gcggtagcgc tccgggcgcc ggccgagcag
     4201 caccggccgg agcccccggg accgggcggc gacggcgaac atccggcccg tccccgtcgt
     4261 gttgctctcg accatggcca gcaccggccg gtcgccgacg cccggcggtg acgtcacgcc
     4321 gctgccccgc aggggacgac ggcgtcgagt cgccgccggt tccagcgcag ccacgaccac
     4381 tccgggccgg cgtcggcggg gcggtcgacc tccaccggcc gggcggccag ccggcgcagc
     4441 gagagccctt cctgccgcag ccaggcgtcg tcgtagacgg tgtcctggta gcggtggccc
     4501 tcgtcgggca gcagcacgac cgtccgggca tcgggctcga ggcgggcctt ccaccgggcc
     4561 accagccagg ccgctccgct ggtcgggccc atgtagaggg cgtggcggcg gtgcagcgcc
     4621 cgggtggcgg cgaaggcctc ccggtcgctc acccagtgga cctcgtcgat ggccgggtgg
     4681 tcgaggttgg gcggcatcag gctgttgccg agcccccgga ggcggcgagg ggcgtcccgc
     4741 tggccgaaga gaacagagcc cggggtgtcg accgccaccg ccgcgacgtc cccgcccagc
     4801 aggtcccgga gaccggcgac ggtgccgcag atggaccctc ccgagccgac ggggccgacg
     4861 aggacgtcga cccagccgag cgtggccgcc agctcgtcgg ccagcagctc gtaggcgccg
     4921 gggttgtcgg ggttcgagta ctgggcgggc aggaagtggc ggggatggcg gtcccgcagc
     4981 tcggccagcc ggtccagccg ggcctgctgg tagccgccca ccgccgccgg acgggcgacg
     5041 atgtcgacgg cggcgcccag gtcgcgcatc cggcgccgga gacgggggtc gacggccggg
     5101 tcgctgacca ggaccagcgg ccggccccgc agccggcact ccatggccag cgccagcccg
     5161 aac
//
LOCUS       DATGJT010000231         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_861543, whole genome shotgun sequence.
ACCESSION   DATGJT010000231 DATGJT010000000
VERSION     DATGJT010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861543"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            352..561
                     /locus_tag="VKX24_03990"
                     /pseudo
     CDS             352..561
                     /locus_tag="VKX24_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006242254.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
     gene            complement(651..>2067)
                     /locus_tag="VKX24_03995"
     CDS             complement(651..>2067)
                     /locus_tag="VKX24_03995"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HLJ07672.1"
                     /translation="VTARADMVLEEFDGEGFVAALLEAPPVAVALLRQFAGRLRAADR
                     LPMAPMTRPRPRPSAPPRSTVVGVMQPRQFDPGVEGYFDDPYPQLAALREQAPVHWSE
                     VISSWVVTRYEDVHRLSRDRSLLGSVGTLDPAAALTGQASEAHRRRRLEKTMTRRDGD
                     DHLRLRRLVSTVFTPRALGRWKDRADRIVEELLAAAADKETIDVMSEFALPLPVRIIS
                     EMLGMPAADTGRLRDWSRALTRGLDPSLSAQEDEAAAAAGQAMFAYVGQVVADKRKDP
                     GDDILSALIEAEEGGDRLTTEEIQAQVMTLYVAGHETTANLIGNGVISFFRFAEQMDR
                     LRADPGLDANAVEEVLRYDSPAQFTRRVNRVPLEVGGVTIPAGSLLTLALGSANRDPL
                     KWGPTADVLDVARPGANEHVAFGGGAHYCLGNALARLETRAALPRLVRRFPRMQPATA
                     DPAWMQRITLRGVETLPVVLC"
BASE COUNT          305 a          709 c          741 g          312 t
ORIGIN      
        1 gcgccgccgt gctggtcgcc gcggcaagca tctcgcttca gtgcctcgac gctgaccgtg
       61 caacctccag ggcaggcgat cagaccgctc catcagaacg tccatatcgt ccgcggcgta
      121 cgagccgacc gccgggaggt cctggtgcgc agcgtgctga tcgactggga tgggcgccgt
      181 gccagtgcgt ccaccgagtt gaccgacgcc gacgggtacg tcattgcccg gggtcagcag
      241 atcgccatgc cggctccggg gagccacacc acaggaggct ggccggcgga gcgccttgtc
      301 gccacggtgc tcttcaccga cattgtcggc tcgaccgagc aagcggagcg cctgggactc
      361 gaggtgcggg cggggctgca cacgggcatc gccgtccaca tcgcctctcg ggtccagggg
      421 ctggcccgcc cgggagagat cctcgtgtcg ggcacggtct gtgatctcgt cactgggtcg
      481 ggattgcggt tcggagaccg aggccggcac cgcctgaagg gcctggacgg cgactggcag
      541 ctccacgccc tcgaagcgtg actcgatact cccgtcggac gccgggagcc ggacgccggt
      601 gattggcgtc catcggctgg acccgacggc gtgatcgttc cggctctggg tcagcagagg
      661 acgacgggga gcgtttcgac gccccgcagc gtgatgcgct gcatccaggc cggatccgca
      721 gtggcgggct gcatacgggg gaaccgtcgc acgagcctcg ggagggcggc ccgggtctcc
      781 agcctcgcca aagcgttgcc caggcaatag tgggcgcctc ctccgaaggc gacgtgctcg
      841 ttggcgccgg gtcgggcgac gtccaggacg tcggccgtgg gcccccactt gagcggatcg
      901 cggttggccg agcccagcgc cagggtcaac aggctccccg ccgggatggt gacgccaccg
      961 acctccagcg gaacacgatt gacccgccgg gtgaactgcg ccggactgtc gtagcggagc
     1021 acttcctcga cggcgttcgc gtcgagaccg gggtcggccc ggaggcggtc catctgctcg
     1081 gcaaagcgga agaagctgat caccccgttc ccgatcaggt tggccgtcgt ctcgtggccg
     1141 gcgacgtaga gcgtcatcac ctgggcctgg atctcttcgg tcgtcagacg gtcgcctccc
     1201 tcctccgcct cgatcagggc actgagaatg tcatcgcccg ggtctttgcg cttgtcggcg
     1261 acgacctgcc cgacgtaggc gaacatggct tgcccggcgg cggccgccgc ctcgtcctcc
     1321 tgcgccgaga gcgacggatc gagtcctctc gtcagagccc gggaccagtc ccggagccgc
     1381 ccggtgtcgg ccgcgggcat gccgagcatc tcggagatga ttcggaccgg aagggggagc
     1441 gcgaactcgc tcatcacgtc gatggtctct ttgtcggcgg cggcggcgag gagctcttcg
     1501 acgatgcgat cagccctgtc cttccagcgg ccgagggccc ggggcgtgaa gaccgtggat
     1561 accagccggc ggagccgcag gtggtcgtcg ccgtcgcggc gggtcatggt cttctccagc
     1621 cgccggcggc ggtgggcttc cgacgcctgc ccggtcaggg cggccgccgg gtccagcgtg
     1681 ccaaccgatc cgagcaaaga tcggtcccgg ctgaggcggt ggacgtcctc gtagcgggtc
     1741 accacccagg agctgatcac ctcggaccag tgcaccggcg cttgctcccg cagtgccgcc
     1801 agttgagggt agggatcgtc gaaatagccc tcaacgcccg gatcaaactg ccgtggctgc
     1861 atgacgccga ccacggtcga ccgtggcgga gcggacggcc gcggccgcgg ccgcgtcata
     1921 ggcgccatcg gcaatctgtc ggcggcccgc aggcggccgg cgaactggcg gagcagggcc
     1981 acggccacgg gcggagcctc gagaagcgcg gcgacgaagc cttcgccgtc aaactcctcg
     2041 agcaccatgt ctgccctggc agtgacc
//
LOCUS       DATGJT010000232         2394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_238437, whole genome shotgun sequence.
ACCESSION   DATGJT010000232 DATGJT010000000
VERSION     DATGJT010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238437"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VKX24_04000"
     CDS             complement(<1..389)
                     /locus_tag="VKX24_04000"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HLJ07673.1"
                     /translation="MRPPEPPADDWIELSEDVLPAAEAMEWAALPQCGGVVCFAGTVR
                     DSSEGRPGVKALTYEAYEEQAVVKLKEVAAECRRRWPDVVRIALLHRTGRLELTEASV
                     IVVASTPHRADAFAAAKYCIDTLKETVP"
     gene            491..1690
                     /locus_tag="VKX24_04005"
     CDS             491..1690
                     /locus_tag="VKX24_04005"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLJ07674.1"
                     /translation="MEPDDEDELEAFRSPDDRERIWLHPSELGSLLPPVRDPARPGRR
                     RRRPWRRLRALTVPVLSGMIGAALCVGVLALAGGLDHSADRVVERVTNQPAYDLGAPD
                     GIAALAAAVAPSIVALRATTPNGDRFGSGVIFRSDGHVLTNFHLVDGATSIEVTCADG
                     RSWAAQPAGTDFESDLAVLSVTDSHVMEPAVLGTARSLKVGQTAIVVGAPAGPQGSPS
                     VTAGVIAGLGEVVEVAGHPLYDMISTDAMIGPRASGGPLVDRNGAVVGITTRTGAGDD
                     SLGLVVPIDLARKVAEKLITAGRVAWPWLGVSGTDLDPWTAKEYGVATGTLIRRVTPK
                     SPADVSGLKVQDVVTAVENLPISTMNELMMLVRRHEPGDRVDLTVVRSGVTRHVKVRL
                     AESPDGR"
     gene            1945..>2394
                     /locus_tag="VKX24_04010"
     CDS             1945..>2394
                     /locus_tag="VKX24_04010"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HLJ07675.1"
                     /translation="MGDTPVAASDLTGATLLSDSELVLRARQGDRRSFGTLYLRHHDA
                     AWRVACAAAGSPTDAEDAVAEGFAKVFAALPRMVESDLAFRPYLLACVRNAAIDGKRR
                     ERRVDLTDDVPDDVADPDGPDEIVLADLERNLVGEALRSLPERWRTIL"
BASE COUNT          312 a          922 c          831 g          329 t
ORIGIN      
        1 ggcaccgtct ccttcagggt gtcgatgcag tacttggcgg cggcgaaggc gtcggcccgg
       61 tgcggggtcg aggcgacgac gatcacgctg gcctcggtga gctcgagccg gccggtgcgg
      121 tgcaggaggg cgatccggac gacgtcgggc cagcgccgcc ggcactcggc cgccacctcc
      181 ttgagcttga cgacggcctg ttcctcgtag gcctcgtacg tcagggcctt gaccccgggc
      241 cggccctcgg agctgtcccg gacggtgccg gcgaagcaca ccacgccgcc gcactgcggc
      301 agcgccgccc actccatggc ctcggcggcc ggcagcacgt cctccgacag ttcgatccag
      361 tcgtcggcgg ggggctccgg aggtcgcatg gggcaccagt gtagaagtgc tgaacagcag
      421 gggaacaagc gccggagggg cgggtcgggg gcgaaggcaa ccggcggaaa cccgtcggta
      481 cactcctgac atggagccgg atgacgagga tgaactcgaa gcgttccgct cccccgacga
      541 ccgggagcgg atctggctcc acccgtcgga actgggctcg ctcctgccgc cggtgcgcga
      601 ccccgcccgt cccgggcgtc gtcggcgccg gccgtggcgg cggctccggg cgctgaccgt
      661 cccggtgctg tcgggaatga tcggcgccgc cctctgcgtc ggcgtcctcg ccctggccgg
      721 cggcctcgac cactccgccg accgggtcgt cgagcgggtc accaaccagc cggcctacga
      781 cctcggcgcc cccgacggga tcgccgcgct ggccgccgcc gtcgccccgt cgatcgtggc
      841 cctccgggcc acgaccccca acggcgaccg gttcgggtcc ggggtcatct tccggtccga
      901 cgggcatgtc ctcaccaact tccacctcgt cgacggcgcc acctcgatcg aggtcacctg
      961 cgccgacggc cggtcgtggg cggcgcagcc ggccggcacc gacttcgaga gcgacctggc
     1021 cgtcctctcg gtgaccgaca gccacgtgat ggagcccgcc gtcctcggca ccgcccgctc
     1081 gctcaaggtc gggcagaccg ccatcgtcgt cggcgccccg gccgggccgc agggctcgcc
     1141 gtcggtgacc gccggtgtca tcgccggcct cggcgaggtc gtcgaggtcg ccggccaccc
     1201 gctctacgac atgatctcca ccgacgccat gatcgggccc cgggcctcgg gcgggccgct
     1261 ggtcgaccgc aacggcgccg tcgtcggcat caccacccgg acgggggccg gcgacgacag
     1321 cctcggcctc gtcgtcccca tcgacctcgc ccggaaggtg gccgagaagc tcatcaccgc
     1381 cggccgggtc gcctggccct ggctcggcgt gtcgggcacc gacctcgacc cctggacggc
     1441 caaggagtac ggcgtcgcca ccggaaccct catccggcgc gtgaccccca agagcccggc
     1501 cgacgtcagc gggctcaagg tgcaggacgt cgtgaccgcg gtcgagaacc tgccgatctc
     1561 caccatgaac gagttgatga tgctcgtgcg ccgccacgag ccgggcgacc gggtcgacct
     1621 caccgtcgtc cgctcggggg tcacgcgcca cgtgaaggtt cggctggcgg agtccccgga
     1681 cgggcgctga accctcgagc gccgctcgag ggtgggccgg gttcggcctg agcgacggtt
     1741 cgccgaccgt ccggaacctt caacgaacgc tcgcagcgcc cgggcttccg gttcgagacc
     1801 gcaactgtta ggttccgaat ccggagcgga ggccgtagtt cttacggctg ctgggcgcag
     1861 acttcccctc gagcccttct cacgcgcggt tcgggcgctt gccgcaccct ctctctgccg
     1921 ttcccagccc cacccgagga caccttgggc gacacccccg tagcagcctc cgatctcacc
     1981 ggcgccacgc tgctcagcga cagcgagctg gtgctgcggg cgcgccaggg ggaccgccgc
     2041 tccttcggga ccctgtacct ccgccaccac gacgccgcct ggcgcgtggc ctgtgccgcc
     2101 gccggctccc cgaccgacgc cgaggacgcc gtggccgagg gcttcgccaa ggtcttcgcc
     2161 gctctgcccc ggatggtgga gtccgacctg gccttccgtc cctacctcct ggcctgcgtg
     2221 cgcaacgccg ccatcgacgg gaagcggcgg gagcgccggg tcgacctcac cgacgacgtc
     2281 cccgacgacg tcgccgaccc ggacgggccg gacgagatcg tgctcgccga cctggagcgc
     2341 aacctcgtcg gcgaggcgct ccggtcgttg ccggaacgct ggcggacgat cctg
//
LOCUS       DATGJT010000233         3075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_30711, whole genome shotgun sequence.
ACCESSION   DATGJT010000233 DATGJT010000000
VERSION     DATGJT010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3075
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30711"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1088
                     /locus_tag="VKX24_04015"
     CDS             <1..1088
                     /locus_tag="VKX24_04015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLJ07676.1"
                     /translation="QVLARLHFALEDHGILFLGKAESLLSHGHLFAPVDLKRRIFVKV
                     TKDTLRERLSVINDGGAPEPLESPVRYRRVRELANDALPTPVVVVHHTGIVAMANAAA
                     RRLFGITPGDIGRPFQDLELSYRPAELRSALEEVLKEQRPLRLEQVEWPDGPGAVNCL
                     DIHVVPVNDAAGLNLGMALSFVDVSLSRRLQEDLEHANRDLETAYEELQSTNEELETM
                     NAELHSTNEELQAINDELRMRTGELDEVNDFLESMLVSQRGGLVIVDQDLRISVWNDA
                     SAELWGLRRDETPGQHFLNLDIGLPVEELRQPIRAVLTGESPGDTVVLDATNRRGREF
                     RCRVSIAPLLDRERQIRGVMLSMEDAG"
     gene            complement(1104..2114)
                     /locus_tag="VKX24_04020"
     CDS             complement(1104..2114)
                     /locus_tag="VKX24_04020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07677.1"
                     /translation="MQEKARSAPPLQTLFERVSANRLVVLEMASRLSALRLASRDARI
                     RAETLLLDNRQGLDMLHDGLAECRRWQRDRRSPFVPTVPGYNPRHRTDPLDLVRLQLH
                     EAYAATGDPALRDELMASYDGFARSLALRYRHREALDDLIQVARIGLLHAIDRFDPNL
                     GRPFPLFARITIAGELKRHIRDKTWGMRVPRSLQEDYLNVMRAVDELTAEQSDSPSME
                     SLAARCGLSVERVVEAMELRVSQRAMSIDVPAVPGSDDPVIELGQDDAGFRQLENRQL
                     LGHLLGRLPERDRRIVELRFIDELTQSEIAAEVGVSQMCVSRVLARTLGRLRLWARSA
                     VN"
     gene            complement(2402..>3075)
                     /locus_tag="VKX24_04025"
     CDS             complement(2402..>3075)
                     /locus_tag="VKX24_04025"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ07678.1"
                     /translation="DASHELRTPLTSIQGFAELFRMGEAGDPRPAGAPGVDLAVILRR
                     IEEESARMKTLVEDLLLLARLDQTRPVERAPVDLAVLAADACSDAVAAAPDRPVALDA
                     PEPVVVLGDRDHLRQAIANLVTNAVRHTPAGTPIEVSARLADGAATVAVRDHGAGLGD
                     EALAHVFDRFWQADAARAGAGAGLGLAIVAGIAAEHGGEARAANAADGGALFTLRLPL
                     GARPA"
BASE COUNT          423 a         1073 c         1167 g          412 t
ORIGIN      
        1 cccaggtgct ggcccggctc cacttcgcgc tcgaagacca cgggatcctc ttcctcggca
       61 aggccgagag cctgctgtcg cacggccacc tcttcgcccc ggtcgacctc aagcggcgga
      121 tcttcgtgaa ggtcaccaag gacacgctgc gggagcgcct gtcggtcatc aacgacggcg
      181 gggctccgga gccgctcgag tcgccggtca gataccgccg ggtccgggag ctggccaacg
      241 acgccctgcc gacccccgtc gtggtcgtcc accacaccgg catcgtggcc atggccaacg
      301 ccgccgcccg gcgcctgttc gggatcacgc ccggcgacat cggccgcccc ttccaggacc
      361 tcgagctgtc ctaccgcccg gccgagctgc gctccgctct tgaggaggtc ctgaaggagc
      421 agcggccgct gcggctcgag caggtggagt ggccggacgg gccgggggcg gtcaactgcc
      481 tcgacatcca cgtcgtcccg gtcaacgacg ccgccggcct caatctcggg atggcgctgt
      541 cgttcgtcga cgtgtcgctg tcccgccgcc tccaggagga cctggagcac gccaaccgcg
      601 acctcgagac cgcctacgag gagctccagt cgaccaacga ggagctcgag accatgaacg
      661 ccgaactcca ctccaccaac gaggaactgc aggcgatcaa cgacgagctc cggatgcgga
      721 cgggcgaact cgacgaggtg aacgacttcc tggagtcgat gctggtgagc cagcgcgggg
      781 gtctcgtgat cgtcgaccag gacctgcgga tctcggtctg gaacgacgcc tcggccgagt
      841 tgtggggcct ccggcgggac gagacgcccg gccagcactt cctgaacctc gacatcgggc
      901 tcccggtgga ggagctccgc cagcccatcc gggcggtgct caccggggaa tcgccgggcg
      961 acacggtggt gctcgacgcc accaaccgtc gggggcggga gttccggtgc cgggtgtcga
     1021 tcgcgccgct gctcgaccgg gagcggcaga tccgcggcgt gatgctgtcg atggaggacg
     1081 ccggctgagc cggcgcccgc cggtcagttg acggcggacc gggcccagag ccgcagccgg
     1141 ccgagcgtgc gggccagcac ccgggagacg cacatctggc tgacgccgac ctcggcggcg
     1201 atctccgact gggtcagctc gtcgatgaag cgcagctcga cgatgcgccg gtcgcgctcg
     1261 ggcagtcggc cgaggagatg gccgaggagc tggcggttct cgagctggcg gaagccggcg
     1321 tcgtcctggc cgagctcgat caccgggtcg tcggagccgg ggacggcggg cacgtcgatc
     1381 gacatcgccc gctggctcac ccgcagctcc atggcctcca ccacccgttc caccgacagg
     1441 ccgcagcgcg ccgccaggga ctccatcgac ggcgagtcgg actgctcggc ggtcaactcg
     1501 tcgaccgccc gcatgacgtt gaggtagtcc tcctggaggg agcgcgggac gcgcatgccc
     1561 caggtcttgt cgcggatgtg gcgcttcaac tcgccggcga tggtgatgcg ggcgaagagc
     1621 gggaacgggc ggcccaggtt cggatcgaac cggtcgatgg cgtggagcag accgatccgg
     1681 gcgacctgga tcaggtcgtc gagtgcctcc cggtggcggt accggagcgc caacgagcgg
     1741 gcgaagccgt cgtaggaggc catcagctcg tcccgcaacg ccgggtcccc ggtggcggcg
     1801 taggcctcgt ggagctgaag gcgcacgagg tcaagggggt cggtacggtg gcggggattg
     1861 tagccgggca ccgtcggaac gaacggggag cgccggtcgc gctgccatcg gcggcactcg
     1921 gccagcccgt cgtgcagcat gtccaggccc tgccggttgt cgagcagcag ggtttcggcc
     1981 cggatgcggg cgtcccggct cgccaggcgg agggccgaca gccgggacgc catctccagc
     2041 acgacgagcc ggttcgccga gacacgttcg aagagcgtct ggagcggcgg ggcggagcgg
     2101 gctttctcct gcatggcgtg gttcctcggg gactgcggac tgcagcgctt cgtaccctga
     2161 cggtactggg tgcaatctcc aggtgggggg gcacgctcgg tggcgggatc gggggcgtca
     2221 caccgcgttg gcggggcgcg tcgcggggta gtcgccccgc catgtcacag cctcgcgctt
     2281 cccgcggccg gggtgtcgtc ggcccgctgc gtcacggacg gcgcagcgcc gtttctccat
     2341 cgaccgtttc gtggccgact gggatgccgc cctccgacgg aagacggcgg agcggcgggt
     2401 ctcaggccgg ccgggccccg agcggcagcc ggagcgtgaa cagcgcgccg ccgtcggcgg
     2461 cgttggcggc gcgggcctcg ccgccgtgct cggcggcgat gccggccacg atggccaggc
     2521 cgagcccggc gccggcgccg gcccgggcgg cgtcggcctg ccagaagcgg tcgaagacgt
     2581 gggccagcgc ctcgtcgccg aggccggcgc cgtggtcccg gacggcgacg gtggccgcgc
     2641 cgtcggccag acgggcgctg acctcgatcg gcgtcccggc cggcgtgtgc cggacggcgt
     2701 tggtcaccag gttggcgatc gcctgccgca ggtggtcgcg gtcgccgagc accaccaccg
     2761 gttcgggggc gtcgagggcc acgggccggt cgggggcggc ggccacggcg tcgctgcagg
     2821 cgtcggcggc gaggacggcg agatccaccg gcgcccgctc caccggccgc gtctggtcga
     2881 ggcgggccag gagcagcagg tcctcgacca gcgtcttcat gcgggccgac tcctcctcga
     2941 tgcggcggag gatgaccgcc aggtcgacgc ccggcgcccc ggccggccgc gggtcgccgg
     3001 cctcgcccat gcggaacagt tcggcgaaac cctggatcga cgtcagcggc gtccgcagct
     3061 cgtgggaggc gtcgg
//
LOCUS       DATGJT010000234         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_135457, whole genome shotgun sequence.
ACCESSION   DATGJT010000234 DATGJT010000000
VERSION     DATGJT010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135457"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /gene="ccsA"
                     /locus_tag="VKX24_04030"
     CDS             complement(<1..990)
                     /gene="ccsA"
                     /locus_tag="VKX24_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HLJ07679.1"
                     /translation="MKGAIGFGGVTLGFMAAALGVVTLGVGIHRRDGRLMATGRQFVF
                     MVLLGALIAAGAMEWALVTHDFSIAYVVKNHSRETPLLYTVAALWGALEGSILLWAVV
                     LAGYLTVTVRRLRARASEPLVAWATLVGLVVAAFFFALMLGPANPFRPTAGLIPRDGM
                     GPNPLLQNHVLMAIHPPMLYLGYVGMTIPFSFAIAALITGRVGEGWLLETRRATLVAW
                     AFLSVGIVLGAWWSYEVLGWGGYWAWDPVENASFIPWLTATAFLHSVVVQERRGMLRV
                     WNLSLIVATFCLTILGTFLTRSGVLNSVHAFSQSSIGAWLLSFLGLAAVTGIGL"
     gene            complement(1016..1456)
                     /locus_tag="VKX24_04035"
     CDS             complement(1016..1456)
                     /locus_tag="VKX24_04035"
                     /inference="COORDINATES: protein motif:HMM:NF015085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HLJ07680.1"
                     /translation="MTVTAPPTPPPTPVRKPRRLRYWVAGGLCLAAVGYLIIGGLGSN
                     IVYFKTVSEAVRDRPSQGDHRFRLMGAVVTGSVTRIPDGVSFQVTDGTQKASVVHHGD
                     PPELFKDGIPVVCEGHWQGTTFDSDRIMIKHGAEYHPPAVDASK"
     gene            complement(1453..1590)
                     /locus_tag="VKX24_04040"
     CDS             complement(1453..1590)
                     /locus_tag="VKX24_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07681.1"
                     /translation="MTDAGYVIGGWALTGVAIAGYVGRVWSRTRRARRLLGPDEQGRR
                     P"
     gene            complement(1587..2336)
                     /gene="ccsA"
                     /locus_tag="VKX24_04045"
     CDS             complement(1587..2336)
                     /gene="ccsA"
                     /locus_tag="VKX24_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011530378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HLJ07682.1"
                     /translation="MQKFWTRRGTTVLGGLTVVSLAVLVVLGLFVSDPDFQQGDAVRL
                     MYLHVPAAWISYLAYGVTSLASALYLWKRTRAQVWDTLAGASAEIGVLFTGLTLALGS
                     LWGRPVWNVWWAWDARIVSTAVLFFLYLGYLALRRVPAEPAVRARRCSIAALVAFVDV
                     PIVHFSVEWWRTLHQKGTIFNRELNPTIQGNLAWALLSGVVAFTFLYLYLLERRYRLA
                     LLEEAVEGRELDAAIAERRAEADVAVVGAPS"
BASE COUNT          416 a          871 c          851 g          271 t
ORIGIN      
        1 gaggccgatg ccggtcacgg cggccagtcc gaggaacgac agcagccagg cgccgatcga
       61 cgactgggag aaggcgtgca ccgagttgag gacgccggag cgggtgagga acgtgccgag
      121 gatcgtcagg cagaaggtgg ccacgatgag cgagaggttc cagacccgca gcatcccccg
      181 ccgttcctgc accacgaccg aatggagaaa ggccgtggcc gtgagccagg ggatgaacga
      241 ggcgttctcc accgggtccc aggcccagta gccgccccag cccagcacct cgtagctcca
      301 ccaggcgccg agcacgatcc cgaccgacag gaacgcccag gcgaccagcg tcgcccggcg
      361 ggtctccagc agccagccct cgccgacccg gccggtgatg agggcggcga tggcgaagct
      421 gaacgggatc gtcatgccga cgtagccgag gtagagcatc ggcggatgga tggccatcag
      481 cacgtggttc tggagcagcg ggttggggcc catcccgtcc cgggggatga gcccggcggt
      541 cggccggaag gggttggccg gcccgagcat gagggcgaag aagaaggccg ccaccaccag
      601 gccgacgagc gtcgcccagg ccaccagcgg ctcggacgcc cgggcccgca gccgccggac
      661 ggtcaccgtc aggtagccgg ccagcaccac cgcccacagc aggatcgagc cttccagtgc
      721 cccccacagc gccgccacgg tgtagagcag cggcgtctcc cgggagtggt tcttgaccac
      781 gtaggcaatg gagaagtcat gggtcacgag ggcccactcc atggcgccgg cggcgatcag
      841 cgccccgagc aggaccatga agacgaactg gcggccggtg gccatgagcc gcccgtcccg
      901 ccggtggatc ccgaccccca gggtcaccac gccgagggcg gcggccatga acccgagggt
      961 gacccccccg aacccgatcg cgcccttcac tgcgccgatc ccctctggcc ggctctcact
     1021 tcgaggcgtc caccgccggc gggtggtact cggcgccgtg cttgatcatg atccggtcgg
     1081 agtcgaacgt cgtcccctgc cagtggccct cgcagacgac ggggatgccg tccttgaaca
     1141 gctccggcgg gtcaccgtgg tggacgaccg acgccttctg cgtcccgtcg gtcacctgga
     1201 agctcacgcc gtcggggatc cgggtcaccg aacccgtcac caccgcaccc atgaggcgga
     1261 agcggtggtc gccctgcgac ggacggtccc ggacggcctc ggagacggtc ttgaagtaga
     1321 cgatgttgct gccgagcccg ccgatgatca gatagcccac cgccgccagg cacaggccgc
     1381 cggccaccca gtagcgcagc cgccgcggct tcctgaccgg cgtgggcggt ggggtcggcg
     1441 gcgccgtgac cgtcacgggc ggcgcccctg ctcgtcgggc ccgaggagcc ggcgggcccg
     1501 gcgggtgcgc gaccacaccc gtccgacgta gccggcgatg gccaccccgg tcagcgccca
     1561 gcccccgatg acgtagccgg cgtcggtcac gacggcgctc ccacgacggc gacgtcggcc
     1621 tcggcccggc gctcggcgat ggcggcgtcg agctcccggc cctcgaccgc ctcctccagc
     1681 agggccagcc ggtagcggcg ctccagcagg tagaggtaga ggaacgtgaa ggccaccacg
     1741 cccgacagca gcgcccaggc caggttcccc tggatggtgg ggttcagctc ccggttgaag
     1801 atcgtgccct tctggtgcag cgtccgccac cactcgaccg agaagtggac gatcggcacg
     1861 tcgacgaagg ccaccagggc ggcgatggag caccgccggg cccggacggc gggctcggcc
     1921 ggcacccgcc gcagcgccag gtagccgagg tagaggaaga acaggacggc ggtggagacg
     1981 atgcgggcgt cccacgccca ccagacgttc cacaccggcc ggccccacag cgacccgagg
     2041 gccagcgtga ggccggtgaa gaggacgccg atctccgccg aggcgccggc cagcgtgtcc
     2101 cacacctggg cccgggtccg cttccagagg tagagggccg acgccaggct cgtgacgccg
     2161 taggccaggt aggagatcca ggccgccggc acgtggaggt acatcagccg gacggcgtcg
     2221 ccctgctgga agtcggggtc ggagacgaac agcccgagca cgacgaggac ggccagactg
     2281 acgaccgtga ggccgcccag caccgtcgtc ccccgacgcg tccagaactt ctgcactacg
     2341 tctcctccag aagcggcccg aaggccagcc accccatcgt cgtgtagatc accccgaaca
     2401 ccgccagga
//
LOCUS       DATGJT010000235         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_861943, whole genome shotgun sequence.
ACCESSION   DATGJT010000235 DATGJT010000000
VERSION     DATGJT010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861943"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /locus_tag="VKX24_04050"
     CDS             complement(<1..677)
                     /locus_tag="VKX24_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07683.1"
                     /translation="MRTLFGRAAQRGRRVGLGLSVAVLAGLTSLVATVPYARSASAPA
                     STSGYWLVGTDGGIFSFGNAGFLGSTGALTLNQPIVGMAATPDGRGYWMVASDGGIFA
                     FGDAAFYGSMGGKPLNQPIVGMAATHTGRGYWLVASDGGIFAFGDAVFYGSMGATHLN
                     KPIVGIAPTPDGRGYWMSASDGGIFSFGDAGFYGSTGAIKLSKRIQAMSPTPDGRGYW
                     LVAGDGGV"
     gene            complement(815..973)
                     /locus_tag="VKX24_04055"
     CDS             complement(815..973)
                     /locus_tag="VKX24_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07684.1"
                     /translation="MTHPPVVLAHQGGWDEMLFVLVPLLVFLTLQKLNRRKMREEDED
                     AQKPPSQQ"
     gene            1042..>2001
                     /locus_tag="VKX24_04060"
     CDS             1042..>2001
                     /locus_tag="VKX24_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /protein_id="HLJ07685.1"
                     /translation="MPPEKLHWKHLYQEVVTSGLCTGCAGCVVACPHDVLGYKDTEDV
                     YKPFHLEEELGPGGCGHGDRGCTSCTRACPRFRTWEPEIDQFLFGRPRSAIEVEGVTK
                     DVILTRASDEKVHELGQDGGLVSAILIWALDHGYIDAALVSYLEGDGSTWKAIPGVAR
                     TKEQILEAAGSRYTYCANTMAYAEAVEGGAEKIALVGMSCQSSVPPVMSLRKAGKVAR
                     RFALNIGLLCSKTFDDAIFEELFEAKYGLKKADIKKMNIKGVFQIWMHNGDYHEVPLK
                     ECHQWTREGCKLCPDFAAEHADISTGGIGKYNDWTLTIVRTDAG"
BASE COUNT          350 a          664 c          715 g          272 t
ORIGIN      
        1 acgccgccgt cgccggccac gagccagtag ccccgcccgt cgggggtcgg cgacatggcc
       61 tggatgcgct tgctcagctt gatggcgccg gtcgagccgt agaacccggc gtcgccgaag
      121 gagaagatcc cgccgtcgga cgccgacatc cagtagcccc gcccgtcagg cgtgggggcg
      181 atgccgacga tcggcttgtt caggtgggtg gcgcccatcg agccgtagaa gacggcgtcg
      241 ccgaaggcga agatcccgcc gtcggaggcc accagccagt agccgcggcc ggtgtgggtg
      301 gcggccatgc cgacgatcgg ctggttgagc ggcttgccgc ccatcgagcc gtagaaggcg
      361 gcatcgccga aggcgaagat gccgccgtcg gaggccacca tccagtagcc ccgcccgtcg
      421 ggggtggcgg ccatgccgac gatcggctgg ttgagggtga gggccccggt cgatccgagg
      481 aatccggcgt tgccgaagga gaagatccca ccgtcggtgc ccaccagcca gtagcccgac
      541 gtcgacgccg gcgccgaggc ggaacgggcg tacggaacgg tggccaccag gctggtcagc
      601 ccggcgagga ccgcgacact gaggccgagc ccgactcgcc gcccgcgctg ggcggcccga
      661 ccaaacaacg tgcgcatgct gacgcctccg gcaccggtgg ggtgatgacc ggagcgcggg
      721 gggtgcgact ccggctccca atggaacgca cgagttcacc gggcgtgacg ccggccggcg
      781 gggcagagca gcgctgttac ggaagtgaca atagttattg ctgcgaaggc ggcttttggg
      841 cgtcctcgtc ctcttcccgc atcttgcggc ggttgagctt ctggagcgtc aggaacacga
      901 ggagcgggac gaggacgaag agcatctcgt cccagccgcc ctgatgggcg agtacgaccg
      961 gcgggtgcgt catggcgctc agagggtatc cgcagaccgg gccgtgccac actgcagcca
     1021 ggacgacgga ggatgacggg catgccgccg gagaagctgc actggaagca cctgtaccag
     1081 gaggtcgtga ccagcgggct gtgcacgggc tgcgccggct gcgtcgtggc ctgccctcat
     1141 gacgtcctcg gctacaagga caccgaggac gtctacaagc cgttccacct cgaggaggag
     1201 ctcggcccgg gcgggtgcgg gcacggcgac cggggctgca cctcgtgcac gagggcctgc
     1261 ccccggttcc ggacctggga gcccgagatc gaccagttcc tcttcggccg gccccgttcg
     1321 gccatcgagg tggagggcgt caccaaggac gtcatcctca cccgggcgtc cgacgagaag
     1381 gtccacgagc tcggccagga cggcggcctc gtgtcggcca ttctcatctg ggccctcgac
     1441 cacggctaca tcgacgccgc cctcgtctcc tacctggagg gcgacggatc gacgtggaag
     1501 gcgatccccg gggtggcccg cacgaaggag cagatcctgg aggcggccgg cagccgctac
     1561 acctactgcg ccaacaccat ggcctacgcc gaggccgtcg agggcggcgc ggagaagatc
     1621 gccctcgtcg gcatgagctg ccagtcgtcg gtgccgccgg tcatgagcct gcgcaaggcc
     1681 ggcaaggtcg cccggcgctt cgccctcaac atcgggctgc tgtgctccaa gacgttcgac
     1741 gacgccatct tcgaggagct cttcgaggcc aagtacggcc tgaagaaggc cgacatcaag
     1801 aagatgaaca tcaaaggcgt gttccagatc tggatgcaca acggcgacta ccacgaagtg
     1861 ccgctgaagg aatgccacca gtggacgcgc gaaggctgca agctgtgccc cgacttcgcc
     1921 gccgagcacg ccgacatctc gacgggtggc atcggcaagt acaacgactg gacgctcacg
     1981 atcgtgcgca cggacgcggg g
//
LOCUS       DATGJT010000236         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_445637, whole genome shotgun sequence.
ACCESSION   DATGJT010000236 DATGJT010000000
VERSION     DATGJT010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445637"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /gene="prfA"
                     /locus_tag="VKX24_04065"
     CDS             <1..913
                     /gene="prfA"
                     /locus_tag="VKX24_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HLJ07686.1"
                     /translation="GDIDAARELAEESQGDERELAREELARSEEEVGAFEAQLRGLLL
                     PKDPNDGRNVIVEIRGAEGGEEANLFARDLFTMYTRYADRHRWGLEVLSESATGRDGL
                     NEVVFVVKGKDAWRHFENEAGPHRVQRVPVTESKGRVHTSSATVTVLPEADEVDVVID
                     PADLKVDVYRSTGPGGQSVNTTDSAVRITHLPTGIVVAMQDEKSQLQNRAKAMTVLRA
                     RLLKAEQDRRASEVAATRRSQVGGGGRSEKIRTYNYKENRVTDHRIGLTLYKLDQVLV
                     GDLDEFADALMADKRARQLGEEDAEHG"
     gene            910..1773
                     /locus_tag="VKX24_04070"
     CDS             910..1773
                     /locus_tag="VKX24_04070"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HemK/PrmC family methyltransferase"
                     /protein_id="HLJ07687.1"
                     /translation="MSPSGPHGAARELAGALAETLGTREARWVLEDLGAPPGGPLTAE
                     QERAALALAARRGAGEPLQYVLGHWPFRQLDLLVDRRALIPRPETEWVTDVALAELDR
                     LVALGAPPRVVDLGTGTGAIALSIATERVAYDVEVTATDVDPGALELARANHERVGSP
                     SSVRWRAGSWWEALDSSARGRVSLVVANPPYVAPLEWEVLDPVVRDHEPRGALVAGAG
                     SDGTPGFAAVEAVLAGAPEWLGRPGTVVVEIAPSQEGAAVWAAGRSGSAESRVLADLA
                     GRPRALVARWE"
     gene            1770..>2109
                     /locus_tag="VKX24_04075"
     CDS             1770..>2109
                     /locus_tag="VKX24_04075"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HLJ07688.1"
                     /translation="MSAPPTVPVDDLAPIVERLEQGLVVALPTDTVYGLAVRLEPDAV
                     DRVFSAKGRPTDLALPVLIGRLDQVGLLTPSFGPPATVLAARFWPGALTLVVRARRRV
                     GALVGGTGATV"
BASE COUNT          277 a          784 c          795 g          253 t
ORIGIN      
        1 aggcgacatc gacgccgccc gcgagctggc cgaggagtcc cagggcgacg aacgcgagct
       61 cgcccgggag gaactggcgc gctcggagga ggaggtgggc gcgttcgagg cgcagctgcg
      121 gggcctcctc ctcccgaagg acccgaacga cggccgcaac gtcatcgtcg agatccgggg
      181 ggcggagggc ggcgaggagg ccaacctctt cgcccgcgac ctgttcacca tgtacacccg
      241 ctacgccgac cgtcaccgct ggggcctcga ggtgctctcg gagagcgcga ccgggcggga
      301 cgggctgaac gaggtcgtct tcgtggtgaa ggggaaggac gcctggcggc acttcgagaa
      361 cgaggcgggg ccgcaccggg tccagcgcgt cccggtcacc gagtccaagg gccgggtcca
      421 cacctcctcg gccacggtca cggtcctgcc ggaggccgac gaggtggacg tggtcatcga
      481 cccggccgac ctgaaagtcg acgtctaccg gtcgaccggt cccggcggcc agtcggtgaa
      541 cacgacggac tcggccgtcc ggatcaccca cctcccgacc gggatcgtgg tggccatgca
      601 ggacgagaag agccagttgc agaaccgggc gaaggccatg accgtgctgc gggcgcgcct
      661 gttgaaggcc gaacaggacc ggcgggcctc cgaagtcgcc gccacccggc gcagccaggt
      721 cggcgggggg ggacgctccg agaagatccg gacgtacaac tacaaggaga accgggtcac
      781 cgaccaccgc atcggtctca ccctctacaa gctcgaccag gtgctcgtcg gcgacctcga
      841 cgagttcgcc gacgccctga tggccgacaa gcgggcccgc cagctcggcg aggaagacgc
      901 ggagcacggg tgagcccctc cggcccccac ggggccgccc gggagctcgc cggcgcgctc
      961 gccgagaccc tcgggacccg ggaggcacgc tgggtcctcg aagacctggg cgcgccgccc
     1021 ggtggaccgc tgaccgccga gcaggagcgg gcggccctcg cgctggcggc tcggcgcggg
     1081 gcgggggagc cgctgcagta cgtcctcggc cactggccgt tccgccagct cgacctcctg
     1141 gtcgaccggc gggcgctcat cccgagaccc gagaccgagt gggtgaccga cgtggcgctg
     1201 gccgaactgg accggctcgt cgccctgggc gcgccgccgc gggtggtcga cctcggcacc
     1261 ggcaccggcg cgatcgcgct ctcgatcgcg accgagcggg tcgcgtacga cgtcgaggtc
     1321 accgcgaccg acgtcgatcc cggcgccctc gagctcgccc gggccaacca cgagcgggtg
     1381 gggtccccgt cctcggtccg ctggcgggcc ggctcctggt gggaggcgct cgactcctcg
     1441 gcgcggggaa gggtgagcct ggtcgtggcc aacccgccgt acgtggcccc gctcgagtgg
     1501 gaggtgctcg accccgtggt gcgcgaccac gagccgcgcg gcgccctcgt cgccggcgcg
     1561 ggctccgacg gcaccccggg gttcgcggcg gtcgaggccg tcctcgccgg cgcgccggag
     1621 tggctggggc gcccgggcac ggtcgtcgtc gagatcgcgc ccagccagga gggcgcagcg
     1681 gtctgggccg ccgggcggtc cggcagcgcc gagtcgcggg tcctggccga cctggccgga
     1741 cggccgagag cgctcgtcgc ccgctgggag tgagcgcgcc tccgaccgtc ccggtcgacg
     1801 acctggcccc gatcgtcgag cgcctggagc aggggctcgt cgtcgccctc ccgaccgaca
     1861 ccgtctacgg cctcgccgta aggctggaac ccgacgccgt cgaccgcgtc ttttccgcca
     1921 aggggcgtcc gaccgacctc gccctgccgg tcctcatcgg ccggctcgac caggtcgggc
     1981 tgctcacccc ctcgttcggc cctccggcga ccgtcctcgc cgcgcgcttc tggccggggg
     2041 cgctcaccct ggtcgtgcgc gcccgccgtc gtgtcggggc gctcgtcggc gggaccggcg
     2101 ccacggtcg
//
LOCUS       DATGJT010000237         2993 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_31598, whole genome shotgun sequence.
ACCESSION   DATGJT010000237 DATGJT010000000
VERSION     DATGJT010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31598"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..1058
                     /locus_tag="VKX24_04080"
     CDS             15..1058
                     /locus_tag="VKX24_04080"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ07689.1"
                     /translation="MGVLRTRRVRVGLTAAALAVLALGAGCSSSNDSGKAATKQSGKV
                     TPEVVTIRAGINDPDHSQIAVLQFMPARATVSVGQAVRWNWADTKEPHTVTFFPPGQS
                     APAPGSDPSLFAPAPAKGPYDGTTLVNSGLVPQGPQAVPPFEMTFAKPGTFNYTCVIH
                     PQMVGSIVVVAGDGGETAAAVTTRGDQEKGQWLAEGNEAFQKFEATAPAPTKNRDGTT
                     TWTVQMGTSTPHTDILAYAPVPAAVKHGDKVTFLNNSGAPHTASFFNKQLAIQNPEDP
                     AAQKPAPGPSPQKLNATDLFNTGTLPPDAPPGAGPPAAARSFTFSVPAAGSYQYVCIY
                     HAPSGMGGVIQAS"
     gene            1294..2757
                     /locus_tag="VKX24_04085"
     CDS             1294..2757
                     /locus_tag="VKX24_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07690.1"
                     /translation="MTRILAATVTALTMGAAVVGGLAGPASAAGALPDHVGFQQWSDV
                     GHQWTTGDLNFHGTNDSNYVEGDTVPFLLDVTSAGLGTYGFSVCRDYMNGTAFGYLSL
                     MPYDTSRVPALAAVPLVTDPAMGSLQPFTGAAAGGSVVIDSVHEVGGQGACKAGQRET
                     QVQITIGAGPGGVAPVDAYVLWGGRLASPIDAGVGAGDGASAYPGATLSMQLLSAAKN
                     LSIKVGPASTGTLTVKDVIDPGSDPGKFNLQIDSSTAGTGGNVGDGGSTGAVLVYSGP
                     HDVGAAGAGTTNVADYTSSVSCTDGTVSALGPVVTVADGQDVVCTVTLTPVVPNPSSG
                     STPTTSTTTPGTVDPTLIVINDPLPTSTTTTAPKHHVQPGDDDGSGGDNSDVDPTDTT
                     PTTITTTVVDPGATVAGGGQTAGPAPEVLGTVAERPAPAPAANPESATPAPAPGGGLL
                     PRTGAGIAGEAGLAVALLAAGLGVLRLARRRRPSPQG"
BASE COUNT          454 a         1137 c         1005 g          397 t
ORIGIN      
        1 caggcggagg tctcatgggt gttctgcgaa cccggcgcgt tcgggtcggg ttgacggcgg
       61 cggcgttggc ggtgctcgcc ctcggcgcgg gctgcagttc gtcgaacgac agcggtaagg
      121 cagccacgaa gcagtcgggc aaggtcacgc ccgaggttgt gaccatccgg gccgggatca
      181 acgaccccga ccactcgcag atcgccgtcc tgcagttcat gccggcccgg gcgacggtgt
      241 cggtggggca ggcggtgcgg tggaactggg ccgacaccaa ggaaccgcac acggtcacct
      301 tcttcccgcc cggccagagc gcaccggcgc cgggcagcga cccgagcctc ttcgcccccg
      361 cgcccgcgaa ggggccctac gacgggacga cgctggtcaa cagcggcctc gtcccccagg
      421 gtccgcaggc ggtgccgccg ttcgagatga ccttcgccaa gcccggcacg ttcaactaca
      481 cctgcgtcat ccacccccag atggtggggt cgatcgtcgt cgtggccggc gacggcggcg
      541 agacggcggc cgccgtcacc acccggggcg accaggagaa gggccagtgg ctggccgagg
      601 gcaacgaggc cttccagaag ttcgaggcca ccgccccggc gccgacgaag aaccgggacg
      661 gcacgacgac ctggacggtg cagatgggga cgtcgacgcc ccacaccgac atcctggcct
      721 acgcccccgt cccggccgcc gtcaagcacg gcgacaaggt gacgttcctc aacaactcgg
      781 gcgcgccgca cacggccagc ttcttcaata agcagctggc gatccagaac cccgaggacc
      841 cggcggcgca gaagccggcc cccggcccgt ccccccagaa gctcaacgcc accgacctct
      901 tcaacaccgg cacgctgccg cccgacgccc cgcccggcgc cggccccccg gcggccgccc
      961 gcagcttcac gttctcggta ccggcggccg gcagctacca gtacgtctgc atctaccacg
     1021 ctccgagcgg catgggcggg gtgatccagg cgtcgtaacg gcgtcaccgc ctgaccaggc
     1081 agacagggcc ccggccgtac ggtcggggcc ctttcgcgtg cctcgttccg cggcctggtc
     1141 ggtcggacta gttcatcgct gcagctttgc cgcaatggcg ccgcgaatag tcaagagaac
     1201 cgtaacccga tgtcatcagc gtccgatgta ctggtggaac gcgagacggc aatgaccaag
     1261 ggagttcgtt cggtgtcgaa gcagcgcaac ggtatgactc ggatcctcgc cgccacggtg
     1321 accgccctca ccatgggcgc ggccgtggta ggcggactgg ccgggccggc ctcggcggcc
     1381 ggcgccctgc ccgaccatgt cggcttccag cagtggagcg acgtcggcca ccagtggacg
     1441 accggcgatc tcaacttcca tgggaccaac gactcgaact acgtcgaagg cgacaccgtt
     1501 ccgtttttgc tcgatgtgac gagcgccggc cttggcacat acggcttctc ggtctgccgt
     1561 gactacatga acggcacggc cttcgggtac ctcagcctga tgccttacga cacgagccgg
     1621 gtgccggcgc tcgccgcggt gccgctcgtc accgaccccg ccatgggctc gctgcagccg
     1681 ttcaccggcg ccgccgcggg cggcagcgtc gtcatcgact cggtgcacga ggtcggcggc
     1741 cagggcgcct gcaaggcggg ccagcgggag acgcaggtcc agatcaccat cggagccggg
     1801 ccgggcggcg tcgctccggt cgacgcctac gtcctgtggg gcggccgcct cgcctcgccg
     1861 atcgacgccg gtgtcggcgc cggcgacggt gccagcgcct accccggcgc cacgctgtcg
     1921 atgcaactgc tgtcggcggc gaagaacctg tcgatcaagg tcggtcccgc ctccaccggc
     1981 acgctgaccg tgaaggacgt catcgacccg gggagcgatc ccggcaagtt caaccttcag
     2041 atcgacagct cgaccgccgg gactggcggc aacgtcggcg acggcgggag caccggcgcc
     2101 gtcctcgtct actccgggcc gcacgacgtc ggggcggccg gcgccgggac cacgaacgtt
     2161 gccgactaca cgtcctcggt gagctgcacc gacggcacgg tgtccgcgct cggtcccgtc
     2221 gtcacggtcg ccgacgggca ggacgtcgtg tgcacggtca cgctgacgcc ggtcgttccg
     2281 aacccgtcct ccgggtcgac tccgaccacc agcacgacga cgcccggaac agtggacccg
     2341 accctgatcg tcatcaacga cccgctgccc acgtcgacca cgacgaccgc tccgaagcac
     2401 cacgtgcagc cgggcgatga cgatggctcc ggcggcgaca acagcgacgt cgacccgacc
     2461 gacacgacgc cgaccacgat cacgaccacg gtcgtcgacc ccggcgccac ggtggccggt
     2521 ggcggccaga ccgccggccc cgctcccgag gtcctcggca ccgtggccga gcggcccgcc
     2581 ccggctcccg ccgccaaccc ggagtcggcg accccggcgc ccgctccggg cggcgggctc
     2641 ctcccccgca ccggtgccgg catcgccggc gaggccggcc tggccgtggc gctcctcgcc
     2701 gccggtctcg gcgtcctccg cctcgcccgc cggcgccgcc cgtcccccca ggggtaaggc
     2761 tcggcagtcg ttgccataga gagcccagcc cgcgaaacgg cgccggggtc accgtctgca
     2821 cggaacggtg atcccggcgc ctttcgcgcc acgtcggccg cgggcgggtc ccaccaacgc
     2881 ttttggaggg cgtggcgcac ctcagcggtg gtccacgccc tccaaaaggt gattccggct
     2941 ctttagcgga cgagctccat gcgcagcccg tcctcgttcc actcggggtt ctc
//
LOCUS       DATGJT010000238         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_344354, whole genome shotgun sequence.
ACCESSION   DATGJT010000238 DATGJT010000000
VERSION     DATGJT010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344354"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VKX24_04090"
     CDS             <1..490
                     /locus_tag="VKX24_04090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ07691.1"
                     /translation="IIGNPELLFLDEPTTGFDPSARRSAWDLVRTLTRGGATVILTTH
                     YMDEAEALADRVAVLSAGRIVAEGAPESLGGRDRGEARIRFRLPPGTRPESLPVTPTS
                     VEDGHVEVHTSEEVAVLAALTTWALREGVALSGLTVERLTLEDVYLRLTQAGPPEPAV
                     KG"
     gene            492..1361
                     /locus_tag="VKX24_04095"
     CDS             492..1361
                     /locus_tag="VKX24_04095"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07692.1"
                     /translation="MTRSSGDGISDRSFRGLGDLRLVARQVYYEQLNFWLNPVAAVFT
                     LGFSVVFLILLGASAGSSHNRTIGGLAVIQYYVPGFIAYGVMATCFNSLSVSLVVRRE
                     TGLLKRARLAPLPTWVLISAIFLSTLVICLIQVVVLLLLGKFGYHVQFPTSWGAFALA
                     LAIGAASFTALGVAVSTLIPNQEAGAPVVSVVFFVLLFLSGLWYPISPHSGLAQFSSY
                     FPVRHMILAVFAPFDVGRTGSPWAWHDDLVMGIWGVAGVFASFRRWSWSPRRADRRGR
                     SRGFLTAGRAVGP"
     gene            complement(1441..>2214)
                     /locus_tag="VKX24_04100"
     CDS             complement(1441..>2214)
                     /locus_tag="VKX24_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /protein_id="HLJ07693.1"
                     /translation="GQDGGFVSALLIWALEHDQIDAALVSDLEGDGTSWRAVPAVART
                     REQILATAGSRYTYSANPMAYAEAIEAGAERLALVGMGCQTSATAVMSARKAGKVARR
                     FSLSIGLLCSKTFDDAIFPELFEARYGLPREEIKKMNIKGVFQVWMRDGSYHEVPLKE
                     AHAWTREGCQACPDFAAEHADISTGGIGAFNDWTLTLVRTERGKEIFDAMVADGAVEV
                     RSIDEDPGAVKLLGRLSVTSRKRWPATAVPMPGRIPVRS"
BASE COUNT          275 a          807 c          759 g          373 t
ORIGIN      
        1 gatcatcggc aaccccgaac tcctcttcct cgacgagccg acgaccgggt tcgacccgtc
       61 ggcgaggcgc agcgcctggg acctggtgcg gacgctcacg agaggcgggg ccaccgtcat
      121 cctgacgacg cactacatgg acgaggccga ggcgctcgcc gaccgggtcg ccgttctcag
      181 tgccggccgg atcgtggccg agggcgctcc cgaatccctc ggggggcgag accgcggcga
      241 ggcccggatc cgattccggc ttccccccgg gacccgtccg gagtcgctgc ccgtgacccc
      301 gacctcggtc gaggacggcc acgtggaggt gcacacgagc gaggaggtcg ctgtcctggc
      361 ggcgctcacc acgtgggcgc tgcgcgaggg ggtcgccctc agcgggctca cggtggagcg
      421 cctcacgctc gaggacgtct acctgcgcct gacccaggcc ggcccccccg agccggcagt
      481 caagggctga gatgacccga tcgagcggcg acggcatctc cgaccggagc ttccgcggtc
      541 tcggggacct gcgcctcgtc gcccggcagg tctactacga gcaactcaac ttctggctca
      601 acccggtcgc cgccgtcttc accctcggct tctccgtcgt cttcctgatc cttctcggtg
      661 cgagcgccgg cagcagccac aaccgcacga tcgggggcct ggccgtcatc cagtactacg
      721 ttccggggtt catcgcctac ggggtcatgg cgacgtgctt caacagcctc agcgtctctc
      781 tcgtcgtgcg ccgtgagacc ggcctgctga agcgggcccg gctggcccct ctgccaacct
      841 gggtgctgat ctcggcgatc ttcctcagca ccctcgtgat ctgcctcatc caggtcgtcg
      901 tcctgctgct cctcggcaag tttggctacc acgtccagtt cccgaccagc tggggcgctt
      961 tcgccctcgc gctcgccatc ggcgctgcgt ccttcaccgc gctcggggtc gcggtcagca
     1021 ctctcatccc caaccaggaa gccggagcac cggtcgtctc ggtcgtcttc ttcgtcctgc
     1081 tcttcctctc gggtctgtgg tacccgatca gcccgcactc ggggctcgcg cagttctcct
     1141 cctacttccc ggtgcgccac atgatcctgg cggtcttcgc acccttcgac gtcggtcgca
     1201 ccggctcacc ctgggcgtgg cacgacgacc tggtgatggg gatctggggt gtcgccgggg
     1261 tcttcgcgtc gtttcggcgg tggagctggt cgccccggcg ggcggaccgg cggggccgct
     1321 cccgggggtt cctcaccgcc gggagggcgg tcgggccctg aacgacgcgt ctgggcgctc
     1381 cggcccggtt ggctgcccgg gcccggctcg cgtggccctc ggtcgcccgt ggcgggcgtg
     1441 ctaggagcga accgggatcc ggcccggcat cggcacggcc gtcgccggcc agcgcttgcg
     1501 gctggtcacg ctcagccggc cgagcagctt gaccgcgccc gggtcctcgt cgatcgagcg
     1561 cacctcgacc gcgccgtcgg cgaccatggc gtcgaagatc tccttgccgc gctcggtgcg
     1621 gaccagggtg agggtccagt cgttgaaggc gccgatcccg ccggtcgaga tgtcggcgtg
     1681 ctcggcggcg aagtccgggc aggcctgaca gccctccctc gtccaggcgt gggcttcctt
     1741 gagcggcacc tcgtggtagg agccgtcgcg catccagacc tggaagacgc ccttgatgtt
     1801 catcttcttg atctcctcgc ggggcagccc gtagcgggcc tcgaagagct cggggaagat
     1861 ggcgtcgtcg aaggtcttgg agcagagcag cccgatcgac aggctgaagc gccgcgccac
     1921 cttgcccgcc ttgcgggccg acatcacagc ggtggccgag gtctggcagc ccatgccgac
     1981 gagggcgaga cgttccgccc cggcctcgat ggcctcggcg taggccatgg ggttggcact
     2041 gtaggtgtac cgggacccgg ccgtcgccag gatctgctcc ctcgtccggg cgaccgccgg
     2101 cacggcgcgc cagctggtgc cgtcgccctc caggtccgac acgagggcgg cgtcgatctg
     2161 atcgtgctcg agggcccaga tgaggagcgc ggagacgaat ccgccgtcct ggcc
//
LOCUS       DATGJT010000239         2508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_551926, whole genome shotgun sequence.
ACCESSION   DATGJT010000239 DATGJT010000000
VERSION     DATGJT010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551926"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..980
                     /locus_tag="VKX24_04105"
     CDS             84..980
                     /locus_tag="VKX24_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HLJ07694.1"
                     /translation="MDVVVSGSSGLIGTALGAALRRAGHRMVPMVRSSPAGDAIGWDP
                     DQGRIDAGGLEGVGAVVHLAGEGIGSKRWNDAQKARIRDSRVRGTALLAETLATLNRP
                     PKALLSGSAVGYYGDRGDEVLTESSRAGDGFLAEVCVAWEAAAAPAREAGIRVSHLRT
                     GIVLSADGGALPRMLTPFRLGVGGRLGSGSQWMSWISLDDEAGAIVHLLGDDAPAGAV
                     NLTAPNPVTNGDFTAALGRALRRPAAIPVPKIALKAVLGGEMAEELLLSSQRALPTRL
                     LDSGYTFARPDLAEALRAAVSR"
     gene            complement(970..1860)
                     /locus_tag="VKX24_04110"
     CDS             complement(970..1860)
                     /locus_tag="VKX24_04110"
                     /inference="COORDINATES: protein motif:HMM:NF013335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HLJ07695.1"
                     /translation="MGTHRKRLWIDTDINPPVRKAGVVDEGSNVDDAVALLAAVAHPA
                     VSLVGVSTVGPDPERRAAVAVGLLAGAGVDLGSVPVVAGAGGPEGGGGTGGSPGGAGA
                     GEDLSAVVEAVAASGAEALLAIGPLTNVAAITAAGVRPPEVTIMGGALRPVEHRGELR
                     AVEHNFGSDPGAAAAVLAVPGAVLVPLDATVATRLDARMAARLMATAPVLEPMVSTWL
                     EEWGEVVLHDPAALLVAAGDGSELGRFERRRLLVEPDGRLVDGGRGAAGTVHDVAASL
                     FGSAVVASVLALLADLGLSG"
     gene            complement(2176..>2508)
                     /locus_tag="VKX24_04115"
     CDS             complement(2176..>2508)
                     /locus_tag="VKX24_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003898238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 domain-containing protein"
                     /protein_id="HLJ07696.1"
                     /translation="RLKGTILPGGGEWFLAGADGFGRVDVRLQMTTHDGANIYVQYFG
                     VLELNDVTMGAIAAGAPTDFEDHYFRTNPRLETGDPRYAWVNQTLFVGKGHALPGLLI
                     EYDVYRVT"
BASE COUNT          335 a          959 c          923 g          291 t
ORIGIN      
        1 cctgacagcg tacagcctcg cccctcccga ggcgggacgg cgtagtttgc cggtggcgct
       61 ggcgggcgag gaggagcgtg ctcatggatg tcgtcgtcag cgggtcgagc gggctcatcg
      121 ggacggcgct cggggctgcg ctgcggcggg ccgggcaccg gatggtcccc atggtccggt
      181 cgtcgccggc gggtgatgcc atcggctggg accccgacca gggccgcatc gacgccgggg
      241 gactggaggg ggtcggcgcc gtcgtccacc tggcggggga gggcatcggg agcaaacggt
      301 ggaacgacgc ccagaaggcc aggatccggg acagccgggt gcgggggacg gcgctgctgg
      361 cggagacgct ggccaccctc aaccgcccgc cgaaggcgct cctgtcgggg tcggcggtcg
      421 ggtattacgg cgaccggggc gacgaggtgc tcaccgagtc gagccgggcc ggcgacggct
      481 tcctggccga ggtctgcgtg gcctgggagg cggcggccgc ccccgcccgg gaggcgggga
      541 tcagggtcag ccacctccgg acgggcatcg tcctgtccgc cgacggcggc gccctgccca
      601 ggatgctgac gccgttccgg ctcggcgtcg gcggccggct cggatcgggc tcccaatgga
      661 tgagctggat ctccctcgac gacgaggccg gcgccatcgt ccacctcctc ggcgacgacg
      721 ccccggccgg cgccgtgaac ctgaccgcgc ccaaccccgt caccaacggc gacttcaccg
      781 ccgccctcgg ccgggcgctg cggcggccgg cggcgatccc cgtcccgaag atcgccctca
      841 aagccgtcct cggcggcgag atggccgagg agctcctgct cagcagccag cgggccctgc
      901 cgacccgcct gctcgactcg ggctacacct tcgcccggcc cgacctcgcc gaagccctcc
      961 gggcggccgt cagccgctga ggccgaggtc ggccagcagg gccagcaccg aggccacgac
     1021 ggccgagccg aacagcgacg ccgccacgtc gtggaccgtc ccggcggcgc cccggccgcc
     1081 gtcgaccagc cggccgtcgg gctccaccag cagccgccgg cgctcgaagc ggccgagttc
     1141 ggacccgtct ccggccgcca cgagcagggc ggccgggtcg tgcaggacga cctcgcccca
     1201 ctcttcgagc caggtggaca ccatcggttc gaggacgggc gccgtggcca tcaaccgggc
     1261 cgccatccgg gcgtcgagcc gggtggcgac ggtggcgtcg agcggcacca gcacggcccc
     1321 cgggacggcc agcacggccg ccgctgcccc ggggtcggac ccgaagttgt gctccaccgc
     1381 ccgcagctcg ccccggtgct cgaccggccg gagcgccccg cccatgatcg tcacctcggg
     1441 cgggcgcacg ccggcggcgg tgatggccgc cacgttggtg agcggcccga tggccagcag
     1501 cgcctcggcg cccgacgccg ccaccgcctc caccacggcc gacagatctt ccccggcccc
     1561 ggcgccgccg gggctccccc cggtgccgcc cccgccctcg ggaccgccgg ccccggccac
     1621 gaccggcacc gaccccaggt cgaccccggc gccggccagc aggccgacgg cgacggcggc
     1681 ccggcgctcc ggatccggcc cgaccgtgga cacgccgacc agcgagaccg ccgggtgggc
     1741 cacggccgcc aacagcgcca cggcgtcgtc gacgttgctg ccttcgtcga ccacgcccgc
     1801 cttccggacc ggcgggttga tatcggtgtc gatccacaga cgcttccggt gcgtgcccac
     1861 cgacccgttc tagccctcct gacgccccag gagcttcgag gagcacgtct tcctgacgtc
     1921 cgagtttctc ggacggggcg aggtgtggtg tactcgacag agcggcagcc caggctcgca
     1981 tccggccgcg ctcaccacag agaggcaggc gtcaccgtat gccgagatca aacagggccg
     2041 ctgccggggg ccgctcacgc gcctcggtcc gggcgaagaa ccggaagctc aaggccgacg
     2101 ctccgccgga gaagcggcgc ggcaaggccg acaagtagcc ggccgaacgg cgtcgcgccc
     2161 gacgccggcc ggcgctcagg tgacccggta gacgtcgtac tcgatcagca gcccgggcag
     2221 ggcgtggccc ttgccgacga agagcgtctg gttgacccag gcgtagcggg ggtcgccggt
     2281 ctcgagccgg gggttcgtgc ggaagtagtg gtcctcgaag tcggtcgggg ccccggcggc
     2341 gatggcgccc atcgtcacgt cgttgagctc gaggacgccg aagtactgga cgtagatgtt
     2401 ggccccgtcg tgggtcgtca tctgcaaccg gacgtcgacg cgcccgaaac cgtcggcgcc
     2461 ggccaggaac cactccccgc ccccgggcag gatcgtgccc ttcagccg
//
LOCUS       DATGJT010000240         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1278023, whole genome shotgun sequence.
ACCESSION   DATGJT010000240 DATGJT010000000
VERSION     DATGJT010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1278023"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..2390
                     /locus_tag="VKX24_04120"
     CDS             210..2390
                     /locus_tag="VKX24_04120"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07697.1"
                     /translation="MFLQQEKRRRAVPARRGLVTTLAGLVAVGTGVGILAPAQAAAPT
                     GQSGYIQTMAGNMQNYQQFGYSGDGGPATAAQLYNPRAIGFAPDGSVYIADALNERIR
                     KIDGSGVISTFAGSGPSDSSGALQNGATPTGPDGDGGPATQAVFNQPHGVAIDSKGNV
                     YVADSNDQRIRKIDGSGTITTIAGTGDPKAPPCPTKANTCPAQGSGLKFPKSMFMAPG
                     DKLYVADSGNNMIRMLDLNANPVTITIVAGNTQSKRYGGDGGRAVDAQLNTPEGMALD
                     KAGNLYIADSGNNLVRKVDTSGTITTIAGDTNAATTAANAKTPVPPSDSAGDGGPAAA
                     AHLDGPRGIAVDDLGNIYIAQEGGDPTTDTTGARIRRIDPSGTITTIAGDGKTSGRGA
                     VAGDPGPVPAGQAEFNTLHDLAVDSAGNLWIADSKNNLVRVVFDPAHAPAVSAGAAPA
                     PTAPGAAAPPAAQPGTPAAGAPGRSGYWMLGSDGKVYGFGDAKPMGDASTALPAGAKA
                     MHIEPTPDAGGYWIVSDDGAVYAFGDAASLGNVNAADLGPHEKATSLSATPTGKGYWI
                     FTTKGRVFPFGDAQPFGDLSKVNLNGPVQSSIATPSGKGYYMVASDGGVFAFGDAAFR
                     GSMGATKLNQPVQSLVPTRDGLGYWLVASDGGIFSFGSAQFRGSMGSTKLNKPVVGMV
                     RYGTGYLMVAADGGIFSFSDLPFVGSLGDNPPAHPIVFAATLDS"
BASE COUNT          397 a          968 c          759 g          280 t
ORIGIN      
        1 ccagaagctg ggagaaatcc cccaactggg cttcaacggg cctctaagaa accttcaacg
       61 cgaaagggat cgaagggaca ggcggagaag gccacccccg accactcccg gccccccggg
      121 agccgggctc ggcggccccc gccaccgaga tgtccctcgc ttcggcgcgc ccactcgccg
      181 gacttgctcg accccccagg aggagcacga tgttcctaca gcaggagaag cggcggcggg
      241 cggtgccggc ccgccgaggg ctcgtcacca cgctcgccgg cctcgtggcc gtcggcaccg
      301 gtgtcggcat cctcgccccg gcccaggcgg ccgccccgac cggccaatcg ggctacatcc
      361 agaccatggc cgggaacatg cagaactacc agcagttcgg ctactcgggc gacggcggcc
      421 cggccaccgc ggcccagctc tacaaccccc gggccatcgg cttcgccccc gacgggtccg
      481 tctacatcgc cgacgccctc aacgagcgca tccgcaagat cgacggcagc ggggtcatct
      541 cgacgttcgc cgggagcggc ccgtccgact ccagcggcgc gctgcagaac ggcgccaccc
      601 cgaccggccc cgacggcgac ggcggcccgg ccacccaggc ggtgttcaac cagccccacg
      661 gcgtcgccat cgactccaag ggcaacgtct acgtcgccga cagcaacgac cagcggatcc
      721 gcaagatcga cggcagcggg acgatcacca cgatcgccgg caccggcgac cccaaggcgc
      781 cgccctgccc gaccaaggcc aacacctgcc cagcgcaggg ttcggggctc aagttcccca
      841 agtcgatgtt catggcgccc ggcgacaagc tctacgtggc cgacagcggc aacaacatga
      901 tccgcatgct cgacctcaac gccaacccgg tgacgatcac catcgtggcc gggaacacgc
      961 agtcgaagcg ctacggcggt gacggcggcc gggcggtcga cgcccagctc aacacccccg
     1021 agggcatggc cctcgacaag gccgggaacc tctacatcgc cgacagcggc aacaacctgg
     1081 tccgcaaggt cgacaccagc gggacgatca ccacgatcgc cggcgacacc aacgccgcca
     1141 cgacggcggc caacgccaag acgcccgtcc cgccgagcga ttcggccggc gatggcggcc
     1201 cggccgccgc ggcccacctc gacggccccc gcggcatcgc cgtcgacgac ctcggcaaca
     1261 tctacatcgc ccaggagggc ggcgatccga cgaccgacac caccggggcc cggatccgcc
     1321 gcatcgaccc gtcgggcacg atcaccacca tcgccggcga cggcaagacc agcggccgcg
     1381 gcgcggtggc cggcgacccc ggcccggtcc cggccggcca ggcggagttc aacacgctgc
     1441 acgacctggc cgtcgactcc gccggcaacc tctggatcgc cgacagcaag aacaacctcg
     1501 tccgcgtggt cttcgacccc gcccacgccc cggccgtcag cgccggtgcg gcgccggccc
     1561 cgacggcgcc gggggccgcc gcgcctccgg ccgcccagcc cggcactccc gccgccggcg
     1621 cgcccggccg gtccggctac tggatgctcg gcagcgacgg caaggtctac ggcttcggcg
     1681 acgccaagcc gatgggagac gccagcacgg ccctcccggc cggcgccaag gcgatgcaca
     1741 tcgagccgac gcccgacgcc ggcggctact ggatcgtcag cgacgacggc gccgtctacg
     1801 ccttcggtga cgccgcctct ctcggcaacg tcaacgccgc cgacctcggc ccgcacgaga
     1861 aggcgaccag cctgtcggcc accccgaccg gcaagggcta ctggatcttc accaccaagg
     1921 gccgcgtctt ccccttcggc gacgcccagc ccttcggcga cctgtcgaag gtcaacctca
     1981 acggtccggt ccagagctcg atcgccactc cgtcgggcaa gggctactac atggtcgcct
     2041 ccgacggcgg ggtgttcgcc ttcggcgacg ccgccttccg gggttcgatg ggtgccacga
     2101 agctcaacca gccggtccag tcgctcgtcc ccacccggga cggcctgggc tactggctgg
     2161 tcgcctccga cggcggcatc ttctccttcg gcagcgcgca gttccggggg tcgatgggat
     2221 cgacgaagct caacaagccg gtggtgggga tggtccgcta cggcaccggc tacctgatgg
     2281 tggcggccga cggcggcatc ttctccttct ccgacctgcc gttcgtcggg tcgctgggtg
     2341 acaacccgcc cgcccacccg atcgtcttcg ccgccaccct cgattcctag ccggacgtct
     2401 tccc
//
LOCUS       DATGJT010000241         3270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_32789, whole genome shotgun sequence.
ACCESSION   DATGJT010000241 DATGJT010000000
VERSION     DATGJT010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3270
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32789"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VKX24_04125"
     CDS             complement(<1..184)
                     /locus_tag="VKX24_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07698.1"
                     /translation="MSSLSSAGSLNSAPGRPLGAIAGAGTIQVAADSPGGLLAALEAA
                     LPGAAGGRADTARPPTG"
     gene            complement(181..>3270)
                     /locus_tag="VKX24_04130"
     CDS             complement(181..>3270)
                     /locus_tag="VKX24_04130"
                     /inference="COORDINATES: protein motif:HMM:NF020243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ07699.1"
                     /translation="PIGAPAYPVWSNTTAAEHGAEPAGIRTLLSRQVAEPVRFVDQVE
                     AMYAAGARVFVECGPGRVLTGLVGKILGDRPHTAVACEVSGEPGLPRFLEALARLATA
                     GVALDVAPLFAGRSLRAVTPEAVPARPGWVIDGHLTRTAAGDALAGGLRPSGEFAAQA
                     GPPLAATPAPAAPPAPPPSPAGPFAAAAMAPPRPTSAQPGPAATAGEGGGSGRDAVVL
                     EYFRATREAIAAQRDVMLSYLGVPGGPSPEDGAAAAAGVLAGLGGDRPRALPVPQSPP
                     SAAPHDGAPGRHPVTPSGHPPAPEGHPAGPQPLSEAALADAILGIVGRRTGYPREMLD
                     ADLDLEADLSIDSIKRTEIIMELTNQLRSGGAPPPEGAVEALARLKTIAAMVAWMLEH
                     DPRRSPSPGPVTGSTPEPLAATDTGSAAAVTSPAAVTSPATVTASACTNSVGPRAASA
                     TGTGSAGGEPAAPPVIGPPTRYLVKVVTEPTVVVTEPGLAQEPRPGLAGRRFVVVDDE
                     GGVGAAVASALRQHGADALLLGVHHDLEAACARTDGVIHLGALRLGDTPILPAAFAPL
                     RAALVGGAQTVLVVTGAGGRFAHPSDDAGIDPTPGLGLWGLARTIAAEYPAVRVRAVD
                     VDVREDPERIAAVLLAEVGIPPAVPGSAAGGHATVVGYRNETRSRLEVVPAELTGAPA
                     GSPTGAPTGPLGDALPAAAEALGLGPESVVLLTGGGRGITAAVAAALARACGCRIELL
                     GRSPVPAGNEPAAIAAAADATALRPAIVARGIAGTKGHPALVEAEVRRILAAREVRAT
                     LAAVGATASAVHYHQADITDPRQVQEVVDGIYQRWGRLDGVIHGAGVLHDRRIADKTP
                     ESFAQVFATKVDGARALAAALEGRPPLSFLVMFGSISGVFGNAGQVDYAAANDALDTL
                     ARLWERSSSRSRAGAAVRAGDLLAAAEGIAAPAPLAERILSVDWGPWAAAAGGMVSPE
                     LERDYARRGIDLIDPEAGIAALLSELAWGDPAESQVVYFTGALEAFVAPPSAAGGPS"
BASE COUNT          399 a         1176 c         1332 g          363 t
ORIGIN      
        1 gaccggtcgg cggcctcgcg gtgtcggctc gaccaccggc ggcccccggt agcgccgcct
       61 cgagggcggc gagcagccca cccggggagt cggcggcgac ctggatcgtg ccggcgccgg
      121 cgatcgcgcc cagggggcgg ccgggggcgc tgttcaggct ccctgcggag ctcaggctgc
      181 tcacgagggg cccccggccg ccgagggcgg agcgacgaac gcctcgaggg caccggtgaa
      241 gtagacgacc tggctctcag cagggtcgcc ccaggcaagt tcggacagca gcgcagcaat
      301 ccccgcttcg ggatcgatca ggtcgatccc gcggcgtgcg tagtcgcgct cgagctccgg
      361 ggagaccatc ccgccggcgg cggccgccca cgggccccag tcgaccgaga ggatgcgctc
      421 tgccagcggt gccggcgccg cgatgccctc ggcggcggcc aggaggtcgc cggcccggac
      481 cgcggcgccc gcccggctcc gggaggacga ccgctcccag aggcgggcca gggtgtcgag
      541 ggcgtcgttg gcggcggcat agtcgacctg gccggcgttg ccgaagacgc cggagatgct
      601 cccgaacatc accaggaagg agagtggcgg ccggccctcc agggcagccg ccagcgcccg
      661 ggcgccgtcg accttggtgg cgaatacctg ggcgaagctc tccggcgtct tgtccgcgat
      721 gcgccggtcg tggagcaccc cggcgccgtg gatcaccccg tccagccggc cccagcgctg
      781 gtagatgccg tcgacgacct cctggacctg ccggggatcg gtgatgtccg cctggtggta
      841 gtgcaccgcc gaggcggtgg ccccgacggc ggcgagcgtg gctcgcacct cccgcgccgc
      901 caggatccgg cggacctcgg cctccaccag ggccgggtgc cccttggtcc cggcgatgcc
      961 ccgggcgacg atcgccgggc ggagagcggt ggcgtcggcg gctgcggcga tcgcggcggg
     1021 ctcattgccg gcgggaaccg gggaccggcc gagcaattcg atgcggcaac cgcaggcccg
     1081 ggccagcgca gcggcgaccg ccgcggtgat cccgcggcca ccgccggtca gcagcaccac
     1141 cgactccgga ccgagaccga gcgcctcggc cgcggccggg agggcatccc cgaggggacc
     1201 ggtgggcgcg ccggtgggcg aaccggcggg cgccccggtc aattcggccg ggaccacctc
     1261 gaggcgggac cgggtctcgt tgcggtagcc gacgacggtg gcgtggccgc cggctgcgga
     1321 gcccgggacg gccgggggga tgcccacctc ggcgagcagg acggcggcga tccgctccgg
     1381 atcctcccgc acgtcgacgt cgacggcgcg gacccggact gccgggtact cggcggcgat
     1441 cgttcgggcc aggccccaca ggccgagtcc cggcgtcggg tcgatgccgg cgtcgtcgct
     1501 ggggtgggcg aagcggccgc cggcgccggt cacgacaagg acggtctggg cacccccgac
     1561 gagtgctgcc cggagcggag cgaaggcggc cggaaggatc ggggtgtctc ccagccgcag
     1621 cgcgccgagg tggatgacac cgtcggtccg ggcgcaagcc gcctcaaggt cgtggtggac
     1681 cccgagcagc agggcatcgg cgccgtgctg gcgcagggcc gaggcgaccg ccgccccgac
     1741 cccgccctcg tcgtcgacga cgacgaagcg gcgcccggcc agcccgggcc ttggctcctg
     1801 cgcgaggcca ggctcggtaa cgactacggt tggctcggtg acaaccttga ccaggtagcg
     1861 cgtggggggc ccgatcaccg gaggagcggc gggctcgccg ccggccgagc cggtgccggt
     1921 ggcgctggcg gccctggggc cgacggagtt ggtacaggcg gaggcggtga ccgtggcggg
     1981 gctggtgacc gcggcggggc tggtgaccgc ggcggcggag ccggtatccg tggcggccag
     2041 cggctctggt gtggagccag tgaccggtcc cgggctgggc gagcgccgcg gatcgtgctc
     2101 gagcatccaa gcaaccatgg cggcgatggt cttcagccgg gccagcgcct cgaccgcccc
     2161 ctccggcggc ggagcgccgc cgctgcggag ctggttggtc agctccatga tgatctcggt
     2221 ccgcttgatc gagtcgatcg agaggtcggc ctcgaggtcg aggtcggcgt ccagcatctc
     2281 ccgggggtag ccggtgcggc ggccgacgat gcccaggatg gcgtcggcga gcgccgcctc
     2341 ggagagcggc tgcgggccgg ccgggtgccc ttccggcgcc ggcgggtgcc cgctgggcgt
     2401 gaccgggtgc cgtccgggtg cgccatcatg gggagcagcc gacggcgggg actgggggac
     2461 cgggagggcc ctggggcgat cgcccccgag gcctgccagc actcccgctg cggcagccgc
     2521 tccgtcctcg ggcgatggcc caccgggcac gccgaggtag gagagcatca catcacgctg
     2581 ggcggcgatg gcttcccggg tcgcccggaa gtactcgagc accacggcgt ctcggccgct
     2641 gcctcctccc tcgccggccg tcgcggccgg gccgggctgg gccgaggtgg gccgaggtgg
     2701 ggccatggcg gcggcggcaa acgggcccgc cggcgagggc ggtggcgccg gcggagcggc
     2761 cggagccggc gtggccgcca ggggcgggcc ggcctgggcg gcgaactcgc cgctcgggcg
     2821 cagtccccct gccagcgcgt cgcccgccgc ggtgcgggtc aggtggccgt cgatcaccca
     2881 gccgggccgg gccgggaccg cctcgggggt gacggcacgg agcgagcgcc cggcgaacag
     2941 cggggcgaca tcgagcgcaa cgccggcggt ggccagccgg gcgagtgcct ccaggaagcg
     3001 gggcagcccg ggctcgccgc tgacttcgca ggcgaccgcg gtgtgcggcc ggtcaccgag
     3061 gattttgccg accaggccgg tcagcacccg ccccggcccg cactcgacga acacccgcgc
     3121 cccggctgca tacatcgcct cgacctggtc gacgaagcgg accggctcag ccacctggcg
     3181 ggacagcagg gtccggatgc cggccggctc ggcgccgtgt tcggcggcgg tcgtgttgga
     3241 ccacaccggg taggccggag ccccgatggg
//
LOCUS       DATGJT010000242         3248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_32947, whole genome shotgun sequence.
ACCESSION   DATGJT010000242 DATGJT010000000
VERSION     DATGJT010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32947"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2089
                     /locus_tag="VKX24_04135"
     CDS             <1..2089
                     /locus_tag="VKX24_04135"
                     /inference="COORDINATES: protein motif:HMM:NF024991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ07700.1"
                     /translation="PGTTAAEELFAALAAPDGLTAEVSTFGRKEVLQAICDRLPAGAD
                     IGQVVALASEFVGTDHCVSIGVPERLWTNDILRELDGTVVPAHRDLLRWTTPDMLATE
                     TRLIDGARSRADDGVGIAGSDHVTAAVAARPTLSAEQRAMIERLCGSGAGVEVVVGVA
                     GSGKTFALAAARDAWEAAGHRVLGAALSARAAAELQDGSGIPSATLARLLADLDRPDA
                     GGLAPHTVLVVDEAAMIGTRQLARLLDHARTDGAKVVLVGDHRQLPEIAAGGAFVGLA
                     VGLDAVELTENRRQREAWERDALAELRHGNPDLALAAYQAHDRLHQADTADGIREHLV
                     DGWWAARKAGGRHLMVAVSHRDVDDLNLRARQRLSAAGWLGDDVAIGERSFAVGDEIV
                     ATRNDYHIMIFNGTRATITRIDHEGRRIEAVDDRHRPLVIPFAYAEAGHLNWGYATTL
                     HKAQGATVDQTFLLADDTLHRERSYSGMSRGTEANDLYVAVGDQEEHHGAPDVDDLND
                     MLHRTVKRSDTKTLALQDFLSTRQSARNPADKLRAERLRPAPIVKRAPRAPFAELSAW
                     QRDQQRALANLAQAHRERQAAEEALGKLGGHRRLTRRHDRQRAELRLDRAVGAEAWAE
                     TRLQLIGERRTRLDEELAEWKAWTVEHGPKAHRFRTVDSLLAEHHRQRQPTVERRLGV
                     RDAGRDVGIDLGL"
     gene            complement(2316..>3248)
                     /locus_tag="VKX24_04140"
     CDS             complement(2316..>3248)
                     /locus_tag="VKX24_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012948535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ07701.1"
                     /translation="FAISWRNPGKEHGDWGLDTYAEAFIRAIDVARDVTGSDDVNALG
                     MCAGGITMSTALSHLAATGDTRVHSASFGVTLLDFSIPAMVGLFQSRPLLSLARRRSR
                     RAGVLSGDSLASVFTWMRPNDLVWNYWVNNYLMGKKPPAFDILAWNADKTNLPGRLHE
                     QFLDIFGDNLLAKPGGLTVLGTPVDVSSIKYPTYFTGGLTDHLTPWQGCYRATQLVSG
                     ETTFVLSPTGHIQTQVSPPGNPKAHYFVAPDPGPDPEEWRSRAERRPGTWWEHWADWI
                     IERGGGQRPAPSRLGNRRHPVLDPAPGRYVLDSA"
BASE COUNT          533 a         1180 c         1095 g          440 t
ORIGIN      
        1 gcctggcacg accgcggcgg aggaactctt cgccgctctg gccgctcccg acgggctgac
       61 cgccgaggtc tcgacattcg gtcgcaagga ggtcctccag gcgatctgcg accgcctgcc
      121 cgccggtgcc gacatcggcc aggtcgtggc gctcgcctcc gagttcgtcg gcaccgacca
      181 ctgtgtgtcg atcggggtcc cggagcggtt gtggacgaac gacatcctcc gggaactcga
      241 cggcaccgtc gtccccgccc accgggacct gctgcgctgg acgaccccgg acatgctggc
      301 gacggaaacc cgcctcatcg acggcgcccg cagccgggcg gacgacgggg tcggcatcgc
      361 cggatccgac cacgtgaccg ccgcagtggc cgcccgcccg acgctgtccg ccgagcagag
      421 ggccatgatc gagcggctgt gtggatcggg tgcgggggtc gaggtggtcg tcggtgtggc
      481 cggctcgggc aagacgttcg ccctggcggc cgcccgcgac gcctgggagg ccgcggggca
      541 ccgggtcctc ggcgcggccc tctcggcccg ggccgcggcg gaactccagg acggctcggg
      601 tattccctcg gccaccctgg cccgtctcct ggccgacctc gaccggcctg acgccggcgg
      661 tctggcgccg cacactgtcc tggtcgtcga cgaagcggcc atgatcggca cccgccagct
      721 ggcccgcctc ctcgaccatg cccgcaccga cggcgcgaag gtcgtcctcg tcggcgatca
      781 ccgtcaactg ccggagatcg ctgccggcgg cgccttcgtc ggcctggccg tcggcctcga
      841 cgcggtcgaa ctcaccgaga accgccgcca gcgggaagcc tgggaacggg acgccctggc
      901 cgagctgcgc cacggcaacc ccgacctcgc cctcgccgcc taccaggccc acgaccgact
      961 ccaccaggcc gacaccgccg acgggatccg agaacacctc gtcgacggct ggtgggccgc
     1021 ccgcaaagcc ggcggccgcc atctcatggt cgccgtctcc caccgcgacg tcgacgacct
     1081 caacctccgg gcccgccagc ggctcagcgc cgccggttgg ctcggcgacg acgtggccat
     1141 cggcgagcgc tccttcgccg tcggcgacga gatcgtcgcc acccgcaacg actaccacat
     1201 catgatcttc aacggcaccc gggccaccat cacccgcatc gaccatgaag gccgccgcat
     1261 cgaggccgtc gacgacaggc accggccgct cgtgatcccc ttcgcctacg cggaagccgg
     1321 ccacctcaac tggggctacg ccacgacgct ccacaaggcc cagggcgcca ccgtcgacca
     1381 gaccttcctc ctcgccgacg acaccctcca ccgggaacgc agctactccg gaatgtctcg
     1441 cgggaccgag gccaacgacc tctacgtggc cgtcggggac caggaggagc accatggtgc
     1501 accggacgtc gacgacctca acgacatgct ccatcggacg gtgaaacgtt ccgacaccaa
     1561 gacgctcgcc ctgcaggact tcctctcaac ccgccagtcg gccaggaacc cggccgacaa
     1621 actccgagcc gaacggctcc ggccggcacc catcgtcaag cgggctcccc gagcgccctt
     1681 cgccgaactg agcgcatggc agcgagacca gcagcgagcg ttggccaacc tggcccaagc
     1741 ccaccgggaa cgacaagccg ccgaggaagc actcgggaag ctgggcggtc accggcgcct
     1801 cacccggcgt cacgaccgcc agcgagccga actacggctc gaccgggccg tcggagcgga
     1861 agcctgggcg gaaaccagac tccagctcat cggcgaacgc cgaacgcgcc tcgacgaaga
     1921 gctggccgag tggaaggcat ggaccgtaga acacggcccc aaggcccacc gcttcagaac
     1981 agtcgactcg ctcctcgccg aacaccatcg acagcgccag cccaccgtcg aacgacgcct
     2041 cggcgtccgc gacgcaggcc gggacgtcgg gatcgacctc ggcttgtaga caacggccaa
     2101 tgaaggcact cctggcgccg gaacggtggg gtgcgggcac aggagcggaa tccttggcgc
     2161 ccctatgcgg ccggcacacc gcgcttgatg cgggtcacgg gcacgcagcg cgacgaacca
     2221 ccgtgggtgc cctgaccagc cagagagagg ttgtcatgac cgcgtgggtc ctagtcgtca
     2281 ggctgcggcc gtcgtctcca tacctggcca gcccctcaag cggaatcgag tacgtaacgc
     2341 cccggagcgg ggtcaagcac ggggtggcgc cggtttccga gtcttgacgg ggcgggtcgc
     2401 tgtccgccac cccgctcgat gatccagtcg gcccagtgtt cccaccacgt cccggggcgc
     2461 cgctccgccc gacttcgcca ttcttcgggg tccggcccgg gatcgggcgc cacgaagtag
     2521 tgggccttcg ggttgcccgg cggtgacacc tgcgtctgga tgtgcccggt gggcgagagc
     2581 acgaacgtcg tctccccgga gacgagctgg gtggcgcggt agcagccttg ccatggcgtg
     2641 aggtggtcgg tcaggccacc ggtgaagtac gtggggtact tgatgctgga gacgtcgacc
     2701 ggagtgccga gaaccgtcag gccaccgggt ttggccagga gattgtcgcc gaagatgtcg
     2761 aggaactgct cgtggagccg accggggagg ttcgtcttgt cggcgttcca ggccaggatg
     2821 tcgaacgccg gcggcttctt tcccatgagg taattgttca cccagtagtt ccacacgagg
     2881 tcgttcggtc gcatccaggt gaacaccgat gccaaggagt cgccgctgag gacgccggcc
     2941 cgtctcgacc ggcgtcgggc cagggagaga agcgggcggg actgaaacag gcccaccatg
     3001 gcggggatgg agaagtcgag gagggtcacg ccgaacgacg cgctgtggac gcgggtgtcc
     3061 cccgtggcgg cgaggtgcga cagcgcggtc gacatcgtga tgccaccggc gcacatgccc
     3121 aaggcgttca cgtcgtcgct gccggtgacg tctcgagcga cgtcgatggc ccggatgaat
     3181 gcttcggcgt aggtgtcgag cccccagtcg ccatgctcct tgccggggtt ccgccagctg
     3241 atggcgaa
//
LOCUS       DATGJT010000243         3747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_863647, whole genome shotgun sequence.
ACCESSION   DATGJT010000243 DATGJT010000000
VERSION     DATGJT010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_863647"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..946)
                     /locus_tag="VKX24_04145"
     CDS             complement(<1..946)
                     /locus_tag="VKX24_04145"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HLJ07702.1"
                     /translation="MNRPAGLAATRRARLRTAVALTVVLAAGELVAGVLGHASALLAD
                     AGHNLTDVVALAASLVALSWAGRPRNDQRSFGNHRATILAALFSSGVLAVVTASIVAV
                     SVGRLLHPQPVDGAVLAGVAAAAVFANGLAALALREPGGSDLNMRAAFLHVVADVASA
                     GFALAAGVAIVIGGTAAELADPAAALAVSAAIIVQVVRLARASVGVLLESTPDDVDLG
                     SLREAITAVEGVSEVHDLHVWSLSSEVRALSAHLVASGHPSLEDAQDLAERVRAAICG
                     PFALAHTTFELECERCSDTEDPCGVVASAEPAVAAGPGR"
     gene            complement(943..1806)
                     /locus_tag="VKX24_04150"
     CDS             complement(943..1806)
                     /locus_tag="VKX24_04150"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLJ07703.1"
                     /translation="MTEAPGPALVVLAAGKAKRYGGGLKPLAPVGPDGETILDLLGSD
                     AVAAGFTSIVIVVNPDTGDTIREHVGSAWPGSIDVSFAVQPSARGTVHAALCGVRELD
                     GDALFGVANADDLYGSAAMAILAGHLRDPEAGDALVAFRLDRAVIGESPVTRGVCETG
                     TDSRLVRIDERRGVTRRADGTFSTGDDRSPSVLEAATLVSMNLWGFTPSIVDEFASAM
                     DASTEGEVLLPEVVGELISRPSRPRAVAVLPTDSRAVGVTHPDDLALVQADVLDQIER
                     GERPRRAWAGQ"
     gene            complement(1803..2741)
                     /locus_tag="VKX24_04155"
     CDS             complement(1803..2741)
                     /locus_tag="VKX24_04155"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015738968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HLJ07704.1"
                     /translation="MNGPRGIVVRSCGIAVPDKVLTNDDLEARLDTSDAWITERTGIR
                     ERRIGGTTSELAAEAGRQALERAGLQPTDIDALVLATTTADAIAPATASSVQTLLGMR
                     TVGAFDLNAGCSGFVYGLVVSAGLAATGADRVLLVGADTLSRITDWEDRTIAVLVGDG
                     AGAVVVEAVEGPGNLLSHNLHSDGSLRHLLYCDHGGYLWMDGREIFRKAVRVLVESAE
                     QAMADAGVGVGDIAMLVPHQANLRIIQAACQRLGLPEEKTAIVIDRYGNTSSASIPLA
                     LDDAVVTGRVGDGDLVLLSGFGAGMSWASAVLRWGA"
     gene            complement(2738..>3747)
                     /locus_tag="VKX24_04160"
     CDS             complement(2738..>3747)
                     /locus_tag="VKX24_04160"
                     /inference="COORDINATES: protein motif:HMM:NF014820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HLJ07705.1"
                     /translation="GCVRGQSWLRKSSLGDVPIVNVDNSCAGGTTALHLGSHSAVAQD
                     RPVLVVGVEKMWTGDRAGTLEAIEAGLPADYRADMHTRLAEQGNPAGSILMGLNAAWA
                     EQFMTERGATVEQFAATAVKARRNGSLNPLAQCQQAVTLEEVLGSTQVAGVLTRLMCS
                     SFTDGAAALVLAGSPSGAARPVAKMVGSLARSGWGNLDYHDRLAETSRAAYEAFGLGP
                     EDFDIVELHDATSAEELFALESLGIFGPGEAGPATLAGETDIGGRGITVNPSGGLVAR
                     GHPLGATGIAQVVEIISQLRGRCGARQVAGARLGFAVNTGGVVDGDAGYIGITAVAGV
                     R"
BASE COUNT          510 a         1341 c         1406 g          490 t
ORIGIN      
        1 agcggccggg accggcggcc accgccggtt ccgctgaggc cacgactccg caggggtcct
       61 cggtgtcgga gcagcgctcg cactcgagct cgaacgtggt gtgggcgaga gcaaaggggc
      121 cgcagatggc ggcccggacg cgctcggcga ggtcctgggc gtcctccagg ctcgggtggc
      181 cggaggcgac caggtgggcg gacagcgccc ggacctcgct cgagaggctc cacacgtgga
      241 ggtcatggac ctcgctcaca ccctcgacgg cggtgatcgc ctcccggagg gagccgaggt
      301 cgacgtcgtc gggcgtcgac tcgagcagga ccccgacgct cgcccgcgcc agccgcacca
      361 cctggacgat gatcgccgcc gacaccgcga gcgcggcggc cgggtcggcg agttcggccg
      421 ccgtcccccc gatgacgatg gccaccccgg cggccagggc gaagccggcc gaggcgacgt
      481 ccgccaccac gtggaggaac gccgcccgca tgttcaggtc gctgccgccc ggctcgcgca
      541 aggccagggc cgcgagtcca ttggcgaaga ccgctgccgc ggccacgccg gccaggacgg
      601 cgccgtcgac cggctgcggg tgcaggagcc ggccgacgga gacggcgacg atcgacgccg
      661 tcacgactgc cagcacgcct gagctgaaca gggcggccag gatcgtcgcc cggtggttgc
      721 cgaaggagcg ctggtcgttg cgagggcgcc ccgcccagct gagggcgacg agcgaggcgg
      781 ccaaggccac gacgtcggtc aggttgtgcc cggcgtctgc gagcaacgcc gaggcgtgcc
      841 cgaggacgcc ggcgaccagc tccccggcgg cgaggaccac ggtgagcgcc acggccgtcc
      901 gcagccgcgc ccggcgcgtg gcggcgaggc cggccggtcg gttcactgac cggcccaggc
      961 tcgtctcggg cgctcacccc gttcgatctg gtcgagcacg tcggcctgca ccagggcgag
     1021 gtcgtcgggg tgggtcacgc cgacggcccg gctgtcggtc ggcaggacgg cgaccgcccg
     1081 gggtcggctc ggcctggaga tgagctcacc cacgacttcg ggcaggagca cctcgccctc
     1141 ggtcgaggcg tccatggcgg aggcgaactc gtcgacgatc gacggtgtga agccccacag
     1201 gttcatcgag acgagcgttg ccgcctcgag gaccgacggg gagcggtcgt ccccggtcga
     1261 gaacgtcccg tccgcgcggc gggtgacccc gcgccgttcg tcgatccgga cgaggcggct
     1321 gtccgtcccg gtctcgcaca cgccccgggt caccggggac tcgccgatca ccgcccggtc
     1381 gagtcggaag gcgacgaggg cgtcacccgc ctcggggtct cgcagatgcc cggcgaggat
     1441 cgccatcgcc gccgagccgt agaggtcgtc ggcgttggcc acgccgaaaa gcgcgtcccc
     1501 gtcgagctcg cgcacgccgc acagtgcggc gtgcaccgtg ccccgggcac tcggctgcac
     1561 ggcgaatgag acgtcgatgg acccgggcca cgccgagccc acgtgctccc ggatggtgtc
     1621 gcccgtgtcg gggttgacca cgatgacgat ggacgtgaaa ccggcggcga cggcgtcgct
     1681 cccgagcagg tcgaggatcg tctccccgtc cgggccgacg ggggcgagcg gcttcagacc
     1741 tccgccgtag cgcttggcct tccccgcggc caggaccacc agcgctggtc cgggcgcttc
     1801 ggtcatgccc cccagcgtag gacggcgctg gcccagctca tcccggctcc gaagccgctg
     1861 aggaggacga ggtcgccgtc cccgacccga ccggtgacga ccgcgtcgtc gagggcgagc
     1921 gggatcgagg ccgaggaggt gttgccgtac cgatcgatca cgatcgccgt cttctcctcg
     1981 ggcaggccca gccgttggca ggccgcctgg atgatccgga ggttggcctg gtgggggacg
     2041 agcatggcga tgtcgccgac gccgacgccg gcgtcggcca tcgcctgttc ggcggactcg
     2101 acgaggaccc gcacggcctt ccggaagatc tcgcggccgt ccatccacag atagccaccg
     2161 tggtcgcaat agagcagatg ccggagcgac ccgtccgaat gcagattgtg gctgaggagg
     2221 ttgcctgggc cttcgaccgc ctcgacgacc acggcgcccg cgccgtcccc gaccaggacg
     2281 gcgatcgtgc ggtcctccca gtcggtgatc cggctcaggg tgtcggcgcc gacgagcagg
     2341 acccggtcgg cgccggtggc ggcgaggccg gcgctcacca ccagcccgta gacgaagccg
     2401 gagcaccccg cgttgaggtc gaacgccccg acggtgcgca tgccgaggag cgtctggacg
     2461 ctggaggccg tggccggtgc gatcgcgtcg gccgtcgtgg tcgccagtac cagggcgtcg
     2521 atgtccgtcg gctggagtcc ggcccgctcg agcgcctgac gaccggcctc ggcggcgagt
     2581 tccgaggtcg tcccgccgat ccggcgttcg cggatgccgg tgcgttcggt gatccaggcg
     2641 tcgctcgtgt ccagcctggc ttcgaggtcg tcgttcgtga ggaccttgtc ggggacggcg
     2701 atgccgcagc tgcggacgac gatgccccgg ggcccgttca tcggaccccg gcgaccgcag
     2761 tgatgccgat gtacccggcg tcgccgtcca ccaccccgcc ggtgttgacc gcgaagccca
     2821 ggcgggcccc ggcgacctgc ctcgccccgc agcgcccccg cagctggctg atgatctcga
     2881 ccacctgggc gatgccggtc gcaccgaggg ggtggccccg ggcgacgagg ccgccggaag
     2941 ggttgaccgt gatgccccga ccgccgatgt cggtctcgcc ggcgagggtg gccgggccgg
     3001 cctcccccgg gccgaagatc ccgagcgact cgagggcgaa gagctcctcc gcgctcgtgg
     3061 cgtcgtggag ctccacgatg tcgaagtcct ccggaccgag gccgaaggcc tcgtatgcgg
     3121 cccgggaggt ctcggccagc cggtcgtggt agtcgaggtt gccccacccg gaccgggcga
     3181 gagacccgac catcttggcc acgggccggg cggcaccgct ggggctgccg gcgaggacca
     3241 gggccgccgc tccgtcggtg aaggagctgc acatgagccg ggtgaggact ccggcgacct
     3301 gggtcgaacc gaggacctcc tcgagcgtga cggcctgctg gcactgcgcg agcgggttga
     3361 gggacccgtt gcgacgggcc ttgaccgctg tggcggcgaa ctgctcgacg gtggcgccgc
     3421 gctcggtcat gaactgctcc gcccacgcgg cattgaggcc catgaggatg cttccggccg
     3481 ggttgccctg ctcggccaag cgggtgtgca tgtcggcgcg gtagtcggcg gggaggcccg
     3541 cctcgatcgc ctcgagggtc ccggcccggt cgcccgtcca catcttctcg accccgacga
     3601 cgagcacggg tcggtcctgg gcgacggctg aatggctccc gaggtggagc gccgtcgtac
     3661 cgccggcgca ggagttgtcc acgttcacga tcgggacgtc gccgagcgat gacttgcgca
     3721 gccagctctg gccccggacg cacccct
//
LOCUS       DATGJT010000244         2785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_137755, whole genome shotgun sequence.
ACCESSION   DATGJT010000244 DATGJT010000000
VERSION     DATGJT010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137755"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            343..2067
                     /gene="argS"
                     /locus_tag="VKX24_04165"
     CDS             343..2067
                     /gene="argS"
                     /locus_tag="VKX24_04165"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007454426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HLJ07706.1"
                     /translation="MSERFAGALAALDESLRGADPVVRRSDRADYQVNGSMALAKRTG
                     RPPRDLAQDIVARVELGDIALPPEIAGPGFINVTLQDAFLARALAETAADPRLGVVPA
                     ATVETVVVDYSAPNVAKEMHVGHLRSTIIGDALVRALEFLGHRVIPQNHLGDWGTPFG
                     MLIEHLLSVGEAEAAQELSVGDLGRFYQEARAEFDANPDFADRARRRVVALQSGDPQT
                     LRLWQLLVDESSRYFGAVYQRLGVRLTPADQAGESRYNPLLSDTVAELDQLGLLVESD
                     GALCVFPPGFTTREGNPLPLIVRKSDGGFGYDTTDLAAIRYRLRDLGGTHLIYVVGAP
                     QREHLEMIFATARLAGWLRPPARAEHVAFGSVLGADRKMFRTRAGGSIRLVDLLDEAV
                     ERAARVVAERSDELGPEEQAAVSEAVGIGAVKYADLSNDRVKDYVFDWDRMLDFNGNT
                     APYLQYAHARVRSVFRKAAQAGVDVSPGGLGPAGEFAPAERRLALEILSFDGAVHDTA
                     AALAPHRLCTYLYDLATAFTDFYETCPILRADGDDQRRSRLFLADLAGRVLARGLDLL
                     GIAAPERM"
     gene            2072..2449
                     /locus_tag="VKX24_04170"
     CDS             2072..2449
                     /locus_tag="VKX24_04170"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ07707.1"
                     /translation="MTRRAALALALSVLGGSWPLLAGCGVGGSSGTVHSVTVTGTEMR
                     FTPTELTLAPGRYRFHFVNGGTVVHSLGIYHDGTPSSAGEAEPGKSVDLGVVTLKDGN
                     YTMQCNEPGHLAAGMRGTIKVTK"
     gene            2511..>2785
                     /locus_tag="VKX24_04175"
     CDS             2511..>2785
                     /locus_tag="VKX24_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07708.1"
                     /translation="MRCPTCGTLDGSWRRPCGRCGHKATLRAFGLLAFADDPTAPPQD
                     RPPRPAEVATPRARLTAAALDVAFAGLALVWSGALGFDQAFALQTSAS"
BASE COUNT          365 a         1071 c          960 g          389 t
ORIGIN      
        1 cggcgccggg gacgccgtcg tccccgtcgt cggcgagttg cgggtcgccg tcgtcgtcgt
       61 ggctttgccc gggcccgacc ctgccttgtc cggcgacggc tcggcggcga agaccggcga
      121 gatcgccagc agcccgacga cgcctgcggc cagcgggaac aggaatcgac ggtgcataac
      181 cgcctcccct caagtcttgt gcaactttcc taacagttgt ccaggataac cacattggaa
      241 acagagatag cgccagtcgg acctttccgg cgcggcgcca tcggtgcgga ggcggccgga
      301 ggcccgcggt acggtcggcg cgtggccgat ccgagcgtcc tcctgagcga gcggttcgcc
      361 ggggcgctgg ccgccctgga cgagtcactg cggggcgccg accccgtcgt ccgccgctcc
      421 gaccgggccg actaccaggt caacggctcc atggcgctgg ccaagcgtac gggccggccg
      481 ccccgcgacc tggcccagga catcgtcgcc cgggtggagc tgggagacat cgcccttccg
      541 cccgagatcg ccggcccggg gttcatcaac gtcaccctcc aggacgcctt cctggcccgg
      601 gccctggccg agacggccgc cgacccccgc ctcggcgtcg tccccgccgc caccgtggag
      661 acggtcgtcg tcgactactc cgcccccaac gtggccaagg agatgcacgt cgggcacctc
      721 cgctcgacga tcatcggcga cgccctggtg cgggcactgg agttcctcgg gcaccgggtc
      781 attccccaga accacctcgg cgactggggg acaccgttcg ggatgctcat cgagcacctg
      841 ctctcggtcg gcgaggccga ggcggcgcag gagctctcgg tcggggacct cggccgcttc
      901 taccaggagg cccgggcgga gttcgacgcc aaccccgact tcgccgaccg ggcccgccgc
      961 cgggtcgtcg ccctccagtc cggcgacccg cagaccctgc ggctgtggca gctgctggtc
     1021 gatgagtcgt cccgctactt cggcgccgtc taccagcgcc tcggcgtgcg gctgacgccc
     1081 gccgaccagg ccggcgagag caggtacaac ccgctcctct ccgacaccgt ggccgagctc
     1141 gaccagctcg ggctgctggt ggagagcgac ggcgccctgt gcgtcttccc gccggggttc
     1201 acgacccggg agggcaaccc gctgccgctc atcgtccgca agagcgacgg cggcttcggc
     1261 tacgacacca ccgacctcgc cgccatccgc taccggctgc gggacctcgg cggcacgcac
     1321 ctcatctacg tcgtcggcgc tccccagcgg gagcacctgg agatgatctt cgccacggcc
     1381 cgcctggcgg gctggctgcg gccgccggcc cgggcggagc acgtggcctt cggcagcgtg
     1441 ctgggcgccg accggaagat gttccggacg agagcgggcg gcagcatccg cctcgtcgac
     1501 ctgctcgacg aagcggtcga acgggccgcc cgggtggtgg ccgagcgcag cgacgagctc
     1561 ggccccgagg agcaggcggc ggtgagcgag gcggtcggga tcggcgccgt gaagtacgcc
     1621 gacctgtcca acgaccgggt caaggactac gtcttcgact gggaccggat gctcgatttc
     1681 aacgggaaca ccgcgcccta cctccagtac gcccacgccc gggtccgctc ggtgttccgc
     1741 aaggcggcgc aggccggcgt cgacgtcagc cccggcggcc tcggtccggc gggcgagttc
     1801 gcaccggcgg aacgacggct ggcgctggag atcctgtcgt tcgacggcgc cgtccacgac
     1861 accgcagcgg cgctcgcccc ccaccggctc tgcacctacc tctacgacct cgccaccgcc
     1921 ttcaccgact tctacgagac ctgcccgatc ctccgggccg acggcgacga ccagcgccgt
     1981 tcccggctct tcctggccga tctcgccggg cgcgtcctgg cccggggcct cgacctgctg
     2041 ggcatcgccg ccccggaacg gatgtagggc ggtgacccgc cgtgccgcgc tggcgctggc
     2101 cctgtctgtc cttggcggct cctggccgct cctggccggc tgcggcgtcg gcgggagcag
     2161 cgggaccgtc cacagcgtca cggtcacggg cacggagatg cgcttcacgc cgacggagct
     2221 gacgctggcc ccgggccgct accggttcca tttcgtcaat ggcggtaccg tcgtccactc
     2281 gctcggcatc tatcacgacg gcactccgag cagcgccggc gaggcggagc cgggcaagtc
     2341 ggtcgacctc ggcgtcgtca cgctcaaaga cgggaactac acgatgcagt gcaacgagcc
     2401 cgggcacctg gccgccggca tgcgggggac gatcaaggtc acgaagtagc gaaccggttt
     2461 cgcgcttcgg ccctttacag gctcggcccc accgacggat cctggccccg atgcggtgcc
     2521 cgacctgtgg gacgttggac ggctcgtggc ggcggccctg cggccgctgc ggccacaagg
     2581 cgacgctgcg ggccttcggg ctgctggcct tcgccgacga cccgacggcg ccgccccagg
     2641 accggccgcc ccgccccgcc gaggtcgcca cgccccgggc ccgcctcacc gccgccgccc
     2701 tcgacgtcgc cttcgccggt ctggccctgg tgtggtcggg ggcgctcggc ttcgaccagg
     2761 ccttcgccct ccagacctcg gcctc
//
LOCUS       DATGJT010000245         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_137851, whole genome shotgun sequence.
ACCESSION   DATGJT010000245 DATGJT010000000
VERSION     DATGJT010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137851"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="VKX24_04180"
     CDS             complement(<1..634)
                     /locus_tag="VKX24_04180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020679073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLJ07709.1"
                     /translation="MRRGMGAHLQPFTTTIFNEMSVLAARTGAINLGQGFPDTDGPAE
                     VAEAAVAAIRAGHNQYPPGAGLPALRRTVADHQRRCYGLEHDPDTEVVITMGATEAIA
                     AAVLGLCDPGDEVVTLEPYYDSYAATIAMAGAVRRVVTLRAPDFALDPDALAAAVGPR
                     TRLVLLNSPHNPTGRVLTADELAAVARVCVERDILAVTDEVYEHLVYDGAR"
     gene            complement(637..1143)
                     /locus_tag="VKX24_04185"
     CDS             complement(637..1143)
                     /locus_tag="VKX24_04185"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HLJ07710.1"
                     /translation="MRQRRALAAAVVIALIAVAGCGGGNGSNGRDTKVTTSPGPTPTG
                     SAPVTLKAALSGIEEVPGPGVKDGIGNFAVDIAGTKGCYTLNATMGEKPTQAHIHQGA
                     KGSSGPVVVDLMPAFAPGESAFAAKSCVDLPGDTAARLIADPSAYYVNVHSDAHPNGA
                     MRGQLARF"
     gene            1243..>2531
                     /locus_tag="VKX24_04190"
     CDS             1243..>2531
                     /locus_tag="VKX24_04190"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HLJ07711.1"
                     /translation="MEVMLLAEVVDVSARVAATPARTAKIAALADLLGRLAPDEVEPA
                     VGFLVGEPRQGRIGVGWASVRRATLDQRDRAAAGEPSITIGEVDRALTELAATTGDGS
                     VAARAALLDGLLARASRAEADFVADLLTGGLRQGALEGVMAEAVAKAAGVPAAAVRRA
                     CMLAGDLGHAAAVALAEGRPGLEAVGLEVLRPVQPMLASTAADVAEAIAGLGLSSVEW
                     KLDGVRLQVHKAGGDVRIYTRNLNDITDRMPEVVEIVRGLSAERVVLDGEALTMSEGA
                     RPQPFQDTMSRVGRRSGEPTATVAPHFFDCLHLDGDDLLDRPLLDRLAALERVAGPWR
                     IPGEVTDDAAAAEAVLHAALAAGHEGVVVKGAHSPYEAGRRGQSWRKVKVARTFDLVV
                     LGAEWGHGRRKGWLSNLHLGARDPRTGEFVMVGKTFKG"
BASE COUNT          312 a          895 c          984 g          340 t
ORIGIN      
        1 ggcgggcgcc gtcgtagacg aggtgctcgt agacctcgtc ggtcacggcc aggatgtcgc
       61 gctcgacgca gacccgggcc acggcggcca gttcgtcggc ggtcaggacc cgcccggtgg
      121 gattgtgcgg cgagttcagc aggaccagcc gcgtccgggg gccgacggcg gcggccaagg
      181 cgtcggggtc gagagcgaaa tccggcgccc ggagggtgac gacccggcgg acagcgccgg
      241 ccatggcgat cgtggcggcg taggagtcgt agtacggctc gagggtgacc acctcgtcgc
      301 ccggatcgca gagcccgagg acggcggcgg cgatggcctc ggtggcgccc atggtgatca
      361 cgacctccgt gtcggggtcg tgctccaggc cgtaacagcg ccgctggtgg tcggccaccg
      421 tccggcgcag cgccggcagc ccggcgccgg gcgggtactg gttgtgcccg gcccggatgg
      481 cggccacggc ggcctcggcc acctcggccg gcccgtcggt gtcgggaaag ccctggccga
      541 ggttgatggc gccggtgcgg gcggcgagca ccgacatctc gttgaagatc gtggtggtga
      601 acggctggag gtgggcgccc atgcctctgc gcatgctcag aaccttgcca gctggccccg
      661 catcgcgccg ttcgggtggg cgtcgctgtg gacgttcacg tagtaggcgg acgggtcggc
      721 gatcagccgg gcggcggtgt cgccgggcag gtccacgcag gacttggcgg cgaaggccga
      781 ctccccgggg gcgaacgccg gcatgaggtc gacgacgacc ggcccgctgg aacccttcgc
      841 cccctggtgg atgtgggcct gcgtcggctt ctcccccatg gtggcgttga gcgtgtagca
      901 gcccttcgtg ccggcgatgt cgacagcgaa gttcccgatg ccgtccttca caccgggacc
      961 gggcacctcc tcgatccccg acagcgccgc cttcagcgtg accggggcgc tgcccgtcgg
     1021 ggtcggcccg gggctggtcg tgaccttggt gtcccgaccg ttggacccgt tcccgccgcc
     1081 acagccggcg acggcgatca gggcgatgac gacggcggcg gccagcgccc ggcgctgtct
     1141 catgggcggt gatcctcgca cgccgccggg tgagccttgg acatttatcg gggactgtcc
     1201 ccgataaatg tccaaacgat cggggcggac gggctgggca gaatggaggt catgctcctg
     1261 gccgaggtcg tcgacgtgtc ggcccgggtg gcggccacgc cggcccgaac ggccaagatc
     1321 gccgccctcg ccgatctgct cgggcggctg gcgcccgacg aggtcgagcc ggctgtcggc
     1381 ttcctcgtcg gcgagccccg ccagggccgc atcggcgtcg gctgggcgtc cgtccgccgg
     1441 gcgactctcg accagcgcga ccgggcggcg gcgggcgagc cgtcgatcac catcggggag
     1501 gtcgaccggg ccctgaccga gctggccgcc accaccggtg acgggtcggt ggcggcccgg
     1561 gccgcgctgc tcgacgggct cctcgcccgg gccagccggg ccgaggccga cttcgtggcg
     1621 gacctcctca ccggcgggct gcgccagggg gcgctggagg gagtcatggc cgaggcggtg
     1681 gccaaggccg ccggggtgcc ggcggcggcc gtccggcggg cctgcatgct ggccggcgac
     1741 ctcggccacg ccgccgccgt cgccctcgcc gagggaaggc ccggcctcga ggccgtcggt
     1801 ctcgaggtgc tccggcccgt ccagccgatg ctggcctcca ctgcggccga cgtggccgag
     1861 gccatcgccg ggctcggcct gtcgtcggtg gagtggaagc tcgacggcgt ccgcctccag
     1921 gtccacaagg ccggcggcga cgtgcggatc tacacccgca acctgaacga catcaccgac
     1981 cggatgcccg aggtcgtgga gatcgtccgg ggtctgtccg ccgagcgcgt cgtgctcgac
     2041 ggcgaggccc tgacgatgag cgagggagcc cgtccgcagc cgttccagga cacgatgagc
     2101 cgggtcggcc ggcgcagtgg cgaaccgacc gccaccgtgg ccccccactt cttcgactgc
     2161 ctccacctcg acggcgacga cctcctcgac cggccgctcc tcgaccgcct cgcggccctc
     2221 gagcgggtgg ccgggccgtg gcggatcccc ggcgaggtga ccgacgacgc cgcggccgcc
     2281 gaggcggtcc tgcacgccgc actggccgcc ggccacgagg gggtggtcgt gaagggggcc
     2341 cactcgccgt acgaggccgg ccggcggggc cagtcgtggc ggaaggtcaa ggtggcccgc
     2401 accttcgacc tcgtcgtcct cggcgcggaa tggggccacg gccggcgcaa gggctggctg
     2461 tcgaacctcc acctcggcgc ccgcgatccc cggaccgggg aattcgtgat ggtggggaag
     2521 acgttcaagg g
//
LOCUS       DATGJT010000246         2804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_656396, whole genome shotgun sequence.
ACCESSION   DATGJT010000246 DATGJT010000000
VERSION     DATGJT010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656396"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VKX24_04195"
     CDS             <1..262
                     /locus_tag="VKX24_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009739818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HLJ07712.1"
                     /translation="VSAICDAVKSTLDRTPPELAADLMEQGVVLTGGGSLLHGLDARL
                     QHETGMPIVVARDPLNCVAIGSGQCLEEFEALKQVLITSSSR"
     gene            281..1120
                     /gene="mreC"
                     /locus_tag="VKX24_04200"
     CDS             281..1120
                     /gene="mreC"
                     /locus_tag="VKX24_04200"
                     /inference="COORDINATES: protein motif:HMM:TIGR00219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HLJ07713.1"
                     /translation="MARPRRSRRTLVVVIVLVLLSVTLITFDERAGTSSITSGIKSVA
                     HDVFSPIITGVNDVLRPIGDFFAGAVHYGALQSENQRLQAMIGQLRLQLGEVQAASKQ
                     DEELRRLAHLPFLPTAKTVTAQMISFNLSNFDADITISKGRDEGVTVGEAVVAAGGLV
                     GKVVEASHGTAEVELITDPASSVGLAYGRSDQQYAEAFGQGAGRALSVDFIPVGTALH
                     RGEAMVTNGLQGAAYPAGIPVGVVRSFHAGVGGASMVVTLNPLANLSELAYVDVIQSL
                     PNL"
     gene            1117..1656
                     /gene="mreD"
                     /locus_tag="VKX24_04205"
     CDS             1117..1656
                     /gene="mreD"
                     /locus_tag="VKX24_04205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HLJ07714.1"
                     /translation="MTSQQFSRGLIVLVVVLLAQLTVVLDLRVDGAHPDIVLGLAIVA
                     GLVGGVERGAVVGFVSGASLDLFLPTPFGLSALVGTVIGAAAGALVTSRIDRSNPLFL
                     PGVAVIGSVIGVIMFAVLGTVLGQPDMVTVSLAPVVGVVALVNGLACYPLRRACAWAL
                     GQSEGRSAWRGPLVSGDAP"
     gene            1653..>2804
                     /locus_tag="VKX24_04210"
     CDS             1653..>2804
                     /locus_tag="VKX24_04210"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07715.1"
                     /translation="MSRRSFLHPFGGGRRFLRPARSPSPPARRPRRRLRMRQRRGVNV
                     GALVAAPQDVPSRPNLRLAVIGLVFLALFATMVLRLWSLQIIGQKNATAAVTSNAVRT
                     VSVPAPRGEILDRGDRILVGNQVEQQIVLSRYEANIDPGIIPAVAALVGQTPTEIRQA
                     LNDSQYSVYQPVPILTGAPLATIQYLDQHQAEFPGVSVQSTTVRSYPQGNGCGCIASH
                     VLGYVGAISSQELKENPGAGYQPTSQVGQSGLEHEYEQSLRGTDGKDQLVVNANNEVV
                     GALHKSAPVEGDTLVTNIDTGLQEAVQGYLQQLILTDQQTKDPTTGLYPAADGGAAIV
                     EDVNTGAILAMSSWPTFSLNDWVGGISNSQYAALTKGCTSSGGCPLDNYA"
BASE COUNT          387 a         1022 c          972 g          423 t
ORIGIN      
        1 ggtctcggcc atctgcgacg cggtcaagtc cactctcgac cgcaccccac cggagctcgc
       61 cgccgacctc atggagcagg gtgtggtgct gaccggcggc ggttcgctgc tgcacggcct
      121 cgacgcccgg ctgcagcacg agaccggcat gccgatcgtc gtcgcccgag acccgctcaa
      181 ctgtgtggcg atcgggagtg gtcagtgcct cgaggagttc gaggccctca agcaggttct
      241 gatcacgtcc tcatctcgct gatccggcgg tcgtcggcgc gtggccaggc cacggcggtc
      301 ccgccgcacg ctcgtcgtcg tgatcgtgct cgtgctgttg tcggtgaccc tcatcacctt
      361 cgacgagagg gccgggacga gcagcatcac ctcggggatc aagtcggtgg cccacgacgt
      421 gttctcgccg atcatcaccg gggtcaacga cgtgctccgt ccgatcgggg acttcttcgc
      481 cggcgccgtc cactacgggg cgctgcagtc cgagaaccaa cggctgcagg ccatgatcgg
      541 ccagctgcga ctgcagctgg gcgaggtgca ggcggcgtcc aagcaggacg aggagctgcg
      601 ccggctggcg cacctgccct tcctgcccac cgccaagacg gtcactgccc agatgatcag
      661 cttcaacctc tccaacttcg acgccgacat cacgatctcg aaggggcgtg acgagggcgt
      721 cacggtgggc gaggccgtgg tggccgccgg cggcctcgtc ggcaaggtgg tcgaggccag
      781 ccacggcacg gccgaggtgg agctgatcac ggacccggcg tcctcggtcg ggctcgccta
      841 cggccggagc gaccagcagt acgcggaggc cttcggccag ggggccggaa gggcgctgtc
      901 ggtggacttc atcccggtcg ggaccgcgct gcaccggggg gaggccatgg tcacgaacgg
      961 gctccagggg gccgcctacc cggcggggat cccggtcggc gtggtccgct cgttccacgc
     1021 cggtgtcggc ggcgcctcga tggtggtcac gctcaacccg ctcgccaacc tctcggagct
     1081 cgcgtacgtc gacgtgatcc agagcctgcc caacctgtga cctcccagca gttctcccga
     1141 ggcctgatcg tcctggtcgt cgtcctgctg gcccagctca ccgtcgtcct cgacctccgg
     1201 gtggacgggg cgcacccgga catcgtcctc ggcctggcga tcgtcgccgg cctggtcggc
     1261 ggggtggagc ggggggcggt ggtcgggttc gtctccgggg cctccctgga cctcttcctc
     1321 ccgaccccct tcgggctctc cgccctggtc gggaccgtga tcggggccgc cgccggcgcg
     1381 ctcgtgacct cgaggatcga ccggtccaac cccctcttct tgccgggggt cgcggtcatc
     1441 ggcagcgtga tcggcgtcat catgttcgcc gtgctcggga cagtcctcgg ccagcccgac
     1501 atggtcaccg tctcgctcgc cccggtggtg ggcgtcgtcg ccctcgtgaa cggcctcgcc
     1561 tgctacccgt tgcggcgagc ctgcgcgtgg gcgctcggcc agagcgaggg ccggtccgcc
     1621 tggcgggggc ccctcgtgtc cggcgacgcg ccgtgagccg gcgctccttc ctgcacccct
     1681 tcggcggcgg ccgccggttc ctgcggcccg cccgttcccc gtcccccccg gcccggcgac
     1741 cacggcggcg cctgcggatg cgccagcgcc gcggggtgaa cgtgggcgcc ctggtcgccg
     1801 cgccccagga cgtgccctcc cgccccaacc tccggctggc cgtgatcggg ctcgtcttcc
     1861 tggcgctgtt cgccacgatg gtcctccgcc tctggagcct gcagatcatc gggcagaaga
     1921 acgcgactgc tgcggtcacg agcaacgcgg tgcggacggt ctcggtgccg gcgccgcggg
     1981 gcgagatcct ggaccgcggc gaccggatcc tcgtcggcaa ccaggtcgag cagcagatcg
     2041 tgctctcgcg ctacgaggcg aacatcgacc cggggatcat cccggcggtc gccgccctcg
     2101 tggggcagac cccgacggag atccgccagg cgctgaacga ctcgcagtac agcgtgtacc
     2161 agccggtccc gatcctcacc ggcgccccac tcgcgaccat ccagtacctc gaccagcacc
     2221 aggccgagtt ccccggggtg agcgtgcagt ccacgaccgt gcgcagctat ccccagggca
     2281 acggctgcgg gtgcatcgcc tcccacgtcc tcggttacgt cggggccatc tcctcccagg
     2341 aactgaagga gaacccgggt gccggctacc agccgacgag ccaggtcggc cagagcgggc
     2401 tcgagcacga gtacgagcag agtctgcggg ggaccgacgg gaaggaccag ctcgtcgtga
     2461 acgccaacaa cgaggtcgtg ggcgcgctgc acaagtcggc cccggtcgag ggggacacgc
     2521 tcgtcaccaa catcgacacc ggcctccagg aggcggtcca gggctacctg cagcagctga
     2581 tcctgaccga ccagcagacg aaggacccga cgaccggcct ctacccggcg gcggacgggg
     2641 gggcggccat cgtcgaggac gtgaacaccg gggccatcct ggccatgtcg tcctggccga
     2701 ccttcagcct gaacgactgg gtgggcggga tctcgaactc ccagtacgcg gccctgacca
     2761 aggggtgcac gtcgagcggc gggtgccccc tcgacaacta tgcg
//
LOCUS       DATGJT010000247         3549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1071150, whole genome shotgun sequence.
ACCESSION   DATGJT010000247 DATGJT010000000
VERSION     DATGJT010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071150"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VKX24_04215"
     CDS             complement(<1..268)
                     /locus_tag="VKX24_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07716.1"
                     /translation="MSIDAWSVASCWALLVGVELAAGDPLWEVDPVPPVPPVPELPFP
                     APEPEPPVPDPEPPVPDPDPDGLGCGLAWPWPEPVGPSPVEPLPE"
     gene            267..1004
                     /locus_tag="VKX24_04220"
     CDS             267..1004
                     /locus_tag="VKX24_04220"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HLJ07717.1"
                     /translation="MAEASVVEAQQSLDDAQLTAPIAGTVASVNLAVGQTVPAGSSTD
                     TIMVVNSGGFQTTSSLTSSQVAQVAVGDTAQVTVDGASGTITGTVSRVGPVNASSSST
                     TYPVVVALNSSAPGAADGATARVTIDVAQATDALVVPTSAVHSTGVNRSYVITLAAGQ
                     ESEKPVVVGVVGSTYTQVMSGITKGTTVVLADYSQAVPASSSNSSRTVGGGGFTGGTF
                     RVGTGGAGGFGGGGGGGGATGKGTISG"
     gene            1140..1490
                     /locus_tag="VKX24_04225"
     CDS             1140..1490
                     /locus_tag="VKX24_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011894125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HLJ07718.1"
                     /translation="MAVYDEIGGPGAVTAAVDLFYDKVLADPSLVGYFDRVDMAGLRE
                     HQRAFITTALGGPPIYDGRDMKTAHQPLGITDADFDAVVGHLGATLTELGVPADTIGT
                     IAGALAPLRADIVA"
     gene            1633..2862
                     /locus_tag="VKX24_04230"
     CDS             1633..2862
                     /locus_tag="VKX24_04230"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HLJ07719.1"
                     /translation="MFQSRSLRMVGALLGTLAFILTACSKKTNTGTGSSPSTSGKPTY
                     TIAYQGPLSGGNQQLGIYMDNAVKLAINQANAGTTFGTLPFTLKFEDEDDQGSADVAP
                     TAATKLIDDNNVVAVIGPAFSGATQASEPDFQQAGLASISPSATLATLTTHGWTNFFR
                     VVANDNIQAAADASYMAKVVKATSVYVVNDASAYGQPLAAAFASDAQTDGMKVTTNTA
                     PGTTQCQAGSGSSTEYPALASEVVSSKAGALFYGGYYCDLALFVKALNAAGYKGTIMS
                     DDGSENTQLITQAGQTAAQGILTSCACATTLGAGAGAAFDTAYMQAYNSAAGTYSAES
                     YDATNAVISVMKGMTGTITRADVVKAIASVDYMGITKEIKFTSTGDIAGQAVYMYKVE
                     GANLTQLGLVSALLPTS"
     gene            2912..>3549
                     /locus_tag="VKX24_04235"
     CDS             2912..>3549
                     /locus_tag="VKX24_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011719918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ07720.1"
                     /translation="MCFTQNFWNLFISGLANGFLYALIALGYTLVYGVLQLINFAHSE
                     VFMSGGFAGLFLMDALIGTGRTPHGAASVVLVILGIVGGAAAGGGVAFVLERVAYRPL
                     RRRRAPKLAFLISAIGASYFLFNLAGKEFGHNAAAVPAPFTNGPMFTVFGSPVQTYYV
                     VLAAAALVMLILLDQLVARTRLGQGIRAVAQDAETASLMGVNIDRVISQTFV"
BASE COUNT          555 a         1282 c         1205 g          507 t
ORIGIN      
        1 gttcgggcag cggctcgacg ggcgacggcc ccaccggttc cggccatggc caggcgagcc
       61 cgcagccgag cccgtcggga tcggggtcgg gcaccggcgg ttcggggtcg ggcaccggcg
      121 gttcgggttc gggggcaggg aagggcagct cgggcaccgg agggaccggg gggaccgggt
      181 cgacctccca cagcgggtcc ccggcggcca gctccacgcc aaccaacagc gcccagcagc
      241 tcgccaccga ccaggcgtcg atcgacatgg ccgaggcgtc ggtcgtcgag gcccagcagt
      301 cgctggatga cgcccagctg accgccccga tcgccgggac cgtggcgtcg gtcaacctgg
      361 cggtggggca gacggttccg gccgggtcgt cgaccgacac gatcatggtc gtcaactccg
      421 gcggcttcca gacaacgtcg tcgctgacca gcagccaggt cgcccaggtt gccgtgggcg
      481 acaccgccca ggtgaccgtc gacggagcct cggggacgat caccgggacg gtcagccggg
      541 tcgggccggt gaacgcctcc tcgagcagca ccacctaccc ggtggtggtc gccctcaact
      601 cgagcgcccc gggtgcggcc gacggggcca ccgcccgggt gaccatcgac gtcgcccagg
      661 ccaccgacgc cctggtggtc ccgacctcgg ccgtccattc gaccggagtc aaccgctcct
      721 acgtgatcac gctcgccgcc ggccaggagt ccgagaagcc ggtggtcgtc ggggtggtcg
      781 gcagcaccta cacccaggtg atgtcgggca tcaccaaggg gacgaccgtg gtgctggccg
      841 actactcgca ggcggtgccg gcgtccagct ccaactcctc ccgcaccgtc ggcggcggcg
      901 gattcaccgg cggcaccttc cgggtcggca ccggcggggc ggggggcttc ggcggaggcg
      961 gaggcggtgg cggggcgacc ggcaagggga ccatctccgg ctgacccgcc gtccgagcac
     1021 accgagcggt ctcggtctcc gaaaggcccg ttcatcggtt ggcaaccgtg cgttgatcgg
     1081 ccggaaacat ggcccgggta caagccttcg cgtgtgtcca gcgacgaagg aggcatgcca
     1141 tggccgtgta cgacgagatc ggcggacccg gggcggtcac cgccgcggtc gacctgttct
     1201 acgacaaggt actcgctgac cccagcctgg tcggctactt cgaccgggtg gacatggccg
     1261 gcctgcgcga gcaccagcgg gcgttcatca ccacggccct cggcggcccg ccgatctacg
     1321 acgggcggga catgaagacc gcccaccagc cgctcgggat caccgacgcc gacttcgatg
     1381 cggtcgtcgg gcacctgggc gccacgctca ccgaactggg cgtgccggcg gacacgatcg
     1441 ggacgatcgc cggtgcgctc gccccgctgc gggcggacat cgtcgcctag tccgccctgc
     1501 cgttgccctc cccgtttccc aatgcgcctg cggagatgta tcttcgcggc ctgtttcgcc
     1561 ggggcggccg tccgatgtcc actggtgcac cgggaggtcg cataggggag ggtcgttcaa
     1621 ggaggtgggc caatgttcca aagccgcagc ctcaggatgg tcggtgccct gctgggcacg
     1681 cttgcgttca tcctgaccgc ctgttccaag aagaccaaca cggggacggg atcgagcccc
     1741 tcgacgtcgg gcaagcccac ctacaccatc gcctaccagg gaccgctgtc cggcgggaac
     1801 cagcagctgg gcatctacat ggacaacgcg gtcaagctgg ccatcaacca ggccaacgcc
     1861 gggacgacct tcgggacgct gccgttcacg ctcaagttcg aggacgagga cgaccagggc
     1921 tcggccgacg tcgccccgac cgcggccacg aaactgatcg atgacaacaa cgtcgtcgcg
     1981 gtgatcggcc cggcgttctc cggcgcgacg caggcttcgg agccggactt ccagcaggcc
     2041 ggcctggcct cgatcagccc gtcggcgacg ctggcgacgc tgaccacgca cggctggacc
     2101 aacttcttcc gggtcgtcgc caacgacaac atccaggccg ccgccgacgc ctcctacatg
     2161 gccaaggtgg tcaaggcgac cagcgtctac gtcgtcaacg acgccagcgc ctacggccag
     2221 ccgctggccg ccgccttcgc cagcgacgcc cagaccgacg ggatgaaggt gacgacgaac
     2281 acggcgccgg ggacgaccca gtgccaggcg ggcagcggga gctcgaccga gtaccccgcc
     2341 ctcgcctccg aggtcgtctc atcgaaggcc ggcgcgctgt tctacggcgg ctactactgc
     2401 gacctggcgc tgttcgtcaa ggcgctgaac gccgccggct acaagggcac gatcatgtcg
     2461 gacgacggtt cggagaacac ccagctgatc acccaggccg gccagaccgc cgcccagggc
     2521 atcctgacca gctgcgcctg cgccacgacg ctcggtgccg gtgccggcgc cgccttcgac
     2581 accgcctaca tgcaggccta caactcggcg gcgggcacct actcggcgga gtcctacgac
     2641 gccaccaacg cggtgatctc ggtgatgaag gggatgacgg gcacgatcac ccgggcggac
     2701 gtcgtcaagg cgatcgcctc ggtcgactac atgggcatca ccaaggagat caagttcacc
     2761 tccaccggcg acatcgccgg ccaggcggtg tacatgtaca aggtcgaggg agcgaacctg
     2821 acccagctcg gtctcgtgag cgccctcctg cccacctcgt aagccaagcg cgacggggcc
     2881 gggcccagac gggcccggcc cccccagccc tatgtgcttc acccagaact tctggaacct
     2941 gttcatctcc gggcttgcca acggcttcct gtacgcgctg atcgctctcg gctacacgct
     3001 ggtctacggg gtcctccagc tcatcaactt cgcccacagc gaggtgttca tgagcggggg
     3061 cttcgccggg ctgttcctga tggacgccct gatcgggacg ggacgcaccc cgcacggcgc
     3121 ggcgtcggtc gtcctggtca tcctcgggat cgtcggcggc gcagcggccg gaggcggcgt
     3181 ggcgttcgtg ctggagcggg tcgcctaccg cccgcttcgc cggcgccggg cgcccaagct
     3241 ggcgttcctg atcagtgcca tcggggcctc ctacttcctg ttcaacctgg ccggcaagga
     3301 gttcggccac aacgccgccg ccgtgcccgc gccgttcacc aacgggccga tgttcacggt
     3361 cttcgggtca ccggtgcaga cctactacgt cgtgctggcc gccgccgccc tggtgatgct
     3421 catcctgctc gaccagctcg tcgcccggac ccggctcggc caggggatcc gggccgtcgc
     3481 ccaggacgcc gagaccgcca gcctgatggg cgtgaacatc gaccgggtga tctcgcagac
     3541 cttcgtcat
//
LOCUS       DATGJT010000248         2210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_864166, whole genome shotgun sequence.
ACCESSION   DATGJT010000248 DATGJT010000000
VERSION     DATGJT010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864166"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..478
                     /locus_tag="VKX24_04240"
     CDS             35..478
                     /locus_tag="VKX24_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3151 family protein"
                     /protein_id="HLJ07721.1"
                     /translation="MSDQPISLTPGGLPETVLPPAPAEARQALEAALALADDAARRDA
                     VAAVVARFPRFLEAWARLGQQARDDVEAYACFRVGYHRGLDALRQAGWRGSGYVRSAR
                     PENLGFLLALDGLRRQAGRIGEADEEARCAEFLHQLDPGWSGGDG"
     gene            complement(475..780)
                     /locus_tag="VKX24_04245"
     CDS             complement(475..780)
                     /locus_tag="VKX24_04245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07722.1"
                     /translation="MPRAAKPTRLPGGGGISMTTEPDFFVKQGDFQALAAGRPMLYYR
                     EPSKALVDWERGWRDFFLGSFPGSVEAIDAAVGWTAEAATGPAGDEPDAGEGEPPAG"
     gene            897..1868
                     /locus_tag="VKX24_04250"
     CDS             897..1868
                     /locus_tag="VKX24_04250"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03560 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HLJ07723.1"
                     /translation="MAIGFGVFAPQGWKRELRGIADPQAAWAKTKEVARAAEAAGYDS
                     IWVYDHFHNVPKPSGEAVFECWTTMAALAEATSRIRLGQMVGCAPYRPPALLAKITSN
                     VDVISGGRLEWGIGAGWYRNEFAGYGYDFGEPKERIGRMAETVEIVTSLWSQPETTYE
                     GRYHRLHRAQCDPKPLQAPRPPVWIGGGGEQLTLRVVARLADWANFGGKPDEWAAKRE
                     VLKGHCKTVGRDEESIGKSWSPEVLIRDSEAEIRALIDAGRAGSLWGEDSGSWAAGNL
                     VGTPEQVAEKVARYVALGCTYFVPWCADYPDLTSLSLLAERVMPEFR"
     gene            complement(1875..>2210)
                     /locus_tag="VKX24_04255"
     CDS             complement(1875..>2210)
                     /locus_tag="VKX24_04255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07724.1"
                     /translation="VPRPRYNAGFPYAEIIRQFDAVAPMVYWLERDPAVEVDQTVSDL
                     AGLGKPIMPVGQAYDAGPEGGPPGSPSKDLVVRFIQAARARGVAGFSFWAWHTATPEE
                     WDAVREARP"
BASE COUNT          287 a          782 c          853 g          288 t
ORIGIN      
        1 tgcgcaggaa cgccggtcgg cgagaatccc ggccatgtcc gatcaaccga tctcgttgac
       61 gcccggcggc ctgccggaga ccgtgctgcc gcccgcgccg gccgaggccc ggcaggcgct
      121 ggaggcggcc ctcgctctgg ccgacgacgc cgcccgccgg gacgccgtcg ccgccgtggt
      181 ggcccgcttt ccccgcttcc tcgaggcctg ggcccggctc ggccagcagg cccgggacga
      241 cgtcgaggcc tacgcctgct tccgggtcgg ctaccaccgg ggcctcgacg ccctgcgcca
      301 ggccggctgg cggggatcgg gctatgtgcg ctcggcccgt cccgagaatc tggggttcct
      361 cttggcgctg gacggcctgc gccgccaggc cggccgcatc ggcgaggccg acgaggaggc
      421 ccgctgcgcc gagttcctcc accagctcga ccccggctgg tcgggcgggg acggctaacc
      481 ggcggggggc tcgccctcgc cggcgtcagg ctcgtcgccg gcggggccgg tggcggcctc
      541 ggccgtccag ccgacggcgg cgtcgatggc ctcgaccgag ccggggaacg agccgaggaa
      601 gaagtcgcgc cagccccgtt cccagtcgac cagggccttg gacggttccc ggtagtagag
      661 catcggccgc ccggcggcca gcgcctggaa gtccccctgc ttcacgaaga agtcgggctc
      721 ggtggtcatc gagatgccgc cgccgcccgg caggcgggtg ggtttggccg cccggggcat
      781 ctaccgcctc ccttcgccgc tgtccacgaa cgccacccta ccgcccgtcc ggcgccggtt
      841 cggccagcca atacggtgtt ccccgccggg atggcggcca cgaggaggac ggcgcaatgg
      901 cgatcgggtt cggtgtcttc gccccccagg gctggaagcg ggagctgcgg gggatcgctg
      961 acccgcaggc cgcctgggcc aagacgaagg aggtggcccg ggccgccgag gcggcgggct
     1021 acgactcgat ctgggtctac gaccatttcc acaacgtgcc gaagccgtcg ggcgaggcgg
     1081 tgttcgagtg ctggaccacg atggccgccc tggccgaggc caccagccgc atccggctgg
     1141 ggcagatggt gggctgcgcg ccgtaccgtc cgccggccct gctggccaag atcacctcca
     1201 acgtcgacgt gatctccggc gggcggctgg agtggggcat cggcgccggc tggtaccgca
     1261 acgagttcgc cggctacggc tacgacttcg gggagccgaa ggagcggatc ggccggatgg
     1321 ccgagacggt cgagatcgtc acgtcgctgt ggtcgcagcc cgagacgacc tacgaggggc
     1381 ggtaccaccg gctgcaccgg gcccagtgcg acccgaagcc cctgcaggcg ccccggccgc
     1441 cggtgtggat cgggggcggc ggcgagcagc tcacgctgcg ggtggtggcc cggctggccg
     1501 actgggccaa cttcggcggc aagcccgacg agtgggcggc caagcgggag gtgctgaagg
     1561 gccactgcaa gaccgtgggc cgcgacgagg agtcgatcgg gaagtcgtgg agccccgagg
     1621 tcctcatccg agacagcgag gccgagatcc gggcgctgat cgacgccggg cgggccgggt
     1681 cgctgtgggg cgaggactcc ggctcctggg cggcgggcaa cctcgtcggc acgccggagc
     1741 aggtggcgga gaaggtggcc cgctacgtgg cgctcggctg cacctacttc gtcccctggt
     1801 gcgccgatta ccccgatctc acctcgctgt cgctcctggc ggaacgggtg atgccggagt
     1861 tccgctgagc ccgctcaggg gcgggcctcg cgcacggcgt cccactcctc gggggtggcg
     1921 gtgtgccagg cccagaacga gaaccccgcc acgccccggg cccgggcggc ctggatgaag
     1981 cggacgacga ggtccttcga aggcgagccg ggcggcccgc cttcggggcc ggcgtcgtac
     2041 gcctggccga ccggcataat cggcttgccg aggccggcga ggtcgctcac cgtctggtcg
     2101 acctccacgg cggggtcgcg ctccagccag tagaccatcg gcgccacggc gtcgaactgg
     2161 cggatgatct cggcgtaggg gaagccggcg ttgtagcggg ggcgggggac
//
LOCUS       DATGJT010000249         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1484585, whole genome shotgun sequence.
ACCESSION   DATGJT010000249 DATGJT010000000
VERSION     DATGJT010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484585"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VKX24_04260"
     CDS             complement(<1..445)
                     /locus_tag="VKX24_04260"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07725.1"
                     /translation="MKDFLPFLVFGVTAGAVYGISAMGLVLTYKTSGLFNFGHGAVSA
                     LAAFLFYTLHVQHGLAWPVAALVSVLGFGVVVGLVLERFAAALSEVAVTYKIVGTIGL
                     LVGIRAVIVLIYGEEARVFAPFLPQTKVFSVQGVSVSVENLITLGL"
     gene            complement(442..942)
                     /locus_tag="VKX24_04265"
     CDS             complement(442..942)
                     /locus_tag="VKX24_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07726.1"
                     /translation="MNLTLVTAAPRGARRAPVLGNDAPWRSGDLLRTGALAGAGLAGL
                     ALTWSGAAGRADWAAELPWVCAGVAATTVAVLGLVTWLVAGLRRVRRLRREILPLVQA
                     AAAVRPAARPAAAAPSADGGFVTAPGMTRFHRPACPLAAGKPVRPLRPGEAAGAGLVP
                     CGVCAA"
     gene            complement(939..1265)
                     /locus_tag="VKX24_04270"
     CDS             complement(939..1265)
                     /locus_tag="VKX24_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019873774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07727.1"
                     /translation="MTTGFSSWLRVQWDRVGAVGAALAGLGALALGWVGVSGTPHIAE
                     QLPYFISGGLVALFFLGLAVALWLSADLRDEWRELRALRLILSESAPETDRADAALVT
                     VAGNGR"
     gene            complement(1265..>2483)
                     /locus_tag="VKX24_04275"
     CDS             complement(1265..>2483)
                     /locus_tag="VKX24_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07728.1"
                     /translation="LAASLPGTVKTTSGIPLPDYPFVAATSAGDDPKEVVAPGVSLRA
                     ESRAQRSASRATVGSDSTGSTSTADAEHDDTGGAQATAVARTDALRVLDRLTLSGVVA
                     EASTSLDAAGVRTSRSSLRIDAIDAAGLVVSVLATTPKGGLPDLPPLVSGQPALPKPP
                     PSEPAPLPAGGTAVRGPVLRFADGRFTVVSGAGGKPAETPVPAAMVADAFRALGIEMT
                     YQAAHPTATGIVAPVLSFRTTLPALPDNPTAFQGPTTVTVDIGRVTTSVAGQSSSRAG
                     IGVDSSAGLPAPAGPAAAPGAAAIGAGPPAADPGAGAFDGAAGATAGVSGPAGGFGPD
                     AAPWPGGSELATAHAPRAGVAPTAPVSVAAPRLARAVGRTVNACTVYVLFLALAGVGL
                     VSGSLVRTVGGKV"
BASE COUNT          364 a          925 c          959 g          235 t
ORIGIN      
        1 cgagcccgag ggtgatcagg ttctcgacgc tgaccgagac gccctggacg ctgaacacct
       61 tcgtctgcgg gaggaacggg gcgaagaccc gggcctcctc gccgtagatg aggacgatga
      121 cggcccggat cccgaccagg aggccgatcg tgccgacgat cttgtaggtg acggccactt
      181 cggagagcgc ggcggcgaac cgttcgagga cgaggccgac gacgacaccg aagccgagga
      241 cggagacgag cgccgccacc ggccaggcca gcccgtgctg gacgtggagg gtgtagaaga
      301 ggaaggcggc cagggccgac accgcgccgt gcccgaagtt gaacagcccg gacgtcttgt
      361 aggtcagcac caggcccatg gccgagatgc cgtagacggc accggcggtg acgccgaaga
      421 cgaggaacgg caggaagtcc ttcatgccgc gcacaccccg cagggcacga gcccggcgcc
      481 ggccgcctcg cccggccgca gcgggcggac gggcttcccg gcggccagcg ggcaggccgg
      541 gcggtggaag cgggtcatgc ccggagcggt gacgaacccg ccgtccgccg acggcgccgc
      601 ggccgccgga cgggcggccg ggcgaaccgc ggccgccgcc tgcaccagcg ggaggatttc
      661 acggcgaaga cgccgcaccc ggcgcagccc ggccaccagc caggtgacga ggccgagcac
      721 ggcgacggtg gtcgccgcca cgccggcgca gacccaggga agctcggcgg cccagtcggc
      781 ccggccggcg gcgccggacc aggtgagggc gagaccggcg aggcccgccc cggccagggc
      841 gcccgtccgc agcaggtcac ccgatcgcca gggagcgtcg ttgccgagca ccggcgcccg
      901 tctcgctccc cgcggcgcgg cggtgaccag cgtgaggttc atcgcccgtt cccggcgacg
      961 gtcaccagcg cggcgtcggc ccggtcggtc tccggcgccg actcggagag gatgagccgc
     1021 agggcccgca gctcccgcca ctcgtcccgc aggtcggcgg acagccacag cgccacggcc
     1081 agcccgagga agaacagggc gaccagcccc ccggagatga agtacggcag ctgctcggcg
     1141 atgtgcggcg taccgctcac cccgacccag ccgagggcca gggcgccgag gccggcgagc
     1201 gccgcgccca ccgctccgac ccggtcccac tggacgcgga gccaactcga gaagcccgtc
     1261 gtcatcagac cttccccccc actgtgcgaa cgagcgaacc ggagaccaga cccacgccgg
     1321 ccagggccag gaacaggaca tagaccgtgc aggcgttgac ggtgcggccc accgcccggg
     1381 cgagcctcgg cgccgccacg gataccggcg ccgtcggtgc cactccggcc cggggtgcgt
     1441 gcgcggtcgc gagctcgctc ccgccgggcc acggtgcggc gtcggggccg aagccgccgg
     1501 cgggaccgga aacgccggcg gtggccccgg cggccccatc gaaggcgccc gccccgggat
     1561 cggccgccgg cgggccggcc ccgatcgccg cagccccggg cgcggcggcc ggcccggccg
     1621 gtgcaggcag accggcgctg gaatcgacgc cgatgccggc ccgggagctg gactgccccg
     1681 ccaccgaggt cgtcacccgg ccgatgtcga ccgtgaccgt cgtcgggccc tggaaggcgg
     1741 tcgggttgtc gggcagggcg ggcagcgtcg tgcggaacga cagcacgggc gccacgatcc
     1801 ccgtcgccgt cggatgggcc gcctggtagg tcatctcgat gcccagcgcc cggaaggcgt
     1861 cggccaccat cgcggccggg accggggtct cggccggctt cccgccggca ccggagacca
     1921 cggtgaagcg accatcggcg aagcgcagca ccggaccgcg cacggccgtc ccgccagccg
     1981 gcaacggcgc cggctccgac ggcggcggct tcggcaacgc cggttgcccc gagacgaggg
     2041 gcggcaggtc gggcagaccg cccttcgggg tcgtcgccag cacggacacg accagcccgg
     2101 cggcgtcgat ggcgtcgatg cgcagcgatg accgggaggt gcggacaccg gccgcgtcga
     2161 gggaggtcga cgcctcggcc accacaccgg agagcgtcag ccggtcgagg acccgcaggg
     2221 cgtcggtgcg ggcgaccgcc gtcgcctgcg cgccgccggt gtcgtcatgc tcggcgtcgg
     2281 ccgtcgacgt cgagccggtg ctgtcggacc cgacggtggc ccggctggcc gaccgttggg
     2341 cgcggctctc ggcccggagg ctgaccccgg gagcgacgac ctccttcggg tcgtcgccgg
     2401 cgctggtggc ggccacgaag ggatagtcgg gcagcgggat gccgctggtg gtcttgaccg
     2461 ttcccggcag cgatgccgcc agg
//
LOCUS       DATGJT010000250         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1279090, whole genome shotgun sequence.
ACCESSION   DATGJT010000250 DATGJT010000000
VERSION     DATGJT010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279090"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..1193)
                     /locus_tag="VKX24_04280"
     CDS             complement(9..1193)
                     /locus_tag="VKX24_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003076961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLJ07729.1"
                     /translation="MPYYRRVGDVSRKRHIRFERPEGGLHSEELMGVEGFSGESALLY
                     HRHPPTAIVKAEAVEEPAPAVEVTANRPLLPRHLRTHALPAGGDAVTGRRLLLGNDDV
                     RLLVAAPAAGAPGELYRNATGDELVYVESGRAVLESVYGRLDVGPGDYVVIPTSTTHR
                     WVPAGDGESFRALVVEARGHIRPPRKYLSPAGQFLEHAPYCERDLRAPEEPLLVDDGE
                     TAVLVRARDGLTRYTYRHHPFDVVGWDGCLYPWAFNIADFEPIVGRLHQPPPVHQTFE
                     GPNFVVCSFVPRLFDFHPEAVPVPYNHANVDSDEVLFYVGGDFMSRKGSGIGLGSISL
                     HPAGFIHGPQPGSVEAAIGKPGTEEVAVMVDTFRPLGLAAAAREVEDPEYAWSWARGL
                     DR"
     gene            1527..>2277
                     /locus_tag="VKX24_04285"
     CDS             1527..>2277
                     /locus_tag="VKX24_04285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07730.1"
                     /translation="MGAGDAAAYGTGTVVHADALRSAGHALVDLDVAFSGSAFSTAAP
                     SHPLVNEVSRVVAPHLAANASHGRGSALELGLGSDPVPLIGQLVETTAPPSTRMIERV
                     LGPIGVPGVLTVDLLRAQSQSRAAAGGCVLGPDQSYGLGSVLNLNVLNGLLSTTAQPP
                     LREVSQSATTTRIVPGSTPGRLGLRSETRQTIAPVTFFRGTPGQFTVEVLGEWALRAT
                     SDGVAGNVSYGPLSASPETPVLRVLGNRGQVL"
BASE COUNT          305 a          873 c          785 g          314 t
ORIGIN      
        1 cccgaggttc accggtcgag gccccgggcc cagctccagg cgtactccgg gtcctccacc
       61 tcccgggcgg cggccgccag ccccagcggc cggaaggtgt cgaccatcac cgccacctcc
      121 tcggtgccgg gcttcccgat agccgcctcg acgctgccgg gctgggggcc gtggatgaac
      181 cccgcggggt ggaggctgat cgaccccagc ccgatccccg accccttgcg ggacatgaag
      241 tcgcccccca cgtagaacag cacctcgtcg gagtcgacgt tggcgtggtt gtaaggcacc
      301 ggcaccgcct cggggtggaa gtcgaacagc cggggcacga acgagcagac cacgaagttc
      361 gggccctcga aggtctggtg gaccggcggc ggctggtgga gccggccgac gatcggctcg
      421 aagtcggcga tgttgaaggc ccaggggtag aggcagccgt cccagccgac cacgtcgaac
      481 gggtggtggc ggtaggtgta gcgggtgagg ccgtcccggg cccggacgag gaccgccgtc
      541 tcgccgtcgt cgacgagcag cggctcctcc ggcgcccgca ggtcccgttc gcagtagggg
      601 gcgtgctcca ggaactgccc ggccggggac aggtacttcc ggggcgggcg gatgtggccc
      661 cgggcctcga ccaccagcgc ccggaacgat tcgccgtcgc ccgccggcac ccagcggtgg
      721 gtcgtcgacg tcgggatcac cacgtagtcg cccgggccga cgtcgagccg gccgtagacc
      781 gactccagca cggcgcggcc cgactcgacg tagacgagct cgtcgccggt ggcgttgcgg
      841 tacagctccc ccggagcgcc ggctgccggt gccgccacca gcaggcggac gtcgtcgttg
      901 cccagcagca gccgccgccc ggtcacggcg tcgccgccgg ccgggagggc atgcgtccgc
      961 agatgccggg gcagcagcgg gcggttggcc gtcacctcca ccgccggcgc cggctcctcg
     1021 accgcctcgg ccttgacgat cgccgtcggc gggtgccggt ggtagagcag cgccgactcg
     1081 cccgagaacc cttccacccc catcagctcc tcgctgtgga ggcccccctc cggtcgttcg
     1141 aaccggatgt gtcgtttccg gctaacgtct ccgacgcggc ggtagtaggg catggcgaaa
     1201 ctctacgttc acggcgccga tcccggcccg acgccgggcc ctgggagcct ccaccgggac
     1261 ggggctctgc cggtttggca tctcctggaa acgggtagga gcggccgggc tcacttcacg
     1321 acagaagtca caccactaac ataggtaaca tcgcgctcta tctggaatca cacctcgggg
     1381 aggggcatcc ggtgaagaga ccgctacgca tcgtcgcgct cgccgtcctg gcgttttccc
     1441 tactgggacc gataccgaac tcgttggccg ggacgccggc cccgcggttg aagaccgccc
     1501 gggaagcgcc tccggccgat ctcggcgtgg gcgcgggcga cgccgccgcc tacgggaccg
     1561 gcaccgtcgt ccacgccgat gccctccggt cggcgggtca cgccctggtc gacctcgacg
     1621 tggcgttctc cgggtcggca ttctccaccg ccgctccgag ccacccgctc gtcaacgagg
     1681 tcagccgggt cgtcgccccg cacctggccg ccaacgcttc ccacggccgg ggctcggccc
     1741 tcgagttggg cctcggctcc gaccccgtcc cgctcatcgg gcagctggtc gagacgacgg
     1801 ccccgccgtc cacccggatg atcgaacgcg tgctcgggcc gatcggcgtg ccgggcgtcc
     1861 tcaccgtcga cctgctccgg gcccagtccc agtcccgggc cgccgccggc ggctgcgtgc
     1921 tcgggccgga ccagtcctac ggcctcggct ccgtcctcaa cctcaacgtc ctgaacgggc
     1981 tcctcagcac caccgcccaa ccgccgctgc gggaggtctc ccagtcggcc acgaccaccc
     2041 ggatcgtccc cggcagcacg cccggccgcc tcgggctccg cagcgagacc cgccagacga
     2101 tcgcccccgt caccttcttc cgcggtacgc cgggccagtt caccgtcgag gtgctgggcg
     2161 agtgggccct gcgggccacc tccgacggcg tggccggcaa cgtgagctac ggcccgctgt
     2221 ccgcttcacc ggagacgccg gtgctgcggg tcctcggcaa ccgcggccag gtgctcg
//
LOCUS       DATGJT010000251         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1279115, whole genome shotgun sequence.
ACCESSION   DATGJT010000251 DATGJT010000000
VERSION     DATGJT010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279115"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1532)
                     /locus_tag="VKX24_04290"
     CDS             complement(<1..1532)
                     /locus_tag="VKX24_04290"
                     /inference="COORDINATES: protein motif:HMM:NF005863.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07731.1"
                     /translation="MPGGQGPAARGNQAAKSRLERNLADIFEVVVDAVPDREALVVGF
                     GDVRLSYAELDRRANRLAQHLADAGIGAGDHVAAYLYNGNEFVETMLAAFKLRAAVVN
                     VNYRYVAAELDYLLRDSDARAIVYDARFTPTLAEVTDAAEPPPLLGLRLAVGPGPTVP
                     ASTPYEEALAGASPVRPEVRRSGDDRYLLYTGGTTGMPKGVLWRHADILAAGLGNLDG
                     VATAEEEAERARQGRDRHLPACPLMHGAAQWVTLATFFGGGTVILSPDTRLDPGRLAE
                     LIAAERATIVTIIGDAVGRPLADAVHARPDLDLRAVRVILNSGATVSPRVKDDLMTRL
                     PGAFIYDTFGSSESGTFAKSTSGTGNTPAQGRFAPREDAVVLDDELRPVTPGSGVVGR
                     LARSGPVALGYYNDPEKTAATFPVIDGVRYIITGDHATVEADGTVQILGRGSASINTG
                     GEKVYPDEVEAALKSHADVADAMVVGLPDERFGERVVALVVSRTGGVPPDLDEHVRRH
                     VAG"
     gene            complement(1579..>2163)
                     /locus_tag="VKX24_04295"
     CDS             complement(1579..>2163)
                     /locus_tag="VKX24_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007673506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLJ07732.1"
                     /translation="LKEMRAHAGDKAWQRQLFDDCSRMMMALTEAPQPVIARVHGIAT
                     AAGCQLVAACDLAVAAEGTWFATPGVKIGLFCSTPMVEVSRAVGRKRAMEMLLTGTPI
                     DTATAADWGLVNRVVPPEGLEDAVAELAGKIAASSPLVIGLGKQAFYRQIDLDKRQAY
                     DLTKAVMTMNAMTGDAQEGICAFLEKRPPSWKGE"
BASE COUNT          265 a          747 c          849 g          302 t
ORIGIN      
        1 ccggcgacgt ggcggcggac gtgctcgtcg aggtcgggcg ggaccccgcc cgtccggctg
       61 acgacgaggg ccaccacccg ctcgccgaag cgctcgtcgg ggaggccgac gaccatggcg
      121 tcggcgacgt cggcatgcga cttgagcgcc gcctccacct cgtcggggta gaccttctcg
      181 cccccggtgt tgatggaggc cgagccccgg ccgaggatct ggacggtgcc gtcggcctcg
      241 accgtggcgt ggtcgccggt gatgatgtag cggacgccgt cgatgaccgg gaacgtggcg
      301 gcggtcttct ccgggtcgtt gtagtagccg agggcgacgg ggccggagcg ggccagccgg
      361 ccgacgacgc cggagcccgg cgtcaccggg cggagctcgt cgtcgaggac gacggcgtcc
      421 tcccgggggg cgaagcggcc ctgggccggc gtgttgccgg tgccgctggt cgacttggcg
      481 aacgtgcccg actccgatga tccgaacgtg tcgtagatga aggcgccggg caggcgggtc
      541 atgaggtcgt ccttgacccg gggcgagacg gtggcgccgc tgttgaggat cacccgcacg
      601 gcgcggaggt cgaggtcggg ccgggcgtgg acggcgtcgg ccagcggccg gccgacggcg
      661 tcgccgatga tcgtcacgat cgtggcccgc tcggcggcga tcagctcggc caggcggccg
      721 gggtcgaggc gggtgtcggg cgagaggatc accgtgccgc cgccgaagaa cgtggccagc
      781 gtcacccatt gggcggcgcc gtgcatcagc gggcaggcgg ggaggtggcg gtcccggccc
      841 tggcgggccc gctcggcctc ctcctccgca gtggcgacgc cgtcgaggtt gccgaggccg
      901 gcggcgagga tgtcggcgtg acgccacagc acgcccttcg gcatcccggt ggtgccgccg
      961 gtgtagagca gatagcggtc gtcgccgctg cgccggacct cggggcggac gggcgacgcc
     1021 ccggccagcg cctcctcgta gggcgtcgag gcgggcacgg tcgggccggg gccgacggcc
     1081 aggcgcagcc cgaggagcgg cggaggctcg gcggcgtcgg tgacctcggc cagggtcggc
     1141 gtgaaccggg cgtcgtagac gatcgccctg gcgtcggagt cccgcaggag gtagtcgagc
     1201 tcggcggcga cgtagcggta gttgacgttg accaccgccg cccggagctt gaaggcggcc
     1261 agcatggtct cgacgaactc gttgccgttg tagaggtagg cggcgacgtg gtcgccggcc
     1321 ccgatgccgg cgtcggccag gtgctgcgcc agccggttgg cccgccggtc gagctcggcg
     1381 tagctcagcc ggacgtcgcc gaacccgacg acgagcgcct cccggtcggg gacggcgtcg
     1441 accacgacct cgaagatgtc ggccaggttg cgctccaggc ggctcttcgc cgcctggttg
     1501 cccctggcgg cgggcccctg ccctccgggc atcccgccgc gctgccgtgg ggccccgacc
     1561 ccacggcgac ctggcgcgct actcaccctt ccaactgggg gggcgcttct ccaggaaggc
     1621 gcagatgccc tcctgggcgt cgccggtcat ggcgttcatc gtcatgacgg ccttggtcag
     1681 gtcgtaggcc tggcgcttgt cgagatcgat ctggcggtag aaggcctgct tgccgaggcc
     1741 gatcaccagc gggctggagg cggcgatctt gccggccagc tcggccacgg cgtcctccag
     1801 cccctcgggc gggacgaccc ggttgacgag gccccagtcg gcggcggtgg cggtgtcgat
     1861 cggtgtgccg gtcagcagca tctccatcgc ccgcttccgg cccacggccc gggagacctc
     1921 gaccatcggg gtggagcaga acagcccgat cttcacgccg ggggtggcga accacgtgcc
     1981 ttcggcggcc acggccaggt cgcaggccgc caccagctgg cagccggccg ccgtcgcgat
     2041 cccgtggacg cgggcgatga ccggctgcgg cgcctcggtc agcgccatca tcatccggct
     2101 gcaatcgtcg aagagctgac gctgccacgc cttgtcgccg gcgtgcgcgc gcatctcctt
     2161 gag
//
LOCUS       DATGJT010000252         3105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1279206, whole genome shotgun sequence.
ACCESSION   DATGJT010000252 DATGJT010000000
VERSION     DATGJT010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279206"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            396..737
                     /gene="trxA"
                     /locus_tag="VKX24_04300"
     CDS             396..737
                     /gene="trxA"
                     /locus_tag="VKX24_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012870635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HLJ07733.1"
                     /translation="MAKPTEITDDNFEVEVASSDAPVLVDFWAEWCHPCHMIAPEVEA
                     IAESEAGRLKVGKLNVDDSPATAGRFGVFSIPTLLLFVDGEEKARMVGVRRREAILEQ
                     IRPHLSTSATA"
     gene            1002..2501
                     /locus_tag="VKX24_04305"
     CDS             1002..2501
                     /locus_tag="VKX24_04305"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase"
                     /protein_id="HLJ07734.1"
                     /translation="MLLHFWTFACINCQHALQSLATIERELEGEPLLIISVHSPKFPA
                     QREVELATEAVRQLEVTHPVVLDPDSRITHSFAVSGWPTMVFVGPAGTILGTLRGEPE
                     PQGLLNVVRQVLAAGKADGSLTGGPLPLKPDRAPPHRLAFPEAVLCAEVAGEPRVIVA
                     DSGHHQVVICDTAGAELLRIGTGAPGLADGPAAEAELRRPCGLAVVHQPEGDILYIAD
                     TGNHALRAVDLQANLVTTLAGGPGQSTAPPLRSPWGLAWSGSRLYLAAAGSHQLWAFD
                     PATSHLAVIAGTGAEGGKDGPATEAYFAQPSGLAFSGGPVGHSGHGGHGGHRALYVVD
                     AETSSIRAIDGLDDPGRARLGGAGTRTVCGAGDLFGFGDRDGAGPGAELQHPIGLTGG
                     PDGTLWVADTFNHKIKRVDPSTGSCRTAFGNGDSLLDEASPAGTVLGPAGPDRPLFCV
                     PEGVAAGPDGRSLLVADTGNHRIVSVPLDQGGGPATVLIGGPAGQRDRR"
     gene            complement(2483..>3105)
                     /locus_tag="VKX24_04310"
     CDS             complement(2483..>3105)
                     /locus_tag="VKX24_04310"
                     /inference="COORDINATES: protein motif:HMM:NF017200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HLJ07735.1"
                     /translation="GSADGLNMILTGQGALVTGLIAGTPAASALHTGDVIVGVDGAPV
                     STEFDLMDAVSAKPAGTSFSLSVDRGGRTVALRAASSKVGGQVVLGADLLTKDLAVTR
                     PFQVSFTKLDIGGPSAGLAYALTISAALGNLDLNGSTVAATGTMDRSGNVGDVGDVDQ
                     KAVGASAAGVRLFITPADEASQATGLIATVKGVTTLQQALTYLRSR"
BASE COUNT          465 a         1172 c         1054 g          414 t
ORIGIN      
        1 gccgaggtgt cgggcgacga tccaccgccg cccgcggtga tccggccaat gagaaacgcg
       61 aacacgacaa cgccggccag gattgccacc cggccccaaa ggacccgcgg tccttgcccg
      121 aaagggtcct cgcgatcgta cgaaggctct atctcgaacg gttccaaccg gtccgccgca
      181 tggggggtcc cttccgcgct tccatgaccc ggaagagcct atctggaatg tgggaaaaat
      241 tcacgggggc aagtttgggc tggtccatcc ggcccggcac ctaccgctcg atacccgcgc
      301 ccagggggaa taatgcctgc aggagcgagg ttctagaccg gtgcagagtg ccacaaccga
      361 gaggaggagg gccctacggg ggcccgacac acgagatggc gaagcccacc gagatcaccg
      421 acgacaactt cgaggtcgag gtcgcaagtt cggacgcccc ggtcctcgtt gacttctggg
      481 ccgagtggtg ccacccctgc cacatgatcg ctccggaggt cgaggcgatc gccgagtccg
      541 aggctggccg actcaaggtt ggaaagctca acgtcgacga cagcccggcc acggccggcc
      601 ggttcggcgt gttctcgatc ccgaccctgc tgcttttcgt cgacggcgag gagaaggctc
      661 ggatggtcgg tgtacgccgc cgggaagcga tcctggagca gatccggccg cacctgagca
      721 cctcagcgac tgcctaaatc tgcccggaag ggcaacgaag gaccgatgac gccggacggg
      781 ctcctgtccg gcgccttcgc gtcgacctca cgggtcggcc gaccgcgtgg ccaaatgggc
      841 gcccggctga cccacggggt gggtcccagc cgccagtcgt aagcaagcgc cgagcaccag
      901 gagacccgac catcgccatc cacgcccccg ccctgcccgc cgacgccgtt tggctcaacg
      961 tcgagcgccc gctgacgccg gccgacctgg ccggccggct ggtgctcctc cacttctgga
     1021 ccttcgcctg catcaactgc cagcacgcgc tgcagtcgct ggcgaccatc gaacgcgagc
     1081 tggagggcga gccgctcctg atcatcagcg tccactcgcc gaagttcccc gcccagcggg
     1141 aagtcgagct ggccaccgag gccgtacgcc aactcgaggt cacccacccg gtggtgctcg
     1201 atcccgactc ccggatcacc cacagcttcg cagtcagcgg gtggccgacg atggtcttcg
     1261 tcggccccgc cggaacgatc ctcggcaccc ttcggggtga accggagccc cagggcctgc
     1321 tgaatgtcgt tcgccaggtc ctggccgccg ggaaggccga cggcagcctg accggcggcc
     1381 cgctgccctt gaagcccgac cgggccccgc cccatcgcct ggccttcccc gaggccgtgc
     1441 tgtgcgccga agtcgccggt gagccgcggg tcatcgtggc ggactcgggc caccaccagg
     1501 tcgtcatctg cgacaccgcc ggggccgagc tgctcaggat cggcaccggg gcccccggcc
     1561 tcgccgacgg tccggcggcc gaggcggagc tccggcgacc gtgcgggctc gccgtcgtgc
     1621 accaacccga gggcgacatc ctctatatcg ccgacaccgg caaccacgcc ctccgggcgg
     1681 tcgacctgca ggccaacctc gtcacgacgc tcgccggcgg ccccgggcag tcaaccgcgc
     1741 cgcccctgcg ctcgccctgg ggcctcgcct ggagcgggag ccgcctgtac ctcgccgcgg
     1801 cggggtccca ccagctgtgg gccttcgacc cggcgaccag ccacctcgcg gtcatcgccg
     1861 gcaccggtgc cgaggggggc aaggatgggc cggcaaccga ggcctacttc gcccagccaa
     1921 gcgggcttgc cttcagcggc ggccccgtcg ggcacagcgg ccacggcggg cacggcgggc
     1981 accgcgctct ctacgtggtc gacgccgaga cctcgagcat ccgggcgatc gacggcctgg
     2041 acgaccccgg ccgggcccgg ctcgggggcg ccggcacccg caccgtctgc ggcgccggcg
     2101 acctcttcgg cttcggcgac cgcgacggcg ccggaccggg cgccgagctg cagcacccga
     2161 tcgggctcac cggcggcccg gacgggaccc tgtgggtggc cgacaccttc aaccacaaga
     2221 tcaagcgggt cgatccgtcg acgggcagct gccgcaccgc cttcggcaat ggcgactcgc
     2281 ttctcgacga ggcctcaccg gcgggcacgg tcctggggcc ggccggcccc gaccgcccgc
     2341 tgttctgcgt gccggagggc gtcgccgccg ggcctgacgg ccggagcctc ctcgtcgccg
     2401 acaccggcaa ccatcgcatc gtgtcggtac cgctcgacca gggcggcggc ccggcgacgg
     2461 tgctgatcgg tggccccgcc ggtcagcgcg accgcaggta ggtcagcgcc tgctggaggg
     2521 tggtgacgcc cttcacggtg gcgatgaggc cggtcgcctg cgacgcctcg tcggcggggg
     2581 tgataaacag ccggactcct gcggcgctgg cgcccaccgc cttctggtcg acatccccca
     2641 cgtcgcccac gttgccggac cgatccatcg tgccggtcgc ggccaccgtc gacccgttca
     2701 gatcgaggtt gcccagggcc gcggagatcg tcagggcgta ggccagcccc gccgacggac
     2761 cgccgatgtc gagcttggtg aagctgacct ggaagggtct ggtgaccgcc aggtccttcg
     2821 tcagcaggtc ggcgccgagg acgacctggc cgcccacctt cgagctggcg gcccgcagcg
     2881 ccaccgtccg gccgccccga tcgaccgaca gcgagaacga ggtccctgcc ggcttggccg
     2941 acaccgcgtc catcaggtcg aactcggtac tgaccggggc tccatcgacc ccgacgatca
     3001 cgtcgccggt gtgcagcgcc gaggccgccg gcgtcccggc gatcaggccg gtgaccagcg
     3061 caccctgacc ggtcaggatc atgttcaacc cgtcggcgct cccgg
//
LOCUS       DATGJT010000253         4181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_967105, whole genome shotgun sequence.
ACCESSION   DATGJT010000253 DATGJT010000000
VERSION     DATGJT010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967105"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="VKX24_04315"
     CDS             complement(<1..230)
                     /locus_tag="VKX24_04315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07736.1"
                     /translation="MLLLPEMWACPFDTDSTEGFPACIVQLFPSDAVPHPPTMLRPTK
                     LSVASGVPEAVGMPPGFWLGDGDGLGLGDGLG"
     gene            229..1596
                     /locus_tag="VKX24_04320"
     CDS             229..1596
                     /locus_tag="VKX24_04320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07737.1"
                     /translation="MALLDATLGSQVAGDAEAVARYTSQAYSYDDGSLALRFTAPGSY
                     YTAGLDSPNNQAVIDIIRNGGTGESVLASIPYHAIDGTSYWERVRVQNVGSSATISVR
                     VWPDGTPEPTSWNLTYTDGSPLPAGLVGIEAWDDGQGWTMDNFSAASLAPTPPPPSPS
                     PSPSPSPSPSPSPSPSPSPSASPSPSPSPSPSPSPSAPSVPTASGSLMGQDSFAGRSV
                     AGGWGTSSDGNVWSVVGGNGALMSVSGNEGRVTGSSTMALLDAVLGTQTAGDSEAVAR
                     YTSQDYRNDNGHLLLRFSGTSTYYVAGLDSPQGSPVIDIMRNGGNGESEVASVPYPAV
                     DGTSYWERLRVQNSGSAAVISVRVWPDGTPEPTTWNLTYTDSSPLPAGRAGIQAWDDG
                     LGWTMDGFSAGDLGNGSVVSALRRIPGVDIALMVLGWLVAMAYVLLPKAGLRRDETGG
                     PAPGG"
     gene            1706..2779
                     /locus_tag="VKX24_04325"
     CDS             1706..2779
                     /locus_tag="VKX24_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07738.1"
                     /translation="MAPVLAAALLGVTAFPSGAASAAGGAPAPASSPAGDLLPGTIPL
                     PAITLPPPLPTIQLPPLTLPPIPGLIGGSAPGGSAPAPSGIGAYQGLAGWIDLYDYGA
                     AGEPSPAAYVSEMAARGVKTIYVETARWNSTSDFDFATAVGQLIDAAHGQGLKVVGWY
                     LPGFGDQATDLRRSLAVLTYTSPGGGHFDGFAADIEDHGDTASTGQFNAGIVAYAQAL
                     RAAVPAGTILGAIVPDAKNNERAPAHWAGFPWPQIAANFDVILPMAYWSVTKNPSTCL
                     GTQLDVTAYMDQVIDTTDSLMGQSKPMAPMGGIADCDTTREVSEYVGVLQAKGAIGGG
                     LYDFPTLQARPDASTLWSELAGV"
     gene            2891..3745
                     /locus_tag="VKX24_04330"
     CDS             2891..3745
                     /locus_tag="VKX24_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018088855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ07739.1"
                     /translation="MAEQEWLAERFEENRAHLRSVAYRMLGSAAEADDAVQEAWLRLS
                     RTDTSEVTNLGGWLTTVVARVSLDMLRSRESRREEPVGQELPDIPGGTDPEREALLAD
                     AVGPALLVVLETLGPAERLAFVLHDLFAVPFEEIAPIVGRSPAAARQLASRARRRVQG
                     APAVEAGHARQRAVVDAFLTAARSGDFEALLEVLDPDVVVRFDPKATMPGSPPEVRGA
                     AAVAATFSGAAQTAEPATIDGVPGLVWAPGGRPRAAFLFTVVDGRITELRTVAGKRIG
                     ELDIELAD"
     gene            complement(3742..>4181)
                     /locus_tag="VKX24_04335"
     CDS             complement(3742..>4181)
                     /locus_tag="VKX24_04335"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HLJ07740.1"
                     /translation="WPDLTELTYQETVTDEAMPAGTFFDLATVHLLTTATINQLRELC
                     PSSRFEPRRFRPNLVIRPEDDDIGFVEGKWVGQRLAIGDEVVLTITDHCPRCVMTTLA
                     QGDLPQDRDVLRTAARHNAVHVGVYAEVSRPGPIRRGDRVLLC"
BASE COUNT          594 a         1542 c         1458 g          587 t
ORIGIN      
        1 tcgcccagcc cgtcgcccag ccccagcccg tcgccgtcgc cgagccagaa cccgggcggc
       61 atcccgacgg cctcgggcac accgctggcc accgacagct tcgtcggccg caacatcgtt
      121 ggcggatggg gtacggcgtc ggacgggaac agctggacga tgcaggcagg gaacccctcg
      181 gtgctgtcgg tgtcgaacgg gcaggcccac atctccggca gcaggagcat ggcgttgctc
      241 gacgccacgc tgggcagcca ggtcgcgggt gacgccgagg ccgttgcccg ctacacgtcg
      301 caggcctaca gctacgacga cggcagcctg gcgctgcgtt tcaccgcccc tggcagctac
      361 tacaccgccg gcctcgactc acccaacaac caggcagtga tcgacatcat tcgcaacggc
      421 ggcacgggcg agtccgtgct ggcgagcatc ccctaccatg ccatcgacgg gacttcttat
      481 tgggagcggg tgcgggtcca gaacgtcggc tcctcggcaa cgatctcggt ccgcgtgtgg
      541 ccggacggga cgcccgagcc aaccagctgg aacctgacct acaccgatgg ctcgccgctg
      601 ccggcggggt tggtcggcat cgaggcctgg gacgacggcc agggctggac gatggacaac
      661 ttctcggccg cctcgctggc gcccaccccg ccgccgccga gcccgagtcc ctccccgtcg
      721 cccagcccga gccccagccc gtcgcccagc ccaagcccct cgccgtcagc cagcccgtcg
      781 cccagcccga gcccctcgcc gtcacccagc ccgagcgccc cgtccgtccc gaccgcatcg
      841 gggtcactga tgggtcagga cagcttcgcc gggcgcagcg tggccggcgg gtggggcacc
      901 tcctcggacg gaaacgtctg gtcggtcgtc ggcggcaacg gtgccctgat gtcggtctcg
      961 ggcaacgagg gccgcgtcac cggcagctcc acaatggcgc tgctcgacgc cgtcctcggc
     1021 acccagaccg ccggcgacag cgaggccgtg gcccggtaca cctcgcagga ctaccgaaac
     1081 gacaacgggc acctgctgct gcgcttcagc gggacgagca cctactacgt cgccggcctc
     1141 gactcgcctc aggggtcccc ggtgatcgac atcatgcgca acggtggcaa cggcgagtcg
     1201 gaagtggcca gcgtgcccta cccggcggtc gatggcacct cctactggga gcggctccgg
     1261 gtccagaact ccggctcggc ggccgtgatc tcggtccggg tgtggccgga cgggacgccc
     1321 gagccaacca catggaacct gacctatacc gactcctcgc ccctgcccgc cggccgggct
     1381 ggcatccaag catgggacga cgggctcggc tggacgatgg acggcttctc cgccggcgac
     1441 ttgggcaacg ggtcggtggt gtcggcgctg cgcaggatcc ccggcgtcga catcgctctg
     1501 atggtgctcg gttggctggt cgccatggcc tacgtgctgc tgccgaaggc cggcctccgc
     1561 cgggacgaga ccggagggcc agccccggga ggctgattgg gctttacagc ttggggttaa
     1621 ctacgccatc cttccacctg gaggaggacg agggatggca ccaagttccg caggaagatc
     1681 ccgcgggtac gggctcctgg cccgggtggc ccccgtcctc gcggcggcgc tcctgggagt
     1741 cacggcgttc ccgtccggag ccgcttcggc agccggcggc gcaccggccc cggcatcgag
     1801 ccccgcgggt gatcttctgc ccgggaccat cccgctgccc gcgatcacgc tcccgccgcc
     1861 actgccgacg atccagctcc cgccgctgac cctcccgccg atccccgggc tgatcggcgg
     1921 atcggccccg ggggggagcg caccggcccc ctccgggatc ggcgcctacc agggactggc
     1981 gggatggatc gacctgtatg actacggtgc cgccggcgag ccgtcccccg cggcctacgt
     2041 gagcgagatg gccgcccgcg gggtgaagac gatctacgtc gagaccgccc ggtggaattc
     2101 gaccagcgac ttcgacttcg ccaccgcggt cggccagctg atcgacgccg cccatggcca
     2161 gggcctcaag gtcgtcggtt ggtacctgcc cggattcggc gaccaggcaa cggacctgcg
     2221 gcgcagcctg gccgtcctga cctacacctc gccgggcggg ggccatttcg acggcttcgc
     2281 cgcggacatc gaggaccacg gcgacacggc cagcaccggt cagttcaatg ccgggatcgt
     2341 cgcctatgcc caggcgctcc gggcggcggt gccggccggg acgatcctgg gggcgatcgt
     2401 gcccgacgcc aagaacaacg agcgggcgcc ggcgcactgg gcggggttcc cgtggccgca
     2461 gatcgccgcc aatttcgacg tcatcctccc gatggcctac tggtcggtga ccaagaaccc
     2521 gtcgacctgc ctcggcaccc agctggacgt caccgcctac atggaccagg tcatcgacac
     2581 caccgactcg ctgatgggcc agtccaagcc catggccccg atgggcggca tcgccgactg
     2641 cgacaccacc agggaggtca gcgagtacgt cggcgtgctg caggccaagg gggcgatcgg
     2701 cggcggcctg tacgacttcc cgacgctgca ggcacgtccg gacgccagca ccctgtggtc
     2761 ggaactcgcc ggggtctgac cctgttccgg gtagctctcc caccgatcag ggtcagtggc
     2821 gtcgcaacct ccgccgggtc ccaggtcaca aagcatccgc ccgatccgtc atcctgacgg
     2881 aggtgcgccc atggctgaac aggagtggct tgccgagcgg ttcgaggaga accgcgccca
     2941 tctgcgctcc gtcgcctacc ggatgctcgg ctcggcggcg gaggccgacg acgccgtcca
     3001 ggaggcgtgg ttgcggctca gccgcacaga caccagcgag gtcacgaacc tcgggggctg
     3061 gttgacgacg gtggtcgccc gggtgtcgct cgacatgctg cgctcccgcg agtcccggcg
     3121 cgaggaaccg gtcggccagg agctccccga catccccggc ggcacggacc ccgaacggga
     3181 ggcgctcctc gccgacgcgg tcggcccggc gctcctggtg gtgctcgaga ctctcggtcc
     3241 ggcggagcgg ctggcgttcg tcctccacga cctgttcgcc gtgccgttcg aagagatcgc
     3301 ccccatcgtc ggtcgctccc cggcagccgc ccgccagctc gccagccggg cgcggcgccg
     3361 ggtgcagggg gcgccggcgg tcgaggccgg ccacgcccgg cagcgggccg tcgtcgacgc
     3421 cttcctcacc gccgcccggt cgggcgactt cgaggcgctc ctcgaggtgc tcgatcccga
     3481 tgtggtcgtc cgcttcgacc cgaaggccac gatgcccggc tcccccccgg aggtccgcgg
     3541 cgcggcggcg gtggcggcca cgttctccgg cgcggcccag accgccgagc cggcgacgat
     3601 cgatggcgtg ccgggattgg tgtgggcccc cggggggcgg ccgcgggcgg ccttcctgtt
     3661 caccgtcgtc gacggccgga tcaccgagct ccggaccgtg gccgggaagc ggatcggcga
     3721 gctggacatc gaactcgccg actagcagag caggacccgg tcgccccgcc ggatcggccc
     3781 gggccggctg acctcggcgt agacccctac gtggacggcg ttgtggcggg ccgccgtccg
     3841 caggacgtcc cggtcctggg gcaggtcgcc ctgggccagc gtggtcatca cgcagcgcgg
     3901 gcagtgatcg gtgatggtga ggaccacctc atcgccgatc gccaggcgct gcccgaccca
     3961 cttgccttcg acgaaaccga tgtcgtcgtc ctcgggccgg atcaccaggt tgggccggaa
     4021 ccggcggggc tcgaaccgtg acgacgggca gagttcacgc agctggttga tcgtcgcggt
     4081 cgtgagcagg tgtaccgtcg ccaggtcgaa gaaggtgccc gccggcatcg cctcgtcggt
     4141 gaccgtctcc tggtaggtga gctcggtgag gtcgggccag t
//
LOCUS       DATGJT010000254         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1484992, whole genome shotgun sequence.
ACCESSION   DATGJT010000254 DATGJT010000000
VERSION     DATGJT010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484992"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..925)
                     /locus_tag="VKX24_04340"
     CDS             complement(<1..925)
                     /locus_tag="VKX24_04340"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HLJ07741.1"
                     /translation="MTLDPTSAISLLYRRLGFGASPAELAAGVSAGYGATVDLLLSGL
                     GQPDPGGDAVPVPAFTPISLGALRSTDPATRQSYIDAIRTEDRDLVAWWVARMVATTN
                     PAQEKLTFLLHGHFPTALSKVHFAPFMYRQNQLFRTLGPGDFQALTQAVAVDPAMLIW
                     LDASSDKAANPNENFARELLERFTMGIGTYTEADVRAAAYAFTGWQLDLRTGGFSISA
                     LDHSNVPQRFLGHGGITSGTQVIEIATTTTASSHYVPAAFWSHLASPVTPKSAVAADL
                     APGYSAGRNLADLLRAIVTHPDFLTPSTQSGL"
     gene            complement(1063..1260)
                     /locus_tag="VKX24_04345"
     CDS             complement(1063..1260)
                     /locus_tag="VKX24_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07742.1"
                     /translation="MFTTTEQVSASNLAVGVCATALGPANDIGAITANTISIRPAPKS
                     GCTAAGGFGGFGGFFAGRGAA"
     gene            complement(1345..1977)
                     /locus_tag="VKX24_04350"
     CDS             complement(1345..1977)
                     /locus_tag="VKX24_04350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07743.1"
                     /translation="MRTRRSWRAAPLPLAVGLATLATVAATAGVAFAATTTTTTTPRP
                     SFSTASGTVAALSTATSSMEVQSPSSGQVTVSWTTTTRFSETVTIAATKLVVGDCVTV
                     VSASKNKTGPIAATTVSLRPSTNGSCSGAGGFGLAGAPPTGSGGFGGGSGARGFVGTA
                     PGGSFPRRSGASRFGTGALGRFASGKVIEKSKSTFVVKGFAPGARPAAST"
BASE COUNT          303 a          697 c          800 g          292 t
ORIGIN      
        1 tgagcccgct ctgggtcgaa ggggtcagga agtcgggatg ggtgacgatg gctcgcagca
       61 ggtcggcgag gtttcgaccg gccgagtagc cgggggcgag gtccgccgcc accgcgctct
      121 tgggggtcac cgggctcgcc aggtggctcc agaacgcggc gggcacgtaa tgcgaggacg
      181 ccgtggtggt ggtggcgatc tcgatcacct gggtgcccga ggtgatgccg ccgtgtccga
      241 ggaaccgctg gggcacgttg gagtggtcga gggccgagat cgagaagccg cccgtgcgca
      301 ggtcgagctg ccacccggtg aaggcgtagg cggcggcccg gacgtcggcc tccgtgtagg
      361 tgccgatccc catggtgaac cgctcgagca gctcccgggc gaagttctcg ttggggttgg
      421 ccgccttgtc cgacgaggcg tccagccaga tgagcatcgc cgggtcgacc gccaccgcct
      481 gggtgagggc ctggaagtcc cccggcccga gggtccggaa cagctggttc tgccgataca
      541 tgaacggcgc gaagtggacc ttcgagaggg ccgtcgggaa gtggccgtgg aggaggaagg
      601 tcagcttctc ctgggcggga ttggtcgtcg ccaccatccg ggccacccac cacgcgacga
      661 ggtcccggtc ctcggtgcgg atggcgtcga tgtagctctg gcgggtcgcc gggtcggtcg
      721 agcgcagcgc cccgagcgag atcggcgtga aggccggcac cgggacggcg tcgccgcccg
      781 gatcgggctg gccgagcccc gagaggagca ggtccaccgt cgcgccgtac ccggccgaga
      841 cgccggcggc gagctcggcc ggcgaggcgc cgaagccgag ccggcggtag aggagggaga
      901 tcgcgctggt cgggtcgagc gtcatcgccc ctcactcctg cggagccgac ccggtcgcat
      961 gaaaccccca gctcgtacct tctgggccaa tcctccgaac cggccgtgag gcgccgatgt
     1021 ccgagatgtt agggacctgt taaggagcgg gcgcggcctc gctcaggcgg ccccacgccc
     1081 ggcgaagaag ccgccgaacc caccgaaccc gccggcagcg gtgcagccgc tcttcggagc
     1141 cggacgaatg ctgatggtgt tcgccgtgat ggccccgatg tcgttggccg gaccgagcgc
     1201 agtggcacag accccgacgg ccaggttgga cgccgacacc tgctcggtgg tcgtgaacat
     1261 ggtcttcgtg ccgaacgcga ccttggtctc gacggccttg agggccggcc tcgtcggccg
     1321 ggtcgtcgac gtcgaaccct tggtctaggt cgacgcagcc ggcctggccc cgggggcgaa
     1381 gcccttcacg acgaaggtgg acttcgactt ctcgatcacc ttgccgctcg cgaaccggcc
     1441 gagcgcaccg gtgccgaacc ggctggcgcc cgaccgccgc gggaagctgc cacccggggc
     1501 ggtcccgaca aagcctcggg caccggaacc gccgccgaac ccaccggagc cggtgggcgg
     1561 cgcccccgcg aggccgaacc ctccggcccc cgagcacgag ccgttcgtgc tcggccggag
     1621 ggagacggtg gtcgcggcga tgggaccggt cttgttcttg gaggcggaga cgacggtgac
     1681 gcagtcaccg accaccagct tcgtggccgc gatggtgacc gtctcgctga acctcgtcgt
     1741 cgtcgtccac gacaccgtca cctgacccga gctcgggctc tgcacctcca tcgagctcgt
     1801 ggcggtcgac agtgcggcca cggtgcccga ggcggtcgag aacgacggtc gcggcgtggt
     1861 ggtggtggtc gtcgtcgcgg cgaaggcgac cccggcggtc gcggcgaccg tggccagagt
     1921 ggccaggccg acggcgaggg gcagcggcgc ggcgcgccat gaacgtcgtg tcctcattgg
     1981 gtgcctcccg ggtgtgacgg ctcgacggag cggtgcgcgg tcattcggtc ctcagagcct
     2041 cgatgggcga gagccgggcg gcccggctcg ccgggtagac gccgaagacg ag
//
LOCUS       DATGJT010000255         3582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_346575, whole genome shotgun sequence.
ACCESSION   DATGJT010000255 DATGJT010000000
VERSION     DATGJT010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346575"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VKX24_04355"
     CDS             complement(<1..508)
                     /locus_tag="VKX24_04355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07744.1"
                     /translation="MADSTEPGSGRRGRRGPGDPGPAPVLDRLRAAFLKPAPSGDGSG
                     TPAEARSLDELRAAERYADDGERFLGLVAAPLGAAIGFFISNYLIDHDPPARLNGAVN
                     PLHASVATYHVLELVLLALSLVILAMAWYRRRLFLGMALALYGLGVFNLHYWGFGVPF
                     VAAGAWLLV"
     gene            630..1058
                     /locus_tag="VKX24_04360"
     CDS             630..1058
                     /locus_tag="VKX24_04360"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HLJ07745.1"
                     /translation="MPRTIAKDVDLSKIWLFAACSERDLRKVRQSLDEISAEAGEVLC
                     EEGTTGHEFFIIVKGTAAVRRKGRKVVTLGPGKWFGELALLDRGPRSATIEAETDMEL
                     LVLEQRHFLGLLDSMPSMARKMLGALASRLREADEKAFPG"
     gene            1063..1488
                     /locus_tag="VKX24_04365"
     CDS             1063..1488
                     /locus_tag="VKX24_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017934705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HLJ07746.1"
                     /translation="MELDQAVAFARARQHGVVVTIRRDGRPQLSNIIYLMDQDGSARI
                     SVTETRAKTKNLRRDHRAQLYVPGDSFWEYAVLEGSAQLSPPAADPDDEVVDELVELY
                     RAIRGEDHPDWDDYRRAMVEERRVVLNFRPTSAYGQLRS"
     gene            complement(1537..3576)
                     /locus_tag="VKX24_04370"
     CDS             complement(1537..3576)
                     /locus_tag="VKX24_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020518132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLJ07747.1"
                     /translation="MLVRVVIGMSATGLALGIAGHRFWTISRLIRSGKPAPERVRGLR
                     SRAEAELVEVGGQKKLLRWTVPGLAHAFTFWGFTILLFTIIEAYGDLFSKTFAIWGFG
                     HNPVLGFIEDFFIVAVLIALGVFAVIRLKNAPARRDRASRFYGSHLDAAWITLVLIAC
                     VMITLLLYRAAQTNTGDFPYTWWAFASHGIGKALHPLGAGTNSVLETVFVILNIAVIM
                     GFLVFVSYSKHLHIAAAPLNVAASRRPRALGALDKTPDMDMENVSEDTVFGAGLVEHF
                     TWKQMLDFVTCTECGRCQSVCPAWNTGKPLSPKLVIMGLRDNMFANASRLLAANGSSP
                     ESEPETLVPHTIEPDVLWSCVTCGGCVEECPVDIEHVDAIVDMRRYEVLMESRFPSEA
                     GLMLRNIENQGDPWGLGASKRTDWIQTLDFEVPVVTDTIPDGIEYLYWVGCAGALDER
                     ARKGVQATARMLHRAGVSFAILGPKESCTGDPARRMGNEYLYQEQAKANVETLKGVGA
                     RKIIATCPHCFNSIKNEYPVLGGDFEVVHHSELLDHLVSTGRLTPGQGYAGTVTYHDP
                     CYLGRHNRVFDEPRSVLDAIPGVRQVEMRRCREKSFCCGAGGARMWMEETIGKRINME
                     RTDEALGTGADVVSTACPYCMIMLDDAVRANAKEDEVRVLDLSQLVEESLATPAP"
BASE COUNT          574 a         1206 c         1276 g          526 t
ORIGIN      
        1 ggacgagcag ccaggcgccg gcggcgacga aggggacccc gaatccccag tagtgcaggt
       61 tgaacacccc gaggccgtag agggcgagag ccatcccgag gaagagccgc cgccggtacc
      121 aggccatggc caggatcacg agcgagagcg cgagcagcac cagttcgagc acgtggtagg
      181 tggccacgct cgcatgcagg gggttcaccg caccgttcag gcgggccggc gggtcgtggt
      241 cgatgaggta gttgctgatg aagaacccga tcgccgcgcc gagcggtgcc gcgacgaggc
      301 ccaggaaccg ctccccgtca tccgcgtagc gctcggccgc ccggagctcg tcgagcgacc
      361 gcgcctcggc cggtgtgccc gacccgtcgc cggacggcgc cggtttcagg aaagccgcac
      421 ggagccggtc gaggaccggg gcgggcccgg ggtccccggg cccgcgtcgg ccacggcggc
      481 ccgatccggg ctcggtgctg tcggccatcc ggcgcaggct agcccggggc gatcggccgt
      541 cccgcggcga cgtcgtacgg gggtgcgccc gccctccgcg ccgccaaacg aaaagacgca
      601 gtgacgctcg gacggctacc cttcccccca tgccacggac gatcgcaaag gatgtcgacc
      661 tttcgaagat ctggctcttc gccgcgtgct ccgagcgcga cctccggaag gtgcgccagt
      721 cgctcgacga gatctcggcc gaggccggcg aggtcctctg cgaggagggc acgaccggcc
      781 acgagttctt catcatcgtc aagggcacgg cagcggtccg acgcaagggc cgcaaggtgg
      841 tgacgctcgg tcccgggaag tggttcggcg agctcgccct gctcgaccgg gggccccggt
      901 cggccaccat cgaggccgag accgacatgg agctcctggt gctcgagcag cggcacttcc
      961 tcggtctgct cgacagcatg ccgtcgatgg cccgcaagat gctcggggcg ctggcgtcac
     1021 ggctccggga ggccgacgag aaggcgttcc ccggctagcc cgatggagtt ggaccaggcc
     1081 gtcgccttcg ccagagcccg gcagcacggt gtggtcgtca ccatccgccg ggacgggcgg
     1141 ccccagctct cgaacatcat ctacctgatg gaccaggacg gctcggcccg catctcggtc
     1201 acggagaccc gggccaagac gaagaacctg cgccgcgacc atcgggcgca gctgtacgtg
     1261 cccggcgact ccttctggga gtacgccgtc ctcgaagggt cggcgcagct cagcccgccg
     1321 gcagcggatc ccgacgacga ggtcgtggac gagctggtcg agctctaccg cgcgatccgc
     1381 ggcgaagacc acccggactg ggacgactac cgacgggcca tggtcgagga gcgccgggtc
     1441 gtcctcaact tccgaccgac ctcggcctac ggccagctcc ggtcctgaac cgaacggggg
     1501 tcctctcggg ggccgtgctg cgcccggtgg tgacccctac ggcgcgggag tggcgagcga
     1561 ctcctcgacc agctgggaga ggtcgaggac gcggacctcg tcctccttgg cgttcgcccg
     1621 gacggcgtcg tccagcatga tcatgcagta ggggcaggcg gtggacacga cgtcggcccc
     1681 ggtgccgagc gcctcgtcgg tgcgctccat gttgatccgc ttgccgatcg tctcctccat
     1741 ccacatgcgg gcgcccccgg caccgcagca gaagctcttc tcccggcagc ggcgcatctc
     1801 gacctggcgg actcccggga tggcgtcgag caccgaacgg ggctcgtcga acacgcggtt
     1861 gtggcggccg aggtagcacg ggtcgtggta ggtgaccgtc ccggcgtaac cctgcccggg
     1921 ggtgaggcgc cccgtcgaga ccaggtggtc gaggagctcg gagtggtgga cgacctcgaa
     1981 gtcaccgccg aggaccgggt actcgttctt gatgctgttg aagcagtggg ggcaggtggc
     2041 gatgatcttg cgggccccga cgcccttcag cgtctcgacg ttggccttcg cctgctcctg
     2101 gtagaggtac tcgttgccca tccggcgcgc cgggtcgccg gtgcaggact ccttcggccc
     2161 caagatggcg aaggagaccc ccgcccggtg gagcatccgg gccgtcgcct ggaccccctt
     2221 cctggcccgc tcgtcgaggg cgcccgcaca gccgacccag tagaggtact cgatgccgtc
     2281 ggggatcgtg tcggtcacga ccgggacctc gaagtcgagg gtctggatcc agtccgtgcg
     2341 cttgctcgcc ccgagccccc aggggtcgcc ctggttctcg atgttgcgga gcatcagtcc
     2401 ggcctccgag gggaaccgcg actccatcag cacctcgtag cgacgcatgt cgacgatggc
     2461 gtcgacgtgc tcgatgtcga cgggacactc ctcgacgcag cccccacagg tgacacacga
     2521 ccagagcacg tccggctcga tggtgtgcgg gaccagggtc tcgggctccg actccggact
     2581 gctcccgttg gcggcgagga gtctcgaggc gttggcgaac atgttgtcgc gcaggcccat
     2641 gatgaccagc ttgggcgaga gcggcttgcc ggtgttccag gcggggcaga ccgactggca
     2701 gcggccgcac tctgtgcagg tcacgaagtc gagcatctgc ttccaggtga agtgctcgac
     2761 caggccggcg ccgaagaccg tgtcctcgct gacgttctcc atgtccatgt cgggtgtctt
     2821 gtcgagggca cccagggcac ggggccggcg cgaggcggcg acgttgaggg gcgcagcggc
     2881 gatgtgcagg tgcttggagt acgacacgaa caccaagaac cccatgatca cggcgatgtt
     2941 caggatgacg aacaccgtct cgaggacgct gttggtgccg gcgccgagcg ggtgcagggc
     3001 tttgccgatc ccgtgggagg cgaaggccca ccaggtgtag gggaagtcgc cggtgttggt
     3061 ctgggccgcc cggtagagga gcagcgtgat catcacgcag gcaatgagga ccagggtgat
     3121 ccaggcggcg tcgaggtggc tgccgtagaa ccgtgaggcc cgatcccggc gggccggcgc
     3181 gttcttgagg cggatcaccg cgaacacccc gagggcgatc agcaccgcca cgatgaagaa
     3241 gtcctcgatg aacccgagca ccgggttgtg gccgaagccc cagatcgcga acgtcttcga
     3301 gaagaggtcc ccgtaggcct cgatgatcgt gaacagcagg atcgtgaagc cccagaaggt
     3361 gaaggcgtgg gccagccccg gcacggtcca gcggagcagc ttcttctgcc caccgacctc
     3421 gacgagctcg gcttccgccc tggatctcag gcctcggacc cgctcggggg ccggcttgcc
     3481 cgagcggatc agcctggaga tggtccagaa ccggtgcccg gcgatgccca aggcgagacc
     3541 cgtcgcgctc attccgatga cgactctcac cagcatcttc ag
//
LOCUS       DATGJT010000256         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_656991, whole genome shotgun sequence.
ACCESSION   DATGJT010000256 DATGJT010000000
VERSION     DATGJT010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656991"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VKX24_04375"
     CDS             complement(<1..363)
                     /locus_tag="VKX24_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013287375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ07748.1"
                     /translation="MIEIPMSERRHAKLLERALFEVKKVVVGQDRMTERLFICLLARG
                     HVLLEGAPGLAKTLAAETLARTVGGDFARLQFTPDLVPADLVGTRIYKASSESFEIEL
                     GPVFANVVLADEINRAPAK"
     gene            461..1006
                     /locus_tag="VKX24_04380"
     CDS             461..1006
                     /locus_tag="VKX24_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07749.1"
                     /translation="MVTDEGLASLRMAATLALTLPTVRLRIESPTAVLAEVGWHLDGP
                     VKPCAFRRAVARAWNQRRQGVEVDFCGLGDARPVITITLAPGERVLPGDIYQVRAEGG
                     GWHHVVPTLLSPEACHTVLGLDGPPLAFHDDPVTGVTLVHAETDEPDLDRPPHLACHL
                     TAIRGRLLAEEVIADPLMIRR"
     gene            1121..>2170
                     /locus_tag="VKX24_04385"
     CDS             1121..>2170
                     /locus_tag="VKX24_04385"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HLJ07750.1"
                     /translation="MLARLARRCYHRRRLVLLAWIGLLIVAVVAGTAFKGTWATSGRL
                     PGTDSQKAYDLLKADFPGRAGDDGAFVFSDVTADRPAVDDFLRKAGAVAGVTAVQPLE
                     ISPVDGRVATASFTLANNSEAVRKAAVADLKDLAKPLAGQGDEVAFASPWFDPQTMPS
                     SEGLGLLAAIVVLLVAFGSVVAMGLPIVTALLGIGIAVSLIGVMARFMSTPEFTPEVA
                     TMIGLGVGIDYALFIVSRYRDALSRLRPPEEAVVEAISTAGRAVLFAGCTVMISVLGM
                     LLMGLQFLYGLAVGTSIAVLVAVGAALTLLPALLGFLGFNVDKLSIHRKRPAGQTKIG
                     GWTRWADFVQHHPWPV"
BASE COUNT          288 a          810 c          728 g          344 t
ORIGIN      
        1 cttggccggc gcccggttga tctcgtcggc cagcaccacg ttggcgaaca ccgggccgag
       61 ctcgatctcg aacgactcgc tcgacgcctt gtagatgcgg gtgccgacga ggtcggcggg
      121 cacgaggtcg ggggtgaact gcaggcgggc gaagtcgccg cccacggtcc gggccagcgt
      181 ctcggcggcc agtgtcttgg ccagccccgg cgcgccctcg aggagcacgt gaccccgggc
      241 cagcaggcag atgaagagcc gctcggtcat gcggtcctgg ccgacgacga ccttcttgac
      301 ctcgaacagg gcccgctcca gcagcttggc gtgacgtcgt tcgctcatcg gaatctcgat
      361 catggcaaga ggatcggacc gacacctggg agtttcctgg gagcggacca ggaacgtccc
      421 gggacttgaa tttaggtttg cctaatataa aatgttcggc atggtgacag acgaagggct
      481 ggcgtcgctc cgcatggccg ccacgctggc gttgaccctc ccgacggtgc ggttgcggat
      541 cgaatccccg accgccgtcc tcgccgaggt gggctggcac ctcgacgggc cggtcaagcc
      601 ctgcgccttc cggagggccg tcgcacgggc gtggaaccag cgccgccaag gcgtcgaggt
      661 cgacttctgc gggctgggcg acgcccggcc ggtgatcacg atcaccctcg cccccggcga
      721 gcgggtcctg ccgggcgaca tctaccaggt gcgggccgaa ggcggcggct ggcaccacgt
      781 cgtgccgacc ctcctgtcgc cggaagcctg ccacaccgtc ctcggcctcg acggcccgcc
      841 gctggccttc cacgacgacc cggtgaccgg ggtcaccctg gtgcacgccg agaccgacga
      901 gccggacctc gaccgcccgc cgcacctggc ctgccatctc acggccatcc ggggccggct
      961 gctggccgag gaggtgatcg ccgacccgtt gatgatccgc cggtgatttg tgggtgacga
     1021 gccggcccaa accggcagga tcctcaagcg cgggggtggg catgccgaga cattcccctg
     1081 agaatcgtct cgcctcttgt cccgcaccct tggaggaccc gtgctcgctc gtctcgcccg
     1141 ccgctgctac caccgccggc gtctcgtcct gctggcctgg atcggcctgc tcatcgtggc
     1201 cgtcgtggcc ggcaccgcct tcaagggcac ctgggccacc agcggccgcc tgcccggcac
     1261 cgactcgcag aaggcctacg acctgctgaa ggccgacttc cccggccggg ccggcgacga
     1321 cggcgccttc gtgttctccg acgtgactgc cgaccggccg gcggtggacg acttcctccg
     1381 gaaggccggc gccgtcgccg gcgtgaccgc cgtccagccg ctcgagatct cgcccgtcga
     1441 cgggcgggtc gccacggcct ccttcacgct ggccaacaac agcgaagccg tccgcaaggc
     1501 ggccgtcgcc gacctcaagg acctggccaa gccgctcgcc ggccagggcg acgaggtggc
     1561 cttcgccagc ccctggttcg acccccagac catgccgtcg agcgagggcc tcggtctgct
     1621 cgccgccatc gtcgtgctgc tcgtcgcctt cgggtcggtg gtggccatgg gcctgccgat
     1681 cgtcaccgca ctgctcggca tcgggatcgc cgtgagcctc atcggggtca tggcccggtt
     1741 catgtcgacg ccggagttca cccccgaggt ggcgacgatg atcggcctcg gcgtgggcat
     1801 cgactacgcc ctgttcatcg tctcccgcta ccgcgacgcc ctctcccgcc tgcgcccgcc
     1861 ggaggaggcc gtcgtcgagg ccatctccac cgccggccgg gccgtgctct tcgccggctg
     1921 caccgtgatg atctccgtcc tcggcatgct gctgatgggc ctccagttcc tctacggcct
     1981 cgccgtcggg acctcgatcg ccgtgctcgt ggcggtgggg gcggcgctca cgctgctgcc
     2041 ggcgctgctc ggcttcctcg ggttcaacgt cgacaagctc tcgatccacc gcaagcggcc
     2101 ggccggccag acgaagatcg gcggctggac ccgctgggcc gacttcgtcc agcaccaccc
     2161 ctggcccgtc
//
LOCUS       DATGJT010000257         3030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_34122, whole genome shotgun sequence.
ACCESSION   DATGJT010000257 DATGJT010000000
VERSION     DATGJT010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34122"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="VKX24_04390"
     CDS             complement(<1..730)
                     /locus_tag="VKX24_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07751.1"
                     /translation="MSPLRFRANSRLWRTVALLLAPAIAVAFLPTLIDGRGSGSASAL
                     PGAAGAAYAQALSAADSAGQAPNDIAQGDDGSAPPAGYWMVGRDGGIFSFGASKFFGS
                     TGSVKLNRPIVGMAADRVGDGYWFVGSDGGVFAFGGAQFYGSTGAIRLNQPIVGMAAT
                     PDGHGYWLVASDGGIFAFGDAAFYGSTGAIKLAQPVVAMARTADGKGYWMVASDGGVF
                     NFGDAKFYGSTGRIHLAAPIVGIVP"
     gene            complement(873..1862)
                     /locus_tag="VKX24_04395"
     CDS             complement(873..1862)
                     /locus_tag="VKX24_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Virginiamycin B lyase"
                     /protein_id="HLJ07752.1"
                     /translation="MKARITTAVSVAAVALVAAACGGGGAATHFALRTKNSQPAGITT
                     GPDGHVWFTEFTSGRIARVNSAGKIDEYPVPTGRAGPFDITTGLDGNLWFTEFAANKI
                     GRITPAGTVTEFPLPPKGGPYGIGAGPDGNVWFALQKADAIGRITPAGAVTVFPIPYR
                     GPVRPSPWGVAAGKDGNIWFTEEGLDKIGRLTPAGQLTEFPVTAKSGPADITLGPDGN
                     VWFTEHYSGKIGRITPDGVVSDFPIGQKNSAPKGIVAAADGNLWFTDVGTNKIGRVTP
                     TGEVKDFGVGGGYRQLQGIAAGPDGNLWFTETHANTVSRYTLERSSAEARPGR"
     gene            2000..2869
                     /locus_tag="VKX24_04400"
     CDS             2000..2869
                     /locus_tag="VKX24_04400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07753.1"
                     /translation="MPFFRPRPLLGLAVATALVTLAAGWGAVIPPAGAAGSSFQIGLI
                     GDTGYSTGLDADLLAVRASMAGSGLAFEVHDGDIQKQGSPCTDSRLLYVKGVFNGFAA
                     PFVYTPGDNEWANCPNPSSRLSAIRRTFFSSSKTLGRTTMSVARQGGTPENARWSRNG
                     VFFATLNVPGPKGSGGPISADVSWVNATFDAAEAAGAAGVMIIQQDDPFAGGTPGALI
                     NAVHARTIEFGRPVVLVNGDTHIHRVDKPWKDAPNFTRVETYGDSGTNHWVKATVNPS
                     SAAVFSFSSVTAK"
BASE COUNT          437 a         1063 c         1070 g          460 t
ORIGIN      
        1 tcggaacgat gccgacgatc ggcgcggcca ggtggatccg gccggtggag ccgtagaact
       61 tggcgtcgcc gaagttgaac accccgccgt cagacgccac catccaatag cccttgccgt
      121 cggccgtgcg ggccatggcc acgaccggct gggccagctt gatggcgccc gtcgatccgt
      181 agaaggcggc gtcaccgaag gcgaagatcc cgccgtcgga ggccacgagc cagtacccgt
      241 ggccgtccgg ggtggcggcc atcccgacga tcggctggtt gagcctgatc gctccggtcg
      301 agccgtagaa ctgggcgccg ccgaaggcga agacgccccc gtcggagccg acgaaccagt
      361 acccgtcgcc cacccggtcg gcggccatac cgacgatcgg ccggttcagc ttgacgctgc
      421 cggttgagcc gaagaacttc gaagcgccga aggagaagat gccgccgtcc cggccgacca
      481 tccagtatcc cgccggcggg gcggagccgt cgtcaccctg ggcgatgtcg ttcggcgcct
      541 ggccggcgga gtcggcggcc gacagcgcct gggcgtaggc cgccccggca gcaccgggca
      601 gggccgaggc gctgccggag ccgcggccgt cgatgagcgt gggaaggaag gccacggcga
      661 tggcgggggc gagcagcagg gcaacggtgc gccagagcct gctgttggcg cgaaagcgca
      721 gcggggacat gcccaggaat ttcccgggat tcctgcgagc acctccctcg acaattcaat
      781 gtttgctcag gtggacaagg ttcgccgggt ttgtgcggga agccggaccg gccgttcagc
      841 cgggcgtcgg ttgccttcgg cgggcggagg cgctagcggc ccggcctggc ttcggccgag
      901 gagcgctcga gggtgtagcg ggagaccgtg ttggcgtggg tctcggtgaa ccagaggttc
      961 ccgtcgggcc cggcggcgat tccctgcagt tgccggtatc ccccgccgac gccgaagtcc
     1021 ttcacctcgc cggtgggggt gacgcgcccg atcttgttgg tgccgacgtc ggtgaaccac
     1081 aggtttccgt cggcggcggc gacgatgccc ttcggagcgc tgttcttctg gccgatgggg
     1141 aagtcgctga cgacgccgtc gggcgtgatc cggccgatct tgcccgagta gtgctccgtg
     1201 aaccacacgt tgccgtccgg cccgagcgtg atgtcggcgg ggccgctctt ggccgtcacc
     1261 gggaactcgg tcaactgacc ggccggggtg agccggccga tcttgtcgag gccctcctcg
     1321 gtgaaccaga tgttgccgtc cttcccggcg gccacgcccc agggactggg ccggacgggc
     1381 cccctgtagg gaatggggaa caccgtcacc gcgccggccg gcgtgatccg gccgatggcg
     1441 tcggcctttt ggagggcgaa ccagacgttg ccgtcaggcc cggcgccgat gccgtagggg
     1501 ccgcccttcg gcggcagcgg aaactccgtg acggtgccgg ccggcgtgat gcggccgatc
     1561 ttgttggccg cgaactcggt gaaccacaga ttgccgtcca ggccggtggt gatgtcgaac
     1621 ggcccggccc gaccggtggg gacgggatac tcgtcgatct tcccggcgct gttgacccgg
     1681 gcgatccggc cggaagtgaa ctcggtgaac cagacatggc cgtcggggcc ggtcgtgatc
     1741 ccggccggct ggctgttctt cgtgcggagg gcgaagtgcg tcgccgctcc gccgccgccg
     1801 caggcggcgg ccaccagggc gactgcggcg accgaaaccg cggttgtgat ccgggccttc
     1861 atcgttccgt cttctccctc tgccggccgg cgcgaggcgg cgggcggagc gttctccgca
     1921 agtaggagga ttcgcccttc tcgtatcgaa ttccttcaat acccccgatt ccggcaatca
     1981 ggccttatcc ggaggttcca tgcctttctt ccgcccccgc ccgctgctcg gtctcgccgt
     2041 cgccacggcc ctcgtgacgt tggccgccgg ctggggcgcg gtgatcccgc cggccggggc
     2101 cgccgggtcc tcgttccaga tcgggctcat cggcgacacc ggctactcca ccgggctgga
     2161 cgccgatctc ctcgccgtcc gggccagcat ggccggctcg gggctcgcct tcgaggtcca
     2221 cgacggagac atccagaagc agggaagccc ctgcaccgac agccggctcc tctacgtcaa
     2281 gggcgtgttc aacgggttcg ctgcaccgtt cgtctacacc ccgggggaca acgagtgggc
     2341 caactgcccg aacccgtcgt cgcgcctgtc ggccatccgg cgcacgttct tctccagcag
     2401 caagacactc ggcaggacga cgatgagcgt ggcccgccag gggggcacgc cggagaacgc
     2461 ccgctggagc cgcaacgggg tgttcttcgc cacgctcaac gtccccggtc ccaaaggctc
     2521 gggcgggccg atctcggccg acgtgtcgtg ggtcaacgcc accttcgacg ccgccgaggc
     2581 ggccggggcg gccggcgtga tgatcatcca gcaggacgac cccttcgccg gcggcacgcc
     2641 cggcgccctc atcaacgccg tccacgcccg cacgatcgag ttcggccggc ccgtcgtcct
     2701 cgtcaacggg gacacccaca tccaccgggt ggacaagccg tggaaggacg ccccgaactt
     2761 cacccgggtc gagacctacg gcgactcggg aaccaaccac tgggtgaagg ccacggtcaa
     2821 cccgtccagc gccgcggtgt tcagcttctc gagcgtgacg gccaaatgag ctgaccccga
     2881 ctgggtcaat gctccagccg ccccccggtg gcgacctcgg ggccggtgcg gattccccgc
     2941 aggccgtacc acaccagctc cgccgtccag tgggccagga tctcgggatc gtgctcggca
     3001 ctgctgtcgc gcaaggcccg ccggccgacg
//
LOCUS       DATGJT010000258         3064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_553657, whole genome shotgun sequence.
ACCESSION   DATGJT010000258 DATGJT010000000
VERSION     DATGJT010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_553657"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..526)
                     /locus_tag="VKX24_04405"
     CDS             complement(<1..526)
                     /locus_tag="VKX24_04405"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ07754.1"
                     /translation="MSTIEPAPFVPSQPDSGNLPPSPWRVFGSSDYFRLWMAQVVSSL
                     GDWIGLVAVVALAARVSHGSSAAVGLVMAARMAPGFFLAPVGGVLVDRWDRRRTMVIC
                     DIGRSAIVATLPFVDTLLGLFLASFLLEILTLLWSPAKDASVPNLVPEKKLAAANSLS
                     MAAAYGTFPVGSAVF"
     gene            complement(539..>3064)
                     /gene="topA"
                     /locus_tag="VKX24_04410"
     CDS             complement(539..>3064)
                     /gene="topA"
                     /locus_tag="VKX24_04410"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012157752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HLJ07755.1"
                     /translation="GVDVDNDFKPLYIVPPEKKAQVTKLKQLLKDADEVYLATDEDRE
                     GEAIAWHLLEVLSPRVPVRRMVFHEITRAAIADAVDHWRELDRKLVDAQETRRILDRL
                     VGWDISEVLWKKVSPRLSAGRVQSVATRLVVERERARMAFRSAGYWDLEGTFEARGVT
                     FGATLTSLDGKRLASGKDFEPTTGQLTAAAAGTVALLDEAAARGLVGRLTGADFSVSS
                     VESRDWKQAPHPPFMTSTLQQEAGRKLRFGAERTMRLAQKLYEAGYITYMRTDSVSLS
                     EQAIAAARAEISERYGADHLPERPRLYSRKVKNAQEAHEAIRPAGDRFRRPEDVAREV
                     DTDAARLYDLIWKRCVASQMADARGRRVSLRLAADSSAGEAAVFSASGRTITFAGFLR
                     AYVEGSDDPDAELEDRETRLPTVEQGEALANRGLEAAGHATQPPARYTEASLVAELET
                     RGIGRPSTYASVIETIQDRGYVWKKSSALVPSWTAFAVIRLLEEHFANLVDYEFTARM
                     EETLDDIARGERESVPWLRQFYFGNGVVGLRTMVEQRVPEIDAREINTIPLGPDAEGR
                     DIVVRVGRFGPYLSRGDQTAPVPDGIAPDELTPAIASELLERGPEEGRVLGVDPATGL
                     EVTVRDGRYGPYVQLGEQEEGSKKKPKRASLFKTMTPDTVTLEEALPLLSLPRLVGQD
                     AEGRDIVASPGRFGPYIKRGDDTRSLSSEEQLLTITLEEAEALLAQPKRGRGRQAAEP
                     LAELGASPDNGAPVKLLAGRYGPYVTDGTTNASLPKDADPAGVTLQQAVELLRARATS
                     GPAKRPARRAAGAKKATKSTAKATKAAKPAKAAKSTKKGSSPS"
BASE COUNT          395 a         1092 c         1142 g          435 t
ORIGIN      
        1 cgaacaccgc cgagccgacc gggaacgtgc cgtaggccgc cgccatcgac agcgagttgg
       61 ccgccgccag cttcttctcc ggcaccaggt tggggacgga ggcgtccttg gccggcgacc
      121 acagcagcgt caggatctcc agcaggaacg aggccaggaa caggccgagc agcgtgtcga
      181 cgaacgggag ggtcgccacg atggccgacc gcccgatgtc gcagatcacc atcgtccggc
      241 ggcggtccca gcggtccacc agcacgccac ccaccggggc caggaagaag cccggggcca
      301 tccgggcggc catgacgagg ccgacggccg ccgagctgcc gtgcgacacc cgggcggcca
      361 gcgccaccac cgccacgagc ccgatccagt cgccgaggct ggagacgacc tgggccatcc
      421 agagccggaa atagtcggac gagccgaaga cccgccaggg ggacggcggg aggttgcccg
      481 agtcgggctg gctggggacg aagggcgccg gttcgatggt cgacaagcgc cgatcagcct
      541 aggaggggga gctgcccttc ttcgtggact tcgccgcctt ggccggcttg gcggccttcg
      601 tcgccttggc ggtgctcttc gtcgccttct tggcgccggc ggccctgcgg gccgggcgct
      661 tggccggccc ggaggtggcc cgggcccgga ggagctcgac ggcctgctgc agcgtcaccc
      721 cggcggggtc ggcgtccttg ggcagcgagg cgttggtggt gccgtcggtg acgtaggggc
      781 cgtaccggcc ggccagcagc ttgaccggcg cgccgttgtc cggcgaggcg ccgagctcgg
      841 ccagcggctc ggccgcctgc cgcccccggc cccgcttcgg ctgggccagc agcgcctccg
      901 cctcctccag cgtgatcgtc aggagctgct cctcggacga caggctgcgg gtgtcgtcgc
      961 cccgcttgat gtaggggccg aaccggccgg ggctggccac gatgtcgcgg ccctcggcgt
     1021 cctgtcccac gagccggggc aggctgagga ggggcaaggc ctcctcgagc gtgacggtgt
     1081 cgggcgtcat cgtcttgaac aagctcgccc gcttgggctt cttcttcgag ccctcctcct
     1141 gctcgccgag ctggacgtag ggcccgtagc gcccatcccg cacggtgacc tcgagcccgg
     1201 tggccgggtc gaccccgagc acccgcccct cctccggccc ccgctcgagc agctcggagg
     1261 cgatggccgg ggtcagctcg tcgggggcga tgccgtcggg gacgggcgcc gtctggtcgc
     1321 cccgggagag gtacggcccg aagcggccga cccgcacgac gatgtcgcgg ccctcagcgt
     1381 cgggccccag cggaatcgtg ttgatctccc gggcgtcgat ctccggcacc cgctgctcca
     1441 ccatcgtccg gagccccacg acgccgttcc cgaagtagaa ctgccgaagc cacggcacgg
     1501 actcccgctc gccccgggcg atgtcgtcga gggtctcctc catgcgggcg gtgaactcgt
     1561 agtcgacgag gttggcgaag tgctcctcga ggagccggat gacggcgaag gccgtccagc
     1621 tcgggaccag cgccgagctc ttcttccaga cgtagccccg gtcctggatc gtctcgatga
     1681 cgctggcgta ggtggacggg cgcccgatcc cccgcgtctc gagctcggcc accagcgagg
     1741 cctccgtgta gcgggccggc ggctgggtgg cgtggccggc ggcttcgagg ccccggttgg
     1801 ccagcgcctc gccctgctcc acggtcggca gccgggtctc ccggtcctcc agctcggcgt
     1861 cggggtcgtc ggacccctcg acgtaggccc gcaggaagcc ggcgaaggtg atggtgcggc
     1921 cggaggccga gaagacggcg gcctccccgg cgctggagtc cgccgccagc cggagcgaca
     1981 cccgccggcc ccgggcgtcg gccatctggg aggcgacgca gcgcttccag atcaggtcgt
     2041 agaggcgggc ggcgtcggtg tcgacctccc gggcgacgtc ctcgggacgg cggaaccggt
     2101 cgccggccgg ccggatggcc tcgtgagcct cctgggcgtt cttgaccttg cgggagtaga
     2161 ggcggggccg ctccggcaga tggtcggcgc cgtagcgctc gctgatctcg gcccgggcgg
     2221 cggcgatggc ctgctccgag agcgagacgg agtccgtccg catgtaggtg atgtagccgg
     2281 cctcgtagag cttctgggcc aggcgcatcg tgcgctcggc gccgaagcgg agcttgcggc
     2341 cggcctcctg ctggagcgtg gacgtcatga acggcgggtg gggcgcctgc ttccagtccc
     2401 gcgactcgac cgaggagacg ctgaagtcgg ccccggtgag gcgcccgacg agcccgcggg
     2461 cggcggcctc gtcgaggagg gcgacggtgc cggcggcggc cgccgtcagc tgcccggtgg
     2521 tcggctcgaa gtccttgccg ctggccaggc gcttgccgtc gaggctggtc agcgtggcgc
     2581 cgaacgtgac tccccgggcc tcgaacgttc cctcgaggtc ccagtagccg gccgagcgga
     2641 aggccatccg ggccctctcc cgctccacca ccagccgggt ggccacgctc tgcacccggc
     2701 cggccgagag ccggggcgag accttcttcc acagcacctc ggagatgtcc cagccgacca
     2761 ggcggtcgag gatgcggcgg gtctcctggg cgtcgaccag cttccggtcg agctcccgcc
     2821 agtggtcgac ggcgtcggcg atggcggccc gggtgatctc gtggaacacc atccggcgga
     2881 cgggcacccg gggcgacagc acctccagca gatgccaggc gatggcctcg ccctcccggt
     2941 cctcatcggt ggcgagatag acctcgtcgg cgtccttgag aagctgcttg agcttggtga
     3001 cctgcgcttt cttctccggc gggacgatgt agagcggctt gaagtcgttg tcgacgtcga
     3061 cgcc
//
LOCUS       DATGJT010000259         4184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_864776, whole genome shotgun sequence.
ACCESSION   DATGJT010000259 DATGJT010000000
VERSION     DATGJT010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864776"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1503)
                     /locus_tag="VKX24_04415"
     CDS             complement(<1..1503)
                     /locus_tag="VKX24_04415"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HLJ07756.1"
                     /translation="MQLREVAALLDAPLDVPLEGADAAAELATEIADLAYDSRAVRPG
                     ALFFCLPGEVEDGHRWAGDAVRAGAVALVCERPVAAPAPQLLVASARHAMNLLAAPFF
                     GHPSRQLALAGVTGTNGKTTIAYMLEAIFAAAGAATGLVGTVESRVRGRHGTRAVRSR
                     RTTPESVDLQRLLSEMVDDGVAYCAMEVTSIGLEQGRVAGAAFAAAGFTNLTQDHLDY
                     HGDLESYYRSKRSLFTGGYLSGQDAFAAVNVADRYGARLAAEIAGSVRCVTVGLAGDL
                     AERPGTPPEPEVLGEVLEAGAGGSRLQITAAEGEVLTTGMEEVVHVRLPGRFNAANGL
                     TAAVIARGLGIPPDAVARGLEGLDRVPGRFELVEAGQDFAVVVDYAHTPDSLARILAA
                     ARDLGRVDRDGRSSRLIAVFGCGGDRDRAKRPLMGRAAAEAADRVYVTSDNPRSEDPE
                     AIMAGIEEGIAPAPPPLGYRLVADRAEAIAAALGEAGPGDVVVIAGKGHET"
     gene            complement(1526..3355)
                     /locus_tag="VKX24_04420"
     CDS             complement(1526..3355)
                     /locus_tag="VKX24_04420"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HLJ07757.1"
                     /translation="MPDFGSPVRAGGGFRPRVRLLFLLGTMSVCFVLIAGRLVWVQGV
                     DSSHYAALATIQRERTITLPASRGEIVDRNGNILAMSVDAKTIIADPHQISDPQAEAT
                     QLATLLGVPAADLVNDLSNGSGFSYVARQIDPATATKIMALNLPGITDVDDPKREYPD
                     GQLAAQVLGFVGSDNSGLSGLESTDNAALAGKPGTEEIQADPAGQEIVSAGSQETPPV
                     QGANIQLTLDQDIQFETESVLAQAVQSYHASGGSIVVMQPSTGDVLALANYPTFDPNE
                     FATATADDMTDRAVSDVYEPGSTNKVITASAALESGAVTTQTVISVPDTLKVAGSTFH
                     DAEYHPTLDLTLPQILEQSSNIGTIKIALQVGSSTLDKYLLKFGYGQPTGIGLPGESA
                     GLLPTLRNWSGTTLPTTAIGQGVAITVLQMASVYATIANGGIWEQPKIVAAEGNAAGK
                     MVAPPSAPPHRVIQPQTAKTITQMLLQVIDGSTGTGGEAAIPGYSVAGKTGTAEKPVA
                     GGYSGYVASFMGYAPAQDPQLVVGVVLDQPTPIWGADTAAPTFKTVMQYALQRLGIGP
                     GPASPAASGSGGPPLPAPARSGDAPAYPLPDPSSLPVAPGATD"
     gene            complement(3418..3987)
                     /locus_tag="VKX24_04425"
     CDS             complement(3418..3987)
                     /locus_tag="VKX24_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07758.1"
                     /translation="MARRIDTREEDTARRVRHLIVLPGGGADPVPEIVPLPEPAEPVV
                     GSAALQPAAVTVPLEAPAHPGLRLRLRVISRTVTAPKAPTMPFIVFASVLVSLAVLGL
                     VVLRVMVDQASFHVDDLSTRVAQQQSSLTQLNYDVSVADAPGAIASRAAALGMVPATR
                     IQPLPTPSAPAPAGGSTGSAAGSASGGGG"
     gene            complement(3987..>4184)
                     /gene="mraW"
                     /locus_tag="VKX24_04430"
     CDS             complement(3987..>4184)
                     /gene="mraW"
                     /locus_tag="VKX24_04430"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019120708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HLJ07759.1"
                     /translation="RTFADAAAGCRCPKDLPVCVCGAQARLRVLTRRPVLPSEAEVAA
                     NPRASSARLRVAERLGDGEAA"
BASE COUNT          560 a         1477 c         1574 g          573 t
ORIGIN      
        1 ggtctcgtgg cccttgccgg cgatgacgac gacgtcgccc ggccccgcct cgccgagcgc
       61 cgcggcgatc gcctcggccc ggtcggccac cagccggtag cccagtgggg ggggtgccgg
      121 cgcgatgccc tcctcgatgc cggccatgat cgcctcggga tcctcgctgc gcgggttgtc
      181 cgaggtgacg tagacccggt cggcggcctc ggcggccgcc cggcccatca gcgggcgctt
      241 cgcccggtcg cggtcgccgc cgcagccgaa gacggcgatc agccgggagg accgcccgtc
      301 ccggtccacc cggccgaggt cgcgggcggc ggcgaggatc cgggccaggc tgtcgggggt
      361 gtgggcgtag tcgacgacga cggcgaagtc ctggccggcc tcgaccagct cgaaccggcc
      421 ggggacccgg tccagcccct ccaggccgcg ggcgacggcg tccggcggga tccccaggcc
      481 ccgggcgatc acggcggcgg tcagcccgtt ggcggcgttg aagcgtcccg gcagccggac
      541 gtgcaccacc tcctccatcc ccgtggtcaa cacttctcct tcagctgcgg tgatctgcag
      601 gcgggagccg ccggcgccgg cctcgaggac ctcgcccagc acctcgggtt cgggcggcgt
      661 gccgggccgc tcggccaggt cgcccgccag gccgacggtg acgcagcgca ccgacccggc
      721 gatctcggcg gccaggcgcg cgccgtagcg gtcggcgacg ttgacggcag cgaacgcatc
      781 ctgcccggag aggtacccac cagtgaacag cgaacgcttg gagcggtagt aggactcgag
      841 gtcgccatgg tagtcgaggt ggtcctgggt caggttggtg aacccggcgg cggcgaacgc
      901 cgcgccggcg acccggccct gctcgagccc gatcgaggtc acctccatgg cgcagtaggc
      961 gaccccgtcg tcgaccatct cgctgagcag ccgctgcagg tcgaccgact ccggcgtcgt
     1021 gcgccgggac cggaccgccc tcgtcccgtg ccggccgcgc acccgggatt cgacggtccc
     1081 gaccagcccg gtcgccgccc cggcggcggc gaagatcgcc tcgagcatgt aggcgatcgt
     1141 cgtcttgccg ttcgtcccgg tcactccggc cagcgccagc tgccggctgg ggtgcccgaa
     1201 gaacggtgcc gccaggaggt tcatcgcgtg gcgggcggac gctacgagca gctggggcgc
     1261 cggggcggcc acaggccgct cacaaaccag tgcgacggcg ccggcccgca cggcatcccc
     1321 cgcccagcgg tggccgtcct cgacctcccc gggaaggcag aagaacaggg ctcccggtcg
     1381 caccgcccgg gagtcatagg caaggtccgc aatctcggta gcgagttccg cggctgcgtc
     1441 cgctccctca agcggaacgt cgaggggagc gtcgaggagg gcggcaacct ctcggagctg
     1501 catcggcgcc tcagcatcgc acgagtcagt ccgtcgcccc gggtgccacc ggcagcgagc
     1561 tggggtcggg gagcgggtag gccggagcgt ctccggaacg ggccggggcc gggaggggtg
     1621 gtcctcctga gcccgaggcg gccggggagg ccggtcccgg cccgatcccg agacgctgca
     1681 gcgcgtactg catgacggtt ttgaaggtcg gcgccgccgt gtccgccccc cagatcggcg
     1741 tgggctggtc gaggacgacc ccgacgacga gctgcgggtc ctgggcgggg gcgtagccca
     1801 tgaacgaggc gacgtagccg gagtagccgc cggcgaccgg cttctccgcg gtgccggtct
     1861 tgccggcaac cgagtagccg gggatggcag cctcgccgcc ggtcccggtc gagccgtcga
     1921 tcacctgcag gagcatctgg gtgatcgtct tggcggtctg cggctggatc acccggtgcg
     1981 ggggcgccga aggcggggcc accatcttgc cggcggcgtt gccttcggcg gcaacgatct
     2041 tcggctgctc ccagatcccg ccgttggcga tcgtggcgta gaccgaggcc atctgcagca
     2101 cggtgatggc cacgccctgg ccgatggcgg tggtcggcag cgtggtcccc gaccagttgc
     2161 gtagggtcgg cagcaggccg gccgactcgc cgggcaggcc gatgccggtc ggctggccgt
     2221 agccgaactt cagcaggtac ttgtcgaggg tcgacgaccc cacctgcagg gcgatcttga
     2281 tcgtgccgat gttggacgac tgctccagga tctggggcag ggtcaggtcc agggtcgggt
     2341 ggtactcggc gtcgtggaag gtgctgccgg cgaccttgag cgtgtccggc acgctgatta
     2401 ccgtctgggt ggtgaccgca cccgactcca gggcggcgga ggcggtgatc accttgttgg
     2461 tcgacccggg ctcgtacacg tcggagaccg cccggtcggt catgtcgtcg gcggtggcgg
     2521 tggcgaactc gttcgggtcg aacgtcgggt agttggccag ggccagcacg tcgccggtcg
     2581 agggctgcat cacgacgatc gacccgccgg aggcgtggta gctctggacc gcctgggcca
     2641 gcaccgactc cgtctcgaac tggatgtcct ggtccagggt gagctggatg ttggcgccct
     2701 gcaccggcgg ggtctcctgc gatccggcgg agacgatctc ctggccggcc gggtcggcct
     2761 ggatctcctc ggtgcccggc ttgccggcga gcgccgcgtt gtcggtcgac tccagcccgg
     2821 agaggccgct gttgtcgctg ccgacgaagc ccagcacctg ggccgccagc tggccgtcgg
     2881 ggtactcccg cttggggtcg tcgacgtcgg tgatgccggg caggttgagg gccatgatct
     2941 tggtcgccgt cgccgggtcg atctggcggg caacgtagga gaatccggac ccgttcgaca
     3001 ggtcgttgac caggtcggcg gccggcacgc cgagcagggt agccagctgg gtcgcctcgg
     3061 cttgcggatc ggagatctgg tgggggtcgg cgatgatcgt cttggcatcg accgacatgg
     3121 cgaggatgtt gccgttgcgg tcgacgatct cgccccggct cgccggcagg gtgatcgtgc
     3181 gctcccgctg gatggtggcg agggcggcgt agtgggacga gtcgacgccc tgcacccaca
     3241 ccagccgccc agcgatgagg acaaagcaga cggacattgt ccccagcagg aacagcagcc
     3301 gcacccgggg ccggaaccca cccccggccc ggaccgggct cccgaagtcg ggcaacgcgc
     3361 tccgaccccc tccggccggg gggaggccgg aagggggtcg agcccgcgtc agctgggtca
     3421 acctccgccc ccggaggcgg accccgccgc ggagccggtc gacccccctg ccggggccgg
     3481 cgcactgggc gtcggaagcg gctggatgcg ggttgccggc accatcccca acgccgccgc
     3541 ccggctggcg atcgcccccg gagcgtcagc gacggacacg tcgtagttca gctgggtgag
     3601 gctggactgc tgctgggcga cccgggtcga gaggtcatcg acgtggaacg acgcctggtc
     3661 gaccatcacc cgcagcacca ccagcccgag gaccgccagg ctcaccagca ccgatgcaaa
     3721 gacgatgaac ggcatggtcg gtgctttcgg agccgtgacc gtgcgtgata taaccctcag
     3781 cctaagcctt agaccaggat gagccggagc ttcgagtggc accgtcaccg cagcgggctg
     3841 gagcgccgcc gaccccacca ccggttcggc cggctcgggg agcggcacga tctcgggcac
     3901 cgggtcggcg cccccgcccg gcagcacgat caggtgccgc acccggcggg cggtgtcctc
     3961 ctcccgggtg tcgatccgcc gggccatcag gccgcctccc cgtccccgag ccgctcggcc
     4021 acccgcagcc gggcgctgga ggcccggggg ttggcggcga cctcggcttc cgagggcaac
     4081 accgggcggc gggtcagcac ccgcagccgg gcctgcgccc cgcagacgca caccggcaga
     4141 tccttcgggc agcggcagcc cgccgcggcg tcggcgaagg tgcg
//
LOCUS       DATGJT010000260         2979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1383141, whole genome shotgun sequence.
ACCESSION   DATGJT010000260 DATGJT010000000
VERSION     DATGJT010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383141"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VKX24_04435"
     CDS             complement(<1..362)
                     /locus_tag="VKX24_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07760.1"
                     /translation="MTRRPGVRGWAAGLVVAVVALTAAACGIPPDDHAILAAPGSVPF
                     DLLGQAPAATVTTLQAAPTERATIFLVQGERLAPVQRELPAPVSVESVLEALETGPTA
                     TEVQLGLRTALLAPGLVKS"
     gene            complement(359..1873)
                     /locus_tag="VKX24_04440"
     CDS             complement(359..1873)
                     /locus_tag="VKX24_04440"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLJ07761.1"
                     /translation="MERFSVTAATEAAAPLPRPEPGAAEATGPEPAPRRRRSRLGLRA
                     RSTVAFGCVALVLSATLAMMAYELTRSYLIKQRQSTAVRQAYVNARLARSVLRTPDPD
                     VPTILASLQTSSGSVAVLQYQGRWFASKVGIGPNAVPSDLRRNVLAGSVGRQRFSLDG
                     EPQVAVGVPLPAVDAFYFEFSPMAELERSLSLLARALALGAAVTAFVGAAVGRYASSR
                     VLRPLGGVATAASRISHGALDTRLDAKGDPDLAPLITSFNEMVDALQDRIDREARFAS
                     DVSHELRTPLAAIGSAVNIVRRRRHSPEEAAAALDVLEQQIESFQKLVLDLLEISRLE
                     SGTARLERELVEPDRFARSVLASTGRAAVPLGVEPGAPKEAMVDPRRLSQMLVNLLEN
                     ADKYAGGPTALIVSGNEDVVRFAVEDRGPGVPEHERHHIFERFARGESSSQPGAGDGT
                     GLGLSLVAEHARLHHGHVWVEERIGGGARFVVELPLIEYGPAGMPLPVPERSPS"
     gene            complement(1941..2783)
                     /locus_tag="VKX24_04445"
     CDS             complement(1941..2783)
                     /locus_tag="VKX24_04445"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012867114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HLJ07762.1"
                     /translation="MEFGVAASPALDAVGRWPVGVGAVGVTSPSATLAGTGPLDRPLP
                     LASVTKLLTAMAVLVAVEEETVRLDEPAGPEGSTVEHLLSHASGLGLDGERLAAPGRR
                     RIYSNAGFALLGELVAARAGMPFRRYATEAVLEPLRMQHTAAAGHPAWGAVGTAGDLL
                     ALGRELLLPGRVLSPAMTARATRVAFPGLDGVLPGFGRQRPNDWGLGFELRDGKAPHW
                     TGRRNSARTFGHFGRSGTFLWVDPDAGLACACVTDRDFGPWAAEAWPALSDAVIGSFG
                     GGDS"
BASE COUNT          394 a         1135 c         1116 g          334 t
ORIGIN      
        1 gacttgacca gtcccggcgc cagcagggcc gtccgcagcc ccagctgcac ctccgtggcg
       61 gtcggcccgg tctccagtgc ctcgagcacc gactccaccg acaccggtgc cggcagctcc
      121 cgctggacgg gcgccagacg ctcgccctgg acgaggaaga tcgtcgccct ctccgtcggg
      181 gcggcctgta gggtcgtcac ggtggccgct ggcgcctggc ccagcaggtc gaacgggacc
      241 gagccggggg cggccaggat ggcgtggtcg tccggaggga tcccgcacgc cgcggcggta
      301 agcgccacca cggcgaccac gagcccggcg gcccaccccc ggacgccagg gcggcgcgtc
      361 acgacggcga ccgctccggg acgggcagcg gcatccccgc cgggccgtac tcgatcagcg
      421 gcagctcgac cacgaaccgg gccccgcccc cgatccgctc ctcgacccag acgtggccgt
      481 ggtgcagccg ggcgtgttcg gcgacgagcg acagccccag gccggtgccg tcgcccgccc
      541 cgggctggga cgacgactcg ccgcgggcga aacgctcgaa gatgtggtgc cgctcgtgct
      601 ccgggacgcc gggaccgcgg tcctccaccg cgaaccgcac cacgtcctcg ttccccgaca
      661 cgatcagcgc cgtcggcccg ccggcgtact tgtcggcgtt ctcgagcagg ttgaccagca
      721 tctggctcag ccgccggggg tcgaccatcg cctccttggg ggcgccgggc tccaccccga
      781 gcggcaccgc cgcccggccc gtcgaggcca gcaccgagcg ggcgaagcgg tcgggctcga
      841 cgagctcccg ttccagccgg gccgtccccg actccagacg ggagatctcg agcaggtcga
      901 gtaccagctt ctggaagctc tcgatctgct gctcgagcac gtcgagggcc gccgccgcct
      961 cctccggcga gtgccgccgc cggcggacga tgttgaccgc cgatccgatg gcggccagcg
     1021 gcgtgcgcag ctcgtggctg acgtcggagg cgaagcgggc ctcccggtcg atgcggtcct
     1081 gcagggcgtc gaccatctcg ttgaacgagg tgatgagggg ggccaggtcg gggtcgccct
     1141 tggcgtcgag gcgggtgtcg agggcgccgt gggagatccg ggacgccgcc gtggccacgc
     1201 cgcccagcgg gcgcagcacc cggctgctgg cgtagcggcc gaccgccgcc ccgacgaagg
     1261 cggtgacggc ggcgcccagc gccagcgccc gggccagcag cgacagcgac cgctcgagct
     1321 cggccattgg ggagaactcg aagtagaagg cgtcgaccgc cgggagcggc acgcccaccg
     1381 ccacctgggg ctccccgtcg aggctgaacc gctgtcggcc gacgctgccc gccaggacgt
     1441 tccggcgcag gtctgaggga acggcgttgg gtccgatccc gaccttgctg gcgaaccagc
     1501 gcccctgata ctgcagcacg gccaccgagc cggagctcgt ctggagcgag gccaggatcg
     1561 tggggacgtc ggggtcgggc gtccgcagca ccgaccgggc cagccgggcg ttgacgtagg
     1621 cctggcggac ggccgtgctc tgccgctgct tgatgaggta gctgcgggtc agctcgtagg
     1681 ccatcatggc caacgtcgcg gagagcacga gggcgacgca gccgaaggcc acggtggacc
     1741 gggcccgcag cccgagccgc gaccgccgcc ggcggggcgc cggctcgggc ccggtggcct
     1801 cggccgcccc cggctcgggg cgcggcaacg gagccgccgc ctccgtcgcc gctgtcacgg
     1861 agaaccgctc cacccgctcc tcctcgttga ggctccgaga agatcgtcac acaccgcgag
     1921 ggccgccgcc cggacgcccg ctacgaatcg ccccctccga aactaccgat tacggcgtcg
     1981 gacagcgcag gccaggcctc ggcggcccac ggtccgaagt cccggtcggt cacgcaggcg
     2041 caggccaggc cggcgtcggg atcgacccac aggaacgtcc ccgaccggcc gaagtgcccg
     2101 aaggtgcggg cggagttccg ccggcccgtc cagtgcggcg ccttcccgtc ccgcagctcg
     2161 aaccccagcc cccagtcgtt gggccgctgg cggccgaacc cgggcaggac gccgtcgagc
     2221 cccgggaagg ccaccctggt ggcccgggcc gtcatcgccg ggctcagcac ccggcccggg
     2281 aggagcagct cccggcccag agccagcagg tcgccggccg tccccaccgc gccccaggcc
     2341 gggtgtcccg cggccgcggt gtgctgcatc cggaggggct cgagcacggc ttcggtggcg
     2401 tagcgccgga acggcatccc cgcccgggcc gccaccagct cgccgagcag ggcgaagccg
     2461 gcgttggaat agatacggcg ccggccgggg gcggcgaggc gttcgccgtc cagcccgagc
     2521 ccggaggcgt gcgagagcag gtgctccacc gtcgagccct cggggccggc cggctcgtcg
     2581 aggcggaccg tctcctcctc caccgccacg aggacggcca tcgccgtcag cagcttggtc
     2641 acggacgcca gcggcagcgg ccggtcgagc ggcccggtgc cggccagggt ggcggacggc
     2701 gacgtcacgc cgacggcgcc gacgccgacg ggccagcgtc cgacggcgtc gagggcgggg
     2761 gaggcggcca cgccgaattc catcacggct gattccagca tgagggccgg atgagccccg
     2821 gccggcggtg tcactcctcc ctgacgttcg gctgcgctat accaagcttc catggggagc
     2881 ctcgtggccg tcgacggcgg gcggagccgc tgccgggccg cgctgatcgg ggccggcggg
     2941 cggcccggcc cggtggccgt ggggccgggg ctcccggcc
//
LOCUS       DATGJT010000261         2248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1279860, whole genome shotgun sequence.
ACCESSION   DATGJT010000261 DATGJT010000000
VERSION     DATGJT010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279860"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VKX24_04450"
     CDS             <1..926
                     /locus_tag="VKX24_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018773700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HLJ07763.1"
                     /translation="VGRRIDEATPMVDARLPDGSRVNAVIHPLAIGGPFLTIRKFAKD
                     PFTVEDLINFGSFSRTVAQFLDACVKGRLNIIVSGGTGTGKTTALNVLSSFIPHDERI
                     VTVEDAKELQLHQDHVLALEARPPNIEGKGEVRIRDLVRNTLRMRPDRIVVGECRGGE
                     ALDMLQAMNTGHDGSITTVHSNSPRDTLARIETMVLMAGMDLPVRAIREQMASAVDLI
                     VHLTRLRDGTRRVTHVSEVQGMEGDVVVLQDLFLFDFGMSVDENGRFLGHLKSTGIRP
                     KFGERLADNGIRLRPEIFAQEPFARRMVGAR"
     gene            923..1900
                     /locus_tag="VKX24_04455"
     CDS             923..1900
                     /locus_tag="VKX24_04455"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLJ07764.1"
                     /translation="MIAVLMLLAAATAALFGVALTAIFGRQEDGLEQRLSAYAGKAPA
                     ADDDGDDAASPTFIESGLVQRAVGLTSKMAERGDLLVKVERLLEQANLPLRPAEALFF
                     YAAGVSLLGVVALTAAPTLAVGVVFTALTAALPVLVVRTLRRRRLKAFEAQLPDTLNL
                     LAGSLRAGYSFLQGLEAVVKETSEPMARELRRVLAEARLGRPLEDALGDVAVRIESRD
                     FDWSVLAIRIQREVGGNLAELLQTVAETMVQRSRLRGEVKALTAEGRISGIIMGLLPV
                     GLGLFMFTASPTYIDDLFGSVTGWAMVVGSAVMAVAGFAWIQKIIKIEV"
     gene            1904..>2248
                     /locus_tag="VKX24_04460"
     CDS             1904..>2248
                     /locus_tag="VKX24_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07765.1"
                     /translation="MLFFAVAGMFAAVFVATAVFLSAGEERRDVREALRNLAEYELPS
                     NVREQEMLKSIQERVVAPFVGRLGGLLGHFTPAGYREAVRDKLVAAGSPAGLDVDRFM
                     TLKVLGAVSVVFW"
BASE COUNT          310 a          794 c          800 g          344 t
ORIGIN      
        1 aggtcggccg ccggatcgac gaagcgacgc cgatggtgga cgcccggctg cccgacggct
       61 cccgggtcaa cgccgtcatc cacccgctgg ccatcggtgg cccgttcctc accatccgga
      121 agttcgccaa ggacccgttc accgtcgagg atctcatcaa cttcggctcc ttctcccgca
      181 cggtggccca gttcctcgac gcctgcgtca agggccggct caacatcatc gtcagcggcg
      241 ggacgggcac cggcaagacg accgccctca acgtgctgtc gtcgttcatc ccccacgacg
      301 agcgcatcgt caccgtggag gacgccaagg agctccagct ccaccaggac cacgtgctgg
      361 cgctcgaggc ccgcccgccc aacatcgaag gcaagggcga ggtccgcatc cgggacctcg
      421 tccgcaacac gctgcggatg cggcccgacc ggatcgtggt gggggagtgc cggggcggcg
      481 aggccctcga catgctccag gccatgaaca ccggccacga cgggtcgatc accaccgtcc
      541 actccaactc gccccgggac acgctggccc gcatcgagac catggtgctg atggccggga
      601 tggacctgcc cgtgcgggcc atccgggagc agatggcctc ggccgtcgac ctcatcgtcc
      661 acctcacccg cttgcgggac gggacgcgcc gggtcaccca cgtgagcgag gtgcagggga
      721 tggagggcga cgtcgtcgtc ctccaggacc tgttcctgtt cgacttcggg atgagcgtcg
      781 acgagaacgg ccggttcctc ggccacctga agtcgaccgg catccggccg aagttcggcg
      841 aacggctggc cgacaacggg atccggctcc ggccggagat cttcgcccag gagcccttcg
      901 cccggcgcat ggtcggggcc cgatgatcgc cgtcctcatg ctgctggcgg cggcgaccgc
      961 ggcgctgttc ggcgtggcgc tgacggccat cttcggccgg caggaggacg ggctggagca
     1021 gcggctcagc gcctatgccg gaaaggcgcc cgccgccgac gacgacggcg acgacgccgc
     1081 cagcccgacg ttcatcgaaa gcggcctcgt gcagcgggcg gtcgggctga cctccaagat
     1141 ggcggagcgc ggcgacctcc tggtgaaggt cgagcggctc ctggagcagg ccaacctgcc
     1201 gctgcggccg gccgaggcgc tgttcttcta cgccgccggc gtttcgctgc tgggcgtcgt
     1261 ggccctcacc gcggcgccga cactggccgt cggagtggtg ttcaccgcgc tgaccgccgc
     1321 cctccccgtc ctcgtcgtgc ggacgctgcg ccgccggcgc ctgaaggcct tcgaggccca
     1381 gctgcccgac acgctgaacc tgctggcggg atcgctgcgg gccggctact cgttcctgca
     1441 gggcctggag gccgtggtca aggagacctc ggagccgatg gcccgggagc tgcgccgggt
     1501 gctggccgag gcccggctcg gccggccgct ggaggacgcc ctcggcgacg tcgccgtccg
     1561 catcgagagc cgcgacttcg actggtcggt gctggccatc cgcatccagc gggaggtcgg
     1621 cgggaacctg gccgagctcc tccagacggt ggccgagacg atggtgcagc gcagccggct
     1681 gcggggcgag gtcaaggccc tcaccgccga aggccgcatt tccggcatca tcatgggcct
     1741 gctgccggtg gggctcgggc tgttcatgtt caccgcgtcg ccgacctaca tcgacgacct
     1801 gttcggttcc gtcaccggct gggccatggt ggtcggctcg gcggtcatgg cggtggccgg
     1861 gttcgcctgg atccagaaga tcatcaagat cgaggtctga cgcatgctct tctttgccgt
     1921 ggcggggatg ttcgccgccg tgttcgtggc caccgccgtg ttcctctccg ccggcgagga
     1981 acggcgcgac gtgcgggagg ccctgcgcaa cctggccgag tacgagctcc cgtccaacgt
     2041 gcgggagcag gagatgctga agtcgatcca ggaacgggtg gtggcgccgt tcgtgggccg
     2101 gctcggcggg ctgctcggcc acttcacgcc ggccggctac cgggaggcgg tgcgggacaa
     2161 gctggtggcc gccggttccc cggccgggct cgacgtcgac cggttcatga cgctcaaggt
     2221 cctcggcgcc gtgtcggtcg tcttctgg
//
LOCUS       DATGJT010000262         2524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_554158, whole genome shotgun sequence.
ACCESSION   DATGJT010000262 DATGJT010000000
VERSION     DATGJT010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_554158"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1355)
                     /gene="ilvB"
                     /locus_tag="VKX24_04465"
     CDS             complement(<1..1355)
                     /gene="ilvB"
                     /locus_tag="VKX24_04465"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HLJ07766.1"
                     /translation="MQMTGAQALIKSLEMEGTEVMFGLPGGAILPVYDPLLESSIRHI
                     LVRHEQGAGHMAEGYAHATGRPGVAMVTSGPAATNIVTPLCDAMLDSIPLVVVTGQVP
                     LSAIGTDAFQECDTTGITMPVTKHNWLIQSAADIPTVVREAFHVATTGRPGPVLVDIP
                     KDISNQTMEWYWPDAVDLPGFRAPQPPDPGLAREAARLILASERPVIYAGGGILKARA
                     AEALRRLAELTGIHVVTTLMARGAFPDDHPLALGMPGMHGNYTAVTAMQRSDLLIALG
                     SRFDDRVTGKVPAFAPGAKIIHVDIDPAELGKVRRADVGIAADCRAATLAITAAVEAE
                     LAETATVAPDRADWNATLAGWKAAHPLAYDQEEDGPLKPQFCIEQLRDHTPDDTIVVS
                     GVGQHQMWTSQYWKFNHPYTFVNSGGLGTMGFAVPAAVGAKVGKPDRMVWAIDGDGCF
                     Q"
     gene            complement(1550..>2524)
                     /locus_tag="VKX24_04470"
     CDS             complement(1550..>2524)
                     /locus_tag="VKX24_04470"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ07767.1"
                     /translation="MRRLLYVALCMVTTLAAFVVPSPAPAATRGVGLIRQRVEFTVKN
                     PTENGASRQIVGYRYDTFCTSPTAILLMHGLSYTKEAWDFPGYSVAQKLAEAGYAVFA
                     IDRLGYGESKLPNGYDVTFQGYGDMAHQIVDQIRSQGFGHVVLGGHSAGAGETEYEAG
                     MFGGVDAIMALGWHHRPSNQVGQDFFTGDIPRAMQDKYDYFLGTPQHRAEMFYNADAD
                     PAVVEADTNAAVLTPSGEILSIGIQPSRFVVGNVKVPVFLQFADGDRLFEPEYADMHK
                     GEFRASPSVKVDIVKDAGHTFMLTKNGRIGVDHMVDWLKSRPETPSCR"
BASE COUNT          362 a          814 c          951 g          397 t
ORIGIN      
        1 atctggaagc agccgtcgcc gtcgatggcc cacaccatcc ggtcgggctt gccgaccttg
       61 gcgccgaccg ccgccggcac ggcgaagccc atggtcccga gcccgccgga gttcacgaac
      121 gtgtaggggt ggttgaactt ccagtactgc gacgtccaca tctggtgctg gcccacgccg
      181 gagacgacga tcgtgtcgtc gggggtgtgg tcccgcagct gctcgatgca gaactgcggc
      241 ttgagcggcc cgtcctcctc ctggtcgtag gccaggggat gggcggcctt ccagccggcc
      301 agcgtggcgt tccagtcggc ccggtcgggg gcgaccgtgg ccgtctcggc cagctcggcc
      361 tccacggcgg cggtgatggc cagggtcgcc gcccggcagt cggcggcgat gccgacgtcg
      421 gcccggcgga ccttgccgag ctcggccggg tcgatgtcga cgtggatgat cttggccccg
      481 ggggcgaagg cggggacctt gccggtcacc cggtcgtcga agcgggagcc cagggcgatg
      541 aggaggtcgg agcgctgcat ggcggtgacc gcggtgtagt tgccgtgcat gccgggcatg
      601 ccgagcgcca gcggatggtc gtcggggaag gcgccccggg ccatcagcgt ggtgacgacg
      661 tggatgccgg tgagctcggc gaggcggcgc agcgcctccg ccgcccgggc cttgaggatg
      721 ccgccaccgg cgtagatcac cggccgctcg gaggccagga tcagccgggc cgcctcccgg
      781 gccaggccgg ggtcgggcgg ctggggcgcc cggaagccgg gcaggtcgac ggcgtcgggc
      841 cagtaccact ccatcgtctg gttgctgatg tccttgggga tgtcgacgag gacgggcccg
      901 ggccggccgg tggtggcgac gtggaaggcc tcccgcacga ccgtggggat gtcggcggcg
      961 ctctggatca gccagttgtg cttggtcacc ggcatggtga tgccggtggt gtcgcactcc
     1021 tggaaggcat cggtcccgat ggccgacagc ggtacctggc cggtcacgac cacgagggga
     1081 atggagtcga gcatggcgtc gcacagcggc gtgacgatgt tggtggccgc cgggccgctc
     1141 gtgaccatgg ccacgcccgg ccggccggtg gcgtgggcgt agccctcggc catgtggccg
     1201 gcgccctgct cgtgacggac gaggatgtgg cggatgctcg actccaggag cgggtcgtag
     1261 acgggcagga tggccccgcc ggggaggccg aacatgacct ccgtcccttc catctccagg
     1321 ctcttgatga gggcctgggc gccggtcatc tgcatggtcc tgatcccttc gtcgggctgg
     1381 tgtgtgttca gagcaatgaa aaaccccccg ctcgggtgcg gagggtcgga ggagcgcagc
     1441 gaggcgtcga gcgcctcggt gcgctacgga actacgagaa tgaggccggt gcggaacacg
     1501 gccctcagtc tacgccgagg gcggtgggat tccgcaaccg gaaccggact taccggcagg
     1561 aaggcgtctc gggccgcgac ttcagccagt cgaccatgtg gtcgacgccg atccgcccgt
     1621 tcttggtcag catgaaggtg tggccggcgt ccttgacgat gtcgaccttc accgacgggg
     1681 aggcgcggaa ctcgcccttg tgcatgtcgg cgtactccgg ctcgaacagc cggtcgccgt
     1741 cggcgaactg gaggaacacc ggcaccttga cgttgccgac gacgaagcgc gacggctgga
     1801 tcccgatcga gaggatctcc ccgctcgggg tgaggacggc ggcgttggtg tcggcctcca
     1861 ccacggccgg gtcggcgtcg gcgttgtaga acatctcggc ccggtgctgc ggcgtcccga
     1921 ggaagtagtc gtacttgtcc tgcatcgccc gggggatgtc accggtgaag aagtcctgcc
     1981 cgacctggtt ggacgggcgg tggtgccagc ccaaagccat gatggcgtcg acgccgccga
     2041 acatgccggc ctcgtactcc gtctcgccgg cgccggccga gtgcccgccg agcaccacgt
     2101 gcccgaaccc ctggctccgg atctggtcca cgatctggtg ggccatgtcg ccatagccct
     2161 ggaacgtcac gtcgtagccg ttgggcagct tggattcgcc gtagccgagc cggtcgatgg
     2221 cgaacacggc atagccggcc tcggccagct tctgggccac ggaatagccc gggaagtccc
     2281 acgcctcctt ggtgtaggac aggccgtgca tcagcaggat ggcggtaggc gacgtgcaga
     2341 acgtgtcgta gcggtacccg acgatctggc ggctggcgcc gttctccgtc gggttcttga
     2401 ccgtgaactc gacccgctgc ctgatgagcc cgacaccccg ggtggcggcc ggcgccgggc
     2461 tcggaaccac gaaggcggcg agcgtggtga ccatgcagag cgcgacgtag agcaaccggc
     2521 gcat
//
LOCUS       DATGJT010000263         5842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1485827, whole genome shotgun sequence.
ACCESSION   DATGJT010000263 DATGJT010000000
VERSION     DATGJT010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5842
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1485827"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2596)
                     /locus_tag="VKX24_04475"
     CDS             complement(<1..2596)
                     /locus_tag="VKX24_04475"
                     /inference="COORDINATES: protein motif:HMM:NF012907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HLJ07768.1"
                     /translation="MGLRSASGRLRLPSARAVPRLVVAGLLVGLLLAADRVDPVAAGV
                     AVAALVATGLLLRQRSRQGERRAVLALGGGATIAAVLVALSLPVYRSRPDPLIVNIGA
                     AGDQAAARAAGSTTTTRPLTPVTSAAGRRSVAGAPGAAQPAGTGGQEVLGFAASDYDD
                     TATGIDRDVAGLSTLAVTGATLGSHPGTVEIRPVTDGLVRAHLAGAEGLLVISNYDGK
                     DWNGGRVRALVTDKEARRRFVSAVSGAMARAPWDGVVLDFENLDGSVRDPLTSLVGHL
                     AEALRGRRVLVTVPAFTDPDSDDASPFDLVRLSAGGAGIVWMAYDQHDPTSDAGPVAP
                     MPWVRQSLATALRFVPPGQLLLGVAAYGYAWPAKGQGGDVTDLTVPEAAALAAAPGAH
                     VAWDPVQREWGGTLPDGRTLWYDDTRSIGERARLAADAHVGVALWRVGSEAPGALETL
                     ESQGLVPAKHTPQRPDRPVLATSGPGVVALTFDDGPDPTWTPRILDVLRREHVPATFF
                     VIGQQAERYPKLLRQELAEGHVIGDHTYSHPNLATLPPWRARLEINGAAWAVEGATGR
                     RPVLFRSPYGEGDAAPNSRKKGPDQLAADLGFHPVGWTDDTNDWQNHGPDTIVHAALG
                     QLSERTVILLHDGGGPRAQTVAALPRIIDALKAKGYLFTTADALDGATPEAYAVRKGI
                     VASVRGLMVVAAFRLQLALRRLLLWIAVATALGSLARLLLAAPLALIHRFRRRRPLLP
                     AGASLPPVTVIIPAYNEERVIAKNIAAIARLDPAPAEVIVVDDGSTDATAEVAVAAAR
                     VAFTRGSRPRGPAGVRFRLVRQENRGKAAALNHGLLLATTEVAVVIDADTVVSPGLLA
                     AFGPHFCDP"
     gene            complement(2686..4371)
                     /locus_tag="VKX24_04480"
     CDS             complement(2686..4371)
                     /locus_tag="VKX24_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07769.1"
                     /translation="MELVLDEAGVRPAVSVERRRPGRGWLPVAGAAVLAVALTLRVTS
                     RFGAGAEPDTVTYLAAAGHLRTGHGFADIGGEPLTLFPPLFPAAVAALEWLGLAGLSA
                     ARFLNAAMFGVLVVLAGVWARRISGSDTVAAVVAGVTAISTPMVSMASWALSEPVGIV
                     AEVACLMLLTEALRGTAGARPATGWAATGRAATGWAAAAGLAAALSCLTRYASVVLFP
                     VGIVVLLAGPGRRAARAALAATFAAVGAVPFGAWLVRNVIVAGNATGQGRGESALSPF
                     TSLKETLAAVGAWFLPGKTPVGVEAVAGAVLCAAVAVPLVAGAVAERRRADRAGGPGL
                     GPAGGSGLGPAGLALPAAAFVVLGVLSVAGFETAMAIDPPPRFLLPVFVPLLLGAAVV
                     VAGRSRSASSSRSGGRSGGRSVAVGLVLVVVAASLPRLVAYVERADRRGLLDYSTPRW
                     RSSAVLDYLRTHPVHGTVVSDDPYILNLRLGVLVFPTPARTYWQSNEPTTELPLFERR
                     AARAQSSGGLTVVWFPGSWQPYLYRLDDLERAVCLRLERHLADGDVLRSCPSG"
     gene            4514..>5842
                     /locus_tag="VKX24_04485"
     CDS             4514..>5842
                     /locus_tag="VKX24_04485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07770.1"
                     /translation="MLSRRVTAIASSLLVVTLLLVAARHAPDARAASADPVLLAAGDV
                     ASCLNPGAAATAKLLNDDPDAAVAMLGDGAYDLSRTGTGSDATAYQNCYTPTWGQAAI
                     KTRTRPAPGDNEYQGSPQAADYFAYFNGAGPCSGPASAPPTCPAGPDGLGYYSYDVGA
                     WHIVVLNAQCDPHAPGGLGNTALDGCGPDSAMGRWLAADLAAHPTACTLAYWHEPRFF
                     SFTSAGPLPPTGNTNYDTDPTMDAMWQILQDHKADVVLNGHRHVYERFPKLVLPTQSS
                     VGPGTPDPVNGIREFVVGTGGGPHHHFDPDPRTDPTQTIYEPNSEVHIQQTYGVLRLT
                     LHDGSYDWQFVGADGTSKGTVLDSGTDTCHGTPGATTTVTTGTTPSTTGQTTTTLAGS
                     HDPVPAVSHPAAPGYWMVDSGGAVYPFGAAGGHGNADPSPGATTVGLRPTP"
BASE COUNT          835 a         2245 c         2149 g          613 t
ORIGIN      
        1 tcggatcgca gaaatgcggc ccgaaggcgg cgagcaggcc gggcgagacg acggtgtcgg
       61 cgtcgatgac caccgccacc tcggtggtgg cgagcagcag cccgtggttg agggcggcgg
      121 ccttgccccg gttctcctgg cggacgagcc ggaagcggac gccggccggc ccgcgggggc
      181 gcgacccccg ggtgaaggcc acccgggcgg cggccacggc cacctcggcg gtggcgtcgg
      241 tcgacccgtc gtcgacgacg atcacctcgg ccggcgccgg gtcgagccgg gcgatggcgg
      301 cgatgttctt ggcgatcacc cgctcctcgt tgtaggcggg gatgatcacg gtgacgggcg
      361 ggagcgaggc cccggccggg agcagcggac gccggcgccg gaagcggtgg atcagggcca
      421 gcggggcggc cagcagcagc cgggccagcg acccgagcgc ggtggccacg gcgatccaca
      481 gcagcagccg gcgcagcgcc agctggaggc ggaaggccgc cacgaccatc agcccccgga
      541 cggaggccac gatccccttg cggacggcgt aggcctcggg agtggcgccg tcgagggcgt
      601 cggcggtggt gaagaggtag cccttggcct tgagggcgtc gatgatccgg ggcagggcgg
      661 ccaccgtctg ggcccggggg ccgccgccgt cgtggaggag gatgaccgtc cgctccgaca
      721 gctggcccag ggcggcgtgg acgatggtgt cggggccgtg gttctgccag tcgttggtgt
      781 cgtcggtcca gccgaccggg tggaacccca ggtcggcggc cagctggtcc ggccctttct
      841 tgcggctgtt gggagcggcg tcgccctcgc cgtagggcga ccggaacagc accggacgcc
      901 ggcccgtcgc cccttccacc gcccaggccg cgccgttgat ctccagccgg gcccgccagg
      961 gcggcagtgt ggccaggttc ggatgggagt aggtgtggtc gccgatcacg tggccctcgg
     1021 ccagctcctg gcgcagcagc ttcgggtacc gctccgcctg ctggccgatc acgaagaagg
     1081 tggccggcac gtgctcccgg cggaggacgt cgaggatgcg cggcgtccac gtcgggtcgg
     1141 gcccgtcgtc gaaggtcagc gccaccaccc ccgggcccga cgtggcgagg accggccggt
     1201 cgggccgctg cggggtgtgc ttggccggga cgagcccctg cgactccagc gtctccagcg
     1261 ccccgggggc ctcggagccg acccgccaca gggccacgcc gacgtgggcg tcggccgcca
     1321 ggcgggcccg ctccccgatc gaacgggtgt cgtcgtacca gagggtccgc ccgtcgggca
     1381 gcgtgccccc ccactcccgt tgcaccgggt cccaggcgac gtgggccccc ggcgcggcgg
     1441 ccagggccgc cgcctccggg acggtgaggt cggtgacgtc gccgccctgc cccttggccg
     1501 gccaggcgta gccgtaggcc gccacgccga ggaggagctg ccccggcggg acgaaccgca
     1561 gggccgtggc caggctctgg cggacccacg gcatcggcgc cacggggccg gcgtcgctgg
     1621 tcgggtcgtg ctggtcatag gccatccaga cgatgccggc gcccccggcc gagagccgga
     1681 ccaggtcgaa gggcgaggca tcgtcgctgt cggggtcggt gaaggcgggc accgtcacca
     1741 gcacccggcg tccccgcagc gcctcggcca gatggccgac gagcgaggtc agcgggtccc
     1801 gcacgctgcc gtcgaggttc tcgaagtcga ggacgacgcc gtcccacggc gcccgggcca
     1861 tggcgcccga cacggcggag acgaaccgac ggcgggcctc cttgtcggtg accagagccc
     1921 ggacccggcc gccgttccag tccttcccgt cgtagttgga gatcaccagc agcccctcgg
     1981 cgccggccag gtgcgcccgc acgagcccgt cggtcaccgg ccggatctcg acggtgccgg
     2041 ggtgcgaccc gagggtggcg ccggtgacgg ccagggtcga gagcccggcg acgtcccggt
     2101 cgatgcccgt ggccgtgtcg tcgtagtcgc tggcggcgaa cccgaggacc tcctggccgc
     2161 cggttcccgc cggctgggcg gcgccgggcg ctccggccac cgaccggcgc ccggcggccg
     2221 aggtcacggg cgtgagcggc cgggtggtgg tcgtcgaacc ggcggcccgc gccgccgcct
     2281 ggtccccggc agccccgatg ttgacgatca gcggatcggg ccggctccgg tagaccggga
     2341 gtgacagggc cacgaggacg gcggcgatgg tggccccgcc gccgagcgcc agaaccgccc
     2401 ggcgctcgcc ctggcgggag cgctggcgga ggaggagccc ggtggccacc agcgccgcca
     2461 ccgccacacc ggcggcgacg gggtcgacgc ggtcggcggc cagcagcagc ccgaccagca
     2521 gcccggccac gacgagccgg ggcaccgccc gggccgacgg caggcgcagg cggccggagg
     2581 cggagcgcag acccattgcg acaaaacgct acaaaagcct cacggggccc accttacgaa
     2641 ggaactcaag atttgtaagg tgccgcttca ggttgcgcgg cccgttcagc cggacgggca
     2701 gctccgcagc acgtcgccgt cggcgagatg ccgctcgagc cgcaggcaga ccgcccgctc
     2761 caggtcgtcc agccggtaga ggtagggctg ccacgacccg gggaaccaga cgaccgtgag
     2821 cccgcccgac gactgcgccc gggccgcccg ccgctcgaac agcgggagct ccgtggtcgg
     2881 ctcgttcgac tgccagtacg tccgggcggg ggtcggaaac accagcaccc cgagccgcag
     2941 gttcaggatg taggggtcgt cgctcaccac ggtcccgtgg acgggatggg tccggaggta
     3001 gtcgagcacg gccgacgacc gccaccgcgg ggtgctgtag tcgaggagcc cccggcggtc
     3061 ggcccgctcg acgtaggcga cgagccgggg cagcgaggcg gcgacgacca cgaggaccag
     3121 cccgacggcg accgaccggc cccccgaccg gccccccgac cgggacgagg acgcgctccg
     3181 gctccggccg gccacgacga ccgccgcccc gagcagcagc ggcacgaaca ccgggagcag
     3241 gaaccgcggc ggcgggtcga tggccatcgc cgtctcgaaa ccggccacgc tcagcacccc
     3301 gagcacgacg aaggcggccg ccggcagggc gagaccggcc gggccgagcc cggagccgcc
     3361 ggccgggccg agcccgggcc cgccggcccg gtcggcccgg cggcgctcgg cgacggcccc
     3421 cgccaccagc ggcacggcca cggcggcgca gagcaccgcg ccggccacgg cctccactcc
     3481 gaccggggtc ttccccggga ggaaccaggc tccgacggcg gccagggtct ccttcaggct
     3541 ggtgaagggc gacagtgccg actctccccg cccctggccg gtggcgttgc cggcgacgat
     3601 gacgttgcgg acgagccagg ccccgaaggg cacggccccg acggcggcga acgtcgccgc
     3661 cagcgcggcc cgggccgccc ggcgtcccgg cccggccagc aggaccacga tcccgaccgg
     3721 gaagagcacc accgaggcgt agcgggtgag gcaggacagc gccgcggcca ggccggcggc
     3781 ggcggcccag cccgtggcgg cccggccggt ggcggcccat ccggtggccg gccgcgcccc
     3841 ggccgtcccc cgcagggcct cggtcaggag catgaggcag gcgacctcgg ccacgatccc
     3901 gaccggctcg gacagcgccc aggaggccat ggagaccatc ggcgtggaga tcgccgtcac
     3961 gccggccacg acggcggcga ccgtgtcgga ccccgagatc cgccgggccc acaccccggc
     4021 cagcacgacc agcacaccga acatggcggc gttgagaaac cgggcggccg acaaccccgc
     4081 caggcccagc cactccagcg ccgccaccgc cgccgggaag agcggcggaa acaacgtcag
     4141 cggctcgccg ccgatgtcgg cgaagccgtg gccggtgcgg aggtggccgg cggcggcgag
     4201 gtaggtcacg gtgtcgggct ccgccccggc cccgaagcgg gacgtgaccc ggagcgtgag
     4261 ggccacggcg aggacggcgg ccccggccac cgggagccag ccgcgccccg gcctccgccg
     4321 ctccacgctc accgccggac ggaccccggc ttcgtccagg acaagctcca tacgcggccg
     4381 ccagtgtaag agcccgccgc cattgggccc ggggttgtga actgaccggg aaccgacggc
     4441 aaaaagcagg gattcagccc gctcccgcgg aagtcgtccc ctggaccctg cccacccccc
     4501 gtccgcagga gcagtgttgt ctcgacgcgt caccgccatc gcctcctcgc tgctcgtcgt
     4561 gacccttctg ctcgtcgcgg cccggcacgc gcccgacgcc cgggcggcgt cggccgaccc
     4621 ggtgctgctc gccgccggcg acgtcgcctc ctgcctgaac cccggcgcgg cggcgacggc
     4681 caagctgctc aacgacgacc ccgacgctgc ggtggccatg ctcggcgacg gcgcctacga
     4741 cctgagccgt acgggcacgg ggagtgacgc caccgcctat cagaactgct acaccccgac
     4801 atggggtcaa gcggcgatca agacccggac ccgtcccgcc cccggcgaca acgaatacca
     4861 gggcagcccg caggcggcgg actacttcgc ctacttcaac ggcgccgggc cctgctcagg
     4921 gccggcgtcc gccccgccga cgtgccccgc cggccccgac gggctcggct actacagcta
     4981 tgacgtcggc gcatggcaca tcgtggtgtt gaacgcccag tgcgaccccc acgccccggg
     5041 cgggctcggc aacaccgccc tcgacgggtg cggccccgac agcgcgatgg ggcggtggct
     5101 cgcggcggac ctcgccgccc atccgacggc ctgcaccctc gcctattggc acgaaccccg
     5161 cttcttctcc tttaccagcg ccggcccgct ccccccgacc ggcaacacca actacgacac
     5221 cgacccaacc atggacgcca tgtggcagat cctgcaggat cacaaggctg acgtcgtcct
     5281 caacggccat cgccacgtct acgaacgctt ccccaagctg gtgctgccca cccagtccag
     5341 cgtcgggccg ggcacccccg accccgtgaa cggcatccgg gagttcgtcg tcggcaccgg
     5401 tggcggaccg catcaccatt tcgaccccga tccccggacc gacccgacgc agacgatcta
     5461 cgaacccaac agcgaggtcc acatccagca gacgtacggg gtgctgcgcc tgacgctcca
     5521 cgacgggtcc tacgactggc agttcgtcgg cgccgacggc accagcaagg ggacggtgct
     5581 ggactccggg acggacacct gccacggcac gcccggggcg accaccacgg tgacgacggg
     5641 caccacacca tcgacgacgg gccagaccac caccaccctt gccgggtccc acgacccggt
     5701 ccccgccgtg tcccacccgg ccgctcccgg ttactggatg gtcgactcgg gtggtgccgt
     5761 ctatcccttc ggcgccgccg gcggccacgg aaacgccgac ccctcgcccg gcgccaccac
     5821 ggtggggctg cgtccgaccc cc
//
LOCUS       DATGJT010000264         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_865451, whole genome shotgun sequence.
ACCESSION   DATGJT010000264 DATGJT010000000
VERSION     DATGJT010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865451"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..1318
                     /locus_tag="VKX24_04490"
     CDS             101..1318
                     /locus_tag="VKX24_04490"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HLJ07771.1"
                     /translation="MLSEAKDTSELMVDLGYAALFFADPAMAEEVVDLEERLTALLHD
                     MRAICVLAARSPRDANEMAGVLGIVSAIERMGSAAVDVARIVTHRLGIPNALVADLAA
                     AEEVSHRVRVREDSAMAHRRLSDLELPVEVGMRVVALRRGKEWTIDPAGDEVLLPNDV
                     LITRGPGAGIAELRELAGAPEWRAGLLEEDTAITDLDRAVDVLVEMKNISEVAAGLAY
                     SAVLFKDQGLAAEVNHLEDRLDEMKERLEVWVLRGAADTLDPSALRGLLHLGQAAEEI
                     GDAAQAMVWLVEQGEEIHPILASAFGDSDEVIVRVPVAPGAPLDGKTLAEANLELETG
                     FYLLAVRRGGRYLYRPRGRVRLEAGDALIASGPDEGHGRLAELCGFRLVDDEETGECE
                     LVPAGPTRVSSRE"
     gene            1348..>2071
                     /gene="mca"
                     /locus_tag="VKX24_04495"
     CDS             1348..>2071
                     /gene="mca"
                     /locus_tag="VKX24_04495"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010126 - mycothiol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mycothiol conjugate amidase Mca"
                     /protein_id="HLJ07772.1"
                     /translation="MSNERLCLLQVHAHPDDEASKGAGTTARYAAEGVHTVLVTCTDG
                     AAGDILNPAADSPEVRADIRAVRLRELEDSVRILGYGSAHMLGYRDSGMPGTDANAHP
                     ESFAQAPLEEAVERLVRIVRAERPQVIVTYGDDHRGYPHPDHIRTHEISVAAFEAAGD
                     PERFPDAGPAFQPLKLYYTGWTRARLLALHNAFVARGEESPYVDWIAKWDPEMPEVPM
                     TTRIDVGDFLDQRRAALLAHRTQ"
BASE COUNT          298 a          767 c          745 g          261 t
ORIGIN      
        1 gtccccccga caacggcggc ggaagccgcc aaggaacgtc cgttggtatc gtggaaggac
       61 aacgagcgct atggacgacc gaccacgaaa tctcaaggcc atgctctcgg aggccaagga
      121 cacctccgag ctcatggttg acctggggta cgcagcgctg ttcttcgccg accccgccat
      181 ggccgaggag gtcgtcgacc tcgaggagcg gctgacggcg ctgctccacg acatgcgggc
      241 catctgcgtc ctggccgccc ggtcaccccg cgacgccaac gagatggccg gcgtcctcgg
      301 gatcgtgtcg gccatcgagc ggatgggctc ggcggcggtc gacgtcgccc ggatcgtcac
      361 ccaccggctg gggatcccca acgccctcgt cgccgacctg gccgccgccg aggaggtctc
      421 ccaccgggtg cgggtccggg aggactcggc catggcccac cggcgcctgt ccgacctcga
      481 gctgcccgtc gaggtgggca tgcgggtggt ggcgctgcgg cggggcaagg agtggacgat
      541 cgatcccgcc ggcgacgagg tcctgctccc caacgacgtc ctcatcaccc ggggcccggg
      601 cgccgggatc gccgagctgc gggagctggc cggggcgccg gagtggcggg ccgggctgct
      661 ggaggaggac acggccatca ccgacctcga ccgggccgtc gacgtcctcg tggagatgaa
      721 gaacatctcc gaggtcgccg ccggcctggc ctactcggcc gtcctgttca aggaccaggg
      781 cctggccgcc gaggtcaacc acctcgagga ccggctcgac gagatgaagg agcggctcga
      841 ggtctgggtg ctgcgggggg cggccgacac gctcgacccg tccgccctcc gggggctgct
      901 ccacctcggc caggccgccg aggagatcgg cgacgccgcc caggccatgg tctggctggt
      961 cgaacagggg gaggagatcc accccatcct ggcctcggcc ttcggggaca gcgacgaggt
     1021 catcgtccgg gtgccggtgg cgcccggggc cccgctcgac ggcaagacgc tggccgaggc
     1081 caacctcgag ctggagacgg gcttctacct cctggccgtg cgccggggcg ggcgctacct
     1141 ctaccggccg cggggccggg tgcggctcga ggcgggcgac gctctgatcg ccagcgggcc
     1201 cgacgagggc cacggccggc tggccgaact gtgcggcttc cgcctcgtcg acgacgagga
     1261 gacgggggag tgcgagctgg tcccggccgg gcccacccgg gtctccagcc gggaatgacg
     1321 ccccgcaggg cggcgttctc tcccgacgtg agcaacgaac ggctctgcct cctccaggtc
     1381 cacgcccatc ccgacgacga ggcgtcgaag ggcgcgggca ccaccgcccg ctacgccgcc
     1441 gagggcgtcc acaccgtgct ggtgacgtgc accgacggcg cggccggcga catcctcaac
     1501 ccggccgccg actcacccga ggtgcgggcc gacatccggg ccgtccgcct ccgggagctc
     1561 gaggactcgg tgcggatcct cggctacggc tcggcccaca tgctgggtta ccgcgactcc
     1621 ggcatgcccg gcaccgacgc caacgcccac ccggagtcgt tcgcccaggc gccgttggaa
     1681 gaggcggtgg agcggctggt gcggatcgtc cgggccgagc ggccgcaggt gatcgtcacc
     1741 tacggcgacg accaccgggg ctacccccac cccgaccaca tccgcaccca cgagatctcg
     1801 gtggcggcct tcgaggcggc gggcgacccg gagcgcttcc ccgacgccgg ccctgccttc
     1861 cagcccctca agctctatta caccggctgg acgagggccc gcctcctggc cctgcataac
     1921 gccttcgtgg cccgcgggga ggagagcccc tacgtcgact ggatcgccaa gtgggacccg
     1981 gagatgcccg aggtgccgat gaccacccgc atcgacgtcg gcgacttcct cgaccagcgc
     2041 cgggcggcgc tgctggccca ccggacccag g
//
LOCUS       DATGJT010000265         2664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_347540, whole genome shotgun sequence.
ACCESSION   DATGJT010000265 DATGJT010000000
VERSION     DATGJT010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347540"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1094
                     /locus_tag="VKX24_04500"
     CDS             <1..1094
                     /locus_tag="VKX24_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015745439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HLJ07773.1"
                     /translation="GLVLVAAGGLAAVTRATRTSAATGRTRTYYIAADPVDWDYAPSG
                     KNLLGPRFDATAGTYLEHGDDRIGHVDRKSIYRQYTDGTFKTLAPRPKEWEHLGVLGP
                     PIRAEVGDTVKVVFRNNTPFPASVHPHGLFYDKASEGADYDDGTSGADKADDAVPQGG
                     EHTYVWPVPDRAGPGPGDGSSVLWAYHSHTDEITDTNAGLIGPIIVTRRGMARADGSP
                     KDVDREVVTLYNIFDENVSPWLDWNIEHHTGKPKEVKKDDGEFKESNFKHSINGYLFG
                     NLPGLDFEKGEKVRWYVMGAGTETGLHTPHWHGNTVISGGMRMDMLDLLPMTMKVADM
                     VPDDPGTWLYHCHVNDHIAAGMSAFYRVS"
     gene            complement(1255..1815)
                     /locus_tag="VKX24_04505"
     CDS             complement(1255..1815)
                     /locus_tag="VKX24_04505"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07774.1"
                     /translation="MRITTAAARLMTATATGGFLLGLALLNPGAAHAIGGLCNGEPAS
                     HTWLDASGQPGPAVLEGTRGDDTIIGSDGDDTIDGRGGNDFICGAAGNDSITVGPGGN
                     SIVRGDTGDDDLSTVGTVHSVTLIGDDGNDTLEVGNTVAPSYLVGGPGDDVLIHDGGG
                     HVKMDGGDGFDDCLARGGDELVNCEY"
     gene            complement(2052..>2664)
                     /locus_tag="VKX24_04510"
     CDS             complement(2052..>2664)
                     /locus_tag="VKX24_04510"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HLJ07775.1"
                     /translation="LIAAYRAPAGVQLNLVLSAAVNVAVLAREHRRADGRAAAFLLGP
                     AVVAILPAAWIVRRVPRGPLTVLAGAVCLAAVAALATGRRFRRGTGAGGTIAAGLVSG
                     ALNVVAGISGPPVALFALNAAWPPDRLRPTMQLAFLTLNVLTLASLGLPRHLPPALLV
                     GFAGGLLAARLLGHRPSPQAVRRGMLLLAAAGSAVAIARGLTA"
BASE COUNT          422 a          933 c          957 g          352 t
ORIGIN      
        1 cgggactcgt cctcgtggcc gccggcgggc tggcggccgt gacccgggcg acccgcacga
       61 gcgccgccac cggccggacg cggacgtact acatcgccgc cgatccggtc gactgggact
      121 acgcgccctc ggggaagaac ctgctcggcc cccggttcga cgccaccgcc gggacgtacc
      181 tcgagcacgg cgacgaccgc atcggccacg tcgaccggaa gtcgatctac cggcagtaca
      241 ccgacggcac gttcaagacg ctggccccgc ggcccaagga atgggagcac ctcggcgtcc
      301 tcggcccgcc gatccgggcc gaggtcggcg acaccgtgaa ggtggtcttc cggaacaaca
      361 ccccgttccc ggccagcgtg cacccccacg gcctgttcta cgacaaggcc tccgagggcg
      421 ccgactacga cgacggcacc agcggggccg acaaggccga cgacgccgtc ccgcagggcg
      481 gcgagcacac ctacgtctgg ccggtccccg accgggccgg gcccggcccc ggcgacggca
      541 gctcggtgct gtgggcctac cactcccaca ccgacgagat caccgacacc aacgccggcc
      601 tcatcggccc gatcatcgtg acccggcggg gtatggcccg ggccgacggt tcgccgaagg
      661 acgtcgaccg cgaggtcgtc acgctctaca acatcttcga cgagaacgtg agcccctggc
      721 tcgactggaa catcgagcac cacaccggga agccgaagga agtgaagaag gacgacgggg
      781 agttcaagga gtcgaacttc aagcactcga tcaacggcta cctgttcggc aacctcccgg
      841 ggctggactt cgagaagggc gagaaggtcc gctggtacgt catgggcgcc ggcaccgaga
      901 cggggttgca cacgccgcac tggcacggca acaccgtcat ctccggtggg atgcgcatgg
      961 acatgctcga tctgctgccg atgacgatga aggtggcgga catggtgccc gacgaccccg
     1021 ggacctggct gtaccactgc cacgtcaacg accacatcgc ggcggggatg tcggcgttct
     1081 atcgggtttc gtagttcgtt ctccccgcgc cccatgtcgg ggggcggggc cccgaccggc
     1141 ggctccaaca ctgctcagtc gccggtggac ggtcgggggg cggggccccg accggcggct
     1201 ccgacactgc tcagtcgccg gcggccgggg ccccgccccc ctccactctt taggtcagta
     1261 ctcgcagttg acgagttcgt cgccgcctct tgccaggcag tcgtcgaagc cgtcgccgcc
     1321 gtccatcttc acgtggccgc caccgtcgtg gatgaggacg tcgtcgccgg gaccgccgac
     1381 gaggtaggac ggtgccacgg tgttgccgac ttcgagcgtg tcgttcccgt cgtcaccgat
     1441 gagggtgacg ctgtggacgg tccccacggt gctgaggtcg tcgtcgccgg tgtcgccccg
     1501 gacgatcgaa ttgccgccgg ggccgacggt gatggagtcg ttgccggcgg cgccgcagat
     1561 gaagtcgttg ccgccccggc cgtcgatggt gtcgtccccg tcgctgccga tgatggtgtc
     1621 gtcgcccctg gtgccctcga gcaccgccgg gccgggctgg cccgaggcgt cgagccaggt
     1681 gtggctggct ggttcaccgt tgcagagccc gccgatggcg tgggccgccc ccgggttgag
     1741 cagcgccagg ccaagcagga aaccgccggt ggcggtcgcc gtcatgagcc gcgccgcagc
     1801 tgtcgtaatt cgcatggttg cgtgcctcct gaatcggaca ataaacgccg gggtggaggc
     1861 gcctgcctat ggtcccagct gcttgtttgg catccccagc cccagaacca cagagtgcgc
     1921 taaccgcaga atagggtcaa gtcggggggc ctgaactcct ctgaagaacc gaggcggatt
     1981 atcaagatcc caacctcaga aagaccgtca aaagacggca cgcattttct gaaatttcct
     2041 gcgggactca ttcacgccgt caggccgcgg gcgatcgcca ccgcgctccc ggccgcggcc
     2101 agcagcagca ttcccctcct caccgcctgc ggcgacgggc ggtggccgag caggcgggcg
     2161 gcgagcaggc cgccggcgaa gcccaccagc agcgccggtg ggaggtggcg gggaaggccg
     2221 agggaggcca gcgtcaggac gttgagggtg aggaaggcca gctgcatcgt cgggcggagg
     2281 cggtcggggg gccaggcggc gttgagggcg aagagggcga cgggcgggcc gctgatcccg
     2341 gccacgacgt tcagggcgcc gctcaccagg ccggcggcga tggtgccgcc cgccccggtc
     2401 ccccgccgga accggcggcc ggtggccagg gcggcgacgg cggccaggca cacggcgccg
     2461 gcgaggacgg tcaacgggcc ccggggcact cggcgcacga tccaggcggc cggcaggatg
     2521 gccacgaccg ccggcccgag caggaatgcc gccgcccggc cgtcggcccg gcggtgctcc
     2581 cgggcgagga cggcgacgtt gaccgccgcc gacagcacca ggttgagctg gacgccggcc
     2641 ggggcccggt aggcggcgat gagg
//
LOCUS       DATGJT010000266         4338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_658202, whole genome shotgun sequence.
ACCESSION   DATGJT010000266 DATGJT010000000
VERSION     DATGJT010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4338
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658202"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VKX24_04515"
     CDS             <1..426
                     /locus_tag="VKX24_04515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07776.1"
                     /translation="VVAFAFTMLPAGLEEMHLRLSPNVVGGVGLLTGTYIGARGIGGA
                     ILDRLRERRENAALASAGIGTTVVLPPEGHEPIVIDTVPAERRPRSRTRVAAATGAGN
                     GPAEAELVGAPAGGSVGGLRSGGGLTLPPRPGGRLDGRR"
     gene            431..1303
                     /locus_tag="VKX24_04520"
     CDS             431..1303
                     /locus_tag="VKX24_04520"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07777.1"
                     /translation="MALTAFEAPELAEGQEAALEVFEKFIPEQAGEGVPLVGKEISKA
                     FGGIKALRDVPLIEVPAHSFVGLIGPNGAGKSTLFNVLNGFTTPDTGEIILFGQDVTR
                     KQPWDRAKLGMSRTFQANHIDLDLTTFDNLLAGAYQLIRGGLFAATFRSRGNYTDEQR
                     ARVAARAVGRLLGLEPVMPVMARSLDFAAQRRIEIGRSLMSGPRLLLLDEPTAGVDAH
                     EARELVALVKRMQVDLGLAVLLIEHYVAAVMENCNPIYVLDQGTLIAGGTPAEVARDP
                     KVRASYLGEGEHHA"
     gene            1296..2018
                     /locus_tag="VKX24_04525"
     CDS             1296..2018
                     /locus_tag="VKX24_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007518647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07778.1"
                     /translation="MLELHNVSTGYGRLPVLFGVNLRVEPGQMVGVLGPNGAGKSTLL
                     KTILGLLPVRQGGIVFRGRKVSHEPAHARFASGISLCPEGRRVFKNLSVRENLLAGAF
                     GQSKDVVAEQLAAVYAIFPRLDERKEQRAGSLSGGEQQMLAISRALMSRPRLLLVDEL
                     SMGLAPLVVESLLDTLRQLCDRGLSVIVVEQHASRLVGRADRGEVLEKGRIVFSGPVG
                     AAEHHMDETYMSEEMLAAAKGV"
     gene            2024..3496
                     /locus_tag="VKX24_04530"
     CDS             2024..3496
                     /locus_tag="VKX24_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07779.1"
                     /translation="MKKCFAAIMLAAMVLGAVPAHGAPADDDFFRLAGRRNWLSFADA
                     RPVSPFFGIPGELRPGAPFARSYLDASPGRSECYAALYYPDDVVEEGVLQTTGHYENK
                     TEARSNNPDVGRGVKQEVAPLGMAGPHAATDNPKRTECASEAASAVGPGEGQLLADGG
                     FARTKASFDGDKILTDEAVSRVIGISAGPIRIATLETRLKLEYHLDGEPVITYAMTIA
                     GLENAGQPVAGVGAQGIVLAGQKVAGRDVIDQFNSEVAKNGAALKDKAWSDYIQLVAP
                     SVQKDGDGGVHVAGPAVEVGQVNTFRAGQGGSHFGLRLGYASVYAILNSLESEVPDLG
                     APTETTPGTPSPLDSTPPPASSASAGPGSISAGSATPSAAGGGLLSGAGDMGAGLASA
                     ASPPGLGAGGGYGSTGPETGTTPAAPPDQSALPAAGSTLPGLGSLAAPRAGGVAAAQL
                     AAETRKAARNTANGLLGGILVMAGALIWVAGMAIFGRKGA"
     gene            3524..3952
                     /locus_tag="VKX24_04535"
     CDS             3524..3952
                     /locus_tag="VKX24_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07780.1"
                     /translation="MVANASAVQGFDFDRVIGADDAAEPRRRALPRQAMIGLALMAGG
                     LVALLITWLQIKDVQNIAAQIPYVASGGLLGVTLAVVGSVALFSTTKPAAGPVTVEEL
                     AAQLADLSQSVRWTGDAVEQIADYLNELAGQGEVESRTTR"
     gene            3964..>4338
                     /locus_tag="VKX24_04540"
     CDS             3964..>4338
                     /locus_tag="VKX24_04540"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07781.1"
                     /translation="MTATSPVTRPGERDDAPAETAPAGRVVIEGLVKSYGARQALRGV
                     DVRLDNGLTGLLGPNGAGKSTLMRCLAGIQSWDTGRVAVDGVDAERHPATLRRSVGFM
                     PERVSFPGEMRVAAYLGYVAAAK"
BASE COUNT          615 a         1569 c         1575 g          579 t
ORIGIN      
        1 gtcgtcgcct tcgccttcac gatgctgccg gccggcctcg aggagatgca cctgcggctc
       61 tcccccaacg tcgtcggcgg tgtcggcctg ctcaccggga cctacatcgg cgcccggggg
      121 atcggcggcg ccatcctcga ccggctccgg gagcggaggg agaacgccgc cttggcctcg
      181 gccgggatag gaaccaccgt ggtcctcccg cccgagggcc acgagccgat cgtcatcgac
      241 acggtcccgg ccgaacggcg gccgcggagc cgcacccggg tggcggccgc cacgggcgcc
      301 ggcaacggac ccgcggaggc cgagctggtc ggcgcaccgg ccggtgggag cgtcgggggc
      361 ctgcgcagcg gcggcgggct gacgctcccg ccccgcccgg gcggccggct ggacgggagg
      421 agataaggcc atggccctca ctgcattcga ggcgcccgag ctggccgaag gccaggaagc
      481 ggccctcgag gtcttcgaga agttcatccc cgagcaggcc ggcgagggcg tgccgctcgt
      541 cggcaaggag atctccaagg ccttcggcgg catcaaggct ctgcgggatg ttccgctgat
      601 cgaggttccg gcccacagct tcgtcgggct catcgggccg aacggcgcgg gcaagtcgac
      661 gttgttcaac gtcctcaacg gcttcacgac gcccgacacc ggcgagatca tcctgttcgg
      721 gcaggacgtc acccgcaagc agccctggga ccgggccaag ctggggatga gccggacgtt
      781 ccaggccaat cacatcgacc tcgacctgac gacgttcgac aacctgctgg ccggcgccta
      841 ccagctgatc cggggtggcc tgttcgccgc caccttccgg agccggggca actacaccga
      901 cgagcagcgg gcccgggtgg cggcccgggc ggtgggccgg ctgctgggcc tcgaaccggt
      961 gatgcccgtc atggcccggt cgctcgactt cgccgctcag cgccgcatcg agatcgggcg
     1021 cagcctcatg agcgggcccc ggctgctgct gctcgacgag ccgacggcgg gcgtcgacgc
     1081 ccacgaggcg agggagctcg tggcgctggt caagcgcatg caggtcgacc tcggcctcgc
     1141 cgtcctgctc atcgagcact acgtcgccgc cgtcatggag aactgcaacc cgatctacgt
     1201 actcgaccag ggaacgctga tcgccggcgg tacgccggcg gaggtggccc gggatccgaa
     1261 ggtgcgggcc tcgtacctcg gcgaggggga acaccatgct tgagctgcac aacgtctcca
     1321 ccggctacgg ccgcctgccc gtcctgttcg gcgtcaacct ccgggtcgag ccgggccaga
     1381 tggtcggcgt cctcggcccc aacggggcgg ggaagtccac gctgctcaag acgatcctcg
     1441 gcctgctgcc ggtgcgccag ggcgggatcg tcttccgggg ccgcaaggtg agccacgagc
     1501 cggcccacgc ccgcttcgcc tccggcatca gcctctgccc cgaaggccgg cgggtgttca
     1561 agaacctctc cgtccgggag aacctcttgg ccggcgcctt cggccagtcg aaggacgtcg
     1621 tggccgagca gctcgccgcg gtgtacgcca tcttcccccg gctcgacgag cgcaaggagc
     1681 agcgggcggg atcgctctcc ggcggcgagc agcagatgct ggccatcagc cgggcgctca
     1741 tgtcccggcc ccgcctgctg ctggtcgacg agctgtcgat gggcctggcg ccgctcgtcg
     1801 tcgagagcct gctcgacacg ctgcgccagc tgtgcgaccg gggcctgtcg gtcatcgtcg
     1861 tcgaacagca cgcctcccgc ctcgtcggcc gggccgaccg cggcgaggtg ctggagaagg
     1921 gccggatcgt cttctccggc ccggtcggcg ccgccgagca ccacatggac gagacctaca
     1981 tgagtgaaga aatgctggct gcggccaagg gggtgtagga ccgatgaaga agtgtttcgc
     2041 cgcaatcatg ttggcggcca tggtgctggg ggcggtcccg gcgcacggcg cgccggccga
     2101 cgacgacttc ttccgcctgg ccggccggcg gaactggctg tcgttcgccg acgcccggcc
     2161 ggtctcaccg ttcttcggca tccccggtga gctgcggccc ggagcgccgt tcgcccgttc
     2221 ctacctcgac gcctcgccgg gccgctccga gtgctacgcc gccctctact accccgacga
     2281 cgtcgtcgag gaaggcgtgc tgcagacgac cgggcactac gagaacaaga ccgaggcccg
     2341 gagcaacaac cccgacgtcg gccgcggcgt caagcaggag gtcgcgccgt tggggatggc
     2401 cggtccccac gccgccaccg acaaccccaa gcggacggag tgcgccagcg aggccgcttc
     2461 ggcggtcggc ccgggtgagg ggcagctcct ggccgacggc ggcttcgccc ggacgaaggc
     2521 gtccttcgac ggcgacaaga tcctcaccga cgaggcggtg tcccgggtca ttgggatcag
     2581 cgccggaccg atccggatcg ccacgctgga gacccggctc aagctcgagt accacctcga
     2641 cggcgagccc gtcatcacct acgccatgac gatcgccggc ctggagaacg ccggccagcc
     2701 cgtggccggg gtgggggccc agggcatcgt cctcgccggc cagaaggtgg ccggccggga
     2761 cgtcatcgac cagttcaaca gcgaggtggc caagaacggc gccgccctca aggacaaggc
     2821 ctggtccgac tacatccagc tggtcgcccc ttcggtgcag aaggacggcg atggcggtgt
     2881 ccacgtggcc ggtccggcgg tggaggtcgg ccaggtcaac acgttccggg ccggtcaggg
     2941 cggctcgcac ttcgggctgc gcctcggcta cgccagcgtc tacgccatcc tgaacagcct
     3001 ggagtcggaa gtgcccgacc tcggcgcccc gaccgagacg acgcccggta cgccgtcgcc
     3061 gctcgactcc acgccgcccc cggccagctc cgcctcggcc gggccgggct cgatctcggc
     3121 cggttcggca acgccgtccg ccgccggcgg tggcctgctg agcggcgcgg gcgacatggg
     3181 cgccggtctc gcctcggcgg cgtccccgcc cgggctcggc gcgggcggcg gctacggcag
     3241 cacggggccc gagaccggca ccactccggc ggcgccgccg gaccagtccg ccctcccggc
     3301 ggcggggtcg accctgccgg gtctgggatc actggccgcc cctcgggccg ggggagtggc
     3361 cgcggcccag ttggcggcgg agacccgcaa ggcggcccgc aacaccgcca acgggctgct
     3421 gggcgggatc ctggtcatgg ccggggcgct gatctgggtg gccggcatgg cgatctttgg
     3481 acgcaagggc gcgtaagcgc gcgacgcact gaaggagacg gagatggttg caaacgccag
     3541 tgccgtgcaa ggcttcgatt tcgaccgggt catcggagcc gatgacgccg ccgaaccccg
     3601 ccgtcgcgcc ctgccgcggc aggcgatgat cgggctggcc ctgatggccg gcgggctcgt
     3661 cgccctgctg atcacgtggc tccagatcaa ggacgtgcag aacatcgccg cccagatccc
     3721 ctacgtggcc agtggcgggc tgctcggcgt gacgctggcc gtggtgggct ccgtggcgct
     3781 gttctcgacc acgaagccgg cggccggccc cgtcacggtc gaggagctgg cggcccagct
     3841 cgccgatctg tcacagtcgg tcaggtggac cggcgacgcc gtcgagcaga tcgccgacta
     3901 cctgaacgag ctggcggggc agggcgaagt cgagtcccgc accacccgct gaccaccatc
     3961 gccatgaccg ccacttcccc ggtgacgcgc ccgggggagc gggacgacgc cccggcggag
     4021 acggcgcccg ccggacgcgt cgtgatcgaa ggcctggtga agagctacgg cgcccgccag
     4081 gccctccggg gcgtcgacgt ccggctcgac aacggcctca ccgggctgct cgggccgaac
     4141 ggcgcgggca agagcacgct catgcggtgc ctggccggga tccagtcgtg ggacaccggc
     4201 cgggtcgccg tcgacggcgt cgacgccgaa cggcacccgg cgacgttgcg ccgcagcgtc
     4261 gggttcatgc ccgagcgggt ctcgtttccc ggcgagatgc gggtcgccgc ctacctgggg
     4321 tacgtggcgg cggccaag
//
LOCUS       DATGJT010000267         2480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1280434, whole genome shotgun sequence.
ACCESSION   DATGJT010000267 DATGJT010000000
VERSION     DATGJT010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280434"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..2072
                     /locus_tag="VKX24_04545"
     CDS             231..2072
                     /locus_tag="VKX24_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011720616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HLJ07782.1"
                     /translation="MHLTSSAITAVDLSSPGRYLHWSIFTVSVANLVLIAVMVAIFGL
                     ALLLPFPHGRRVDGEAEVAAAPPAPLPEDPPDTASMWTARIRRRALGLLPPGKLLPDR
                     QPAYVASWVYVFGVASLVTLGIAIVSGFAIALGGTDWWHTNPVGHFFNSLHLWSVELF
                     MALLVIHLWGKFWMAAWRGRRTATWITGVVAFVASIVECFTGYLSQQNFDSQWISTNG
                     KDAINSTGLGGFFNLLNFGQMLLWHVVLIPIVLVAIVGAHVLLVRVRGVSHPLPPVRP
                     RGRAARRAAAVADAAEWRGPTRRYDIVKEGTIAGVIALVLVVLLAGILSSPDDPPVTV
                     ASWAKVAPADFLGTAASELAGTSETATYGPPYNTGTGNVQRLLWSWQTLIGVRQPIDA
                     AQSFVVSPLGTLARTDAPLRRALDRYLAAPASKQQAWAQAYLAAEAKVRFVGSRPVVP
                     AAHDGPVPVMISSELTLARSGALDADLLAQHPFYGTDFTKPLLFLEDGSYFSNLAEAD
                     HLTGAQWGVMNETGSYPGQPWLWLYTLWYQVPGLDNSANIDLIAIYLTGVATLLLLAV
                     PFIPGLRDIPRFVPVHRFIWRNPPAAGSPPEEPVSPSPEEPTAVPTS"
     gene            complement(2029..>2480)
                     /locus_tag="VKX24_04550"
     CDS             complement(2029..>2480)
                     /locus_tag="VKX24_04550"
                     /inference="COORDINATES: protein motif:HMM:NF021507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HLJ07783.1"
                     /translation="DVTSTVGVASVRQNLDLIVDNGQPVPGLNANDTTKWGYTLHNYV
                     YVWRSGVGVTADGALVYVGGPNMNITDLADVLSRAGAVRAMELDINTDWVNFSIYDPP
                     GRTPASAANGTELLSSMSGGPSRYFQPWWARDFITMSAPPSAPRAKG"
BASE COUNT          335 a          957 c          805 g          383 t
ORIGIN      
        1 aaaggctccg ctccccggtc gcgcaccgcc cgcacccccc ggggagctgg ccaactgcgc
       61 ccggacagcg ctgcgaccag cccgttcggg accgcgggcc gggagaacgt ctgggcagcc
      121 accacgacgg tgttgccaaa gaaggacctt tggccccttc aaaagcgcgt cgtgctccgg
      181 caagttgtcc ggagacggcc gcgggccgtg aaagaggggg agacctcgcg atgcacctaa
      241 ccagctcggc catcaccgcc gtcgacctca gcagcccggg tcgctacctg cactggtcga
      301 tcttcaccgt gtcggtggcc aacctcgtcc tcatcgcggt gatggtggcg atcttcgggc
      361 tcgccctcct cctgccgttc ccccacggcc gccgggtcga cggggaggcc gaggtagcgg
      421 ccgccccacc ggcgcccctg cccgaggacc cgcccgacac cgcgtccatg tggacggcgc
      481 gcatccgccg gcgggcgctc gggctcctcc cgcccggcaa gctgctcccg gaccgccagc
      541 cggcgtacgt cgcctcctgg gtctacgtct tcggcgtggc cagcctggtc accctcggca
      601 tcgccatcgt ctcgggcttc gccatcgccc tcggcgggac cgactggtgg cacaccaacc
      661 cggtcgggca cttcttcaac agcctccacc tgtggagcgt cgagctcttc atggccctcc
      721 tcgtcatcca cctctggggc aagttctgga tggccgcctg gcgcggccgt cgcaccgcca
      781 cctggatcac gggcgtcgtc gcgttcgtgg cctcgatcgt cgagtgcttc accggctacc
      841 tgtcccagca gaacttcgac tcgcagtgga tctcgaccaa cggcaaggac gcgatcaact
      901 cgaccggcct cggcggcttc ttcaacctct tgaacttcgg ccagatgctg ctctggcacg
      961 tcgtcctcat cccgatcgtg ctggtggcca tcgtcggggc ccacgtcctg ctggtcaggg
     1021 tccgcggtgt gtcacacccg ctgccccccg tccggcctcg cggccgggcg gcccggcgcg
     1081 cggcggccgt cgccgacgcc gccgagtggc gcggcccgac ccgccgctac gacatcgtga
     1141 aggaggggac gatcgccggc gtcatcgccc tcgtgctcgt ggtgctgctc gccgggatcc
     1201 tgtcctcgcc cgacgatccg ccggtgacgg tcgcctcctg ggcgaaggta gcgccggccg
     1261 acttcctggg cacggcggcg agcgagctgg ccgggaccag cgagacggcc acctacgggc
     1321 ccccctacaa cacgggcacc ggcaacgtgc agcgcctgct gtggtcgtgg cagaccctga
     1381 tcggggtccg ccagccgatc gacgccgccc agagcttcgt cgtgtccccg ctcggcaccc
     1441 tggcccgcac cgacgccccg ctgcgccggg ccctcgaccg ctacctggcg gcgccggcgt
     1501 cgaagcagca ggcctgggcc caggcctacc tggccgcgga ggccaaggtg cgcttcgtgg
     1561 gcagccgccc cgtcgtgcca gccgcccacg acgggccggt gccggtcatg atctcgagcg
     1621 agctcaccct ggcgcgctcc ggcgccctcg acgccgacct gctcgcccag catcccttct
     1681 acggcaccga cttcaccaag cccctcctct tcctcgagga cgggagctac ttctccaacc
     1741 tggccgaggc agaccacctg accggcgccc agtggggggt catgaacgag accggcagct
     1801 accccggcca gccctggctg tggctctaca ccctctggta ccaggtgccc gggctcgaca
     1861 actcggccaa catcgacctc atcgccatct acctgaccgg ggtggccacc ctcctgctcc
     1921 tcgccgtccc gttcatcccg gggctgcggg acatcccccg gttcgtcccg gtccaccgct
     1981 tcatctggcg gaacccgccc gccgcgggct ccccgcccga ggagccggtc agcccttcgc
     2041 ccgaggagcc gacggcggtg ccgacatcgt gatgaagtcg cgcgcccacc acggctggaa
     2101 gtagcgcgac gggccgccgg acatcgagga gaggagctcg gtgccgttgg ccgcgctggc
     2161 cggcgtccgc cccggcgggt cgtagatgct gaagttcacc cagtcggtgt tgatgtcgag
     2221 ctccatggcc cgcaccgcac cggcacggga gagcacgtca gccaggtctg tgatgttcat
     2281 gttcggtccg ccgacgtaga cgagggcgcc gtcggcggtc acgcccacgc cggaacgcca
     2341 cacgtagacg tagttatgga gggtgtagcc ccacttggtc gtgtcgttcg cgttcagtcc
     2401 agggacgggc tgcccgttgt cgacgatcag gtcgaggttc tggcggaccg acgcgacgcc
     2461 cacagtcgag gtgacgtccc
//
LOCUS       DATGJT010000268         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_243168, whole genome shotgun sequence.
ACCESSION   DATGJT010000268 DATGJT010000000
VERSION     DATGJT010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243168"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..1237
                     /locus_tag="VKX24_04555"
     CDS             200..1237
                     /locus_tag="VKX24_04555"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HLJ07784.1"
                     /translation="MEFRIRPTSRRVGAGLLLALVAGGGLAACSSGAPANSITLYNGQ
                     HVQTTDALVAAFEHQTGISVRIHSDDESVLADQIVTEGSNSPADVIFTENTPALEFLQ
                     SKHLLAALGAGAGATTQPRYDSDDGDWVGISARVSVLVYNPSLIKPSALPTSVLRLAD
                     PRYRGLLALAPGETDFQPIVTSVLRAEGKAATLRWLGGLKANSAGHLYPDNETITSEV
                     NSGQVAMGVINQYYWYRLRSQIGARAMHSAITTFAPRDPGYVIDVSGAGVLRASTHRA
                     DATRFVQFLASRAAQEIIAGSDSYEYPIDAGVTRTGETPFAELRPAPVSLAELGDGST
                     AVALLQQVQLL"
     gene            1234..1737
                     /locus_tag="VKX24_04560"
     CDS             1234..1737
                     /locus_tag="VKX24_04560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07785.1"
                     /translation="MSPLGQRSRRSVDRFEFSPDDLSRLLEVTAWLAAHRDGWLNLLP
                     GVESSADPVEAPGLFSIFGSSAQPVSMCTWMPPGRSRHALDEVTVGIMHPRGKKILPE
                     LAAAGLGLAPTWRVWSDHPRRGLVVKIPASAPDAEVLGWAVAAGGQLCDLPLTGSWQA
                     EVFQPIR"
     gene            1850..>2159
                     /locus_tag="VKX24_04565"
     CDS             1850..>2159
                     /locus_tag="VKX24_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020540099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HLJ07786.1"
                     /translation="MTSETLTLPVLPLRSGVMLPGMVFTIALETDEARAAAEVVGTSG
                     GRLLLVPHIDGRYGSVGVVAEVVERGELPGGLPALAVSGERRARLGTGVPGTGAALWV
                     E"
BASE COUNT          281 a          799 c          764 g          315 t
ORIGIN      
        1 cggtgaccgc gctgcgaacg acgccgaatc gacccagccg accagtgcgc atctgtcctc
       61 ccccgatggt gggcccaacc ccccgggccc agccgggccc aatgcccggc ctcactgccg
      121 tgggaacgat accgggccga ggggtcgatc gtcgggtcga cttgccgcgc tcgtcttagg
      181 cattcctaag ctcataaaga tggagttccg aatccgaccg acgtcccgac gggtcggtgc
      241 cgggctcctc ctcgcgctcg tcgcgggggg tgggctggct gcgtgctcct cgggcgcgcc
      301 ggccaactcg atcaccctct acaacggcca gcacgtgcag accaccgacg ccctggtggc
      361 ggcgttcgag caccagaccg gcatcagcgt gcggatccac tccgacgacg agtcggtcct
      421 ggccgaccag atcgtcaccg aggggtccaa ctcgccggcc gacgtgatct tcaccgagaa
      481 caccccggcg ctcgagttcc tccagtccaa gcacctgctc gccgcgctcg gggcgggtgc
      541 cggggcgacc acccagcccc gctacgactc ggacgatggc gactgggtcg ggatctcggc
      601 ccgggtgagc gtcctcgtct acaacccctc gctcatcaag ccgtcggccc tcccgacctc
      661 ggtccttcgg ctcgccgacc cccgctaccg cgggttgttg gcgctcgccc cgggcgagac
      721 cgacttccag ccgatcgtga cctcggtcct gcgggccgag ggcaaggcgg cgacgctgcg
      781 ctggctcggg ggcctgaagg ccaactcggc cggccacctc taccccgaca acgagacgat
      841 cacctcggag gtcaactccg ggcaggtcgc catgggggtg atcaaccagt actactggta
      901 ccggctgcgg tcccagatcg gggctcgggc gatgcactcg gcgatcacca ccttcgcccc
      961 gcgcgatcct gggtacgtga tcgacgtctc gggggccggc gtgctgaggg cgagcacgca
     1021 ccgggccgac gccacccggt tcgtgcagtt cctggcgagc cgggccgccc aggagatcat
     1081 cgccgggagc gacagctacg agtacccgat cgacgccggg gtgacgagga cgggggagac
     1141 gccgttcgcc gagctgcgcc cggcgccggt gtcgctggcc gagctcggcg acggctcgac
     1201 ggcggtggcg ctcctccagc aggtccagct cctgtgagcc ccctcgggca gcgctcccgc
     1261 cgcagcgtcg accgcttcga gttctcgccc gacgacctct cccggttgct cgaggtgacg
     1321 gcgtggctgg ccgcgcaccg ggacggctgg ctgaacctcc tccccggggt ggagagctcc
     1381 gccgacccgg tcgaggcccc ggggctcttc tccatcttcg ggtcgagcgc ccagccggtc
     1441 tcgatgtgca cgtggatgcc gcccggacgg agccgccacg ccctcgacga ggtgaccgtc
     1501 ggcatcatgc acccccgggg gaagaagatc cttcccgagc tcgcggcggc cggcctcggt
     1561 ttggccccga cctggcgggt ctggtccgac catccgaggc gggggctcgt ggtgaagatc
     1621 ccggccagcg cccccgacgc cgaggtgctc ggctgggcgg tggcggccgg cggccagctc
     1681 tgcgatctgc cgctcaccgg ctcctggcag gccgaggtct tccaaccgat ccgctgagcc
     1741 cgctcctccc cacccctgga gccccggaat agaggagcgc gcgggcggcg ttggtccatt
     1801 cctagggtga acctcagttc cgcttctggg gcgcccgatt ggaggacacg tgaccagcga
     1861 gaccctgacc cttccggtgc tgcccctgcg ctccggcgtg atgctccccg ggatggtgtt
     1921 cacgatcgca ctcgagaccg acgaggcgcg ggccgcggcc gaggtggtgg ggacctccgg
     1981 cggccgcctg ctgctcgtgc cccacatcga cgggcggtac ggctcggtcg gcgtggtggc
     2041 cgaggtggtc gagcggggcg agctgcccgg gggcctcccg gccctggccg tgagcgggga
     2101 gcgccgggcc cggctcggca ccggggtgcc ggggaccggc gccgcgctgt gggtcgagg
//
LOCUS       DATGJT010000269         2363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1073020, whole genome shotgun sequence.
ACCESSION   DATGJT010000269 DATGJT010000000
VERSION     DATGJT010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073020"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..497)
                     /locus_tag="VKX24_04570"
     CDS             complement(<1..497)
                     /locus_tag="VKX24_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012875275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07787.1"
                     /translation="MARDPDNPYGIRFWGSERPMSFLNPYRWRGELNEVERWKQDRHP
                     LEAARDVIAKYAVEGPAAIYSTPGEVERLKWVGVYPQRQGGDAFMLRIKIPGGRLQAE
                     QLREIGVVADAFAEGPDDTELFGNRYADITTRQDIQLHWIRIEDVPRIWQRLWDVGIT
                     TLQACG"
     gene            complement(497..1177)
                     /locus_tag="VKX24_04575"
     CDS             complement(497..1177)
                     /locus_tag="VKX24_04575"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF002537.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HLJ07788.1"
                     /translation="MNDLTTAPTPALLEELESVNARFEREPATASIDWALERFGGSVV
                     LACSFQDLVIVDLVRAREPDIEVVFLDTGAHFEQTLDLVERARARYRLNLVVTSPAEG
                     AEEWPCGSARCCEFRKVEPLRRVLAGRAAWITGLKRADSAARADIPIVGYDDAFGLVK
                     VNPLATWTDDDIVSYEADHDLLVHPLMRSGYRSIGCAPTTRPVADGEDPRAGRWAGSD
                     KTECGLHG"
     gene            1325..2281
                     /gene="cysD"
                     /locus_tag="VKX24_04580"
     CDS             1325..2281
                     /gene="cysD"
                     /locus_tag="VKX24_04580"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013828220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HLJ07789.1"
                     /translation="MTTIETAAAAPRPDQAVRPRRRADHLDLLESHAIFVMREVAAES
                     ERPVLLFSGGKDSAVLLHLALKAFRPGPFPFPIMHVDTGHNFDEVIAYRDAFVAQLGE
                     ELIVASVQDSIDRGRVADPGPGQSRNRLQAVTLLDAINEHRFDAAIGGARRDEDKARA
                     KERVLSFRDAFGQWDPKRQRPELWQLYQGRVLSGEHVRAFPLSDWTELDIWRYIARER
                     IELASIYFAHRRPVVERDGMLLALGEWVTPREGEQVESASVRFRTVGDATCTGAVRSD
                     AATLEEIIAEVATARTSERGATRADDRFSETAMEDRKREGYF"
BASE COUNT          339 a          854 c          839 g          331 t
ORIGIN      
        1 ccgcaggcct ggagggtggt gatcccgacg tcccagaggc gctgccagat ccgcggcacg
       61 tcctcgatgc ggatccagtg cagctggatg tcctgacggg tggtgatatc ggcgtagcgg
      121 ttgccgaaga gctcggtgtc gtcgggcccc tcggcgaagg cgtcggccac caccccgatc
      181 tcgcgcagct gctcggcctg gagccggcca ccggggatct tgatccgtag catgaaagcg
      241 tcgccgccct ggcgctgggg gtagacgccg acccacttca gccgctcgac ctcaccgggg
      301 gtggagtaga tcgcggccgg accctcgacg gcgtacttgg cgatgacgtc gcgggccgcc
      361 tcgagggggt ggcggtcctg cttccagcgc tcgacctcgt tcagctcccc ccgccaccgg
      421 taggggttga ggaacgacat cggacgctcg ctcccccaga agcggatccc gtagggattg
      481 tcgggatcgc gggccatcag ccgtggagcc cgcactcggt cttgtcggac cccgcccacc
      541 ggccggcccg ggggtcctcg ccgtcggcga ccggccgggt ggtcggagca cagccgatgg
      601 agcggtaccc gctccgcatc aacgggtgga ccaagaggtc gtggtcggcc tcgtaagaga
      661 cgatgtcgtc gtcggtccag gtggcgagcg ggttgacctt gaccaggccg aaggcgtcgt
      721 cgtagcccac gatcgggatg tcggcccgtg cggccgagtc ggcgcgcttc agccccgtga
      781 tccacgccgc ccggccggcg agcacccggc gcaacggctc caccttgcgg aactcgcagc
      841 accgggcgga cccgcagggc cactcctcgg ccccctcggc cggcgaggtc acgacgaggt
      901 tcaggcggta gcgggcgcgg gcccgctcga cgaggtcgag ggtctgctcg aagtgggccc
      961 cggtgtccag gaagacgacc tcgatgtccg gctcccgggc ccggaccagg tccacgatca
     1021 cgaggtcctg gaaggagcag gcgaggacca ccgagccacc gaagcgctcg agcgcccagt
     1081 cgatcgaagc ggtcgccggc tcccgctcga agcgcgcgtt gaccgactcg agctcctcga
     1141 gcagcgccgg ggtcggcgca gtggtcaggt cgttcatggc ggcccctccg gaggcacccc
     1201 gacctggcgc tctgcggtcg tgtggccagg ccggcgccca gacttgtccg ggccctctgg
     1261 ggggactata catgacctac taggtcatgt tttcaagcga ctcctccgag gccccgccga
     1321 cccgatgacg acgatcgaaa ccgccgccgc agccccccgc ccggaccagg ccgtccgccc
     1381 ccggcggcgg gccgaccacc tcgacctgct cgagtcccac gccatcttcg tgatgcggga
     1441 ggtggcggcc gagtccgaac ggccggtcct cctcttcagc ggcgggaagg actcggcggt
     1501 gctcctgcac ctggccctca aggccttccg cccgggccca ttcccgttcc cgatcatgca
     1561 cgtggacacc ggccacaact tcgacgaggt catcgcctac cgggacgcct tcgtggccca
     1621 gctcggcgag gagttgatcg tggcgagcgt ccaggactcg atcgaccgcg ggcgggtggc
     1681 cgacccgggg ccgggccagt cccgcaaccg cctccaggcg gtgaccctgc tcgacgccat
     1741 caacgagcac cgcttcgacg ccgccatcgg aggggcccgc cgggacgagg acaaggcccg
     1801 ggccaaggag cgggtgctga gcttccgcga cgccttcggc caatgggacc cgaagcgcca
     1861 gcggcccgag ctctggcagc tgtaccaggg ccgggtcctc tcgggcgagc acgtccgggc
     1921 gttcccgctc tcggactgga ccgagctcga catctggcgc tacatcgccc gcgagcgcat
     1981 cgagctcgcc tcgatctact tcgcccaccg tcggccggtc gtcgagcggg acgggatgct
     2041 gctcgcgctc ggcgagtggg tcacgccgcg cgagggcgaa caggtcgagt cggcgagcgt
     2101 ccggttccgc accgtcggcg acgccacctg caccggcgct gtccgctccg acgcggcgac
     2161 gctcgaggag atcatcgccg aggtcgcgac cgcgcggacc tccgagcgcg gcgcgacgcg
     2221 cgccgacgac cggttctcgg agacggcgat ggaagaccgg aagcgcgaag ggtatttcta
     2281 ggccgtggcg ccgctggcgg cgcccggcgc gtcgagcatg accgacggca ccgggatcga
     2341 cctgttgcgc ttctgcgcca tcg
//
LOCUS       DATGJT010000270         3745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1280590, whole genome shotgun sequence.
ACCESSION   DATGJT010000270 DATGJT010000000
VERSION     DATGJT010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3745
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280590"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VKX24_04585"
     CDS             <1..228
                     /locus_tag="VKX24_04585"
                     /inference="COORDINATES: protein motif:HMM:NF037832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HLJ07790.1"
                     /translation="LKTDGRFLITLDKGFGDIRAYPPGTHPGILVLRLADESPVAVRQ
                     AVSEVLDHHRLDGLDGTVTVFHRGRLRIRLP"
     gene            908..1366
                     /locus_tag="VKX24_04590"
     CDS             908..1366
                     /locus_tag="VKX24_04590"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ07791.1"
                     /translation="MTTSVSSPGRRGSDRHGAARPGGRRQRRDPGRLCRRIGAVDGFD
                     VAAETSTGQEAVAVVEGRYDLDVVVVAYQMPGMTVVAAAAALLLRRPGLPIVLCTATP
                     TNDIVAAAEAVGIAACVDKTDIRQLPDILRRLAAAHLPSAAAEDRRAADD"
     gene            complement(1635..1799)
                     /locus_tag="VKX24_04595"
     CDS             complement(1635..1799)
                     /locus_tag="VKX24_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07792.1"
                     /translation="MIAIIGVYRTFGLNPVTAFWAAYVFTRSLGASIGDYLTQSHHDG
                     GLDCWSSPDP"
     gene            complement(1893..2288)
                     /locus_tag="VKX24_04600"
     CDS             complement(1893..2288)
                     /locus_tag="VKX24_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07793.1"
                     /translation="MALEDTEAATERARDHVADHAGIERLHIEDHARIAEEHLADHQA
                     LSSRLVDEHSELADRHIAEREKASGSTPAGKARVSSRHAAQHAWLDLRHAGRLTWMET
                     RHATERIVLDLRHATQLAAQERRHATTAR"
     gene            complement(2611..2937)
                     /locus_tag="VKX24_04605"
     CDS             complement(2611..2937)
                     /locus_tag="VKX24_04605"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003919576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HLJ07794.1"
                     /translation="MRRGELWTAAGGRRYAGKPRPVLILQDDRFGATDSVTICPLTSD
                     PTEIPLLRIPLPAGPGTGLAKPSRIMVDKVTTMPRATLGHYVGTVTDTDMLALGRALV
                     VFLGLA"
     gene            complement(2934..3179)
                     /locus_tag="VKX24_04610"
     CDS             complement(2934..3179)
                     /locus_tag="VKX24_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003919577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin MazE family protein"
                     /protein_id="HLJ07795.1"
                     /translation="MERESPTVRERVAAYRARMRRQGMRPVQIWVPDVRAPGFAAEAH
                     RQSALAAASDHAAHDQAFVDAISWFGEEDRTEDDAGE"
BASE COUNT          475 a         1309 c         1370 g          591 t
ORIGIN      
        1 ctcaagaccg acgggcggtt cctgatcact ctcgacaagg gcttcgggga catccgggcc
       61 tacccgcccg gcacccatcc cgggatcctc gttttgcgcc ttgctgacga atctcccgtc
      121 gcggtccgcc aggccgtctc cgaggtcctc gaccatcacc gcctcgacgg cctcgacggc
      181 accgtcaccg tcttccaccg cggccgactc cgcatccggc ttccctgacc ccacccgcgg
      241 ccgggccggt catgaccgtc cgctcggcct ggcggccgtc cccgaagccc aggcgctcca
      301 gggcgggata cggagccgct ctgggacacg ccccaaaggg gtgaccgacc gccgtgtcga
      361 agtccctccg gggggatctt gctcatgctc gtcggcacgc gctcatcgaa cgttgtcctg
      421 cgccgtccgc tggaaccggc ccggcccggt tcggtccgcc gtcggcccgt ggcgtcgctg
      481 gtcgtccggc gccgccagcg acgcccgccg cgctgaggag tcgaattcgg ctggccgctc
      541 ccccggctac tgcggattca agcgaccgcg gccagcgcct cgggtgggta gggccgcatc
      601 cggaccggct cggccgctct gagagcttcg gccgccgccc gtagggtgcc ggccgcgggc
      661 ggggacggcg aagtagatca cgtcgccgtg gcgggccagc aggccccgca ggatctcttc
      721 gacccggcct ttggtcttgc gggggagttc gacctcgatg gcgctgaggc cggtcggccc
      781 gtctggcgcc gtcgacagga cgaccgtcgg cgaggtcggg ggttcgtcct atggtctgta
      841 gaggggaacg gcgttcggcc tgccggttcg actccggggg tcggctgccc cgatcggcgg
      901 tcgcggggtg accacctccg tttcctcgcc cgggcggcgg ggatccgacc ggcatggcgc
      961 tgcgcgtccc ggtggtcgac gacaacgacg agatccgggc cggctgtgcc gccgaatcgg
     1021 cgccgtcgac gggttcgacg tggcggccga gacgtcaacc ggccaggagg ccgtggccgt
     1081 ggtcgagggg cgctacgacc tcgatgtggt cgtagtcgcc taccagatgc cgggcatgac
     1141 cgtcgtggcc gccgccgccg ccctcctcct gcgccggccg gggctgccca tcgtgttgtg
     1201 caccgccacc ccgaccaacg acatcgtggc cgccgccgaa gcggtcggaa tcgccgcctg
     1261 cgtcgacaag accgacatcc ggcaactgcc cgacatcctc cgccgactcg ccgctgccca
     1321 tcttccgtcg gctgccgcgg aggatcgccg cgctgcggac gactgatact gccggtcagc
     1381 ggccgaggtc gcgaatcacg gcatacaggg cgaatctccg atggggtctt gcccaacagt
     1441 gcaccgtcgc gtttaggtgt ccctgcctat ccctgttccc ccaaaggggc agcgtccccg
     1501 ggtggccctc ccggtgcggg cgtggtggca acagccgcat cctgagggcg agggaagcag
     1561 ccccgctccc tcgccctccc ttcttcggct tcgccgaggg ctcgacgagc ccgacacgaa
     1621 ggttgtcatc atcgctacgg atccggtgac gaccagcagt ccagtccgcc gtcgtggtgc
     1681 gactgggtga ggtagtcgcc gatggaggcg ccgagggagc gggtgaagac gtaggccgcc
     1741 cagaaggcag tgaccgggtt gaggccgaag gtgcggtaga cgccgatgat ggcgatcacg
     1801 gcgccgaaca ggagggccga tttccaggtt gttgggcccg gcgggcgagc cgcccctggc
     1861 tccggggccc tggcggttca gggcccccgg ggtcagcggg ccgtggtggc gtggcggcgt
     1921 tcctgagcgg cgagctgggt agcgtggcgg aggtcgagca cgatccgttc cgtggcgtgg
     1981 cgggtttcca tccaggtcag ccggccggcg tggcgcaggt ccagccaggc gtgttgggcg
     2041 gcgtgcctgc tgctcaccct ggccttgccg gccggggtgg agccggaggc cttctcccgt
     2101 tcggcgatgt gccggtcggc aagctcgctg tgctcgtcga cgaggcggct cgacagcgcc
     2161 tggtggtcgg ccaggtgctc ttcggctatg cgggcatggt cttcgatgtg aagccgctca
     2221 atgccggcgt ggtcggcgac atgatcccga gcccgttccg tcgccgcttc cgtgtcttcc
     2281 agcgccatga tgctcacctc gtccggtcga accgatactg gccaggctac gcccctcccg
     2341 gcccacggtg aagggccgga cgacccaccg gacagccggg tcgaggcgaa ccgggccgct
     2401 tcggccgttc cgggaccgcg gggggtgcgc aacgttcgtg gtcgtgccgg ccgcggcgct
     2461 gccccggggc ggcgcggtcg acgggcaact ccgtgcgttt ggggatcccc accgcacaca
     2521 ccgggctcgt ggggcgccgg acgtgcacga cgactctccc ctgcgggtga cttcgacttg
     2581 gggctccacg agccctggca gcggtactgg tcaggcgagg ccgaggaaga cgacgagggc
     2641 gcggccgagg gcgagcatgt cggtgtcggt caccgttccg acgtagtggc cgagcgtggc
     2701 gcggggcatg gtggttacct tgtcgaccat gatccggctg ggcttggcga gaccggtgcc
     2761 cggcccggcg ggcaggggga tgcgcagcag cgggatctcg gtgggatcgc tggtgagggg
     2821 gcagatggtg acggaatcgg tggcgccgaa gcggtcgtcc tggaggatga gcaccggacg
     2881 gggtttgccg gcatagcgcc ggccgcccgc tgcggtccac agctcacccc gtctcactcc
     2941 cccgcgtcgt cctcggtgcg gtcttcttcg ccgaaccagg agatggcatc gacgaaggcc
     3001 tggtcgtggg ccgcatggtc gctggccgcg gccagggccg actgccggtg ggcctcggcg
     3061 gcgaaccccg gggcccgcac gtcgggcacc cagatctgca ccggccgcat gccctggcgg
     3121 cgcatccggg cccgataggc ggccacccgt tcccgaactg ttggcgattc ccgttccaca
     3181 ccgtcatgtt acatgtaaca agaccgggaa gcgagcacag ttccgaggtt ctaccgcccc
     3241 ggccccggct gtcgggtgcg tcggatgttg ggggcgagag ccgggacgca actgccgcgg
     3301 cgttgccgtt tcctcgctgc tcgccggcgc cgcccctggg ggccaagggg gggcgccccc
     3361 ttgcgtcggc tgcagtcgtt tcccgggcgt cgaggtcggc gtgggaccga tccatccgcc
     3421 cgggcgggag gccgcgtctc tctcctcttc agtgcggacc cggtggcatc agtggcgggt
     3481 tggccgtccc cccggcctga ttcggtgcgg ccgaaaagcc tgccgggaac ccgaccgtcg
     3541 acgaggggtc actccccgtc gccggggacc aggacccgac cggccgtggc ccgatgcaat
     3601 cgttcgatac cgatctcgtc tgccatggcc gccagcctat ggtgatcgct gcctcgacgg
     3661 cggagggtcg agcgaaatcc ctgcgagtgg ggcggtactg cctgccggca gagcgctgcg
     3721 tccgaagaag gcacacctcc aagag
//
LOCUS       DATGJT010000271         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_347934, whole genome shotgun sequence.
ACCESSION   DATGJT010000271 DATGJT010000000
VERSION     DATGJT010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347934"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..636)
                     /locus_tag="VKX24_04615"
     CDS             complement(<1..636)
                     /locus_tag="VKX24_04615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine dehydratase"
                     /protein_id="HLJ07796.1"
                     /translation="MDPLLDQVWRHLHAGDETPPPLDVTGRRDPDRLASPLPVEDAAV
                     ACVGAALLAAADLAALRSGRRPSPSLDRRHVAEAVVSERRFRVDGQERGMGFAPLSRF
                     WPTADGWVRTHANYPWHRRALLSALDVGRDLDDDVGAVGSACTRLPAEEIERRVVDAG
                     GVAAAVRAVGEWAAHPQGRAVTSEPLVSDDLAGPAPARDRRPGPLPASGVRV"
     gene            731..1486
                     /gene="trmD"
                     /locus_tag="VKX24_04620"
     CDS             731..1486
                     /gene="trmD"
                     /locus_tag="VKX24_04620"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011392485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HLJ07797.1"
                     /translation="MRVDVFTIFPTVIDTYCSASLLGKGRDEGVVEIRVHDLRAWADD
                     PHRSVDDAPFGGGPGMVLRCEPLFAAVEAAEPIPRPLFLLSPAGRRFDQATARELASG
                     EGFSLLCGRYEGVDQRVADHLVDGELSVGDVVLAGGEAAALVVIEAVARLVPGVLGNA
                     ESAAEESFADGLLEYPQYTRPADFRGWTVPDVLISGNHGAVARWRRGQALARTLARRP
                     DLIGARGGLSEEERALLEAVGPGPGPTQSRYDA"
     gene            1534..1887
                     /gene="rplS"
                     /locus_tag="VKX24_04625"
     CDS             1534..1887
                     /gene="rplS"
                     /locus_tag="VKX24_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015104444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HLJ07798.1"
                     /translation="MRPTEIIDRDSLRDDVPEFRPGDTLKVHVRVVEGARERVQVFQG
                     AVIRRQGSGISETFTVRKVSFGVGVERTFPVHSPAIAKLELVSHGDVRRAKLYYLRDR
                     VGKAAKIKERRAART"
     gene            1931..>2139
                     /locus_tag="VKX24_04630"
     CDS             1931..>2139
                     /locus_tag="VKX24_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020671262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2469 family protein"
                     /protein_id="HLJ07799.1"
                     /translation="MSEEELEQYEAEIELALVQEYRAVLPMFSYVVETERRFYLANEV
                     SMQVREGSPACIELELTDAWVWDMYR"
BASE COUNT          272 a          772 c          834 g          261 t
ORIGIN      
        1 cacccgcacg cccgacgccg gcagcgggcc ggggcggcgg tctcgtgcgg gagccggtcc
       61 ggcgaggtcg tcggagacga gcggctcgga ggtcaccgcc ctcccctggg ggtgcgccgc
      121 ccactccccg acggcgcgga ccgcggcggc cacgccgccc gcgtcgacca cccggcgctc
      181 gatctcctcc gccgggaggc gcgtgcaggc cgaccccacg gcgccgacgt cgtcgtcgag
      241 gtcccggccg acgtcgagcg cgctgagcag ggcgcgccgg tgccaggggt agttcgcgtg
      301 ggtccggacc catccgtccg cggtgggcca gaagcgggac aacggcgcga agcccatccc
      361 ccgctcctgc ccgtcgaccc ggaaccggcg ttcgctgacc acggcttctg cgacgtgccg
      421 gcggtcgagc gagggggacg gccgtcgacc gctgcgaagg gcggccaggt cggcggcggc
      481 caggagcgcc gcgcccacgc aggcgacggc cgcgtcctcg accggcaggg gcgacgcgag
      541 gcggtccggg tcgcgccgac cggtgacgtc gagcggcggg ggagtctcgt caccggcgtg
      601 gaggtggcgc cagacctggt cgagcagcgg gtccacgaac cctgatcctc acgacctgtg
      661 cccggggcgg caagcccgca cacgggggcg gcggcgctcg gcccgggcat cgagggacta
      721 ggaaggggcg gtgcgggtgg acgtcttcac catcttcccg accgtgatcg acacctactg
      781 ctcggccagc ctgctcggga aggggaggga cgagggtgtg gtcgagatcc gcgtccacga
      841 cctgcgcgcc tgggccgacg acccccaccg ctcggtcgac gacgcgccct tcgggggcgg
      901 cccggggatg gtgctccggt gcgagcccct cttcgcggcg gtcgaggcgg ccgagccgat
      961 cccccggccg ctcttcctcc tgtcgccggc cggccggcgc ttcgaccagg cgacggcccg
     1021 ggagctggcc tcgggcgagg gtttctcgct cctgtgcggc cgctacgagg gcgtggacca
     1081 gcgcgtggcc gaccacctgg tcgacggcga gctctcggtg ggcgacgtcg tgctggccgg
     1141 cggcgaggcc gccgccctgg tggtcatcga ggccgtggcc cgcctcgtgc cgggggtcct
     1201 cggcaacgcc gagtcggcgg ccgaggagag cttcgccgac gggctgctcg agtaccccca
     1261 gtacacccgg ccggcggact tccggggctg gacggtcccc gacgtgctca tctcgggcaa
     1321 ccacggggcc gtcgcccgct ggcgccgggg gcaggcgctg gcccggaccc tcgcccgccg
     1381 ccccgacctg atcggggccc gcgggggcct gtcggaggag gaacgggcgc tgctcgaggc
     1441 cgtcgggccg ggaccggggc ccacccagag cagatacgat gcatagccgg tcctcggacc
     1501 gtccacccct gcccacgccc gcgaggaacc cgcatgcgcc cgaccgagat catcgaccgc
     1561 gacagcctgc gggacgacgt gcccgagttc cgccccggcg acaccttgaa ggtgcacgtg
     1621 cgggtcgtcg aaggggcgag ggagcgggtc caggtgttcc agggggcggt catccgccgt
     1681 cagggctcgg ggatctcgga gaccttcacc gtccgcaagg tcagcttcgg ggtcggggtc
     1741 gagcggacct tcccggtgca ctcgccggcc atcgccaagc tcgagctggt gtcccacggc
     1801 gacgtccggc gggccaagct ctactacctg cgggaccggg tggggaaggc ggcgaagatc
     1861 aaagagcggc gggccgcccg gacgtgaccg gggcggcccc agggggcgcc acaggagctc
     1921 cggtgcgccc gtgagcgagg aggagctcga gcagtacgag gcggagatcg agctcgccct
     1981 cgtccaggag taccgggcgg tgctcccgat gttctcctac gtggtcgaga ccgagcgtcg
     2041 cttctacctc gccaacgagg tctcgatgca ggtgcgggag ggctcgccgg cgtgcatcga
     2101 gctcgagctg accgacgcct gggtctggga catgtaccg
//
LOCUS       DATGJT010000272         3510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1073368, whole genome shotgun sequence.
ACCESSION   DATGJT010000272 DATGJT010000000
VERSION     DATGJT010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3510
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073368"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..2318)
                     /locus_tag="VKX24_04635"
     CDS             complement(108..2318)
                     /locus_tag="VKX24_04635"
                     /inference="COORDINATES: protein motif:HMM:NF014825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C domain-containing protein"
                     /protein_id="HLJ07800.1"
                     /translation="MAMDHAKHHLLFGDANLPPEYDPDREPDRERLLVICDEYGPEEL
                     TAASAVATEIAEETPPQVWATARRLLGLGLDRREVYDELVFAWSHADRTAEAEKKPFD
                     VEAYVRSLGWLPLPDDSVAEVALVEAARAVPGLAVGDAFRLAMQDLGRDAGDELAEVA
                     LGEVVDVVVSDDTRGPLILLSDDRLVHVGDLVAGSVFTHRLTPEERSTGHLPTFELIG
                     INRLAPLRLEEREVDVIAIDERAEHLSLQGPEGWLQGFPAGALIGVRVDESGTVTVSA
                     VAEPAADPDLVDRLRTVYEAEIEDAELPATLTEVALALLVDDPHAFAEPRLPLGELCT
                     AAGLERRGSEVAHNPSYWANADRLRGIGRTLIAFDADNDRNAALRAIDAALDPRLSPA
                     VLREVLDGLAEPGLAAFVADELTAASDARGIDAQAFARRLVQAARRPEQVVVASWLAA
                     VAEERRGGSALAGEEFIRAAVDADPGWPPAIDWAGWYAYDRGDAAGAARWWRALKEPP
                     VDLVVATAFARRPQRELGRNDPCWCGSGRKYKACHLGRPELPALPDRLTWLWRKALAY
                     LERRGNEVADDLLHHAHLLAGGVHDDAKTEEAFSDPLVADVVLHERGWFERFLRERGP
                     LLPNDEMVLATAWMAVPRTVFEVAAVAPGESVTLKDVRTGLELTVPDERFGDDRFERA
                     RSGALVCGRAVFDGEGHQLIGGLFAVQPGTEDVVLELCDARAGEELCAYVATVG"
     gene            complement(2388..>3510)
                     /locus_tag="VKX24_04640"
     CDS             complement(2388..>3510)
                     /locus_tag="VKX24_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07801.1"
                     /translation="FGTRVVNPQDLWWGPMSPGLALALVLILAGGVAICARLRLFGLV
                     AAFWATFAAGAGFVAAGGHCISARWSLEPVCGGSFWSVLALSPEILVFMFFMITDPKT
                     IPSGRVARVAYGAGVGFLAAAAVAPATTEFWTKVGVLAALIVVCAGRPLLERVLPAPG
                     DPSDDLGTWLRAAARGRGPAVVAAGVLVPLLAVALLAVAALPSRSAAAAGEAAVAAAG
                     STVTPNAALPVAPPAVPRVTLGSSVGSFKAPITQAAAQRIATDLADDLATEAEAYRTG
                     DPALAASADTGAWLATVTAEIGNHPPAAAPTRYTLTRLTLELVADRVRPQNPPTVEIE
                     AAGTAASGSSSPAPFATTFSLASSGGAYLISGESPPLGH"
BASE COUNT          479 a         1290 c         1315 g          426 t
ORIGIN      
        1 cagggttttg tgattaggcg gccagcaccg cctgttcccg gggagcagcc ggcggcctgg
       61 cggtcagcgc cggatcagag gcgggtcagc ggcgggtcag cggcgggtca gccgaccgtg
      121 gcgacgtagg cgcacagctc ctccccggcc cgggcgtcgc acagctccag cacgacgtcc
      181 tcggtacccg gttggaccgc gaagaggccg ccgatcagct ggtgtccctc cccgtcgaag
      241 accgcccgcc cgcagacgag cgcccccgag cgggcgcgct cgaaccgatc gtcgccgaag
      301 cgttcgtcgg ggacggtcag ctccaggccg gtccgaacgt ccttgagggt gacgctctcg
      361 ccgggagcca ccgcggcgac ctcgaacacc gtccggggca ccgccatcca ggcggtggcg
      421 agcaccatct cgtcgttggg gagcaatgga ccccgctccc ggaggaagcg ctcgaaccat
      481 ccccgttcgt gcagcacgac gtcggcgacg agcgggtcgc tgaaagcctc ctcggtcttg
      541 gcgtcgtcgt gcacgccgcc ggccaggaga tgggcgtggt gcaggaggtc gtcggcgacc
      601 tcgttccccc gccgctccag gtaggcgagg gccttgcgcc acagccaggt gagccggtcg
      661 ggcaacgccg gcagctcggg tcgaccgagg tggcaggcct tgtacttgcg gccggagccg
      721 caccagcagg ggtcgttccg gcccagctcc cgctgcggcc gccgggcgaa ggccgtggcg
      781 accaccaggt cgaccggcgg ctccttgagc gcccgccacc agcgggccgc cccggcggca
      841 tcgccccggt cgtaggcgta ccagccggcc cagtcgatcg ccggcggcca gcccggatcg
      901 gcgtcgaccg ccgcccggat gaactcctct cccgccagcg ccgagccccc ccgccgttcc
      961 tctgccaccg ctgccagcca ggaggcgacc accacctgct ccggcctgcg ggccgcctgc
     1021 accagccggc gggcgaacgc ctgggcgtcg atgccccggg cgtcgctggc cgcggtcagc
     1081 tcgtcggcga cgaaggccgc cagtcccggc tcggcgagcc cgtcgaggac ctcgcgcagc
     1141 actgccgggg agagcctcgg atcgagcgcc gcgtcgatgg cccggagcgc ggcgttgcgg
     1201 tcgttgtcgg cgtcgaaggc gatcagggtg cggccgatcc cgcggagccg atcggcgttg
     1261 gcccagtagg acgggttgtg ggcgacctcc gagccgcggc gctcgagccc ggcggcggtg
     1321 cacagctcgc cgaggggcaa ccggggctcg gcaaaggcgt gcggatcgtc gacgaggagg
     1381 gccagggcga cctcggtcag cgtcgccggg agctcggcgt cctcgatctc ggcttcgtag
     1441 accgtcctga gccggtcgac caggtccgga tcggccgccg gttcggcgac cgccgagacg
     1501 gtgacggtcc cgctctcgtc gacccgcacc ccgatcaatg cccccgccgg gaagccctgg
     1561 agccagcctt ccggcccctg caggctgagg tgctcggcgc gctcgtcgat ggcgatgacg
     1621 tcgacctccc gctcctcgag ccgcagcggc gccagccggt tgatcccgat cagctcgaag
     1681 gtcgggaggt ggccggtgct ccgctcctcc ggtgtcaggc ggtgggtgaa caccgatccg
     1741 gccacgaggt cgccgacatg caccaggcgg tcgtcggaaa gcaggatcag cgggccgcgg
     1801 gtgtcgtcgg agactacgac gtcgacgacc tcgcccagcg ccacctcggc cagctcgtcg
     1861 ccggcgtcgc gccccagatc ctgcatcgcc agccggaagg cgtcgccgac cgccaagccg
     1921 ggcaccgccc gggcggcctc gaccagcgcc acctcggcga ccgagtcgtc ggggaggggc
     1981 agccagccga gcgaccggac gtaggcctcg acgtcgaacg gcttcttctc cgcctcggcg
     2041 gtgcggtcgg cgtggctcca ggcgaagacg agctcgtcgt agacctcccg gcgatcgagg
     2101 ccgaggccga gcaggcggcg ggcggtggcc cagacctggg gcggggtctc ctcggcgatc
     2161 tcggtggcca ccgcgctggc cgccgtcagc tcctccggcc cgtactcgtc gcagatgacg
     2221 agcagcctct cccggtccgg ctcgcggtcg gggtcgtact cgggggggag gttggcgtcc
     2281 ccgaacagca ggtggtgctt ggcgtggtcc atggccatga cactactgag gggtaccgac
     2341 aaaaccccgg cgattttccc cagagtggga agagtttttc gggctcctca gtgcccgagc
     2401 ggcggcgact cgccggagat caggtaggcg ccgccgctgg aggcgagcga gaacgtggtg
     2461 gcgaaggggg ccgggctgga cgatccgctg gctgcggtgc cggccgcttc gatctcgacg
     2521 gtcggcgggt tctgcggccg gacccggtcg gcgacgagct ccagcgtcag ccgggtgagg
     2581 gtgtagcggg tcggcgccgc cgccggcggg tggttgccga tctcagcggt gacggtcgcc
     2641 agccaggctc cggtgtccgc cgacgccgcc agtgcggggt ccccggtgcg gtaggcctcg
     2701 gcctcggtgg ccagatcgtc ggcgaggtcg gtggcgatcc gctgcgcggc cgcctgggtg
     2761 atcggcgcct tgaagctccc caccgaggag ccgagggtca cccggggcac cgccggcggc
     2821 gcaacgggga gggcggcgtt cggggtcacc gtcgagccgg cggctgccac cgccgcctcc
     2881 cccgccgcgg cggcgctgcg gctgggcagg gcggcgacgg cgaggagggc gacggcaagc
     2941 agcgggacca gcaccccggc ggcgaccacg gcggggcccc ggccccgtgc cgctgcccgc
     3001 agccaggtcc ccaggtcgtc cgaggggtca ccgggcgcgg gcaacacccg ctccagcagc
     3061 gggcgcccgg cgcagacgac gatcagcgcc gcgagcacac cgaccttcgt ccagaactcg
     3121 gtggtcgccg gcgccaccgc cgccgccgcc aggaagccga cgcccgcccc gtaggcaacc
     3181 cgggcgaccc gcccggaggg gatcgtcttg gggtcggtga tcatgaagaa catgaacacg
     3241 aggatctccg gcgacagtgc cagcaccgac cagaacgacc cgccgcacac cggctcgagg
     3301 ctccaccgcg ccgagatgca gtggcctccg gcggcgacga atccggctcc ggcggcgaag
     3361 gttgcccaga aggcggcgac gagcccgaac agccggaggc gggcgcagat cgccacgccg
     3421 ccggcgagga tcaggaccag cgccagcgcc aacccgggcg acatcggccc ccaccacagg
     3481 tcctgcgggt tgaccacccg ggtcccgaac
//
LOCUS       DATGJT010000273         2907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_140330, whole genome shotgun sequence.
ACCESSION   DATGJT010000273 DATGJT010000000
VERSION     DATGJT010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140330"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1001
                     /locus_tag="VKX24_04645"
     CDS             <1..1001
                     /locus_tag="VKX24_04645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="cyclohexanone monooxygenase"
                     /protein_id="HLJ07802.1"
                     /translation="TVFQRTPNYSFPGQIEPVDAELLDFVKQNYRELRSMQRTSGAGI
                     SGMTMQTADGGTRAVGAGVFSGQNRNVTTADRAQMAEALQKMEQGFAKMVRKRVHDPE
                     VAEALIPKDYHLGCKRIVVEVGYFETFNRDNVTLVDLRRDPISEITPGSVRTEGAEFP
                     IDVLVLATGFDALTGPLTRIAIEGRDGRTLAEEWRDGPRTYLGLMSEGFPNLFMVTGP
                     GSPSVLSNMVVSIEQHVDWLTAAIGAHRAAGVTMEPTPEAQATWLEHVHEVSEGTPWT
                     APSCNSWYLGANIEGKTRTILPYTGGVGRYREICEEVAADGYRGFRSAEAVGSARA"
     gene            complement(1017..1895)
                     /locus_tag="VKX24_04650"
     CDS             complement(1017..1895)
                     /locus_tag="VKX24_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014209876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07803.1"
                     /translation="MLAATLEPVAGQVYFSPEAHAAYERLGFGPSPGDFAGVRAPESA
                     AYFTSRGSVMGQVPGEVVAAAFGVFNPAVVVDAVDRGWALTDAATICAARDEGAIAQL
                     VRVIGEEPEGIARANELLTRAVAPLRPEGRPLFAGLASLEMPSAPVGAMWRRADMLRE
                     YRGDSHVNAWTTAAVDACEMCLLTEPYWGLPLRTYSRTRAWSDAEFDAATERLIERGW
                     LRDGALSDDGRAERERIEVATDLQCRPVVDALGDDLDELVAILSPWGSAVRAAKGYPA
                     SGPQELADAATRRREG"
     gene            complement(1996..2652)
                     /locus_tag="VKX24_04655"
     CDS             complement(1996..2652)
                     /locus_tag="VKX24_04655"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005246482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ07804.1"
                     /translation="MSQRSHDAPDPYRGRTPTSHERLAGQPWDASYHHGPAPWDVGHP
                     QEAVVRIAAAGGFTGRVLDAGCGTGENALHLAALGRPVLGVDVAETAVAAARAKANER
                     GLKADFDVADAFELASLGRTFDSVLDCGLFHSLDADERQRYLSSVASVAERGATLYVL
                     CFSDRGAELGPHPVSEGELRSAFERSGSWQVIAIDADRVETRFHDHGAPAWLATCRRS
                     "
BASE COUNT          409 a         1064 c         1046 g          388 t
ORIGIN      
        1 tgacggtctt ccagcgcacg ccgaactact cgttcccggg ccagatcgag ccggtggacg
       61 ccgagctcct cgacttcgtg aagcagaact accgggagct ccgcagcatg cagcggacct
      121 cgggcgccgg gatctcgggc atgaccatgc agaccgcgga cggcgggacg agagcggtgg
      181 gggcgggcgt gttctccggg cagaaccgca acgtcaccac cgccgaccgg gcccagatgg
      241 ccgaagccct gcagaagatg gaacagggtt tcgccaagat ggtccgaaag cgcgtgcacg
      301 accccgaggt cgccgaggcg ctcatcccga aggactacca cctcggctgc aagcggatcg
      361 tcgtcgaggt cggctacttc gagacgttca accgcgacaa cgtgaccctg gtcgacctgc
      421 gccgggaccc gatcagtgag atcacgccgg ggtcggtccg gaccgagggg gccgagttcc
      481 cgatcgacgt gctcgtcctc gccaccgggt tcgacgcgct caccgggccc ctgacccgga
      541 tcgccatcga aggccgggac ggccgcacgc tggccgagga gtggcgcgac ggcccgcgca
      601 cctatctcgg gctcatgagc gaagggttcc ccaacctctt catggtgacc gggcccggca
      661 gcccgagcgt gctgtcgaac atggtggtgt ccatcgagca gcacgtcgac tggttgaccg
      721 cggccatcgg ggcccatcgg gccgcggggg tcacgatgga gccgacgccc gaggcccagg
      781 ccacctggct cgagcacgtc cacgaggtct ccgaaggaac cccgtggacg gccccgagct
      841 gcaactcctg gtacctcggg gccaacatcg agggcaagac gaggaccatc ctcccctaca
      901 ccgggggcgt cggccgctac cgggagatct gcgaggaggt cgcagcggac gggtaccggg
      961 gcttccggtc ggccgaggcc gtgggctcgg ctcgggccta gtccgggggt cggacctcag
     1021 ccctcccgtc gtcgcgtggc cgcgtcggcg agctcctggg ggcccgacgc cgggtacccc
     1081 ttggcggccc ggacggccga cccccacggg gagaggatgg ccaccagctc gtcgaggtca
     1141 tctccgagcg cgtcgacgac ggggcggcac tgcaggtcgg tggcgacctc gatccgctcg
     1201 cgctcggctc gcccgtcgtc gctgagggcg ccgtctcgga gccagccgcg ctctatgagc
     1261 cgttcggtcg ccgcgtcgaa ctcggcgtcg ctccacgccc gcgtcctgct gtaggtgcgc
     1321 agcggcagtc cccagtaggg ctcggtcagg aggcacatct cgcaggcgtc gaccgcggcc
     1381 gtcgtccagg cgttgacgtg cgagtcgccc cggtactcgc gcagcatgtc ggctctccgc
     1441 cacatggcgc cgaccggggc gctcggcatc tcgagcgacg ccagtccggc gaagaggggg
     1501 cggccctcgg gacggagggg tgcgacggcc cgggtcagga gctcgttcgc tcgggcgatg
     1561 ccctccggct cctcaccgat gacgcgcacg agctgcgcga tcgccccttc gtcgcgcgcc
     1621 gcacagatcg tggcggcgtc cgtgagcgcc caaccacggt ccacggcgtc gaccacgacc
     1681 gccgggttga agaccccgaa ggccgcggcg acgacctcgc cgggcacctg gcccatcacc
     1741 gacccgcggg aggtgaagta ggcggcactc tccggtgccc gcaccccggc gaagtccccg
     1801 gggctgggcc cgaagcccaa gcgctcgtag gcggcgtggg cctcgggcga gaagtacacc
     1861 tgtccggcga ccggttcgag cgttgccgcg agcacccgcg ctcgcttcga ccattcctcc
     1921 acgggggcct cctcggatcg tcgctcactc taaacagcac acggtcgacg gggtcgaccg
     1981 cgacctcgcc gccgcctagc tccgacggca ggtcgccagc caggccgggg cgccgtggtc
     2041 gtggaagcgc gtctcgaccc ggtcggcgtc gatcgcgatc acctgccaac tcccgctccg
     2101 ttcgaaggcc gacctgagct cgccctcgct caccgggtgc gggccgagct cggcgccccg
     2161 gtcgctgaag cacagcacat agagggtcgc accccgctcg gcgaccgagg ccacactgga
     2221 caggtagcgc tgccgttcgt cggcgtcgag gctgtggaac agcccgcagt cgagcaccga
     2281 gtcgaacgtg cggccgagcg atgccagctc gaacgcgtcg gcgacgtcga agtcggcctt
     2341 caggccccgc tcgttggcct tggcccgggc ggccgccacc gcggtctcgg cgacgtcgac
     2401 cccgaggacc ggccgaccga gtgccgccag gtgcagcgcg ttctccccgg tgccgcatcc
     2461 ggcgtcgagc accctcccgg tgaacccgcc ggcggcggcg atgcgcacga cggcctcctg
     2521 gggatgtccg acgtcccagg gcgcagggcc gtggtggtac gacgcgtccc agggttgccc
     2581 ggcgaggcgc tcgtggctgg tcggggtccg cccccggtag gggtcgggcg catcgtggct
     2641 cctctgcgac atggctcccc tctcgaccgg cccttcatgg tcgcgccacc gtccccatgg
     2701 ggccgggccg actggcggcg gggcgagacc ggggggcggc tcggtcacgc gagggatcgg
     2761 ccgacggccc gctcgacgag ccgcaggccc tcgagcccgg ggaggcggtc gatctggcgg
     2821 tcgatccggc gcgcctcctc ccggccctgg tcgtcgccga agaggtactg cgcgaggaac
     2881 cggatctctg cggggggcat caccccc
//
LOCUS       DATGJT010000274         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_140692, whole genome shotgun sequence.
ACCESSION   DATGJT010000274 DATGJT010000000
VERSION     DATGJT010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140692"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..>2212)
                     /locus_tag="VKX24_04660"
     CDS             complement(138..>2212)
                     /locus_tag="VKX24_04660"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HLJ07805.1"
                     /translation="WMEGAVPLFLALLLSVVIIATTPGFSEAGNTELVFRELAEKGLI
                     AIGLTVVMIAGGIDLSVGSLTGVVAMGSLAAMRALQWPVPVIIVASLLAGMALGAVNG
                     FLIAKVKTKPFITTLVTLLVFRTVVQAIQKHYTMGLAFPRTNTMWSFLGDGKIAGIQT
                     SLFIFLVVLVVTHLTITRARWGWWVTAVGSDRRSARRNGVPIDRVIFATYVVSGLLCG
                     LAGLLLAARQGSTSEQVGTGYEIAALTAVVLGGVSLRGGRGSAVRAAVGMFVVAIIGR
                     ATQLKGKPDEWNEAALAVVLLAFAVLDLKWGKYRARIAEKLQLDPSTVKAGELVDVTQ
                     PGTVWTINHVLTEAEPIGIGQIEGAEDCALDDDGNMYCGDRRGWIWKFPAGSPRGEVF
                     ARTGGLPLGHAWDLGGNLLVAVGGIGVYRILPDGSTEMVANQTRRSRLSLHDDSAIRF
                     ADDLDVTADGAIFLSDFSTRINAADYQLELVEYRPNGRIIRVDADGSTDVVVDNYVFP
                     NGVCTSHDGQSVLIASTGLFRVDRLWVSGPKQGQFEPVMENLPGYPDNINRSSDGRYW
                     MSFVAMRTPTSDLFLRWPTVRRRMTKELPPDDWIVPQLNVSCVLKFTDAGEVLKVWWD
                     ATLEKHPMVTSMNEHEGYLYLCGIQNNRVGKLTLDPSELGPIDPRVCPGATSQARPFS
                     AGRTPAHA"
BASE COUNT          349 a          760 c          772 g          331 t
ORIGIN      
        1 agggcctggt cgaggcggct gttggggcgg agccccgcct ccagcggcgg cagcgagtgg
       61 tgcttgaccg acgccggtga gatgaactcc ctgactcccc ggagcacacg attcacgaac
      121 ggtcttctcc ctggccgcta ggcgtgggct ggcgtccgac cagccgagaa cggccgcgcc
      181 tgggacgtcg ctcccgggca cacccgcggg tcgatcggac cgagctccga cgggtcgagc
      241 gtcagcttgc cgacccggtt gttctggatg ccgcagagat agaggtaccc ctcgtgttcg
      301 ttcatggacg tcaccatggg atgtttctcg agcgtggcgt cccaccacac cttgagcacc
      361 tctcccgcgt ccgtgaactt gaggacgcac gacacgttca gctggggcac gatccagtcg
      421 tcgggcggca gctccttggt catccgccgc cgtacggtcg gccagcgcag gaacaggtcc
      481 gaggtcggcg tgcgcatggc cacgaacgac atccagtagc ggccgtcgga cgaccggttg
      541 atgttgtcgg ggtacccggg caggttctcc atgaccggct cgaactgccc ctgcttcggg
      601 ccgctgaccc acaggcggtc cacccggaag aggccggtgc tggcgatcag caccgactgg
      661 ccgtcgtggc tggtgcacac gccgttgggg aagacgtagt tgtcgacgac gacgtcggtg
      721 gagccgtcgg cgtcgacccg gatgatccgg ccgttgggcc ggtattcgac gagctcgagc
      781 tggtagtcgg cggcgttgat ccgcgtcgag aagtcggaga ggaagatggc gccgtcggcc
      841 gtcacgtcga ggtcgtcggc gaagcggatg gccgagtcgt cgtgcagcga cagacggctg
      901 cgccgggtct ggttggccac catttcggtg gacccgtcgg gcaggatgcg gtacacgccg
      961 atgccgccca cggccacgag gaggttcccg ccgagatccc aggcgtggcc gagcggcaga
     1021 ccgccggtgc gggcgaacac ctctccccgc gggctgccgg cggggaactt ccagatccag
     1081 ccccgccggt cgccgcagta catgttgccg tcgtcgtcga gggcgcagtc ctcggcgcct
     1141 tcgatctgcc cgatgccgat cggttcggcc tcggtgagga cgtggttgat cgtccacacc
     1201 gtccccggct gcgtgacgtc gacgagctcg ccggccttca ccgtcgacgg gtcgagctgg
     1261 agcttctcgg cgatgcgggc gcggtacttg ccccacttga ggtcgaggac ggcgaaggcc
     1321 agcagcacga cggccagcgc cgcctcgttc cattcgtcgg gcttcccctt gagctgggtc
     1381 gcccggccga tgatggccac gacgaacatg ccgaccgccg ctcgcaccgc cgagccccgg
     1441 ccgccgcgga ggctgacgcc gccgagcacg acggcggtca gcgccgcgat ctcgtagccc
     1501 gtcccgacct gctccgacgt cgagccctgc cgggcggcca gcagcagccc ggccaggccg
     1561 cacagcagcc ccgacaccac ataggtggcg aagatgaccc ggtcgatcgg gacgccgttg
     1621 cgccgggccg agcgccggtc cgacccgacg gcggtcaccc accagcccca ccgggcccgg
     1681 gtgatcgtca ggtgggtgac gacgaggacg acgaggaaga tgaacaggct cgtctggatg
     1741 ccggcgatct tcccgtcgcc gaggaacgac cacatggtgt tcgtcctggg aaaagccaag
     1801 cccatggtgt agtgcttctg gatcgcctgc accaccgtgc ggaacaccag cagcgtgacc
     1861 agcgtggtga tgaacggctt ggtcttgacc ttggcgatca ggaagccgtt caccgccccg
     1921 agggccatcc cggccagcag cgacgccacg atgatcaccg ggacgggcca ctgcagggcc
     1981 cgcatggcgg ccagcgaccc catggccacc acgccggtga gggagccgac cgagaggtcg
     2041 atgccgccgg cgatcatcac cacggtgagg ccgatggcga tgagcccctt ctccgccagt
     2101 tcgcggaaga ccagctcggt gttgcccgcc tcgctgaacc ccggcgtcgt ggcgatgatc
     2161 accacgctca agagcagggc caggaacagg gggacggcgc cttccatcca cc
//
LOCUS       DATGJT010000275         3643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_969571, whole genome shotgun sequence.
ACCESSION   DATGJT010000275 DATGJT010000000
VERSION     DATGJT010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_969571"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1204)
                     /locus_tag="VKX24_04665"
     CDS             complement(<1..1204)
                     /locus_tag="VKX24_04665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016469274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HLJ07806.1"
                     /translation="MPPAADGAGRVLLTGWGRTAPTAAELRPLRHADDAGAALAPPPG
                     RGVIARGLGRSYGDAAQNAGGVVLDGTGLDRIDAVDLAAGTVTCGGGVSLDRLMRTLV
                     PLGWFPAVTPGTRHVTVGGAIAADIHGKNHHRDGSFAEHVASLTLAAPAGRFELDPKG
                     DPGDSDRRDLFWATAGGMGLTGVVTSATLRLTPVETSRIRVDTERAADLDDVLARMES
                     GDDGYRYSVAWIDCLARGRALGRSVLTRGDHAVADDLPPAERRPERALAFSPAERLSA
                     PPWVPPGLLNRLSVQAFNELWFRKAPRFEQGRIEPLHSFFHPLDGVRGWNRIYGPRGF
                     VQYQFVVPFGPSGEAALRTAVERLSSARAASFLAVLKRFGAADPGPLSFPAPGWTLAL
                     DIPAAVAGL"
     gene            complement(1212..2210)
                     /locus_tag="VKX24_04670"
     CDS             complement(1212..2210)
                     /locus_tag="VKX24_04670"
                     /EC_number="2.4.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013117600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decaprenyl-phosphate phosphoribosyltransferase"
                     /protein_id="HLJ07807.1"
                     /translation="MSDADLSTDAPPVVERVTDPVAVAPPTPAAPAAPARPAGWKYTL
                     PGGLLRAARPRQWIKNVLVFAAPGAAGISLTPAKLAPVFGAFAAWCLVSSGTYLVNDS
                     LDAEADRLHPRKRLRAVASGVVAVGTARAVGLGLLVVGAGAPIAWGAPGVSGFLVLYA
                     AITLSYSLWLKEMAIVDLAAVASGFVLRAISGGVAAHVVISDWFLIVASFGSLFMVAG
                     KRHAEHLDLREGRGAHRATLEEYSLGFLNYVRAVSSGVTITAYCLWAFEKAKLAGDPV
                     LFQLSIIPFVMAILRYALLLDAGRGGAPEEVVLGDRALQVLGLVWVALFAAGVYAA"
     gene            complement(2207..3547)
                     /locus_tag="VKX24_04675"
     CDS             complement(2207..3547)
                     /locus_tag="VKX24_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07808.1"
                     /translation="MDPRKLLEGRNNPLPEGTLAVGAGLIVSGVTSYGFLAISARALG
                     PERYAPLGVLWALTYVVCPGVYLPLEQEVGRALSSRRARGLGGGPLIHRAALAGGVAA
                     AVLIAVTGLTGPLTLGSLFDHKVLLLVALMVSLAGYYVEFLVRGVLSGNGRFGSYGII
                     LGSVAFLRMLACAGLALVGVNTVGPYGVIIGLSPIAATLLGVRKERNLVKPGPDAPWS
                     ELSSALGYLLAGSVMAQLLVNAGVFAVQLLADAEQKGKHGVAGRFLNGLIIARIPLFM
                     FQAVQAALLPKLAHLAGAGRHADFRTGLKRLLLVVVAIGVLATVTAFAIGPFVVTTMF
                     GADFRLSHTDLGYLAAASAVYMLALALAQALIALKNYPRVVVGWAVGLVVFVIVTALS
                     HDLLPRVEQGFLAGSVASAIAMAWAVHRLLAAGLARTHEVEELLEASHQLPIEP"
BASE COUNT          556 a         1297 c         1420 g          370 t
ORIGIN      
        1 ccagtcccgc cacggcggcg gggatgtcca gcgccagcgt ccaccccggc gccgggaacg
       61 acagcggccc ggggtcggcg gcgccgaagc gcttgagcac ggccaggaac gaggcggcgc
      121 gggcggagct gaggcgctcg acggccgtcc gcaacgccgc ctcgccggac gggccgaagg
      181 gcacgacgaa ctggtactgc acgaagcccc ggggcccgta gatgcggttc cagccccgga
      241 cgccgtccag cgggtggaag aacgagtgca gcggctcgat ccggccctgc tcgaaacggg
      301 gcgccttgcg gaaccacagc tcgttgaagg cctgcaccga caaccggttg agcagccccg
      361 gcggcaccca cggcggcgcc gacagccgct cggcggggga gaaggccagc gcccgctccg
      421 ggcggcgctc cgccggcggc aggtcgtcgg ccacggcgtg gtcgccccgg gtcagcaccg
      481 atcggccgag cgcccggccc cgggccaggc agtcgatcca ggccaccgag tagcggtagc
      541 cgtcgtcgcc ggactccatc cgggcgagga cgtcgtcgag gtcggcggcc cgctcggtgt
      601 cgacccggat gcgggacgtc tcgaccggcg tgaggcgcag tgtggccgac gtcacgacgc
      661 cggtcaggcc catgccgccg gcggtggccc agaagagatc ccgccgatcg ctgtcgccgg
      721 ggtcgccctt ggggtcgagc tcgaagcgcc cggccggggc ggccagggtg agcgaggcca
      781 cgtgctcggc gaagctcccg tcccgatggt ggttcttgcc gtggatgtcg gcggcgatgg
      841 cgcccccgac ggtgacgtga cgggtcccgg gcgtgacggc agggaaccag ccgagcggca
      901 ccagcgtccg catcagccgg tcgaggctga cgccgccgcc gcaggtgacg gtgccggcgg
      961 cgaggtcgac ggcgtcgatg cggtcgaggc cggtgccgtc gaggacgacg ccgccggcgt
     1021 tctgggccgc gtcgccgtag ctgcggccga ggccgcgggc gatgacgccc cgcccgggcg
     1081 gcggcgccag cgccgcaccg gcgtcgtcgg cgtggcgcag cgggcggagc tcggcggcgg
     1141 tcggggccgt gcggccccag ccggtcagga ggacgcggcc ggcgccgtcc gccgccggcg
     1201 gcatcgaatc atcaggcggc atagacgccg gcggcgaaca gggccaccca gaccagcccc
     1261 aggacctgca gcgcccggtc gccgagcacg acctcctcgg gggcgccgcc ccggccggcg
     1321 tcgaggagca gggcgtagcg gaggatggcc atcacgaagg ggatgatcga cagctggaac
     1381 agcaccgggt cgccggccag cttggccttc tcgaaggccc acaggcagta ggcggtgatg
     1441 gtgacgcccg acgacaccgc ccggacgtag ttcaagaacc cgagcgagta ctcctccagc
     1501 gtcgcccggt gggcgccccg gccctcccgg aggtcgaggt gctcggcgtg gcgcttgccg
     1561 gccaccatga acagcgagcc gaacgaggcc acgatcagga accagtcgga gatgacgacg
     1621 tgcgccgcca cgccgccgga gatggcccgg agcacgaacc ccgaggccac cgcggccagg
     1681 tcgacgatgg ccatctcctt gagccacagg ctgtaggaca gggtgatggc ggcgtagagg
     1741 acgaggaacc cgctgacgcc cggggcgccc caggcgatcg gcgcgccggc gccgacgacg
     1801 agaaggccga gccccacggc ccgggcggtg ccgacggcga cgacccctga ggccacggcc
     1861 cggaggcgct tgcggggatg gaggcggtcg gcctcggcgt cgagggagtc gttgaccagg
     1921 taggtgccgg acgacacgag gcaccaggcg gcgaaggcgc cgaacaccgg ggcgagcttg
     1981 gccggggtga gcgagatccc ggccgccccg ggagcggcga agacgaggac gttcttgatc
     2041 cactgccggg gccgggcggc ccggagcagg ccgccgggga gcgtgtactt ccaccccgcg
     2101 gggcgggcgg gggccgccgg ggccgccggg gtgggcggag cgacggccac ggggtcggtc
     2161 acccgttcga cgacgggcgg ggcgtcggtg gagaggtcgg cgtcgctcac ggctcgatcg
     2221 ggagctggtg gctggcctcg aggagctcct cgacctcgtg ggtgcgggcc aggccggcgg
     2281 ccagcagccg gtgcaccgcc caggccatgg cgatggccga cgccaccgac ccggccagga
     2341 agccctgctc cacccggggc agcaggtcgt gggacagagc ggtgacgatc acgaacacca
     2401 ccagcccgac ggcccagccg actaccaccc gggggtagtt cttgagggcg atgagggcct
     2461 gggccagcgc cagggccagc atgtagacgg cgctggcggc ggccaggtag ccgaggtcgg
     2521 tgtgcgacag gcggaagtcg gccccgaaca tcgtcgtcac cacgaacggg ccgatggcga
     2581 aggcggtgac cgtggccagc acgccgatgg ccaccaccac caggagcagc cgcttgagcc
     2641 cggttcggaa gtcggcgtgg cgcccggcgc cggccaggtg ggccagcttc ggcagcagcg
     2701 ccgcctgcac cgcctggaac atgaacagcg ggatccgggc gatgatcagc ccgttgagga
     2761 accggccggc gacgccgtgc ttccccttct gttcggcgtc ggccaggagc tggacggcga
     2821 acacgccggc gttcaccagc agctgggcca tcaccgaccc ggccaggagg tagccgaggg
     2881 cgctggagag ctcggaccac ggggcgtcgg gccccggctt gaccaggttg cgctccttgc
     2941 gcaccccgag cagcgtggcg gcgatcggcg acagcccgat gatcacgccg tagggcccga
     3001 cggtgttgac gccgaccagc gccaggccgg cgcaggccag catccgcagg aaggccacgg
     3061 agccgaggat gatgccgtag gagccgaacc ggccgttccc cgacagcacg ccccggacca
     3121 ggaactcgac gtagtacccc gccagcgaca ccatcagcgc caccagcagc aggaccttgt
     3181 ggtcgaagag gctgccgagc gtcagcggcc cggtcaggcc ggtcacggcg atgaggacgg
     3241 cggccgccac gccgccggcc agcgccgccc ggtggatgag cggcccgccg ccgagccccc
     3301 gggcccgccg cgacgacagc gcccgcccca cctcctgctc cagcggcagg tacacgccgg
     3361 ggcagacgac gtaggtcaac gcccacagga ccccgagcgg ggcgtagcgc tccgggccga
     3421 gcgcccgggc cgagatggcc aggaacccgt aggacgtgac gccgctcacg atgagcccgg
     3481 cgccgacggc cagggttccc tccgggaggg ggttgttccg cccctccagc agcttcctgg
     3541 gatccatcgg gggtgagcct aggcggtgac cggcgcccgg ccggtgacgc tgacccggcg
     3601 ccgaatcagg tacgcggcct taggaacgct gccagtcctt cca
//
LOCUS       DATGJT010000276         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_243995, whole genome shotgun sequence.
ACCESSION   DATGJT010000276 DATGJT010000000
VERSION     DATGJT010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243995"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VKX24_04680"
     CDS             complement(<1..413)
                     /locus_tag="VKX24_04680"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HLJ07809.1"
                     /translation="MTERRIGGRWKVQALIGQGGMADVYRAVDAEEGGAVALKLLRSP
                     DPVLARRLANEARTLESFDHPNLVRLLGTGIDEGCAYLVTELVDGPTLGMLLRNGPIP
                     AAQVAEMGAALAGALAYVHARGIVHRDVKPANVLLG"
     gene            587..1042
                     /locus_tag="VKX24_04685"
     CDS             587..1042
                     /locus_tag="VKX24_04685"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020618692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ07810.1"
                     /translation="MQIRDAGAEDVEALRGVFRRSSLSNEGDRASLRAHPEALEFELP
                     GPESTVRVAVINGSVAGFATTRVLPDGRLELDDLFVEPGAMRGGVGTALVEDMDAWAQ
                     AHGCPSIEVTANPHALAFYERVRFRVCGPAETRFGPAHRMRRAVRPASD"
     gene            complement(1066..1884)
                     /locus_tag="VKX24_04690"
     CDS             complement(1066..1884)
                     /locus_tag="VKX24_04690"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HLJ07811.1"
                     /translation="MTDEVERHLARIEAHGFTVLEGVLEPDLVDALDDDLRRLEAELG
                     IGPGENLFEGTSTTRIYNLLAHGELYERIPLYAPVLEVVEGVLDPGLLVSSLSSIAIG
                     PGERAQPLHTDDQMIPIPRPHAQIICNTMWALTDFTEENGATRVVPGSHLADRVPDPA
                     APPDTVAAEMARGSVLVFVGSLWHGGGANRTDERRVGIAMNYCAGFLRQQENQQLGLP
                     RELVARFPRRLQELVGYSIYNGLIGHIDKNHPVSVLLESPERADMIWDHVRSRG"
     gene            1958..>2273
                     /locus_tag="VKX24_04695"
     CDS             1958..>2273
                     /locus_tag="VKX24_04695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07812.1"
                     /translation="MTDTTGSDNVRRPTAMDEFFVHQIPEPLPDVALRSPHWRESYFF
                     DIHQPDAAGDVVFFTMAHYPAHERMDSLQMGKVDGKPVMGVLARPYDGDPHTTDVGGA
                     LVE"
BASE COUNT          312 a          810 c          819 g          332 t
ORIGIN      
        1 ccgagcagca cgttggccgg cttcacgtcc cgatggacga tgcctcgggc gtgcacgtag
       61 gcgagcgcgc cagcgagggc ggcccccatc tcggccacct gtgcggccgg gatcggcccg
      121 ttccgcagca gcatgcccag ggtgggcccg tcgacgagct cggtcacgag gtaggcgcag
      181 ccctcgtcga tcccggtccc gaggagccgg acgaggttgg gatggtcgaa ggactcgagc
      241 gtcctcgcct cgttggcgag gcgccgggcg agcaccggat ccggcgaacg gaggagtttg
      301 agggccacgg ctccgccctc ctcggcgtcg accgcccggt agacgtcggc catgccgccc
      361 tgcccgatca gggcctggac cttccagcgg cccccgatcc gtcgctcggt caccgcgacc
      421 ccggaggcgg ggcccggccg cgagccgtcg cgctcgtccg gacgcggccc acctaagacc
      481 ggtcgatcga cttcggtcac cgccggtaca tacccggctc ccccggccaa gatgcccctc
      541 cagggcggcc acggggccga tcgggcagcc cgggcagact gtcgacgtgc agatcaggga
      601 cgccggggcc gaggacgtcg aggccctccg aggggtcttt cgccgctcct cgctctcgaa
      661 cgagggcgat cgggcctcgc tccgcgccca cccagaggcg ctcgagttcg agctgccggg
      721 cccggagtcg acggtcaggg tggccgtcat caacggctcc gtcgccgggt tcgccaccac
      781 ccgggtcctg ccggacggcc gtctcgagct cgatgacctg ttcgtcgagc ccggcgcgat
      841 gcggggaggg gtcgggacgg ccctcgtcga ggacatggac gcgtgggcgc aggcgcacgg
      901 ctgcccgtcg atcgaggtga cggccaaccc ccacgccctg gccttctacg agcgggtgcg
      961 gttcagggtc tgcggcccgg ccgagacccg cttcggtcca gcccatcgca tgcgccgggc
     1021 ggttcggccg gcgtcggact gagcgtcggc cgccgttctc ctcggtcagc ccctggaccg
     1081 cacgtggtcc cagatcatgt cggcgcgctc gggtgactcg aggagcaccg agaccgggtg
     1141 gttcttgtcg atgtgcccga tgagcccgtt gtagatggag tagccgacga gctcctgcag
     1201 ccgcctcggg aaccgggcca ccagttcccg tggcagtccg agttgttggt tctcctgttg
     1261 ccggaggaaa ccggcgcagt agttcatggc gatcccgacc cgccgctcgt cggtccggtt
     1321 ggcgccgccg ccgtgccaga ggctgccgac gaaaacgagc acgctgcccc gggccatctc
     1381 ggcggccacg gtgtcgggcg gcgcagcggg gtcggggacc cggtcggcga gatggctccc
     1441 cggcaccacc cgggtcgccc cgttctcctc ggtgaagtcg gtgagcgccc acatggtgtt
     1501 gcagatgatc tgcgcgtgcg ggcgggggat ggggatcatc tggtcgtcgg tgtgcagcgg
     1561 ttgggcgcgc tcgcccggcc cgatcgcgat ggacgaaagc gacgagacca ggagaccggg
     1621 gtcgaggacc ccctccacga cctccagcac cggcgcgtag agggggatgc gctcgtagag
     1681 ctcgccgtgg gcgagcaggt tgtagatccg ggtcgtgctc gtcccctcga agaggttctc
     1741 gcccggtccg atgccgagtt ccgcctcgag gcgtcggagg tcgtcgtcga gagcgtccac
     1801 caggtccggc tcgagcaccc cctcgagcac ggtgaagccg tgcgcttcga tgcgggcgag
     1861 atggcgttcg acctcgtcgg tcatggcggg atcctagaca ccggcgccgt cggcgaccga
     1921 ggcggtgacc ggcggccacc ccacgtatgc tcccgcggtg actgacacca ccggaagcga
     1981 caacgtccgc cgcccgacgg cgatggacga gttcttcgtc caccagatcc ccgagccgct
     2041 gcccgacgtg gccctgcgca gcccccactg gcgggagagc tacttcttcg acatccacca
     2101 gcccgacgcc gcgggcgacg tcgtgttctt caccatggcc cactatccgg cgcacgagcg
     2161 gatggactcg ctccagatgg gcaaggtcga cggcaagccg gtgatggggg tgctcgcccg
     2221 cccctacgac ggcgatcccc acacgaccga cgtcggcggg gccctggtcg agg
//
LOCUS       DATGJT010000277         2440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1385541, whole genome shotgun sequence.
ACCESSION   DATGJT010000277 DATGJT010000000
VERSION     DATGJT010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1385541"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VKX24_04700"
     CDS             <1..942
                     /locus_tag="VKX24_04700"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07813.1"
                     /translation="SAPSFGGGLSPQLASTVAGLPQVAEATGLGKGVALVGGTAEGIS
                     VADVPALSHLLRLDVAAGTLDGLGDGQLAVSSDAAKARGWHVGSVVAVGFADGTSRDI
                     TVGAVYRSTAVAGDYLLPRATWAPHAPQDTDRLVFVSLRPGVAPAAGEAAVTRAAVPF
                     GRPAVQDRAGYVAAATQRIDMMLGIVYVLLALSILIALMGIANTLALSVHERTRELGL
                     LRAVGQTRAQVRAMLRREAVIVALFGTLGGVGLGVFLGWALVSAAGTDVARLTIPVGR
                     LAAVVVAGAVAGVVAGVRPGRRAARLDVLAAVAADAG"
     gene            1103..1855
                     /locus_tag="VKX24_04705"
     CDS             1103..1855
                     /locus_tag="VKX24_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ07814.1"
                     /translation="MDRLKGKVALITGGGSGMGRASSVLFAREGATVAVVDRADEAGE
                     ETVRLIEAEGGTASFIHADVADAADVENMVEATVKAYGRIDVLFNNAGIEGPSVNLLE
                     YGEEEWARIIAVNLTAVYRAMRAAIPHMIEQGGGVILSTASVAGLVGLARSSAYSAAK
                     AGVIGLSRTVALEYGPRNIRVNCICPGFIATPMLDRVLAGRPEEVLHKVAPLRRVGTA
                     EDIARAALFLASDESSYVTGVPFVVDGGFAAG"
     gene            complement(1891..>2440)
                     /locus_tag="VKX24_04710"
     CDS             complement(1891..>2440)
                     /locus_tag="VKX24_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013674461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07815.1"
                     /translation="LEDEQFNRGFRSRVGFVFQNSDAQVFSPTVREEIAFGPLNMGLH
                     RGVVDFRVADTLELLDIADLADRAPYQLSGGQKKRVAIASVLVMNPDVLLFDEPTAAL
                     DPRTAEWLVDLIVDLNRAGKTIVLATHDLDSLDVLADRCVVFSEDHRLVAQGPPADVL
                     ADRALLESVNLVAPRQPSDRPI"
BASE COUNT          296 a          872 c          928 g          344 t
ORIGIN      
        1 tcggcgccgt cgttcggcgg cgggctgagc ccgcaactgg cctcgaccgt ggccgggctg
       61 ccccaggtgg cggaggccac cgggctcggc aagggcgtgg ccctcgtcgg cgggacggcc
      121 gaggggatca gcgtggccga cgtcccggcc ctcagtcacc tgttgcggct cgacgtcgcc
      181 gccggaacac tggacgggct gggtgacggg cagctcgcag tgtcgtccga cgccgccaag
      241 gcccggggct ggcacgtcgg cagcgtcgtg gcggtgggct tcgccgacgg caccagccgc
      301 gacatcaccg tcggcgccgt ctaccggtcg accgcggtgg ccggcgacta cctgctgccc
      361 cgggcgacgt gggcgcccca cgctccccag gacaccgacc gcctggtgtt cgtctcgctc
      421 cgtcccggcg tcgccccggc cgccggcgag gcggccgtca cccgggcggc ggtgccgttc
      481 ggccggccgg cggtgcagga ccgggccggg tacgtcgccg ccgccacgca acggatcgac
      541 atgatgctcg gcatcgtcta cgtcctactg gcgctgtcga tcctcatcgc cctgatgggc
      601 atcgccaaca cgctggcgct gtcggtccac gagcggacca gggagctcgg cctgctccgg
      661 gccgtcgggc agacccgcgc ccaggtgcgg gccatgctcc ggcgggaggc cgtcatcgtg
      721 gccctcttcg gcacgctggg cggcgtcggc ctcggcgtct tcctgggctg ggcactggtg
      781 tcggcggccg gcaccgacgt cgcccggctc acgatccccg tcggccgcct ggcggcggtc
      841 gtcgtggccg gggcggtggc cggcgtcgtg gccggggtgc ggcccggccg gcgggccgcc
      901 cgcctcgacg tcctcgccgc cgtggcggcc gacgccggct gatcccggcg ccgcccaccc
      961 ccaaccggcg ttcctcacgg cggctctgcg gctgtgagga acgccggttt gtgggtgttc
     1021 ggaactggcg ttcctcaggg cggctatgcg gctgtgagga acgccggttt gttggggccc
     1081 acctggctag cgtctgcgtt ccatggaccg actcaagggc aaggtggcgc tcatcaccgg
     1141 cggcggatcg ggcatggggc gggcgagttc cgtcctcttc gcccgcgaag gggccacggt
     1201 ggccgtcgtc gaccgggccg acgaggcggg cgaggagacc gtccggctca tcgaggccga
     1261 gggcgggacg gcctcgttca tccacgccga cgtggccgac gccgccgacg tcgagaacat
     1321 ggtggaggcg acggtcaagg cctacggccg catcgacgtc ctgttcaaca acgccggcat
     1381 cgagggcccg tcggtcaacc tgctggagta cggcgaggag gagtgggccc ggatcatcgc
     1441 cgtcaacctc accgccgtct accgggcgat gcgggcggcc atcccccaca tgatcgagca
     1501 gggcggcggg gtgatcctca gcaccgcctc ggtggcgggg ctcgtcggcc tggcccgcag
     1561 ctcggcctac tcggcggcca aggccggggt catcggcctg agccggacgg tggcgctgga
     1621 gtacggcccc cgcaacatcc gcgtcaactg catctgcccc gggttcatcg ccacccccat
     1681 gctcgaccgc gtgctggccg gccgccccga agaggtgctc cacaaagtgg cgcccctgcg
     1741 ccgggtcggt accgcggagg acatcgcccg ggccgccctg ttcctggcca gcgacgagtc
     1801 gtcgtacgtg accggcgtcc cgttcgtcgt cgacggcgga ttcgccgccg gctgacgggc
     1861 gggcccggcg tgtcgcggcg gcggccggga tcagatcggc cggtcagatg gctggcgcgg
     1921 cgccacgagg ttgaccgact ccagcagcgc ccggtcggcg aggacgtcgg cgggcgggcc
     1981 ctgcgccacg agccggtggt cttcggagaa gaccacgcag cggtcggcca gcacgtcgag
     2041 ggagtcgagg tcgtgggtgg ccagcacgat cgtcttgccg gcccggttga ggtcgacgat
     2101 gaggtcgacg agccactcgg cggtccgggg gtcgagcgcc gccgtcggct cgtcgaacag
     2161 gaggacgtcg gggttcatga ccagcaccga ggcgatggcc acccgcttct tctggcctcc
     2221 cgagagctgg tagggcgccc ggtcggcgag gtcggcgatg tcgagcagct ccagcgtgtc
     2281 cgccacccgg aagtcgacga cgccccggtg gaggcccatg ttgagcggcc cgaaggcgat
     2341 ctcctcccgc accgtcgggg agaagacctg ggcgtcgctg ttctggaaca cgaagccgac
     2401 gcgggaccgg aagccccggt tgaactgctc gtcctccagg
//
LOCUS       DATGJT010000278         2310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1385639, whole genome shotgun sequence.
ACCESSION   DATGJT010000278 DATGJT010000000
VERSION     DATGJT010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1385639"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VKX24_04715"
     CDS             <1..411
                     /locus_tag="VKX24_04715"
                     /inference="COORDINATES: protein motif:HMM:NF013583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="R3H domain-containing nucleic acid-binding
                     protein"
                     /protein_id="HLJ07816.1"
                     /translation="PATVSARAEGDDDVMVDITGKDLGLLIGPRAATVDAIQELVRTA
                     VQRRIGGHGARIHVDIAGYRARRQEALAEFARQAAQRALESGRDQVFEPMSPVDRKIV
                     HDIVNEIEGVATVSEGEEPRRRVVIKSLANSGSS"
     gene            432..1022
                     /locus_tag="VKX24_04720"
     CDS             432..1022
                     /locus_tag="VKX24_04720"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmG family class I SAM-dependent
                     methyltransferase"
                     /protein_id="HLJ07817.1"
                     /translation="MLGRAQALGFLGPGSVDRHVAHARTLLAGLPEGGRVLDLGAGGG
                     VPGLVVAGFRPELEVTLLDARQRACRFLREAVAALDAAGRVVVVEARAEEAARRPDLR
                     GAFDAVVARSFGPPPVTAECAVGFLRAGGRLVVSEPPDLDAARWPPAGLDALGFGPAA
                     RGGGPDGSFVTIGKVRDDDRWPRRVGVPAKRPLWTA"
     gene            complement(1019..1969)
                     /locus_tag="VKX24_04725"
     CDS             complement(1019..1969)
                     /locus_tag="VKX24_04725"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HLJ07818.1"
                     /translation="MRDLQHRLATLGYETTAAETGVFGETTTAAVRAFQTARGLRVDG
                     ICGRQTWSSLVEAGYRLGDRLLYHRTPMLRGDDVLDLQQKLNALGFDAGRGDGIFGPR
                     TAEALRDFQRNVAAVPDAICGPESIAALERLSRFAGGSIASVREKEALRDGILRLAGR
                     RVYLAVEPGLDALGDVVAKGLIELGAEVLADGSGEDDSMVAAEANRSAADLFLGLRFG
                     DIADWCSCDYFASQASCSEAGRHMARCIAEELSAVLECTPPEPAGRAYAVLRETRMPA
                     VVCQPVRADDVDGVRRLVSRAGAAGRAIVHGVRRGVEEPL"
     gene            complement(2056..>2310)
                     /gene="trxA"
                     /locus_tag="VKX24_04730"
     CDS             complement(2056..>2310)
                     /gene="trxA"
                     /locus_tag="VKX24_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HLJ07819.1"
                     /translation="DFWAEWCGPCKMIAPVLEEIAREQEGKITIGKLNVDDNPDTARR
                     YEVMSIPTLMVFNNGSLEKRLVGARSKGQLMAELAQFIGG"
BASE COUNT          282 a          848 c          882 g          298 t
ORIGIN      
        1 ccggccacgg tgtcggcccg ggccgagggc gacgacgacg tgatggtcga catcaccggc
       61 aaggacctcg gcctgctgat cgggccgcgg gcggcgacgg tcgacgccat ccaggagctg
      121 gtgcggacgg cggtgcagcg ccggatcgga ggccacggcg cccggatcca cgtcgacatc
      181 gcggggtacc gggcccgccg gcaggaggcg ctggcggaat tcgcccgcca ggctgctcag
      241 cgggcgctgg aatcgggccg cgaccaggtg ttcgagccga tgtcccccgt cgaccgcaag
      301 atcgtccacg acatagtgaa cgagatcgag ggcgtggcca ccgtgtcgga gggcgaggag
      361 ccccggcggc gcgtcgtcat caagtcgctg gccaactccg gctcgtcctg agcgacgccg
      421 ccctggccga ggtgctgggc cgggcccagg cgctcggctt cctcgggccc gggtcggtgg
      481 accggcacgt ggcccacgcc cggacgctgc tggccgggct gccggaaggc ggccgcgtcc
      541 tcgacctcgg agccggcggc ggcgtccccg gcctggtcgt ggccggcttt cgaccggagc
      601 tggaggtgac gctgctcgac gcccggcagc gggcctgccg gttcctgagg gaggcggtgg
      661 cggccctcga cgccgccggg cgggtcgtcg tggtcgaggc cagggccgag gaggcggctc
      721 gccggcccga cctgcggggg gcgttcgacg ccgtggtcgc gcggtcgttc ggcccgccgc
      781 cggtgaccgc cgagtgcgcc gtgggcttcc tgcgggccgg gggccgactg gtggtcagcg
      841 agcctccgga tctcgacgcc gcccgttggc cgcccgccgg cctcgatgcc ctgggcttcg
      901 gcccggcggc ccggggcgga gggccggacg gctccttcgt gaccatcggg aaggtccggg
      961 acgacgaccg ctggccccgg cgcgtcggcg tcccggccaa gcgcccgctc tggacggcct
     1021 agagcggctc ctcgacacct cggcgcacgc cgtggacgat ggcccgcccg gcggccccgg
     1081 cccggctcac gagccggcgg acgccgtcga cgtcgtcggc ccggaccggc tggcagacga
     1141 cggccggcat ccgggtctcc cgcaggacgg cgtaggcccg cccggcgggc tcgggcggag
     1201 tgcactcgag caccgccgag agctcctcgg cgatgcagcg ggccatgtgg cggccggcct
     1261 cggagcacga cgcctgggag gcgaagtagt cgcaggagca ccagtcggcg atgtcgccga
     1321 accgcagccc caggaaaagg tcggcggcgg agcggttcgc ctcggccgcc accatcgagt
     1381 cgtcctcgcc gctcccgtcg gcgaggactt cggccccgag ctcgatcaga cccttcgcca
     1441 ccacgtcgcc gagggcgtcg aggcccggct ccacggccag atagacgcgc cggccggcca
     1501 gccggagtat cccgtcccgc agcgcctcct tctcccgcac cgaggcgatc gacccgccgg
     1561 cgaagcgcga cagccgctcc agggcggcga tgctctccgg gccgcagatg gcgtcgggca
     1621 cggcggcgac gttgcgctgg aagtcccgca gggcctcggc ggtgcggggg ccgaagatcc
     1681 cgtcaccccg accggcgtcg aagcccaggg cgttgagttt ctgctgcagg tcgaggacgt
     1741 cgtcgccccg cagcatcggc gtccggtggt agagcagccg gtcccccagc cggtacccgg
     1801 cctcgaccag cgagctccac gtctggcggc cgcagatgcc gtcgacccgg agcccccggg
     1861 ctgtctggaa ggcccgcacg gcggccgtcg ttgtttcgcc gaagacgccg gtctcggccg
     1921 cggtcgtctc gtagcccagc gtggccaggc ggtgctgcag gtcccgcacc gcctcgccct
     1981 cggcccccgg gccgagggtc gcgaatcccc gggggtcccg gggggtcccc cgagactcag
     2041 gggacaaggg cggcctcagc cgccgatgaa ctgggccagc tcggccatga gctgaccctt
     2101 gctgcgggcg ccgaccagcc gcttctccag cgagccgttg ttgaagacca tgagggtcgg
     2161 gatgctcatg acctcgtagc ggcgagcggt gtcggggttg tcgtcgacgt tgagcttgcc
     2221 gatcgtgatc ttcccctcct gctcccgggc gatctcctcg aggacagggg cgatcatctt
     2281 gcaggggccg caccattcgg cccagaagtc
//
LOCUS       DATGJT010000279         2824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_141356, whole genome shotgun sequence.
ACCESSION   DATGJT010000279 DATGJT010000000
VERSION     DATGJT010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141356"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1464)
                     /locus_tag="VKX24_04735"
     CDS             complement(<1..1464)
                     /locus_tag="VKX24_04735"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07820.1"
                     /translation="MISRRPALRRLAPAVLLGGLALVPFTGEYPALIGTLAVVFALVA
                     LSFVILTGWTGDVTLGQVVPYGLGAYGTYVLSDRVGLPVALAVVVAAVATVPLLVVIG
                     TPALRLRGLDLAIATFALALVFQVLAFPAFSRSLAARSGGLTDFSSLVVQVGRPGVLH
                     TNRAFYGAALVIGLILVVAVAALGRSPFGRTLRAVRDDPVRAAAVGIGVGRHRLAAFV
                     LSGVIAAFAGGMVASLRQAITPATFNIFESLNFLAFAVIGGVASPVGAILGGVVGAGL
                     PELTRVDPFRFLQGHLVLVYGGALVLLLAVRPDGLAGLLGWDRRRPAALPEPASPVPR
                     LTGDGDVALLDVEDVVVSYGGVRAVDGVSFAVHEGEAVAVIGPNGAGKSSLFDALSGF
                     VRPSAGAVRLDGRDVTRLRPERRAHDGLGRTFQTARAFPDLTVAENLLAAAHAGGEGR
                     RSPAAVHWLLRRLGLADRADDRPGTLPFGALRILEVGL"
     gene            complement(1461..2342)
                     /locus_tag="VKX24_04740"
     CDS             complement(1461..2342)
                     /locus_tag="VKX24_04740"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ07821.1"
                     /translation="MNLTLTAEAAARGAVVGTGAGLLAVAVVLTFRSTGVLNFALGGV
                     ASVSAFVVWQLWGRGGGLPLVPSVIAALAVSVALGLACERVMRPLASAPVAVRAIATL
                     GLLLLLDGGIVALWGPADRFLPALSSGAVPFGVVRVGSQEIGLAVVAMVAAVAIGVWT
                     RTRPLGMASLAIGEDAAAARLLGVRPERVTAVVWGLSALLAGMAGVGLSGGQGVLNST
                     GMTLALVASLAAVLLGGFERLGITVAAAAGVGALTAAVAVVPSAARVSGLVESTGFLV
                     VLAVVLLRPRRGVVGRA"
     gene            complement(2370..>2824)
                     /locus_tag="VKX24_04745"
     CDS             complement(2370..>2824)
                     /locus_tag="VKX24_04745"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ07822.1"
                     /translation="QQNYKPSPGGYLGQHGIYLDLVPSSCGSFCDGILAPTSLFPPQV
                     PSPATDEMRKVVGRYFSNVDFGYFTELGYVSAKLLVDILHRAGSADRGRVLDVARTLT
                     AYDTGGFTNPAHPVDVSPGREHDRDIILMRMEKGTWKQETGWLTPRKF"
BASE COUNT          455 a         1025 c         1100 g          244 t
ORIGIN      
        1 caggccgact tccaggatgc gcagggcgcc gaacggcaac gtgccggggc ggtcgtcggc
       61 ccggtcggcc agtccgaggc gccgcagcag ccagtgcacg gcggccggcg agcgccgtcc
      121 ctcgccgccg gcgtgggccg ccgccagcag gttctcggcc acggtcagat cggggaaggc
      181 ccgcgccgtc tggaacgtcc ggccgaggcc gtcgtgggcc cggcgctcgg gccggaggcg
      241 ggtgacgtcg cggccgtcga gccgcaccgc tccggcggac ggtcggacga agccgctcag
      301 ggcgtcgaag aggctcgact tcccggcgcc gttgggtccg atgaccgcca ccgcctcgcc
      361 ttcgtggacg gcgaaggaga cgccgtccac cgcccgcacg ccgccgtaac tgacgacgac
      421 gtcctccacg tccagcagcg cgacgtcgcc gtcccccgtc agccggggga cgggggacgc
      481 cggctcgggc agggccgccg gccgccggcg gtcccagccg agcagcccgg ccagaccgtc
      541 gggccggacg gcgaggagca gcaccagcgc gccgccgtag acgaggacga ggtggccctg
      601 caggaagcgg aagggatcga cccgggtgag ctcgggcagc ccggcgccga cgacgccgcc
      661 gaggatggcc ccgaccggcg acgccacacc gccgatgacg gcgaaggcca ggaagttgag
      721 cgactcgaag atgttgaacg tggccggcgt gatggcctgc cgcagcgacg ccaccatccc
      781 gccggcgaag gcggcgatga cgccggagag gacgaaggcc gccagccggt gacggccgac
      841 gccgatgccc accgccgccg cccggacggg gtcgtcgcgc accgcccgca gcgtccggcc
      901 gaacggcgaa cggccgagcg ccgccaccgc cacgaccagg atcaagccga tgacgagcgc
      961 cgcgccgtag aaggcccggt tggtgtgcag gacaccgggc cggccgacct ggaccacgag
     1021 cgacgagaag tcggtgagcc cgccgctgcg ggcggccagc gagcgggaga aggccgggaa
     1081 ggcgaggacc tggaagacga gggccagggc gaaggtggcg atggccaggt cgagaccccg
     1141 cagccgcagc gccggcgtgc cgatgacgac gagcagcggc acggtcgcca ccgccgccac
     1201 cacgacggcc agcgccaccg ggaggccgac ccggtcggag aggacgtagg tgccgtaggc
     1261 gccgagcccg taggggacga cctggccgag ggtcacgtcg cccgtccagc cggtgaggat
     1321 cacgaacgac agcgccacca gggcgaagac cacggctagc gtgccgatca gcgccgggta
     1381 ctcgccggtg aacggcacga gggccaggcc gccgagcagc accgccgggg cgagccgacg
     1441 cagcgccggc cggcgcgaga tcatgcccgg cccaccacgc cgcggcgggg ccggaggagg
     1501 accacggcca gcacgacgag gaacccggtc gattcgacga ggccggagac ccgggccgcc
     1561 gaggggacaa cggccacggc cgccgtcagg gcgccgacgc cggcggcggc ggccacggtg
     1621 atcccgaggc gctcgaaccc gcccaggagg acggcggcca gcgaggccac cagggccagc
     1681 gtcatgccgg tggagttgag gacgccctgg ccgcccgaga ggccgacgcc ggccatcccc
     1741 gccagcagcg ccgagaggcc ccacacgacg gcggtgacgc gctcgggccg cacgccgagc
     1801 agccgggcgg cggcggcgtc ctcgccgatg gccagcgacg ccatgcccag cggccgggtg
     1861 cgggtccaga cgccgatggc gacggcggcc accatggcga cgaccgccaa cccgatctcc
     1921 tgggagccga cgcggaccac tccgaacggg acggcgccgc tggacagcgc gggcaggaag
     1981 cggtcggccg gcccccacag ggccacgatc ccgccgtcga ggagcagcag cagcccgagg
     2041 gtggcgatgg cccggacggc caccggcgcc gaggccaggg gccgcatcac ccgctcacag
     2101 gccagcccca gcgccacgga gacggcgaga gcggcgatca ccgacggcac caggggcagg
     2161 ccgccgcccc ggccccagag ctgccagacg acgaaggcgc tgaccgacgc cacgccgccg
     2221 agggcgaagt tgagcacccc ggtggagcgg aacgtgagca cgacggccac ggccaggagg
     2281 cccgcgccgg tgccgacgac cgctccccgg gcggcggcct cggcggtgag cgtcaggttc
     2341 acgggctcag cggttccggc tcgaccggct cagaacttcc ggggcgtgag ccagcccgtc
     2401 tcctgtttcc aggtgccctt ctccatccgc atcaggatga tgtcccggtc gtgctcccgg
     2461 cccggcgaga cgtcgacggg gtgggcggga ttggtgaagc cgccggtgtc gtaggcggtg
     2521 agggtgcggg cgacatcgag gacccggccc cgatccgcgc tccccgcccg gtgcaggatg
     2581 tcgacgagca gcttggcgct gacgtagccg agctcggtga agtagccgaa gtcgacgttg
     2641 gagaagtacc ggccgacgac cttgcgcatc tcgtccgtgg ccggcgacgg cacctgcggc
     2701 ggaaacaggc tggtgggggc caggatgccg tcgcagaagg agccgcagct cgacggcacc
     2761 aggtcgaggt agatgccgtg ctggccgagg tacccgccgg gcgagggctt gtagttctgc
     2821 tgct
//
LOCUS       DATGJT010000280         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_349235, whole genome shotgun sequence.
ACCESSION   DATGJT010000280 DATGJT010000000
VERSION     DATGJT010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349235"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1124
                     /locus_tag="VKX24_04750"
     CDS             <1..1124
                     /locus_tag="VKX24_04750"
                     /inference="COORDINATES: protein motif:HMM:NF015541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004806 - triglyceride lipase activity
                     [Evidence IEA];
                     GO_process: GO:0016042 - lipid catabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lipase family protein"
                     /protein_id="HLJ07823.1"
                     /translation="LPEPHEDPFYRPPAGWESTAPGTVLATRQVAVNGLGLPVPADSW
                     QFLARSTDAKDAPTTVVGTLMVPKAPYPAGVRPLVSYQPATDSLGDQCNPSYKLRAGT
                     EYELPLMMQALEQGWAVVVSDYEGPQSAFAAGRMAGHGVLDGIRGAEALPGTGLAGVR
                     TPVGLWGYSGGGLASSWAAELQPRYAPELAIAGVASGGTPADMVAAARKIDGTIASGL
                     VLLASTGLTRAYPEMLSLLNDNGRAMVKEIGDMCVGDAVRRFPFRHLDEFTVSADPLS
                     EPVAVAVMEANHLGRQTPRAPVFLYHSIGDELIPFPTVQTLQADWCRGGGHVTLYADG
                     ASEHSSLAVTGAPLAVGFLKARFAGVAVPDNCATAAGSR"
     gene            1121..2086
                     /locus_tag="VKX24_04755"
     CDS             1121..2086
                     /locus_tag="VKX24_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020544719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HLJ07824.1"
                     /translation="MTDEAPTADGVSFTHLDDPLFDGAAATKGDLVAYLDAVADRILA
                     GLADRPLSVVRARPGQAPFMQKNVPKYAPPWLQTVSLWAGTSQRDVAYALCNDRRTLL
                     WFANQRAVEYHPTLIRTQHWDRPTHLVLDLDPPEGDNFRLAVRAAHLVRRALTDSGLD
                     GAVKTSGAKGLHVFVPLDTTVTIGDAAVASRALAARAERLDPGLATTAFIKVDRGGRV
                     FLDSTRSGGATVVAAYSPRIRPGAPVSFPLPWSELDNVAPADFTIHTAVTALGGGDPW
                     AELMPPPQPLPADLVEEGRAIPVARVQAMHEGKRRARARRSPSDP"
     gene            complement(2105..>2335)
                     /locus_tag="VKX24_04760"
     CDS             complement(2105..>2335)
                     /locus_tag="VKX24_04760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07825.1"
                     /translation="HEFFRLLMSAVTDQKVADPGPWDKPDDNSFDPDQFIGNPQGQMN
                     SAGFGKKMENYPAYFSNYAAVPGIFAKNMSTK"
BASE COUNT          309 a          909 c          787 g          330 t
ORIGIN      
        1 ccctgcccga gcctcacgag gaccccttct accggccccc ggccggctgg gagtcgacgg
       61 ctcccggcac cgtcctggcc acccgccagg tcgccgtcaa cgggctcggc ctcccggtcc
      121 ccgccgactc ctggcagttc ctcgcccgct ccaccgacgc caaggacgct ccgaccaccg
      181 tcgtcggcac gctcatggtg ccgaaggcgc cctaccccgc cggcgtccgg ccgctcgtct
      241 cctaccagcc ggccaccgac agcctcggcg accagtgcaa cccgtcatac aagctccggg
      301 ccgggacgga gtacgagctg ccgctgatga tgcaggcgct ggagcagggc tgggcggtcg
      361 tcgtcagcga ctacgaaggg ccgcagagcg ccttcgccgc cggccgcatg gccggccacg
      421 gcgtgctcga cggcatccgg ggcgccgagg cgctgcccgg caccggtttg gccggcgtca
      481 ggaccccggt gggcctgtgg ggctactccg gcggcgggct ggccagcagc tgggccgccg
      541 agctccaacc ccgctacgcc cccgagctcg ccatcgccgg cgtcgcctct ggcggcacgc
      601 cggccgacat ggtcgccgcc gcccgcaaga tcgacggcac catcgcctcc ggcctcgtgc
      661 tgctggcctc caccggcctc acgagggcct acccggagat gctgtcgctc ctcaacgaca
      721 acggccgggc catggtcaag gagatcggcg acatgtgcgt gggcgacgcg gtgcgccgct
      781 tccccttccg ccacctcgac gagttcaccg tctcggccga tccgctgtcg gagcccgtgg
      841 ccgtggcggt catggaggcc aaccacctcg gtcgccagac gccgagggca ccggtgttcc
      901 tctaccactc gatcggggac gagctcatcc cgttcccgac ggtccagacg ctccaggcgg
      961 actggtgccg gggcggcggg cacgtgacgc tctacgccga tggcgccagc gagcactcca
     1021 gcctggccgt gaccggcgca ccgctggccg tcggatttct gaaggcccgc ttcgccggcg
     1081 tcgccgtccc cgacaactgc gccacggccg ccgggagccg gtgaccgacg aggcgccgac
     1141 ggcggacggc gtttccttta cgcatctcga cgacccgctc ttcgacggcg cggcggcgac
     1201 caagggcgat ctcgtcgcct acctcgacgc cgtggccgac cgcatcctgg ccgggctggc
     1261 ggaccgtccg ctgtcggtgg tgcgggcccg accgggccag gcacccttca tgcagaagaa
     1321 cgtgccgaag tacgctccgc cctggctgca gacggtctcg ctctgggccg ggacctcgca
     1381 gcgcgacgtc gcctacgccc tgtgcaacga ccggcggacg ctgctgtggt tcgccaacca
     1441 gcgggcggtg gagtaccacc ccacgctgat ccggacgcaa cactgggacc ggccgaccca
     1501 cctcgtcctc gacctcgacc cgccggaggg cgacaatttc cgcctcgccg tgcgagcggc
     1561 gcacctggtg cgccgggccc tgaccgactc cggcctcgac ggagcggtga agacgagcgg
     1621 cgccaagggg ctgcacgtct tcgtgcccct cgacacgacg gtgacgatcg gcgacgccgc
     1681 cgtcgcctcc cgggcgctgg ccgcccgcgc cgaacgcctc gacccgggcc tggccaccac
     1741 ggccttcatc aaggtggacc ggggcggacg ggtcttcctc gactccaccc gctccggcgg
     1801 ggcgacggtg gtggcggcct acagcccgag gatccggccc ggcgccccgg tgtcgttccc
     1861 tctgccgtgg agtgagctcg acaacgtcgc accggccgac ttcacgatcc acaccgccgt
     1921 caccgccctc ggcggcggcg atccctgggc cgagctgatg cccccgccgc agccgctccc
     1981 cgccgacctc gtcgaggagg gccgggccat ccccgtcgcc cgcgtccagg ccatgcacga
     2041 aggaaagcgc cgggcccggg cccggcgctc cccttctgat ccctgagctg gctgacggcg
     2101 gccgctactt ggtgctcatg ttcttggcga agatccccgg aacggcggcg tagttggaga
     2161 agtacgccgg gtagttctcc atcttcttgc cgaagccggc ggagttcatc tgcccctgcg
     2221 ggttcccgat gaactggtcg ggatcgaagc tgttgtcgtc gggcttgtcc cagggcccgg
     2281 ggtcggcaac cttctggtcg gtcacggccg acatgaggag ccggaagaac tcgtg
//
LOCUS       DATGJT010000281         4523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1487771, whole genome shotgun sequence.
ACCESSION   DATGJT010000281 DATGJT010000000
VERSION     DATGJT010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487771"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VKX24_04765"
     CDS             complement(<1..394)
                     /locus_tag="VKX24_04765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016934609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07826.1"
                     /translation="MTRFVVRRLLQVVPVFFGATFLIFALVYAVPGDPIDALAGDRPV
                     APAVRAELRHRYHLDDPLLVRYGEYLRGLAHGDFGTNFRGRPVSEIMKQRFPVTIRLG
                     LLAFVFEAVVGLAAGVLAGLRRRSLLDNL"
     gene            complement(423..2033)
                     /locus_tag="VKX24_04770"
     CDS             complement(423..2033)
                     /locus_tag="VKX24_04770"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ07827.1"
                     /translation="MLGTGRIVLPSVLLAVALLGCSAGGGIKEAAGVRLADGQVRGGL
                     FSVSAEEPEHLLPANATTTADGQIASALFTGLVEYDPQTAEPRNAMAEAITTTDQRTW
                     TIRIKPGWTFHDGEPVTARSFVDAWNFAAYARNANGNASYFSKVEGYADLQSDHAAAK
                     QLSGLRVIDDTTFTVRLTDSFSQFPVLLGFQAFYPLPRAAYGDLRAYEEAPIGNGPFE
                     MDGRWRHDEFIRLKRFPAYKGRAPSADAVEFRIYSNPDGGYNDLLAGSLDVATEIPPD
                     QLAAAKAEFPHGFVERRSSAFNYLGFPLWDSRFARKELRQAFSLAIDRAAIVKAIYNG
                     TREPARSVINPLVPGSRPDACGLCVFDPARARRLLAAAGGWSGPLDLWFPTSAENQPA
                     IEAVANMLRANLGIGDVRFHVFDFAQFLSLVKARKVDGPFFSNWLMDYPSPQSYLAPL
                     YTAGASTNRTGYANPVVDQRIADGDRAPSLPAAVAAYQAAEDVILDDMPAIPLWFGRT
                     RAVHGDRVTHVAIDPFSRIRVQDVQVVG"
     gene            complement(2089..3695)
                     /locus_tag="VKX24_04775"
                     /pseudo
     CDS             complement(2089..3695)
                     /locus_tag="VKX24_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020549795.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
     gene            3824..4201
                     /locus_tag="VKX24_04780"
     CDS             3824..4201
                     /locus_tag="VKX24_04780"
                     /inference="COORDINATES: protein motif:HMM:NF022684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3040 domain-containing protein"
                     /protein_id="HLJ07828.1"
                     /translation="MGDADEAIVLTEQEREALAGLAAAIGDPWLAGQLVGGGQTPARP
                     KPPSPWLRLAATGWAGLVLLLAGAALAVTTFIHSVLVATLGLVVMGVGLWRFVDQHGD
                     GVMRRLNGRRTPAAGVTPPRTLR"
     gene            complement(4134..>4523)
                     /locus_tag="VKX24_04785"
     CDS             complement(4134..>4523)
                     /locus_tag="VKX24_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HLJ07829.1"
                     /translation="SPTGAGVASSAAAPTHWETAAELARRVLPVLLDSGAGTVLNLNV
                     PNLPVSEVRGLERARLARFGAVQTNVAERGEGYVKVALAEIDAEYEPGTDAALIAAGY
                     ATVTPLSAVCEAASLRLPEFGVRSAGA"
BASE COUNT          612 a         1658 c         1723 g          530 t
ORIGIN      
        1 cgaggttgtc gagcagcgag cggcgccgca gcccggccag cacgccggcg gccaggccga
       61 ccaccgcctc gaagacaaag gccaggaggc cgagccggat cgtgaccggg aagcgctgct
      121 tcatgatctc gctgaccggc cggccccgga agttggtgcc gaagtcgccg tgggccaggc
      181 cccgcaggta ttcgccgtag cggacgagca gcgggtcgtc gaggtggtag cggtgacgga
      241 gctcggcccg caccgccggg gccaccggcc ggtcgccggc cagggcgtcg atggggtcgc
      301 cgggaacggc gtagaccagg gcgaagatga ggaacgtcgc cccgaagaac accggcacga
      361 cctgcaggag ccgacgaacg acgaatctcg tcatcggggg acacccccga acccccgggg
      421 gctcagccga ccacctgcac gtcctggacc cggatgcggc tgaacgggtc gatggccacg
      481 tgggtcaccc ggtcgccgtg gacggcccgg gtccggccga accacagcgg gatggccggc
      541 atgtcgtcga ggatgacgtc ctcggccgcc tggtaggcgg cgaccgccgc cgggagcgac
      601 ggcgcccggt cgccgtcggc gatgcgctgg tcgacgaccg ggttggcgta cccggtgcgg
      661 ttggtgctgg ccccggccgt gtagagcgga gcgaggtagc tctgcgggct cgggtagtcc
      721 atgagccagt tggagaagaa ggggccgtcg actttgcggg ccttgaccag cgacaggaac
      781 tgggcgaagt cgaagacgtg gaagcggacg tcgccgatcc ccaggttggc ccgcagcatg
      841 ttggccaccg cctcgatggc cggctggttc tcggcgctgg tcgggaacca caggtcgagc
      901 gggccgctcc acccgccggc ggcggccagc agccggcggg cccgggccgg gtcgaagacg
      961 cacaggccgc aggcgtcggg ccgggacccg ggcaccagcg ggttgatcac cgaccgggcc
     1021 ggctcccggg tgccgttgta gatcgccttg acgatggccg cccggtcgat ggccagcgag
     1081 aaggcctggc ggagctcctt gcgggcgaag cggctgtccc acaacgggaa gccgaggtag
     1141 ttgaacgccg agctgcgccg ctcgacgaag ccgtggggga actccgcctt cgccgccgcc
     1201 agctggtcgg gcgggatctc cgtggcgacg tcgaggctcc cggccagcag gtcgttgtag
     1261 ccgccgtccg ggttggagta gatccggaac tcgacggcgt cggccgacgg cgcccgcccc
     1321 ttgtaggccg ggaagcgctt gagccggatg aactcgtcgt ggcgccagcg cccgtccatc
     1381 tcgaaggggc cgttgccgat cggcgcctcc tcgtaggccc gcagatcgcc gtaggccgcc
     1441 cggggcagcg ggtagaaggc ctggaacccc agcaggaccg ggaactggct gaagctgtcg
     1501 gtgagccgca cggtgaacgt cgtgtcgtcg atcacgcgaa gccccgagag ctgcttcgcc
     1561 gccgcatggt cggactggag gtcggcgtag ccctcgacct tgctgaagta cgacgcgttc
     1621 ccgttggcgt tgcgggcgta ggcggcgaag ttccaggcgt cgacgaacga ccgggcggtg
     1681 accggctcgc cgtcgtggaa cgtccagccg ggcttgatcc tgatcgtcca cgtccgctgg
     1741 tcggtggtgg tgatggcctc ggccatggcg ttgcggggct ccgccgtctg cgggtcgtac
     1801 tccaccagcc cggtgaacag cgcggaggcg atctggccgt cggcggtggt cgtggcgttg
     1861 gccggcagca ggtgctcggg ctcctcggcc gacaccgaga acaggccgcc ccggacctgc
     1921 ccgtcggcca gccggacgcc ggccgcttcc ttgatgccgc ccccggccga gcatcccagc
     1981 agggcgacgg cgaggagcac gctcggtagc acgatgcggc cggtccccaa cacgaggcca
     2041 ccataggccc ccgccacccg gaggtggccg acctcgcggc gtggagcgct accgccccgg
     2101 gcgggcgaag acccgcggcc ggcggacgcg gtcgtgggcc agggccgccc gcgccgcgtt
     2161 ggccccgcag gcgccgtgga cgccgccgcc gggatgggcc gaggccgacc cgaggtacag
     2221 gccccgcacc ggcgtctcgg cccgggccag gccgggcacc ggccggaaga ccagctgctg
     2281 gtggagctgg gcgctgccgc cgttgacggc gccgccgacg aggttggcgt cggcggcctc
     2341 gagcagcggc ggcgtggcca cgtaccggcc ccggatcagc gaccggaagc ccggcgccag
     2401 tgcctcgatc cgggcctcga tgcgatcggc gaaggcctcg gcctcggcga agtcccaccg
     2461 gcccttgagc tccccgccgg cgtcgccccg cacccgctgc ggcacgtggg tgtaggccca
     2521 ggcggtctcg gtgccggccg ggctgcgggt cgggtcggcc acgcccatct ggcccaccac
     2581 gaggtggggc cgggcgggaa tgaggcccac ggcgagatgg tgggaagcct cgacgaaatg
     2641 ctccatcccc tcggccaggt ggacggtccc cgcccgccgg gccgcctccg ccgtccaggg
     2701 gatcggcccc tccagggccc agtgaccttc accgtggagt tgtcgtactg gaagcggcgc
     2761 aggtcgtcgg ccacacgggc cgggaggtgc tcgacgccga cgaggtcgcg gtacagcgcc
     2821 ggcgcgccga cgtccgccac cacggcccgc cgggccgcca cctcgtcgcc ggcggccgtc
     2881 gccaccgcca ccgcccggcc tccccgcacc accacccggg tcacccgggc gccgcacacc
     2941 acccgcccac cccgggcctc gaggcgggcc accagcgccg ccgtcagccg gccggcgccg
     3001 ccctcgggaa ccgggaagcc gatctgctgc cccagcccgc acagcagcca cccgaacagg
     3061 ctcgaggtgg agctgtcggg ggccaggtcg gtgtgcagcg ccgcgcccgt gaggagcagc
     3121 cctccgcctt cgccggagaa ctcctcctcg gccagccgct ggaccggcag gacggcgaga
     3181 cgggcgaagc gcagcgcccc tcccggcccc agccgggcgg ccaggcggac gcccgcccgc
     3241 accggcggga acggtgtgag cagggcgtcg agcagccgcc cgcccacctc ccgccacagt
     3301 ccgtagaggc gccgccaggc gtcgccgtcg cccggggcct cggcgtcgag cgaccggcag
     3361 gtctcctcca ggtcggtcga cagcaccggg cagcgcccgt cggccagcgg gtgggccagg
     3421 accaggggcg accggcgcca gcgcagcccg tggcgttcga ggtcgaggcc ggtcatcacg
     3481 ggcgacccgg caccgagcgg gtagaaggcg ctgaaccggt cgtggacgaa ccccggcagc
     3541 gtgagctcgc cgctgcggac ggcgccgccg ggatcgggct ccgcctccag gacgacgacg
     3601 ttccagccgg cgtcggccag gaggttggcg gccacgagcc cgttgggccc ggctccgatg
     3661 acgacggcgt cggcggtgtc ctcgtggcgg gtcaagcgac ccagccaata cccccgacgg
     3721 ggggcccgca agccggccgt tccggccgcc ggagagaggg tgtcaccgga cccccggcgg
     3781 ggtactcccc ggaaaagaag cgcgcgtgtc gaggaggacc acagtgggcg acgccgatga
     3841 ggccatcgtg ctgacggaac aggagcgcga ggcgctggcc gggctggccg ccgccatcgg
     3901 cgatccctgg ctggcgggtc agctggtcgg cggcggccag accccggcgc ggccgaaacc
     3961 gccgtcgccc tggctccgcc tcgcggccac cgggtgggcc ggcctcgtcc tcctcctggc
     4021 cggtgcggcg ctggcggtga cgaccttcat ccattccgtg ctggtggcca cgctcggcct
     4081 ggtggtcatg ggcgtcggcc tgtggcggtt cgtcgaccag cacggcgacg gggtcatgcg
     4141 ccggctgaac ggacgccgaa ctccggcagc cggagtgacg ccgcctcgca cactgcgctg
     4201 agcggcgtca cggtggcgta gccggcggcg atcagcgccg cgtcggtccc cggctcgtac
     4261 tcggcgtcga tctcggccag cgccaccttg acgtagccct ctccccgctc ggccacgttc
     4321 gtctgcaccg cgccgaagcg ggccaggcgg gcccgctcca gcccccgcac ctcggagacc
     4381 ggaaggttgg ggacgttgag gttgaggacg gtccccgcgc cggagtccag cagcaccggg
     4441 aggacccgcc gggccagctc ggccgccgtc tcccagtgcg tcggggcggc ggccgacgac
     4501 gccacccccg cgcccgtcgg gga
//
LOCUS       DATGJT010000282         6866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_867647, whole genome shotgun sequence.
ACCESSION   DATGJT010000282 DATGJT010000000
VERSION     DATGJT010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6866
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_867647"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VKX24_04790"
     CDS             <1..252
                     /locus_tag="VKX24_04790"
                     /inference="COORDINATES: protein motif:HMM:NF039585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5915 domain-containing protein"
                     /protein_id="HLJ07830.1"
                     /translation="EGLARELARALNDQRRASGLAIADRIKVRLWTNGLVAEAARRHS
                     DWIAGEVLAVDWQVNPDGSPSGATLDVEGTPVTVALEVA"
     gene            complement(263..1336)
                     /locus_tag="VKX24_04795"
     CDS             complement(263..1336)
                     /locus_tag="VKX24_04795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07831.1"
                     /translation="MLLVSFLLVIVATIFLLSGLFLTKDLALIFISIACSALAGIVLV
                     VAVMRSRPRPSAEPASDGALTPAPAPVAAEAGGERRPVAARPAGGGREFPIPDYDRLE
                     VVEVLPLLGDLEPAELEMVRQREASGRAHPWILARVDALLEAESEADTSEHAWAPGPI
                     GSAGQQGRLMDDADEAGAEIAEVEPDDVDWASPRDRDWAASDFELDSGADYADVSPSS
                     ARDFPIDRYDQLRVTEILPLLPGLGAEDLKMVREEEAAGKARASILARIDGLLAREGG
                     AARPAPAPAAKPSRAAAKAPSRAAAGLPIDGYDGLTVPQIQARLTGLSAADLRKLRTY
                     EQRHKNRAGVLQRIEGALKQAPR"
     gene            complement(1430..2209)
                     /locus_tag="VKX24_04800"
     CDS             complement(1430..2209)
                     /locus_tag="VKX24_04800"
                     /inference="COORDINATES: protein motif:HMM:NF016959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HLJ07832.1"
                     /translation="MDVTPHDLRNAELREAFRGYRPEEVEELLERAAVTLERMHERNR
                     QLQEKIASLEAEGSTAKEMESVLRQTLLLAQRTADETVTTAHERSRRLVEEAEDRALT
                     LTSEAEEQARIVGEAQRQKYEAIVAELSARRDLLTLDIDALERVQADYRGRLRAILEK
                     ELEDLDRRAALPPPARPELHEIDLSTVPAPPEPTASEDLEPEVVEPPVAAPSGRGAGS
                     MFQRPAEGAEGGPPTEALVVLDDDELAEPGPPAGASARRRL"
     gene            complement(2285..2542)
                     /locus_tag="VKX24_04805"
     CDS             complement(2285..2542)
                     /locus_tag="VKX24_04805"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HLJ07833.1"
                     /translation="MRLLCSLINVYYIVLFAYIILSWFPIQPGTALASIASILHQLVE
                     PVLGPVRRLIPSIGMIDISPIVVFFGLQIIQNAVLHCGSVA"
     gene            complement(2555..3013)
                     /gene="sepF"
                     /locus_tag="VKX24_04810"
     CDS             complement(2555..3013)
                     /gene="sepF"
                     /locus_tag="VKX24_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012934991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HLJ07834.1"
                     /translation="MWRRAMVYLGLVDDPDDEDGVGPASRAPDPGPNVRPLSRDEPAP
                     APAVRPSVVRTMPSASTAARVHVVEPRGFNDAQEVGDRLKANQPVILNLQGLDRDLQR
                     RLIDFSSGLAYALGGSMSRVADQVFLLTPSNVEVSQEEKERLQARGLFRA"
     gene            complement(3100..3780)
                     /locus_tag="VKX24_04815"
     CDS             complement(3100..3780)
                     /locus_tag="VKX24_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020741349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HLJ07835.1"
                     /translation="MTAAVGAADAVTRPEDVAARLQAVRDRVADAAGRAGRPASAVRL
                     VVVTKGVPPPVMQAAYDAGAADFGENRAQELLAKAPQIEGRPTWHFIGRLQRNKVAGL
                     APLVDLWQSVDRIELGQDIAGRAPGAAVLAEVNVSGDPAKAGVATADAARLVDGLRSA
                     GLSVGGLMTIPAAGEDPRPAFARLAALADRLGLAELSMGMSDDFEVAVEEGATIVRVG
                     RAIFGPQR"
     gene            complement(3777..4508)
                     /locus_tag="VKX24_04820"
     CDS             complement(3777..4508)
                     /locus_tag="VKX24_04820"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HLJ07836.1"
                     /translation="MWIRLGLDGAEILFSDRTGGVSAPPFDTANAGYGRGDDPARVDE
                     NRVRIGAALGGVAADPAKWISLHQVHGASVYAADEDGPTHGRPAPRADAAVSAESGAV
                     LSVLTADCGPVALVAPGVVAAVHAGWRGLAAGVIEAAVAEVRRRSSGPVRAVVGPCIH
                     PECYEFSPADLQPIVDRLGPDVAGSTAAGRPALDVPRAIRLALAGAGVDDVTDVDVCT
                     ACSPDHFSHRRDGRTGLQAMLVAAR"
     gene            complement(4522..5616)
                     /gene="ftsZ"
                     /locus_tag="VKX24_04825"
     CDS             complement(4522..5616)
                     /gene="ftsZ"
                     /locus_tag="VKX24_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004955836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HLJ07837.1"
                     /translation="MGAPQNYLAVIKVVGVGGGGCNAVNRMVDAGLKGVEFIAINTDA
                     QALLQSEADVKLDIGRQLTRGLGAGSDPEVGRLAAEEHRDEIQEVLKGADMVFITAGK
                     GGGTGTGGAPVIAEIGKSLGALTVGVVTRPFAFEGRKRSMQAEDGIRKLKEKVDTLIV
                     IPNDRLLQVVDDKTALTSAFKAADEVLLQGVQGITDLITTPGLINTDFADVKMIMTNA
                     GSALMGIGLAAGEGRGVAAARAAVSSPLLEAGIEGARGILLSIAGPPDLSLHEVNEAC
                     ELIAQAAHPDANIIFGTIIDDGLGDSVRITVVAAGFDRFDGERPRATERRVVDLRYHD
                     EETGALDELDVRQEELAEDEFDVPSFINRP"
     gene            complement(5930..>6866)
                     /locus_tag="VKX24_04830"
     CDS             complement(5930..>6866)
                     /locus_tag="VKX24_04830"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HLJ07838.1"
                     /translation="EGWRARLPGALQRPLAWQAPVAGRAVAGAGKAARRSLSATRSLR
                     DRLRRMTRWLPQTLLGRVLVAVAAILLFTGATWVTTRSPLLAVQHIEVSGGTVVTPQE
                     AITGAGLRRGEPMLDVDTGGAERRLLRLPWVATATVERGFPNTVKIHVTERTATAVAA
                     RPAGGWVLLDATGRVLAERPDRPAGLAEVIGAGAPPAPGAGFGAAGPALEVVAALPGE
                     LRKQVTDATLAGDAVTLHTGSREIRIGPPTQLPAKVAALSVLLARVGNRSVAAVDVRV
                     PQAPVVVPTAATPATSTPAPGWGAPGPLVPGKAKD"
BASE COUNT          896 a         2523 c         2531 g          916 t
ORIGIN      
        1 gaaggcctgg cccgggagct ggcccgggcg ctcaacgacc agcgcagggc cagcgggctg
       61 gccatcgccg accgcatcaa ggtccgcctc tggacgaacg ggctcgtggc cgaggcggca
      121 cggcgccaca gcgactggat cgccggcgag gtcctggccg tcgactggca ggtgaacccc
      181 gacggcagcc cgtccggcgc caccctcgac gtcgagggca cgccggtgac cgtggccctc
      241 gaagtcgcct agagggaccg gcctagcggg gggcctgctt cagcgcgccc tcgatccgct
      301 ggaggacccc ggcccggttc ttgtgccgct gctcgtaggt ccgcagcttg cgcaggtcag
      361 cggcgctgag cccggtgaga cgggcctgga tctgggggac ggtgagcccg tcgtagccgt
      421 cgatcggcag gccggccgcc gctctcgacg gcgccttggc cgctgcccgg gagggtttgg
      481 ccgccggcgc cggcgccgga cgggcggcgc cgccctcgcg ggccagcagc ccgtcgatcc
      541 gggccaggat gctggcccgg gccttcccgg ccgcctcctc ctcccggacc atcttcaggt
      601 cctcggcgcc gaggccgggc agcagcggga ggatctcggt gacccgcagc tggtcgtagc
      661 ggtcgatcgg gaagtccctc gccgaggacg gggacacgtc ggcgtagtcg gccccggagt
      721 cgagctcgaa gtcggacgcc gcccagtcgc ggtcccgggg cgaggcccag tcgacatcgt
      781 cgggttcgac ctcggcgatc tcggcgccgg cctcgtcggc gtcgtccatg agccggccct
      841 gctgcccggc cgagccgatg gggccggggg cccaggcgtg ctccgacgtg tcggcctcgg
      901 actcggcctc caggagggcg tcgacccggg cgagaatcca ggggtgggcc cggcccgagg
      961 cctcccgctg gcggaccatc tcgagttcgg cgggctcgag gtcgccgagc agcggcagca
     1021 cctcgacgac ttccagccgg tcgtagtcgg gaatcgggaa ctcccggccg ccgccggccg
     1081 ggcgggcggc gaccggccgt cgctcgcccc cggcctcggc ggccacgggc gccggcgccg
     1141 gcgtcagggc gccgtcggag gcgggctcgg cgctgggccg cggtcggctc cgcatgacgg
     1201 cgacgacgag cacgatcccg gccagggccg agcaggcaat cgagatgaag atgagcgcca
     1261 gatccttggt gaggaacagc cccgacagga gaaagatcgt ggcgacgatc accaggagga
     1321 agctcacgag gagcacgagc gcaccgccct cggtatggct atgaccacga aagatggtag
     1381 cggcggactc tacccggcag ggtgatctcg gtagataccg cgccggccgt cagaggcggc
     1441 ggcgggcgct cgctccggcg ggcgggccgg gctcggccag ctcgtcatcg tcgagcacca
     1501 ccagcgcctc ggtcggcggg ccgccctcgg ccccctcggc cggacgctgg aacatcgacc
     1561 ccgccccgcg acccgacggc gcggcgacgg gcggctcgac gacctccggt tccagatcct
     1621 cggaggccgt cggctcgggc ggggccggca ccgtcgacag gtcgatctcg tggagctccg
     1681 gccgcgccgg cggcgggagc gccgcccgcc ggtcgaggtc ctccagctcc ttctccagga
     1741 tcgcccgcag acggccgcgg tagtcggcct ggacgcgctc gagggcgtcg atgtcgagcg
     1801 tcagcaggtc gcgccgggcc gacagctcgg cgacgatcgc ctcgtacttc tggcgctgcg
     1861 cctcgcccac gatgcgggcc tgctcctcgg cctcgctggt cagcgtgagc gcccggtcct
     1921 ccgcctcctc gacgaggcgg cgggacctct cgtgggcggt ggtgactgtc tcgtcggcgg
     1981 tccgctgggc caggaggagc gtctggcgga gcacgctctc catctccttg gccgtcgaac
     2041 cctcggcttc cagcgaggcg atcttctcct gcagctgccg gttgcgctcg tgcatgcgct
     2101 cgagggtgac ggccgcccgc tcgaggagct cttcgacctc ttcgggccgg tagccccgga
     2161 aggcttccct cagctcggcg ttccggagat catgaggggt gacgtccata ggccgatcct
     2221 aacgatcaac cacccggtcg gggtggaccc agccactgcc agtggtcagg gcgcgcgacg
     2281 gtactcaggc cacgctgccg cagtgcagca cggcgttctg gatgatctgg agcccgaaga
     2341 acacgacgat cggcgagatg tcgatcatgc cgatgctcgg gatgagccgc cgcacggggc
     2401 cgagcaccgg ctcgacgagc tggtggagga tcgaggcgat cgaggccagc gccgtccccg
     2461 gctggatggg gaaccacgac aggatgatgt aggcgaacag gacgatgtaa tagacgttga
     2521 tgagcgagca gaggagcctc aaggcggcgg cggctcaggc ccggaacagg ccccgggcct
     2581 ggaggcgctc cttctcctcc tgggagacct cgacgttcga cggggtgagc aggaacacct
     2641 ggtcggccac ccgggacatc gacccgccga gggcgtaggc cagcccgctg gagaagtcga
     2701 tcagccggcg ctggaggtcg cggtcgaggc cctgcaggtt gaggatcacc ggctggttgg
     2761 ccttgagccg gtcgcccacc tcctgggcgt cgttgaagcc gcggggctcg acgacatgga
     2821 cgcgcgccgc ggtggaggcg gagggcatcg tccgcaccac gctcggccgg acggccggcg
     2881 ccggggccgg ctcgtcgcgg ctcaacggcc ggacgttggg gccgggatcg ggagcgcggg
     2941 aggcggggcc gacgccgtct tcgtcgtcgg gatcgtcgac gaggcccagg tacaccattg
     3001 cccgtcgcca catcgcagcc atcgaactgc cctccttctc cggcgagccc tatcgttgca
     3061 cggctgggcc cggcgatcgg ggattcatgc catccctgat catctctgcg ggccgaagat
     3121 cgcccggccg acccgcacga tcgtcgctcc ctcttccacc gccacctcga agtcgtcgct
     3181 catccccatc gacagctcgg ccagcccgag ccggtcggcc agcgccgcca gccgggcgaa
     3241 ggccggccgg ggatcctccc cggcggccgg gatcgtcatc aggcccccga ccgacagccc
     3301 ggccgagcgc agcccgtcga ccaagcgggc ggcgtcggcg gtggccacgc cggccttggc
     3361 cgggtcgccg gacacgttga cctcggccag caccgccgcc cccggcgccc gcccggcgat
     3421 gtcctggccg agttcgatcc ggtcgaccga ctgccacagg tcgaccagcg gcgccagccc
     3481 ggcgaccttg ttgcgctgca gccgcccgat gaagtgccag gtggggcggc cctcgatctg
     3541 cggcgccttg gccagcagct cctgggcccg gttctcgccg aagtcggcgg ccccggcgtc
     3601 gtaggccgcc tgcatcaccg gcggtggcac ccccttcgtc acgaccacca gccggacggc
     3661 cgaggccggg cgcccggccc ggcccgcggc atcggccacc cggtcacgca ccgcctgcag
     3721 gcgggcggcc acgtcctccg gacgggtcac cgcatcggcg gcgccgacgg ccgccgtcac
     3781 cgcgccgcca ccagcatcgc ctgcagcccg gtgcggccgt cgcgccggtg ggagaagtgg
     3841 tcgggcgagc aggccgtgca gacgtcgacg tcggtgacgt cgtccacgcc ggcgccggcc
     3901 agggccaggc ggatagcccg ggggacgtcg agcgccggcc ggccggcggc ggtggagccg
     3961 gccacgtcgg gcccgagccg gtcgacgatc ggctggaggt cggcgggcga gaactcgtag
     4021 cactcggggt ggatgcacgg cccgaccacc gcccggacgg gcccgctcga ccggcgccgg
     4081 acctcggcca cggccgcctc gatcacgccg gcggcgaggc cccgccagcc ggcgtggacg
     4141 gcggccacga ccccgggcgc caccagcgcc accggcccgc agtcggcggt caacaccgag
     4201 agcaccgcgc cggactcggc gctcaccgcg gcgtcggccc gcggcgccgg ccgcccgtgc
     4261 gtgggcccgt cctcgtcggc ggcgtagacg gacgcgccgt ggacctgatg gagcgagatc
     4321 cacttcgccg gatcagcggc gacgccgccg agcgccgcgc cgatgcggac ccggttctcg
     4381 tcgacccggg cggggtcgtc accccgcccg tagccggcgt tggccgtgtc gaacggtggt
     4441 gccgagaccc ctccggtccg gtcactgaag aggatctcgg ccccgtcgag cccgaggcgg
     4501 atccacacgg ttgtcgggcc gttacggccg gttgatgaac gaggggacgt cgaactcgtc
     4561 ctcggcgagc tcctcctggc gcacgtcgag ctcgtcgagc gcgcccgtct cctcgtcgtg
     4621 gtagcggaga tcgaccaccc gccgctcggt ggcccggggc cgctcgccgt cgaaccggtc
     4681 gaacccggcc gccaccaccg tgatccgcac gctgtcgccg agaccgtcgt cgatgatcgt
     4741 gccgaagatg atgttggcgt cggggtgggc ggcctgggcg atgagctcgc aggcctcgtt
     4801 gacctcgtgc agcgagaggt cgggcgggcc ggcgatgctg aggaggatgc cgcgggcgcc
     4861 ctcgatgccg gcctccagca gcgggctcga cacggcggcg cgggcggcgg cgacgccccg
     4921 gccctcaccg gcggccaggc cgatgcccat cagtgccgag ccggcgttgg tcatgatcat
     4981 cttcacgtcg gcgaagtcgg tgttgatgag gcccggcgtc gtgatgagat cggtgatgcc
     5041 ctgcacgccc tggagcagca cctcgtcggc cgccttgaag gcactggtca gcgccgtctt
     5101 gtcgtcgacg acctggagca gccggtcgtt ggggatgacg atcagggtgt cgaccttctc
     5161 cttcagcttc cggatgccgt cctcggcctg catcgaccgc ttgcggccct cgaaggcgaa
     5221 cggccgggtc acgacgccga ccgtcagcgc gccgaggctc ttgccgatct cggcgatgac
     5281 gggggcgccg cccgtccccg tgccaccgcc cttcccggcg gtgatgaaca ccatgtcggc
     5341 ccccttgagg acctcctgga tctcgtcgcg gtgttcctcg gcggccagcc ggccgacctc
     5401 ggggtccgac ccggcgccga ggccccgggt cagctggcgg ccgatgtcga gcttgacgtc
     5461 ggcctcgctc tgcagcaggg cctgggcgtc ggtgttgatg gcgatgaact cgacgccttt
     5521 caagccggcg tcgaccatcc ggttcaccgc gttgcatccg ccgccgccga cgccgacgac
     5581 cttgatcacg gccaggtagt tctgaggagc gcccaccatc gcaaaccttc tctcgtactc
     5641 gtggctttcc agccggcccg ctcttgttcc ggcctcccct cgcggcgcct acggcgacgc
     5701 gacctacctg gccggtgtgt cagaaacgct tgtcctgcaa ccggatctcg gggacacccc
     5761 gaacccccgg gcagcaatcc agcagtgatg cgacaacgag gcctgcatgg ccccgtccca
     5821 gcggttgaag ctcaacttga gcctgaacga ggggtgaacc tgcggttggc gccgagactc
     5881 taaaccagtc gcgtcgaacg gtgcaattgc cgcgaaccct tgtggggctt caatctttcg
     5941 cctttccggg cacgagcgga ccgggcgccc cccagcccgg tgcaggggtg ctggtcgcgg
     6001 gggtcgcagc ggtcggcacg accaccggag cctgggggac gcgcacatcg acggcggcca
     6061 ccgagcggtt ccccacccgg gccaggagga cgctcagcgc ggccaccttg gccggcagct
     6121 gcgtcggcgg accgatgcgg atctccctcg accccgtgtg gagggtgacg gcgtcaccgg
     6181 ccagcgtggc gtcggtcacc tgcttgcgga gttcgccggg cagggcggcg accacctcga
     6241 gggcgggacc ggcggccccg aatccggccc ccggcgcggg cggagccccg gcgccgatca
     6301 cctcggcgag gccggcgggc cggtcgggcc gctcggccag gacccggccg gtggcgtcga
     6361 ggagcaccca gccgccggcc gggcgggcgg cgacggcggt cgcggtccgt tcggtgacgt
     6421 ggatcttcac cgtgttcggg aaaccccgct cgaccgtcgc cgtcgccacc cagggcaggc
     6481 ggaggagccg gcgttcggct ccgccggtgt cgacgtcgag catgggttcg ccgcgccgga
     6541 gtccggcgcc ggtgatcgcc tcctgcgggg tgacgacggt tccgccggag acctcgatgt
     6601 gctggacggc cagcaggggt gagcgcgtcg tcacccacgt cgccccggtg aagaggagga
     6661 tggcggccac cgccaccagg acccggccga gtagcgtctg ggggagccac cgggtcatcc
     6721 gccgcagccg gtcccgcagc gaccgggtgg cgctgagact ccgtcgtgcg gccttgccgg
     6781 cgccggccac agcccggccc gccaccggcg cctgccacgc cagcggccgc tgcagcgctc
     6841 ccgggagcct ggccctccac ccttcc
//
LOCUS       DATGJT010000283         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_970986, whole genome shotgun sequence.
ACCESSION   DATGJT010000283 DATGJT010000000
VERSION     DATGJT010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970986"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VKX24_04835"
     CDS             complement(<1..255)
                     /locus_tag="VKX24_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07839.1"
                     /translation="MGGGSAADIGLVVAGAGGSGAVEDVVVDAAAVVVVVPGGAVVAT
                     GAGRVVAVGRAVVFVAGGAVVAGAGGGDDATRPEFGSATSD"
     gene            complement(381..1187)
                     /locus_tag="VKX24_04840"
     CDS             complement(381..1187)
                     /locus_tag="VKX24_04840"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ07840.1"
                     /translation="MPQVQHVGMFTMVDALEDPGVFIGLLDRIQDAPDVRGARADLLD
                     RLALQPGDAVLDLGCGTGDHTREVAALVAPDGGVVGVDFSTKMIAEATRRQAASGVPA
                     TFEQGDAQKLRFTTGTFDACRTERMLCHVPDCDAALREMARVVRPGGRIGVIDVDTAG
                     VMIDSADGAITAAFAASMTDTIQNPWIGRTLRRRMAEVGLVDVVVEPRVVEIGYGAIE
                     PMIDAHIVLIQEAGLDAAAVEAWKRELEYANLAGTFFMAMTMFLATGRKA"
     gene            1358..1546
                     /locus_tag="VKX24_04845"
     CDS             1358..1546
                     /locus_tag="VKX24_04845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07841.1"
                     /translation="MQGEDTGSEALDQITKIRPAVDRLRELLTSATVLDLQATARGYW
                     AERRRQTESGGAERPAAI"
     gene            complement(1543..2367)
                     /locus_tag="VKX24_04850"
     CDS             complement(1543..2367)
                     /locus_tag="VKX24_04850"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013884371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ07842.1"
                     /translation="MTPTGDRYIHGHSDSVLRSHRWRTAENSAGYLLPHLADGLRLLD
                     VGCGPGTLTVDLARRVAPSGEVVGVDISDSVVAEATAHAAEAGAANVTFRAGDFRGIG
                     LAERSFDVVHAHQVLQHLRDPVGALAAMAGLARPGGIVAARDADYGAFLWTPADSRLD
                     RWREIYTAVSRRIGVAADAGRWLLRWALDAGLDDVAYTTSTWTFASPADRAWWGDLWA
                     ERTVASSLADQALEYGVADRAELEAVAGGWRDWAARPDGTFVLLHGEIVARVPSAA"
     gene            2396..>2607
                     /locus_tag="VKX24_04855"
     CDS             2396..>2607
                     /locus_tag="VKX24_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011437451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ07843.1"
                     /translation="MATAPLPPVERVRPGVWSIPVPIPNNPLRYVLVYAFETDAGIYL
                     VDAGWNTDEAFDTLAAGLTAVGASVG"
BASE COUNT          339 a          968 c          983 g          317 t
ORIGIN      
        1 gtcgctggtg gccgacccga actccggacg ggtggcgtcg tccccgcctc cggcgccggc
       61 gaccaccgcg ccgccggcga cgaacacgac cgcccgtccg acggccacga cccgtccggc
      121 gccggtggcg accacggctc cgcccggcac gaccacgacg acggccgccg cgtccacgac
      181 gacgtcctcg accgcgccgg agccgccggc gccggcgacc acgagcccga tgtccgccgc
      241 gctccctccg cccaccggcg gggcgcgcca cggttccgac gggtcgacgt cgcggtggct
      301 gtggctggtt ccggtggccg ccgggcccgt cgggctgtgg tggggccgga agctggggag
      361 gccgcgccgg ccctgagcct tcaggctttg cggccggtgg ccaggaacat cgtcatggcc
      421 atgaagaacg tgccggccag gttggcgtac tccagctccc gcttccaggc ctccacggcg
      481 gcggcgtcga ggcccgcctc ctggatgagc acgatgtggg cgtcgatcat cggctcgatg
      541 gcgccgtagc cgatctcgac cacccggggc tcgacgacca cgtcgacgag gccgacctcg
      601 gccatgcgcc ggcgcagcgt ccgcccgatc caggggttct ggatggtgtc ggtcatggac
      661 gccgcgaagg cggcggtgat ggccccgtcg gcgctgtcga tcatgacacc ggcggtgtcg
      721 acgtcgatga cgccgatgcg gccgccgggc cgcacgaccc gggccatctc ccgcagggcg
      781 gcgtcgcagt cgggaacgtg gcagagcatc cgctccgtcc ggcaggcgtc gaaggtgccg
      841 gtggtgaagc gcagcttctg ggcgtcgccc tgctcgaacg tcgccggcac cccgctcgcc
      901 gcctgacggc gcgtggcctc ggcgatcatc ttggtgctga agtccacgcc gaccaccccg
      961 ccgtcggggg cgacgagcgc cgccacctcc cgggtgtggt cgccggtgcc gcagccgagg
     1021 tcgaggacgg cgtcgccggg ctgcagcgcc agccggtcca gcaggtcggc ccgggcgccc
     1081 cggacgtcgg gggcgtcctg gatccggtcc agaagcccga tgaagacgcc gggatcctcg
     1141 agggcgtcga ccatcgtgaa cattccgacg tgctggacct gcggcatctc ccactccttc
     1201 cacgccgtgc gggggccacg gcctgcggaa cggtagccgc cggtcggggg ccgcccccag
     1261 tcagaaagcc atcggtgacc gtgtttgggc cgccggcgga ccgggtacac cggcccctcg
     1321 acaccaccgt gttcacgcgc ttcaacaggg aggcgcaatg cagggggagg acaccgggag
     1381 cgaggccctc gaccagatca ccaagatccg tccggcggtc gaccggctgc gggagctgct
     1441 gacgtcggcc acggtcctcg atctccaggc caccgcccgc gggtactggg ccgaacggcg
     1501 gcggcagacc gagtcgggcg gcgccgaacg gccggcggcg atctaagcgg cggagggcac
     1561 gcgggcgacg atctcgccgt ggagcaggac gaacgtgccg tccggccggg cggcccagtc
     1621 ccgccacccg ccggccaccg cctcgagttc ggccctgtcg gcgacgccgt actccagcgc
     1681 ctggtcggcc aggctggagg cgacggtccg ctccgcccac aggtcgcccc accacgcccg
     1741 gtccgcggga ctggcgaacg tccacgtcga ggtggtgtag gcgacgtcgt cgaggccggc
     1801 gtcgagcgcc cagcggagca gccaccggcc ggcatcggcg gcgacgccga tgcggcggct
     1861 caccgcggtg tagatctccc gccaccggtc gaggcgggag tcggccggcg tccacaggaa
     1921 ggcgccgtag tcggcgtcgc gggcggcgac gatgccgccc ggccgggcga ggccggccat
     1981 ggcggccagg gcgccgaccg ggtcccggag gtgctggagc acctggtggg cgtggacgac
     2041 gtcgaaggag cgttccgcca ggccgatccc ccggaagtcg ccggcccgga acgtcacgtt
     2101 ggccgccccg gcctcggcgg cgtgggccgt cgcctcggcc acgacggagt cggagatgtc
     2161 gaccccgacc acctcgccgg acggcgccac ccgccgggcg aggtcgacgg tcagcgtgcc
     2221 cggcccgcag ccgacgtcga gcaggcgcag cccatcggcc agatggggaa gcaggtagcc
     2281 ggccgagttc tcggcggtgc gccagcggtg ggagcgcagg acggagtcgg agtggccgtg
     2341 gatgtagcgg tcgccggtcg gggtcacggg cggggattgt ggcacgctct cggtcatggc
     2401 cactgctccg ctcccgccgg tcgagcgggt gcggccgggg gtgtggagca tccccgtgcc
     2461 catccccaac aacccgctgc gctacgtcct cgtctacgcc ttcgagaccg acgccgggat
     2521 ctacctcgtc gacgccggct ggaacaccga cgaggccttc gacacgctcg ccgccgggct
     2581 gaccgccgtc ggcgcctcgg tgggcga
//
LOCUS       DATGJT010000284         4805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_868095, whole genome shotgun sequence.
ACCESSION   DATGJT010000284 DATGJT010000000
VERSION     DATGJT010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4805
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868095"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..179
                     /locus_tag="VKX24_04860"
     CDS             9..179
                     /locus_tag="VKX24_04860"
                     /inference="COORDINATES: protein motif:HMM:NF013875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07844.1"
                     /translation="MATAKTCPHGPGDRVVLSGAEVRRRLSSGEPLPPEFSRPEVAEV
                     LRAAFADAGTSG"
     gene            222..1886
                     /locus_tag="VKX24_04865"
     CDS             222..1886
                     /locus_tag="VKX24_04865"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014374786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HLJ07845.1"
                     /translation="MPRFGEGQWALGYHEPLNKNERAKRDDDGLNVRARIETVYSKQG
                     FRSIWPDDLRGRMRWWGLYTQRRQGVPAGSTATAEPQELEDEFFMLRIRNAGGRMTSE
                     QLRAIAWVSERFGRDVADVTDRQNIQLHWIRIEDVPRIWEKIESVGLTSCEACGDTPR
                     AFLGCPVAGVGREEIFDATPDLMATHQRFVGDPSFSNLPRKFKTSISGCAQQCAAHEI
                     NDVSFVGVLRDGWGSTGGSEAGYDLWVGGGLGSNPKFGKRLGVFVEPYQVPEVWAGVA
                     GVFRDYGYRRARNHARLKFLMADWGPEKYREILEKQYLGYALPDGEPAPATTTAQRDH
                     VGVFEQKDGNCYVGFAPRAGRIYGHQLRLVADLADRFGGGMVMATTQQKLVITGVGPT
                     SVDELVASLNDLDLLVNPSPFRTGTMSCTGIEFCKLALVETKHRADWLYRELEERLPE
                     FTDPIRININGCPNACARFQLADIGFMGSVGHATDGTKVDVFQVHVGGHLGQDHAFGR
                     KVKRLKVPGSELANYCERLLRRFQATRRPDEPFHRWAARAPEDWLL"
     gene            1883..2464
                     /gene="cysC"
                     /locus_tag="VKX24_04870"
     CDS             1883..2464
                     /gene="cysC"
                     /locus_tag="VKX24_04870"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006622469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HLJ07846.1"
                     /translation="MSDLVEEAVVPSRARADRGVVIWLTGLPSSGKSTIAAALLPALR
                     ARGERVEVLDGDVVRENLSRGLGFSKEDRDINIRRIGFVAELLARNGVKVITAAISPY
                     RAIRDEVRALAGERFLEVYVATPLEVCESRDVKGLYAKARSGQLKGFTGIDDPYEPPL
                     APEVEIAAHTETVEESAARIIDALQARGYLDAD"
     gene            2454..3161
                     /locus_tag="VKX24_04875"
     CDS             2454..3161
                     /locus_tag="VKX24_04875"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010226163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HLJ07847.1"
                     /translation="MPTDLAATSPATPAPELPDLDDASAEYVMTWAIERYFPEIAVAC
                     SMQDAVVVDLAWRIEPRIEVFFLETGFHFPETLHTAERMRSRYQLNLVAIPPVENPAV
                     YSKDGYEACCAARKVKPMDRYLTGKRAWVTGLRRTEATTRAGARAVEWDGKRSLVKVN
                     PIVAWSDEQVDRYIAEHDLIVNPLRLEGYDSIGCWPCTKAGKGREGRWAGLEKTECGL
                     HVAAAHTPGHPEAAPTA"
     gene            3164..3370
                     /locus_tag="VKX24_04880"
     CDS             3164..3370
                     /locus_tag="VKX24_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006602344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07848.1"
                     /translation="MSELDSPRVQPFYCPYCAEEDIVPCGALDDPPGGYHCRSCDRRY
                     HLRYLGSGPGAPSAHPASKEAATS"
     gene            3367..>4805
                     /gene="cysG"
                     /locus_tag="VKX24_04885"
     CDS             3367..>4805
                     /gene="cysG"
                     /locus_tag="VKX24_04885"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF007922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HLJ07849.1"
                     /translation="MSFRYPVTLDLDGRRCVVIGGGPGAEGKIDGLLESGAEVTVVGV
                     TVTDGIAALAAAGRISWLRRPYAAGDLDGAMLAIAATGAPEINARIHADARRARVLLN
                     ALDDVAHCDFAAPATVRRGDLTIAVSTAGKAPALARRLRERLSQEFGPEWGRLVEVLG
                     DARAAVGKRTTDFPTWAERWSRALDQDLIGLIRSGDEAAVVDALRRALAGEPAAGSSA
                     ESTAGPPAEPTAGPPAEPTAEPTAGSSRGSVAIVGAGPGDPDLITVRGKALVEAADVV
                     VYDRLVHPSLWAGRTAIDAGKEPGGHRVDQDETNALLIRLAREGKRVVRLKGGDPFVF
                     GRGAEEADALRAAGVPYEVVSAPTSAIAALAAAGIPVTDRRAASSVAFVTGHCTSGTV
                     DWPALARSVDTLVILMGLGHLGEIVGQLIDAGRPAAMPAAAVANGTLPDQRIVVATLG
                     DLPRAVAESGIRPPAIIVVGEVVALRPQPV"
BASE COUNT          687 a         1720 c         1739 g          659 t
ORIGIN      
        1 gcggggcgat ggccaccgcg aagacctgcc cgcacggccc gggcgaccgg gtggtcctgt
       61 ccggagccga ggtccggcgc cggctgagct ccggcgagcc gctcccgccc gagttctccc
      121 gtcccgaggt ggccgaggtc ctacgcgcgg cgttcgcgga cgccgggacg tccggctagg
      181 cgcggacgcc accgacgacc agaccgacga aaggaagtgt gatgccccga tttggcgaag
      241 gacaatgggc gctgggctac cacgagccgc tgaacaagaa cgagcgcgcc aagcgtgatg
      301 acgacggtct gaatgtccgc gcccgcatcg agacggtcta ctccaagcag ggcttccgtt
      361 cgatctggcc cgacgacctg cgcggccgga tgcggtggtg gggcctgtac acccagcggc
      421 gccagggcgt tcccgccggg tcgaccgcca ccgccgagcc gcaggaactc gaggacgagt
      481 tcttcatgct gcggatccgc aatgccggcg ggcggatgac ctccgagcag ctgcgggcga
      541 tcgcctgggt gtcggagcgg ttcgggcggg acgtcgccga cgtcaccgac cgccagaaca
      601 tccagttgca ctggatccgc atcgaggacg tgccccggat ctgggagaag atcgagtcgg
      661 tcgggctgac ctcgtgcgag gcctgcggcg acaccccccg ggcgttcctc ggctgcccgg
      721 tggccggtgt cggccgcgag gagatcttcg acgccacgcc cgacctgatg gcgacccacc
      781 agcggttcgt cggcgacccg tcgttctcca acctgccccg caagttcaag acctcgatct
      841 ccggctgcgc ccagcagtgc gcggcgcacg agatcaacga cgtgtccttc gtcggggtgc
      901 tccgggacgg gtgggggtca acgggcggca gcgaggcggg gtacgacctg tgggtcggcg
      961 gcggcctggg ctcgaacccg aagttcggca agcggctggg cgtcttcgtc gagccgtacc
     1021 aggtccccga ggtgtgggcc ggggtcgccg gagtgttccg cgactatggc taccggcgcg
     1081 cccgcaacca cgcccggctc aagttcctga tggccgactg ggggccggag aagtaccggg
     1141 agatcctcga gaagcagtac ctcggctacg ccctgcccga cggcgagccc gctccggcaa
     1201 cgaccacggc gcagcgggac cacgtcggcg tcttcgagca gaaggacggc aactgctacg
     1261 tgggcttcgc cccccgtgcc gggcggatct acggccacca gctgcggttg gtcgccgacc
     1321 tggccgaccg cttcggcggc ggcatggtga tggcgaccac ccagcagaag cttgtgatca
     1381 ccggcgtcgg ccccacctcg gtcgacgagc tggtggccag cctcaacgac ctcgacctgt
     1441 tggtcaaccc gagccccttc cgtaccggca cgatgtcgtg caccggcatc gagttctgca
     1501 agctggccct ggtcgagacc aagcaccgtg ccgactggct gtaccgggag ctcgaggagc
     1561 gccttcccga gttcaccgac ccgatccgca tcaacatcaa cggctgcccc aacgcctgcg
     1621 cccggttcca actcgccgat atcggcttca tgggatcggt gggccacgcc accgacggca
     1681 ccaaagtcga cgtgttccag gtgcacgtcg gcggccacct tggtcaggac cacgccttcg
     1741 gccggaaggt caagcgcctg aaggtgcccg gctccgagct ggcgaactac tgcgaacgac
     1801 tcttgcgccg cttccaggcc acccggcggc ccgacgagcc attccaccgg tgggcggccc
     1861 gcgcaccgga ggactggctg ctatgagcga tctggtcgaa gaggcggtgg tcccgagccg
     1921 cgcccgcgcc gaccggggcg tcgtgatctg gctgaccggc ctgccgtcgt cgggcaagag
     1981 cacgatcgcg gcggcgctgc tgccggcact gcgtgcccgc ggcgagcggg tcgaggtcct
     2041 cgacggcgac gtcgttcggg agaacctgtc ccggggcctc ggcttctcga aggaggaccg
     2101 ggacatcaac atccggagga tcgggttcgt cgccgagctg ctggcccgga acggggtcaa
     2161 ggtgatcacg gcggcgatct cgccgtaccg ggccatccgt gacgaggtcc gggcgctggc
     2221 cggcgagcgc ttcctcgagg tctacgtcgc caccccgctg gaggtgtgcg agtcgaggga
     2281 cgtcaagggg ctgtacgcca aggcgcgaag cggccagctg aagggcttca ccggcatcga
     2341 tgatccgtac gagccgccgc tggcgccgga ggtcgagatc gctgcccata ctgagacggt
     2401 ggaggagtcc gccgcccgca tcatcgacgc gctccaggcg cggggctatc tcgatgccga
     2461 ctgacctggc cgccacatcc ccggcgaccc cggccccaga gctgccggac ctcgacgacg
     2521 cctcggccga gtacgtcatg acctgggcga tcgagcgcta tttcccggag atcgcggtcg
     2581 cctgctcgat gcaggatgcc gtcgtcgtcg atctggcctg gcggatcgag ccgcggatcg
     2641 aggtcttctt cctggagacc gggttccact tccccgagac cctccacacc gccgagcgga
     2701 tgcggagccg ctaccagctg aacctggtcg ccatcccgcc ggtcgagaac ccggcggtct
     2761 actcgaagga cggctacgag gcctgctgcg ccgcccgcaa ggtcaagccg atggaccgct
     2821 acctcaccgg caagcgggcc tgggtgaccg ggctgcgccg gaccgaggcg accacccggg
     2881 ccggggcgcg cgcggtcgag tgggatggca agcggagcct ggtcaaggtc aacccgattg
     2941 tggcctggag cgacgagcag gtcgaccgct acatcgccga gcacgatctg atcgtgaatc
     3001 cactgcggct ggagggctac gactcgatcg gctgctggcc gtgcaccaag gccgggaagg
     3061 gccgcgaggg ccgctgggcc gggctggaga agaccgagtg cgggctgcac gtggctgcgg
     3121 cccacacccc ggggcacccc gaagccgctc cgacggcgta gcggtgagcg agctcgactc
     3181 gccccgggtc cagcccttct actgccccta ctgcgccgag gaggacattg tcccctgcgg
     3241 cgcgctggac gacccgcccg ggggatacca ctgccggtcg tgcgaccgca ggtaccacct
     3301 gcggtacctt gggtcgggcc cgggcgcgcc gagtgcgcac ccggcttcga aggaggcggc
     3361 cacctcgtga gtttccggta cccggtcacc ctcgacctgg acgggcggcg ctgcgtcgtg
     3421 atcggcggcg ggcccggcgc cgaggggaag atcgacggcc tgctcgagtc cggggcagag
     3481 gtcaccgtgg tcggggtcac cgtgaccgac ggtatcgccg cgctggctgc ggccggcagg
     3541 atcagctggc tgcgccggcc gtacgccgcc ggcgacctgg acggggccat gctggcaatc
     3601 gccgccaccg gggctcccga gatcaacgcc cgcatccacg ccgacgcccg ccgcgcccgg
     3661 gtgctgctca acgccctgga cgacgttgcc cactgcgact ttgccgcgcc ggcgaccgtc
     3721 cgccgaggcg acctcaccat cgccgtgtcg accgccggga aggcccctgc cctggcccgg
     3781 cggctccggg aacggctgtc gcaggagttc gggccggagt ggggtcggct cgtcgaggtc
     3841 ctcggcgatg cgcgggcggc cgtggggaaa cggacgaccg acttcccgac ctgggcggag
     3901 cgctggagcc gggcgctcga tcaggatctg atcggcctga tccgctccgg cgacgaggcg
     3961 gcggtcgttg acgcgctgcg gcgggcgctg gcgggggagc ccgccgccgg ctcctcagcc
     4021 gaatccaccg ccggcccccc cgccgagccc accgccggcc cccccgccga gcccaccgcc
     4081 gagcccaccg ccggatcctc ccgcgggtcc gtggccatcg tcggtgccgg ccccggtgac
     4141 ccggacctga tcacggtccg gggcaaggcg ctcgtcgagg ccgccgacgt cgtcgtctac
     4201 gaccgcctgg tgcacccctc gttgtgggcc ggcaggacgg ccatcgacgc cggcaaggag
     4261 cctggcggcc accgggtcga ccaggacgag acgaacgcgc tgctgatccg gctcgcccgg
     4321 gaaggcaagc gggtggtccg gctgaagggc ggcgacccgt tcgtgttcgg ccggggggcc
     4381 gaggaggccg acgcgctgcg agcggccggg gttccctacg aggtcgtctc cgccccaacc
     4441 tcggcgatcg ccgcgctggc ggcggcaggg atcccggtga ccgaccgccg ggcggcgtca
     4501 tcggtcgcct tcgtcaccgg gcactgcacg tccgggaccg tcgattggcc tgccctggcc
     4561 aggtcggtcg acaccctggt gatcctgatg ggcctggggc acctcggcga gatcgtcggg
     4621 cagctgatcg acgccggccg gccggccgcc atgccggccg ccgcagtggc caacggcacg
     4681 ctgccggacc agcggatcgt cgtcgccaca ctcggggacc tgcctcgggc ggtggcggag
     4741 tcgggcatcc ggccccccgc catcatcgtc gtcggcgagg tggtcgcgct gcgcccgcag
     4801 ccggt
//
LOCUS       DATGJT010000285         2180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_37715, whole genome shotgun sequence.
ACCESSION   DATGJT010000285 DATGJT010000000
VERSION     DATGJT010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37715"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..698)
                     /locus_tag="VKX24_04890"
     CDS             complement(<1..698)
                     /locus_tag="VKX24_04890"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07850.1"
                     /translation="MRAVLDSALHPGAHAGIDPDRPAVVMAATGDAVTYAELAAQSAR
                     LARAWRAAGLRPGDGVALLVENHPRFLVAAWAAQRSGLYFTPISTQLGAAEVGYILAD
                     SGASVLVASARTASVAADAAAGLDAPLRLRLLVDGTGEGPSGGFAGWDDVVAGHPADP
                     LPDETEGADMVYSSGTTGRPKGIRRPLTGEPFGTPPRRLAAMVDLYGFGADTVYLSSA
                     PLYHAGPLRFAMTA"
     gene            complement(701..>2180)
                     /locus_tag="VKX24_04895"
     CDS             complement(701..>2180)
                     /locus_tag="VKX24_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018333053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HLJ07851.1"
                     /translation="VGVRVPGFSPEAVDLQYFGDMPGIPSYESERRDFDESPEWSERA
                     GAWLLSDVFGATGLDELDAHRSEVQAIIAARPDLAGLSDPALAERITTWAPLFRKLFR
                     MHIIVSLKAGIGLGALAQVCQAIGRPELSLTLARGIGDVDSAGPSLAMWDLGRQVAES
                     AELTRLFDAGVDGLPERLQGSSDPAVAAFVARFEEFLMTWGFRGPNEWELRSPTWGTQ
                     PALALALIDRVRGASSSASPPAALERGGAEREAAAADVRALLAGNDEALPQFEAALHA
                     ATLWCRARERQRTTTAMLVHEQRLAALELGRRAVAAGRLDRPEQLFMLTADELGSFVA
                     GEDVAAMVAGREAAYLELFDLEPPFVVDGTPPPLCEWKRRSAAAAGPKLTAGQSISGV
                     PGCPGIARGVARVVLDPSDPSQLEAGEVLVAPITDPSWTPLFVAASAVVVQVGSPFSH
                     AAIVSRELGIPCVVSAGDCTALIPDGALVEVDGTAGTVTVVG"
BASE COUNT          292 a          787 c          865 g          236 t
ORIGIN      
        1 tgggcggtca tggcgaagcg cagcggaccg gcgtggtaca gcggcgccga cgacaggtag
       61 acggtgtcgg ccccgaagcc gtagaggtcg accatggccg ccagccgccg gggcggcgtc
      121 ccgaacggct cgccggtcag cggccgtcgg atgcccttgg gccggccggt ggtgcccgac
      181 gagtagacca tgtcggcgcc ctcggtctcg tcggggagcg ggtcggccgg atggccggcc
      241 acgacgtcgt cccagccggc gaacccgccg gacgggcctt cgccggtgcc gtcgacgagg
      301 agccgcagcc gcagcggcgc gtcgagcccg gcggcggcgt cggcggcgac ggaggcggtg
      361 cgggccgagg cgacgagcac cgaagcgccg gagtcggcca ggatgtagcc cacctcggcc
      421 gcgccgagct gggtgctgat cggcgtgaag tacagcccgg agcgctgcgc cgcccacgcc
      481 gccaccagga accggggatg gttctcgacc agcagggcca cgccgtcgcc cggccggagg
      541 cccgccgccc gccacgcccg ggccagccgg gccgactgcg ccgcgagttc ggcgtaggtg
      601 acggcgtcgc cggtggcggc catgacgacc gccggccggt cggggtcgat cccggcgtgg
      661 gcaccggggt ggagggcgga gtccagcacg gcgcgcatcg tcaccccacg accgtgacgg
      721 tcccggccgt cccgtcgacc tcgaccaggg cgccgtcggg gatcagcgcg gtgcagtcgc
      781 cggccgagac gacgcagggg atgccgagct cgcggctcac gatggcggcg tgggagaacg
      841 gggagccgac ctggacgacg acggccgagg cggccacgaa cagcggcgtc cacgacgggt
      901 cggtgatcgg cgccaccagc acctcgcccg cctcgagctg cgaggggtcg gacgggtcga
      961 gcaccacccg ggcgacaccc cgggcgatgc cggggcagcc ggggacgccg gagatcgact
     1021 gcccggccgt gagcttgggg ccggccgcgg cggcggagcg gcgcttccat tcgcacagcg
     1081 gcggcggcgt gccgtcgacg acgaacggcg gctcgaggtc gaacagctcc aggtacgccg
     1141 cctcgcgccc ggcgaccatg gcggcgacgt cctccccggc cacaaaggag cccagctcgt
     1201 cggcggtcag catgaacagc tgctcgggcc ggtcgaggcg cccggcggcg acggcccgcc
     1261 ggccgagctc gagggcggcc aggcgctgct cgtggaccag catggccgtg gtcgtccgct
     1321 gccgttcccg ggcccggcac cacagcgtgg cggcgtgcag cgccgcttcg aactggggca
     1381 gcgcttcgtc gttcccggcc agcagggccc ggacgtcggc ggcggccgct tcccgttcgg
     1441 cgccgccccg ttccagggcc gccggcggcg acgccgagga ggaggcgccg cggacccggt
     1501 cgatgagggc cagggccagc gcgggctggg ttccccaggt gggcgagcgc agctcccact
     1561 cgttggggcc ccggaacccc cacgtcatca ggaattcctc gaaccgggcg acaaaggccg
     1621 ccacggcggg gtcggagctt ccctgcaggc gttcggggag gccgtccacg ccggcgtcga
     1681 agagtctcgt gagctcggcc gattcggcca cctgccggcc gaggtcccac atggccagcg
     1741 acgggccggc cgagtcgacg tcgccgatgc cccgggcgag ggtgagcgac agctccggcc
     1801 ggccgatcgc ctggcacacc tgggccaggg ccccgaggcc gatgccggcc ttgaggctga
     1861 cgatgatgtg catgcggaac agcttccgga acaacggcgc ccaggtcgtg atccgctcgg
     1921 cgagagcggg gtcgctcagc ccggcgaggt cggggcgggc ggcgatgatc gcctggacct
     1981 cggaccggtg ggcgtcgagc tcgtcgaggc cggtggcccc gaacacgtcc gagagcagcc
     2041 aggcgccggc ccgctcgctc cactccgggc tctcgtcgaa gtcgcggcgc tcgctctcgt
     2101 aggacgggat gccgggcatg tcgccgaagt actgcaggtc gaccgcttcg ggcgagaacc
     2161 cggggacgcg tacgccgacc
//
LOCUS       DATGJT010000286         2173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1386592, whole genome shotgun sequence.
ACCESSION   DATGJT010000286 DATGJT010000000
VERSION     DATGJT010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386592"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /locus_tag="VKX24_04900"
     CDS             complement(<1..527)
                     /locus_tag="VKX24_04900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015793178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 family protein"
                     /protein_id="HLJ07852.1"
                     /translation="MKFRPPPFPRLPEWRREALRTTLWFVPTLQVAAATAVFAVTYAV
                     DRAAYDGGLALPAWVNNGSADAARQVLVGIAAAVITVIGLVFSITIVALTLASTQFGP
                     RMLRKFVRDRGTQVTLGTFVATSVYAMLGLGSISHGSRGDFVPHLTITVSFLLVLADL
                     GLLIYFVHHVAASIQL"
     gene            775..951
                     /locus_tag="VKX24_04905"
     CDS             775..951
                     /locus_tag="VKX24_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07853.1"
                     /translation="MQDLVFIAVIVGFFGVLWLLIGAFDRIIGSDEEALGHPAGEPGP
                     AEPTGPTEPEEQAA"
     gene            948..1037
                     /gene="kdpF"
                     /locus_tag="VKX24_04910"
     CDS             948..1037
                     /gene="kdpF"
                     /locus_tag="VKX24_04910"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF021144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HLJ07854.1"
                     /translation="MSGDDVIGIVVAVFLLAYLVIALVAPEKF"
     gene            1037..>2173
                     /gene="kdpA"
                     /locus_tag="VKX24_04915"
     CDS             1037..>2173
                     /gene="kdpA"
                     /locus_tag="VKX24_04915"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HLJ07855.1"
                     /translation="MTAAGWLELAALIGSILVTVPLLGAYMAKVYDPSLGKPRGDRFF
                     SAIERPIFKVCGIDPESEQRWSTYALSLAAFSLVSVLILYLQLRLQGHLFLNPDHFKD
                     LDPKLSFNTAVSFLTNTNWQAYGDGVMSQATQMLGLAFHNFVSAAAGAAVAVALIRGL
                     ARRRSRTLGNFWVDMIRTCTRILLPITFVAAVLFLSQGVIMNFSADKPVTTVAGQTQT
                     IPGGPLASQEAVKEGGQNGGGYFGTNSMHPFENPTPFADLLQLWLMLAIPFAFTYAFG
                     KMVRDQKQGWVVFATMFVMWLGMLLIVTPLETRGNPKLTALGANQQTTALQSGGNMEG
                     KDTRFGPISCGYYAASTTSTSDGSVNCAHDSLTPLAGGVTLVNMM"
BASE COUNT          350 a          773 c          727 g          323 t
ORIGIN      
        1 agctggatcg aggcggcgac gtggtggacg aagtagatga gcagcccgag gtcggccagc
       61 acgagcagga aggacaccgt gatcgtgagg tgggggacga agtcgccccg ggaaccgtgc
      121 gagatcgacc cgaggccgag catggcgtag accgaggtgg ccacgaacgt cccgagcgtg
      181 acctgggtgc cccggtcccg cacgaacttg cgcagcatgc gggggccgaa ctgcgtcgac
      241 gccagggtca gggcgacgat ggtgatcgag aagacgagcc cgatgacggt gatgacggcg
      301 gcggcgatcc cgacgagcac ctggcgggcg gcgtcggcgc tgccgttgtt gacccaggcc
      361 ggcagggcga ggccgccgtc gtaggcggcc cggtcgacgg cgtaggtgac ggcgaagacc
      421 gccgtggccg ccgcgacctg cagcgtgggg acgaaccaca acgtggtccg cagcgcctcg
      481 cgcctccact cggggaggcg ggggaatggc ggtgggcgga acttcaccgg cggacctcga
      541 gagcgcggga cgggaagcgc cgaccagtct tcccggctca ccccggacgc aatgttaggc
      601 agtctcgttg cggcccggtg acccgtgacc gggacggctt cgccgctacc ggcccgctaa
      661 aagccgggtc agggcgctaa gacagcgcca agtccgttcc ctccgcccga cggcgcgccg
      721 tatctcaatg acgtagggct catcgggagc cgtccggacg agagagaggg accaatgcag
      781 gacctcgtct tcatcgctgt gatcgtgggc ttcttcggcg tcctgtggct cctcatcggg
      841 gccttcgacc gcatcatcgg ctccgacgag gaagccctcg gccaccccgc aggcgagccc
      901 ggcccggcgg agccgaccgg gccgaccgag cccgaggagc aggcggcatg agcggcgacg
      961 acgtcatcgg gatcgtggtc gccgtcttcc tgctggccta cctcgtgatc gccctcgtcg
     1021 ccccggagaa gttctgatga ccgccgccgg ctggctcgag ctcgccgccc tcatcggctc
     1081 gatcctcgtc acggtgcccc tgctcggcgc ctacatggcc aaggtctacg acccgtcgct
     1141 cgggaagccg cggggcgacc gcttcttctc cgccatcgag cggcccatct tcaaggtgtg
     1201 cgggatcgac cccgagagcg agcagcgctg gagcacctac gccctctcgc tggccgcctt
     1261 ctcgctggtg tcggtcctga tcctctacct gcagctgcgc ctccagggcc acctgtttct
     1321 caatccggac cacttcaagg acctcgaccc caagctgtcg ttcaacaccg cggtcagctt
     1381 cctgaccaac accaactggc aggcctacgg cgacggcgtc atgagccagg ccacgcagat
     1441 gctcgggctg gccttccaca acttcgtctc ggccgccgcc ggggcggcgg tggcggtggc
     1501 cctcatccgg ggcctggccc ggcgccggtc ccgcacgctc ggcaacttct gggtcgacat
     1561 gatccggacc tgcacccgga tcctgctccc catcacgttc gtggccgccg tgctgttcct
     1621 gagccagggc gtgatcatga acttcagcgc cgacaagccg gtcaccaccg tcgccggtca
     1681 gacccagacg atccccggcg ggccgctggc cagccaggag gccgtcaagg aaggcggcca
     1741 gaacggcggc gggtacttcg ggaccaactc gatgcacccc ttcgagaacc ccaccccgtt
     1801 cgccgacctg ctgcagctct ggctcatgct ggccatcccg ttcgccttca cctacgcctt
     1861 cgggaagatg gtccgggacc agaaacaggg ctgggtcgtc ttcgccacca tgttcgtgat
     1921 gtggctcggc atgctgctga tcgtcacgcc gctcgagacc cggggcaacc ccaagctcac
     1981 cgccctcggc gccaaccagc agacgacggc gctgcagtcc ggcggcaaca tggagggcaa
     2041 ggacacgcgc ttcgggccga tcagctgcgg ttactacgcc gcctccacca ccagcacctc
     2101 cgacgggtcg gtcaactgcg cccacgacag cctcacccct ctggccggcg gcgtgacgct
     2161 ggtcaacatg atg
//
LOCUS       DATGJT010000287         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_971413, whole genome shotgun sequence.
ACCESSION   DATGJT010000287 DATGJT010000000
VERSION     DATGJT010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971413"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..558
                     /locus_tag="VKX24_04920"
     CDS             100..558
                     /locus_tag="VKX24_04920"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011753911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H"
                     /protein_id="HLJ07856.1"
                     /translation="MPDPAGPVVVYTDGSCLGNPGPGGWAWAVPGGRSESGGEARTTN
                     QRMEITAVLRALEALGGDGSPVRVVSDSTYVVRCFKDRWWEGWLRRNWRNSAGKPVAN
                     RDLWEPLLQLVLHSGRDVTFSWVKGHSGDRWNDFVDQLAVAAAMDARSST"
     gene            601..1362
                     /locus_tag="VKX24_04925"
     CDS             601..1362
                     /locus_tag="VKX24_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ07857.1"
                     /translation="MELTNSSAVVTGGASGLGAAAARALSQRGARVVVFDRNEAGAKQ
                     VADEVGGDYVAGDVTDGDDCQKAVDRAAESGTLRVAVNCAGTGFAGRTINRDGTPHDP
                     RAFEFILRLNVIGTFNVMIRAASAMASTEPLEDGERGVIVNTASVAAFDGQIGQLAYS
                     ASKGAVVSMTLPAARDLSVVGIRVVTIAPGLFDTPLLAMLPDEQRRALGESVLFPKRL
                     GAPEQFGDLVAAIVGNPYLNGEVIRLDGGIRMPPR"
     gene            1373..>2110
                     /locus_tag="VKX24_04930"
     CDS             1373..>2110
                     /locus_tag="VKX24_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006539298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLJ07858.1"
                     /translation="MRYREVGGTRVSVVGLGAWQFGSREWGYGEAYAKEAAPAIVRRC
                     LDLGITLFDTAEIYGFGRSERILGAALGDRRVEAFVATKLFPVLPVDPVVGRRARQSA
                     ARLGVQTIDLYQVHWPNPVVPLSATMRALAALQRDGLVRHVGVSNFSLDQWKRAEDLL
                     GAPVLSNQVRYNLVDRRIERDLLGWAKEHDRLVIAYSPLQQGLLSARYGPDHQPKGMR
                     ANTPDFLPENLRRIAPLLDVLRRVAEAH"
BASE COUNT          287 a          772 c          765 g          286 t
ORIGIN      
        1 cgaagagcac gtccccatgt tcgcagctgg gcccggacac ccatgacgcg gcgccgggga
       61 gccgcgtcat gggcccgacg gggtagtaca catggcccga tgcccgaccc cgccggcccg
      121 gtcgtcgtct acaccgacgg ctcgtgcctc gggaacccgg ggcccggcgg ctgggcctgg
      181 gccgtccccg gtggccgcag cgagagcggc ggcgaggccc ggaccaccaa ccagcggatg
      241 gagatcacgg ccgtcctccg ggcgctcgag gccctcgggg gcgacgggtc cccggtcagg
      301 gtggtgagcg actcgaccta cgtcgtccgc tgcttcaagg accgttggtg ggaggggtgg
      361 ctgcgccgga attggcgcaa ctcggcgggc aagccggtcg ccaaccgcga cctgtgggag
      421 ccgctcctcc aactcgtgct ccactcgggc cgcgacgtca ccttctcctg ggtgaagggc
      481 cacagcgggg accggtggaa cgacttcgtc gaccagctgg ccgtggcggc ggcgatggac
      541 gcacgctcgt cgacctgacg gaagtgcgcc accggtaggc cgagccgtag attcgcccgc
      601 atggaactga ccaacagctc ggccgtcgtc accgggggag cgtcggggct cggcgccgct
      661 gccgcccggg cgttgtcgca gcggggggcg cgggtcgtcg tcttcgaccg caacgaggcc
      721 ggcgccaagc aggtggccga cgaggtcggc ggcgactacg tggccggcga cgtcaccgac
      781 ggagacgact gccagaaggc cgtcgaccgg gccgccgaga gcggcacgtt gcgggtcgcg
      841 gtcaactgcg ccgggaccgg cttcgccggg cggacgatca accgcgacgg gaccccccac
      901 gacccgcggg ccttcgagtt catcctccgg ctgaacgtga tcgggacctt caacgtcatg
      961 atccgggccg cctcggccat ggcgagcacc gagccgctcg aggacggcga gcgcggggtg
     1021 atcgtgaaca cggcgtcggt cgcggccttc gacgggcaga tcggccagct cgcctactcg
     1081 gcctccaagg gcgcggtcgt gtcgatgacg ctgcctgccg cccgcgacct ctcggtcgtg
     1141 ggcatccggg tggtcacgat cgcccccggg ctcttcgaca ccccactcct ggccatgctc
     1201 cccgacgagc agcgccgggc gctcggcgag tcggtgctgt tcccgaagcg cctcggcgcc
     1261 cccgagcagt tcggcgacct ggtggccgcg atcgtgggca acccgtacct gaacggcgag
     1321 gtgatccggc tggacggcgg catccggatg ccgccgcgct gaggcccggc gcgtgaggta
     1381 ccgcgaggtc gggggcaccc gggtctcggt cgtcggcctc ggggcctggc agttcgggtc
     1441 gcgcgagtgg ggatacggcg aggcctacgc caaggaggcc gcaccggcga tcgtccgccg
     1501 ttgcctcgac ctcgggatca ccctcttcga cacggccgag atctacgggt tcggccggtc
     1561 cgagcgcatc ctcggggcgg ccctcggtga ccgacgggtc gaggcgttcg tcgccaccaa
     1621 gctcttcccg gtcctgccgg tcgacccggt cgtcggccgc cgggcgaggc agagcgcggc
     1681 ccggctcggc gtccagacca tcgacctgta ccaggtgcac tggccgaacc cggtggtgcc
     1741 gctgtcggcg acgatgcggg ccctcgccgc gctccagcgc gacgggctcg tccgccacgt
     1801 cggggtgtcc aacttctcgc tcgaccagtg gaagcgtgcc gaggacctcc tcggcgcccc
     1861 cgtcctctcc aaccaggtcc gctacaacct ggtcgaccgc aggatcgagc gcgacctgct
     1921 cggctgggcg aaggagcacg accggctggt catcgcgtac agcccgctcc agcagggtct
     1981 gctgtccgcc cgctacgggc ccgaccacca gccgaagggc atgcgagcca acaccccgga
     2041 cttccttccc gagaacctcc gccggatcgc gccgctcctg gacgtgctcc gccgagtggc
     2101 cgaggcccac
//
LOCUS       DATGJT010000288         3294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_142484, whole genome shotgun sequence.
ACCESSION   DATGJT010000288 DATGJT010000000
VERSION     DATGJT010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142484"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VKX24_04935"
     CDS             <1..449
                     /locus_tag="VKX24_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018193356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07859.1"
                     /translation="PTDYAPAGSRLIVPHLIANRLDGLEPGAYVYDQAFALLGSGDFS
                     AEAGYLCLEQVLGRDAAATHFLMADLPAVLATLGERGYRAAQLEAGVTGGRIYLAAEA
                     HRIGATGLTFYDDEVTAFFAPPGVPPRSCMLVTAAGPATRRLLPRA"
     gene            595..1662
                     /locus_tag="VKX24_04940"
     CDS             595..1662
                     /locus_tag="VKX24_04940"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLJ07860.1"
                     /translation="MASDPRFPVQDRYAYLNAGAVGPLSETTVEAMAAADRLGMEEGR
                     AVHGGFMERMAMRDQVREKVGALLGGVPSSTIAVTVSTTQGIETVVGGLELRPEDEII
                     TTDAEHPGLEGCIAGSPATIKVAAVLGKTASEVVENIGALATDRTRLVALSHVLWLNG
                     QVLPLAAIKARCGVPLLVDGAQSVGAIDVEATVADYYTVSGQKWLCGPELTGALYVAD
                     PTSLKPRRVYPPSPWHPPATEAGHLELQFHPRSLLAGFLAALDERPADAVTRGAQVTE
                     ACLEALVGAGVEVLTEPGQSRLVSFRLPGDAEAAVNHCQAQGVVLRSLPNGWLRASCG
                     WWNSTTDIERLVAAVTSVPEA"
     gene            1828..3204
                     /locus_tag="VKX24_04945"
     CDS             1828..3204
                     /locus_tag="VKX24_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011720791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004030 - aldehyde dehydrogenase [NAD(P)+]
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinic semialdehyde
                     dehydrogenase"
                     /protein_id="HLJ07861.1"
                     /translation="MTIATINPATGHTVKTFDAATPEEVDRQLERAIQAFGEWRSSSF
                     ATRGAVCEAAAGILDAEADELGALMTLEMGKTLGEAKAEVAKCARAFRFYAAHAEEQL
                     AEQPADASAVGARRAAVRFQPLGPVLAVMPWNFPLWQVTRFAAPNLMAGNVGLLKHAS
                     NVPQTALAFEDVLRRAGAAEGVFQTLLIGSDMVAAVLTDPRVRAATVTGSNAAGQSVA
                     QIAGEETKKTVLELGGSDPFVVLPSADVQAAVKVGVKARCQNNGQSCIAAKRFIVHAG
                     VAEEFQKGFVDAMRALKVGDPTQPATAIGPLATKQSRATVAEQVGDAVAKGAKVLCGG
                     EVPEGDGWYYPPTVVTGITSEMRMHHEEVFGPVAQLYVVASLDEAIAVANDTPFGLGA
                     NVWTQDPAEQERSIAELEAGMVFVNGYTISFPELPFGGVKASGYGRELGTTYGIREFC
                     NTKTVWIG"
BASE COUNT          474 a         1184 c         1202 g          434 t
ORIGIN      
        1 tgcccaccga ctacgccccg gcgggctccc ggctgatcgt gccccacctg atcgccaacc
       61 ggctcgacgg gctggagccc ggagcctacg tctacgatca ggccttcgcc ctgctgggct
      121 ccggcgactt cagcgcggag gccggctacc tgtgcctgga gcaggtcctg ggccgggatg
      181 cggcggcgac gcacttcctg atggccgacc tgccggccgt cctggcgacg ctcggggaac
      241 ggggctaccg ggccgcccaa ctcgaggccg gcgtcaccgg cggccggatc tacctggcgg
      301 ccgaggccca ccgcatcggc gccaccggcc tgaccttcta cgacgacgag gtcaccgcct
      361 tcttcgcccc gcccggcgtg ccgccccgca gctgcatgct ggtcaccgcc gccggcccgg
      421 cgacccggag gctgctcccc cgggcatagg ctgcccccgg cggcccggcg acccggaggc
      481 tgctcccccg ggcataggct gccaactcga cccagaggcc gcccggcgta gggatggttg
      541 ccgcggccgg acccggggag catcgccgtg gcccggtcgt cctaaactgc cggcgtggct
      601 tccgaccccc ggttccccgt gcaggaccgc tacgcctacc tgaacgccgg cgccgtcggc
      661 ccgctctcgg agacgacggt cgaggcgatg gccgccgccg accggctcgg gatggaggag
      721 ggccgggcgg tccacggcgg cttcatggag cgcatggcga tgcgcgacca ggtccgggaa
      781 aaggtcgggg cgctgctcgg cggggtcccc tcctcgacga tcgcggtgac ggtctcgacc
      841 acccagggca tcgagaccgt cgtcgggggc ctggagctcc ggcccgaaga cgagatcatc
      901 acgaccgacg ccgagcaccc cggccttgag gggtgcatcg ctggttcgcc ggcaacgatc
      961 aaggtggcgg cggtgctggg caagaccgcg tcggaggtcg tcgagaacat cggggccctc
     1021 gcgaccgacc gtacccgcct ggtcgccctc tcgcacgtgc tgtggctgaa cggccaggtg
     1081 ctgccgctcg ccgcgatcaa ggcccgctgc ggggtgccgc tgctggtcga cggcgcccag
     1141 tcggtcgggg cgatcgacgt cgaggcgacg gtggccgact actacaccgt gtccgggcag
     1201 aagtggctgt gcggcccgga gctgaccgga gcgctctacg tggccgaccc gacatcgctg
     1261 aagccacgcc gggtgtaccc gcccagcccg tggcacccgc cggcgaccga ggcggggcac
     1321 ctggaactgc agttccaccc gaggtcactg ctcgccggct tcctggccgc cctcgacgag
     1381 cgcccggcgg atgcggtcac ccgcggcgcc caggtgaccg aggcctgcct ggaggcgctg
     1441 gtcggcgccg gggtcgaggt gctgaccgag ccgggccagt cccggctggt gtcgttccgc
     1501 ctgcccgggg acgccgaggc ggcggtgaac cactgccagg cgcagggagt ggtcctgcgc
     1561 agcctgccga acgggtggtt gcgggcctcc tgcggctggt ggaactcgac gacggacatc
     1621 gagcggctgg tggccgccgt gacgtcggtg cctgaggcct gacccgcccg gcctcgcggt
     1681 aacacccatc caccgtcggc cgggtggccg gagcgtccgg atcgggtaca cagtagggtg
     1741 ggcactgcga gccggtgccc ggtggccccc tgccgcaggc cggaaggcca gccggaacac
     1801 cagccggaac atgactgcga ggaaccgatg accatcgcaa ccatcaaccc cgccaccggg
     1861 cacacggtca agaccttcga cgcggcgacg cccgaggagg tcgaccgcca gctcgaacgg
     1921 gcgatccagg ctttcggcga gtggcgttca tccagcttcg ccacccgcgg ggcggtgtgc
     1981 gaggccgccg ccggcatcct cgacgccgaa gccgacgagc tcggcgccct gatgaccctg
     2041 gagatgggca agacactggg cgaggccaag gcggaggtcg ccaaatgcgc ccgggccttc
     2101 cggttctacg ccgcccacgc cgaggaacag ctcgccgagc agccggccga cgcctccgcg
     2161 gtcggcgcca ggcgcgccgc agttcgcttc cagccgctcg ggccggtgct ggccgtgatg
     2221 ccctggaact tcccgctgtg gcaggtgacc cgcttcgccg ccccaaacct gatggcgggc
     2281 aacgtcggcc tcctcaagca cgcctccaac gtgccgcaga ccgccctcgc cttcgaggac
     2341 gtgctccggc gagccggggc ggcggagggg gtcttccaga cgctgctgat cgggtcggac
     2401 atggtcgccg ccgtgctcac cgacccccgg gtgcgggcgg cgacggtcac cggctccaac
     2461 gccgcgggcc agtcggtcgc ccagatcgcc ggggaggaga cgaagaagac tgtcctcgag
     2521 ctggggggca gcgacccgtt cgtcgtcctt ccgtcggccg acgtccaggc cgccgtgaag
     2581 gtcggggtca aggcccgctg ccagaacaac ggccagagct gcatcgccgc caagcggttc
     2641 atcgtgcacg ccggcgtcgc cgaggagttc cagaagggct ttgtcgacgc catgcgcgcc
     2701 ctgaaggtgg gcgaccccac ccagccggcg accgccatcg gaccgctcgc cacgaagcag
     2761 agccgggcga cggtggccga gcaggtcggc gacgccgtcg ccaagggggc caaggtgctg
     2821 tgcgggggcg aggtgccgga gggagatggc tggtactacc caccgacggt cgtcaccggc
     2881 atcacctccg agatgcggat gcaccacgag gaggtgttcg gcccggtcgc ccagctctac
     2941 gtggtggcga gcctcgacga ggcgatcgcg gtcgccaacg acacgccgtt cgggctgggc
     3001 gccaacgtct ggacccagga cccggccgag caggagcgca gcattgccga gttggaggcc
     3061 gggatggtgt tcgtcaacgg ctacaccatc tcgttccccg agctgccctt cgggggcgtg
     3121 aaggcctccg gctacggccg ggagctgggt acgacctacg ggatccgtga gttctgcaac
     3181 acgaagacgg tctggatcgg ctaaccggct ccgggccgct caggcctcgt agttccagat
     3241 ctggcggggc agcgggatcg gctggtcgaa gtcgatgaac ggcgggaaga aggt
//
LOCUS       DATGJT010000289         2893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_38525, whole genome shotgun sequence.
ACCESSION   DATGJT010000289 DATGJT010000000
VERSION     DATGJT010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38525"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            320..880
                     /locus_tag="VKX24_04950"
     CDS             320..880
                     /locus_tag="VKX24_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07862.1"
                     /translation="MLKRVLASVALGSLVLLTASTPAMARGGGGHMGGGHMSSPVMMH
                     RGGGSMAHAGSGHFRSPMNRQFRDRDDFRFRDRDDFRRFRHFHRFVFFPYPYYPYYPS
                     YCPGSYGYPPFPGPYPYAAAYCPSYYPYGYGGDGTYGGYGYDDPSAPPMRDSRRAPNS
                     QPAANSQPMPNSQPMSGGMSGSSSGY"
     gene            complement(952..1926)
                     /locus_tag="VKX24_04955"
     CDS             complement(952..1926)
                     /locus_tag="VKX24_04955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07863.1"
                     /translation="MNHHPVTPHRRATLAALAAVLVLVPLGSGAAGAAGAAGAAGSGD
                     AAGSPPSIYEARAEAAAFANSFAVPAQIDTFTPYSLSETASGSSHGLQSVFYPGFLLS
                     AAAFQQGFPPPPGTTETLYPQGPTEKNASVFPLPGGPGSSGKSGPAASNGEAHYGSSG
                     SGDSGGAFGSSKTSVSALTATVRSTADVVLNQVRLGGGLVISSIVATAEATADGTTGG
                     AHNTGSVTLDGLTLSGVPLALTPSQLEAGGQKTDVPSPEGLNPALAAAGISIHRLPDS
                     RVTAPDGTESRLELGGYEIRIDQPSREFHARYVLGRVSVLARAVRSSG"
     gene            complement(1923..2627)
                     /locus_tag="VKX24_04960"
     CDS             complement(1923..2627)
                     /locus_tag="VKX24_04960"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ07864.1"
                     /translation="MTVLEGRELSVAYGGVQAVVDLSVRIEPGRITALLGPNGAGKTS
                     VLRAMSGLVPHGGTVSVDGLVVSDPAVLRSVGVIHVPQGRGLFRRLTVGQNLALGAYG
                     RPSAEVRTALADVETRFPQLARWKARPVGSLSGGEQVIVALGRLLVGRPRFALLDEIS
                     LGLAPVAVDRVYDEVLRLRDSGVGVLLVEQYAARALAVADEIVALQRGTVAWSGPPAE
                     LGGAEQFMKDYLGARR"
     gene            complement(2605..>2893)
                     /locus_tag="VKX24_04965"
     CDS             complement(2605..>2893)
                     /locus_tag="VKX24_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014445795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ07865.1"
                     /translation="DEPTAGMGAADADALCDLLDELRAELGLTVLLVEHDMAVVGRLA
                     ERVIVLDQGGVLAEGTPAEIAADPAVIAAYLGTSAHLLEETPIGGDRARRP"
BASE COUNT          390 a         1038 c         1078 g          387 t
ORIGIN      
        1 cgcccgttcc ggcgggcgcc ctcgctcgcg ccaccggaga cgaaggtccg ccgctgtggc
       61 tgctccagcc gtgagttatc cggctgacag agcacacgct gagtggcgcg tccggccgtt
      121 tcaggaaatc tcgggcgctg ggggagatcc ggatgcacct tttgtccgta tctggtgacg
      181 gagcgaaccg ggccgaatcg tctctatcgc ctacccgtcc ctgccgccta cccgtccctg
      241 ccgccgaggt gccgggctcg ctcggaccag gccgggcgcg cccggcctcc actcatcgat
      301 gggtgaaggg aggagaacca tgctcaaacg tgtcctggcg tcggtggcgc tgggcagtct
      361 cgtcctgttg acggcctcga ccccggccat ggcccgggga ggcggcggcc acatgggcgg
      421 cggccacatg agcagccccg tcatgatgca ccggggcggc ggctcgatgg cccacgccgg
      481 gagcggacac ttccgcagcc cgatgaaccg ccagttccgg gaccgggacg acttccggtt
      541 ccgggaccgg gacgacttcc gtcggttccg gcacttccac cggttcgtct tcttcccgta
      601 tccgtactac ccctactacc cgtcctactg cccgggctcc tacggctatc cgccgttccc
      661 cgggccctac ccctacgccg cggcctactg cccgtcgtac tacccgtacg gctacggcgg
      721 tgacgggacc tacggcggct acggctacga cgacccgtcg gcgccgccga tgcgagacag
      781 ccggcgggcg ccgaacagcc agccggcggc gaacagccag ccgatgccga acagccagcc
      841 gatgtcgggc ggcatgtccg gctcgtcctc cggctactga tcagaatcgg aaccttgacc
      901 ctcggccgcc gggccggggg tcaacggttc cgcgctcttg cgcttccccg ctcacccaga
      961 gctgcggacg gcccgggcga ggacggagac gcgtcccagg acgtagcggg cgtggaactc
     1021 gcgggacggc tggtcgatgc ggatctcgta gccgccgagc tcgaggcggc tctccgtgcc
     1081 gtcgggggcg gtgacccggg agtccggcag ccggtggatg ctgatgccgg ccgcggccag
     1141 ggcggggttc aggccttcag ggctcggcac gtcggtcttc tgtccgccgg cctcgagttg
     1201 gctgggcgtc agcgccaacg gcacgccgga gagcgtcagg ccgtcgagcg tgaccgatcc
     1261 ggtgttgtgg gcgccgccgg tcgtgccgtc ggcggtggcc tcggcggtgg ccacgatgct
     1321 ggagatcacg agcccgccgc ccagtcggac ctggttgagg accacgtcgg ccgtcgaccg
     1381 cacggtggcg gtgagggccg acaccgacgt cttcgaggat ccgaacgccc cgccggagtc
     1441 gccggacccg gacgatccgt agtgggcttc gccgttcgac gccgccggac cgctcttccc
     1501 cgacgacccg ggcccgccgg ggagcgggaa gacggaggcg ttcttctcgg tgggcccctg
     1561 cgggtagagc gtctcggtgg tgccgggcgg gggcgggaac ccctgctgga aggcggcggc
     1621 cgagagcagg aagccggggt agaacaccga ctgcagtccg tgggacgacc cgctggccgt
     1681 ctcgctcagg ctgtagggcg tgaacgtgtc gatctgggcg ggaacggcga agctgttggc
     1741 gaacgccgcc gcctcggccc gggcctcgta gatcgacggc ggcgaccccg ccgcgtcgcc
     1801 ggagcccgcg gcgccggccg cgccggccgc gccggccgcg ccggagccga gcgggacgag
     1861 gacgagcact gccgccagcg cggcaagggt cgcccggcgg tgcggggtga cgggatggtg
     1921 gttcatcggc gcgctcccag gtagtccttc atgaactgct ccgctccgcc gagttcggcg
     1981 ggcgggcccg accaggccac ggttccccgc tgcagggcga cgatctcgtc ggccacggcg
     2041 agggcgcggg cggcgtactg ctccacgagg aggacgccga cgccgctgtc acgcaggcgc
     2101 aggacctcgt cgtagacacg gtcgacggcg acgggggcga gaccgaggga gatctcgtcg
     2161 aggagggcga agcgggggcg cccgaccagc agccggccga gggcgacgat gacctgttcc
     2221 ccgccggaga gcgacccgac cggccgggcc ttccaccggg ccagctgggg gaaccgggtc
     2281 tccacgtcgg ccagggcggt gcgcacttcg gccgacgggc ggccgtaggc gccgagggcc
     2341 aggttctgcc ccacggtcag ccggcggaac aggccccgcc cctggggcac gtggatcacg
     2401 cccaccgatc ggaggacggc gggatcggag accaccagcc cgtccaccga caccgtgccg
     2461 ccgtgcggca ccagccccga catcgcccgc aggacactgg tcttgccggc gccgttgggg
     2521 ccgagcaacg cggtgatccg gcccggttcg atgcggacgg agaggtcgac gacggcctgc
     2581 acgccgccgt aggccacgct cagctcacgg ccttcgagca cggtcacccc cgatcggcgt
     2641 ctcttcgagg aggtgggcgc tcgtgccgag ataggcggcg atcaccgccg ggtcggcggc
     2701 gatctccgcc ggcgtgccct cggccaggac gccgccctgg tcgaggacga tgacgcgctc
     2761 cgccagccgc cccacgacgg ccatgtcgtg ctcgaccagc aggacggtga ggccaagttc
     2821 ggcccgcagc tcgtcgagga ggtcgcagag ggcgtcggcg tccgccgcgc ccatgccggc
     2881 ggtgggctcg tcg
//
LOCUS       DATGJT010000290         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1283712, whole genome shotgun sequence.
ACCESSION   DATGJT010000290 DATGJT010000000
VERSION     DATGJT010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1283712"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VKX24_04970"
     CDS             complement(<1..400)
                     /locus_tag="VKX24_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013732405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HLJ07866.1"
                     /translation="MKRQIGVPHRFVRRRAALWLLAACLGGLAVGGLLHAFGLGGAGD
                     RTWAAVGSVGAAYSAWTTLLMLWRRRLGVDLIAVAALVGALAVGENLAAAVIAVMVTT
                     GSTLEDWASRRAERNLRSLLERAPRSAHRYK"
     gene            588..1856
                     /locus_tag="VKX24_04975"
     CDS             588..1856
                     /locus_tag="VKX24_04975"
                     /inference="COORDINATES: protein motif:HMM:NF022112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gmad2 immunoglobulin-like domain-containing
                     protein"
                     /protein_id="HLJ07867.1"
                     /translation="MAILTPHLPAPTGDEQRGGRGPRRWWLFGLVTVLAATGLVIGLL
                     VTTSGNAPQTTPSTQPTTTAASGTTTSAPATTVPALVPNEADAVYPSPGSGTRFADPV
                     PAARSFASDFVGFARPVLGRFVATGVQTGTVAVRSTSGGAVTTVRLAHIAGSWWVLGA
                     STPHIRLDAPVASGAVASPMRLRGMSTAFEAQVNVEVREDGQRTPIGTGRLVGGSMGV
                     MAPFDASVAFGGPSSQRGALVLFTVSMKDGTLYEATVVRVAFVPAATLVPASACPNYT
                     MERPTAPAGEMVVTVFYSCGVDGPPVPTYRLYPPTTAVLRTALDQLFAGPSAQERAAG
                     LTSWFSTSTAGYVRSVTLSSGKATVDLADLRPVIPNASASAGSHLLLAQLDATVFQFA
                     TVTSVIYEIDGSCQTFGEWLQLNGCIARTR"
BASE COUNT          275 a          748 c          729 g          275 t
ORIGIN      
        1 ccttgtaccg gtgggcggac cggggcgcac gctcgagcag cgagcggagg tttcgctcgg
       61 cacggcggga tgcccagtcc tccagggtgg aaccggtggt gaccatgacc gcgatgacgg
      121 cggcggcgag gttctcgccg acggccagag cgccgacgag ggcggcaacg gcgatgaggt
      181 cgacgccgag ccggcgccgc cacagcatga ggagcgtcgt ccacgccgag taggcggcgc
      241 cgacgcttcc gaccgcggcc caggtccggt cgccggcccc gcccagcccg aaggcgtgca
      301 ggaggccacc caccgccaat cccccgagac aggcggcgag gagccaaagg gcggcacggc
      361 ggcgcacgaa ccggtgtgga acgccgatct gccgcttcac cttgcgatcc tcccccgggg
      421 gcgagccgtc agacaggacc gaaggtccct tttccgtgtc cgcccgtcca ctggcgccga
      481 ccgcgcgccg gcgggggagg tggcccggtc gggcagggac catcggctct accacccgcg
      541 accgggcggc tccaccctgg atccatagcg gcaccaggag gtgtcacatg gcgatcctta
      601 ctccccatct gcccgctccg accggcgatg agcagcgcgg cggccgaggt ccgcggaggt
      661 ggtggctgtt cggcctcgtg accgtgctcg ccgcgaccgg cctggtgatc ggtctgctgg
      721 tgacgacgag cggcaacgcc ccccagacaa ccccgtcgac ccaaccgacc acgaccgcgg
      781 cgtccgggac gaccacgagc gcacccgcga ccacggttcc ggcgctggtc ccgaacgagg
      841 ctgatgcggt gtacccgtca ccgggctcgg gaacgcggtt cgcggacccg gtgccggccg
      901 cccgcagctt tgcgagcgac ttcgtcggct tcgcccggcc ggttctcggg cggtttgtcg
      961 cgaccggtgt ccagaccggg acggtcgccg tgcgatcgac ctccggcggg gcagtcacga
     1021 cggtccggct ggcgcacatc gccggcagct ggtgggtgct cggtgcatcg acaccacaca
     1081 tccgcctcga cgcgccggtg gcatcgggtg cggtggcgtc gccgatgcgc ctccggggga
     1141 tgagcacggc gttcgaggcc caggtgaacg tcgaggtccg ggaggacggc cagcgtacgc
     1201 ccatcgggac gggccgcctc gtgggcgggt cgatgggggt catggcgccg ttcgacgcca
     1261 gcgtggcctt cgggggcccg agctcccaac gcggtgccct ggtcctcttc accgtctcga
     1321 tgaaggacgg cacactctat gaggcgacgg tcgtccgggt ggccttcgtc ccggcggcga
     1381 ccctcgtccc cgcctcggcc tgccccaact acaccatgga gcgcccgacg gccccggccg
     1441 gcgagatggt ggtcacggtc ttctactcgt gcggagtgga cggcccgccc gtccccacct
     1501 accgcctcta cccgccgacc accgcggtgc tccggacggc tctcgaccag ctcttcgccg
     1561 ggccgagcgc ccaggagcgg gccgccggcc tcacgagctg gttctccacg tcgaccgccg
     1621 gctacgtgcg gagcgtcacc ctcagctcgg gcaaggcgac ggtcgacctg gccgacctgc
     1681 gcccggtgat cccgaacgcg agcgcgagcg ccggttcgca cctgctgctg gcccaactcg
     1741 acgcgaccgt cttccagttc gcgaccgtca cctcggtcat ctacgagatc gacggcagct
     1801 gccagacctt cggcgagtgg ctgcagctga acgggtgcat cgcacggacg cggtgagcgt
     1861 cgtcggcgcc ccgtgccacg gacgaccggg gggctgcccg agtaatcggg tcgtcgccga
     1921 cccggtcagc agcggctact ggtgtcggag ggccaggacc gcggcggtcg cggccagctt
     1981 gtggtccttc tgccaaggcg gcccgagggc ccttccggcc cgctcga
//
LOCUS       DATGJT010000291         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1076250, whole genome shotgun sequence.
ACCESSION   DATGJT010000291 DATGJT010000000
VERSION     DATGJT010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1076250"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VKX24_04980"
     CDS             complement(<1..401)
                     /locus_tag="VKX24_04980"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ07868.1"
                     /translation="MAGAAVAAAAVAANPALRDEARRLRRMARPLGVEPPGPPIPPPL
                     PPGRIVHLPGRGETFVRDTGPPPADGPAPGPPVLLLHGWTASADVNFFAVFPELAGRH
                     RAVALDHRGHGRGLRPRTPFSLEDCADDAAAL"
     gene            734..1591
                     /locus_tag="VKX24_04985"
     CDS             734..1591
                     /locus_tag="VKX24_04985"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ07869.1"
                     /translation="MPPTSMAAMIERITLEADLRDALVAGDLVLRYQPIVDLATGRTL
                     ALESLCRWRHWSRGLLGPADFLPLAEETGLIVPLGAWVMTETCRRMAVWRSRLAEADA
                     VLATVNLSAAEVRHPGLVDRAAQALDAAGLPAGRLLVEISEATVGEDDRAPTERNLRA
                     LVELGVGLAVDDVGAPRPGARSGLPDPDGWLWSLPVRMLKIDRSVAAGLGHGPGSRAG
                     RALSAALGLAVERGIPAVAKGIETPDQLARFHRLGCGGGQGFLFARPLDPADVAGHLR
                     RTGDAPRPA"
     gene            complement(1593..>2441)
                     /locus_tag="VKX24_04990"
     CDS             complement(1593..>2441)
                     /locus_tag="VKX24_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014431750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HLJ07870.1"
                     /translation="FVNQAGLAVELTVARPGGSGPRTVVVSTLRDDRPARYREWVSTN
                     RARVHEATGGRVGYVHLPDMGARGYAEFHRSYLAEVEHEALIVDVRFNGGGHVSQLVL
                     EKLARRRIGYDVSRWGEPEPYPADSPAGPLVALTNEHAGSDGDIFTHCFKLLGLGPVV
                     GKRTWGGVIGISPRHALVDGSLTTQPEYAFWFSDVGWSVENYGTDPDVDVDIRPQDHV
                     AGRDPQLDKAVELALAALREHRPLAADLAQRPRLALPTLPPRTSASPNGERPAEKPVR
                     AGRKRS"
BASE COUNT          294 a          904 c          942 g          301 t
ORIGIN      
        1 agcgcggcgg catcgtcggc gcagtcctcc agcgagaacg gcgtgcgggg ccgcagtccc
       61 cgtccgtggc cccggtggtc gagggccacg gcgcggtggc ggccggccag ctcggggaag
      121 acggcgaaga agttgacgtc ggcgctggcg gtccagccgt gcaggaggag caccggcggg
      181 ccgggggccg ggccgtcggc cggcggcggg ccggtgtcgc ggacgaaggt ctcgccccgc
      241 ccggggaggt ggacgatccg gccgggcggg agcggcggcg gaatgggcgg gcccggcggt
      301 tcgacgccga gcggtcgggc catccggcgg aggcggcggg cctcgtcacg gagggcgggg
      361 ttggccgcta ccgcggcggc ggccacggcg gccccggcca ccgcccctcc ggcggcgagc
      421 agtttgacgg tccggctggc ggaggccaac ggcgcaggcc gctcagatga acgagaagcc
      481 ggtgaacacg gcgctgagcg taccgatccc ggcgaagagg acgatcacca gcagggcgac
      541 gacggccagc ctgcgctcgc gttccgacaa ctccatcgtt ggtccccccc ggttccgccc
      601 gcaggacctc tgcccttacc ggcagattgg tgtcatatcg gtcagatcgc cgccgggctt
      661 gagcggcggc tatgggcggg cctcgccggg ccgatcgaag aggacgaccg ccctctcccg
      721 gagagaaccc cgcatgccgc ccacctcgat ggccgccatg atcgagcgca tcacgctgga
      781 ggccgacctc cgcgacgccc tcgtggccgg cgacctcgtc ctgcgctacc agccgatcgt
      841 cgacctggcc accggccgga ccctggccct ggagtcgctc tgccgctggc ggcactggtc
      901 ccgggggctg ctcggccccg ccgacttcct gccgctggcc gaggagaccg gcctcatcgt
      961 cccgctcggg gcgtgggtga tgaccgagac ctgccggcgc atggccgtct ggcggagccg
     1021 gctcgccgaa gcggacgccg tcctcgcgac ggtcaatctg tccgcagccg aagtccgcca
     1081 ccccggactc gtcgaccggg ccgcgcaggc cctggacgcc gccgggctgc cggccgggcg
     1141 cctgctcgtc gagatcagcg aggcgacggt cggtgaggat gaccgggccc ccaccgagcg
     1201 caacctccga gccctcgtgg agctcggcgt cggcctggcg gtcgacgacg tcggagcgcc
     1261 ccgcccgggc gcccgcagcg ggctccccga ccccgacggc tggctgtgga gcctgcccgt
     1321 ccggatgctc aagatcgacc gcagcgtggc cgccggcctc ggacacggcc cgggcagccg
     1381 ggcggggcgg gcgctgagcg ccgccctggg gctggccgtt gagcggggca tcccggcggt
     1441 ggccaagggg atcgagactc ccgaccagct ggcccgcttc caccggctgg gctgtggcgg
     1501 cgggcagggc ttcctcttcg cccggccgct cgacccggcc gacgtcgccg gccacctccg
     1561 ccggacgggc gacgcccccc gtcccgccta gttcagctcc gtttccgtcc cgcccggacg
     1621 ggcttctcgg ccgggcgttc cccgttcggc gacgccgagg tccgcggcgg caacgtcggc
     1681 agggccagcc tcggccgctg ggcgaggtcg gcggccagcg gccggtgctc ccgcagcgcc
     1741 gccagcgcca gctccaccgc cttgtcgagc tgcgggtcgc ggccggcgac gtggtcctgg
     1801 gggcggatgt cgacgtcgac gtcggggtcg gtgccgtagt tctccacgct ccagccgacg
     1861 tcggagaacc agaaggcgta ctccggctgg gtggtgaggc tgccgtcgac gagggcgtgc
     1921 cggggggaga tcccgatgac cccgccccag gtgcgcttgc cgaccaccgg cccgaggccg
     1981 agcagcttga agcagtgggt gaagatgtcg ccgtcggagc cggcgtgctc gttggtcagc
     2041 gccaccagcg gcccggccgg cgagtcggcc ggatagggct cgggctcgcc ccaccggctg
     2101 acgtcgtagc cgatgcggcg gcgggccagc ttctccagca ccagctggct cacgtggcct
     2161 ccgccgttga agcggacgtc gacgatcagc gcctcgtgct ccacttcggc caggtacgaa
     2221 cggtggaact cggcgtagcc ccgggccccc atgtcgggga ggtggacata gccgacccgg
     2281 ccgccggtcg cctcgtggac ccgggcccgg ttggtcgaca cccattcccg gtaccgggcc
     2341 gggcggtcgt cgcgcagcgt cgagacgacg accgtgcgcg ggccggagcc gccgggccgg
     2401 gcgacggtga gctccacggc caggccggcc tggttgacga a
//
LOCUS       DATGJT010000292         2962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_558275, whole genome shotgun sequence.
ACCESSION   DATGJT010000292 DATGJT010000000
VERSION     DATGJT010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558275"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VKX24_04995"
     CDS             <1..248
                     /locus_tag="VKX24_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011755782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HLJ07871.1"
                     /translation="VQARRCLEIVLGALEEAGASAGDVVRTRMFLVDVADAEAVGAVH
                     GEVFGSIRPASTMVAVSALLDPRWKVEIEAEALVDQS"
     gene            complement(319..1095)
                     /locus_tag="VKX24_05000"
     CDS             complement(319..1095)
                     /locus_tag="VKX24_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07872.1"
                     /translation="MASVLLWLLWGGVLLASFAPRPLGLTGLRVAAPLAVLLAVVAAP
                     GAGPLKAALAVAGTALACGLAFTPAVGYRFVNGAAYGEERRFPLRVPPALALGPLPLA
                     VVLIGAGTVAGPLLLADRRWVVGAIALAAGVPVVRVAGRSVYSLSQRWAVLVPAGIVL
                     KDPLTLVDPVLFPRERIASLRPLPFPTAPAEDVVDLRLGAVPGSLVLELTEEAQLFRS
                     RGRLRGGESVKALRIAFCPRQTARLLAEAAARKKPRGSVL"
     gene            1277..2599
                     /locus_tag="VKX24_05005"
     CDS             1277..2599
                     /locus_tag="VKX24_05005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HLJ07873.1"
                     /translation="MADVRLVDLEVLKRFSLVLRREYADAEDVLAALDTSRGLVLAAL
                     GRPAPAKSAGTTKAPAKGAVKATRAPARAAPAKTAAKAAPGKAGGAAKAAATKAPAAG
                     KASPAKGVAGKGPGPVKTTPGKAAAASGKAAPGPPGSKAAGPAAKSPAGATARATGAA
                     STAAKAPPTRASAAPAAKASAAPAKAPGSPAAKAPAPAAKAPAAPAAKAPGPPAAKTP
                     AAPAARAPGSPAAKAQAAPAAKAPAAPVAKAPAAPAAKAPGSPAAKPPAVPGAGRAPG
                     GGPVPAPSPAPARPTTGASLFPKAPGPSKPAPAKRPAQNPLGASLFAEPETRPAPPRA
                     PGPSSAGPAGPAAAPAGPARPAAPAGPGARPPASPGTTAPGGSGAGSTGAWSPPGSPS
                     PAEPTPGRAQPSGPAGAGGTPADAPPSGAVSLPHPPRPDTDDKRDDGD"
     gene            complement(2627..>2962)
                     /locus_tag="VKX24_05010"
     CDS             complement(2627..>2962)
                     /locus_tag="VKX24_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07874.1"
                     /translation="FLPLLAPGATVVLVAEDADPDTAAPGSPGPDRQARRALAAMLAE
                     AIVQDCGPAGIRAAVIGEDRGPDEIAALAAQRPVQPRPWWHYADVDPELDFADWRNSV
                     LCLASVQDG"
BASE COUNT          385 a         1150 c         1176 g          251 t
ORIGIN      
        1 ccgtgcaggc ccggcggtgc ctggagatcg tcctcggcgc cctggaagag gcgggcgcct
       61 cggccggcga cgtcgtccgc acccggatgt tcctggtcga cgtggccgac gccgaggccg
      121 tcggggccgt ccacggcgag gtcttcggtt cgatccgccc ggcgtcgacg atggtcgccg
      181 tctccgccct gctcgacccc cgctggaagg tcgagatcga agccgaggcg ctggtcgacc
      241 agtcgtgacg acggttctcg gcacggtttg ccgcggattc cgcggttttt cctgccgaga
      301 tccgggtgga gggcggagtc agagcaccga gccccggggc ttcttcctcg ccgccgcctc
      361 ggccagcagg cgggcggtct ggcgggggca gaaggcgatg cggagggctt tcaccgactc
      421 cccgccccgc aggcggcccc gggaccggaa cagctgcgcc tcctcggtca gctcgaggac
      481 gagcgagccc gggacggcgc cgagccgcag gtcgacgacg tcctcggcgg gggcggtggg
      541 gaagggcagg ggccggaggg aggcgatgcg ctcccggggg aagaggacgg ggtcgacgag
      601 cgtcagcggg tccttgagga cgatgcccgc cgggaccagc accgcccacc gctgcgagag
      661 cgagtagacc gaccggccgg cgacccgcac caccgggacg ccggcggcca gcgcgatcgc
      721 cccgacgacc cagcgccggt cggccaggag cagcgggccg gccacggtgc cggcgccgat
      781 gaggacgacg gccagcggca gcggccccag cgccagggcc ggcggcaccc ggagcgggaa
      841 gcgccgctcc tcgccgtagg cggcgccgtt cacgaaccgg tagccgaccg ccggcgtgaa
      901 ggccaggccg caggccaggg cggtcccggc cacggccagc gccgccttga gcggcccggc
      961 gcccggggcg gccaccaccg ccagtaacac ggccagcgga gcggcgaccc gcaggccggt
     1021 gagccccagc ggacgggggg cgaacgaggc caggaggacg ccgccccaca gcagccagag
     1081 caggacgctg gccacggccc ggggcgcggt ggaccaggag tcgagcgcag cagcggcggc
     1141 cggcccggcg acgacgacca gggacgccca ggccaggggt tgaagccgga cgagcagagg
     1201 aggctcccag gaggcgcgag gggtggctcg tatactaccg acagtcgttt ttcaaccttc
     1261 tgcaccggga gcgcccgtgg ccgatgtccg actcgtcgat ctcgaggtgc tgaagcgctt
     1321 cagtctggtg ctgcggcggg agtacgccga cgccgaagac gtcctcgccg ctctggacac
     1381 gagccgcggc ctggtgctcg ccgccctcgg ccggccggcg ccggccaagt ccgccggcac
     1441 gaccaaggcc ccggccaagg gggcggtcaa ggccaccagg gcgccagcca gggcggcgcc
     1501 ggcgaagacc gccgccaagg ctgcgccggg caaggccggc ggagcggcga aggccgcggc
     1561 gacgaaggca ccggcggcgg ggaaggcctc cccggccaag ggcgtggccg ggaaaggccc
     1621 ggggccggtc aagacgacgc cgggcaaggc ggcggcggcg tccgggaagg cggcgccggg
     1681 cccgccgggg tcaaaggccg ccgggccggc ggccaagtcg ccggccgggg ccaccgcccg
     1741 ggccaccggc gcggcctcca cggcggcgaa ggcgcccccg accagggctt cggcggcacc
     1801 ggcggcgaag gcgtcggcgg caccggcgaa agcccccgga tccccggctg ccaaggcgcc
     1861 tgcgccggcc gccaaggctc cggctgcgcc cgcggcgaag gcgcccgggc ctccggccgc
     1921 caagactccg gctgcgcccg cggcgagggc gcccggatct ccggccgcca aggctcaggc
     1981 tgcgccggcg gcgaaggccc cggctgcgcc cgtggcaaag gcgccggctg cgcccgcggc
     2041 gaaggcccct ggatccccgg ccgccaagcc cccggctgtg ccgggggccg gcagagcgcc
     2101 gggcggcgga ccggtccccg ctccatcgcc cgccccggcc cgcccgacca ccggggcgtc
     2161 gctcttcccg aaggcccccg ggccgtccaa gccggcgccg gccaagcgcc cggcccagaa
     2221 cccgctgggg gcgtcgctct tcgccgagcc cgagacccgc cccgcgccgc cccgcgcccc
     2281 cggcccttcg tccgccggtc cggcagggcc cgccgccgcg cccgccggtc cggcccggcc
     2341 cgccgcgccc gccgggccgg gggcacggcc gccggcgagt ccgggtacga cggcgccggg
     2401 agggtccggc gccggctcga ccggcgcctg gtcgcctccg ggcagccctt cgccggcgga
     2461 accgacccct ggccgcgccc agccgtccgg gccggccggc gccggaggaa caccggccga
     2521 cgccccaccg tcgggcgccg tctcgcttcc gcacccgccg aggcctgata ccgacgacaa
     2581 gcgcgacgac ggcgactagg gcccgaatga cggacggcgc gagggcctag ccgtcctgga
     2641 ccgacgccaa gcagagcacc gagttccgcc agtcggcgaa gtccagctcc gggtcgacgt
     2701 cggcgtagtg ccaccacggc cggggctgca ccggccgctg ggcggccagg gcggcgatct
     2761 cgtcggggcc ccggtcctcg ccgatgacgg cggcccggat cccggccggc ccgcagtcct
     2821 gcacgatcgc ctcggccagc atcgccgcca gcgcccggcg ggcctgccgg tcggggccgg
     2881 gagagcccgg ggcggcggta tcggggtcgg cgtcctcggc gacgaggacg acggtggcgc
     2941 cgggcgccag cagagggagg aa
//
LOCUS       DATGJT010000293         3261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_39021, whole genome shotgun sequence.
ACCESSION   DATGJT010000293 DATGJT010000000
VERSION     DATGJT010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39021"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VKX24_05015"
     CDS             <1..232
                     /locus_tag="VKX24_05015"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ07875.1"
                     /translation="DSMVIDRLADIRCPVVVISGADDLPIYQTGAKYLSERLPSARLV
                     VIDGAGHEPHLDRPDEVTAAVRAHPVLLGAGR"
     gene            complement(278..697)
                     /locus_tag="VKX24_05020"
     CDS             complement(278..697)
                     /locus_tag="VKX24_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020420624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HLJ07876.1"
                     /translation="MTLGDADGIVQAAHEVAVERGYPPLAVAVVDVAGEVVVLRRADG
                     GLPMSSRVAVAKARSALVALKPSGQLDQLPPGIIAALQGIYGGDFVPRAGGVLVTDAG
                     GDVVLGAVGASGATSDQDEDAVRTAVERWQAEAGRAG"
     gene            complement(728..2452)
                     /locus_tag="VKX24_05025"
     CDS             complement(728..2452)
                     /locus_tag="VKX24_05025"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HLJ07877.1"
                     /translation="MDDRVTIGTLADLRRAGCLTGKAGTQPVCVFWSDGAPFALDDRC
                     PHMGFPLHRGSVESGLVTCHWHNARFDLRSGGTLDPWADDVRSYPVEIDGDRVVVVVS
                     PEPDRRSHLQQRLEEGLEQGISLVMAKAVLGLLEAGVPAEEIVRTGVAFGTRYREAGW
                     GAGLTVLTAMANVLPHLEPADRPLALVAGLAFVARDTRGRPPRFPLSPLRGGPPADRL
                     GAWYRRFIETRSADAAERTLASAIATGDRTAVADIMLAAVTDHVFLDGGHTLDFTNKA
                     FEVLDHLGWDRAGEVLTTLVAQTASAARSEERGAWRYPHDLAGLLATAAERLPERLAA
                     GSACAVRFDDGDGAAVARLAWSLLSDDPAEVVGAVDDAILAGARPEELGRAVAYAAAL
                     RITRFHTQNDHADWDEVHHAFTAANALHQALRRSPSPALLRGVYHGALRIYLDRFLNI
                     PAARLPGPGPSDLGDLQACWDREGGVDEAGAIVYRHLSGGGDPAPVIALLGRALLTED
                     AEFHWYQTYEAAVRQYHAWPAGSQEGALILAGTARFLAAHTPTRRELAQVVTIATRLR
                     RGEALFEA"
     gene            2544..>3261
                     /locus_tag="VKX24_05030"
     CDS             2544..>3261
                     /locus_tag="VKX24_05030"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07878.1"
                     /translation="MRIAVLVKQVPAFTEMELDDHGRLIRAGLPLELNPYCRRAVSQA
                     VELARARPGGPAAPAGPAGPGPARPAGPATVTVVTLGPPSAEDALREAIAWGLERGVD
                     VDGLLVTDPAFAGSDTLATARALAAALELAGPFDLVLAGRNSVDSETGQVPPELAELL
                     GLPFLTGVRTLEVDAPDGRPAPGGPDGGTGGPGATTVRARCEHDDGWVEAEVDLPALL
                     SCAERLIEPAKVDTAGRAAVP"
BASE COUNT          379 a         1213 c         1298 g          371 t
ORIGIN      
        1 cgactcgatg gtcatcgacc gcctggccga catcaggtgc ccggtcgtgg tcatctccgg
       61 ggcggacgac ctgccgatct accagaccgg ggcgaagtac ctctcggagc ggctgccgtc
      121 ggcccggctg gtggtcatcg acggcgccgg gcacgaaccc cacctcgacc ggcccgacga
      181 ggtgactgcc gccgtgcggg cccaccccgt cctcctcggc gccggccgct gacgggctga
      241 cggcggccgg cggccggctg acggctgccg gcggcgttca gcccgcccgc ccggcctccg
      301 cctgccagcg ctcgacggcg gtgcggacgg cgtcctcgtc ctggtccgat gtcgcccccg
      361 aggccccgac ggcgccgagg acgacgtcgc cgccggcgtc ggtcaccagg acgccgcccg
      421 cccggggcac gaagtcgccg ccgtagatcc cctggagagc ggcgatgatg cccgggggga
      481 gttggtcgag ctggcccgac ggcttgagcg cgaccagcgc gctgcgggcc ttggccaccg
      541 ccacccggct ggacatcggc aggccgccgt cggcccggcg gaggacgacg acctcgccgg
      601 ccacgtcgac caccgccacc gccaggggcg ggtagccccg ctcgacggcg acctcgtggg
      661 ccgcctgcac gatcccgtcg gcgtcgccga gcgtcagacc ggggagcccg gggcatggcc
      721 ggggagccta cgcctcgaag agcgcctcgc cccgccggag ccgggtggcg atcgtgacga
      781 cctgggccag ctcccggcgg gtcggcgtgt gggcggccag gaaccgggcg gtgccggcca
      841 ggatcagcgc cccctcctgc gaacccgccg gccaggcgtg gtactggcgc accgccgcct
      901 cgtaggtctg gtaccagtgg aactcggcgt cctcggtgag cagcgcccgg ccgagcaggg
      961 cgatgacggg ggccgggtcg ccgccgccgg acaggtggcg gtagacgatc gccccggcct
     1021 cgtcgacccc gccttcccgg tcccagcagg cctgcaggtc ccccaggtcg gacggccccg
     1081 gcccggggag ccgggcggcg gggatgttga ggaagcggtc gaggtagatc cgcagcgcgc
     1141 cgtggtacac gccccgcagc agcgccggcg acggcgagcg ccgcagcgcc tggtggaggg
     1201 cgttggcggc ggtgaaggcg tggtggacct cgtcccagtc ggcgtggtcg ttctgggtgt
     1261 ggaaccgcgt gatccgcaag gccgcggcgt aggccacggc ccgccccagc tcctccggcc
     1321 gggcgccggc caggatggcg tcgtcgaccg caccgaccac ctcggccggg tcgtcggaga
     1381 ggagcgacca ggcgaggcgg gcgaccgccg cgccgtcgcc gtcgtcgaag cggacggcgc
     1441 aggccgagcc ggccgccagc cgctccggca gccgttcggc ggccgtggcg aggaggccgg
     1501 cgaggtcgtg gggatagcgc cacgcccccc gttcctcgct gcgggcggcg gaggccgtct
     1561 gggccaccag cgtggtgagg acctcgcccg cccggtccca gccgaggtgg tcgagcacct
     1621 cgaacgcctt gttggtgaag tcgagcgtgt gcccgccgtc gaggaagacg tggtcggtga
     1681 ccgccgccag catgatgtcg gcgacggcgg tgcggtcgcc ggtggcgatg gccgaggcca
     1741 gcgtccgttc ggcggcgtcg gccgagcggg tctcgatgaa gcgccggtac caggcgccga
     1801 ggcggtcggc gggcggcccg ccccggagcg gcgacagcgg gaaccggggc ggccggcccc
     1861 gggtgtcgcg ggccacgaag gccagcccgg ccaccagggc cagcggccgg tcggcgggtt
     1921 cgaggtgggg caggacgttg gccatggcgg tgaggacggt gaggccggcg ccccagcccg
     1981 cctcccggta ccgggtgccg aaggccacgc ccgtccggac gatctcctcc gccggcacac
     2041 cggcctcgag cagcccgagc accgccttgg ccatgacgag gctgatcccc tgctccagcc
     2101 cctcctccag ccgctgctgg aggtgggagc ggcggtcggg ttcgggggag acgaccacca
     2161 cgacccggtc gccgtcgatc tcgaccgggt aggagcgcac gtcgtcggcc caggggtcga
     2221 gggtgccgcc ggagcggagg tcgaagcggg cgttgtgcca gtggcaggtc accaggccgc
     2281 tctccacgct cccccggtgg agcgggaacc ccatgtgggg gcagcggtcg tcgagggcga
     2341 agggcgcccc gtcgctccag aagacgcaga ccggctgggt gccggccttg ccggtcaggc
     2401 agccggcccg ccgcaggtcg gcgagcgtgc cgatcgtgac ccggtcgtcc acggcgcttc
     2461 tcccgccttc gatgcctcgt tccccgggca ggctaacggc ggtacccagg cccccgaacg
     2521 gcggggcgta gcgtggggcc ggcatgcgga tcgccgtcct cgtcaagcag gtccccgcct
     2581 tcaccgagat ggaactcgac gaccacggcc gcctcatccg ggccgggctg ccgctggagc
     2641 tgaaccccta ctgccggcgg gcggtttccc aggcggtgga gctcgcccgg gcgcggcccg
     2701 gcgggccggc ggcaccggcg gggccggccg ggccggggcc ggcgcggccg gccgggccgg
     2761 cgacggtgac cgtggtcacg ctggggccgc cgagcgccga ggacgccctc cgcgaggcga
     2821 tcgcctgggg cctggagcgc ggcgttgacg tcgacgggct cctcgtcacc gaccctgcct
     2881 tcgccggttc cgacacgctc gccaccgccc gggccctggc ggcggcgctg gagctcgcgg
     2941 ggccgttcga cctcgtcctg gccgggcgga actcggtcga cagcgagacg gggcaggtgc
     3001 cgcccgagct ggccgagctg ctcggtctgc cgttcctcac cggcgtgcgg accctggagg
     3061 tcgacgcgcc ggacgggcgg cccgcgccgg gcgggccgga cggcggcacc ggcgggccgg
     3121 gcgccacgac agtgcgcgcc cggtgcgagc acgacgacgg ctgggtcgag gccgaggtcg
     3181 acctcccggc cttgctgtcc tgcgccgagc ggctgatcga gccggccaag gtcgacaccg
     3241 ccggccgggc ggcggtgccg g
//
LOCUS       DATGJT010000294         2538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_39191, whole genome shotgun sequence.
ACCESSION   DATGJT010000294 DATGJT010000000
VERSION     DATGJT010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39191"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VKX24_05035"
     CDS             complement(<1..207)
                     /locus_tag="VKX24_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009154746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07879.1"
                     /translation="MAVVRSSGAPAVPVAPTITGALELPRIVELGPNLYGAAFSLMKL
                     LPARHILDRARDSGLLEPGTVVIES"
     gene            complement(284..844)
                     /locus_tag="VKX24_05040"
     CDS             complement(284..844)
                     /locus_tag="VKX24_05040"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CGNR zinc finger domain-containing protein"
                     /protein_id="HLJ07880.1"
                     /translation="MNFDAYTDLSVVTAVDLVNTLDVETGKDYLTEPEHLAKFLDDHL
                     DSYARPLTRSDVTEVQGLRERLRLAFTLGSIDTVVDLLNDLLAESSALPQLTDHDGVW
                     HFHFTPPESSLFAHMAAEAAMGLASVIRDHGLERLRVCAANGCSRVFVDTSRNRSRRY
                     CNPDICGNRTNVAAFRARQRATEGSG"
     gene            992..2176
                     /locus_tag="VKX24_05045"
     CDS             992..2176
                     /locus_tag="VKX24_05045"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ07881.1"
                     /translation="MGQSPFARLALTHALAIGADTLVAIALAGSIFFSATLAAARPKV
                     LLYLGITMVPFAVVAPVMGPALDRTKGGRRFMVAVFALGRAVLCVFMANHLKSLLFYP
                     AAFGALALSKGYQVAKSALVPAVVPDETALVEANSRLALIAVLAGVALGPVGAGLQTL
                     VGASWVLRLAAVVNLVSVVTAFRIPKAARTAPPVQPAEQAELHAASIRLAATAMTVLR
                     AAVGFLTFLAAFELKSSGAPSWLFGLVIGAGAFGGFVGALVAPRLRRVMREETILVGS
                     LLVPAVVTLFGARSFGNAAIAVVASAVAVGAAAGRLAFDSLVQRDAPEAARGRTFARF
                     ETRFQLAWVGGAFIPAAIPDLPGRLGFLLLAVGLAFFGLSYLAAVRAAKGASASAEIV
                     PH"
     gene            complement(2153..>2538)
                     /locus_tag="VKX24_05050"
     CDS             complement(2153..>2538)
                     /locus_tag="VKX24_05050"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020541653.1"
                     /note="catalyzes the formation of
                     3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from
                     phosphoenolpyruvate and D-erythrose 4-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HLJ07882.1"
                     /translation="YAASSGNLDIILCERGIRTFEPATRNTLDLSAVSVVQQKSHLPV
                     IVDPSHGTGSRSLVAPMTLAAVAAGCDGIMIDVHPHPEQARCDGPQALLPDELSALAE
                     RMWQLAAWMGRDVPASVASVGHDLG"
BASE COUNT          304 a          901 c          949 g          384 t
ORIGIN      
        1 cgactcgatg accacggtgc ccggctcgag cagcccgctg tcccgggccc ggtcgaggat
       61 gtgccgggcc gggaggagct tcatcaggct gaaggcggcg ccgtagaggt tggggccgag
      121 ctcgacgatc cggggcagct ccagcgcccc ggtgatcgtc ggggcgacgg ggacggcggg
      181 ggcgccggag gagcggacca cggccacggc gcggacggta aacccgttgg gcgaacgggc
      241 gccgggcggc gggggacggt tgggtgaacg gccggggagg tcttcagccg gagccttcgg
      301 tggcccgctg ccgggcccgg aaggcggcga cgttggttcg gtttccgcag atgtcgggat
      361 tgcagtagcg gcgggaccgg ttgcgggagg tatcgacgaa gacgcgggag cagccgttgg
      421 cggcgcagac ccggaggcgc tccaggccgt ggtcgcggat gacgctggcc aggcccatgg
      481 ccgcctcggc cgccatgtgg gcgaacagcg acgattcggg cggggtgaag tggaagtgcc
      541 agaccccgtc gtgatcggtc agttggggga gagcactcga ttcggccagc aggtcattga
      601 gcagatcgac gacggtgtcg atgcttccga gcgtgaaggc cagtcgcagc cgctcccgca
      661 ggccctggac ttcggtgacg tcggagcgcg tcagcggccg ggcgtagctg tcgaggtggt
      721 cgtcgaggaa cttggccaga tgctccggct cggtgaggta gtccttcccc gtctcgacgt
      781 cgagcgtgtt gacgaggtcg acggcggtga cgaccgacag gtcggtatag gcgtcgaagt
      841 tcactggcgt ccgccccccg ggtccgggct cgccgagcct tggccagtaa ggcccgtccc
      901 cccacgttat ccctttcggc agccgcgagc gaccgccgat ccacgagtag cctagaaggc
      961 caggatgagc cagtcccgcg aagccctgcc gatggggcag agtccgttcg cccgcctggc
     1021 gctcacccac gcgctggcca tcggggccga cacgctggtg gccatcgccc tggccgggtc
     1081 gatcttcttc agcgccaccc tggccgccgc ccggcccaag gtgctcctgt acctcgggat
     1141 caccatggtg cccttcgccg tcgtggcccc cgtcatgggg cccgccctcg accggacgaa
     1201 gggcgggcgg cggttcatgg tggccgtctt cgccctcggc cgggcggtcc tgtgcgtctt
     1261 catggccaac cacctgaaga gcctgctgtt ctatccggcg gccttcggcg ccctcgccct
     1321 gtcgaagggc taccaggtgg ccaagagcgc cctcgtcccg gccgtcgtcc ccgacgagac
     1381 ggcgctggtg gaggcgaact cccgcctggc gctgatcgcc gtcctggccg gcgtggccct
     1441 cgggccggtc ggcgccgggc tccagaccct ggtcggcgct tcgtgggtgc tccgcctggc
     1501 ggcggtggtg aacctcgtct cggtcgtgac ggcgttccgc atccccaagg cggcccggac
     1561 ggcgccgccg gtgcagccgg ccgagcaggc cgagctacac gccgccagca tccgcctggc
     1621 ggccaccgcc atgacggtgc tccgggccgc cgtcggcttc ctcaccttcc tggccgcctt
     1681 cgagctcaag agcagcggcg ctccctcctg gctcttcggg ctggtgatcg gcgccggggc
     1741 cttcggcggc ttcgtcggcg ccctcgtcgc cccccggctc cggcgggtga tgcgggagga
     1801 gacgatcctc gtcgggtcgc tgctcgtccc ggccgtcgtg acgctgttcg gggcccgcag
     1861 cttcggcaac gccgccatcg ccgtcgtcgc ctcggccgtg gccgtggggg cggcggccgg
     1921 ccggctggcc ttcgacagcc tcgtgcagcg cgacgccccc gaggccgccc ggggccgcac
     1981 gttcgcccgg ttcgagaccc gcttccagct cgcctgggtc ggcggcgcct tcatccccgc
     2041 cgccatcccc gacctgccgg gccggctcgg gttcctgctc ctggccgtgg gcctggcctt
     2101 cttcggcctg tcgtacctcg ccgcggtgcg ggcggcgaag ggggcctcgg cgtcagccga
     2161 gatcgtgccc cactgacgcc accgacgccg ggacgtcccg gcccatccac gccgccagct
     2221 gccacatccg ctcggccagc gccgacagct cgtcgggcag cagcgcctgc gggccgtcgc
     2281 aacgggcctg ctcgggatgg ggatggacgt cgatcatgat cccgtcgcag ccggcggcca
     2341 ccgccgccag cgtcatcggc gccaccagcg agcgggaccc ggtgccgtgc gaggggtcga
     2401 cgataacggg caggtgcgac ttctgctgca ccacgctgac cgccgagagg tcgagcgtgt
     2461 tgcgggtggc gggctcgaac gtccggatgc cccgctcgca gaggatgatg tcgaggttgc
     2521 cggaggaggc ggcgtact
//
LOCUS       DATGJT010000295         2091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1387956, whole genome shotgun sequence.
ACCESSION   DATGJT010000295 DATGJT010000000
VERSION     DATGJT010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1387956"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..1145
                     /locus_tag="VKX24_05055"
     CDS             39..1145
                     /locus_tag="VKX24_05055"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HLJ07883.1"
                     /translation="MRAGVLHGGRRSRGVWWAAGTVLAGIIVVLAFDRTALRATWKAL
                     ADLHWWWVVAGIGAEGASMLSAAIGHRRLLRAGGDRIGLRPVVAVAFAGTAIAASVPF
                     AGAQVAAAYSFRQYHRRGIEYAVAGWALAIAWLLSTASFALVLAAGAASSGNLLAAGA
                     GVVTSLVFLAPPVAVILALRYPGVRRLVTRWTESLIARTRRLTGHPKGDLAGTLAAAV
                     DRMAELRLRPARCLQVFSCYLGNWAFDIACFACAIRAAGAPIPWQGFLLAYGAGVTVD
                     SLGLTPGGLGVVETALTAALVACGLRAGTAVTAVLVYRLVSLWMLLAAGWVVMMFLSR
                     VTGLAPGSDPAPPARAPTPVSATAQEPAAAGTAS"
     gene            1152..>2091
                     /locus_tag="VKX24_05060"
     CDS             1152..>2091
                     /locus_tag="VKX24_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07884.1"
                     /translation="MAVTDILERRAPARHAAGGRHESLVWGAGAWLALRVIASVAGWA
                     SLSWLQQGNTVPVAGYTPPVLHGLLRVLAGPWLRADALWYLRIADVGYKGAGGTYAFL
                     PLFPLLVRLVKPVTGGQPLYAGLLVANAACLAGFVWLHAFIKRLAGRRAAQATVVGLA
                     LFPFSFFLVAPYGEPLLLAAGAGALLLAAKDRPVLAGVAGAAAALSRPFGLFIAIPLA
                     AYLLANRRWRRPVWYLAPLGPVAGMAGWLAWSGSQLHDFLGALHIQTVWERTFMLPWA
                     TLDAGVRTWITWKATSFGPYMLMDVGATAFALIVIVV"
BASE COUNT          190 a          775 c          776 g          350 t
ORIGIN      
        1 aagggcgagg gtttgccggt gagggctagg gtttggcgat gagggccggg gtactccacg
       61 gaggccggcg gtcccgggga gtctggtggg cggccggcac cgtgctcgcc gggatcatcg
      121 tggtgctcgc cttcgaccgg accgccctca gggcgacctg gaaggccctg gccgacctcc
      181 actggtggtg ggtggtggcc gggatcggcg ccgagggggc gtcgatgctc tcggcagcga
      241 tcggtcaccg ccgcctgctg cgggccgggg gggaccggat cggcctgcgc ccggtcgttg
      301 ccgtcgcatt cgccggcacc gcgatcgccg cctcggtccc cttcgccggg gcgcaggtgg
      361 cggccgccta ctcgttccgc cagtaccacc gccgaggcat cgagtacgcc gtcgccggat
      421 gggcgctggc gatcgcctgg ttgctgtcga cggcgtcctt cgccctagtc ctggcggccg
      481 gggcggccag ctccggcaac ctgctggccg ccggcgccgg cgtcgtcacc tcgctcgtgt
      541 tcctcgctcc accggtcgcg gtgatcctgg ccctgcgtta cccgggggtg cgccgcctgg
      601 tcacccgctg gaccgagtcg ctgatcgccc ggacccggcg gttgaccggt caccccaagg
      661 gcgacctggc cgggacgctc gcggcggccg ttgatcggat ggccgaactc cggctgcggc
      721 cggcccgctg cctgcaggtc ttcagctgct acctgggcaa ctgggccttt gacatcgcct
      781 gcttcgcctg cgccatccgg gccgccggcg ctccgattcc ctggcagggc ttcctgctcg
      841 cctacggcgc gggggtcacc gtcgacagcc tggggctgac cccggggggg ctcggcgtcg
      901 tcgagacggc gctgaccgcg gccctggtcg cctgcgggct gcgggccggt accgcggtga
      961 cggcggtgct cgtgtaccgg ctggtcagcc tgtggatgct cctggcggcc ggctgggtgg
     1021 tcatgatgtt cctctcccgg gtgaccgggc tcgccccggg atccgatccg gcgcccccgg
     1081 cccgagcccc gaccccggtg tccgctacgg cccaggagcc ggcagccgcc ggcaccgcct
     1141 cctaaccggc gatggcggtc accgacatcc tcgagcggcg ggccccggcc cggcacgccg
     1201 ccggcggccg gcacgagtcg ctggtctggg gggccggcgc ctggctggcg ctccgggtga
     1261 tcgcctcggt ggccggctgg gcttcgctgt cctggctcca gcagggaaac accgtgccgg
     1321 ttgccgggta caccccgccg gttctgcacg gcctcctgcg tgtcctggcc ggtccgtggc
     1381 tgcgggccga cgcactgtgg tacctgcgga tcgccgacgt cggctacaag ggcgccggcg
     1441 ggacctacgc cttcctgccg ctgttcccct tgctggtccg tctcgtcaag ccagttaccg
     1501 gcggccagcc cctgtacgcc gggctgctcg tcgccaacgc cgcctgcctg gccgggtttg
     1561 tctggctgca cgccttcatc aagaggctgg ctggccgccg ggcggcccag gcgaccgtcg
     1621 tcgggctggc cctgttcccg ttctcgttct tcctggtggc gccctacggc gagccgctcc
     1681 tgctggcagc gggcgccggg gcgctcctgc tggccgccaa ggaccggccg gtcctcgccg
     1741 gggtggccgg tgctgcggcc gcgctcagcc ggccgttcgg gctgttcatc gccatcccgc
     1801 tggccgccta cctgctggcc aaccgccggt ggcgccggcc ggtgtggtac ctcgcgccgc
     1861 tcgggccggt ggccggcatg gccggctggc tggcctggtc gggcagccag ctgcacgact
     1921 tcctcggcgc actgcatatc cagaccgtct gggagcggac gttcatgctc ccgtgggcaa
     1981 ccctcgacgc cggggtgcgg acctggatca cctggaaggc gacttcgttc ggcccgtaca
     2041 tgctgatgga cgtcggcgcc accgccttcg ccctgatcgt gatcgtcgtg g
//
LOCUS       DATGJT010000296         2555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_870108, whole genome shotgun sequence.
ACCESSION   DATGJT010000296 DATGJT010000000
VERSION     DATGJT010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870108"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /locus_tag="VKX24_05065"
     CDS             <1..254
                     /locus_tag="VKX24_05065"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379093.1"
                     /note="catalyzes the formation of L-tryptophan from
                     L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HLJ07885.1"
                     /translation="AALAAAGRATYVHCTDAQALEGFKLLSVSEGIVPALEPAHALGW
                     LAEAAGSEIPAGATVLVTLSGRGDKDAHQVADLLGEPLE"
     gene            251..1057
                     /gene="trpA"
                     /locus_tag="VKX24_05070"
     CDS             251..1057
                     /gene="trpA"
                     /locus_tag="VKX24_05070"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020540529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HLJ07886.1"
                     /translation="MNLERHLRARREEGRKLLVPYVTGGLGSAWLDVVRAVADAGADA
                     IEIGIPFSDPVMDGRIIQEASRRAIEIGATPAGIIADLAKVDVGVPTVVMTYYNPVQH
                     YGHERFAASLAASGIDGAIVPDLPLDELVGSPAGDGAEAGSWADAADRSGVETVLLAA
                     LTTPEDRLAAICGRSRGFVYGVSLLGVTGERAKLSEGALEMGRRLKAATDKPVLLGVG
                     LSTPEQAVEASSAADGVIVGSALVRRLLEGGGPEQAGALVDSFRRALDAV"
     gene            complement(1054..1512)
                     /locus_tag="VKX24_05075"
     CDS             complement(1054..1512)
                     /locus_tag="VKX24_05075"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLJ07887.1"
                     /translation="MAEDPWRTQLEAFGSFVRTQRQLAKLSLRELAELARVSNPYLSQ
                     IERGLHEPSIRVIQAIARALDISTETLLAQVGLVGDNDDEGRVHGATEAAISADPYLT
                     DGQREALLAVYRSYVAESRNTIKRGPKTAAPKPKAPPAPETPAGGEPASS"
     gene            complement(1522..2385)
                     /locus_tag="VKX24_05080"
     CDS             complement(1522..2385)
                     /locus_tag="VKX24_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HLJ07888.1"
                     /translation="MSQIERVGVVGCGLMGSGIAEVCARAGLDVVVREVNQGALDAGR
                     KRIESSLDRAVRSGKLPEAERAAAVGRLRYTTDFAEFADRQLVVEAVIENEAEKLEVF
                     RGIDKAVEADDAILATNTSSIPVMKLAMATNRPASVLGLHFFNPVPVMHLVELIPSLL
                     TAPETAAAAESFAAGVLDKRVIRSKDRAGFIVNALLIPYLLSAIRMLESGFATAEDID
                     SGVVEGLRHPMGPLALTDLIGLDTTIAVSQSLYEEFKEPLYAPPPLLSRMVEAGLLGR
                     KVGRGFYDYTR"
BASE COUNT          340 a          887 c          966 g          362 t
ORIGIN      
        1 acgccgccct ggccgccgcc ggccgggcga cctacgtgca ctgcaccgac gcccaggccc
       61 tggaagggtt caagctcctg tcggtgagcg aggggatcgt ccccgccctg gaaccggccc
      121 acgccctcgg ctggctggcg gaggcggcgg ggtcggagat tcccgccggg gcgacggtgc
      181 tggtgacgct gtcgggccgg ggcgacaagg acgcccacca ggtggccgat ctcctcggcg
      241 agccgctgga atgaacctgg agagacacct ccgggcccgg cgggaggagg gccggaagct
      301 gctcgtgccc tacgtgaccg gcgggctcgg ctcggcctgg ctcgacgtcg tgcgggcggt
      361 ggccgacgcc ggtgccgacg ccatcgagat cgggatcccg ttctccgacc cggtgatgga
      421 cgggcggatc atccaggagg cctcccgccg ggccatcgag atcggcgcca ccccggccgg
      481 gatcatcgcc gacctggcca aggtcgacgt cggcgtcccc accgtggtga tgacgtatta
      541 caaccccgtc cagcactacg gccacgagcg cttcgccgcc tcgctggccg ccagcgggat
      601 cgacggcgcc atcgtccccg acctgccgct cgacgagctg gtcgggtcgc cggcgggcga
      661 cggcgccgag gccgggtcgt gggccgacgc cgccgaccgc tccggggtgg aaacggtgct
      721 gctggcggcg ttgacgacgc ccgaggaccg cctcgccgcc atctgcggcc gcagtcgcgg
      781 gttcgtctac ggcgtctcgc tgctcggagt gacgggggag cgggccaagc tgtcggaggg
      841 ggcgctggag atgggccgcc gcctcaaggc cgccaccgac aagcccgtcc tcctcggcgt
      901 cggtctctcg acgccggaac aggccgtgga ggcgagctcg gcggccgacg gcgtgatcgt
      961 cggcagcgcc ctggtgcgcc ggctcctcga agggggcggc ccggaacagg ccggcgccct
     1021 cgtcgactcc ttccgccggg ccctcgacgc cgtctagcta gaggccggct cgccgccggc
     1081 cggcgtctcc ggggccggcg gcgctttcgg cttcggtgcc gccgtcttcg ggccccgctt
     1141 gatggtgttg cggctctcgg cgacgtagct gcggtagacg gccaggaggg cttcccgctg
     1201 gccgtcggtc aggtagggat cggcggagat ggccgcctcg gtggcgccgt ggacccggcc
     1261 ttcgtcgtcg ttgtcgccga cgaggccgac ctgggccagc agcgtctcgg tggagatgtc
     1321 gagggccctg gcgatggcct ggatgacccg gatcgacggc tcgtgcagcc cccgctcgat
     1381 ctggctgagg taggggttcg acacccgggc cagctcggcc agctcccgca gcgacagctt
     1441 ggccagctgc cgctgggtgc ggacaaagct gccgaaggcc tcgagctgcg ttctccaggg
     1501 gtcctcggcc acggtgcctt tctagcgcgt gtagtcgtag aagccccggc cgaccttgcg
     1561 gccgaggagg ccggcctcga ccatccggga caggagcggc ggcggagcgt agagcggctc
     1621 cttgaactcc tcgtagagcg actgcgacac ggcgatggtc gtgtcgaggc cgatcaggtc
     1681 ggtcagcgcc agcgggccca tcgggtggcg gaggccctcg acgacgccgg aatcgatgtc
     1741 ctcggcggtg gcgaagcccg attccagcat ccggatggcc gacagcaggt aggggatgag
     1801 cagggcgttg acgatgaagc cggcccggtc cttggagcgg atgacccgct tgtcgaggac
     1861 gccggcggcg aacgactcgg ccgccgccgc cgtctccggc gcggtgagca gcgaggggat
     1921 cagctccacg aggtgcatca cggggacggg gttgaagaag tgcaggccca gcaccgacgc
     1981 cggccggttg gtggccatgg ccagcttcat gaccgggatc gacgaggtgt tggtggcgag
     2041 gatggcgtcg tccgcctcga ccgccttgtc gatcccccgg aacacctcga gcttctcggc
     2101 ctcgttctcg atcacggcct cgacgacgag ctgccggtcg gcgaactcgg cgaagtcggt
     2161 cgtgtagcgc aggcggccga cggcggcggc gcgctcggcc tcgggcagct tgccggagcg
     2221 gacggcccgg tcgagcgagc tctcgatccg tttgcggccg gcgtcgaggg cgccctggtt
     2281 gacctcccgg acgacgacgt cgagcccggc ccgggcacag acctcggcga tcccggaacc
     2341 catgaggccg cagcccacca cgccgactcg ctcgatctgg ctcatgcgga cctcctcatc
     2401 actcggtcgc aacgaactgc ggatggacgc gccgctgccc ggcgagaatt ctctcgccgg
     2461 gcagggccca agaaccggcg gaagggggga ccgccggttc ccgtgatcga cagtgagcgg
     2521 atcaggccgc ggcgctggtc ttcgacgccg gcgtg
//
LOCUS       DATGJT010000297         2287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_351676, whole genome shotgun sequence.
ACCESSION   DATGJT010000297 DATGJT010000000
VERSION     DATGJT010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351676"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VKX24_05085"
     CDS             <1..316
                     /locus_tag="VKX24_05085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07889.1"
                     /translation="GTGTNGSRGSNGTPGRPGVEIVPGQSPALWLPGSDEMTSLVKNL
                     LGPNRACLDSCTGVDGKAGGDGTAGALATGADGADSSGPASGSNGADAVGGNGTAGAN
                     GS"
     gene            364..1389
                     /locus_tag="VKX24_05090"
     CDS             364..1389
                     /locus_tag="VKX24_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014742678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLJ07890.1"
                     /translation="MRTLGRTGVQVSSMCLGAMMFGGWGNPDHEESIRIIHRALDAGI
                     NFIDTADVYSGGESEEIVAKALIGGRRDQVVLATKAHFPMGDDPNRRGNSRRWLMQEV
                     DNSLRRLGTEWIDLYQIHRPDPDTDIDETLGALTDLVRTGKIRYFGSSTFPAHAIVEA
                     QWVAERRNRERFVSEQPPYSILVRGIEGDVLPVCQQHGIGVLTWSPLAGGWLSGKYRK
                     DEDLPSSTRAERLPQRYDLTLPANQRKLDAADRLGRLADEVGISLIHLALAFVLRHPG
                     VTSAIIGPRTMEQLEGQLGARDVVLDDDVLDRIDEIVPPGQNLNPADAGWQHPALSAP
                     ARRRRQP"
     gene            complement(1393..1647)
                     /locus_tag="VKX24_05095"
     CDS             complement(1393..1647)
                     /locus_tag="VKX24_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1416 domain-containing protein"
                     /protein_id="HLJ07891.1"
                     /translation="MQRADQPCPDRPVETTVRLLRGDGSVAATGKSAADGSFRLLAAP
                     GNYRLVADWPSGAGGCRPVDVTVERGRFTHADVGCDTGIR"
     gene            1667..2266
                     /locus_tag="VKX24_05100"
     CDS             1667..2266
                     /locus_tag="VKX24_05100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07892.1"
                     /translation="MTRPSAPDCSQGAKAPGAGPPAAAPPDAGSAQGGAQGPVSGAAD
                     GQGGGQASAASQGGGQAPVGGTGSARVVAGAGSAEGHGGGQEYGVAPLPGSAQGGGQA
                     ATAELVAALPAGVVGWTTPAQGGGQAIAAELVTAPLSPGGIGWAGSAHGGGHGAGRPS
                     AVAYIGHGCGHAGAVGPADAAPAPHGGGQAVAGVAPLPA"
BASE COUNT          306 a          808 c          906 g          267 t
ORIGIN      
        1 cgggacgggt acgaacgggt ctcggggctc caacggcact ccgggccggc ccggggtgga
       61 gattgtgccg ggccagagcc ctgccctgtg gctgcccggg agcgacgaga tgacgtcgtt
      121 ggtgaagaac ctgctcggcc ccaaccgggc ctgcctggac tcatgcacgg gagttgacgg
      181 caaggccggt ggggacggaa cggcgggggc cctggcgacg ggcgccgacg gagcggactc
      241 cagcgggccc gcctccggca gcaacggcgc cgacgccgtc ggtgggaacg gcacggcggg
      301 cgccaacggg agttagcccg tcgccgcttt cgccgcaccg gcggttgggt agggttcgcg
      361 gccatgcgga ctctcggtcg caccggcgtg caggtcagct cgatgtgcct cggagccatg
      421 atgttcggcg gctggggcaa cccggatcac gaggagtcga tccggatcat ccaccgggcg
      481 ctcgacgccg gcatcaactt catcgacacg gccgacgtct actcgggcgg ggaatccgag
      541 gagatcgtgg ccaaggccct gatcggtgga cgacgggacc aggtcgtgct ggcgaccaag
      601 gcccacttcc cgatgggcga cgaccccaac cgccggggca actcccgccg gtggctgatg
      661 caggaggtcg acaacagcct gcgcaggctc ggcaccgagt ggatcgacct gtaccagatc
      721 caccggcccg accccgatac cgacatcgac gagacgctgg gcgcgctgac cgacctcgtc
      781 cgaacgggca agatccggta cttcggctcg tcgacgttcc cggcccacgc catcgtcgag
      841 gcgcagtggg tggccgaacg gcgcaaccgg gagcggttcg tctccgagca gccgccgtac
      901 tcgatcctcg tgcggggcat cgagggcgac gtgctgccgg tgtgccagca gcacggcatc
      961 ggcgtcctca cctggagtcc gctggccggc gggtggctgt cggggaagta ccgcaaggac
     1021 gaggacctgc cgtcgagcac ccgggccgag cggcttccgc agcgctacga cctgaccctt
     1081 cccgccaacc agcgcaagct cgacgccgcc gaccggctcg gccggctggc cgacgaggtc
     1141 gggatttcat tgatccatct ggcgctggcc ttcgtgctcc ggcaccccgg cgtgacctcg
     1201 gcgatcatcg gcccccgcac gatggagcag ctcgaggggc agctcggcgc ccgggacgtc
     1261 gtcctcgacg acgacgtcct cgaccgcatc gacgaaatcg tgccgcccgg tcagaacctc
     1321 aacccggccg acgccgggtg gcaacacccg gcgctctcgg cgccggcgcg gcgccggcgg
     1381 cagccgtagg ggtcaccgga tgccggtgtc gcagccgacg tcggcgtggg tgaagcgacc
     1441 gcgttccacg gtgacgtcga ccggacggca cccgccggcc ccgctcggcc agtcggccac
     1501 gagccggtag ttccccgggg cggcgaggag gcggaagctg ccgtcggcgg ccgatttccc
     1561 ggtggcggcg acggagccgt cgccccggag aagacggacg gtcgtctcca ccggccggtc
     1621 ggggcagggc tggtcggccc gctgcaccgg gcaggtcggc ccggcggtga cccggccctc
     1681 cgctcccgac tgctcgcagg gggcgaaggc cccgggcgcc ggcccgccgg ccgccgctcc
     1741 gcccgatgcc ggctcggcgc aggggggagc gcaggggccg gtcagcgggg cggccgacgg
     1801 gcagggcggc gggcaggcgt ccgcggcctc gcagggggga gggcaggccc ccgtcggcgg
     1861 aaccggctcg gccagggtgg tggccggggc cggctccgcc gaggggcacg gcggggggca
     1921 ggagtacggc gtcgcaccgc tgcccggctc ggcgcagggc ggggggcagg cggcgacggc
     1981 ggagttggtt gcggcgctgc cggccggtgt cgtcggctgg acgacgccgg cgcagggcgg
     2041 tggacaggcg atcgcggccg agttggtcac agcgccgctg tcgcccggcg gcatcggctg
     2101 ggccggttcg gcgcacggcg ggggacacgg cgccggacgg ccgtcggccg ttgcgtacat
     2161 cggacacggc tgcgggcacg ccggagccgt cgggccggcc gacgccgcgc cggccccgca
     2221 cggcggagga caggccgtgg ccggcgttgc gccgttgccc gcctgaccac acggcggcgg
     2281 gcaggca
//
LOCUS       DATGJT010000298         2185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_144121, whole genome shotgun sequence.
ACCESSION   DATGJT010000298 DATGJT010000000
VERSION     DATGJT010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144121"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VKX24_05105"
     CDS             <1..291
                     /locus_tag="VKX24_05105"
                     /inference="COORDINATES: protein motif:HMM:NF025912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLJ07893.1"
                     /translation="ALARLLVDKGEAAQALELLARIPETAEARQVAAEARLADRQVAV
                     SADGVDSLLDALLPRVKDDEQARQEFLDLLETLPADDPRTGTYRKALASRLF"
     gene            292..1122
                     /gene="folP"
                     /locus_tag="VKX24_05110"
     CDS             292..1122
                     /gene="folP"
                     /locus_tag="VKX24_05110"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006334329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HLJ07894.1"
                     /translation="MHLVLGERSYDLSTRVLVMGILNRTPDSFYDKGATFGLDALLGR
                     AEQLVGEGADILDVGGVKAGPGPEVTEAEELDRVVPAIAALTDRFDVPVSVDTFNGSV
                     AEAAYGAGAVMGNDISGFADPRYLPAAAAAGAAVVATHIRVAPRVPDPDPHYDDVVAE
                     VASFLADLARRALDAGIPADKIVLDAGLDLGKTAVQSLDLLRASARLADMGHPLLLSA
                     SNKTFLGKVLDLEIDERAEASLSALSLGAALGCRIVRVHDVEAARQACDVVTAILEAG
                     "
     gene            1128..2165
                     /gene="holA"
                     /locus_tag="VKX24_05115"
     CDS             1128..2165
                     /gene="holA"
                     /locus_tag="VKX24_05115"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HLJ07895.1"
                     /translation="MPVRTPAPAVLVRGDEPALVSQAVSDVLSEVLEGRDPATAVEEH
                     GAAGLDIDVDSVIDALTTPPFLVDRRVVVVREAGRLVAADGARIAAWLGEPVDGVVLV
                     LAAGGGTVPAALAGAVKNKGRVVDSDPGRGRARGQWLTEQLRAAPVRLDARAAATLGD
                     HLGQDLGRLRSLVDSLAAAYGEGAAVDEDRLSPFLGEAGSVAPWDLTDAVDAGDAAGA
                     LEALRRLLGPGAVHPLAVMGILHRHVQAMLRLDGSSVSTAEEAAELLGMRSAYPARKA
                     LEQGRRLGSARIGRAVTLLADADLDLRGRTGLDDRTVLEVLVARLARLSGSGTPRRGR
                     APARAGGGRRR"
BASE COUNT          270 a          808 c          801 g          306 t
ORIGIN      
        1 gcgctggccc ggctgctcgt cgacaagggg gaggcggccc aggcgctcga gctcctggct
       61 cgcatccccg aaaccgccga ggcgcgccag gtggcggccg aggcccgtct ggccgaccgg
      121 caggtggcgg tgtcggccga cggcgtcgac agcctgctcg acgcgctgct gccgcgggtc
      181 aaagacgacg agcaagcccg tcaggagttc ctcgacctgc tcgagaccct tcccgccgac
      241 gatccccgca ccggcaccta ccgcaaggcg ctcgcctccc gactcttcta gatgcacctc
      301 gtcctcggcg agcgcagcta cgacctgtcc acgagggtgc tggtgatggg gatcctcaat
      361 cgcacccccg actcgttcta cgacaagggg gccaccttcg gcctcgacgc cttgctgggt
      421 cgcgccgagc agctcgtggg cgagggcgcc gacatcctcg acgtgggcgg ggtgaaggcg
      481 ggccccgggc ccgaggtgac cgaggccgag gagctcgacc gtgtcgtgcc cgccatcgca
      541 gcgctcacgg atcgtttcga cgtcccggtg tccgtcgaca ccttcaacgg gtcggtggcc
      601 gaggcggcct acggagcggg cgccgtcatg ggcaacgaca tcagcggctt cgccgatccc
      661 cgctacctgc ccgcggcggc agcggcgggg gcggcggtgg tggcgacgca catccgagtt
      721 gcgccgcggg tccccgatcc cgacccgcac tacgacgacg tggtggcgga ggtcgcctcg
      781 ttcctcgccg acctggcgcg ccgcgctctc gacgccggga tccctgccga caagatcgtc
      841 ctcgacgccg ggctggacct cggcaagacg gcagtgcagt cgctcgatct cctgcgcgcc
      901 tcggctcggc tggccgacat gggtcatccg ctgctgctct cggcctccaa caagaccttc
      961 ctgggcaagg tgctcgacct cgagatcgac gagcgtgccg aggcttcgct ctccgcgctg
     1021 tcgctcgggg ccgcgctcgg ttgccgcatc gtccgcgtcc acgacgtcga agccgcccgg
     1081 caggcctgcg acgtcgtcac ggccatcctc gaggccggct gaccgccatg cccgttcgca
     1141 cccccgcccc ggccgtgctc gtccgtggcg acgagccggc gctcgtgagc caggcggtgt
     1201 cggacgtgct ctccgaggtg ctcgaagggc gtgaccccgc cacggcggtg gaggagcacg
     1261 gcgccgctgg actggacatc gacgtcgaca gcgtgatcga cgccctgacg acgcccccct
     1321 tcctggtcga ccgcagggtg gtggtggtgc gtgaggccgg ccgcctcgtg gccgccgacg
     1381 gggcacggat cgccgcttgg ctcggggaac cggtggacgg cgtcgtcctg gtgctcgccg
     1441 ccggcggggg caccgtcccc gccgcgctgg cgggcgccgt aaagaacaag gggagggtgg
     1501 tcgacagcga tcccgggcgc ggtcgggcgc gggggcagtg gctcaccgag caattgcgtg
     1561 ccgcgccggt gcgactggac gcccgcgccg ccgccacctt gggcgaccac ctgggacagg
     1621 acctggggcg gcttcgaagc ctcgtcgact cgctcgccgc cgcctacggc gagggagcgg
     1681 cagtcgacga agaccgcctc tccccgttcc tgggggaggc cggctcggtc gccccgtggg
     1741 acctgaccga cgcggtggac gccggggacg ccgccggtgc cctcgaagcc ttgcggcgac
     1801 tgctcggacc gggggccgta cacccgctcg ccgtcatggg catcctccac cgccacgtgc
     1861 aggcgatgct ccgtctcgac ggctcgtcgg tgtccacggc cgaggaggcg gccgagctgc
     1921 tcgggatgcg ctcggcgtac ccggcccgca aggcgctcga gcagggccgg aggctcgggt
     1981 ctgctcggat cggtcgtgcc gtcacgctgc tggccgacgc cgatctcgac ctgcgcgggc
     2041 gcaccggtct cgacgaccgg acggtgctcg aagtcttggt ggcgcgcctg gcgcggctct
     2101 ccggcagcgg gacgccacgg cgaggtcgtg caccggcacg cgccggcggg ggccgccgcc
     2161 gctgattcgc cccctcagct gggaa
//
LOCUS       DATGJT010000299         2228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1388829, whole genome shotgun sequence.
ACCESSION   DATGJT010000299 DATGJT010000000
VERSION     DATGJT010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388829"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VKX24_05120"
     CDS             <1..218
                     /locus_tag="VKX24_05120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012635110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="uL13 family ribosomal protein"
                     /protein_id="HLJ07896.1"
                     /translation="PGGLRSIGYDKLLAERPDVAVEKAVRGMLPHNRLGRAQARKLKV
                     YTGPEHPHAAQRPQPLAIHGPRRSTWQ"
     gene            209..607
                     /gene="rpsI"
                     /locus_tag="VKX24_05125"
     CDS             209..607
                     /gene="rpsI"
                     /locus_tag="VKX24_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008635956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HLJ07897.1"
                     /translation="MAVAELSRATGRRKEAVARVRLLPGTGVFVINKSRSLEDYFPNL
                     AVRMTILEPFKVAGREKAYDVYALLEGGGNTGQAGAIRHGIARALVELDPELRTPLKR
                     AGMLTRDARAKERRKYGLKKARKAPQYSKR"
     gene            631..1992
                     /gene="glmM"
                     /locus_tag="VKX24_05130"
     CDS             631..1992
                     /gene="glmM"
                     /locus_tag="VKX24_05130"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018682784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HLJ07898.1"
                     /translation="MPRLFGTDGVRGIANLELTPALALDLGRAAATAFRSQHTRPAVL
                     IVRDTRRSGDLLGAALSAGLMSAGSDVLECGVLPTPAAAFLATDLHTDAGAVVSASHN
                     PADHNGIKFFGPDGFKLTDEQESRIEALLGGSGATDLAPPVVGAAVGKISVLGDAEDR
                     YVAHALRSLEGRRLDGLKIVVDCANGAAYRTSPRALAEAGAEVVAINDEPDGMNINVG
                     CGSTDLRPVSEAVVACGADLGLAHDGDADRVLAVDANGVLVDGDAIIAILARELKEKD
                     RLPGDLVVTTVMANLGFRVAMTAAGIDLIETAVGDRYVIEAMRRHGVEIGGEQSGHVI
                     LADCSTTGDGLITGLRLAGRVVSTGRPLSELATVVERFPQVLVNVPVRDRDALRDAAS
                     VWKAVEGAEASLGQLGRVLVRPSGTEAVVRVMVEAADQALADEAAASIVAAVLADLGP
                     PDE"
BASE COUNT          321 a          816 c          796 g          295 t
ORIGIN      
        1 acccgggcgg cctccgatcg atcggctacg acaagctgct cgccgagcgg ccggacgtgg
       61 cggtcgagaa ggcggtgcgc ggcatgctgc cgcacaaccg gctcggccgg gcacaggccc
      121 gcaagctcaa ggtctacacc ggcccggagc acccgcatgc cgcccagcgg ccccaaccac
      181 tggccatcca cgggcccagg aggtcgacat ggcagtagcc gagctgtccc gggccacggg
      241 ccgccgcaag gaagccgtcg cccgcgtccg gctgctcccg ggcaccggcg tgttcgtcat
      301 caacaagtcc cgctcgctgg aggactactt cccgaacctg gcggtgcgca tgacgatcct
      361 ggagccgttc aaggtcgccg gccgggagaa ggcctacgac gtctacgcgc tcctcgaggg
      421 cggcggcaac accggccagg ccggcgccat ccgccacggc atcgcccggg cgctggtgga
      481 gctcgacccg gagctgcgca ccccgctgaa gcgggcgggc atgctgaccc gggacgcccg
      541 ggccaaggag cggcgcaagt acggactgaa gaaggcccgc aaggctcctc agtactccaa
      601 gcgctagccg ccgcttctcg tcccgacgac gtgcctcgac tcttcggcac cgacggggtc
      661 cgtgggatcg ccaacctcga gctgacccct gccctcgcgc tcgatctcgg ccgggcggcg
      721 gccactgcct tccgcagcca gcacacccgg ccggcggtgc tgattgtccg tgacacccgg
      781 cgctccggcg acctgctcgg cgcggcgctg tcggccgggc tgatgtcggc gggctcggac
      841 gtgctcgaat gcggcgtcct cccgacaccc gccgccgcct tcctggcgac cgacctgcac
      901 accgacgccg gcgcggtcgt ctccgcctcg cacaacccgg ccgaccacaa cggcatcaag
      961 ttcttcggtc ccgacgggtt caagctgacc gacgagcagg agtcccgtat cgaggcgctg
     1021 ctcggcggca gcggcgccac cgacctggcc ccgccggtcg tcggggcggc ggtcggcaag
     1081 atctcggtgc tgggtgacgc cgaggaccgc tacgtcgccc acgccctgcg ctcgctcgag
     1141 ggccgccggc tcgacggcct caagatcgtc gtcgactgcg ccaacggggc cgcctaccgg
     1201 accagccctc gggcgctagc ggaagcgggg gccgaggtgg tcgccatcaa cgacgagccc
     1261 gacggcatga acatcaacgt cggctgcggg tcgaccgacc tgcgcccggt ctccgaggcg
     1321 gtggtcgcct gcggcgccga tctcggtctg gcccacgacg gcgacgccga ccgggtgctg
     1381 gccgtcgacg ccaacggggt cctggtcgac ggcgacgcga tcatcgccat cctcgcccgg
     1441 gagctcaagg agaaggaccg gctgccgggc gacctcgtcg tcacgacggt gatggccaac
     1501 ctcggcttcc gggtggcgat gaccgccgcc ggcatcgacc tgatcgagac cgccgtcggc
     1561 gaccgctacg tcatcgaggc gatgcgccgg cacggggtcg agatcggcgg cgagcagtcc
     1621 ggccacgtga tcctggccga ttgctcgacg accggggacg ggctgatcac cgggctgcgc
     1681 ctggcggggc gggtcgtgtc gaccggccga ccgctctccg agctggcgac ggtcgtcgaa
     1741 cgcttcccgc aggtgctggt caacgtcccg gtgcgcgacc gggacgccct gcgcgacgcc
     1801 gcctcggtct ggaaggcggt cgagggggcc gaggcgtcgc tcggccagct cggccgggtc
     1861 ctggtccggc cctcggggac cgaggcggtg gtgcgggtga tggtcgaggc cgccgaccag
     1921 gcgctcgctg acgaggccgc cgcctcgatc gtcgccgccg ttctggccga tctcggccct
     1981 cccgatgagt gaaagctcac cgggctgcag tgggccgcga tccggcccat acttgagtaa
     2041 cgagcggcca gcggaaaggg gggcttagcg agcaaccttc gccatcgaac catcgtccac
     2101 ggcggattgg cagtcgtttc accaacagcg cctggactcg gcggccccgg tgcacggggc
     2161 tggcgagttg acgaggagag ggatctcgaa acattcggcg ggtgacctcc ggccggccac
     2221 ggtcgtga
//
LOCUS       DATGJT010000300         2760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_144610, whole genome shotgun sequence.
ACCESSION   DATGJT010000300 DATGJT010000000
VERSION     DATGJT010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144610"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VKX24_05135"
     CDS             complement(<1..645)
                     /locus_tag="VKX24_05135"
                     /inference="COORDINATES: protein motif:HMM:NF028519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdrD B-like domain-containing protein"
                     /protein_id="HLJ07899.1"
                     /translation="MRKTHRVAAILAIVAALSTGLAGPASATLSGTISGTVFQDGNRN
                     GVQDAGEPGWQGHQLYLFDSGGTYLGTTTSDASGSYAFSGLADGDYRVQYASPSWWPL
                     RQGWVPTTTGSIFPSLSLHLAGSATANFGWRPIARSTTLGSPITFYVGGNGLRVESYN
                     DAVAPKSLYDTLMAGALVGPEASSVVVRLDYGSSSVTSTSVAQTNGVYSGYSAAS"
     regulatory      complement(727..801)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            complement(1020..1289)
                     /locus_tag="VKX24_05140"
     CDS             complement(1020..1289)
                     /locus_tag="VKX24_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07900.1"
                     /translation="MAELLFEEHADAALSALESDPARARLLERINEVLDLLEADPGDR
                     RVRRRRYHTVECWGVPMTGDGEEWLLLWDFQAEGVIAIRYLGPDL"
     gene            complement(1282..1521)
                     /locus_tag="VKX24_05145"
     CDS             complement(1282..1521)
                     /locus_tag="VKX24_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07901.1"
                     /translation="MDELLELDDRRRVSLGKIGKPEHRRYLVTEEPDGTIILTPAAVV
                     SEHELRLLAHPEVVARIEASRQDPTKLVKHRRRRG"
     gene            complement(1571..2290)
                     /locus_tag="VKX24_05150"
     CDS             complement(1571..2290)
                     /locus_tag="VKX24_05150"
                     /inference="COORDINATES: protein motif:HMM:NF016163.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF429 domain-containing protein"
                     /protein_id="HLJ07902.1"
                     /translation="MPFSEARLKRGAPVPYRLLAGVEPCGRGWLVVSGKLQGVSLFPE
                     PPQLLATIVEILDYRPSFEIVALHAPIGLPSGLHPGGRASDREARRLLGPRRGAAIVS
                     PPPRSVLDDEDGAGLSAVVRTLLPRIREVQRDVASYHQRTVFEVHPELGFHQLNGDAP
                     LRRGKRTRAGIEERLALLQARMPGLDRVLDHRPESVPLPRLLDACVDLWTARRIAARD
                     LARLPENPEWNEDGLRMELVR"
     gene            complement(2296..>2760)
                     /locus_tag="VKX24_05155"
     CDS             complement(2296..>2760)
                     /locus_tag="VKX24_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020391200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLJ07903.1"
                     /translation="EMRDLESVDTVLTMAETGHLVFATVHTNDTSQAVDRVIGVFPGD
                     TQNQARLQLSASLVGVIYQRLIPRIGGGLVAAYEILAGTSAVRNLIREANNRQLRNAI
                     TMGQGEGMQTLEMHLSRLVTDGIVDRDEAVLRSLYPKEIAQPAPPPKMAMAR"
BASE COUNT          413 a          902 c         1027 g          418 t
ORIGIN      
        1 gctcgccgcc gagtagcccg aatacactcc gttcgtctgg gccaccgacg tcgaggtgac
       61 gctgctcgag ccgtaatcca accggactac gacactcgac gcttcgggcc ccacgagggc
      121 accggccatc aacgtgtcgt agagcgactt gggcgccacg gcgtcgttgt agctctccac
      181 gcgcaggccg ttgccgccga cgtagaacgt gatcggcgac ccgagggtcg tggaccgcgc
      241 gatcggccgc cacccgaagt tcgccgtcgc cgagcctgcc agatgaagcg agagactggg
      301 aaagatcgaa cccgtagtgg tcggcaccca gccttgacgg agaggccacc aggacggtga
      361 ggcgtactgg acccggtagt cgccgtcggc cagccccgag aacgcatagc tgccgctggc
      421 gtccgaggtc gtcgtcccca gatacgtacc gccagaatcg aagaggtaca gctggtggcc
      481 ctgccagccg ggctcgccgg cgtcctggac gccgttgcgg ttcccgtcct ggaagacggt
      541 cccggagatg gtgccggaga gggtggccga ggccgggccg gccaggcccg tcgagagggc
      601 ggcgacgatc gccaggatcg ctgcaacccg gtgggtcttc cgcatgggag ctttctccgc
      661 ttcttccgcc gggccgtagg gcgcgtcgaa tgaccgcaag gaatcgaagg gagatcgaag
      721 accttgttcg gcaactcggc cgcccggtct gggcccgaag ctttgcgtcc ccgtcttccg
      781 gcgggtttgc ccgttcgctc aggtgcgttc agccatacct acggcgcggg agatggatcg
      841 cttgaatcag tggacatttg cgatgagggc cttatggggt accaggtagg acgtcccggg
      901 gcacttgccc caggcccgaa cccacagttc cacggctggg gggcgccggc tccatccgag
      961 cgcgccgact cgcgtcccgg ccctcgcttc gcagagcccg cgagcttcat ccagcgagct
     1021 cagagatcgg ggccgaggta gcggatggcg atcacccctt cggcctggaa gtcccagagg
     1081 aggagccact cctcgccgtc gccggtcatc gggacgcccc agcattcgac ggtgtgatag
     1141 cggcgccgac gaacccgccg gtcgcccggg tcggcctcga gaaggtcgag aacctcgttg
     1201 atgcgctcca gaaggcgggc ccgggcgggg tcggactcga gggcggagag ggctgcgtcg
     1261 gcgtgctcct cgaagaggag ttcagccacg acggcggcgg tgtttcacca gcttggtggg
     1321 atcctggcgg gaagcctcga tccgggcgac cacctcgggg tgggcgagca gccgtagttc
     1381 atgctcggac acgacggcgg ctggggtgag gatgatggtc ccatccggtt cctcagtcac
     1441 gaggtaccgg cgatgctccg gctttccgat cttgcccagg ctcactcgcc gacggtcgtc
     1501 cagctccagc aactcgtcca tcgccccatg ataccacttt gccccaatgc ccagagtggg
     1561 cggccgtggc ttagcgcacc agctccatgc gtagcccgtc ctcgttccac tccgggttct
     1621 cggggaggcg ggcgaggtcc cgggcggcga tgcgccgggc ggtccacagg tcgacgcagg
     1681 cgtcgaggag gcggggcagg ggaacgctct cgggccggtg gtcgaggacc cggtcgaggc
     1741 ccggcatccg ggcctggagc agcgccaggc gctcctcgat cccggccctg gtgcgtttcc
     1801 cccgccgcag cggcgcatcg ccgttgagct ggtggaagcc gagctcgggg tggacctcga
     1861 agacggtgcg ctggtggtag gaggcgacgt cgcgctggac ctcgcggatg cggggcagca
     1921 gcgtgcgtac caccgcgctg aggccggcgc cgtcctcgtc gtcgagcacc gaacgcggcg
     1981 gcggcgagac gatggccgcg ccccggcggg ggccgagcag gcggcgggcc tcgcggtcgg
     2041 aggcccggcc gccggggtgg aggccgctgg gcaggccgat gggggcgtgg agggccacga
     2101 tctcgaagga ggggcggtag tcgaggatct cgacgatcgt ggccagcagt tggggaggtt
     2161 cggggaagag ggacaccccc tgcagcttcc ccgacaccac cagccagcct ctcccgcagg
     2221 gctcgacacc ggccaggagg cggtagggga caggcgcgcc ccgcttcagc cgtgcttcgg
     2281 agaagggcac gggccctacc gggccatcgc catcttcggc gggggagcgg gctgggcgat
     2341 ctccttgggg tacagactcc gcaggacggc ctcgtcgcgg tcgacgatgc cgtcggtcac
     2401 gaggcgggag aggtgcatct ccagcgtctg catgccttcg ccctgaccca tggtgatggc
     2461 gttgcggagc tggcggttgt tggcctcccg gatcaggttc cgcaccgcgc tggtgccggc
     2521 caggatctcg taggcggcga cgaggccgcc gccgatgcgg gggatgagcc gctggtagat
     2581 cacgccgacc aggctggccg acagctgcag ccgggcctgg ttctgggtgt cgccggggaa
     2641 cacgccgatg acccggtcga cggcctggga ggtgtcgttg gtgtgcacgg tggcaaagac
     2701 gaggtggccc gtctcggcca tggtgaggac ggtgtcgacc gactccaggt cgcgcatctc
//
LOCUS       DATGJT010000301         2977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_247927, whole genome shotgun sequence.
ACCESSION   DATGJT010000301 DATGJT010000000
VERSION     DATGJT010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247927"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2028
                     /gene="mfd"
                     /locus_tag="VKX24_05160"
     CDS             <1..2028
                     /gene="mfd"
                     /locus_tag="VKX24_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HLJ07904.1"
                     /translation="QTEGFFDDLKPGDYVVHHQHGVARYAGMVKRAVGGAERDYLLLE
                     YRGADKLYVPSDQVDAVRPYTGGESPSLHRLGGGDWEKAKARVRKAVREIAQELVVLY
                     RRRVTTPGHAFPPDTPWQREMEDAFPYTETPDQAKAIVEVKEDMESEHPMDRLICGDV
                     GFGKTEVAIRAVFKAVQDGRQAAILVPTTLLAQQHSQTFTERFAGYPVRVEVLSRFLT
                     ASQARKVVDGLADGTVDVVIGTHKLLGGDVRFKDLGLLVVDEEQRFGVTHKEAIKQLR
                     ANVDVVTLTATPIPRTLEMSLTGIRDLTLLNTPPADRQPILTYVGEYDERAVAEAIRR
                     ELLREGQVFFVHNRVQDIEHVTRRLRELVPEARIAVAHGQMDEGSLERVVLDFWDGQY
                     DVLVCTTIIESGIDMPTVNTLVVDRADRLGLGQLHQLRGRVGRAGQRAYAYLFFPPDR
                     ELTEEAYERLKTIGEHTELGSGFKIAMRDLEIRGAGNLLGADQSGHIAAVGYDLYVQM
                     VSEAVAELKGEEVREPAEIKLELPLDAFLPVDYVSREDLRIEAYRRLAVVTNHAEVDD
                     IAAEWADRYGPPPPPAEALLRVARLRAECARLGIREVAVARGVARISPLQLKTSQSVR
                     LGRRFPKAVYKEDIAQLVLPLTLSGTSRVDPAEFLVAVLQELVPPELAASA"
     gene            2276..>2977
                     /locus_tag="VKX24_05165"
     CDS             2276..>2977
                     /locus_tag="VKX24_05165"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLJ07905.1"
                     /translation="MKTRRLALAVVVAAGGGLLAACTGTAPYSAIVNGTRLSQATLSR
                     ELHSLGGNAAFVSSYDQSITQSGSSQQPVFAADTGGRTYTQGFTAVVLNTDIQAQLIH
                     DEVVRRHIQPSAADINNSATTAAQQFPTDPQTNKSVFDSFDGWFKHEYEVRAAEQAAL
                     QKALPAVATDTAAVKKFYADNPADFITTECVSHILVATEQKATELRDRLAGGADFATL
                     AAQNSTDTASAVKGGA"
BASE COUNT          456 a         1088 c         1054 g          379 t
ORIGIN      
        1 cagaccgagg ggttcttcga cgacctcaag ccgggtgact acgtcgtgca ccaccagcac
       61 ggggtcgccc gctacgcggg gatggtcaag cgcgccgtcg gcggcgccga acgcgactac
      121 ctgctcctcg agtaccgggg cgcggacaag ctgtacgtcc cgagcgacca ggtcgacgcg
      181 gtgcgcccgt acaccggggg cgagagcccg tcgctgcacc gcctgggcgg gggcgactgg
      241 gagaaggcca aggcccgggt gcgcaaggcg gtgcgggaga tcgcccagga gctggtcgtg
      301 ctctaccggc gccgggtgac gacgcccggg cacgccttcc cgcccgacac cccgtggcag
      361 cgggagatgg aggacgcctt cccctacacc gagacgcccg accaggccaa ggccatcgtc
      421 gaggtcaagg aggacatgga gtcggagcac cccatggacc gccttatctg cggcgacgtc
      481 gggttcggga agacggaggt ggccatccgg gccgtgttca aggcggtgca ggacggccgg
      541 caggcggcga tcctggtgcc gacgaccctc ctcgcccagc agcactcgca gaccttcacc
      601 gagcgcttcg ccgggtaccc ggtgcgggtc gaggtgctga gccgcttcct caccgcttcc
      661 caggcccgca aggtcgtcga cggcctcgcc gacgggacgg tcgacgtggt catcggcacc
      721 cacaagctgt tgggcgggga cgtccggttc aaggacctgg ggctgctggt ggtcgacgag
      781 gagcagcggt tcggggtcac ccacaaggag gcgatcaagc agctgcgggc caatgtcgac
      841 gtggtgacgc tgacggcgac gcccatcccc cgcacgctgg agatgagcct cacagggatc
      901 cgcgacctga cgctgctcaa cacccccccg gcggaccggc agcccatcct cacctacgtc
      961 ggcgagtacg acgagcgggc ggtggcggag gcgatccgcc gggagctgct ccgggagggg
     1021 caggtcttct tcgtgcacaa ccgggtgcag gacatcgagc acgtgacccg tcggctgcgg
     1081 gagctggtgc ccgaggcgcg catcgccgtc gcccacgggc agatggacga gggctcgctc
     1141 gaacgggtgg tgctcgactt ctgggacggc cagtacgacg tcctggtgtg caccacgatc
     1201 atcgagtcgg gcatcgacat gcccaccgtc aacaccctgg tggtggaccg ggccgaccgg
     1261 ctcggcctcg ggcagctcca ccagctgcgg ggccgcgtcg ggcgggcggg gcagcgggcg
     1321 tacgcctacc tgttcttccc tcccgaccgg gagctcaccg aggaggcgta cgagcgcctc
     1381 aagaccatcg gcgagcacac cgagctgggg tccggcttca agatcgccat gcgcgacctg
     1441 gagatccggg gcgccggcaa cctgctcggc gccgaccaga gcggacacat cgcggccgtc
     1501 ggttacgacc tgtacgtgca gatggtcagc gaggcggtcg ccgagctgaa gggggaggag
     1561 gtgcgggagc cggcggagat caagctggag ctgcccctcg acgcgttcct tcccgtcgac
     1621 tacgtcagcc gggaggacct gcgcatcgag gcctaccggc gcctcgccgt cgtcaccaac
     1681 cacgccgagg tggacgacat cgccgccgag tgggcggacc gttacgggcc cccgcccccg
     1741 ccggcggagg cgctgctccg ggtcgcccgg ctgcgggccg agtgcgcccg cctgggcatc
     1801 cgggaggtcg ccgtcgcccg gggcgtggcc cgcatcagcc ccctccagct caagaccagc
     1861 cagagcgtgc gcctcggcag gcggttcccg aaggcggtct acaaggagga catcgcccag
     1921 ctggtgctcc ccctgaccct gtcagggacg tcccgggtcg atccggccga gttcctggtc
     1981 gccgtgctgc aggagctggt ccccccggag ctcgccgcga gcgcgtgatc cgggctgcga
     2041 gtcacaacct cgcggtggcg ggcgcctcgg gcgcgacctc gcgccattcc cgccggcgtt
     2101 cgggcgcgac atcgcgccag ccgggccgcg gagcgcgacc tcgcgccatc gcccggtccc
     2161 gccggccgag cccatggctt cactggagcc cgtgcggtgc cgcgacgccc ggcgatgccg
     2221 gcgtcctgcc ggccgatgcg gggacggcgc ggggctccac tacgctccca acgccgtgaa
     2281 gacccgtcgc ctcgcgctgg ccgtcgtcgt cgctgccggc ggcggcctgc tggcggcgtg
     2341 caccgggacg gcgccctact ccgccatcgt caacggcacc cgcctcagcc aggcgaccct
     2401 ctcccgggag ctgcactccc tcggcggcaa cgccgcgttc gtgtcgagct acgaccagag
     2461 catcacccag tcggggtcca gccagcagcc ggtgttcgca gccgacaccg gcggccgcac
     2521 ctacacccag ggcttcaccg ccgtcgtcct caacaccgac atccaggccc agctcatcca
     2581 cgacgaggtg gtgcgccgcc acatccagcc gtcggctgcg gacatcaaca actccgccac
     2641 caccgccgcc cagcagttcc cgaccgaccc gcagaccaac aagtcggtgt tcgacagctt
     2701 cgacgggtgg ttcaagcacg agtacgaggt gcgggccgcc gagcaggccg ccctgcagaa
     2761 ggcgctgccc gcggtggcga ccgacaccgc cgccgtcaag aagttctacg ccgacaaccc
     2821 ggcggacttc atcacgaccg agtgcgtgtc ccacatcctg gtcgccaccg agcagaaggc
     2881 gacggagctg cgggaccgcc tggcgggcgg ggccgacttc gccaccctgg ccgcccagaa
     2941 ctccaccgac acggcgagcg cggtgaaggg gggagcg
//
LOCUS       DATGJT010000302         2498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1490705, whole genome shotgun sequence.
ACCESSION   DATGJT010000302 DATGJT010000000
VERSION     DATGJT010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2498
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490705"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VKX24_05170"
     CDS             complement(<1..204)
                     /locus_tag="VKX24_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012869883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HLJ07906.1"
                     /translation="MTRVVHYLNQFFVGIGGEDSAGAAPGRADGPVGPGRRLAALLGE
                     GFEIVATVWCGDDYAAGGEDRATA"
     gene            complement(201..1508)
                     /locus_tag="VKX24_05175"
     CDS             complement(201..1508)
                     /locus_tag="VKX24_05175"
                     /inference="COORDINATES: protein motif:HMM:NF020896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase component B
                     subunit"
                     /protein_id="HLJ07907.1"
                     /translation="MVEQRRRNPGGAPSLRRLVHHVRDVRFGEATRLSAGVLTVARAE
                     AEAPFSHPALAGVRLSWASPGESVRIVKVLDAVEPRTKGPGGGGVFPGFVGRATPQGR
                     GDTHVLRGAAVVTAGYLPRAQEGLVDLSGPAAPLSPLGALHNLVVEFTPAPDADWEDV
                     DRGLRLGLLRLAVLLADAAAGVAPDAVEDVPGGGGGRRAARLPRIAAVTNLQTQGAFK
                     DVFVYGRRFADALATLVEPGELDDGAVVSGQFGHPGLKNPTYLHQNHPVVEALRERHG
                     SDLILAGVVLSPEPVDLAAKELVSAHAARLCAAAGIDAAVVTKEGGGNADADMALKMD
                     ALEDAGICAVGLFAEMAGPAGTAPPVVVPPERATAMVSTGNYDERLRLPAVERALGGA
                     RFDLLDVDATAALDVPTAIVYGALSPLGWGRLTCRPLDESSVA"
     gene            complement(1650..>2498)
                     /locus_tag="VKX24_05180"
     CDS             complement(1650..>2498)
                     /locus_tag="VKX24_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLJ07908.1"
                     /translation="FGDIVKVTPTSKVVGDLALYMVANDLTPAEVADPGREIAFPESV
                     VEFFHGDLGQPAGGFPEALQRKVLKGREPLTVRPGAVLPDADLAAARHEAETRIGRQV
                     SDDELASYLMYPKVFTDFAEHRRTFGDVSVLPTPAFFYGVDPDEELAVHIDRGKTLII
                     RCLAVGDPDGEGRRVVFFELNGQPRQAVVRDRALGPAAAARRRAEAGNPAHVAAPMPG
                     MVVGLQVVTGQPVERGDRLLSIEAMKMETAIFAEAAGMVDEVVVSAGTQVEAQDLLVV
                     LAPHPG"
BASE COUNT          313 a          942 c          942 g          301 t
ORIGIN      
        1 cgccgttgcc cggtcctcgc cgccggcggc gtagtcgtcg ccgcaccaca ccgtggccac
       61 gatctcgaac ccctcgccga gcagggcggc caggcggcgg cccgggccga ccggcccgtc
      121 ggcccggccg ggcgccgcgc cggcggagtc ctcaccgccg atcccgacga agaactggtt
      181 gaggtagtgc accacccggg tcatgcgacg ctgctttcgt cgaggggccg gcaggtgagg
      241 cgcccccagc cgagagggct gagcgcgccg tagacgatgg cggtcggcac gtcgagggcg
      301 gcggtggcgt cgacgtcgag caggtcgaag cgcgctccgc cgagcgcccg ctccaccgcg
      361 gggagccgga gccgctcgtc gtagtttccg gtgctgacca tggccgtcgc ccgctcgggc
      421 ggtaccacca ccggcggggc ggtgccggcc gggccggcca tctcggcgaa caggccgacg
      481 gcgcagatcc cggcgtcctc cagggcgtcc atcttgagcg ccatgtcggc gtcggcgttc
      541 ccgccgcctt ccttggtgac gacggcggcg tcgatgccgg cggcggcgca gagccgggcg
      601 gcgtgggcgg agacgagctc cttggccgcc aggtcgaccg gctcggggga gagcaccacc
      661 ccggccagga tcaggtcgga tccgtggcgt tcccgcagtg cttccaccac cgggtggttc
      721 tgatgcaggt aggtcgggtt cttcaggccg gggtggccga actggccgct caccaccgcg
      781 ccgtcgtcga gctcgcccgg ctccaccagc gtcgccagcg catcggcgaa gcggcggccg
      841 tagacgaaga cgtccttgaa ggcgccctgg gtctgcaggt tggtgacggc ggcgatgcgg
      901 ggcaggcggg cggcgcgcct accgcccccg ccgccgggca cgtcctccac ggcgtcgggc
      961 gccacgccgg cggcggcgtc ggcgaggagc accgccaggc gcagcaggcc gaggcgcagc
     1021 ccccggtcga cgtcctccca gtcggcgtcg ggggcggggg tgaactcgac gacgaggttg
     1081 tggagcgcgc cgagcggtga gagcggggcc gccggccccg acaggtccac cagcccttcc
     1141 tgggcccggg gcaggtagcc ggccgtcacc accgccgccc cccgcaggac gtgggtgtcg
     1201 ccccggccct gcggggtcgc ccgtccgacg aagccgggaa acacgccacc gccgccgggg
     1261 cccttggtgc ggggctccac cgcgtcgagg accttgacga tgcggacgga ctcccccggc
     1321 gacgcccacg acagccgcac gccggccagc gccgggtggg agaagggcgc ctcggcttcg
     1381 gcccgggcga cggtcagcac cccggccgac aagcgcgtcg cctcgccgaa gcggacgtcg
     1441 cgcacgtggt ggacgaggcg ccgcaggctc ggtgcgccgc ccgggttccg ccggcgttgc
     1501 tccaccactc gatctcctcg gaggccatgg gccatcggcg tggcggaccg gccggcggcc
     1561 gggcggccac gccgacgtcg accgtaggca acgccgcccc tccggcgggt cccccgcccg
     1621 agggaccgga ggacgggatc cggcgtcccc tacccggggt gcggggccag caccacgagg
     1681 aggtcctggg cctcgacctg cgtcccggcg ctgaccacca cctcgtcgac catcccggcc
     1741 gcctcggcga agatcgccgt ctccatcttc atcgcctcga tggacaggag gcggtcgccc
     1801 cgctccaccg gctgcccggt cacgacctgg aggccgacca ccatgcccgg catcggcgcc
     1861 gccacgtggg ccgggttgcc cgcctcggcc cggcgccggg cggccgccgc cggtcccagc
     1921 gcccggtccc ggaccaccgc ctggcggggc tggccgttga gctcgaagaa caccacccgg
     1981 cgcccttcgc cgtcggggtc cccgacggcc aggcagcgga tgatcagcgt cttgccccgg
     2041 tcgatgtgga cggcgagttc ctcgtcggga tcgacgccgt agaagaaggc cggggtgggc
     2101 aggacgctga cgtcgccgaa ggtccgccgg tgctcggcga agtcggtgaa gaccttcggg
     2161 tacatgaggt aggaggccag ctcgtcgtcg gagacctgcc ggccgatccg ggtctcggcc
     2221 tcgtgccggg cggcggcgag gtcggcgtcg ggcagcaccg cgccggggcg gaccgtgagc
     2281 ggctcccgcc ctttcagcac cttgcgctgc aacgcctccg ggaacccgcc ggccggctgg
     2341 ccgaggtcgc cgtggaagaa ctccaccacc gactcgggaa aggcgatctc ccggccggga
     2401 tcggccacct cggccggggt gaggtcgttg gccaccatgt agagggccag gtcgcccacc
     2461 accttcgacg tcggtgtcac cttcacgatg tcgccgaa
//
LOCUS       DATGJT010000303         6504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1490708, whole genome shotgun sequence.
ACCESSION   DATGJT010000303 DATGJT010000000
VERSION     DATGJT010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6504
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490708"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..899
                     /locus_tag="VKX24_05185"
     CDS             <1..899
                     /locus_tag="VKX24_05185"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011292124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ07909.1"
                     /translation="PRWERPFRPAEQWAFRHLPGVQQLARAGIYWSREQMVAGFVVAP
                     GLMRAAERLARRHLRQSVPDPALRARLTPDYRIGCKRILLSDDYLPALTQPNVDLVAA
                     GVAEVRARSVVAADGGEHAVDTIIFGTGFHVTDVPVADRITGRGGETLKRHWAGGMRA
                     YKGTAVAGFPNLFLLVGPNTGLGHSSQVFMIESQIAYVLDAVRHLRRTGDVVEVRDDA
                     EAAWDAGVQRAMARTVWTTGGCASWYLDDRGRNTTLWPGSTWRFRRRTARFDPEAYQG
                     VPENAANPTWRTPPTLVNSPAT"
     gene            complement(824..2059)
                     /locus_tag="VKX24_05190"
     CDS             complement(824..2059)
                     /locus_tag="VKX24_05190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07910.1"
                     /translation="MSLLAVMAMGTGAPPVRAAVGVSPTADTTWGTAVAETGKAARVL
                     ALAASGGVVYLGGDFLAVSPPGSKDASGDVARHHLAAFADGGTRLAGWDPDADDEVQA
                     LVAAPDGKRIYAGGMFHHIGNGPAVRVAALDPVTGAPDRTFAPPRPDGVVRALALSPD
                     GRVLYLGGDFDGLITADGAVVNRPHVAALDAATGALSDWDPPRDTGGRYYGHAGTPDK
                     SRAGGVYAIAPSADGTTVHVGGTFLSWAGHSGIVSLDAATARPTPWQARIDRPVFGLA
                     RSSDGHTFYAAAGGAGGAMYAFRPHGPPGGVWQVKTDGDVVAVVETGTGVFVLGHYDN
                     IVRPGSSCWQYCPDGMAREHLSAFDRTGRIEDWNPVANTPTGPYAAAADAGHVYVAGE
                     FTKVGGVRHVGFAAFSGTP"
     gene            complement(2177..3358)
                     /locus_tag="VKX24_05195"
     CDS             complement(2177..3358)
                     /locus_tag="VKX24_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018332025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ07911.1"
                     /translation="MPEELDLPWCFDDEHIAWQKTIQEFCQRVVAPGAVQRDLEGRFD
                     PDLIGEVGRLGAFGLRVPEAYGGSGADLRSMCIAAEEFAVVDSSLAVTVHVQAISAAL
                     FHHLASEDLRAEYLPAMTSGESFCAFGLTEPTGGSDAGQIATRARREGSDWVIDGAKQ
                     FITNSGTPFSRHVILFAAHERDGAAPAGARAPISAFLVPLDAPGVTVGPKYPKMGWRS
                     SDTHPLYFDGVRVPAHHLLGQEGRGYREALAFLTWARIPIAAMSAGLARGCLEATLEF
                     VASRESFGKPLTAHQAVAFGVADLSAMTDTARLLTYDAAWKYDTGRPIEREAAVSKLM
                     ASELANQVAYKASQLHGGYGFMDDSDVTRHYRDARILTIGEGTSEVQRMLIARGLGLP
                     V"
     gene            complement(3360..4163)
                     /locus_tag="VKX24_05200"
     CDS             complement(3360..4163)
                     /locus_tag="VKX24_05200"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HLJ07912.1"
                     /translation="MPGNGERVGDVVLTQDGPVLRATIDRPEARNAISPSVVDGLEAA
                     VRRARDVDARVLVVRGAGGTFCAGADLGFVLGTIDQPGALEPGGAFVSVIDRLNRVLN
                     EMEGAPFATLAVVEGFALAGGCELLLACDVVVADEAARIGDRHLELGLLPGGGASVRL
                     YRALSPARARWLLLSAEMISGREAAEWGLVTRAVPGAELDAVAEAMIARLAARNGDSL
                     AGAKEMIAAARDVPIADGLAAEQRIFRDHMGKNDAVRAALARFLGPKER"
     gene            complement(4163..4756)
                     /locus_tag="VKX24_05205"
     CDS             complement(4163..4756)
                     /locus_tag="VKX24_05205"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLJ07913.1"
                     /translation="MARPGTARGERRERILASATSLFEENGFHGAGIDDIAAAAGVTG
                     PAIYRHFKNKDAVLVALFDRLAERLGAILDRVAGEVAADGSDGHRGALETLVRLHVRL
                     AFEDRALIVVYISEERNLPETERRRVRRFQRAYVEAWADLLRPLRPDLSGDERRTAAH
                     AAIGLLNSAGYRRQVGLPRAEAEAMLARMALVALLEA"
     gene            4907..5074
                     /locus_tag="VKX24_05210"
     CDS             4907..5074
                     /locus_tag="VKX24_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07914.1"
                     /translation="MERAMRRLAAVVPALALVAGLALAARPPVPAEDHSGVCVGSMQV
                     VACVPPDGAQP"
     gene            complement(5079..5984)
                     /locus_tag="VKX24_05215"
     CDS             complement(5079..5984)
                     /locus_tag="VKX24_05215"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ07915.1"
                     /translation="MNELLPALYDHLEPVALRIARRAAVLEPVDAQRAYLVGVARQIL
                     EHGSFRAEAPSLVTPPGLEGTLGWFKLLDVHLEDFVAGRIDAPEIIAQGGGRLWETFQ
                     AHDLVCAVFGHGVARALGPTLPGADVLELGTGTGGTTRRMAADLRGASRVVLSDLRQS
                     FLDRVAAGLPGVHVETAVVDINRPPAELGRFDVVFSTNCVHVARDLPVTLEWIRRCLK
                     PGGALVLGEGSHYSEDVPSPVSLVLSLFNGWWDVPTSPERPQPGFLLPEHWFAAFRAA
                     GFQHVSMERWTDGLRTFGGVYWAFA"
     gene            complement(6107..>6504)
                     /locus_tag="VKX24_05220"
     CDS             complement(6107..>6504)
                     /locus_tag="VKX24_05220"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLJ07916.1"
                     /translation="PAFCALGLSPDSGTSYHLTRALGSVAANAAFLRNRRIPAAELAA
                     RGLADEVVPDGEVWAVAGRLAAEVAGAAPGALLATRRLVDAASGQSFDAHLDAEAREI
                     TELWNGADVLEGVSAFLERRRPKFLGAGT"
BASE COUNT          873 a         2377 c         2446 g          808 t
ORIGIN      
        1 tcccccggtg ggagcggccg ttccggcccg ccgagcagtg ggccttccgg cacctcccgg
       61 gcgtccagca gttggcccgg gccgggatct actggagccg ggagcagatg gtggcggggt
      121 tcgtcgtggc ccccgggctc atgcgggcgg ccgagcggct ggcccggcgc catctccggc
      181 agtcggtgcc cgatcccgcc ctgcgggccc ggctgacgcc cgactaccgc atcggatgca
      241 agcggatcct cctctccgac gactacttgc cggccttgac gcagcccaac gtcgacctcg
      301 tcgccgccgg cgtggccgag gtccgggccc ggtcggtggt ggccgccgac ggcggcgaac
      361 acgcggtcga cacgatcatc ttcgggacgg gcttccacgt gaccgacgtc cccgtcgccg
      421 accggatcac cggccggggc ggcgagaccc tgaagcggca ctgggccggc ggcatgcggg
      481 cctacaaggg gacggcggtg gccggcttcc ccaacctgtt cctgctcgtc ggccccaaca
      541 ccggcctcgg ccacagctcc caggtgttca tgatcgagtc gcagatcgcc tatgtcctcg
      601 acgccgtccg ccacctccgc cggacgggcg acgtcgtcga ggtccgcgac gacgccgagg
      661 ccgcctggga cgccggcgtc cagcgggcca tggcccgcac ggtgtggacg acgggcggct
      721 gcgccagctg gtacctcgac gaccggggcc gcaacacgac gctctggccg ggttccacct
      781 ggcgcttccg gcgccggacg gcccgcttcg acccggaggc ctatcagggc gtcccggaga
      841 acgccgcgaa cccgacgtgg cgcacgccgc ccaccttggt gaactcgccc gcgacgtaga
      901 cgtggccggc gtcggcggcg gcggcgtagg gaccggtcgg cgtgttggcc accgggttcc
      961 agtcctcgat cctcccggtg cggtcgaagg ccgagaggtg ctcccgggcc atgccgtcgg
     1021 ggcagtactg ccagcagctc gagccgggcc ggacgatgtt gtcgtaatgg ccgaggacga
     1081 agacgccggt gccggtctcc accaccgcca cgacgtcgcc gtcggtcttc acctgccaga
     1141 cgcccccggg cgggccgtgg ggccggaagg cgtacatggc gccgcccgcc ccgccggcgg
     1201 cggcgtagaa cgtgtggccg tcactgctgc gggccagtcc gaagaccggc cggtcgatgc
     1261 gggcttgcca cggcgtcggc cgggcggtgg cggcgtcgag gctcacgatc ccggagtgcc
     1321 ccgcccagga gaggaacgtg cccccgacgt ggacggtggt gccgtcggcc gagggggcga
     1381 tggcgtagac gccgccggcc cgggacttgt ccggcgtgcc ggcgtggccg tagtagcggc
     1441 ccccggtgtc cctgggcggg tcccagtcgc tgagggcgcc ggtggcggcg tcgagggccg
     1501 ccacgtgggg ccggttcacg acggcgccgt cggcggtgat cagcccgtcg aagtcacccc
     1561 cgaggtacag cacccggccg tcgggggaca gcgccagcgc ccgcacgacg ccgtccggcc
     1621 tcggcggcgc gaacgtccgg tcgggggccc cggtcacggg gtcgagggcg gccaccctga
     1681 ccgccggccc gttcccgatg tggtggaaca tcccgccggc gtagatgcgc ttcccgtccg
     1741 gggcggccac gagggcctgg acctcgtcgt cggcgtcggg atcccagccc gccagcctcg
     1801 tgccgccgtc ggcgaaggcg gccaggtgat ggcgggccac atcgcccgag gcgtccttcg
     1861 accccggcgg cgagaccgcc aggaagtcgc cgccgaggta gacgacaccc ccgctcgccg
     1921 ccagcgccag cacccgggcg gccttgccgg tctcggcgac ggcggtcccc cacgtggtgt
     1981 cggcggtagg ggagacgccg acggcggccc ggacgggcgg agcaccggtc cccatcgcca
     2041 tcacagccag caaagacacc accagcaagt gtcgccgagc catccgccac tgccccctcg
     2101 gttcacactg ccatcacctt gacgcagtgg gagcagaagc gtcaactcaa gctttcactg
     2161 cctccgatcg cgacgctcag accggcaggc cgaggccccg ggcgatcagc atgcgctgga
     2221 cctccgacgt gccctcgccg atggtcagga tgcgggcgtc gcggtagtgg cgggtcacgt
     2281 cggagtcgtc catgaagccg tagccgccgt ggagctggct ggccttgtag gccacctggt
     2341 tggcgagctc cgaggccatg agcttcgata ccgccgcctc ccgctcgatc gggcggccgg
     2401 tgtcgtactt ccaggcggcg tcgtaggtca ggagccgggc ggtgtcggtc atggccgaca
     2461 ggtcggccac gccgaaggcc acggcctggt gggcggtgag cggcttgccg aaggattccc
     2521 gggacgccac gaactccagg gtcgcctcca ggcagccccg ggccaggccg gccgacatgg
     2581 cggcgatcgg gatgcgggcc caggtgagga aggccagcgc ctcccggtag ccccggccct
     2641 cctgtccgag gaggtggtgc gccggcaccc ggacgccgtc gaagtacagc gggtgggtgt
     2701 cggaggaccg ccagcccatc ttcgggtact tcggcccgac ggtcacgccg ggggcgtcga
     2761 gcggcacgag gaaggcggag atcggcgccc gggcgccggc cggcgccgcg ccgtcgcgct
     2821 cgtgggcggc gaagaggatc acgtgcctgg agaacggcgt gccggagttg gtgatgaact
     2881 gcttggcacc gtcgatcacc cagtcggagc cctcccgccg ggcccgggtg gcgatctggc
     2941 cggcatcgga gcctccggtg ggctcggtca gcccgaaggc gcagaagctc tccccggagg
     3001 tcatggccgg caggtactcg gcccggaggt cctccgacgc caggtggtgg aacagggcgg
     3061 cggagatcgc ctggacgtgg acggtgacgg ccagcgaaga gtcgaccacg gcgaactcct
     3121 cggcggcgat gcacatgctg cgcaggtcgg cgccggaccc gccgtaggcc tcgggcaccc
     3181 gcagcccgaa ggcgccgagc cggcccacct cgccgatgag gtcgggatcg aaccggccct
     3241 cgaggtcccg ctgcaccgcg ccgggcgcca ccacccgctg gcagaactcc tggatggtct
     3301 tctgccaggc gatgtgctcg tcgtcgaagc accagggaag gtcgagctct tcgggcatgt
     3361 cagcgctcct tcggtcccag gaagcgggcc agggcggccc gcaccgcatc gttctttccc
     3421 atgtggtcac ggaagatccg ctgctcggcg gccaggccgt cggcgatcgg gacgtcgcgg
     3481 gcggcggcga tcatctcctt ggcaccggcc agcgagtcgc cgttgcgggc cgccagccgg
     3541 gcgatcatgg cctcggccac ggcgtcgagt tcggcgccgg gcacggcccg ggtgacgagg
     3601 ccccactccg ccgcctcccg gcccgagatc atctccgccg acagcagcag ccaccgggcc
     3661 cgggcggggg agagcgcccg gtacagccgc accgacgccc cgccgcccgg cagcagcccg
     3721 agctccaggt ggcggtcgcc gatgcgggcc gcctcgtcgg ccaccacgac gtcgcaggcc
     3781 aggaggagct cgcagccccc ggccagggcg aagccctcga cgacggccag cgtggcgaac
     3841 ggcgccccct ccatctcgtt cagcacgcgg ttgagccgat cgatgaccga gacgaaggcg
     3901 ccgccgggct caagggcccc gggctggtcg atggtgccga ggacgaaccc gaggtcggcg
     3961 ccggcgcaga acgtcccgcc ggccccccgg acgaccagca cccgggcgtc gacgtcgcgg
     4021 gcccggcgga cggcggcctc gaggccgtcg accaccgacg ggctgatggc gttgcgggcc
     4081 tcgggccggt cgatggtggc ccgcagcacc ggcccgtcct gggtgaggac gacgtcgccg
     4141 acccgctcac cgttccccgg catcaggcct ccagcagcgc cacgagcgcc atccgggcca
     4201 gcatggcctc ggcctcggcc cgggggagcc cgacctggcg gcggtagccg gcggagttga
     4261 gcagcccgat ggcggcgtgg gccgcggtgc ggcgctcgtc gccggagagg tccgggcgca
     4321 aggggcggag caggtcggcc caggcctcga cgtacgcccg ctggaaccgg cggacccggc
     4381 gccgctccgt ctcggggagg ttccgctcct cggagatgta gacaacgatg agggcccggt
     4441 cctcgaaggc cagccggacg tggagccgca ccagtgtttc gagcgccccc cggtgcccgt
     4501 ccgagccgtc ggcggcgacc tcgccggcca ccctgtcgag aatggcgccg agccgttccg
     4561 ccagccggtc gaacagcgcc acgaggacgg cgtccttgtt cttgaagtgg cggtagatgg
     4621 ccgggcccgt gacgccggcg gccgcggcga tgtcgtcgat gccggcgccg tggaacccgt
     4681 tctcctcgaa cagcgacgtc gccgaggcga ggatgcgctc ccgccgttcg ccccgtgccg
     4741 tacccggcct cgccatgctc gccccttctt cgctcagagg tgaacgaacg taaaccttcc
     4801 gtcccgccgg gggcaaaccc ggccgccgac accaggggtg actttggcaa cggacggtta
     4861 caggttagga ttcgagccgc acccgcctcc ggggaaggag gtaccgatgg agcgtgcgat
     4921 gcgccggctc gcggcggtgg tcccggccct ggccctcgtg gccggcctgg ccctggccgc
     4981 ccgtccgccc gtgccggccg aggatcacag cggcgtctgt gtcggcagca tgcaggtcgt
     5041 ggcctgcgtg ccgcccgacg gcgcccagcc ctagggcctc aggcgaaggc ccagtagacg
     5101 ccgccgaagg tgcggaggcc gtcggtccag cgctccatcg acacgtgctg gaatccggcg
     5161 gcccggaagg cggcgaacca gtgctccggc agcaggaagc ccggctgggg ccgctccggc
     5221 gacgtcggca cgtcccacca gccgttgaac agcgacagca ccagcgacac cggcgagggc
     5281 acgtcctcgg agtagtgcga gccctcgccg aggaccagcg ccccgccggg cttgaggcac
     5341 cggcggatcc actccagcgt caccggcagg tcccgggcca cgtggacgca gttggtcgag
     5401 aagaccacgt cgaagcggcc gagctcggcc ggcggccggt tgatgtcgac gacggcggtc
     5461 tccacgtgga cgccggggag gccggcggcc acccggtcga ggaagctctg ccggaggtcg
     5521 gacagcacca cccgactggc cccccgaagg tcggcggcca tgcgccgggt ggtccccccg
     5581 gtgccggtcc cgagctcgag gacgtcggcc ccgggcagcg tcggcccgag ggcccgggcc
     5641 acgccgtggc cgaagacggc gcagacgagg tcatgggcct ggaacgtctc ccagaggcgg
     5701 ccgccgccct gggcgatgat ctcgggagcg tcgatgcggc cggcgacgaa gtcctccagg
     5761 tggacgtcga gcagcttgaa ccagcccagc gtcccctcca ggcccggcgg cgtgacgagc
     5821 gacggcgcct cggcccggaa cgagccgtgt tcgaggatct ggcgggcgac gccgaccagg
     5881 taggcccgct gggcgtcgac cggctccagg accgccgccc ggcgggcgat ccggagggcg
     5941 acgggttcca ggtggtcgta gagggccggc agcagctcgt tcatcacgcc tccttctgcc
     6001 tccgtcgtca aagttcggcg gacggaggag tcggccctgc gtgatgtgcc cgggtttcgc
     6061 ccggtttcag ggcgtcagga cgtttccatg gaaacgtcct cggcggtcac gtcccggcgc
     6121 caaggaactt cggccggcgg cgctccagga aggcgctcac gccctcgagg acgtcggcgc
     6181 cgttccacag ctccgtgatc tcccgggcct cggcgtcgag gtgggcgtcg aagctctgcc
     6241 cggaggcggc gtcgaccagc cgccgggtgg ccagcagggc gccgggggcg gcgccggcca
     6301 cctcggcggc caggcggccg gcgacggccc acacctcgcc gtcggggacg acctcgtcgg
     6361 ccagcccccg ggcggccagc tctgcggccg ggatccggcg gttgcggagg aaggcggcgt
     6421 tggccgccac gctcccgagc gcccgggtga ggtggtacga cgtgccgctg tcgggggaga
     6481 ggccgagggc gcagaacgcc ggca
//
LOCUS       DATGJT010000304         2023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_352443, whole genome shotgun sequence.
ACCESSION   DATGJT010000304 DATGJT010000000
VERSION     DATGJT010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352443"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /gene="ftsY"
                     /locus_tag="VKX24_05225"
     CDS             <1..1021
                     /gene="ftsY"
                     /locus_tag="VKX24_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HLJ07917.1"
                     /translation="STRRRRATGTPRRPARPAPSGPARGPDAPAVTAVAAPEVATPEA
                     PPALRERLGRTRGLFAPLRGLAGRGDRQAAFAAAEEALLRADVGVETTGAILGALKDD
                     RADADGLTDALAGELAAVFAENPDRTLRLETEPGVVNVWLFVGVNGVGKTTTIGKVAL
                     AQREGGRSVLLAAGDTFRAAAADQLALWAERAGAEILRGAEGSDPSSVVFDAVQRAKA
                     RGNDLVLADTAGRLHTKVNLVEELRKIRRVADREPGRVTEVLLVLDATTGQNALAQAR
                     EFTGAVGVTGVVLTKLDGTAKGGVVIPIERQLGLPVKLVGVGEGPGDLIAFDPDAFVD
                     ALLGQ"
     gene            1045..>2023
                     /locus_tag="VKX24_05230"
     CDS             1045..>2023
                     /locus_tag="VKX24_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HLJ07918.1"
                     /translation="MFDALSDRLERVAGRLRSRGRISPADLDEALAEIRTALLDADVE
                     FGVARHFVDAVRERCSGEALSRSLTPGQQVIKAVHEQLVEALGGEALRLTYASRPPTV
                     ELLAGLQGAGKTTAAAKLATWWRGQGRNPLLVGADLQRPAAVEQLRVLGAQAGVSVFS
                     QPGNPVETAAAGVEEARRLGRDLCIVDTAGRLTVDDALMDEVRRISARTNPHYTFLVI
                     DAMTGQDAVATARAFHEALALDGVILSKLDSDARGGAALSVKEVVGRPIVFASTGERL
                     ADLDLFHPDRMADRILGMGDMLTLIEQAERTMDEEVVARSADRLLSGRFT"
BASE COUNT          252 a          774 c          764 g          233 t
ORIGIN      
        1 ctcgacccgg cgccgccggg cgacgggcac gcctcgacgc ccggcgcgcc cggctccgag
       61 cgggccggcc cggggcccgg acgcgcccgc cgtcaccgcg gtggccgcgc ccgaggtggc
      121 cacccccgag gccccgccgg ccctgcgcga gcggctggga cggacgaggg ggctcttcgc
      181 tcccctgcgg ggcctcgccg ggcggggcga ccgccaggcc gccttcgccg ccgccgaaga
      241 ggcgttgctc cgggccgacg tcggggtgga gacgaccgga gccatcctcg gcgcgctcaa
      301 agacgaccgg gcggacgccg acgggctgac cgacgccctg gccggcgagc tggccgcggt
      361 cttcgccgag aaccccgacc ggaccctgcg cctcgagacc gagccggggg tggtcaacgt
      421 ctggctgttc gtcggggtga acggggtggg caagaccacc accatcggca aggtggccct
      481 cgcccagcgc gaggggggcc ggtcggtcct gctggcggcg ggggacacgt tccgggcggc
      541 cgccgccgac caactggccc tgtgggccga gcgcgccggg gccgagatcc tccggggcgc
      601 cgaggggtcg gacccctcct ccgtcgtctt cgacgccgtg cagcgggcca aggcccgggg
      661 caacgacctc gtgctggccg acaccgccgg ccggctgcac accaaggtca acctggtcga
      721 ggagctgcgc aagatccgcc gggtggccga ccgggagccg ggccgggtga ccgaggtcct
      781 cctcgtcctc gacgccacca ccgggcagaa cgcgctcgcc caggcccgcg agttcaccgg
      841 cgcggtcggg gtcaccgggg tcgtgctgac caagctggac gggacggcca agggcggcgt
      901 cgtgatcccg atcgagcgcc agctgggcct gccggtgaag ctggtcggcg tgggcgaggg
      961 ccccggtgac ctcatcgcct tcgaccccga cgccttcgtg gacgcgctgc tcggccaata
     1021 gggctccggt agcctgaacg tcccatgttc gacgcgctct ccgaccggct cgagcgcgtc
     1081 gccgggcgcc tgcgcagccg cggccggatc tccccggccg acctcgacga ggcgctggcc
     1141 gagatccgca cggcgctgct cgacgccgac gtcgagttcg gggtggcccg gcacttcgtc
     1201 gacgcggtgc gcgagcgctg cagcggcgag gccctgtcga ggagcctgac cccgggccag
     1261 caggtcatca aggccgtcca cgagcagctg gtggaggcgc tcggcgggga ggcgctccgc
     1321 ctcacctacg cgtcgcggcc gccgacggtg gagctgctgg ccggcctcca gggcgcgggc
     1381 aagacgacgg ccgccgccaa gctggccacg tggtggaggg gccagggccg caacccgctg
     1441 ctcgtcggcg ccgacctcca gcggcccgcc gccgtcgagc agctccgggt gctcggcgcc
     1501 caggccgggg tgagcgtctt cagccagccg ggcaaccccg tcgagaccgc ggccgccggc
     1561 gtcgaggagg cgcgccggct ggggcgcgac ctgtgcatcg tcgacaccgc cggccggctc
     1621 acggtcgacg acgcgctcat ggacgaggtc cggcggatct ccgcccggac gaacccgcac
     1681 tacacgttcc tcgtcatcga cgccatgacc ggccaggacg cggtggccac ggcccgggcc
     1741 ttccacgagg ccctcgccct cgacggggtc atcctctcca agctcgacag cgacgcccgc
     1801 ggcggggccg ccctcagtgt gaaggaggtc gtcgggcggc cgatcgtctt cgcctcgacc
     1861 ggcgagcgac tggccgacct cgacctcttc cacccggacc ggatggccga ccggatcctc
     1921 ggcatgggcg acatgctcac gctgatcgag caggccgagc ggacgatgga cgaggaggtg
     1981 gtggcccgct cggccgaccg cctcctgtcc ggccgcttca ccc
//
LOCUS       DATGJT010000305         4291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1490884, whole genome shotgun sequence.
ACCESSION   DATGJT010000305 DATGJT010000000
VERSION     DATGJT010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4291
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490884"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VKX24_05235"
     CDS             complement(<1..696)
                     /locus_tag="VKX24_05235"
                     /inference="COORDINATES: protein motif:HMM:NF014923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="THUMP domain-containing protein"
                     /protein_id="HLJ07919.1"
                     /translation="MNPDLLLAHYHEIGLKGRNRPRFERALRDNLKRALGDSAARIRL
                     VSGRVEILEPKPDALERVTRVFGVANVAPVLVAPADLDAIVATAVDVAADADTLTPFE
                     TFEVRARRARTSFAATSQRVNETVGDAIRIGLGKRVNLSRPDVSVRIEIVHDKAYVSA
                     AKIPGPGGLPVGTAGPVVALLSAGIDSPVAAWRMMRRGADPVAVHFHGQPFTDRSSEQ
                     KVGQLVAVLGRWGY"
     gene            complement(693..1340)
                     /locus_tag="VKX24_05240"
     CDS             complement(693..1340)
                     /locus_tag="VKX24_05240"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HLJ07920.1"
                     /translation="MPGGTVFWDVDTQVDFMLPSGALAVPGAERLLPNLGRLTAGARS
                     AGITIVHTADDHGPDDPEIAAAPDFVETFPPHCLRGTPGAERLAETAARPEAADVPPG
                     GDGVDVAAVAAAPEIVLRKNRFDAFSNPVTAPLLRALAPDRVVVYGVALEVCDRYAVD
                     GMLALRAGFEIVLVEDAVAALDPASGAELVDRWRERGVRIATTQEVLREMGDPGL"
     gene            complement(1360..2532)
                     /locus_tag="VKX24_05245"
     CDS             complement(1360..2532)
                     /locus_tag="VKX24_05245"
                     /inference="COORDINATES: protein motif:HMM:NF014433.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsA-related P-loop ATPase"
                     /protein_id="HLJ07921.1"
                     /translation="MTDNLDRLLAAKSIAVFCGPGGVGKTSVAAASAAVAASRLGGKV
                     LVVTVDPAKRLADALGLSALGNLERPVPAERLKAAGLDVRDGLWAAMLDTKQSWDDLV
                     LRYARDEETAYRILENRLYHNITARFVQSHDYIAMERLHEIHAEGGYDLIVVDTPPTR
                     NALDFLEAPERMADFFGSRLLRWLTMPYRVGGRRGARMMNLASKPFYQVADRILGSQF
                     LEDIAEFFLNFQTMYEGFVTRARSVEALLHDRRTTFVVVSTLEAAPLREAEFFVSELQ
                     ARKLHLGAVVLNKTLPDYLQGAAGDAAARALVADPGPAAASATGADPELDPATVSRVL
                     TTIGESFLNFELAAKREAELRAELGRLSAPVLRVPAFEEDIHDLAGLARLGQCLFG"
     gene            complement(2529..3500)
                     /locus_tag="VKX24_05250"
     CDS             complement(2529..3500)
                     /locus_tag="VKX24_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsA-related P-loop ATPase"
                     /protein_id="HLJ07922.1"
                     /translation="MAAPSSPDLLDRRLLFFTGKGGVGKSTVSAAMALLAAQLGRRVL
                     LVSADGRGDIAAFFEKRPVGFRPEPVFPGLSAMAMDTEASLQEYLRLNLRVPIPGRVG
                     PLAKVFDFVATAAPGVKEILTIGKICWEVRESLERRAGWDLVVVDAAATGHIVAQLGA
                     PQAIDELVAVGPIKTQTGWMTDLLSDPRVTALNVVTTPEEMPVHETIELVGRVRETLP
                     VPLGAVVVNRVLPELFTHADEVAFEALRQPAAVAALEGAVGSGVDDVLTAADLAVTLR
                     RTRSAHLSRLRQAVELPLLYLPELFIRAQGMRVTRMVADALGEELGL"
     gene            complement(3518..3748)
                     /locus_tag="VKX24_05255"
     CDS             complement(3518..3748)
                     /locus_tag="VKX24_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010061602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3107 domain-containing protein"
                     /protein_id="HLJ07923.1"
                     /translation="MEVRIGVVYSAKELSVELDGKADEVVSTVEAALKGGAPVIWLTD
                     KKGRRVGVPSDKVAYIEVAEEDTAHRVGFGPG"
     gene            complement(3791..>4291)
                     /locus_tag="VKX24_05260"
     CDS             complement(3791..>4291)
                     /locus_tag="VKX24_05260"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HLJ07924.1"
                     /translation="IVGRIGDLIIADHLGKPTHFFLGYVCPDKVTGSPCLAPIGQAVH
                     QPALYDFVSAIFLLLLLLRLRRTPHYDGFLTLVFGAWYGTGRFIEDFFRVDVTHGTGL
                     TGSQWTAVAVTSLCLFCLLVLKDTPWRSGRGAFASIPARHRPEEEEPAAAVPDADADQ
                     PKEDAE"
BASE COUNT          602 a         1526 c         1600 g          563 t
ORIGIN      
        1 gtacccccag cggcccagca ccgccaccag ctggcccacc ttctgctccg acgaccggtc
       61 ggtgaacggc tggccgtgga agtggacggc gacggggtcg gcgccccggc gcatcatcct
      121 ccaggccgcc accggcgagt cgatcccggc cgacaggagg gcgacgaccg gaccggcggt
      181 gcccaccggc aggccgccgg ggccggggat cttggccgcc gaaacgtagg ccttgtcgtg
      241 gacgatctcg atccgtaccg acacatcggg ccgcgagagg ttgacccgct tgccgaggcc
      301 gatccggatg gcgtcgccga cggtctcgtt gacccgctgg ctggtggcgg cgaacgacgt
      361 gcgggcccgc cgggcccgga cctcgaacgt ctcgaagggg gtcagcgtgt cggcgtcggc
      421 ggcgacgtcg acggcggtgg cgacgatggc gtcgagatcg gccggagcga cgaggacggg
      481 cgccacgttg gccacgccga agacccgcgt gacgcgttcg agggcatcgg gcttcggttc
      541 caggatctcg acgcggccgc tgacgaggcg gatccgggcc gccgagtcgc ccagcgcccg
      601 cttgaggttg tcccgcaggg cccgttcgaa gcggggccgg ttgcggccct tgaggccgat
      661 ctcgtggtag tgggcgagga ggaggtcggg gttcacagcc ctggatcacc catttctcgc
      721 agcacctcct gcgtggtggc gatccgcacg ccgcgctccc gccaccggtc gacgagctcg
      781 gctccggagg cggggtcgag ggcggcgacg gcgtcctcca ccaggacgat ctcgaagccg
      841 gcccgcagcg ccagcatgcc gtcgacggcg tagcggtcgc agacctcgag ggccacgccg
      901 tagacgacga cgcggtccgg cgccagcgcc cggagcaacg gcgccgtgac gggattggag
      961 aaggcgtcga aacggttctt gcgcaggacg atctccgggg cggcggcgac ggcggcgacg
     1021 tcgacaccgt ccccgccggg cgggacgtcg gccgcttccg gccgggcggc ggtctcggcc
     1081 aggcgctcgg cgcccggcgt cccccgcagg cagtggggcg ggaacgtctc gacgaagtcg
     1141 ggagcggcgg cgatctccgg gtcgtcgggc ccgtggtcgt cggcggtgtg gacgatcgtg
     1201 attccggcgg accgggcgcc ggccgtcagc cggccgaggt tgggcaacag ccgctcggcg
     1261 cccggcacgg ccagcgcgcc ggaggggagc atgaagtcga cctgggtgtc gacgtcccag
     1321 aacacggtcc cgcccggcat accggggatt gtcgcactct cagccgaaga ggcactggcc
     1381 gagccgggcc aggccggcca ggtcgtggat gtcctcctcg aaggccggca cccgcagaac
     1441 cggcgccgag aggcggccga gctccgcccg cagctccgcc tcccgcttgg ccgccagctc
     1501 gaagttgagg aacgactcgc cgatggtggt gagcacccgg gacaccgtgg ccgggtcgag
     1561 ctcggggtcg gccccggtgg cggacgccgc cgccggcccg gggtccgcca ccagcgcccg
     1621 ggccgcggcg tcgcccgccg cgccctggag gtagtcgggc agcgtcttgt tgaggacgac
     1681 ggccccgagg tgcagcttgc gggcctggag ctcggagacg aagaactccg cctcccgcag
     1741 cggcgccgct tccagcgtgg agacgacgac gaacgtcgtg cgccggtcgt ggagcagcgc
     1801 ctccaccgac cgggcccggg tcacgaaccc ctcgtacatc gtctggaaat tgaggaagaa
     1861 ctcggcgatg tcctccagga actggctgcc gaggatgcgg tcggcgacct ggtagaaggg
     1921 cttgctggcc aggttcatca tccgggcgcc ccgccggccg ccgacccggt agggcatggt
     1981 gagccagcgc agcagccggc tgccgaagaa gtcggccatc cgctcggggg cttcgaggaa
     2041 atcgagtgcg ttcctggtcg ggggggtgtc gacgacgatc aggtcgtagc caccctcggc
     2101 gtggatctcg tggagccgct ccatggcgat gtagtcgtgg ctctggacga accgggcggt
     2161 gatgttgtgg tacagccggt tctcgaggat ccggtaggcc gtctcctcgt cccgggcgta
     2221 gcgcagcacc aggtcgtccc agctctgctt ggtgtcgagc atggcggccc acagcccgtc
     2281 gcggacgtcg agcccggcgg ccttgaggcg ctcggcgggg acgggccgct ccaggttccc
     2341 gagcgccgag aggccgaggg cgtcggccag ccgcttggcc gggtcgacgg tgacgacgag
     2401 caccttgccc cccagccggc tggccgccac cgccgccgag gcggccgcca ccgaggtctt
     2461 cccgaccccg ccgggcccgc agaacacggc gatcgatttg gccgccagca gccggtcgag
     2521 gttgtccgtc acagcccgag ctcctcgccc agggcgtccg ccaccatgcg cgtcacccgc
     2581 atgccctgcg cccggatgaa cagctccggc aggtacagca gcggcagctc caccgcctgc
     2641 cggagccggc tgaggtgcgc cgaccgggtg cggcgcaggg tgacggccag gtcggcggcg
     2701 gtcagcacgt cgtcgacgcc ggagccgacc gccccctcca gcgccgcgac ggccgccggc
     2761 tggcgcagcg cctcgaaggc cacctcgtcg gcgtgggtga acagctccgg cagcacccgg
     2821 ttgaccacca ccgctcccag tgggacgggg agggtctccc gtacccgccc cacgagctcg
     2881 atcgtctcgt ggaccggcat ctcctccggt gtcgtcacca cgttgagggc cgtgacccgg
     2941 ggatccgaca ggaggtcggt catccagccg gtctgcgtct tgatcggccc gacggccacg
     3001 agctcgtcga tggcctgggg ggcgccgagc tgggccacga tgtggccggt ggcggcggcg
     3061 tcgacgacca cgaggtccca gccggcccgg cgctccagcg actcccgcac ctcccagcag
     3121 atcttcccga tggtcaggat ctccttgacc cccggcgcgg cggtggcgac gaagtcgaag
     3181 accttggcca gcggcccgac ccggccgggg atcggcaccc gcaggttcag ccggaggtac
     3241 tcctggagcg aggcctcggt gtccatggcc atggccgaga ggccggggaa caccggctcg
     3301 ggccggaagc cgaccgggcg cttctcgaag aaggcggcga tgtcgccccg cccgtcggcc
     3361 gacaccagca gcacccgccg gcccagctgg gcggcgagca gggccatggc ggccgagacg
     3421 gtgctcttgc cgacgccgcc cttccccgtg aagaagagca gccggcggtc gagcaggtcg
     3481 ggcgacgacg gagcggccat cgcccccctc ctacccccta gcccgggccg aacccgaccc
     3541 ggtgcgcggt gtcctcctcg gcgacctcga tgtaggcgac cttgtccgag gggacgccga
     3601 cgcggcggcc cttcttgtcg gtcagccaga tgacgggggc cccgcccttc agggcggcct
     3661 cgaccgtgga gacgacctcg tcggccttcc cgtcgagctc caccgagagc tccttggccg
     3721 agtagacgac gccgattctc acttccatgt ccgcgctgcc ctccgtgccg ccgctgatga
     3781 gggccgcact ctactcggcg tcttcctttg gctggtcagc gtcggcgtcc gggaccgccg
     3841 ccgccggctc ctcctcctcc ggccggtgtc gggcggggat cgaggcgaag gccccccggc
     3901 cgctgcgcca cggcgtgtcc ttcagcacca gcaggcagaa gaggcagagg ctcgtgacgg
     3961 ccaccgccgt ccactggctg ccggtcagcc cggtgccgtg ggtgacgtcg acgcggaaga
     4021 agtcctcgat gaaccggccg gtgccgtacc aggcgccgaa gaccagcgtc aggaacccgt
     4081 cgtagtgcgg cgtacgccgc agccgcagca gcaggaggag caggaagatg gccgatacga
     4141 agtcgtagag cgccggctgg tggacggcct ggccgatggg cgccaggcag ggcgagccgg
     4201 tcaccttgtc ggggcagacg tagccgagga agaagtgggt cggcttgccg aggtggtcgg
     4261 cgatgatcag gtcgccgatc cggccgacga t
//
LOCUS       DATGJT010000306         2865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1285323, whole genome shotgun sequence.
ACCESSION   DATGJT010000306 DATGJT010000000
VERSION     DATGJT010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1285323"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /locus_tag="VKX24_05265"
     CDS             complement(<1..895)
                     /locus_tag="VKX24_05265"
                     /inference="COORDINATES: protein motif:HMM:NF012795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HLJ07925.1"
                     /translation="MSVEEIAAAARAHPGLRAKRPISLVADVLGATDWAAGPGDDGAV
                     VMAGVETVVVGGEAMLPAFVAADPFAAGVAAMLANVNDLAAMGAEPLALVDTIVASEP
                     VARRALEGLRHASALYRVPVVGGHLTIHDGPPSLSAFGVGRAAPGCVLSVRNAAAGQS
                     LLLAACVEGAMRRDFPFFGSFDVRGTELAGDVRLPAAVAADGAAVAAKDVSMAGILGS
                     LGMLLEPGRLGVTVDLDALPRPAGVGLVDWLGCFPCLAFLLCAPPGREADCAAPFHQR
                     SLAAAVIGTLDDSGLLRIASEI"
     gene            938..2380
                     /locus_tag="VKX24_05270"
     CDS             938..2380
                     /locus_tag="VKX24_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013678263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HLJ07926.1"
                     /translation="MSSSPPGPPIPVLPPDVAVVNVGLPLFAEAVAAQGRPVADVDWR
                     IPAGGDAEAVAALRRLYGPRAAAIDEANAEVVRRIDRGVPLLVGLAPGHEVVPGFGDR
                     TILHCGPPIEWRDVCDPLRRSIRAAVMAEGWAGEPEEASALVEKGEVTLRPANHHDTV
                     VPMASAVGPSSWMWIVENREGGTRAFSAINQGPGEVPWFGRETPAAVERLRFLRDVAG
                     PLLHEAVGAAVAAGGPIDVFSLAAQGLQMGDDVHMRTQASTNLLIRALLPQLLALESP
                     ARVELGRFLAGNHLFFLNLAMAAARSVLAWARDVAGSSIVVGMARNGTTFGVRLPGSD
                     EWYLAPSPPVGHALYYSGQGPETSAPDIGDSALLELVGLGGPAAAGSPAVAGFVGGTM
                     ADAVRLTTDMDRICAGRSTRFKLALLDFRGTPIAVDVRRVVETGITPRINTGILHKFD
                     GSGQVGAGVAVAPVECFRSALLALDRKLAS"
     gene            2443..>2865
                     /locus_tag="VKX24_05275"
     CDS             2443..>2865
                     /locus_tag="VKX24_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07927.1"
                     /translation="MLWARDADGPAAWLRLPDAVIGLAPPGAPLGPNWVRRREPWPVL
                     AEGDPIVVDADGLRTGDGRLVLDRRHALGWAGPLPEATTLAAAGTRALVTDALAPQRR
                     SVLLDPPWRDTARPAVALLGRVAPLDGLKVAAEALGGLG"
BASE COUNT          335 a         1071 c         1111 g          348 t
ORIGIN      
        1 cgatctcgga ggcgatccgc agcagtccgg agtcgtccag cgtgccgatc accgccgcgg
       61 ccaggcttcg ctggtggaac ggcgcggcgc agtccgcctc ccggcccggc ggcgcgcaga
      121 gcaggaaggc caggcagggg aaacagccga gccagtcgac gaggccgacg cccgccgggc
      181 ggggcagggc gtcgaggtcc acggtgaccc cgagccggcc cggctcgagc agcatgccga
      241 gcgagccgag gatcccggcc atgctgacgt ccttggccgc caccgccgcg ccgtcggcgg
      301 cgacggcggc cgggagccgg acgtcgcccg ccagttcggt gccccgcacg tcgaaggacc
      361 cgaagaacgg gaagtcccgc cgcatcgcgc cttcgacgca ggcggcgagg agcagcgact
      421 ggccggcggc ggcattgcgg acggagagga cgcaccccgg ggccgcccgt ccgaccccga
      481 aggccgacaa cgacggcggg ccgtcgtgga tcgtgaggtg cccgccgacg acgggaacgc
      541 ggtagagggc cgaggcgtgc cgcagcccct cgagcgcccg gcgggccacc ggttcggaag
      601 cgacgatggt gtcgacgaga gccagcggtt cggcgcccat ggcggcgagg tcgttgacgt
      661 tggccagcat ggcggcgacg ccggcggcga acgggtcggc ggccacgaac gccggcagca
      721 tcgcctcacc gccgacgacc acggtctcga cgccggccat cacgacagcg ccgtcgtcgc
      781 ccggcccggc cgcccagtcg gtggccccga gaacgtcggc caccagcgag atcgggcgct
      841 tggcccgcag gccgggatgg gcccgggcgg cggcggcgat ctcctcgacg ctcatcgatc
      901 ttgcaccata gtgaacggtc cttctaccat cggacaggtg agctcttctc ccccgggccc
      961 gcccattccc gtcctgcccc ccgacgtggc cgtggtcaac gtcggcctcc cgctgttcgc
     1021 cgaggcggtc gccgcccagg gccggccggt ggccgacgtc gactggcgca tcccggccgg
     1081 cggcgacgca gaggcggtgg ccgccctccg ccgactctac gggccgcggg ccgccgccat
     1141 cgacgaggcc aatgccgaag tggtgcgccg catcgaccgc ggcgtccccc tgctggtcgg
     1201 gctggcgccg gggcacgagg tggtaccggg gttcggcgac cggacgatcc tccactgcgg
     1261 cccgccgatc gagtggcgcg acgtctgcga cccgttgcgc cgctcgatcc gggcggcggt
     1321 gatggccgag gggtgggccg gcgagcccga ggaggcctcc gcgctggtgg agaagggcga
     1381 ggtgacgctc cggccggcca accaccacga cacggtcgtc cccatggcgt ctgccgtcgg
     1441 gccgtcgtcg tggatgtgga tcgtcgagaa ccgcgagggc ggcacccggg ccttctcggc
     1501 catcaaccag gggccgggcg aggtgccgtg gttcgggcgg gagacgccgg cggcggtgga
     1561 gcggctgcgg ttcctgcgcg acgtcgccgg gccgttgctg cacgaggcgg tgggagcggc
     1621 ggtggcggcc ggcgggccga tcgacgtctt ctcgctggcc gcccaggggc tgcagatggg
     1681 cgacgacgtc cacatgcgga cgcaggcctc gaccaacctg ctgatccggg cgctgctccc
     1741 ccagctcctg gcgctggagt cgccggcccg ggtggagctc ggccggttcc tggccggcaa
     1801 ccacctgttc ttcctcaacc tggccatggc cgccgcccgc tcggtgctgg cctgggcccg
     1861 cgacgtcgcc gggtcgagca tcgtcgtcgg catggcccgc aacggcacga cgttcggggt
     1921 ccggctgccg ggttccgacg agtggtacct ggcgccctcg ccgcccgtcg gccatgccct
     1981 ctactactcc ggccagggcc ccgagacgag cgcccccgac atcggcgact cggcgctgtt
     2041 ggaactcgtc gggctgggtg gcccggcggc ggccggttcg ccggcggtgg cgggcttcgt
     2101 cggcgggacg atggccgacg ccgtccgcct gaccaccgac atggaccgca tctgcgccgg
     2161 ccgctcgacc cggttcaagc tggcgctgct cgacttccgg gggacgccga tcgccgtcga
     2221 cgtccgccgc gtggtggaga ccgggatcac cccccggatc aacaccggga tcctgcacaa
     2281 gttcgacggc agcggccagg tcggcgccgg cgtggccgtg gcgccggtgg agtgcttccg
     2341 ttcggccttg ctggccctcg accggaagct cgcttcctga aggagcgggc cggccggcct
     2401 cccgcgaccc ggccgctgct cggccggccc gggccgggtc gcgtgctgtg ggcccgggat
     2461 gcggacgggc cggcggcctg gctccggctg ccggacgccg tcatcggcct ggcgccgccg
     2521 ggagcgccgc tcggcccgaa ctgggtgcgc cggcgtgaac cctggccggt gctggccgag
     2581 ggcgacccga tcgtcgtcga tgccgacggg ctgcggaccg gcgacggccg cctcgtcctc
     2641 gaccggcgcc acgcgctcgg ctgggccggg ccgctgccgg aggccaccac gctggccgcg
     2701 gcggggaccc gggcgctggt caccgacgcg ctggcgccgc agcggcgcag cgtgctcctc
     2761 gacccgccgt ggcgcgacac cgccaggccg gcggtggccc tcctggggcg cgtcgcgccg
     2821 ctcgacggcc tgaaggtcgc cgccgaggcg ctcgggggcc tcggc
//
LOCUS       DATGJT010000307         3178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1491332, whole genome shotgun sequence.
ACCESSION   DATGJT010000307 DATGJT010000000
VERSION     DATGJT010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491332"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="VKX24_05280"
     CDS             complement(<1..1092)
                     /locus_tag="VKX24_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003419511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HLJ07928.1"
                     /translation="MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLMHEGEGV
                     AAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNY
                     IGTEHILLGLIREGDGVAAQVLVKLGADLNRVRQQVIQLLHGYQGKEPTSAASGSTEA
                     APSTSLVLDQFGRNLTQGAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLVGAPGVG
                     KTAVVEGLAQKIVKGEVPETIKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTR
                     GDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAA
                     LERRFQPIQVAEPTISHTIEILKGLRDRYE"
     gene            1432..2433
                     /locus_tag="VKX24_05285"
     CDS             1432..2433
                     /locus_tag="VKX24_05285"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HLJ07929.1"
                     /translation="MTVVEGLPWLAEDLVRVEEALRSAVRTGDPFLTDVASHLIGAGG
                     KRIRPALALCAGYAAGADGPVSDDVVTGAVAVELVHLGSLYHDDVIDEAATRRGVESV
                     NHRWSNIVAILAGDFLLARASSLAASLGVEVAGILAATIGELCQGQVLELQRLYDVNR
                     DEAAYFGSIAGKTASLMASACRIGAIVAGLDRPSIEALTAFGRHVGMVFQIVDDVLDL
                     TASDEELGKPSGLDLAEGIYTLPVIYALRSSPELRTLLGRPLDPDGVAQGRALTCADG
                     AVSNALAVAEEHAARAALALAEAKIDDGVADALNRLCRSIIERSRRVTPVSPGARAS"
     gene            complement(2450..>3178)
                     /locus_tag="VKX24_05290"
     CDS             complement(2450..>3178)
                     /locus_tag="VKX24_05290"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007532218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HLJ07930.1"
                     /translation="RTITLNRPAARNALSSELMQRLVEALHAAEDDPDVGCVVLTGAD
                     PAFCAGVDLKEAGAKGFPSTGVLDAKASPWWALHGMNTPVIGAVNGPAITGGLELVLQ
                     CSFLVASERAVFGDTHARVGLHPGGGLTGLLPQAIGLRRAREMSLTGNFIDAAEAHRL
                     GLVNHVVPHEELLPAARRLAGDVAGGDLRTVAALNRSYRDVAALPLGEGLALERERFR
                     TWDYDPAALEDRRRAVTERGRTQL"
BASE COUNT          413 a         1149 c         1120 g          496 t
ORIGIN      
        1 ctcgtacctg tcgcgcaggc ccttgaggat ctcgatggtg tgcgagatcg tcggctccgc
       61 gacctggatg ggctggaacc ggcgctcgag agcggcgtcc ttctccaggt acttgcggta
      121 ctcgtccagg gtggtcgcgc cgatcgtctg cagttcacca cgggcgagca tgggcttcag
      181 gatcgacgcc gcgtcgatcg cgccctctgc cgcgcccgcg ccgacgagcg tgtggatctc
      241 gtcgatgaac aggatgatgt cgccgcgggt gcggatctcc ttgagcacct tcttgagccg
      301 ctcttcgaag tcaccgcggt accgcgaccc ggcgacgagc gcgccgaggt ccagcgtgta
      361 cagctgcttg tccttgatcg tctccgggac ctcgcccttg acgatcttct gcgcgagtcc
      421 ctcgaccacc gcggtcttgc caacgccagg cgcgccgacc aggaccgggt tgttcttggt
      481 gcgccgcgac agcacctgca tgacccgctc gatttccttc tcacggccga tcaccgggtc
      541 aagcttgccc tcacgggcgc cctgcgtcag gttgcggccg aactggtcga gcaccagcga
      601 ggtcgacggc gcggcctcgg tggaaccgct cgcggccgac gtcggctcct tgccctggta
      661 gccgtgcagc aactggatga cctgctggcg gacccggttc aggtcagcgc ccagcttgac
      721 caggacctgg gcggcgacgc cgtcgccctc acggatcagg ccgagcagta tgtgctcggt
      781 cccgatgtag ttgtgaccaa gttgcagggc ctcacgcagc gaaagctcaa gcaccttctt
      841 ggcccggggg gtgaacggga tgtgccccga cggcgcctgc tggccctggc cgatgatctc
      901 ctcgacctgc tgccgcaccg cctccaggct gatcccgagc gactcgagcg ccttggccgc
      961 caccccctcg ccctcgtgca tgaggccgag caggatgtgc tccgtcccga tgtagttgtg
     1021 gttgagcagg cgggcttcct cctgggcgag gacgacgacc ctcctggctc gatcggtgaa
     1081 gcgctcgaac acgtgcctgc ctcctgcctg atccaccggg ctccgggggt gcggggctcg
     1141 gctgtcggcg tccctccggt ttctcgtatt cgggacctgg ccggacgctg gttgacctct
     1201 gattttaccg ccgtcctgcg agcgtaccgc tcgcgtgacc cgggcacgcc aggacgggtg
     1261 gcgaatctct cgcgcccgct ggccaacccg ttctagaaat gacgttcggc accggcagtt
     1321 tgttcccctt cgccgcccgg cctaggcacc ccaccgaaac cagaggtttc ggcggggacc
     1381 ccgccgcggc ggattgcggg acagtgaccc accctcctac ggtgtccgac catgaccgtg
     1441 gtcgaggggc tcccctggct ggccgaggat ctggtccggg tcgaggaagc cctccggagc
     1501 gcggtccgca ccggcgaccc gttcctgacc gacgtcgcct cccacctcat cggggcgggc
     1561 gggaagcgga tccgtccggc cctggccctg tgcgccggct acgccgccgg cgccgacggc
     1621 ccggtctccg acgacgtcgt gaccggagcg gtggcggtgg agctggtcca cctggggtcg
     1681 ctgtaccacg acgacgtcat cgacgaggcg gccacccgcc gcggcgtgga gagcgtcaac
     1741 caccggtggt cgaacatcgt ggccatcctg gccggcgact tcctgctggc ccgggcgtcg
     1801 tctctggccg cctcgctcgg cgtcgaggtg gccgggatcc tggccgccac gatcggcgaa
     1861 ctctgtcagg gccaggtgct cgagctccag cggctctacg acgtcaaccg cgacgaggcg
     1921 gcctacttcg gctccatcgc cgggaagacg gcgtcgctca tggcgtcggc ctgccggatc
     1981 ggggccatcg tggcgggact cgaccggccg tcgatcgagg cgctcaccgc cttcggccgc
     2041 cacgtcggaa tggtgttcca gatcgtcgac gacgtcctcg acctcaccgc cagcgacgag
     2101 gagctcggca agccctcggg cctcgacctg gcggagggca tctacaccct gccggtgatc
     2161 tacgccctgc ggtcctcacc ggagctgcgg accctgctcg gccggcccct cgacccggac
     2221 ggcgtggccc agggacgggc gctgacgtgc gccgacggcg ccgtgagcaa cgccctggcc
     2281 gtcgccgagg agcacgccgc ccgggcggcc ctggcgctgg ccgaggccaa gatcgacgac
     2341 ggcgtcgccg acgccctcaa ccggctgtgc cggtcgatca tcgagcggtc ccgccgggtc
     2401 acgccggtca gccccggcgc ccgggcgagc tgacggcgcg cccgtccgct cagagctgcg
     2461 tgcggccgcg ctcggtgacg gctctgcggc ggtcctcgag ggcggcgggg tcgtagtccc
     2521 aggtccggaa ccgttcccgt tccagggcca gaccctcgcc gagggggagg gcggcgacgt
     2581 cacggtagga ccggttgagg gcggccaccg tccggaggtc tccgccggcg acgtcgccgg
     2641 ccaggcgccg ggccgccggc agcagctcct cgtgggggac cacgtggttg acgaggccga
     2701 gccggtgggc ctcggcggcg tcgatgaagt tgcccgtcag gctcatctcc cgggcccggc
     2761 ggagaccgat cgcctggggc agcagcccgg tgaggccgcc cccggggtgg aggccgacgc
     2821 gggcatgggt gtcgccgaac accgcccgct ccgaggcgac gaggaacgag cactggagca
     2881 ccagctcgag cccgccggtg atggccgggc cgttgaccgc cccgatcacc ggcgtgttca
     2941 tcccgtggag cgcccaccac ggcgaggcct tggcgtcgag gaccccggtg gacgggaacc
     3001 ccttggcccc cgcctccttc aggtcgaccc cggcgcagaa ggccgggtcg gcgccggtga
     3061 ggacgacgca gcccacatcg gggtcgtcct cggcggcgtg gagcgcttcc accagccgtt
     3121 gcatgagctc cgacgacagg gcgttgcggg cggccggccg gttcagcgtg atcgtccg
//
LOCUS       DATGJT010000308         2890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_767080, whole genome shotgun sequence.
ACCESSION   DATGJT010000308 DATGJT010000000
VERSION     DATGJT010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_767080"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VKX24_05295"
     CDS             <1..191
                     /locus_tag="VKX24_05295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HLJ07931.1"
                     /translation="NVAVDITDAFETKVAALRRHESQGTDDPAIRERMLQWATGSAAT
                     AGLGEGRLAELFWSIATG"
     gene            complement(192..2879)
                     /gene="acnA"
                     /locus_tag="VKX24_05300"
     CDS             complement(192..2879)
                     /gene="acnA"
                     /locus_tag="VKX24_05300"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012786001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HLJ07932.1"
                     /translation="MTTRPAHPDSFSTRSRLAVGDRDLEFFSLTGPGLADHDVARLPY
                     TLKVLLENLLRHEDGLAVDASDIAGLASWAAHAGRGDSSETAREIAFSPERVLMQDLT
                     GVPAVVDLAAMRDAISQLGGDPGRINPLVPVELVIDHSVIAERTGPGSFAANVDIEYE
                     RNLERYQLLAWAQRAFENFRVVPPGTGICHQVNLEYLSRVVFEREGRAYCDTLVGMDS
                     HTTMVNGLGVLGWGVGGIEAEAAMLGQPYSMLVPPVVGLRLTGEMPEGTTATDLVLTI
                     TALLRQHGVVGKFVECFGPGIAAVPVENRATIGNMSPEYGATCTVFPIDQATLSYLRF
                     TGRDERHLALVEAYAKEQGLWHEPGGDEAVYTETVELDLGTVVPSLAGPKRPQDRVSL
                     SVAAEAFADALDRAPRSAPVEAAGEGGPSEVSDGDVVIAAITSCTNTSNPQVLIGAGL
                     LAKRAVERGLRTKPWVKTSLAPGSRVVMDYLEKAGLIEPLEKLGFYLVGFGCTTCIGN
                     SGPLMPGVSEAVQAGDLSVAAVLSGNRNFEGRIHPDVRMNYLASPPLVVAYALAGKMT
                     VDLTTEPIGTASDGTPVRLAELWPSEQEIADTIRSSLGSEMFQRRYAAVFDGDDRWRA
                     IPVAEGQTFGWDPASTYVLRPPFLDDMGSGPAPVADIEGARVLAVLGDSVTTDHISPA
                     GSIGASTPAGRYLVDHGVQRADFNSYGTRRGNHEVMVRGTFANVRLRNQLAPGTEGSV
                     TVHFPDGEQTTIFEASARYQEEGVPLIVLAGKEYGSGSSRDWAAKGPALLGIKAVIVE
                     SFERIHRSNLIGMGVLPLQYRPGESTASLGLTGREVFAIRGLGELNSSVPKEVAVTAT
                     AEDGTVTEFAARVRIDTPMEAEYFRNGGILRYVLRQLAR"
BASE COUNT          409 a          997 c         1077 g          407 t
ORIGIN      
        1 ccaacgtcgc ggtcgacatc accgacgcgt tcgagaccaa ggtcgccgcc ctccggcgcc
       61 acgagagcca gggcaccgac gacccggcga tcagggagcg gatgctgcag tgggccaccg
      121 gctcggcggc cacggccggc ctgggcgagg gccgtctggc cgagctgttc tggtcgatcg
      181 cgaccggctg atcagcgggc cagctggcgg aggacgtagc gcaggatccc gccgtttcgg
      241 aagtactcgg cctccatcgg ggtgtcgatc cgcacgcggg cggcgaactc ggtgaccgtg
      301 ccgtcctcgg cggtcgccgt cacggccacc tctttcggca ccgacgagtt gagctcgccc
      361 aggccgcgga tggcgaagac ctcccggccg gtcaggccga ggctcgccgt gctctcgccc
      421 ggccggtact ggagcggcag gacccccatg ccgatgaggt tggagcggtg gatgcgctcg
      481 aagctctcga cgatcaccgc cttgatcccg aggagcgccg ggcccttcgc cgcccagtca
      541 cggctcgagc ccgacccgta ctccttgccg gccaggacga tgagggggac cccctcctcc
      601 tggtagcggg cggacgcctc gaagatcgtc gtctgctccc cgtcggggaa gtgcacggtg
      661 acactgccct cggtgcccgg ggcgagctgg ttacggagcc ggacgttggc gaaggtcccc
      721 cggaccatca cctcgtggtt gccccgccgc gtcccgtacg agttgaagtc ggcccgctgg
      781 acgccgtgat cgaccaggta ccggccggcc ggcgtggagg cgccgattga gccggccggg
      841 gagatgtggt cggtggtcac gctgtcgccg aggacggcga gcacccgcgc gccctcgatg
      901 tccgccaccg gtgcgggccc cgagcccatg tcgtccagga acggcggccg gagcacgtag
      961 gtggatgcgg ggtcccatcc gaaggtctgg ccctcggcga ccgggatggc ccgccagcgg
     1021 tcgtcgccgt cgaacacggc cgcgtagcgg cgctggaaca tctccgagcc gagcgaggag
     1081 cggatggtgt ccgcgatctc ctgctcggag ggccacagtt cggccagtcg caccggggtg
     1141 ccgtcgctcg ccgtgccgat cggctcggtc gtgaggtcga ccgtcatctt gccggccagg
     1201 gcgtaggcga cgacgagcgg aggggacgcc aggtagttca tgcggacgtc gggatggatc
     1261 cgcccctcga agttccggtt gcccgacagc acggccgcga ccgagaggtc gcccgcctgg
     1321 accgcctcgg agaccccggg catgagcggc ccggagttgc cgatgcaggt ggtgcagccg
     1381 aagccgacga ggtagaagcc gagcttctct agcggctcga tcaagcccgc cttctccagg
     1441 tagtccatga cgacccgcga gccgggggcg agggaggtct tgacccaggg cttggtccga
     1501 aggccgcgct cgacggcccg cttggcgagc aggcccgcgc cgatgagcac ctgggggttc
     1561 gaggtgttgg tgcagctcgt gatcgccgcg atgacgacgt cgccgtcgct cacctccgac
     1621 ggcccaccct cgcccgcggc ctcgaccggg gccgaccggg gggcgcggtc gagggcgtca
     1681 gcgaacgcct cggccgcgac cgagagcgag acccggtcct ggggccgctt ggggccggcc
     1741 aggctgggga ccaccgtgcc gagatcgagc tcgaccgtct cggtgtagac ggcctcgtcc
     1801 ccgccgggct cgtgccagag gccctgctcc ttcgcgtagg cctcgaccag ggcgagatgg
     1861 cgctcgtcgc ggccggtgaa gcgcaggtac gagagggtgg cctggtcgat cgggaacacg
     1921 gtgcaggtgg ccccgtactc gggggacatg ttgccgatcg tcgcccggtt ctcgaccggg
     1981 acggcggcga tcccgggccc gaagcactcg acgaacttgc cgaccacccc gtgctggcgg
     2041 agcagcgcgg tgatggtgag gacgaggtcg gtggcggtcg tgccctccgg catctccccg
     2101 gtgaggcgga ggccgacgac cgggggcacg agcatcgagt agggctgccc gagcatcgct
     2161 gcctcggcct cgatgccccc gaccccccag ccgagcaccc cgaggccgtt gaccatcgtg
     2221 gtgtgcgagt ccatcccgac cagggtgtcg cagtaggcgc gcccctcccg ctcgaacacg
     2281 acccgggaga ggtactcgag gttgacctgg tggcagatcc cggtgccggg cgggaccacc
     2341 cggaagttct cgaaggcccg ctgcgcccac gccaggagct gatagcgctc gaggttccgc
     2401 tcgtactcga tgtccacgtt ggcggcgaag gagcccgggc cggtgcgctc ggcgatcacc
     2461 gagtggtcga tgaccagctc gaccgggacg agcgggttga tccggcccgg gtcaccgccg
     2521 agctgcgaga tggcgtcgcg catcgccgcc aggtcgacga ccgcgggcac ccccgtcagg
     2581 tcctgcatga gcacccgttc ggggctgaag gcgatctccc tggcggtctc ggacgagtcg
     2641 ccccttccgg cgtgcgcggc ccatgacgcc aggccggcga tgtccgacgc gtccacggcc
     2701 agcccgtcct cgtgccgcag gaggttctcc aggagcacct tcagcgtgta ggggagccgg
     2761 gcgacgtcgt ggtcggcgag ccccggcccg gtgagcgaga agaactcgag gtcgcggtcc
     2821 ccgacagcga ggcgggagcg agtcgagaag ctgtcgggat gggcgggacg cgtggtcatg
     2881 ggctcattct
//
LOCUS       DATGJT010000309         4727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1389912, whole genome shotgun sequence.
ACCESSION   DATGJT010000309 DATGJT010000000
VERSION     DATGJT010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4727
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1389912"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /gene="msrA"
                     /locus_tag="VKX24_05305"
     CDS             <1..595
                     /gene="msrA"
                     /locus_tag="VKX24_05305"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013414481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HLJ07933.1"
                     /translation="EAALPGRSTEMPVPATHEVLGTPLRPPFPDGLEQMVVGMGCFWG
                     AEKKFWQADGVYTTAVGYAGGYTPNPGYEEVCSGRTGHTEVVLVVFDPTRTSYENMLK
                     IFWEAHDPTQGMRQGNDVGTQYRSAIYTFSDEQAAAARASRDAYNKALADAGYSEITT
                     EIAPAGPFYYAEDYHQQYLAKNPYGYCGLGGTGVSCQ"
     gene            592..2232
                     /locus_tag="VKX24_05310"
     CDS             592..2232
                     /locus_tag="VKX24_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013132328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07934.1"
                     /translation="MSLSYANGPSTQPLIGETIGENLERTAARFPDRDALISRHQNRR
                     YTYAEFNAAVDEVARGLLAMGFEAGDRVGIWSPNCAEWVLVQYATAKIGVILVNINPA
                     YRTSELSYALDQSGCRMLIAARSFKTSDYAAMIEEVRPDLKALETVILLGSPEWDGMI
                     ASAATMPDEALRERMAGLQFDDAINIQYTSGTTGFPKGATLSHHNILNNGYFIGEACR
                     YTEADRVCIPVPFYHCFGMVLGNLACTTHGAAIVIPEAGFEPVPTLRAVAEERCTSLY
                     GVPTMFIAELECPEFESFDLSSLRTGIMAGSPCPVEVMKQVVSRMHMEDVTIAYGMTE
                     TSPVSTQTTPDDSLEHRVSTVGRVHPHVEVKITDPETGRVVPRGAAGELCTRGYSVMT
                     GYWNDPERTAEAIDRSGWMHTGDLATMDEDGYVNIVGRIKDMIIRGGENIYPREIEEF
                     LYTHPDVSDVQVIGVPDVKYGEELMAWVKVREGATLTEDALKEYCKGKIAHYKVPRYV
                     KFATDFPMTVTGKIQKFKMREQAVAELGLEAAAGMKTA"
     gene            complement(2249..3226)
                     /locus_tag="VKX24_05315"
     CDS             complement(2249..3226)
                     /locus_tag="VKX24_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07935.1"
                     /translation="MRRRGLAVLCLVMVAPAAGGGCRGSGGGPERAAGPRAISASAST
                     APAAPAEPGAVTVRAHEYGFDMPAEVEGGVVRLTLRNDGRLKHEAVVVGAGDTPLDRV
                     EADLTPVVTGRGTPTAPYLHFRGGVSLVPPGGAATSTLTLPPGRYVLVCSLTDADSTD
                     AADRGPKAAAERFHYDLGMATPFTVQTANAAAMPPSDGVLVARDYAFDVPPLTPGAKT
                     LTLRNDGRQDHTVAVSEWADGVDAATAKASFDALLAATPDKPPPDDVVVPDDVAFAGP
                     LSAGGQTTFTMEFKSGRTYVFACYMSDRSGGPLHAGGKGMVAYATVPAG"
     gene            complement(3247..>4727)
                     /locus_tag="VKX24_05320"
     CDS             complement(3247..>4727)
                     /locus_tag="VKX24_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013117053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLJ07936.1"
                     /translation="YPIDRGAVALLPEAMARRLLALPITWADDRLVVAMADPGNVLAV
                     DDLRAVTGAEIQVAVATRTQLAEAIDRFHRLDAEVDEVAQIAAEELAEDDDAAVAREG
                     VEDAPIVKFVNLLIAQAVADRASDIHVEPTETDLRIRFRVDGVLHEVMHSPRSIQGGV
                     ISRLKVMADINIAERRIPQDGRISLNVAGKGIDLRVATLPTVYGEKVVMRILDKTQAR
                     LTLTDLGFHPAVLPRFEACFRKPYGTILVTGPTGSGKSTTLYATLNVINSPDRNVITV
                     EDPVEYRLPGVNQVQVNPKAGLTFASALRSILRSDPDIVLVGEIRDRETATIAIEASL
                     TGHLVLSTLHTNDAASTPMRLVEMGVEPFLVISALDCVVAQRLARKLCDRCREEYEPT
                     HAELTEAGWPSALLKAEGPPLLYRAVGCAACSRTGYRGRLAVHEVMVMSEEIRRQVVE
                     RYSSDDIKKTALSQGMLTLREDGLVKVAQGKTTLEELFRVIA"
BASE COUNT          727 a         1683 c         1671 g          646 t
ORIGIN      
        1 ggaggcggcg ctccccggtc ggagtacgga gatgccggtg ccggccaccc acgaagtgct
       61 cggcacgccg ctgcgaccgc ccttcccgga cgggctcgag cagatggtcg tcggcatggg
      121 ctgcttctgg ggggcggaga agaagttctg gcaggcggac ggcgtgtaca ccaccgctgt
      181 cgggtacgcc ggcgggtaca cgccgaaccc cggctacgag gaggtctgct ccgggcggac
      241 gggccacacc gaggtcgtgc tcgtcgtgtt cgacccgacg cggaccagct acgagaacat
      301 gctgaagatc ttctgggagg cccacgaccc gactcagggg atgcgccagg gcaacgacgt
      361 cggcacccag taccggtcgg cgatctacac cttctccgac gagcaggccg ccgccgcccg
      421 ggcgtcgcgc gacgcctaca acaaggcgct ggccgacgcc ggctacagcg agatcacgac
      481 cgagatcgcc ccggccgggc ccttctacta cgccgaggac taccaccagc agtacctggc
      541 caagaacccc tacggctact gcggcctcgg aggaacagga gtcagctgcc aatgagcttg
      601 agctacgcca acggcccgtc cacccagcct ctgatcggcg agaccatcgg ggagaacctg
      661 gagcgcaccg ccgcccgctt ccccgaccgc gacgccctga tctcccggca ccagaaccgg
      721 cgctacacct acgccgagtt caacgccgcc gtcgacgagg tggcccgggg gctgctggcc
      781 atgggcttcg aggccggcga ccgggtcggc atctggagcc cgaactgcgc cgaatgggtg
      841 ctggtccagt acgccacggc caagatcggg gtgattctgg tcaacatcaa cccggcctac
      901 cggacgtcgg agctgtccta cgccctcgac cagtccggct gccggatgct catcgccgcc
      961 cgctccttca agaccagcga ctacgcggcg atgatcgagg aggtccgccc cgacctcaag
     1021 gcgctcgaga ccgtcatcct gctcggctcc ccggagtggg acggcatgat cgccagcgcc
     1081 gccacgatgc ccgacgaggc gctgcgggag cgcatggccg gcctgcagtt cgacgacgcc
     1141 atcaacatcc agtacacgag cggcacgacc gggttcccca agggcgccac gctgtcgcac
     1201 cacaacatct tgaacaacgg ctacttcatc ggcgaggcct gccgctacac cgaggccgac
     1261 cgggtctgca tcccggtccc cttctaccac tgcttcggca tggtcctcgg gaacctggcc
     1321 tgcaccaccc acggcgccgc catcgtcatc cccgaagccg gcttcgagcc cgtcccgacg
     1381 ctgcgggccg tggccgagga gcgctgcacc agcctctacg gcgtgccgac gatgttcatc
     1441 gccgagctcg agtgccccga gttcgagagc ttcgacctct cctcgctgcg gacgggcatc
     1501 atggccggct cgccctgccc ggtggaggtc atgaagcagg tcgtctcccg catgcacatg
     1561 gaggacgtca ccatcgccta cggcatgacc gagacctccc cggtgtcgac ccagacgacg
     1621 cccgacgaca gcctggagca ccgggtgtcg acggtggggc gggtccaccc ccacgtcgag
     1681 gtgaagatca ccgatcccga gacgggccgg gtcgtccccc ggggggcggc cggcgagctc
     1741 tgcacccggg gctactcggt gatgacgggg tactggaacg acccggagcg caccgccgag
     1801 gccatcgacc ggtcgggctg gatgcacacc ggcgacctgg ccaccatgga cgaggacggc
     1861 tacgtcaaca tcgtcggccg catcaaggac atgatcatcc ggggcgggga gaacatctac
     1921 ccccgggaga tcgaggagtt cctctacacc caccccgacg tgagcgacgt ccaggtgatc
     1981 ggcgtccccg acgtcaagta cggcgaggag ctgatggcct gggtcaaggt ccgggagggc
     2041 gccaccctga ccgaggacgc cctgaaggag tactgcaagg gcaagatcgc ccactacaag
     2101 gtcccgcgct acgtgaagtt cgccaccgac ttcccgatga cggtcaccgg gaagatccag
     2161 aagttcaaga tgcgggagca ggccgtggcc gagctcgggc tcgaggccgc ggccggcatg
     2221 aagacggcgt aaccgacagc cgctccagtt agccggcggg gacggtggcg taggccacca
     2281 tccccttccc gccggcgtgg agcgggccgc cggaccggtc ggacatgtag caggcgaaca
     2341 cgtacgtccg gccggacttg aactccatgg tgaacgtggt ctgcccgccg gcgctcaacg
     2401 ggccggcgaa ggccacgtcg tcggggacga cgacgtcgtc gggcgggggt ttgtccggcg
     2461 tcgccgccag cagggcgtcg aacgacgcct tggccgtggc ggcgtcgacg ccgtcggccc
     2521 actccgacac cgccacggtg tggtcctgcc gcccgtcgtt gcgcaacgtc agcgtcttcg
     2581 cgcccggcgt cagcggcgga acgtcgaagg cgtagtcccg ggcgacgagg acgccgtcgg
     2641 acggcggcat ggccgcggcg ttcgccgtct ggaccgtgaa cggcgtggcc atgccgaggt
     2701 cgtagtggaa ccgctcggcg gcggccttcg ggccccggtc ggcggcgtcg gtgctgtcgg
     2761 cgtcggtgag gctgcagacg aggacgtacc gccccggcgg cagcgtcagc gtcgacgtcg
     2821 ccgcgccgcc cggcgggacg agcgacaccc cgccccggaa gtgcaggtag ggggccgtcg
     2881 gcgtgccccg gccggtcacc accggcgtga ggtcggcctc gacccggtcc agcggcgtgt
     2941 cgccggcgcc gacgacgacc gcctcgtgct tgagccgccc gtcgttgcgg agcgtgaggc
     3001 gcacgacgcc gccctcgacc tcggccggca tgtcgaagcc gtactcgtgg gcccgcaccg
     3061 tgacggcacc cggctccgcc ggggcggcgg gggcggtcga cgccgacgcc gagatcgccc
     3121 gcggtccagc cgcccgttcc gggccgccgc cgctcccgcg gcagccgccg cccgccgccg
     3181 gcgccaccat caccaggcag agaacggcga ggccccgacg tcgcacggac ggcgaggcta
     3241 acccgctcag gcgatgacgc ggaagagttc ctcgagcgtc gtcttgccct gggccacctt
     3301 gaccagcccg tcctcccgga gggtcagcat cccctgggac agcgccgtct tcttgatgtc
     3361 gtcggacgag tagcgctcca ccacctggcg gcggatctcc tcgctcatca ccatcacctc
     3421 gtggacggcg agacgccccc ggtacccggt gcgggagcag gcggcgcagc ccaccgcccg
     3481 gtagagcagc ggcggcccct cggccttgag cagcgccgac ggccagccgg cctcggtcag
     3541 ctcggcgtgc gtcggctcgt actcctcccg gcagcggtcg cagagcttgc gggccaggcg
     3601 ctgggccacc acgcagtcga gggccgagat gaccaggaac ggctcgacgc ccatctccac
     3661 cagccgcatc ggcgtggagg cggcgtcgtt ggtgtgcagc gtcgacagca cgaggtggcc
     3721 ggtcagcgag gcctcgatgg cgatggtggc ggtctcccgg tcccggatct cgccgacgag
     3781 gacgatgtcg gggtcggacc gcaagatcga gcgcagcgcc gaggcgaacg tcaggccggc
     3841 cttggggttc acctggacct ggttgacgcc ggggagccgg tactcgaccg ggtcctccac
     3901 ggtgatgacg ttccggtccg gagagttgat cacgttgagg gtggcgtaga gggtggtcga
     3961 cttccccgac cccgtcggcc ccgtgacgag gatcgtcccg tagggcttgc ggaagcaggc
     4021 ctcgaagcgg ggcaggaccg cggggtggaa cccgaggtcg gtcagcgtca ggcgggcctg
     4081 ggtcttgtcc aggatccgca tgacgacctt ctccccgtag accgtcggca gcgtggccac
     4141 ccgcaggtcg atccccttgc cggcgacgtt gagggagatc cgcccgtcct gggggatgcg
     4201 gcgctcggcg atgttgatgt cggccatgac cttgagccgg ctgatcaccc cgccctggat
     4261 cgaccggggg gagtgcatga cctcgtggag gacgccgtcc acccggaagc ggatccgcag
     4321 gtcggtctcg gtcggctcga cgtggatgtc ggacgcccgg tcggccacgg cctgggcgat
     4381 caggaggttc acgaacttga cgatcggggc gtcctcgacg ccctctcggg ccaccgccgc
     4441 gtcgtcgtcc tcggccagct cctcggcggc gatctgggcc acctcgtcga cctcggcgtc
     4501 gagccggtgg aaccggtcga tggcctcggc cagctgggtg cgggtggcca ccgcgacctg
     4561 gatctcggcg ccggtcaccg cccgcaggtc atcgacggcc aggacgttgc cggggtcggc
     4621 catggccacc acgaggcgat cgtcggccca ggtgatcggc agcgccagga ggcggcgggc
     4681 catggcctcg gggaggaggg cgacggcccc ccggtcgatc gggtact
//
LOCUS       DATGJT010000310         2442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_353397, whole genome shotgun sequence.
ACCESSION   DATGJT010000310 DATGJT010000000
VERSION     DATGJT010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353397"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VKX24_05325"
     CDS             complement(<1..635)
                     /locus_tag="VKX24_05325"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ07937.1"
                     /translation="MATGDIDAVIAGRTVPGLFAATVGARTDEVALRWRPPGAETATA
                     SLTWAEYADRACRVAAGLRALGVRPGQRIVLMMRNRPEFHYADMGALLAGATPISIYN
                     SSSPEQIEYLAGHSEAAAAIVGDVGLLERFLKVRSDLPDLEKLILVDDPDGLAPSEVV
                     PFGDLLGAAPVDLDPAAAAAEPEDLLTLIYTSGTTGPPKGVMITHRNLCWVV"
     gene            complement(845..1093)
                     /locus_tag="VKX24_05330"
     CDS             complement(845..1093)
                     /locus_tag="VKX24_05330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit epsilon"
                     /protein_id="HLJ07938.1"
                     /translation="MARHLAGVPSGASPQEVAAIVAALAAIDADDRARAAALAGGAAG
                     DDQGIDAWVRGARLSNRGGGYTRGPWRLAGRLPRRKRA"
     gene            complement(1093..>2442)
                     /locus_tag="VKX24_05335"
     CDS             complement(1093..>2442)
                     /locus_tag="VKX24_05335"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011957995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HLJ07939.1"
                     /translation="KKRPWGDAVVTGHGTIDGRTVFVFSQDFTVFGGALGEVFAEKIH
                     KVMDLAESVGAPFVGLNDGAGARIQEGVVSLAAYGGIFYRNVKASGVIPQISVIMGPC
                     AGGAVYSPAMTDFIFMVRGTSHMFITGPDVVKAVTGEDVTQEELGGAMTHASKSGVAS
                     FVYEDEKQCLEEVRYLLSFLPSNNLEDPPFVAPDDDPERRCPGLVDLIPDSPNKPYDI
                     KKVIAEVVDDGEFLEVFTHWAGNIVTGFARIDGHAVGIVGNQPQVLAGTLDIDASEKG
                     ARFVRTCDAFNIPLVTFVDVPGFLPGTDQEYGGIIRHGAKLLYAYCEASVPRVQVITR
                     KAYGGAYVVMNSKSIGADLAFAWPSAEIAVMGPQGAVNIIFRKELEAADDPETRRAEL
                     VEEYTERFANPYVAAERGYVDDVIDPAETRAVLCRALAMLRTKQEKLPQRKHGNVPL"
BASE COUNT          342 a          847 c          899 g          354 t
ORIGIN      
        1 accacccagc agaggtttcg gtgggtgatc atcacgccct tgggcggccc ggtcgtcccc
       61 gacgtataga tgagcgtcag caggtcctcg ggctcggccg ccgccgccgc cgggtcgaga
      121 tcgaccgggg ccgcgccgag gaggtcgccg aaggggacga cctcggacgg cgccagcccg
      181 tccggatcgt cgacgaggat cagcttctcc agatcgggca ggtcggaccg gaccttgagg
      241 aagcgctcca gcaggccgac gtcgccgacg atggcggcgg cggcctccga gtgcccggcc
      301 aggtactcga tctgctccgg cgaggaggag ttgtagatcg agatcggcgt cgccccggcc
      361 agcagggccc ccatgtcggc gtagtggaac tccggccggt tccgcatcat gaggacgatc
      421 cgctggcccg gccgcacgcc cagggcccgg agtccggcgg ccacccggca ggcccggtcg
      481 gcgtactcgg cccaggtcag ggacgccgtg gcggtctccg cccccggcgg ccgccagcgc
      541 agcgcgacct cgtcggtccg ggcgccgacg gtggcggcga agagccccgg aacggtgcga
      601 cctgcgatga cggcgtcgat atcccctgtg gccaccggcc cgctccccct tctggtcaag
      661 cccgacgtgt cggtgatcga gcgtaggtca gggaggcggg atcgtcatcc ccagggttgt
      721 ccacagggct ctggaaaacc gcccgggatc cgcgtgatac tgaggcgccc gtcccgagga
      781 gaacgttggg gcgcccaacg cccgggcttc tctactcaac tgccctcggg gcgggttcgc
      841 cgcgtcaggc ccgcttccgc cgggggaggc gccccgccag ccgccagggg ccccgggtgt
      901 acccgccgcc ccggttcgac aggcgcgcgc cgcggaccca ggcatcgatg ccctggtcgt
      961 cgccggccgc cccgccggcg agcgccgccg cccgggcccg gtcgtcggcg tcgatggccg
     1021 ccagcgcggc cacgatcgcc gccacctctt gcggggaggc gccggagggg acgccggcca
     1081 gatgccgggc cactacagcg ggacgtttcc gtgcttgcgc tgcggcagct tctcctgctt
     1141 ggtccgcagc atggccagcg cccggcacag cacggcccgg gtctcggcgg ggtcgatgac
     1201 gtcgtcgacg tagccccgct cggcggccac gtagggattg gcgaagcgct cggtgtactc
     1261 ctcgacgagc tccgcccgac gggtctcggg gtcgtcggcc gcctccagct ccttgcggaa
     1321 gatgatgttg accgccccct gcgggcccat cacggcgatc tcggccgacg gccaggcgaa
     1381 ggccaggtcg gcgccgatcg acttcgagtt catgacgacg taggcgccgc cgtaggcctt
     1441 gcgggtgatg acctgcaccc gggggacgct ggcctcgcag taggcgtaga gcagcttggc
     1501 gccgtggcgg atgatgccgc cgtactcctg gtcggtgccg ggcaggaagc cgggcacgtc
     1561 gacgaaggtc accagcggga tgttgaaggc gtcgcacgtc cgcacgaagc gggcgccctt
     1621 ctccgaggcg tcgatgtcga gcgtgccggc cagcacctgc ggctggttgc cgacgatgcc
     1681 gacggcgtgg ccgtcgatcc gggcgaagcc ggtgacgatg ttgccggccc agtgggtgaa
     1741 gacctcgagg aactcgccgt cgtcgacgac ctccgcgatg accttcttga tgtcgtaggg
     1801 cttgttgggg gagtcgggga tgaggtcgac cagccccggg cagcgccgct cggggtcgtc
     1861 gtcgggggcg acgaagggcg ggtcctccag gttgttggac ggcaggaacg acaggaggta
     1921 gcggacctcc tccaggcact gcttctcgtc ctcgtagacg aagctggcga cccccgactt
     1981 ggaggcgtgg gtcatggcgc cgccgagctc ctcctgggtc acgtcctcgc cggtcacggc
     2041 cttcaccacg tcggggccgg tgatgaacat gtgcgacgtg ccccggacca tgaagatgaa
     2101 gtcggtcatg gccggcgagt agaccgcgcc gccggcgcag ggccccatga tcacgctgat
     2161 ctgggggatg accccggagg ccttgacgtt gcggtagaag atcccgccgt aggcggcgag
     2221 ggagacgacg ccctcctgga tccgggcgcc ggcgccgtcg ttgaggccca cgaacggcgc
     2281 cccgaccgac tcggcgagat ccatcacctt gtggatcttc tcggcgaaga cctccccgag
     2341 cgccccgccg aagacggtga agtcctggga gaagacgaag acggtgcggc cgtcgatcgt
     2401 cccgtggccg gtgacgaccg cgtcgcccca gggccgtttt tt
//
LOCUS       DATGJT010000311         3617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_249291, whole genome shotgun sequence.
ACCESSION   DATGJT010000311 DATGJT010000000
VERSION     DATGJT010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249291"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..643
                     /locus_tag="VKX24_05340"
     CDS             <1..643
                     /locus_tag="VKX24_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014141686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLJ07940.1"
                     /translation="LDKAVAAGVTNCYLNSGQTCTALTRMLVPRDRLADAERIAAAKA
                     QSYRVGDPLAEGTNLGPVISAAQRDRVRGYIEQGIAEGAKLVTGGPEAPEGLERGYFV
                     RPTVFSEVRPDMTIAQEEIFGPVLVIMPYDSEDEAVEIANGTIYGLAGGVWSGDPAHA
                     EQVARRLRTGQVDINGGRFNPLAPFGGYKQSGVGRENGRLGFEEFLETKSLQR"
     gene            complement(654..>3617)
                     /locus_tag="VKX24_05345"
     CDS             complement(654..>3617)
                     /locus_tag="VKX24_05345"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ07941.1"
                     /translation="VAGSMTRAEALGPERWATLMDRFFSAAAEAVAQAGGTVDKFTGD
                     GIMAVFGAPVAQEDHARRACLAALRLVAVAADLDLPLRVGIHSGEVVAGDVGAGRWGE
                     RTALGHAVGLAQRMESLADAGGVCLSDRTAELVAGHFRLRDGGLHDVKGASRPVRVFD
                     LVGPQFRPAGVVRTAAPLVGRQAEFGALEDALHRAEAGDAQVVGVVGEAGVGKSRLSE
                     EFAAACSAEGITVRRGAGLSHARDVPLLPVLHLLRDAFGVAETDGPAAAREKIAGSVV
                     KLDPELVDGLPVLFDFLEVPDPERPSRLAPEGRQRQVFAVLRRVTQRRSEREVLVLLL
                     EDLHWFDAASLTFLDELIPTFPGTRTLVLANFRPEFQAPWMAHSYYRQLSLAPLASAA
                     VDTLTAALVGRDPSLATLPAELRARTGGNPFFLEEVVRSLVEDGTLAGEPGAYRLARP
                     LTEARVPATVHAVLAARIDRLPAAAKQTLQTASVIGRTFPVAVLERIGGGAEDLGRLC
                     AAEFLQADGEDSYRFWHPLTQEVAYRSLLTPRRRALHAAVARALIDLDAERLDERAAL
                     IATHLAAAGEAWDAAQWEYRAGEWALRRDLGEATQRWRTVLVHLGAVEPSEQSLSLEL
                     RTRIRLLLAATWSGVVLPDRESIFTGGAALAERLSDRAELPLLYVARGLEQFAAGLVG
                     ESMEAADTALALADRQPRPDTLAITALFASDRSGYGGPPTDALRFADLAIARAGDDPD
                     LGSGFLGSSVLARARHARAEALALVGRPGDARRELDAAVELLRRRRELQFLPFVLPGY
                     VRLADLTGTDHAAGTQAAEAVRIVQETGMSGIMLITALEAEALAALAAGSFDEAAQRC
                     ALALAEARERRTGLFLEAVLLAHLARARLGLGDQTGARAVAAEAIEVAHRQGAPVVEV
                     YARLVRGRVDASPAELHAALTLAGELGAAAYEPFCLEALARLDKDDAGLAGAAARFAA
                     VGATGHARRLQAELA"
BASE COUNT          484 a         1338 c         1388 g          407 t
ORIGIN      
        1 cctcgacaag gccgtcgccg ccggcgtcac caactgctac ctgaactccg gccagacgtg
       61 caccgcgctg acccgcatgc tggtcccccg cgaccggctg gccgacgccg agcggatcgc
      121 cgccgccaag gcgcagtcct accgggtggg cgacccgctg gccgagggca ccaatctcgg
      181 cccggtgatc tccgccgccc agcgcgaccg ggtccggggc tacatcgagc agggcatcgc
      241 cgaaggggcg aagctggtga ccggggggcc cgaggccccc gagggcctgg agcggggcta
      301 cttcgtgcgg ccgacggtgt tctccgaggt gcggcccgac atgacgatcg cccaggagga
      361 gatcttcggc ccggtgctgg tgatcatgcc ctacgacagc gaggacgagg ccgtcgagat
      421 cgccaacggc acgatctacg ggctggccgg cggggtgtgg tcgggcgacc cggcccacgc
      481 cgagcaggtc gcccggcggc tgcggaccgg ccaggtcgac atcaacggcg gccggttcaa
      541 tccgctggcg ccgttcggcg gctacaagca gtcgggcgtc gggcgggaga acggccggct
      601 ggggttcgag gagttcctgg agacgaagtc gctgcagcgc tgaacccgac gcgctatgcc
      661 agttcggcct ggaggcggcg ggcgtgcccg gtggcgccga cggcggcgaa gcgggcggcg
      721 gcgccggcca gtccggcgtc gtccttgtcc agccgggcca gggcctcgag gcagaacggc
      781 tcgtaggccg cggcgccgag ctcgccggcc agcgtcagcg cggcgtgcag ttccgccggc
      841 gaggcgtcga cccggccgcg gaccagccgg gcgtagacct cgacgaccgg ggccccctgc
      901 cggtgggcca cctcgatcgc ctcggccgcc accgcccggg ctccggtctg gtcgccgagc
      961 ccgagacggg cccgggcgag gtgggcgagc aggacggcct cgagaaagag gccggtccgc
     1021 cgctcgcggg cctcggccag cgccagcgca cagcgttgcg ccgcctcgtc gaaggagccc
     1081 gccgccagag cggcgagcgc ttccgcctcc agcgcggtga tcagcatgat ccccgacatg
     1141 cccgtttcct ggacgatgcg gaccgcttcg gcggcttgag tcccggcggc gtggtcggtg
     1201 cccgtcaggt cggccaggcg gacgtagccc ggcaggacga agggcaggaa ttgcagctcc
     1261 cggcgtcggc ggaggagctc cacggcggcg tcgagctccc gtcgggcgtc gcccggacgc
     1321 ccgacgagcg ccagcgcctc ggcccgggca tgcctggccc gggccagcac actggagccg
     1381 aggaagccgc tgccgaggtc ggggtcgtcg ccggcccggg cgatggccag atcggcgaac
     1441 cggagcgcgt cggtgggcgg cccgccgtag cccgaccggt cgctggcgaa gagggccgtg
     1501 atggccagcg tgtccggccg gggctggcgg tcggccaggg ccagagcggt gtcggccgcc
     1561 tccatgctct cgccgacgag gccggcggcg aactgctcca gaccccgggc cacgtagagc
     1621 agtgggagct cggcccggtc ggacagccgt tcggccagcg ccgcaccgcc ggtgaaaatc
     1681 gactcgcggt ccgggagcac gacccccgac caggtggcgg ccagcaggag ccggatgcgg
     1741 gtcctgagct cgaggctcaa cgactgctcg ctcggctcca cggcgccgag gtggacgaga
     1801 accgtccgcc agcgctgcgt cgcctcgccc aggtcgcggc gcaacgccca ctccccggcc
     1861 cggtattccc actgcgcggc gtcccatgct tcgccggcgg cggcgaggtg ggtggcgatc
     1921 agcgccgccc gctcgtcgag ccgctcggcg tcgaggtcga tgagcgcccg ggccaccgcg
     1981 gcgtggagcg cccggcggcg gggcgtcagc agcgatcggt aggcgacctc ctgggtgagg
     2041 gggtgccaga accggtagct gtcctcgccg tcggcctgaa ggaattctgc ggcgcacagc
     2101 cggccgaggt cctcggcccc gccgccgatc cgttccagca ccgccaccgg gaaggtgcgc
     2161 ccgatgaccg aggccgtctg cagcgtctgc ttggccgcgg ccggcagccg gtcgatgcga
     2221 gcggccagca cggcgtggac cgtcgccggc acccgggcct cggtcagcgg acgggccagc
     2281 cggtaggcac ccggttcccc ggccagcgtg ccgtcctcca ccagcgagcg gacgacctcc
     2341 tcgagaaaga acgggttccc gccggtgcgg gcccgcaact cggccggaag ggtggccagg
     2401 gacgggtcgc gcccgacgag ggcggcggtc agcgtgtcca ccgccgcgga ggccagcggg
     2461 gccagcgaca gctgccggta gtaggagtgg gccatccacg gagcctggaa ctcgggccgg
     2521 aagttggcca gcaccagcgt ccgcgtcccg gggaaggtcg ggatcagctc gtcgaggaag
     2581 gtcaggctgg cggcgtcgaa ccagtgcagg tcctccagca ggagcacgag gacctcccgc
     2641 tcgctgcgcc gctgcgtcac ccggcgcagg acggcgaaca cctgccgctg gcggccctcg
     2701 ggagcgaggc gcgagggacg ctccgggtcg gggacttcga ggaagtcgaa caggaccggc
     2761 agcccgtcca ccaactccgg gtcgagtttc acgacgctcc cggcgatctt ctcccgggcg
     2821 gcggccgggc cgtcggtctc ggccacgccg aaagcgtccc gcaggaggtg caggacgggc
     2881 agcagcggga cgtcccgggc gtgggacagc ccggcgccgc ggcggacggt gatgccctcg
     2941 gcgctgcagg cggcggcgaa ctcctcgctc aggcggctct tgccgacgcc ggcctcgccg
     3001 accacgccga cgacctgggc gtcgccggcc tccgcccggt gcagcgcgtc ctccagggcg
     3061 ccgaactcgg cctggcggcc caccagcggg gccgccgtcc gcacgacgcc ggcgggacgg
     3121 aactgcgggc cgacgaggtc gaagacccgg accgggcggc tggctccctt cacgtcgtgg
     3181 aggccgccgt cgcgcagccg gaagtgcccg gccaccagtt cggccgtccg gtcgctgagg
     3241 cagaccccgc cggcgtcggc caggctctcc atccgctgcg ccagtcccac ggcgtggccc
     3301 agggccgtcc gctcccccca ccgccccgct ccgacgtcgc cggccacgac ctcaccggaa
     3361 tggatcccca cccggagcgg gaggtcgaga tcggcggcga cagcgacgag gcgcagcgcc
     3421 gccaggcacg cccggcgggc gtggtcctcc tgggcgactg gcgccccgaa gacggccatg
     3481 atcccgtcgc cggtgaactt gtcgacggtg ccgccggcct gggcgaccgc ctcggcggcg
     3541 gcggagaaga agcggtccat gagcgtcgcc caccgctcgg ggccgagcgc ttcggcccgg
     3601 gtcatcgagc ccgccac
//
LOCUS       DATGJT010000312         2587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_664083, whole genome shotgun sequence.
ACCESSION   DATGJT010000312 DATGJT010000000
VERSION     DATGJT010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664083"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1479)
                     /locus_tag="VKX24_05350"
     CDS             complement(<1..1479)
                     /locus_tag="VKX24_05350"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HLJ07942.1"
                     /translation="MSASSAPCPSCGKAVRTGARFCGGCGATLAAACPACGVPIEDDS
                     ARFCEGCGAPLAGSATSRTAETYAAAAPAASVSPGTAGPAGPGVPQSFGAGRYEVSRF
                     LGEGGRKRVYQAYDRALDREVAVATVKTEDLDAAGLERVRREAQAMGRLGDHPHIVTV
                     YDIGDEDGRPFIVSQYMPGGSVDDLLVEAPEHRLPVADAVRIADEVCQALEHAHALGI
                     VHRDIKPANIWLTEGGSTRLGDFGLAAAAVSNSRSRLTKEGMMVGTVAYMAPEQALGQ
                     DVDARADLYSLGALLYELLTGRPPFVGPDAVAVISQQINTPPMAPWWHNPAVPKELGS
                     LVLELLAKTPEERPTDAGEIRRRLAETMAKAGPEAEVPPPEVPTPAATRHTARLNRLS
                     RFVGRADELRDLKRAVEGALAGRGGLVMVSGEPGIGKTRLAEEAGVYARLGGAQVLVG
                     RSYEAESSVSYMPFSEALRSYVVNRPAEAVREELGDAASEVAK"
     gene            1806..2444
                     /locus_tag="VKX24_05355"
     CDS             1806..2444
                     /locus_tag="VKX24_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012932090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HLJ07943.1"
                     /translation="MLSDGDRNGLLKLGGVRRFTRGEHLMHQGEPGDCILILLAGHAK
                     ASCVDARGSEMVLSFRGPGDVLGELTFSHAEPRSSDVIAIEPVEARAIAASEFRGYLE
                     QRPTAALTLIDVISRRFQDANHKRVQFGQLDTLGRIAARLVELCERYGERTESGTEIR
                     LPLTQADLGSWTASSPAGVASALQTLRARGWIRTGRRHITVLDLAALEQQAE"
BASE COUNT          332 a          934 c          967 g          354 t
ORIGIN      
        1 cttggccacc tccgaggcgg cgtcgcccag ctcctcgcgg acggcctcgg ccggccggtt
       61 gaccacatag ctccgcagcg cctcgctgaa cggcatgtag gagacggagg actccgcctc
      121 gtaggaccgc ccgaccagca cctgggcgcc gcccagccgg gcgtagacgc cggcctcctc
      181 ggcgaggcgg gtcttgccga tgccgggctc gccgctgacc atgacgagcc caccccgccc
      241 ggccagggcg ccctcgacgg cccgcttgag atcgcgcagc tcgtcggccc ggcccacgaa
      301 acggctcagc cggttgagcc gggcggtgtg gcgcgtcgcc gccggcgtcg gtacctccgg
      361 gggcgggacc tcggcttcgg ggccggcctt ggccatcgtc tcggccaggc ggcggcggat
      421 ctcgccggcg tccgtcgggc gctcctccgg cgtcttggcc agcagctcca gcaccaggga
      481 gccgagctcc ttggggacgg cggggttgtg ccaccacggc gccatcggcg gtgtgttgat
      541 ctgctgggag atgacggcca cggcgtcggg gccgacgaac gggggccgtc cggtgaggag
      601 ctcgtagagc agcgcgccga gcgagtagag atcggcccgg gcgtcgacgt cctggcccag
      661 ggcctgctcg ggggccatgt aggccaccgt gccgaccatc atcccttcct ttgtgaggcg
      721 cgagcggctg ttggacacgg cggcggcggc caggccgaag tcgccgagac gggtggaccc
      781 gccctcggtc agccagatgt tggccggttt gatgtcccgg tggacgatcc cgagggcgtg
      841 ggcgtgctcc agggcctggc acacctcgtc ggcgatccgg acggcgtcgg ccaccgggag
      901 gcggtgctca ggggcctcga cgagcaggtc gtcgaccgag ccgcccggca tgtactggct
      961 gacgatgaac ggccggccgt cctcgtcgcc gatgtcgtag accgtgacga tgtggggatg
     1021 gtcgcccagg cggcccatgg cctgggcctc ccgccgcacc cgctccaggc cggcggcgtc
     1081 gaggtcctcg gtcttgacgg tggccacggc cacctcacgg tccagggccc ggtcgtaggc
     1141 ctggtagacc cgcttgcggc ctccctcacc gagaaagcgg ctgacctcgt accggccggc
     1201 gccgaaggac tgggggacgc cggggccggc ggggccggcc gttccggggg acaccgaggc
     1261 cgccggcgcg gccgctgcgt acgtctcggc cgtccgggac gtggccgagc cggccagcgg
     1321 ggcgccgcaa ccctcgcaga agcgggccga gtcgtcctcg atcgggaccc cgcaggcggg
     1381 gcacgccgcc gccagcgtgg cgccgcagcc gccgcagaag cgggctcccg tccgcaccgc
     1441 cttgccgcac gacgggcagg gcgcgctgct ggcgctcacg agtccctccc tcccggcccg
     1501 ccggtcgcac ccgtgaggaa ccttaacagc gcgcttaccg tccgacaccc cagttctggg
     1561 tactgctccc gtcctcccaa aactggcttc tcggggttcc gcgagggtcg tacggtcggc
     1621 cgatggcgtc gaggcccacc atccggtgcc cggtctgtga cgtgagagtc agcgccacgg
     1681 cccggttctg ccgccggtgc ggcgcccgcc tgccggccca accggtcggt ggatcccgca
     1741 acggggggag gagttagcat cagggagtgg cgggcgcgcg ccctgagcca ggaagcttcc
     1801 tggcgttgct ctcggacggt gaccgcaacg ggttgctgaa gctcggcggg gtccggcggt
     1861 tcacccgcgg cgagcacctg atgcaccagg gtgaacccgg ggattgcatc ctgatcctcc
     1921 tggccggcca cgctaaggcc agctgcgtcg atgcccgcgg gtcggagatg gtcctcagct
     1981 tccgagggcc gggtgacgtc ctcggtgagt tgacgttcag tcacgccgag ccgcgctcga
     2041 gcgacgtgat cgccatcgag cccgtcgagg cccgggccat cgccgcctcg gagttccggg
     2101 gctatctgga gcagcggccg acggcggcgc tgacgttgat cgacgtgatc agccggcgct
     2161 tccaggacgc caaccacaag cgcgtccagt tcggccagct cgacacgctc ggccggatcg
     2221 ccgcccggct ggtcgagctg tgcgagcgct acggcgagcg aaccgagtcg gggaccgaga
     2281 tccgcctccc gctcacccag gccgacctcg ggagctggac ggcgtcctcg cccgccgggg
     2341 tcgccagcgc cttgcagacg ctgcgggcgc ggggttggat ccggaccggg cgtcgacaca
     2401 tcaccgtgct ggacctcgcc gcactcgagc agcaggccga gtgacggcga ggcgctgtcc
     2461 ggagtgcggg catcgggtct cgggcacggc gcggttctgc gagcagtgcg gggcggcact
     2521 gagcccgcac gcccagccgc tgcgggcgcc gagggcgctc gaagccaaga tcctcgatca
     2581 gcgccag
//
LOCUS       DATGJT010000313         2168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_353584, whole genome shotgun sequence.
ACCESSION   DATGJT010000313 DATGJT010000000
VERSION     DATGJT010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353584"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1827
                     /locus_tag="VKX24_05360"
     CDS             <1..1827
                     /locus_tag="VKX24_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HLJ07944.1"
                     /translation="ATHVVKERYVQQRLIPSAMEPRGVLVVPAPFGGDYTVYSATQIP
                     HILKVMLALGLGISETDIRVIAPSVGGGFGSKLNVYAEEVLCLALARKLKKPVRWTEE
                     RTENAQATIQGRGQIQDIELAADENGKVTAVRVNLVADMGAYMQLVTPGIPLLGAFLY
                     HGVYDVPAYSFTCRSVFTTMTPTDAYRGAGRPEATYAIERAMDALARKVGVDPAELRR
                     RNFIPTEAFPYSSAPGLVFDSGNYDGALDKALEMAGYEGLRKEQQMRRESGSKKHLGI
                     GLSSYCEMCGLAPSRVLAALKYGAGGWEAASVQLLPTGKVQVTTGTSPHGQSHETCWS
                     QIVADRLGISPDDVDVLHSDTAISPLGMDTYGSRSLAVGGTAVALATDKVIDKARTIA
                     AHQLEVSETDLDFAGGVFSVKGSSEKAMPIQAIAFASFTGHNLPDGMEPNLRAEASYD
                     PPNFVFPFGTHVCVVEVDEETGQVDLLRYVAVDDCGNQINPMIVEGQIHGGVVQGVAQ
                     ALFEEASYDEDGNLLSSTLADYLVPSAAEMPSFELGSQVTPSPTNPLGVKGIGEAGTI
                     ASTPAVINAIVDALAPLGVTDVRMPASPQRVWQTIQEAKGAK"
     gene            1824..>2168
                     /locus_tag="VKX24_05365"
     CDS             1824..>2168
                     /locus_tag="VKX24_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009949520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HLJ07945.1"
                     /translation="MIPAAFDYVRAASAKEAVSLLSQHGDDAKLLAGGHSLIPLMKLR
                     LASPAVLIDVARIGDLSYVRDGGDHVAIGALTRHHDVEHSDLLRTEVPILAHVAGLVG
                     DPQVRHRGTIGGS"
BASE COUNT          335 a          815 c          721 g          297 t
ORIGIN      
        1 gccacccacg tggtcaagga gcgctacgtc cagcagcggc tgatcccctc ggccatggag
       61 ccccggggcg tgctcgtcgt cccggcgccc ttcggcggcg actacaccgt ctactcggcg
      121 acccagatcc cccacatcct caaggtgatg ctggcgctcg gcctcggcat ctccgagacc
      181 gacatccggg tgatcgcccc ctcggtcggc ggcggcttcg gctccaagct caacgtctac
      241 gccgaggagg tcctctgcct ggcgctggcc cggaagctga agaagcccgt ccggtggacc
      301 gaggagcgga cggagaacgc ccaggccacc atccagggcc ggggccagat ccaggacatc
      361 gagctggccg ccgacgagaa cggcaaggtc accgcggtgc gggtcaacct cgtggccgac
      421 atgggcgcct acatgcagct ggtgacgccg ggcatcccgc tgctcggagc gttcctctac
      481 cacggcgtct acgacgtgcc ggcctactcc ttcacctgcc ggtcggtctt caccaccatg
      541 acgccgaccg acgcctaccg gggcgccggc cgcccggagg ccacctacgc catcgagcgg
      601 gcgatggacg ccctggcccg caaggtcggc gtcgacccgg ccgagctccg ccgccgcaac
      661 ttcatcccca ccgaggcctt cccctacagc tccgcccccg gcctcgtctt cgacagcggc
      721 aactacgacg gcgccctcga caaggcgctg gagatggccg gctacgaggg gctccgcaag
      781 gagcagcaga tgcgccggga gtcggggtcg aagaagcacc tcggcatcgg gctgtcgagc
      841 tactgcgaga tgtgcggcct ggccccgagc cgggtcctgg ccgccctcaa atacggcgcc
      901 ggcggatggg aggcggccag cgtgcagctg ctcccgaccg gcaaggtcca ggtgaccacc
      961 ggcacgtcac cccacggcca gtcccacgag acctgctggt cgcagatcgt ggccgaccgg
     1021 ctcgggatca gccccgacga cgtcgacgtc ctccactccg acaccgccat ctcgccgctc
     1081 gggatggaca cctacggctc ccggtcgctg gccgtgggcg gtacggcggt ggcgctggcc
     1141 accgacaagg tcatcgacaa ggcccgcacc atcgccgccc atcagctcga ggtctccgag
     1201 accgacctcg acttcgccgg cggggtgttc tcggtcaagg gctcgtcgga gaaggcgatg
     1261 ccgatccagg cgatcgcctt cgcctccttc accggccaca acctgcccga cggcatggag
     1321 cccaacctcc gggccgaggc gtcctacgac ccgcccaact tcgtcttccc cttcggcacc
     1381 cacgtctgcg tggtggaggt cgacgaggag acgggccagg tcgacctgct gcgctacgtg
     1441 gcggtcgacg actgcggcaa ccagatcaac ccgatgatcg tggagggcca gatccacggc
     1501 ggcgtcgtcc agggcgtggc ccaggcgctg ttcgaggagg cgtcctacga cgaggacggc
     1561 aacctgctga gctcgacgct ggccgactac ctcgtgccct cggcggcgga gatgccgagc
     1621 ttcgagctcg gttcccaggt gacgccgagc cccacgaacc ccctgggggt caagggcatc
     1681 ggcgaagcgg ggacgatcgc gtccaccccg gcggtgatca acgccatcgt cgacgccctg
     1741 gcgccgttgg gcgtgaccga cgtccgcatg ccggcctcgc cgcagcgggt gtggcagacg
     1801 atccaggaag caaagggggc caaatgatcc cggcggcgtt cgactacgtc cgtgccgcgt
     1861 cggccaagga ggcggtgtcg ctgctgtccc agcacggcga cgacgccaag ctcctggccg
     1921 gcggccactc gctcatcccg ctgatgaagc tccggctggc gtcgccggcg gtgctgatcg
     1981 acgtggcccg catcggcgac ctgtcctacg tccgcgacgg cggcgaccac gtcgccatcg
     2041 gggcgctcac ccgccaccac gacgtcgagc actccgacct gctccggacc gaggtgccga
     2101 tcctggccca cgtcgccggc ctcgtcggcg acccccaggt ccgccaccgg ggcacgatcg
     2161 gcgggtcg
//
LOCUS       DATGJT010000314         4190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_41757, whole genome shotgun sequence.
ACCESSION   DATGJT010000314 DATGJT010000000
VERSION     DATGJT010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4190
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41757"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VKX24_05370"
     CDS             complement(<1..628)
                     /locus_tag="VKX24_05370"
                     /inference="COORDINATES: protein motif:HMM:TIGR03083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylpyruvate isomerase family
                     mycothiol-dependent enzyme"
                     /protein_id="HLJ07946.1"
                     /translation="MEISDRLDAVRTNSALLARAARAAGPEVPVPGCPEWTMADLLGH
                     ISAVHRWVTEIVQTKAQERVRRSGLPQPGAGDDLVEWFEAGAAGVAAALESVDSDAPL
                     WWPWASAGPAPARCWIRRMAHETAIHRVDAESAAGGPGPVEPAELAADGIDELLELLA
                     AVPAGPDDGLAGLPASYHFHTTDVPGEWLIATGGDGRVAVRREHAKADV"
     gene            complement(640..1410)
                     /locus_tag="VKX24_05375"
     CDS             complement(640..1410)
                     /locus_tag="VKX24_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020676802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M90 family metallopeptidase"
                     /protein_id="HLJ07947.1"
                     /translation="MGFLRRRPAATLPDDWQQIVERNVAHWALLDADERARLGELMVG
                     IVEGKRWEAANGFSLTDEIRTVIAAQAALLILGLDLRWYRAVQAIVVHPSAVVSHEPR
                     PGPAGTLEEGPFTLLGLADHNYGPVLIAWDAARANARHPERGHDVVLHEFAHKLDMLD
                     DVINGTPPLHHREDGPAWHDVCTRELALLRAGYGWPLRDYGGTDPGEFFAVATEAFFD
                     LPLELEATKPELYGVLRTFYRQDPAARARRAAGGEPVL"
     gene            complement(1457..1903)
                     /locus_tag="VKX24_05380"
     CDS             complement(1457..1903)
                     /locus_tag="VKX24_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017580457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HLJ07948.1"
                     /translation="MTLQGEYVPSAAKWVRDQVEAYERSGGREANTLRDTGLPVIIVT
                     MRGNKSGSVRKIALMRVEHGGEYALVASKGGSPQHPVWYHNLKAHPDEVMIQDGPEPF
                     AVTVREITGEERATWWDRAVAAFPPYAEYQQKTDRQIPVFVATPKK"
     gene            complement(1900..2022)
                     /locus_tag="VKX24_05385"
     CDS             complement(1900..2022)
                     /locus_tag="VKX24_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012085403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein bL36"
                     /protein_id="HLJ07949.1"
                     /translation="MKVRSSLRSLKQRDGSVVVRRGGRTFVVNRRDPRWKARQG"
     gene            complement(2084..3616)
                     /locus_tag="VKX24_05390"
     CDS             complement(2084..3616)
                     /locus_tag="VKX24_05390"
                     /inference="COORDINATES: protein motif:HMM:NF026240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LAGLIDADG family homing endonuclease"
                     /protein_id="HLJ07950.1"
                     /translation="MEYRTDKRPMLADLRESGCLTGDTRLLRADDGAEVTLSELVRTG
                     VRDVPVWSVDEQWRLVPATLTHAFLSGVKPVYELRLASGRRLRATANHKFRTVAGWEP
                     LGRLVPGDRIAVPRLVPSPDTTERWPDPEVVLLAHLLGDGSMRRNQPLFYVSTDEENL
                     AAVSAAAAHFGVAARREPAKGCWRLALPAPTRLARGRRNPIVAWLDTLGVYGLRAHEK
                     FVPAPVFSLRDDQVAAFLRHLWATDGSVTLRPEDVSGPPGRVYYASTSRRLADDVRLL
                     LLRLGIQSRVKSTSKAGYRDCYQVDIYGVADQRRFCEVVGVNGQRGDACRRLLAALEG
                     RVANPNADTIPWEVRPRIVAAMARAGLSHRDLAVGVGERYCGSYLLGSGGRPRSSRRE
                     RLEAIAQVVGDKDLLALATSDVAWDRIVAIEPAGEEEVFDATVLGTHNFVANGVVAHN
                     SIEQDADVVAFIYRDDAYNPESTEKGTAEIIVAKHRNGPTAKVRLAFLEHLTKFANMA
                     RR"
     gene            complement(3505..>4190)
                     /locus_tag="VKX24_05395"
     CDS             complement(3505..>4190)
                     /locus_tag="VKX24_05395"
                     /inference="COORDINATES: protein motif:HMM:NF015736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HLJ07951.1"
                     /translation="LFERDGSMTGVPSGYVDLDEVLLGFQPSNLIVVAARPGQGKTSF
                     ALGAASHVALETRRPVVFFSMEMGYLELTQRMLASEAGVNSRLLRTGRIPESDWTKIS
                     HAVGRLAEAPFYIDDNAHLTVMEMRAKCRRLKAMHGDLGLVVVDYLQLMSTPRRSENR
                     QVEVSELSRGLRSWPGTWRPQSWPSRSSTARWSTAPTSARCSPTSGNPAASPAIPGCC
                     APTTVRKSR"
BASE COUNT          576 a         1503 c         1492 g          619 t
ORIGIN      
        1 cgacgtcggc cttggcgtgc tcccggcgca ccgcgacccg gccgtcgccg ccagtggcga
       61 tgagccattc gccggggacg tcggtggtgt ggaagtggta gctcgccggg aggccggcca
      121 gcccgtcgtc ggggcccgcc ggcactgcgg ccagcagctc gagcagctcg tcgatgccgt
      181 cggcggccag ctccgccggc tcgaccgggc cgggcccgcc ggccgccgac tcggcgtcga
      241 cccggtggat cgccgtctcg tgggccatac gccggatcca gcagcgggcc ggggccggac
      301 cggcggaggc ccacggccac cacaggggcg cgtccgagtc gaccgactcc agggcggcgg
      361 ccaccccggc cgccccggcc tcgaaccact cgacgaggtc gtcgccggcg ccgggctgcg
      421 gcagcccgga gcgccgcacg cgctcctgcg ccttggtctg cacgatctcg gtcacccagc
      481 ggtgtacggc gctgatgtgg ccgaggaggt cggccatggt ccactccggg cagccgggga
      541 ccggtacctc cggcccggcg gcgcgcgccg cccgggcgag gagcgccgag ttggtgcgga
      601 cggcgtcgag ccggtcggag atctccatgg acgccgaggc tagaggaccg gctcaccgcc
      661 cgccgctcgc cgggcccggg cggcgggatc ctggcggtag aaggtccgca gcacgccgta
      721 gagctccggc ttggtcgcct cgagttccag gggcaggtcg aagaaggcct ccgtggccac
      781 ggcgaagaac tcgccggggt cggtgccgcc gtagtcccgc agcggccagc cgtatcccgc
      841 ccgcagcagg gccagctccc gggtgcagac gtcgtgccag gccggcccgt cctcccggtg
      901 gtggagcggc ggcgtcccgt tgatcacgtc gtcgagcatg tcgagcttgt gggcgaactc
      961 gtggaggacg acgtcgtggc cccgctccgg gtgacgggcg ttggcccggg cggcgtccca
     1021 ggcgatgagg acgggcccgt agttgtggtc ggccagcccg agcagcgtga acgggccctc
     1081 ctcgagcgtg ccggccgggc cgggccgggg ctcgtgggag acgaccgccg aagggtggac
     1141 gacgatggcc tgcaccgccc ggtaccaccg gaggtcgaga ccgaggatca ggagggccgc
     1201 ctgggcggcg atcaccgtgc ggatctcgtc ggtgagcgag aagccgttgg ccgcctccca
     1261 ccgtttgccc tcgacgatcc cgaccatgag ctcccccagg cgcgcccgct cgtcggcgtc
     1321 gagcagcgcc cagtgggcca cgttccgctc gacgatctgc tgccagtcgt cgggcagcgt
     1381 ggccgccggc cggcgcctca ggaaccccat gtgtcgatcg acctcccccg acctgcaaac
     1441 gccgggggcg cggcgcctat ttcttcggcg tggccacgaa gaccgggatc tgccggtcgg
     1501 tcttctgctg gtattcggcg tagggcggaa aggcggcgac cgcccggtcc caccaggtgg
     1561 cccgctcctc gccggtgatc tcccgcacgg tgacggcgaa gggctccggc ccgtcctgga
     1621 tcatgacttc gtcggggtgg gccttgaggt tgtggtacca gacggggtgc tgcggggacc
     1681 cgcccttcga ggccacgagc gcgtactcac cgccgtgctc cacccgcatg agggcgatct
     1741 tgcggacgct gccgctcttg ttcccccgca tggtgacaat gatcaccggg aggccggtgt
     1801 cgcggagcgt gttggcctcc cggccgcccg agcgctcgta ggcctcgacc tggtcgcgca
     1861 cccacttcgc cgcgctcggt acgtactcgc cttgcagtgt catccctgcc gcgccttcca
     1921 tctcgggtcg cgccggttga cgacgaacgt gcggccgccc cgccggacca cgaccgatcc
     1981 gtcacgctgc ttcaacgacc gcagcgaact tctcaccttc atggttctca ccacctttcg
     2041 tccgcctcaa tcgtttcaac gtcctcgtat tccggggcgg cggctagcgg cgggccatgt
     2101 tggcgaactt ggtcaggtgc tccaggaagg cgaggcggac cttggccgtg gggccgttgc
     2161 ggtgcttggc cacgatgatc tcggccgtgc ccttctcggt cgactccggg ttgtaggcgt
     2221 cgtcgcggta gatgaaggcc acgacgtcgg cgtcctgctc gatcgagttg tgggccacca
     2281 cgccgttggc cacgaagttg tgggtcccga gcacggtggc gtcgaagacc tcctcttcgc
     2341 cggccggttc gatggccacg atccggtccc aggcgacgtc ggacgtcgcc agggcgagca
     2401 gatccttgtc tccgacgacc tgggcgatcg cctccaggcg ttcgcggcgg gacgaccgcg
     2461 gccggccgcc gctgccgaga aggtaactgc cgcaataccg ctcacccaca ccgaccgcca
     2521 ggtcccggtg gctgagcccc gcccgcgcca tggcggcgac gatgcgcggc cggacctccc
     2581 acgggatcgt gtcggcgttc gggttggcga cgcgaccctc gagggcggcg agaagccttc
     2641 ggcaggcatc gccccgctgg ccgttgacac cgaccacctc gcagaatcgc cgctggtcgg
     2701 ccacgccata gatgtcgacc tggtaacagt ctcggtagcc ggccttcgac gtcgacttca
     2761 cccgagactg aatgccgagc cggagcagga gcagccgtac gtcatcggcg agccgccggc
     2821 tcgtgctggc gtaatacacc cgcccgggcg gcccggagac gtcctccgga cgcaacgtca
     2881 cggaaccgtc ggtcgcccag agatgccgca ggaacgccgc cacctggtcg tctcggagcg
     2941 agaaaaccgg ggcggggacg aatttctcat gggctcgcaa cccgtagacg ccgagggtgt
     3001 cgagccaggc gacgatcggg tttcgccggc cccgggcgag cctcgtcggg gcgggcaggg
     3061 ccagacgcca gcagcccttg gccggttccc ggcgggcggc cactccgaaa tgggcggccg
     3121 ccgcgctgac ggcggcgaga ttctcttcgt cggtgctcac gtagaagagc ggctggttcc
     3181 tgcgcatgct tccgtcaccg agcaggtgcg ccagaagcac gacttcgggg tcgggccatc
     3241 gttccgtcgt atcaggcgag ggcacgaggc gaggtacggc gatgcggtct ccgggcacga
     3301 gccggccgag cggttcccac cccgcgactg tgcggaattt gtggttggcg gtggcccgga
     3361 gccgccgtcc ggaggccagg cggagctcgt agaccggctt cacgccgctc aggaaggcgt
     3421 gcgtcagcgt cgcggggacg agccgccact gctcgtcgac actccagacg gggacgtccc
     3481 ggacgccggt gcgcacgagc tcgctcagcg tgacttccgc accgtcgtcg gcgcgcagca
     3541 gcctggtatc gccggtgagg cagccggatt cccggaggtc ggcgagcatc gggcgcttgt
     3601 cggtgcggta ctccagcgag cggttgagct gcgagagggc catgactggg gtctccaggt
     3661 cccgggccag gatcttagcc cccgggagag ctcggacacc tccacctggc ggttctccga
     3721 ccggcggggc gtgctcatca gctggagata gtcgaccacg accaggccca ggtcgccgtg
     3781 catggccttg aggcgccggc acttggcccg catctccatc accgtcaggt gggcgttgtc
     3841 gtcgatgtag aacggcgcct cggccaaccg gcccacggcg tggctgatct tcgtccagtc
     3901 gctctcgggg atccgccccg tccgcagcag ccgggagttc acccccgcct cggaggccag
     3961 catccgctgg gtcagctcca ggtagcccat ctccatcgag aagaacacca ccggccggcg
     4021 cgtctccagc gccacgtgcg acgccgcccc cagggcgaag ctcgtcttgc cctgccccgg
     4081 ccgggccgcc accacgatca aattcgacgg ctggaacccc aacagcacct catcgagatc
     4141 gacatagccc gacggcaccc ccgtcatcga cccgtcccgc tcgaagagcg
//
LOCUS       DATGJT010000315         2735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_664420, whole genome shotgun sequence.
ACCESSION   DATGJT010000315 DATGJT010000000
VERSION     DATGJT010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664420"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VKX24_05400"
     CDS             <1..268
                     /locus_tag="VKX24_05400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07952.1"
                     /translation="AVGIDYGRLLPTVPGFGEAWRAVGTTARQVRQGGADPRALARAA
                     RSTRESVVPWLRSRRWGAAGSALGAATRAEAAYRRLTLAGRGRR"
     gene            265..1134
                     /locus_tag="VKX24_05405"
     CDS             265..1134
                     /locus_tag="VKX24_05405"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ07953.1"
                     /translation="MTPGYCAVVVTFRRPESLRVTLRSVMAQRHRPNFVVVADNDSGR
                     SAERIIAEETWPVPVINLPMPRNVGPAGGWGAATRYAGQRDDRGEWLLVLDDDDPIRH
                     PDVVGSLLDQVPAADVAAVGLKGATVIRPFGLLRRVHGPMGPADYLSGGGLPLYRWAA
                     LDAAGGFDESLFFGFEDLDIGLRLRARGWSLLAVDDAEQPVAGTNPRRTPWREYYKAR
                     ALVTIVRRHLGPTVTTLTLIRLGFGGARLLITDGGKVATARLLGIADGVRGRLGVRRY
                     DPQGNPPKGEPPS"
     gene            complement(1142..1801)
                     /locus_tag="VKX24_05410"
     CDS             complement(1142..1801)
                     /locus_tag="VKX24_05410"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ07954.1"
                     /translation="MPTRKLTPAYQAARLRAFGKRSAPRWVRHKIWDWEFRHGNWNYL
                     ESAIDPELFDYVTRVLHGGSLLDLGCGNGIVRCSLPPGSFRRYVGIDLSAEALRRLED
                     RAAALPPPADGQSLIVGDFSAPDVLARARGPFDVILLHDSMYYVGDAPAFLRRLPPLL
                     SPDGLVVVRIHDRFRYAPFVAAVHEALTVVDEAIGDDNRILIAARGRPAGDDERDEAS
                     R"
     gene            complement(1803..2420)
                     /locus_tag="VKX24_05415"
     CDS             complement(1803..2420)
                     /locus_tag="VKX24_05415"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HLJ07955.1"
                     /translation="MRQLAGRLRRRALASIARSRDTVDPGCVALTYDDGPDPAVTPRL
                     LDVLHRCGAPATFFVVGERAAAHADLVRRIVDDGHSIGTHSMHHRDLRRAPVAVARAE
                     LDDGRRAVESIVGRPVPLFRPPHGHLSARSALLLRPGRWQTWLWTTDGYDWKPEATCD
                     SVVELAARVGDGGIVLLHDTSESTVGAAGLLVDRLRARGLELVAL"
     gene            2478..>2735
                     /locus_tag="VKX24_05420"
     CDS             2478..>2735
                     /locus_tag="VKX24_05420"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ07956.1"
                     /translation="MPDGRSPMDLPDSSPAVSVIVPCHGALDELPDLVASLQAQDAPF
                     AWETIFVDNNLTPTERAQLEEAIRSLPRGRVVVEAAPGISPA"
BASE COUNT          387 a          966 c         1004 g          378 t
ORIGIN      
        1 ggcggtcggg attgactacg gccggctgct cccgacagtc cccggcttcg gcgaggcgtg
       61 gcgggccgtc ggcacgacgg cccgccaagt gcgacagggg ggcgccgacc cccgggcgct
      121 cgcccgtgcc gcccggtcga cgcgggagtc ggtcgtcccg tggctgcgca gccggcggtg
      181 gggggcggca ggatcggcgc tgggcgccgc cacccgggcc gaggcggcct accggcgcct
      241 gaccctcgcc ggtcgcggcc ggcgatgact cccggctact gcgccgtagt cgtgaccttc
      301 cggcggccgg agtcgttgcg tgtcactctc cgttcggtga tggcccaacg gcacaggccg
      361 aacttcgtcg tcgtcgccga caacgattcc gggcgctcgg ccgagcggat catcgcggag
      421 gagacctggc cggtccccgt gatcaacttg ccgatgccac gcaacgtggg cccggccggt
      481 gggtggggag cggcaacgcg gtacgccggt cagcgggacg accgaggaga atggctgctc
      541 gtcctcgacg acgacgaccc gatccgacat cccgacgtgg tcggaagcct gctcgaccag
      601 gtgccggccg ctgacgttgc agccgtcggc ctgaagggcg caaccgtcat ccggccgttc
      661 ggcctgctcc gccgcgtcca cgggccgatg ggtccggcgg actacctctc gggcggcggc
      721 ctcccgctct accggtgggc cgccctcgat gccgcgggcg gattcgacga atcgctcttc
      781 ttcggcttcg aggatctcga catcggccta cggttgcggg cccgagggtg gtcgctactc
      841 gctgtcgacg acgctgaaca gcccgtggca ggcaccaacc cgcggcggac gccgtggcgg
      901 gagtactaca aggcgcgggc tctcgtcacg attgtccggc gacatctcgg gccgacagtc
      961 actacgctga ctctcatccg gctcggtttc ggcggcgcga ggctgctcat caccgatggg
     1021 ggcaaggtgg ccaccgcccg cctgctggga attgccgatg gtgtccgtgg ccggctcggc
     1081 gtgcggcgct atgacccgca aggcaatccc ccgaaagggg agccccctag ctaggtccgt
     1141 ctcaccgcga tgcctcgtcc cgctcgtcgt ccccggccgg gcgaccccgg gcggcgatca
     1201 ggatccggtt gtcgtcgccg atcgcctcgt cgacgaccgt gagggcctcg tgcaccgcgg
     1261 ccacgaacgg cgcataccgg aaacgatcat ggatccggac gacgaccagc ccgtccgggg
     1321 agagcaacgg cggcaggcgc cggagaaagg cgggcgcgtc cccgacgtag tacatcgaat
     1381 cgtgcagcag gatgacgtcg aacgggcctc gcgcccgggc gaggacgtcg ggcgcggaga
     1441 agtcgcccac gatgagcgac tgcccgtcgg ccggcggcgg cagggcggcc gcccggtcct
     1501 cgagcctccg cagagcctcg gccgacaggt cgatgccgac gtagcgccgg aagctgcccg
     1561 gcggcaggct gcagcggacg atgccgttgc cgcagccgag gtcgagcagc gagccgccgt
     1621 gcaggacgcg ggtcacgtag tcgaacaact ccgggtcgat ggcgctctcg aggtagttcc
     1681 agttgccgtg cctgaactcc cagtcccaga tcttgtgccg gacccatcgg ggggcggacc
     1741 gcttcccgaa cgcccgcagc cgggcggcct gatacgccgg ggtcagcttt cgggtcggca
     1801 tgtcagaggg cgaccagttc caggccccgg gcgcgcagcc ggtcgaccag cagcccggcc
     1861 gctcccaccg tcgattccga cgtgtcgtgc aacaggacga tgccgccgtc ccccacccgg
     1921 gcggcgagct ccacgaccga gtcgcaggtc gcctcgggct tccagtcgta tccatccgtg
     1981 gtccacagcc acgtctgcca gcgacccggg cgcaggagca gcgcgctgcg ggccgacaga
     2041 tgcccgtgcg ggggacggaa cagcggcacg ggccggccga cgatggactc gaccgcccgc
     2101 cggccgtcgt cgagctcggc gcgcgccacc gctaccggcg cccgccggag gtcgcggtgg
     2161 tgcatggaat gcgtgccgat cgaatggccg tcgtcgacga tgcgccggac caggtcggca
     2221 tgggcggcgg cgcgctcccc gacgacgaag aacgtcgccg gggcgccgca ccggtggagg
     2281 acgtcgagaa gccgcggggt gaccgccggg tcgggcccgt cgtcgtaggt gagagcgacg
     2341 caaccggggt cgaccgtgtc acgcgagcga gcgatgctcg ccagcgcccg tcggcgtagg
     2401 cggcccgcga gctggcgcat caccgtcgga gcgtatcacc gggggaagtg agcacggaac
     2461 gtgctacgtt cggccggttg cccgacgggc gcagtcccat ggatctccct gacagttctc
     2521 cggctgtgtc ggtgatcgtt ccgtgtcatg gcgcgctcga cgaactgccc gacctggtcg
     2581 cttcgctgca ggctcaggat gcgccgttcg cctgggagac gatcttcgtc gacaacaacc
     2641 tgacaccgac cgagcgggca cagctcgaag aggcgatccg ttcgctgccc cgggggcggg
     2701 tggtcgtcga agcggcgccg ggcatcagcc ccgct
//
LOCUS       DATGJT010000316         4294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1179972, whole genome shotgun sequence.
ACCESSION   DATGJT010000316 DATGJT010000000
VERSION     DATGJT010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4294
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179972"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VKX24_05425"
     CDS             complement(<1..506)
                     /locus_tag="VKX24_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003846755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ07957.1"
                     /translation="MPDPPTILVVDDEQSYRDALAVSLRREGFLVQVAADGLEAIDRF
                     ETYRPALVLLDVMLPRMSGIDVCRELRAKSRVPIIMLTARDAEIDTVVGLEVGADDYV
                     TKPYRLRELVARMRAVLRRSPRDAELETISADAIEVGDVRLDPERHEVFVRGEPVSLP
                     LKEFELLE"
     gene            complement(499..1800)
                     /locus_tag="VKX24_05430"
     CDS             complement(499..1800)
                     /locus_tag="VKX24_05430"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ07958.1"
                     /translation="MDVGSSVPVIISAGVVVLLLVAGLWLRARRSLVRRLLTVGARLE
                     DHAVPMDGKGGKEAALERLERSAERGQLRVDEAKGDSVRLSAAFNHLADGVVVVDQRG
                     EVVLRNGVAEQFTGPGGDALTADAIWELLDRTLRGLEGERELRLFGPPRRVLHVRAVP
                     LDDGTRPIGGVAFLRDVSEARRIENMRRDFVANVSHELKTPIGALGLLAETMAAEEDA
                     EMLRRLAGRVLHESERLERTVEDLLDLSILEAQESPERELIAVDMLMADAAERMASTA
                     EAAGIPIELAEPAGDILVACDRRQVTSALFNLLDNAVKYSEDGGKVEFSAQVEGFSVA
                     ISVRDHGIGIPHRDLERIFERFYRVDRTRSRATGGTGLGLAIVRHVAQAHGGEVSVES
                     EEGLGSTFTLKLPLAAASRSARRTRPGRKPGITEGRSTSDA"
     gene            1875..2492
                     /locus_tag="VKX24_05435"
     CDS             1875..2492
                     /locus_tag="VKX24_05435"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HLJ07959.1"
                     /translation="MRFRLIPRDDGFFPLFDQAAANLAEGARLLRDLLDDFEDVHAKH
                     AAIKDCERKNDAVTDTILRRLDQSFVAPFDREDIHALTEQMDDVVDDIQAVSELLLLH
                     DVDEPLDEVRELGDVLVKAAEANVALIGKLSKLRGIDSELQVVDQLESEADRIYRRSV
                     AHLFSGDFNAFDVLRWKDIVEAIEESVNGLEKIGDIVEGIALKHS"
     gene            complement(2563..3414)
                     /gene="pstB"
                     /locus_tag="VKX24_05440"
     CDS             complement(2563..3414)
                     /gene="pstB"
                     /locus_tag="VKX24_05440"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015660848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HLJ07960.1"
                     /translation="MQMSTVLPPLVGTADDTTGERPGADREIVFSVADLSVHYGPTQA
                     VAGVTCDIAANEITAFIGPSGCGKSTVLRCFNRMNDLVPSARVGGSIKYKGHDVYGDG
                     VNATEVRRRIGMVFQKPNPFPKSIYDNVAFGPRLNGKKKGLDEIVERSLTSAALWDEV
                     KDKLHHSGLDLSGGQQQRLCIARAIAVEPDVILMDEPCSALDPIATARIEDLMEELKR
                     DYTIVIVTHNMQQAARVSDMTAFMSVVDQEDGTRHGGLVEFGRTEQIFTHPSDPRTEG
                     YITGRFG"
     gene            3546..4238
                     /gene="phoU"
                     /locus_tag="VKX24_05445"
     CDS             3546..4238
                     /gene="phoU"
                     /locus_tag="VKX24_05445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HLJ07961.1"
                     /translation="MNETRHAYHGQLDDLRVDVVRLGLMASDAIAAGTDAFLEADLAG
                     ADRVIHADAALDELTHSLEERCYTTLARQQPMASDLRMVVAVLRTIHELERTGDLMVN
                     VAKTTRRLYPVELPDPIRRIIEQMGRQAGVQLRLALEAFAESDCARAMALEDMDDVMD
                     DLQRELFRTIFALGRADEAGLQQMVQVALVGRYYERMADHAVNIGERVNYMVTGEVPG
                     TDGEAANGITLD"
BASE COUNT          652 a         1511 c         1502 g          629 t
ORIGIN      
        1 atctccagca gctcgaactc cttgagcggc agcgacaccg gctcgccccg cacgaacacc
       61 tcgtggcgtt ccgggtcgag gcggacgtcg ccgacctcga tggcgtcggc ggagatcgtc
      121 tccagctccg cgtcgcgcgg cgagcggcgc agcaccgccc gcatgcgggc caccagctcc
      181 cgcagccggt agggcttggt gacgtagtcg tcggcgccga cctcgaggcc gacgacggtg
      241 tcgatctcgg cgtcgcgggc ggtgagcatg atgatcggga ccctcgactt ggcccgcagc
      301 tcccggcaca cgtcgatccc cgacatgcgg ggcagcatca cgtcgaggag caccagcgcc
      361 ggccggtagg tctcgaaccg gtcgatggcc tcgaggccgt cggcggccac ctgtacgagg
      421 aagccctccc gccgcagtga gacggcgagg gcgtcgcggt agctctgctc gtcgtcgacg
      481 acgaggatgg tgggcgggtc aggcatcgga tgtcgaccta ccttctgtta tcccgggctt
      541 gcgcccgggg cgggtccggc gggcgctgcg gctggcggcg gccagcggca gcttcagggt
      601 gaacgtggag ccgaggccct cctcggactc caccgagacc tcgccgccgt gagcctgggc
      661 gacgtggcgg acgatggcca gcccgagacc ggtgccgccg gtggcccggc tgcgcgtccg
      721 gtcgacccgg tagaagcgct cgaagatccg ttccagatcg cgatggggga tcccgatgcc
      781 gtggtcccgc acggagatgg ccaccgagaa cccctcgacc tgggcgctga actcgacctt
      841 gccgccgtcc tcggagtact tgacggcgtt gtcgaggagg ttgaacaggg cgctggtgac
      901 ctggcggcgg tcgcaggcca cgaggatgtc gccggccggc tcggccagct cgatcgggat
      961 cccggcggcc tcggccgtcg aggccatgcg ctcggcggcg tcggccatca gcatgtcgac
     1021 ggcgatcagc tcccgctccg gcgactcctg ggcctcgagg atcgacaggt cgagcagatc
     1081 ctccaccgtg cgctccagcc gctccgactc gtgcagcacc cgcccggcca ggcggcggag
     1141 catctcggcg tcctcctcgg cggccatcgt ctcggccagc aacccgaggg cgccgatcgg
     1201 ggtcttcagc tcgtggctga cgttggccac gaagtcgcgg cgcatgttct cgatccggcg
     1261 ggcctccgac acgtcccgca ggaaggccac gccgccgatc ggccgggtgc cgtcgtcgag
     1321 cgggacggcc cggacgtgca gcacccgccg gggcgggccg aagagccgga gctcccgctc
     1381 cccctcgagg cctcgcaggg tccggtcgag gagctcccag atggcgtcgg ccgtcaaggc
     1441 gtcgcctccc ggcccggtga actgctcggc gacgccgttc cggaggacga cctccccccg
     1501 ctggtcgacg acgacgacgc cgtcggccag gtggttgaag gcggccgaga gccggacgct
     1561 gtcgcccttc gcctcgtcga cccgcagctg gccgcgctcg gcgctgcgct ccagccgctc
     1621 cagcgccgcc tccttgccgc ccttcccgtc catcggaacg gcgtggtcct cgaggcgggc
     1681 gccgacggtc agcagccggc ggacgagcga ccgccgggcc cgcagccaca ggccggccac
     1741 cagcaggagg acgacgactc ccgccgaaat gatcaccggc acgctcgagc ccacgtccat
     1801 ttgccatcca gtgtaagcac tcgggatcca tcgctaggat ggattgccag acccgagggt
     1861 aagggagccc accggtgcga ttccggctca ttccccgtga cgacggcttt ttcccccttt
     1921 tcgaccaggc tgccgccaac ctggcggagg gggcgcgcct gctgcgggac ctgctcgacg
     1981 acttcgagga cgtccacgcc aagcacgccg ccatcaagga ctgcgagcgc aagaacgacg
     2041 cggtgaccga cacgatcctc cgccggctcg accagagctt cgtcgcgccc ttcgaccggg
     2101 aggacatcca cgccctcacc gagcagatgg acgacgtcgt cgacgacatc caagcggtgt
     2161 cggagctgct gctcctccac gacgtcgacg agccgctcga cgaggtgcgg gagctcggcg
     2221 atgtcctcgt caaggcggcc gaggccaatg tcgccctcat cggcaagctg tcgaagctgc
     2281 gggggatcga ctcggagctc caggtcgtcg accagctcga gagcgaggcc gaccggatct
     2341 accgccggtc ggtcgcccac ctgttctccg gcgacttcaa cgccttcgac gtgctccggt
     2401 ggaaggacat cgtcgaggcc atcgaggagt cggtcaacgg gctcgagaag atcggcgaca
     2461 tcgtggaagg catcgccctc aagcacagct gaggcggcgc ctccggcgcc cgacctttcc
     2521 cttccgacga agctgtccct cgctccgctc gggcttcgtc ggtcagccga agcggccagt
     2581 gatgtagccc tccgtgcggg ggtcggacgg gtgggtgaag atctgctccg tccggccgaa
     2641 ttccaccagg ccgccgtggc gggtgccgtc ctcctggtcg acgacgctca tgaaggccgt
     2701 catgtcggac acgcgggccg cctgctgcat gttgtgggtc acgatgacga tcgtgtagtc
     2761 ccgcttgagc tcctccatca ggtcctcgat ccgggcggtg gcgatcgggt cgagggccga
     2821 gcacggctcg tccatcagga tcacgtcggg ctcgacggcg atggcccggg cgatgcagag
     2881 ccgctgctgc tggccgccgg agaggtcgag gccgctgtgg tggagcttgt ccttcacctc
     2941 gtcccacagg gcggcgctgg tcagcgacct ctcgacgatc tcgtcgaggc ccttcttctt
     3001 gccgttcagc cgggggccga aggcgacgtt gtcgtagatc gacttcggga aggggttggg
     3061 cttctggaac accatgccga tccggcggcg gacctcggtg gcgttgaccc cgtcgccgta
     3121 gacgtcgtgg cccttgtact tgatcgagcc ccccacccgg gccgacggga cgaggtcgtt
     3181 catgcggttg aaacaccgca ggaccgtgct cttgccgcag ccggacggcc cgatgaaggc
     3241 ggtgatctcg ttggcggcga tgtcgcaggt gacgccggcc acggcctggg tgggcccgta
     3301 gtggacgctc aggtccgcca ccgagaacac gatctcccgg tcggccccgg ggcgctcgcc
     3361 ggtggtgtcg tccgcggtgc cgacgagcgg cgggagaacc gtcgacatct gcatgttccg
     3421 aacgtaagag ccggaggcga ccccttcgta aacggatgcg cacgctcagg tgaacgaccc
     3481 cggaaccccg ccgcagaacc ggacaacccg gacacgtggt ccggggaacg ggtgacaatg
     3541 ccgtcatgaa cgaaacacgg cacgcctacc acggccagct cgacgacctg cgggtcgacg
     3601 tcgtacgcct cggcctcatg gccagcgacg ccatcgccgc cggcaccgac gccttcctcg
     3661 aggccgacct ggccggcgcc gaccgggtca tccatgccga cgccgccctc gacgagctga
     3721 cgcactcgct ggaggagcgt tgctacacga cgctggcgcg ccagcagccg atggcctcgg
     3781 atctccggat ggtggtggcg gtgctgcgca cgatccacga gctcgaacgg accggcgacc
     3841 tcatggtcaa cgtggccaag accacccgtc ggctctaccc ggtggagctg cccgacccca
     3901 tccggcggat catcgagcag atgggccgcc aggccggcgt ccagctccgg ctggccctgg
     3961 aggccttcgc cgagtcggac tgcgcccggg ccatggccct ggaggacatg gacgacgtga
     4021 tggacgacct ccagcgggag ctgttccgga cgatcttcgc tctcggccgg gccgacgagg
     4081 ccgggttgca gcagatggtg caggtggcat tggtcggccg gtactacgag cggatggccg
     4141 accacgccgt caacatcggg gaacgggtga actacatggt cacgggcgag gtgcccggca
     4201 ccgacgggga agccgcgaac ggaatcaccc tggactaagg cccccggccg ctccgcccga
     4261 cacatcaggg gaggagcgag cgccggaggg gccg
//
LOCUS       DATGJT010000317         4448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_146418, whole genome shotgun sequence.
ACCESSION   DATGJT010000317 DATGJT010000000
VERSION     DATGJT010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4448
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146418"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VKX24_05450"
     CDS             <1..565
                     /locus_tag="VKX24_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007899335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HLJ07962.1"
                     /translation="PAAPAVASKRPSGKGAKPAEDVKPAPPRVVAAAKAAPKTGAVKP
                     AAKAVKATAPIKSAAKAKATPKPSAKAPAKAASKGAAKAASKAKPAAQPKAAGKPAGK
                     PKAAAKPAGKTKAAPSKTKAARVKAAAKSPAKAKAAPKASAKPAAKSSAKAPPKSAAK
                     PAPKSKATAKPASKAKVAKAPAKKAAK"
     gene            complement(662..1552)
                     /locus_tag="VKX24_05455"
     CDS             complement(662..1552)
                     /locus_tag="VKX24_05455"
                     /inference="COORDINATES: protein motif:HMM:NF019454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate formiminotransferase"
                     /protein_id="HLJ07963.1"
                     /translation="MTGPILVSPVNISEGRRPEVIGRIAAAAETTGVHVLDVHSDPDH
                     NRSVLTVAGPAEALVPALLEATAEAVGRIDISRHEGVHPRLGAVDVVPFVPLRPQDRP
                     AALDAALRFAESVFDHLGVPCFFYEAAAGGRTLPEVRRRAFKGLPPDLPRDHASGPHP
                     LAGAIAVGVRDLLVAFNVDLAGDDLSAARSIAAEVRRLDGVRALGLALPSRHQTQVSM
                     NLVEPLVTGVGDAFGAVAALAAEAGVGVAGSELVGLAPRGSLPENIARLGLARPPKVL
                     EDELAHAFGAGAALLAEKHP"
     gene            complement(1549..1827)
                     /locus_tag="VKX24_05460"
                     /pseudo
     CDS             complement(1549..1827)
                     /locus_tag="VKX24_05460"
                     /inference="COORDINATES: protein motif:HMM:NF024590.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
     gene            complement(1840..2298)
                     /locus_tag="VKX24_05465"
     CDS             complement(1840..2298)
                     /locus_tag="VKX24_05465"
                     /inference="COORDINATES: protein motif:HMM:NF024590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HLJ07964.1"
                     /translation="MAILNDADATYLREQLATLLTKQVRIRLFTEPATGLYVPGRPTC
                     ETCADAEALMNEVADLSDRIYLEIVDVSAHPDLAREAGVALIPTMAVDDGADSGVRFV
                     GLPDGYEFSSFVETLVAAGSEAGHGLSDESLARLESLTTEVEIKTFVTPT"
     gene            2408..3727
                     /gene="moeB"
                     /locus_tag="VKX24_05470"
     CDS             2408..3727
                     /gene="moeB"
                     /locus_tag="VKX24_05470"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:3338..3340,aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HLJ07965.1"
                     /translation="MADAIRGRDVVKKAKTEVEALDLEQVDRMIKHHDPVTLVDVREG
                     DEWRAGHLPGAVHIPRAYLELRVDEALPDKDAPIVLYCAGGNRSALAARTMHELGYTN
                     IRHMVRGFSGWRDGGFDIVVPKQWTPEQRERYSRHFTLPEVAEEGQRRISEGRVLVVG
                     AGGLGAPALYYLAAAGVGTLGIVDFDAVDISNLQRQVIHSTSRIGMNKAESAKMTIED
                     LNPDVDVRIWRERITEDNVTEIVSGFDVVIDATDNFSTRYLLNETAVRHGLPYVYGSI
                     FRFEGYSSVFWPAKGGPCYRCMHPEAAPDNLAPTUSEAGVLGVLPGIVGVIQANEALK
                     ILVGYGEPLIGRLLMFDAQPTTFRELKLRRDPRCATCGKDAPAWLAYEGGTGTLAAPA
                     PSSNGAAPEAAPASSNGSANGEVASAESPAKGKAKAKSGSSKARSSR"
     gene            complement(3936..4307)
                     /locus_tag="VKX24_05475"
     CDS             complement(3936..4307)
                     /locus_tag="VKX24_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07966.1"
                     /translation="MDIPTTVAWEGRFGDADLKIEIPPSGRIHAEWRTAAGSRQKVVD
                     SIEQLERSVLFQLMVGANVRDEVREEIADAVALTLANRTPLPSDDPSAPRRPTRKKAR
                     ANQPPRRRTGGGGGARPRRRH"
BASE COUNT          731 a         1542 c         1594 g          581 t
ORIGIN      
        1 gccggccgcc cctgcggtcg cttccaagag gccttccggg aagggggcca agcccgcgga
       61 ggacgtcaag cctgctcccc cccgggtggt agcggcagcc aaggctgcgc cgaagacggg
      121 tgccgtcaag cccgcagcca aggcggtgaa ggcgaccgcc ccgatcaagt ccgcggcaaa
      181 ggcaaaggcc acccccaagc cgtcggccaa ggcgccggcg aaggcggcat cgaagggcgc
      241 agcgaaggcg gcgtcgaagg caaagccggc ggctcaaccc aaggcggcgg gcaagccggc
      301 cgggaagccc aaggcggcgg ccaagcccgc cgggaagaca aaggccgccc cgtcgaagac
      361 caaggccgcc cgggtgaagg cggcggccaa gtctccagcc aaggcgaagg cggcaccgaa
      421 ggccagcgcc aagccggcag caaagtcctc ggcgaaggcg ccccccaagt cggcggcgaa
      481 gccggcgcct aagtcgaagg cgacggcaaa gcccgccagc aaggccaagg tggcaaaggc
      541 cccggccaag aaggccgcca agtaggccgc gttatcgggc cggatcgccc agaccaggtc
      601 agcagatccg atcgaaatag aacacgggtt ctcgggttga cccccgggaa cccgtttcca
      661 tttacgggtg cttttcggcg agcaacgctg ctccggcgcc gaaagcgtgg gccaattcgt
      721 cctccagcac cttcggcggc cgcgccagtc cgagccgggc gatgttctcg ggaagcgacc
      781 ctctcggggc cagcccgacc agctcgctgc cggcgacgcc gactccggct tcggcggcaa
      841 gcgccgccac agcaccgaag gcgtcgccca caccggtgac caggggctcg accaggttca
      901 tcgacacctg ggtctggtgg cggctcggga gggccagccc cagcgcccgc acgccgtcga
      961 ggcggcgcac ttcggcggcg atcgaccttg cggcggagag gtcgtcgccg gccaggtcca
     1021 cgttgaaggc gacgagcagg tcccggacgc ccaccgcgat cgcaccggcc agcgggtggg
     1081 ggccgctggc gtggtcacgg ggtaggtcgg gggggagacc cttgaacgcc cggcggcgga
     1141 cctccggcag ggtccgcccc cccgccgctg cctcgtagaa gaagcagggc accccgagat
     1201 ggtcgaagac cgactcggcg aagcggaggg cggcgtcgag ggcggcgggc cggtcctgcg
     1261 gccgcagtgg cacgaacggc accacgtcga ccgctcccag ccgggggtgg accccctcgt
     1321 ggcgggagat gtcgatccgc cccaccgcct ccgcagtggc ctcaagaagg gccgggacca
     1381 gcgcctccgc cggcccagcg acggtcagaa ccgagcggtt gtggtcggga tcggagtgga
     1441 cgtcgaggac gtggacccca gtggtctcgg ccgcggcggc gatccgcccg atcacctccg
     1501 gacgccggcc ctccgagatg tttaccgggg agacgaggat cgggccggtc actccaggga
     1561 ctggctaccc ggcgattggc caccgtcgcc cgaggactgg ctggcaccgt cgcccgatgc
     1621 gccctggtcg accgccgaca gcacggcgtc gacgaacgcc tcctcgggca gcgccccgag
     1681 gaaggcgacc cggtcgttga cgaccatctt cggcactgcc gagacggcgt aggcggcggc
     1741 cacctgcggg tactcctggg cctcgatcga aaccgagcgg atgtgcgggc tggccagtgc
     1801 caggcggtgc gccgtcacga cggcgcgggg gcagtgtggt caggtgggag tgacgaaggt
     1861 cttgatctcg acctcggtgg tcagcgactc cagccgcgcc aacgactcgt cagagagccc
     1921 gtggcccgcc tcgctcccgg cggcgaccag ggtctcgaca aacgagctga actcgtagcc
     1981 gtcgggcagg ccgacgaagc gcacgccgga gtcggcacca tcgtcgacgg ccatcgtcgg
     2041 gatcagggcg acaccggcct cccgggcgag gtcgggatgg gccgagacgt cgacgatctc
     2101 taggtagatc cggtcggaca ggtcggcgac ctcgttcatg agcgcctcgg cgtcggcgca
     2161 ggtctcgcag gtgggccggc ccgggacgta gagaccggtt gccggctcgg tgaacagccg
     2221 gatccgtacc tgcttggtca gcagcgtggc cagctgctcc cggaggtagg tcgcatcggc
     2281 gtcgttcagg atggccatgc catccagcct acccgcggtg acaaggcggt cccgagcccg
     2341 accggctggg ccagttcgcg agccgcacta gaattggcca caaaccttcc caatccagga
     2401 gacagcaatg gcggacgcga ttcgcgggcg ggacgtggtc aagaaggcca agaccgaggt
     2461 cgaggcgctg gacctggagc aggtcgaccg gatgatcaag caccacgacc ccgtgaccct
     2521 ggtcgacgtc cgcgagggcg acgagtggcg ggccggccac ctcccgggcg cggtccacat
     2581 cccccgggcc tacttggagc tgcgggtcga cgaggcgctg cccgacaagg acgcccccat
     2641 cgtcctgtac tgcgccggcg ggaaccgttc cgccctggcc gcccggacga tgcacgagct
     2701 gggctacacc aacattcgcc acatggtccg cggcttctcg ggctggcggg acgggggctt
     2761 cgacatcgtc gtgcccaagc agtggacgcc cgagcaacgg gagcgctact cgcgccactt
     2821 cacgctgccc gaggtcgccg aggaaggtca gcgcaggatt tccgaagggc gggtcctggt
     2881 ggtcggggcc ggtggcctcg gggcgccggc gctgtactac ctggcggcgg cgggcgtcgg
     2941 gaccctgggc attgtcgact tcgacgccgt cgacatctcc aacctgcagc gccaggtgat
     3001 ccactcgacc tcacggatcg gaatgaacaa ggccgagagc gccaagatga ccatcgagga
     3061 cctgaacccc gacgtcgacg tgcgcatctg gcgggagcgc atcaccgagg acaacgtcac
     3121 cgagatcgtc tccggcttcg acgtcgtcat cgacgccacc gacaacttct ccacccgcta
     3181 cctgctcaat gagaccgcgg tgcgccacgg gctcccgtac gtctacgggt cgatcttccg
     3241 cttcgagggc tactccagcg tgttctggcc ggccaagggc ggcccctgct accggtgcat
     3301 gcacccggag gcggcacccg acaacctggc ccccacttga agtgaggccg gggtcctggg
     3361 cgtgctccca ggcatcgtcg gtgtcatcca ggccaacgag gccctgaaga tcctggtcgg
     3421 gtacggcgag ccgctgatcg gccggctgct gatgttcgac gcgcagccga ccaccttccg
     3481 cgagctcaag ctgcgccgcg accccaggtg cgcgacctgt ggcaaggacg ctccggcgtg
     3541 gctggcctac gagggcggca ccggcacgct ggcggctccg gccccgagct ccaacggcgc
     3601 cgcaccggaa gcggctccgg cgagctcgaa cggcagtgcc aacggcgagg tggcttcggc
     3661 cgagtcccca gccaagggga aggccaaggc caagtcgggc tccagcaagg cccgctcgtc
     3721 gcgctgatcc ccggggtttc ttcgggtttt atgtgtggtg aggtgttata tacacgcttc
     3781 ctcgcacaca aacgcgctgc agcagttctg tggacgacga ggtgccaaaa tggcccgttt
     3841 tcatccacaa aaccgccgat cctgctgcgg cttggccgga ctcaaccccg ccgagccata
     3901 acaccccggc gcggcgggtg cccggtgagg ggaggctagt ggcgccggcg gggccgggcg
     3961 ccgccaccgc caccggtgcg gcgccgcggg ggctggttgg cgcgggcctt cttgcgggtc
     4021 ggccggcggg gggctgaggg atcgtcggag ggcagcggcg tgcggttcgc cagggtgagc
     4081 gccaccgcgt cggcgatctc ctcgcggacc tcgtctcgca cgttggcgcc gaccatcagc
     4141 tggaaaagca cgctgcgctc gagctgttcg atcgagtcca cgaccttctg ccggctcccg
     4201 gcggcggtgc gccactcagc gtggatccgg ccggagggtg ggatctcgat cttgaggtca
     4261 gcgtcgccga agcggccctc ccaggcaacc gtggtcggta tatccaagca gctgctcctt
     4321 tgcgtaggcg accgccgtca ccgggccggg tgccagcgag gatgctcgtg tggccggcct
     4381 ggccgtaccg tcaaagccaa aacagcgggc agtcctgccc gccgatcgcg tatcgtcggc
     4441 gaggcccg
//
LOCUS       DATGJT010000318         2558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1492725, whole genome shotgun sequence.
ACCESSION   DATGJT010000318 DATGJT010000000
VERSION     DATGJT010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492725"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VKX24_05480"
     CDS             <1..357
                     /locus_tag="VKX24_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003933425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLJ07967.1"
                     /translation="VVDRVMELTDGVGAEVVLDFVGERGVPAQVPAMLRQGGTYYVVG
                     YGERVDIPNWDFVIREINVVGNLVGNYMDLVELMALAARGKVTLHTQEYSLKDINQAI
                     DDLYGGRLNGRGILVP"
     gene            complement(358..627)
                     /locus_tag="VKX24_05485"
     CDS             complement(358..627)
                     /locus_tag="VKX24_05485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07968.1"
                     /translation="MERVERRRLPWPELTLIACGLIIIIVVTVQSVKPSCHQWKQRLG
                     DVSAAYMGAAGTEEHPASGRPIETDATGLSRAARQVLDQRPFACL"
     gene            684..974
                     /locus_tag="VKX24_05490"
     CDS             684..974
                     /locus_tag="VKX24_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07969.1"
                     /translation="MANLTFDFGMAAAAFISVFACFHSRQQLHVAMEEMRSRHAEILG
                     EIQGILAGISSDLDRLGRLIPEDSAAEARDAAQRLVRAMDELVLITRADWRK"
     gene            complement(911..1549)
                     /locus_tag="VKX24_05495"
     CDS             complement(911..1549)
                     /locus_tag="VKX24_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07970.1"
                     /translation="MTSLQMVKERPLERIAERGVCAGLVGSAATGLFAMVASATYQGR
                     GFFTPMYHAAFTVDPETMVASIAQAAAGEPFYFVRESFIFGMITYAFVGGALGALFGV
                     VARVLRFHGARALAGGVAYGVTVLGVMSLLVLPRVGAASGAGKPITDMGAELGWPTFV
                     AYFLIFGLVLGAWVWFRPQDIGAAPRAGSRRRHFRQSARVISTSSSIARTSR"
     gene            complement(1778..2518)
                     /locus_tag="VKX24_05500"
     CDS             complement(1778..2518)
                     /locus_tag="VKX24_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07971.1"
                     /translation="MDQTEGYGAAAPLGLGGVLRRAGAMYGARGGKLVPAYALVFVVL
                     RELLLVLVPVDGSPVAVLLLAVIIQAVIPAFVGSLLVAAAIVVLIGETDSIRPAWSAL
                     ADQRSDIYRAAGWSAVMAVFAAVTLGAFGVIIQPVVLGPPLVIHDLVLRRSRIDAAWA
                     RSRSMVSRDSLQLVYLLTIPAAIGVVLSSAVAALGALSGEMPGALRAVLHFAAQGALF
                     GAAIPLVAAVGALLYSEMASTLGGEEAA"
BASE COUNT          431 a          881 c          884 g          362 t
ORIGIN      
        1 gtcgtcgacc gcgtcatgga gctgaccgac ggggtcggtg ccgaggtcgt cctggacttc
       61 gtcggggagc gcggcgtgcc cgcccaggtt cccgccatgc ttcgtcaggg cggcacctat
      121 tacgtggtcg gttacggcga gcgggtcgac atccccaact gggacttcgt gatccgggag
      181 atcaacgtcg tcgggaacct ggtgggcaac tacatggacc tcgtggaact catggcgctg
      241 gccgcccggg gcaaggtcac cctccacacc caggagtact cgctgaagga catcaaccag
      301 gccatcgacg acctctacgg cggtcgcctc aacgggcgcg gcattctcgt cccctaatca
      361 gagacaggcg aacggccgct ggtcgagcac ctggcgggct gctcggctga gcccggtcgc
      421 gtcggtctcg atcgggcgtc ccgaggcggg gtgctcctcc gttccggccg ctcccatgta
      481 ggcggcgctg acgtcgccca ggcgttgctt ccactgatga cagctcggct tcacgctctg
      541 gacggtcacg acgatgatga tgatgaggcc gcaggcgatc agcgtcagtt cgggccaggg
      601 cagcctgcgc ctttcgacgc gctccatgtc ctgagcttag gctcgggacg cagacggcgc
      661 caccgtccga cgggaggccg ggcatggcga acctgacctt tgatttcggg atggcggcgg
      721 cggccttcat cagtgtgttc gcctgcttcc acagccgcca gcagctccac gtggcgatgg
      781 aggagatgcg ctcccggcac gccgagatcc tcggcgagat ccaggggatc ctggccggga
      841 tcagcagtga cctggaccgc ctcggccggc tgatcccgga ggattccgcc gccgaggccc
      901 gggacgccgc tcagcggctg gtgcgggcga tggacgaact ggtgctgatc acccgggccg
      961 actggcggaa gtgacgtcgc cgggagccgg cccggggggc cgctccgatg tcctggggcc
     1021 ggaaccacac ccacgccccc aggacgagtc cgaagatgag gaagtaggcc acgaaggtcg
     1081 gccagccgag ctcggctccc atatcggtga tgggctttcc ggcgcccgag gcggcgccca
     1141 cccggggcag cacgagcagg ctcatgacgc cgaggacggt cacgccgtag gcgactccgc
     1201 cggccagcgc ccgggcaccg tggaagcgca ggacccgggc cacgacaccg aagagagcgc
     1261 cgagcgcccc gccgacgaag gcgtaggtga tcatcccgaa gatgaacgac tcccggacga
     1321 agtagaaggg ctcgcccgcc gcggcctggg cgatggaggc gaccatcgtc tcggggtcga
     1381 cggtgaaggc ggcgtggtac atgggggtga agaatccccg cccctggtac gtcgccgacg
     1441 ccaccatggc gaacagaccc gtggccgcgc ttccgaccag gccggcgcag acgccccgct
     1501 cggcgatgcg ttcgagcggt cgttccttga ccatctggag cgatgtcatt gccgccgtcc
     1561 tttccgcccc cgccgcgacg ttgtggtctt ttcgcagatt ttcctggacg ccgggccgga
     1621 gcgtggtcaa cctagtgccg ggagagacgc acacagacgg tcggaggtcc tatgaacagc
     1681 gcgggattcg ggatcacaat cgggatcctg gccatccttt cgttgatcat catccagtgg
     1741 gtcctcagca acccgaactc gtagcgcccc cgcgccgtca cgccgcctcc tcgccgccga
     1801 gcgtcgaggc catctcgctg tagagcaagg cgcccaccgc cgccacgagg ggaatggccg
     1861 cgccgaagag cgcaccctga gcggcgaaat gcaggacggc ccgcagcgcc ccgggcatct
     1921 cgcccgagag cgcgccgagc gccgcgacgg ccgacgacag cacgactccg atggcggccg
     1981 ggatcgtgag cagatagacc agttgcagcg aatcgcgtga gaccatgctc cgggatcggg
     2041 cccaggcggc gtcgatccgg ctccggcgca gcaccagatc gtggatgaca agcggcggcc
     2101 ccagcacgac cggctggatg atgacgccga aagcgcccag cgtcacggcg gcgaagaccg
     2161 ccatcacggc cgaccacccg gccgcccggt agatgtcgga ccgttgatcg gcgagggccg
     2221 accaggccgg tctgatggag tcggtttcgc cgatcagcac gacaatggcc gccgccacga
     2281 gaaggcttcc cacgaaggcc gggatcacgg cctggatgat cacggccagg aggagcacgg
     2341 ccactggtga tccgtcgacg ggaacgagga ccagcagtag ctcccgcaga acgacgaaga
     2401 cgagggcgta ggccggcacg agctttccgc cccgggcgcc gtacatcgcg cccgcccggc
     2461 gcagcacacc gcccagtccg aggggtgccg ccgccccgta accctccgtc tggtccaccg
     2521 ggccattgta gagacgcgtc gctcgtcctt ctcgtcct
//
LOCUS       DATGJT010000319         2918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_42303, whole genome shotgun sequence.
ACCESSION   DATGJT010000319 DATGJT010000000
VERSION     DATGJT010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42303"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..1268)
                     /locus_tag="VKX24_05505"
     CDS             complement(30..1268)
                     /locus_tag="VKX24_05505"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HLJ07972.1"
                     /translation="MVVLFASGAGYSVRSMAAAAGPQHLSALHVDRRGPATGPAGATP
                     ASTASTTGTTAAVEAVPTTAAAPPATAPSPQPAVDRPIVAPAFLPRVRSAGARGSRTA
                     YPAAPREGGVWAVVVGIDDYPGTDADLKAAVADAREVDSALAGYGVPLTHRLVLLDKA
                     ATGDNIRGALGWMTARATADSTAVFFYSGHVRKVSGDPAHDGRSIDEAIVGSDGDNVY
                     SGEVAEILRGLQARTAWLGIAACYGGGFDDALAPGRVLTAAAGENDVAYENSGLGHSY
                     MVEYMVHRAMLQGKAPGSVQAAFEWAKAQIAHDYPNRQPVMIDRSRGPVVLGRTVPAA
                     APDNRRPPAAAEPPAQKDPQAGGSAPPSTAPEPKPGENPCAQVLSVTLCSEKRSSGPS
                     GPEGRRERAPARHRAGTGPR"
     gene            1582..2043
                     /locus_tag="VKX24_05510"
     CDS             1582..2043
                     /locus_tag="VKX24_05510"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020556781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HLJ07973.1"
                     /translation="MGLALDEAAAAADHGDVPVGAVVAAADGRVLARRHNERELAGDP
                     TAHAELLALRDAAAVLGRWRLEGCVLVATIEPCPMCAGAALAARVATVVFGATDPKAG
                     ACGSLYNLGADPRLNHEMAIVPGVRAEEAAVLIRRFFAGRRSPATGRDAVP"
     gene            2055..2139
                     /locus_tag="VKX24_05515"
     tRNA            2055..2139
                     /locus_tag="VKX24_05515"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2089..2091,aa:Ser,seq:cga)
     gene            complement(2466..>2918)
                     /locus_tag="VKX24_05520"
     CDS             complement(2466..>2918)
                     /locus_tag="VKX24_05520"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HLJ07974.1"
                     /translation="SHAEAARLFGAAETLREETGHRRWPIDEALFQADVAASRAELGP
                     DAFEALRQEGASLELAGAVAYAGRARGERKRPSKGWEALTPTELEVARLAADGLSNPE
                     IGGRLFISPGTAKTHLAHIYAKLGIANRAQLAAIVTARSFNVRAGGPA"
BASE COUNT          355 a         1020 c         1126 g          417 t
ORIGIN      
        1 ggggcgggga gccccggccg ccgcggttct cagcggggtc cggtgccggc ccgatgccgg
       61 gccggagccc gttcccggcg gccctcaggg ccggacggcc cgctcgaccg cttctccgag
      121 cacagcgtga cgctcagcac ctgggcgcag gggttctcgc ccggtttggg ttcgggggcg
      181 gtggacggcg gcgccgaccc gcccgcctgg ggatccttct gggccggcgg ctcggcggcg
      241 gccggcggcc ggcggttgtc gggagcggcg gcggggacgg tccggccgag caccaccggc
      301 ccccgggagc ggtcgatcat caccggctgg cggttggggt agtcgtgggc gatctgggcc
      361 ttggcccact cgaaggcggc ctggaccgag ccgggggcct tcccctggag catggcccgg
      421 tggaccatgt actccaccat gtagctgtgt ccgagacccg agttctcgta ggccacgtcg
      481 ttctcgccgg cggcggcggt gaggacccgg ccgggggcga gggcgtcgtc gaagcccccg
      541 ccgtagcagg cggcgatccc caaccatgca gtgcgggcct ggagcccgcg gaggatctcg
      601 gcgacctctc cgctgtagac gttgtcgccg tcggacccga cgatcgcctc gtcgatcgac
      661 cgcccgtcgt gcgccggatc gccgctcact ttgcggacgt ggccggaata gaagaagacc
      721 gccgtggagt cggccgtcgc ccgggcggtc atccagccga gggcgccccg gatgttgtcg
      781 ccggtggcgg ccttgtcgag gaggacgagc cggtgggtga gcggcacgcc gtagccggcg
      841 agagcgctgt cgacctcgcg ggcgtcggcg acggcggcct tgaggtcggc gtcggtgccg
      901 ggatagtcgt cgataccgac gacgaccgcc cacacgccgc cctcccgggg ggcggccgga
      961 tacgcggtac ggctgccccg ggcgcccgcg gaacggaccc ggggtaggaa ggccggggcg
     1021 acgatgggcc ggtcgacggc cggctgcgga ctcggagcgg tggccggcgg agcggcggcg
     1081 gtcgtcggaa ccgcttcaac ggccgccgtc gtgccggtcg tggaggcggt ggacgccggg
     1141 gtcgcgccgg cgggacccgt cgccggtccg cggcggtcga cgtggagggc cgagaggtgc
     1201 tgggggccgg ccgcggcggc catgctgcgg acggagtagc cggcgccgct ggcgaagagg
     1261 acgaccacgg cgatgacgct gatcgcccgg gcccggccgg tcaggcggcg gacccgccgg
     1321 acggccccaa ccccgcccga cgaaaccgct gaggcttgtt tcgtcagagc gatcggggtt
     1381 tccttcgagc tctcgtacgc cgcagagtcg tcgatcgccg tttccctcgc tgattcagca
     1441 gggaaggccc gcttgctccc ctgcccgccc ggattgtcca ctttacgcca cttcgggcga
     1501 tttgcgagtg atgacctgtg cggcggctgt gacggcggtt gattaccgtt cgggccggtg
     1561 acagcgcatt tcagccagct gatgggcctg gccctcgacg aggcggcggc ggccgcagac
     1621 cacggcgacg tgcccgtcgg cgccgtggtg gcggcggcgg acgggcgggt cctcgcccgc
     1681 cgtcacaacg aacgcgagct ggccggcgac cccaccgccc acgccgagct cctggcgctc
     1741 cgggacgcgg cggcggttct cggccgctgg cggctggagg gctgcgtcct ggtggccacc
     1801 atcgagccct gcccgatgtg cgccggcgcg gcgctggccg ccagggtcgc cacagtcgtc
     1861 ttcggcgcca ccgatccgaa ggccggagcc tgcggcagcc tctacaacct gggggcggat
     1921 ccccggctca accacgagat ggcgatcgtc ccgggcgtgc gggccgagga ggccgccgtc
     1981 ctcatccggc ggttcttcgc cggccgccgc tcaccggcga ccggccggga cgccgtcccc
     2041 tagactccgc tcccggaggg atgcgagagc ggccgaatcg gacggtctcg aaaaccgttg
     2101 agcctccggg ttccgtgggt tcaaatccca ctccctccgc tctccgctga ccaggtgcct
     2161 tcgtatgaat gccctggtca gcacttattt ccgggtgcct tcagaccctg ccaaccagcg
     2221 accacggctg cccgggaatg tccgccagcg accctgattc tggggtgcgg atggggtgcg
     2281 agcgaaaatc tgggggtgcg aaaggggtgc cgaaacgggc ggcccgaacc cccgcgggtg
     2341 gcggcctccc ggccaagtgt tccccgactc agggtgacgg gaccgaaccc gacttaccac
     2401 ctagggctgt ccggcatcat gggaccgacg tcgcttcctg cgcttccggc ggacgtcgag
     2461 ccgggtcacg ctgggccacc ggctcggacg ttgaaggacc gggcggtgac gatggcggcg
     2521 agctgggccc ggttggcgat cccgagcttg gcgtagatgt gcgccaggtg ggtcttggcc
     2581 gtaccgggac tgatgaacag ccgtccgccg atctcggggt tgctgaggcc atcagcggcc
     2641 aggcgggcga cctcgagctc ggtcggggtg agggcctccc agcccttgga cggccgtttg
     2701 cgctcgcccc gggcccggcc ggcataggcg acggcgccgg ccagttccag cgaggcgcct
     2761 tcctggcgca gcgcctcgaa ggcgtccggt ccgagttcgg cgcggctggc ggccacgtca
     2821 gcctggaaga gagcctcgtc gatgggccag cggcggtgcc cggtctcctc tcgcagggtc
     2881 tccgcggcgc cgaacagccg ggccgcctcc gcgtggct
//
LOCUS       DATGJT010000320         2219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1080050, whole genome shotgun sequence.
ACCESSION   DATGJT010000320 DATGJT010000000
VERSION     DATGJT010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080050"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VKX24_05525"
     CDS             <1..251
                     /locus_tag="VKX24_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020520904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase type 11"
                     /protein_id="HLJ07975.1"
                     /translation="AGYSDVTVDAVPSPVRLPSATECVRFEQESFGALHQMLAGVPAD
                     ERPAVWDQIGAALTRFETPGGFVGPCELLVGAGTKARP"
     gene            248..1231
                     /locus_tag="VKX24_05530"
     CDS             248..1231
                     /locus_tag="VKX24_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019004602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HLJ07976.1"
                     /translation="MTTAKVVAAAVQAAPVFLDRDATIEKAARLMKEAAAGGAGLVVF
                     PEAFVPGYPDWVWRTIPWSDRHWYERLYDQAVEVPGPATEALGTASAEASVYLAIGVN
                     ERDGGTLYNTLLFFAPDGSLLGKHRKLVPTGGERLVYGQGDGSGLVVFDTPFGRLGGL
                     MCWENYMPLARAALYALGIDIYLAPTWDNSDTWVPTLRHIATEGRVYVLGVTFCMRGS
                     DVPRDLPGAAGIYGGDEDWLARGNTTICGPEGEVLAGPLEATEGILYAGIDADHARKV
                     RRQFDPVGHYSRSEILRLVVDREAKRFAHAGEIDEAQTTGPIGAERTVFGL"
     gene            1378..1977
                     /locus_tag="VKX24_05535"
     CDS             1378..1977
                     /locus_tag="VKX24_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07977.1"
                     /translation="MFAAVTLGATPFNRYGHHPIHCTSTQGGGRVCIAYSALALWYWP
                     VALLAAYVAISWFYLHRARRRGVGTRVQPYVVVGAVLALLTTAWTLWAYAHPAFLAET
                     LRLGSSQPATFLDRIASPAGAIGLALLLLAWIERSWPLLALTAVYLLATTSTVGFGAR
                     FSHPSPWAFLPHLLLDGTVLLVGGIILALVQRAQGRSTA"
     gene            1974..>2219
                     /locus_tag="VKX24_05540"
     CDS             1974..>2219
                     /locus_tag="VKX24_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015578355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HLJ07978.1"
                     /translation="MTDHPVNGIDDVVHQRVRLGILAITHEARKVEFAFLRNSLELTA
                     GNLSQHLTVLENAGLISIEKGYEGRRGRTWIQLTKTGR"
BASE COUNT          315 a          821 c          745 g          338 t
ORIGIN      
        1 cggccggtta ttccgacgtg accgtcgacg ccgtcccgtc cccggtgcgg cttccgtcgg
       61 caacggaatg cgtccggttc gagcaggagt ccttcggggc gctgcaccag atgctcgccg
      121 gggtgccggc ggacgaacgc cccgcggtat gggaccagat cggcgccgcg ctcacccggt
      181 tcgagacgcc cggcggcttc gtgggcccct gcgagctgct cgtgggcgcc ggcaccaagg
      241 ccaggccgtg accacggcca aggtggtcgc ggccgcggtc caggcggcgc ccgtgttcct
      301 cgaccgcgac gccaccatcg agaaggcggc ccggttgatg aaggaggcgg cggccggggg
      361 cgccgggctc gtcgtctttc ccgaggcgtt cgtgcccggg tatccggact gggtgtggcg
      421 cacgatcccc tggtccgacc ggcactggta cgagcggctc tacgaccagg cggtcgaggt
      481 gccgggcccg gcgacggagg cgctcggcac cgcgtcggcg gaggcttcgg tgtacctggc
      541 gatcggggtg aacgagcgcg acggcggaac gctctacaac acgctcctct tcttcgcgcc
      601 ggacgggtcg ctgctcggca agcaccggaa gctggtgccg acgggcggtg aacgcctcgt
      661 gtacgggcag ggcgacggct cgggcctggt cgtgttcgac acgcccttcg gccggctcgg
      721 cgggctgatg tgctgggaga actacatgcc cctcgcccgg gcggccctgt acgccctcgg
      781 catcgacatc tacctcgccc ccacctggga caacagtgac acgtgggtgc cgacgctccg
      841 ccacatcgcc acggagggcc gggtctacgt gctgggcgtc accttctgca tgcggggatc
      901 cgacgtcccc cgcgacctgc cgggggcggc ggggatctac ggcggggacg aagactggct
      961 ggcccggggc aacaccacga tctgcgggcc ggaaggcgag gtcctggccg gccccctgga
     1021 ggcgaccgag ggaatcctct acgccgggat cgacgccgac cacgcccgca aggtccggcg
     1081 gcagttcgac cccgtgggcc actactcgcg ctcggagatc cttcgcctcg tcgtcgaccg
     1141 ggaggccaag cggttcgccc acgccgggga gatcgacgag gcgcagacca ccggtcccat
     1201 tggcgcagaa aggacggttt tcggtctcta gacaagacaa gtttgttatg caaacctaat
     1261 tgcatgacga accagccagg ccccgcacgg gacgacgccc aaagccttct gtcagcgacc
     1321 cgcgacctca cccgccgagt ccggctcacc caacggggcg cctggttccc cctgctggtg
     1381 ttcgccgcgg tcacgctcgg cgccacaccc ttcaaccggt acggccacca tcccatccac
     1441 tgcacatcga ctcagggcgg ggggcgcgtc tgcatcgcct actcggccct ggcgctgtgg
     1501 tactggccgg tcgcccttct ggccgcctac gtggcgatca gttggttcta cctccaccgg
     1561 gcccgccggc gcggcgtcgg cacccgggtg cagccctacg tggtcgtcgg cgccgtcctc
     1621 gccctgctca cgacggcctg gacattgtgg gcgtacgccc acccggcgtt cctggccgag
     1681 acgctgcgcc tcgggtcgtc gcagcccgcc accttcctcg accggatcgc cagccccgcc
     1741 ggcgcgatcg gactggccct gctcctgctc gcctggatcg agcgcagttg gccgctcctc
     1801 gccctgaccg cggtgtatct gctcgccacc accagcacgg tcggcttcgg ggcccggttc
     1861 agccacccgt cgccgtgggc cttcctgccg cacctcctgc tcgacggcac cgtgctcctc
     1921 gtcgggggga tcatcctcgc actggtccaa cgggcccagg gacggtcgac cgcatgacgg
     1981 atcatcccgt caacggcatc gacgacgtcg tccaccagcg cgtcagactc ggcatcctcg
     2041 ccattaccca cgaggcccga aaggtggagt tcgccttcct gcgcaactct ctcgaactca
     2101 ccgccggcaa cctgtcccag cacctcacgg tgctggagaa cgccgggctg atcagcatcg
     2161 aaaagggcta tgagggccga cgcggccgca cctggatcca actcaccaag accggccgc
//
LOCUS       DATGJT010000321         5289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_974805, whole genome shotgun sequence.
ACCESSION   DATGJT010000321 DATGJT010000000
VERSION     DATGJT010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5289
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974805"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /locus_tag="VKX24_05545"
     CDS             complement(<1..828)
                     /locus_tag="VKX24_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006538878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HLJ07979.1"
                     /translation="MVSLLGQRDELLRLVEGSFPVSIHVRGNEITVSGEMTDAERVGR
                     LFEEMVLLVEAGNTIDTENLGRTIEMVKADERPSDVLNTAVLRGRKTIRPKTAGQKRY
                     VDAILSQIITFGIGPAGTGKSYLAVALAVQALQAKQVNRIVLTRPAVEAGERLGFLPG
                     DVIAKVDPYLRPLYDALYDMLEPEAVSRLMERGTIEVAPLAYMRGRTLNDSFIILDEA
                     QNTTAEQMKMFLTRLGFGSKAVVTGDVTQIDLPEGRSRSGLLLVRNILDGIAGLQFVE
                     "
     gene            complement(896..1258)
                     /locus_tag="VKX24_05550"
     CDS             complement(896..1258)
                     /locus_tag="VKX24_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011591025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HLJ07980.1"
                     /translation="MEDCLFCKIVAGSVPSTAVLETEHAYAFRDINPAAPVHVLVVPR
                     EHLGSVEDVGSDRAGLLGDLFDAIKAVAAKEGIAESGYRVVTNVGADAGQLVHHLHFH
                     VIGGRSLRWPPKGSEAGG"
     gene            complement(1306..1791)
                     /locus_tag="VKX24_05555"
     CDS             complement(1306..1791)
                     /locus_tag="VKX24_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HLJ07981.1"
                     /translation="MAISTQRVGDRLRSIRRQKGLSLHEVEAMSNEEFKASVLGAYER
                     GERVISVPRLMRLANVYGVPPEQLLPKEVEVDLTEPGAMDLSEGFAVDLNRLQECREP
                     EALALARLVAMIQAERQDFNGRVLTVRGDDLRALAYFLLTTPEELCGRLTGMGLQALP
                     A"
     gene            complement(2069..2842)
                     /locus_tag="VKX24_05560"
     CDS             complement(2069..2842)
                     /locus_tag="VKX24_05560"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HLJ07982.1"
                     /translation="MAPGAGECPPERWPADVGASAHIFVESASELVDRLDVTGDDGHH
                     LGRVLRLRAGETVTVADGSGLWRPYRITGIGGAAVHLDAVGPPEREPELAPRLAVAFA
                     LTKGDKPELVVQKLTELGVDRIVPVVAERSVARPDEARAATAAERWRRIAREAARQCR
                     RARLPAVEELRPLAGLAGHPGIVVAERGGGPAEGLGAPAAGEILVVVGPEGGLTAADV
                     EALQPWARLGLGPLVLRAETAALAAATVLSARRRPAGSD"
     gene            complement(2846..3961)
                     /gene="dnaJ"
                     /locus_tag="VKX24_05565"
     CDS             complement(2846..3961)
                     /gene="dnaJ"
                     /locus_tag="VKX24_05565"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018216605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HLJ07983.1"
                     /translation="MPTDFYEVLGIDRGASDDEIRKAYRRLARQYHPDANDGDPAAEA
                     RFKEISVAYDTLRDPEKRRRYDMYGPEGVGAGPGGPGMGGFDFGVSDLFDAFFGGGFG
                     GARGPAGPARGPDAEVHLVLDLEEAVFGATKPVELRMPVECERCGGSGCEPGTHPSTC
                     RTCGGAGEVRTVRRTILGQMMTATPCSACRGTGREILSPCRDCRGDGRVTLPATVEVQ
                     VPAGIDDGQRLRLAGRGPAAPRGGEPGDLYVSIAVRPHPRFQRDGDDLLHVLRLPMTQ
                     AALGAHLRIETLDGEEDLLIPAGTQTGRVFRLRGRGVPALRGRGRGDLIVSVEVVVPE
                     KLSAEEAQLVRRLAELRGEEVAPREEGFFSRIKSAFQ"
     gene            complement(3969..4982)
                     /gene="hrcA"
                     /locus_tag="VKX24_05570"
     CDS             complement(3969..4982)
                     /gene="hrcA"
                     /locus_tag="VKX24_05570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HLJ07984.1"
                     /translation="MDERKAAILKALIEEYVETGQPVGSNTVARGTGLGVSSATVRNE
                     MALLEREGYVTHPHTSAGRVPTDKGYRHFVDHLARKELQPGARQEVTSFFATAHHALE
                     DMLHETSLLLSRITDHAAVVVGPQPDAARVRSVQLVRLHETSLLVVAVLSNGHVERQF
                     LELGAEVDESRIGAATAVLETHLRDASFADLPVPRPTGDAATDVLTRQARDALVARFA
                     EGRPTEPVFVGGASRIAAELDAFTAGETVGRLLEVLEHQYLVVSLVRDLIDQGVTVRI
                     GSENHLEDLRECSVVLARFDVEGRAAGTVGILGPTRMNYPQAMAAVAAVSRRLGEHLS
                     PPG"
     gene            complement(5051..>5289)
                     /locus_tag="VKX24_05575"
     CDS             complement(5051..>5289)
                     /locus_tag="VKX24_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07985.1"
                     /translation="SAEGGHEVLDDADREREAAMLALRTRRGVPAGPAAGGLAVDGLA
                     ERCGDRFVLTPKGRLLANEATTRLLSARTGSRSA"
BASE COUNT          703 a         1913 c         1958 g          715 t
ORIGIN      
        1 ctccacgaac tgcaggcccg cgatcccgtc gaggatgttg cgcacgagca gcagcccgga
       61 ccgggaccgg ccctccggca ggtcgatctg cgtgacgtcg ccggtcacca cggccttcga
      121 cccgaacccc agccgggtga ggaacatctt catctgctcg gcggtcgtgt tctgggcttc
      181 gtcgaggatg atgaacgagt cgttcaacgt ccgaccgcgc atgtaggcca ggggggcgac
      241 ctcgatcgtg ccccgctcca tcagccggga gacggcctcg ggctcgagca tgtcgtagag
      301 ggcgtcgtag agcgggcgga ggtaggggtc gaccttggcg atgacgtcgc cgggcaggaa
      361 accgagccgt tccccggcct cgaccgccgg ccgggtgagg acgatgcggt tgacctgctt
      421 ggcctggagg gcctgcacgg ccagcgccac ggccaggtag ctcttgccgg tgccggcggg
      481 gccgatcccg aaggtgatga tctggctcaa gatggcgtcg acgtagcgct tctggccggc
      541 ggtcttcggc cggatggtct tgcggccccg cagcaccgcc gtgttgagga cgtcggaggg
      601 ccgttcgtcg gccttgacca tctcgatggt gcggcccagg ttctcggtgt cgatggtgtt
      661 cccggcctcg acgagcagca ccatctcctc gaagagccgg cccacccgct cggcgtcggt
      721 catctcaccc gagacggtga tctcgttgcc ccggacgtgg atcgagaccg ggaaggatcc
      781 ctccacgagg cgcaacaact cgtcccgctg ccccagcagg ctcaccatga gatggttgcc
      841 gggcacgagc accttcacct gggtctgctg atcgggcgtc aatccggctt caacactacc
      901 cgcccgcctc gctccccttc ggcggccagc ggagcgatcg cccgccgatg acgtggaagt
      961 ggaggtggtg caccagctgg ccggcgtcgg ccccgacgtt ggtgacgacc cggtagccgc
     1021 tttcggcgat cccctccttg gccgccaccg ccttgatggc gtcgaagagg tcgccgagca
     1081 gcccggcccg gtcggagccg acgtcctcca cgctgccgag atgctcccgg ggcacgacga
     1141 ggacgtggac gggcgccgca gggttgatgt cgcggaaggc gtaggcgtgc tcggtttcca
     1201 gcaccgccgt cgacgggacg gagcccgcga cgatcttgca gaagaggcag tcctccatca
     1261 acccgagcct accggcccgg actggccgct atgccggaat gaccgctatg ccggaagggc
     1321 ctgcagcccc atgccggtca gccggccgca gagctcctcg ggggtggtga gcaggaagta
     1381 ggccagcgcc cggaggtcgt cgccccggac ggtcaggacc cggccgttga agtcctgccg
     1441 ttcggcctgg atcatggcca cgagccgggc cagcgccagc gcctccggct cccggcactc
     1501 ttggagccgg ttcaggtcga cggcgaagcc ctcggagagg tccatcgccc ccggttcggt
     1561 gaggtcgacc tcgacttcct tcggcaggag ctgctcgggc ggcacgccgt agacgttggc
     1621 cagccgcatg agccggggca ccgagatgac ccgctccccc cgctcgtagg cgccgagaac
     1681 cgaggccttg aactcctcgt tcgacattgc ttcgacctcg tgcagcgaca ggcccttttg
     1741 ccgccggatg gaccggagcc ggtcccccac acgctgcgtc gagatggcca cccgatccct
     1801 ccaacttccg tcttcctgcc ccagcccgga tgccttcaag gctacctcgc gaacgcgcaa
     1861 atgtcgactc ttcgcggcat ttgaccactt tccgggggca ttggtgggtt cttgacgggt
     1921 ttggcgccgg gaatccgccc gaccctccag ctgtggtgcc tgcacctcgg tgtccatcgg
     1981 cccctcccca gtcggcgtgt ggtcggcgtc gagaaagcaa tcggcggtgg gggtgcgccc
     2041 gcccccggac cgccaaaacg gagccactct agtcactccc agccgggcgg cgccgggccg
     2101 aaaggacggt ggcggcggcg agggcggcgg tctccgcccg gaggacgagg ggcccgagcc
     2161 ccaggcgcgc ccacggctgc agcgcctcga cgtcggccgc cgtgagcccg ccctccggcc
     2221 cgacgacgac caggatctcg cccgcggccg gcgcccccag gccctcggcg ggcccgccgc
     2281 cccgctcggc caccacgatc cccggatggc cggccaggcc ggccaggggc cgcagttcct
     2341 ccaccgccgg caaccgggcc cggcggcact ggcgggcggc ctcccgggcg atccggcgcc
     2401 agcgctcggc cgccgtcgcc gcccgggcct cgtccgggcg ggcgacggat cgttccgcca
     2461 ccaccggcac gatgcggtcg acgcccagct cggtcagctt ctggacgacg agctccggct
     2521 tgtcgccctt ggtcagggcg aaggccacgg cgaggcgggg ggcgagctcg ggctcccgct
     2581 ccggcgggcc gacggcgtcg aggtggacgg cggcgccccc gatcccggtg atgcggtagg
     2641 ggcgccacag accggagccg tccgccacgg tcacggtctc accggcccgc aggcgcagga
     2701 cgcggccgag gtggtggccg tcgtcgccgg tgacgtcgag ccggtcgacg agctcggagg
     2761 ccgactccac gaagatgtgg gcggaggctc cgacgtcggc cggccaacgc tccgggggac
     2821 actccccggc ccccggggcc atgagctact ggaaggcgct cttgatgcgg gagaagaagc
     2881 cctcctcgcg gggggcgacc tcctcgcccc gcagctcggc cagccggcgg acgagttgcg
     2941 cctcctcggc cgagagcttc tcgggcacca cgacctcgac gctgacgatg aggtcgcccc
     3001 ggccccggcc ccgcagcgcc ggcacgcccc ggccccgcag ccggaagacc cgccccgtct
     3061 gggtaccggc cgggatcagc agatcctcct cgccgtcgag cgtctcgatg cggaggtggg
     3121 cgccgagcgc cgcctgggtc atcggcagcc ggaggacgtg gaggaggtcg tcgccgtcgc
     3181 gctgaaaccg ggggtggggt cgcacggcga tcgacacgta gaggtcgccg ggctcgccgc
     3241 cccggggggc ggccggcccc cgcccggcca gccggaggcg ctgcccgtcg tcgatcccgg
     3301 ccgggacctg gacctcgacg gtggcgggga gcgtgacccg cccgtcgccc cggcagtcgc
     3361 gacagggcga gaggatctcc cgccccgtcc cccggcaggc agagcagggg gtggcggtca
     3421 tcatctggcc gaggatcgtc cgccggaccg tgcggacctc gccggcaccg ccgcaggtgc
     3481 gacacgtcga cggatgggtg ccgggctcgc agcccgagcc gccgcagcgc tcgcactcca
     3541 ccggcatgcg cagctccacc ggcttcgtgg ccccgaacac cgcctcttcg aggtcgagca
     3601 cgaggtggac ctcggcgtcg ggcccccggg ccggccccgc cgggccgcgg gcgccgccga
     3661 acccgccgcc gaagaaggcg tcgaagaggt cggagacgcc gaagtcgaac ccgcccatcc
     3721 ccggcccgcc cgggccggcg ccgacgccct cgggaccgta catgtcgtag cggcggcgct
     3781 tctcggggtc gcgcagggtg tcgtaggcga ccgagatctc cttgaagcgg gcctcggcgg
     3841 ccgggtcgcc gtcgttggcg tcggggtggt actggcgggc gaggcgccgg taggccttcc
     3901 tgatctcgtc gtcgctggcg ccgcggtcga taccgaggac ctcgtagaag tcggtgggca
     3961 tcgtgggatc agccgggcgg ggagaggtgc tcgccgaggc ggcgggagac ggcggccacg
     4021 gcggccatgg cctgggggta gttcatgcgg gtcgggccga ggatgccgac cgtcccggcc
     4081 gcccggccct cgacgtcgaa gcgggcgagg acgacggagc actcccgcag gtcctccaga
     4141 tggttctccg acccgatccg gacggtgacg ccctggtcga tcaggtcccg cacgaggctc
     4201 accacgaggt actggtgctc gaggacctcg aggagccggc cgacggtctc gccggcggtg
     4261 aaggcgtcga gctcggcggc gatgcggctc gcccccccga cgaacaccgg ctcggtcggc
     4321 cgcccctcgg cgaagcgggc cacgagggcg tcgcgggcct ggcgggtgag gacgtcggtg
     4381 gccgcgtcac cggtcggccg ggggacgggc aggtcggcga aggaggcgtc gcggaggtgg
     4441 gtctccagaa cggcggtggc ggcgccgatc cggctctcgt cgacctcggc gccgagctcc
     4501 aggaactgcc gctcgacgtg gccgttggag agcacggcca ccaccagcaa cgacgtctcg
     4561 tggagccgga cgagctggac gctgcggacc cgggcggcgt cgggctgggg cccgaccacg
     4621 accgcggcgt ggtcggtgat gcgggacagc agaaggctcg tctcgtggag catgtcctcc
     4681 agggcgtggt gggcggtggc gaagaagctc gtcacctcct ggcgggcgcc gggctgcagc
     4741 tccttgcggg cgaggtggtc gacgaagtgg cggtagccct tgtcggtagg aacccgcccg
     4801 gccgacgtgt gggggtgggt gacgtacccc tcccgctcca ggagggccat ctcgttgcgg
     4861 accgtggcgc tcgacacccc gagccccgtc ccgcgggcga ccgtgttcga cccgaccggc
     4921 tgaccggtct cgacgtactc ctcgatcagg gccttgagga tggcggcctt gcgttcgtcc
     4981 atggcgatgc ccgaagttta ccgaccggcc gcgccccgac agcaccctgg ggcgccgctc
     5041 agcagccggt tcaggccgat cgggagccgg ttcgggccga cagcagccgg gtcgtggcct
     5101 cgttggccag gagccggccc ttgggcgtga ggacgaaccg gtcgccgcag cgttcagcga
     5161 ggccgtcgac ggcgaggccg ccggccgccg ggcccgccgg gacgccgcgc cgggtgcgca
     5221 gggcgagcat ggccgcctcc cgctcccggt ccgcgtcgtc gaggacctcg tgccccccct
     5281 cggccgaag
//
LOCUS       DATGJT010000322         2527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1180695, whole genome shotgun sequence.
ACCESSION   DATGJT010000322 DATGJT010000000
VERSION     DATGJT010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180695"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..467
                     /locus_tag="VKX24_05580"
     CDS             <1..467
                     /locus_tag="VKX24_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07986.1"
                     /translation="APVPETLSVGDPERGISLVRLQRFDAAGNSSELTFSPGVLYLPL
                     AIVPGEEWDAVGVDPRTGSVLEHRAKVVKRERVDACGDVVDGWAVEATQTFSGPGPAG
                     SAPARSYRYIVAPQLGGILISEAIHTTTAQGTTDATLSLGQLQPSPLPGAAK"
     gene            464..>2527
                     /locus_tag="VKX24_05585"
     CDS             464..>2527
                     /locus_tag="VKX24_05585"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ07987.1"
                     /translation="MNGARRAVLGWVLAVMAIALFTQVILPGAGGAGRGTPGAILFRG
                     LVYGLVNALTAAGIILVYRTLRVINFAQTAIGAAGAILTFDFVQYTKVPFALAFVLGL
                     GLSALVGVALDLSLVRRFFRAPRLVLTVVTIVVAGFLSQTSLNLVGRLPFFPRAETLS
                     VTQVLGTRPLHDRLPFPGFHFRIGGYGIPFGFPEVFAVEVAVLLLLALAAFFRFTRSG
                     VAVRAMAENTERAALLGISVGRLSTLVWALAGLLGGAGVTLTGVLTQPGAAAGFAPGV
                     LLPALAAAVVGRMRSLPATVFAAVAISVVTQALQFSLDKDKALVDLGLLLLIAAGLLF
                     QQRHALRGGGDEGASAWQASEEQRPIPKELLTVPSVRITRRVLVVLGLAFVVVYPFVA
                     STGQTNLGGVIALNAIVALSLVVLTGWAGQVSLGQFAFVAVGAVVAGALTARVGLSFW
                     FAVPLAAAFTAAFAVAVGLPALRIRGLFLAVTTFAFAVAVRSLLFEPRYFGWLLPGAV
                     DRPTLFFFDFGDERSMYFLCVAALVASIVVVLNVRKSRFGRVLIALRESEQNVAAFGI
                     AAVRMRLAAFAFSGALAGFAGAVFAHQQRGLNPESFAAPASIEIFVLAVLGGIGSVNG
                     ALLGAVYFNATRYFIHAPLLGGLVGFGGTLLLLYVSPGGLVSLLAQLRDACLRIVAQR
                     RQMVVP"
BASE COUNT          235 a          991 c          860 g          441 t
ORIGIN      
        1 aggccccggt tcccgagacg ctctccgtcg gcgaccccga gcgcggcatc tcgctcgtcc
       61 ggctgcagcg cttcgatgcc gccggcaact ccagcgagct cacgttctcg cccggcgtgc
      121 tgtacctccc gctggccatc gtccccggag aggagtggga cgccgtcggc gtcgatcccc
      181 gcaccggttc ggtgctggag caccgggcca aggtggtgaa gcgggagcgg gtcgacgcct
      241 gcggcgacgt cgtggacggg tgggccgtcg aggcgacgca gaccttctcc ggtcccggcc
      301 cggccggctc ggcccccgcc cgcagctacc gctacatcgt cgccccccag ctcggcggga
      361 tcctcatcag cgaggcgatc cacaccacca cggcccaggg gaccaccgac gcgacgctgt
      421 cactgggaca gctgcagccc tcgccgctgc cgggagccgc caagtgaacg gggcgcgccg
      481 ggccgtgttg ggctgggtgc tggcggtgat ggccatcgcc ctgttcaccc aggtgatcct
      541 gcccggcgcc ggcggcgccg gccggggaac gccgggcgcc atcctcttcc ggggcctcgt
      601 ctacggcctc gtcaacgccc tcaccgccgc cggcatcatc ctcgtctacc ggacgctgcg
      661 ggtcatcaac ttcgcccaga cggccatcgg cgccgccggc gccatcctga ccttcgactt
      721 cgtgcagtac acgaaggtgc ccttcgccct ggccttcgtg ctcgggctgg ggctctcggc
      781 gctggtcggc gtggccctcg acctctcgct ggtccggcgg ttcttccggg ctccccggct
      841 cgtgctgacc gtggtcacga tcgtggtggc cgggttcctg tcgcagacgt cgctcaacct
      901 cgtcggccgg ctgccgttct tcccccgggc cgagacgctc tcggtcaccc aggtgctcgg
      961 cacccggccg ctccacgacc ggctgccgtt ccccggattc cacttccgga tcggcggcta
     1021 cggcattcct ttcggcttcc ccgaggtctt cgccgtcgag gtggcggtcc tgctcctgct
     1081 ggcgctggcg gcgttcttcc gcttcacccg ctccggcgtg gccgtgcggg ccatggccga
     1141 gaacaccgag cgggccgccc tgctcggcat cagcgtcggc cggctgtcga cgctggtctg
     1201 ggcgctggcc gggctcctgg gcggggccgg cgtgacgctg accggcgtcc tcacccagcc
     1261 gggggcggcg gcgggcttcg ccccgggcgt gctgctcccg gcgctggccg ccgccgtcgt
     1321 cggccgcatg cggagtctcc cggccaccgt gttcgccgcc gtcgccatct cggtggtgac
     1381 ccaggcgctg cagttctccc tcgacaagga caaggcgctg gtcgacctcg ggctgctcct
     1441 gctcatcgcc gccggcctgc tcttccagca gcgccacgcc ctccggggcg gcggcgacga
     1501 gggggccagc gcctggcagg ccagcgagga gcagcggccg atcccgaagg agctgctgac
     1561 ggttccctcc gtccgcatca cccggcgggt gctggtcgtg ctcgggctgg ccttcgtggt
     1621 cgtctacccg ttcgtcgcct ccaccgggca gacgaacctc ggcggtgtca tcgccctcaa
     1681 cgccatcgtc gccctctcgc tggtggtgct caccggctgg gccggccagg tcagcctcgg
     1741 ccagttcgcc ttcgtggccg tcggcgccgt ggtggccggc gccctcaccg cccgggtcgg
     1801 gctgtcgttc tggttcgccg tcccgctggc cgccgccttc accgccgcct tcgccgtcgc
     1861 cgtcggcctg ccggcgctgc gcatccgggg gctgttcctg gccgtgacga cgttcgcctt
     1921 cgccgtggcc gtccgctccc tgctgttcga gccccgctac ttcggctggc tgctgcccgg
     1981 cgccgtcgac cggccgacgc tgttcttctt cgacttcggc gacgagcggt cgatgtactt
     2041 cctctgcgtg gcggccctgg tggcctcgat cgtggtggtc ctcaacgtcc gcaagagccg
     2101 cttcggccgg gtgctgatcg ccctgcggga gagcgagcag aacgtcgccg ccttcggcat
     2161 cgccgccgtc cgcatgcggc tggccgcctt cgccttctcc ggcgcgctgg ccggcttcgc
     2221 cggcgccgtg ttcgcccacc agcagcgggg cctcaacccc gagagcttcg ccgcgccggc
     2281 cagcatcgag atcttcgtgc tggccgtcct cggcggcatc ggctcggtca acggtgcgct
     2341 gctcggcgcc gtctacttca acgccacccg ctacttcatc cacgcgccgc tgctcggggg
     2401 cctcgtcggc ttcggcggga cgctgctgct gctctacgtc tcccccggcg gcctcgtgtc
     2461 gctgctggcc cagctgcgcg acgcctgtct gcgcatcgtg gcccaacgcc ggcagatggt
     2521 cgtgccg
//
LOCUS       DATGJT010000323         4087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_250523, whole genome shotgun sequence.
ACCESSION   DATGJT010000323 DATGJT010000000
VERSION     DATGJT010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4087
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250523"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..1494)
                     /locus_tag="VKX24_05590"
     CDS             complement(4..1494)
                     /locus_tag="VKX24_05590"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HLJ07988.1"
                     /translation="MDVIGRWTGRILLGLAAAVLVVVGIGPLTGRYRLATVLTGSMAP
                     GMPVGSVAVLVPEDPAAVRVGDVITFQAPTPDHRTVTHRVVEIVESGHHPVLRTRGDA
                     NPVDDPWTARLTGDRAWRRVSVVPFAGKAIRALRSSAVHRLTVRVVPVVLFTSVLLAI
                     WWPGRLSRRQTGVVLLVVAVLAATPAALAAFTGTTTATANFAAAADWLPPSVGSTVIA
                     KQTGYLAGALKQGGVYYVYANDADSGNPASGVSTVTADVSAITTGSTAVTLTAGSYSV
                     NGVSYGYRSGLLTANGTLSGTKNYTITSTDVQAHAQTQSGYSVTVDNTRPTATDIQTT
                     NHAGGTAGKAETGDTLVYTFSEPLDPQSVIGGWTGASTSVTVHLEDGGCVLNLLVQIC
                     ADDSLEVYSGASPLATLGGPVDLKDPNYVGGGLIGTSADAVFNATMAESGSSITVTLG
                     SLTSGQADTGGSTLMTWTWSGGPYDAAGNVATGNSITESGGAAKEF"
     gene            complement(1513..2148)
                     /locus_tag="VKX24_05595"
     CDS             complement(1513..2148)
                     /locus_tag="VKX24_05595"
                     /inference="COORDINATES: protein motif:HMM:NF023806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TasA family protein"
                     /protein_id="HLJ07989.1"
                     /translation="MRGTVNQTVLGGTGRKLLLTLGALGVAGALAGMGTFATFTATTS
                     ASQSVSSGTVVIALGNTGASTNRLTVNASGLVPGDTIQRSFDLSNTGSQDLASIALTT
                     SASPSSLLDTDGTNGLQMVIDRCSAAWTESGSSPAFSYSCSGSTTTIVTSRAVIQSSL
                     GMAGLSALTSGGTDHLRLTLTFPSSAGATFQGLSSTLTYSFLGTQRAGTAH"
     gene            complement(2133..2687)
                     /locus_tag="VKX24_05600"
     CDS             complement(2133..2687)
                     /locus_tag="VKX24_05600"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HLJ07990.1"
                     /translation="MSTAVLDVAVARPVPALGPAPVAARLILRAVLGTVVLGLLFLVV
                     GPHVYPVESFYVRTGSMTPTIPVGSLVIATRAPAEKLGVGDVIVFQRPDRPGTMVVHR
                     INAVVMTANGRAFITKGDANGTPDGWQVAATGEGWKAVYSMRRAGFLVGWLHTALSRR
                     GWLGSFAVVLAIWALITIWECEEP"
     gene            complement(2696..3394)
                     /locus_tag="VKX24_05605"
     CDS             complement(2696..3394)
                     /locus_tag="VKX24_05605"
                     /inference="COORDINATES: protein motif:HMM:TIGR04088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SipW-dependent-type signal peptide-containing
                     protein"
                     /protein_id="HLJ07991.1"
                     /translation="MKLSLKRKILLSLGVVAGIGALAGAGTFASFTAQTTNPNNKFAD
                     GTLVLSNTANTGQACLSTNAGDPSVNDNASCDVAFNLSVQKPGDSDTADIALQDVGSL
                     AASALTTFGACTDGNSSGETYHGSGNPCSEIQFYVQQWSDAAHTTPTHCLYGGALVAN
                     TCDFTDTSQTLRAFVTAHHDVTTGLGAGALDAFHGAADTTWITIGVQLPSTADNTFQG
                     RSATLALSWHLVQV"
     gene            complement(3507..3944)
                     /locus_tag="VKX24_05610"
     CDS             complement(3507..3944)
                     /locus_tag="VKX24_05610"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ07992.1"
                     /translation="MRVEEVPAQATHDLRWRVLRNRRPGAPVVFPEDARPGGFHLAVC
                     ADGVVVAVASFSPEPTPYRPGRDAVHLRGMAVDPPFQRHGLGRMLVATVVERLRRDGV
                     GVLWCNARDSASGFYARLGFETVGEGFVLPESGMAHHVMLRDL"
BASE COUNT          572 a         1372 c         1550 g          593 t
ORIGIN      
        1 aggtcagaac tccttggcgg cgccgccgga ctcggtgatg ctgttgccgg tggccacgtt
       61 cccggccgcg tcgtacgggc cgcccgacca ggtccacgtc atcagcgtgc tgcccccggt
      121 gtcggcctgc ccgctggtca ggctgccgag cgtgacggtg atcgagctcc ccgactccgc
      181 catcgtggcg ttgaagaccg cgtcggccga cgtgccgatg aggccgccgc ccacgtagtt
      241 cgggtccttc aggtcgacgg ggccgccgag cgtcgccagc gggctggccc cgctgtagac
      301 ctcgaggctg tcgtcggcgc agatctggac caggaggttc aggacgcacc cgccgtcctc
      361 caggtggacg gtgacgctgg tcgaggcacc ggtccagccg ccgatcaccg actgcgggtc
      421 gagcggctcg ctgaaggtgt agacgagcgt gtcacccgtc tccgccttgc cggcggtgcc
      481 gccggcgtgg ttggtcgtct ggatgtcggt cgctgtcggg cgggtgttgt caacggtcac
      541 gctgtagccg ctttgcgtct gggcgtgggc ctgcacgtcg gtcgacgtga tcgtgtagtt
      601 cttcgtgccc gacagcgttc cgttggcggt gaggagcccg gagcggtagc cgtagctgac
      661 tccgttcacg gagtacgagc cggccgtgag ggtaacggcg gtcgaaccgg tggtgatggc
      721 actgacgtcg gcggtgacgg tcgacacgcc gctggccggg ttcccgctgt cggcgtcatt
      781 ggcgtagacg tagtacacgc cgccctgctt gagggcgccg gccaggtatc ccgtctgctt
      841 ggcgatgacc gtgctgccga ccgagggcgg gagccagtcg gccgccgcgg cgaagttggc
      901 ggtggccgtg gtcgtgccgg tgaaggccgc cagcgcggcg ggggtggcgg cgaggacggc
      961 gacgaccagc aggacgacac cggtctggcg tcgggaaagc cggcccggcc accagatggc
     1021 cagcagcacc gacgtgaaca gcacgaccgg cacgacccgg acggtaaggc ggtgcacggc
     1081 gctcgaccgg agggcccgga tcgccttccc ggcgaagggg acgacggaca cccgccgcca
     1141 ggcccggtca ccggtcaacc gggccgtcca ggggtcgtcg accgggttgg cgtcacccct
     1201 ggtccgcagg acgggatggt gtcccgattc cacgatctcg accacccggt gggtcaccgt
     1261 ccggtggtcc ggcgtcggcg cctggaaggt gatgacgtcc ccgacccgca ccgccgccgg
     1321 gtcctcggga acgagcacag ccaccgagcc gaccggcatg cccggcgcca tgctgccggt
     1381 cagcaccgtg gccagacggt accggccggt cagcggcccg atgccgacga cgaccaggac
     1441 cgcggccgcc agaccgagga ggatccggcc cgtccagcgg ccgatgacgt ccatggcccg
     1501 gcgtcgccgt ctctagtggg cggtgcccgc ccgctgcgtt ccgaggaagc tgtaggtcag
     1561 cgtcgagctg aggccctgga acgtggcccc ggccgaggac gggaacgtca gcgtcaggcg
     1621 caggtggtcg gtgccaccgg aggtgagggc gctcagcccg gccatgccca gcgaggactg
     1681 gatgaccgcc cggctggtga cgatcgtcgt cgtcgagccg ctgcagctgt agctgaaggc
     1741 gggcgaggac cccgactcgg tccaggccgc cgagcagcgg tcgatcacca tctgcaggcc
     1801 gttcgtgccg tcggtgtcga gcagcgacga cggcgaggca ctggtggtga gggcgatcga
     1861 ggccaggtcc tggctcccgg tgttggagag gtcgaacgaa cgctggatcg tgtcaccggg
     1921 cacgaggccc gaggcgttga cggtcaaccg gttggtggag gcgccggtgt tgccgagggc
     1981 gatcaccacc gtgccggacg acaccgactg gctggcgctg gttgtcgccg tgaacgtggc
     2041 gaacgtgccc atgccggcca gggcgccggc cacgccgagg gctccgaggg tcagcagcag
     2101 tttccggcct gttccgccga ggacggtctg gttcacggtt cctcgcattc ccagatggtg
     2161 atgagggccc agatggcgag gaccacggcg aaggagccga gccagccgcg gcggctgagg
     2221 gcggtgtgca gccagccgac gaggaatccc gcccggcgca tcgagtacac ggccttccag
     2281 ccctcgccgg tggcggccac ctgccagccg tcgggcgtgc cgttggcgtc gcccttggtg
     2341 atgaacgccc ggccgttcgc cgtcatgacg acggcgttga tccggtgcac caccatcgtc
     2401 cccggccggt cggggcgctg gaagacgatg acgtcgccga cgcccagctt ctcggccggt
     2461 gcccgggtgg cgatcaccag cgagccgacc gggatcgtgg gcgtcatgct gccggtgcgg
     2521 acgtagaagc tctcgaccgg gtagacgtgg ggcccgacga cgaggaacag caggccgagc
     2581 acgacggtcc ccagcaccgc ccggaggatc aggcgcgccg ccaccggtgc cggcccgagg
     2641 gccggcaccg gtcgggcgac agcgacgtcg aggaccgccg tgctcatgtc ctgcactaca
     2701 cctggacgag gtgccagctg agggccagcg tcgccgaccg gccctggaag gtgttgtcgg
     2761 cggtggacgg gagttggacg ccgatggtga tccacgtcgt gtccgccgcg ccgtggaagg
     2821 cgtcgagcgc acccgcgccg aggccggtgg tcacgtcgtg gtgggcggtc acgaaggccc
     2881 ggagcgtctg gctcgtgtcc gtgaagtcac aggtgttggc aaccagcgcc ccgccgtaca
     2941 ggcagtgggt cggcgtggtg tgtgccgcgt ccgaccactg ctggacgtag aactggatct
     3001 cgctgcaggg gttccccgag ccgtggtagg tctcgcccga cgagttgccg tcggtgcacg
     3061 cgccgaacgt ggtcagcgcc gaggcggcca ggctgccgac gtcctggagg gcgatgtcgg
     3121 cggtgtccga gtcgcccggc ttctggacgc tcaggttgaa ggccacgtca catgacgcgt
     3181 tgtcgttgac actgggatcg ccggcgttcg tcgacaggca cgcctggccg gtgttggcgg
     3241 tgttgctcaa caccagcgtg ccgtcggcga acttgttgtt cgggttggtg gtctgggcgg
     3301 tgaaagaggc gaaggtcccg gcgccggcga gggcgccgat tccggcgacc acccccaggc
     3361 tcaggagaat tttccgtttc aggctgagct tcatcgactg ctcctcgatg catccgtgcg
     3421 gcgagggata ttgcgccgtc gatccgcccg atcggcgccg aggcgaggag gttcaggccc
     3481 cggcgggcga cagtgatcga tttgcctcag agatcccgca gcatgacgtg gtgcgccatg
     3541 ccgctctcgg gcaggacgaa cccttccccc accgtctcga agccgagacg ggcgtagaaa
     3601 ccggaggcgc tgtcacgggc gttgcaccac agcaccccga cgccgtcgcg gcgtaggcgc
     3661 tcgaccacgg tggccacgag catccggccg agcccgtggc gctggaacgg ggggtcgacg
     3721 gccatccccc ggaggtggac ggcgtcgcgt cccggccggt acggcgtcgg ctcggggctg
     3781 aagctcgcca ccgccacgac cactccgtcg gcgcaaaccg cgaggtggaa gccgccgggc
     3841 cgggcgtctt cgggaaagac gaccggcgcc ccgggccggc ggttccgcag gacgcgccag
     3901 cggaggtcgt gggtcgcctg ggccgggacc tcctcgaccc gcacctcgcc ggccccggcc
     3961 ccagcgcgtc agacggcgcc gcggtcgacg gcgtcgccga aggcccacac ggtgccgtcg
     4021 gcggcggcca gccagtaccc gtggcctgcg ggcgtggccg ccagcccgac gacgggcagg
     4081 ttgggcg
//
LOCUS       DATGJT010000324         2770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_456977, whole genome shotgun sequence.
ACCESSION   DATGJT010000324 DATGJT010000000
VERSION     DATGJT010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456977"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VKX24_05615"
     CDS             complement(<1..470)
                     /locus_tag="VKX24_05615"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HLJ07993.1"
                     /translation="MLAAVAPWKHAVVLVVAIAGGFVNAIAGGGSLLTFPTLVWVGVA
                     PVAASATNTVGLWPGSLGGVVGFRRHLPERSVIMLLAVPSLAGGILGAVLLLHTPQRI
                     FEGLAPVLVLLATLLLAVQEPLSGLLRQRSSLVGQRTAGFATAAVVFQFVVGVYG"
     gene            600..1976
                     /locus_tag="VKX24_05620"
     CDS             600..1976
                     /locus_tag="VKX24_05620"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLJ07994.1"
                     /translation="MADMPSPMWSDTTLPPETPGPDAPLPPESPGRPAEPASGDRGPA
                     FQWGPPVPPPAAPPTEPPSFPSDPASEPPAPPAARPSLPWVEAAGPGRRFLAGVVVGA
                     LVGALVAGGIVARSHHNATASPAVNSKAVAAARASLLAHPGDVHQIVQAVGPSVVSIQ
                     TQAMGVGAFLQAVPQEGAGSGFVLSPDGVIVTNNHVVAGASTITVTLADGRKLAGRVL
                     GRDATADLAVLKVDASGLPAVKIGSSSALVVGDSVVAIGNALALDGGPTVTEGIVSAL
                     DRTISAGDQGSTGTSETLRHVLQTDAAINPGNSGGPLLNAAGEVVGINTAVAGDAQNI
                     GFALAIDKAMPIINQLKTGQTPQQPFLGVATVTLTPGIQRQLGLDVGKGAVVASVTPG
                     SGADQAGLAQGDVITAIGGKDVSSADDVTAAVSDRKPGDTIDITIDRNGATRTVTAKI
                     GSRSGAGG"
     gene            2049..>2770
                     /locus_tag="VKX24_05625"
     CDS             2049..>2770
                     /locus_tag="VKX24_05625"
                     /inference="COORDINATES: protein motif:HMM:NF018435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HLJ07995.1"
                     /translation="MDGVSIDLGTANTVVWDSTEGLVFNEPTMMALSFDGGRHSDVIG
                     IGRAAEELVGRAPDGVEVVRPLRDGVITDLETTRRFLREVLHGIAPTWWQRRRLSVVI
                     GVPAGATALERRALLEAAEEAGIGRAQLLPEPVCGAIGCGIDPLRPRTHLVVDIGGGT
                     SEVAAFGSGGMLTYRSSPIAGDEMTLALYQYIRSEHQLIVGERMAEDVKIRASSDPSP
                     TMVVEGRDAATARPRVVNLSSE"
BASE COUNT          403 a         1064 c          974 g          329 t
ORIGIN      
        1 ccgtagacgc cgacgacgaa ctggaagacc acggcggcgg tggcgaaccc ggcggtgcgc
       61 tgcccgacga ggctgctgcg ctggcgcagg aggccggaca gcggctcctg caccgccagc
      121 aggagggtgg ccaacaggac gaggaccggg gcgagcccct cgaagatccg ctgcggggtg
      181 tgaagcagca ggacggcgcc gaggatccca cccgccaggg aggggacggc cagcagcatg
      241 atcaccgacc gttccggcag gtggcggcgg aagccgacga cgccccccag gctcccgggc
      301 cacagcccca cggtgttggt ggcgctggcc gccacagggg cgaccccgac ccagaccaag
      361 gtcgggaacg tcagcaggct gccgccgccg gcgatggcgt tgacgaagcc gccggcgatg
      421 gcgacaacga gcacgacggc gtgcttccac ggagccacgg cggcgagcac gcccggacgc
      481 tacgacgccg cgcccgtctt taccgaacct ttgcctccgc tctctcgatg cttgaggcgc
      541 cgaggcggag actcgtgggt aggccggggg aacccggact gacaggagga acgacaccga
      601 tggccgacat gccttccccc atgtggtcgg acaccaccct gccgcccgag accccggggc
      661 ccgacgctcc cctgcccccc gagtctcccg gccggcccgc cgagcccgcc tccggcgacc
      721 gcgggccggc cttccagtgg ggtcctcctg tccctccccc ggccgcgcct ccgaccgagc
      781 caccgtcgtt cccttccgac ccggcctcgg agccgcctgc gccgccggcc gcccgacctt
      841 ccctcccctg ggtcgaggcg gccggccccg ggcggcgctt cctggccggc gtggtcgtcg
      901 gtgcccttgt cggcgccctc gtggccgggg ggatcgtcgc ccgcagccac cacaacgcca
      961 cggcgtcccc cgccgtcaac tccaaggcgg tggccgccgc ccgggcgtcg ctcctggccc
     1021 accccggcga cgtccaccag atcgtccagg ccgtcggccc gtccgtcgtg tcgatccaga
     1081 cgcaggccat gggcgtcggc gccttcctcc aggcggtgcc ccaggagggg gcgggcagcg
     1141 gcttcgtgct cagccccgac ggcgtgatcg tgaccaacaa ccacgtcgtg gccggcgcca
     1201 gcaccatcac agtcacgctg gccgacgggc gcaagctcgc cggccgcgtc ctcggccggg
     1261 acgccaccgc cgacctcgcc gtcctcaagg tcgacgcctc ggggctgccg gcggtgaaga
     1321 tcggcagctc cagcgccctc gtcgtcggcg actccgtcgt ggccatcggc aacgccctgg
     1381 ccctcgacgg cggcccgacg gtgaccgagg gcatcgtctc cgccctcgac cgcacgatct
     1441 cggccggcga tcagggctcg accggcacca gcgagacgct ccgccacgtc ctgcagaccg
     1501 acgccgccat caaccccggg aactccggcg gcccgctgct caacgccgcc ggcgaggtcg
     1561 tcggcatcaa caccgccgtg gccggcgatg cccagaacat cggcttcgcc ctggccatcg
     1621 acaaggcgat gccgatcatc aaccagctga agaccggcca gacgccgcaa cagcccttcc
     1681 tcggcgtggc gaccgtcacg ctcacgccgg gaatccagcg ccagctcggc ctcgacgtcg
     1741 gcaagggcgc cgtcgtggcc agcgtcactc ccggctcggg ggccgatcag gccgggctcg
     1801 cccagggcga cgtgatcacc gccatcggcg ggaaggacgt gagcagcgcc gacgatgtga
     1861 ccgccgccgt ctccgaccgg aagccgggcg acacgatcga catcaccatc gaccgcaacg
     1921 gcgcgacccg caccgtcacg gccaagatcg ggagccgctc cggcgccggc ggctgaggtt
     1981 ccaaaccctc cccaacgggt agttgaccca gggaacatct gtcaggatcg gcttacgggg
     2041 agggacgcgt ggacggcgtc agcatcgacc tgggtacggc caacacggtc gtgtgggaca
     2101 gcaccgaagg gctcgtcttc aacgagccga cgatgatggc cctgagcttc gacggtgggc
     2161 ggcactccga cgtgatcggc atcggccggg ccgccgagga gctcgtcggg cgggcgccgg
     2221 acggcgtgga ggtcgtccgc ccgctgcggg acggggtcat caccgacctg gagaccaccc
     2281 ggcggttcct gcgggaggtg ctccacggca tcgccccgac gtggtggcag cggcggcggc
     2341 tgtcggtcgt catcggcgtg ccggccggcg ccacggcgct ggagcggcgg gcgctgctcg
     2401 aagcggcgga ggaggccggc atcggccggg cccagctgct ccccgaaccg gtctgcggcg
     2461 ccatcggctg cggcatcgac ccgctgcggc cccgcacgca cctcgtggtc gacatcggcg
     2521 gcggcacctc ggaggtggcc gccttcgggt ccggcggcat gctcacctac cggtcgtcgc
     2581 cgatcgccgg cgacgagatg accctggccc tctaccagta catccgcagc gagcaccagc
     2641 tgatcgtggg cgagcggatg gccgaggacg tcaagatccg ggcgagttcc gacccgagcc
     2701 ccacgatggt ggtggagggc cgggacgctg ccaccgcccg gccgcgggtc gtcaacctct
     2761 cgtccgagga
//
LOCUS       DATGJT010000325         2203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_250688, whole genome shotgun sequence.
ACCESSION   DATGJT010000325 DATGJT010000000
VERSION     DATGJT010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250688"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..1322)
                     /locus_tag="VKX24_05630"
     CDS             complement(144..1322)
                     /locus_tag="VKX24_05630"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012784175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HLJ07996.1"
                     /translation="MTTAVIVDAVRTPGGKRNGKLRNWHAVDLASEPLKALQARNGFD
                     PAQVDDVITGCVMQVGEQSLNIGRSAVLAADWPESVPATTVDRQCGSSQQAVHFAAQG
                     VMAGAYDMVVASGVEAMTRVPMGSSVVREVGFPFGPRVGARYAPVGGLVSQGIGAEMI
                     ADKWGLSRQDLDAFGARSQQNAARATAEGRFEREIIGIPIRDDEGNATDEVMTTDEGI
                     RPDTTVETLANLKPAFKEDGKITAGNSSQITDGASAALIMSEEKASALGYTPRARFVA
                     FAVTGADPVSMLTGPIPATKMVLERAKLTIDDIDLVEINEAFASVVLAWEKELHPDMA
                     RVNVNGGAIALGHPLGASGAKLLSTLLNELERTSGRYGLLTMCEGGGLANACIIERLG
                     "
     gene            1427..1888
                     /locus_tag="VKX24_05635"
     CDS             1427..1888
                     /locus_tag="VKX24_05635"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HLJ07997.1"
                     /translation="MSETAGGQAGPRNMDRWLGDGGMPLIGQVGAELERYGVDGEDLG
                     WVEGSFNPTELACNTGGTVQAGVHSLLLDACINFAINAALPRGDRARATLELKTETMR
                     PAAPGTTYRLRGEVVRMAKQVAYGEATLRGPDGELCSRATGTFLLHRAGAG"
     gene            complement(1902..>2203)
                     /locus_tag="VKX24_05640"
     CDS             complement(1902..>2203)
                     /locus_tag="VKX24_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007458030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pirin-like C-terminal cupin domain-containing
                     protein"
                     /protein_id="HLJ07998.1"
                     /translation="NALAYGLGGRGTVSADRRPLAVGQLAVHGPGDALALAADRAQDE
                     SVGAFDVLILGGAPIREPVAAYGPFVMNTRAEIAQAFEDYQSGRLGTVPADHIGH"
BASE COUNT          281 a          766 c          852 g          304 t
ORIGIN      
        1 cccactcgtc ccaggcaccg ctcatcccgc cagcgtgaac cccgggggct gaccggtcaa
       61 gggcgacggc tccccggggg gttgcgcgtc gtccagggcc gaccggatcg ccggccccgg
      121 ggccgtcgcg gagggcctcc cgcctacccg aggcgctcga tgatgcaggc gttggccagc
      181 ccgccgccct cgcacatggt gagcaggccg tagcggccgc tcgtccgctc gagctcgttc
      241 agcagggtgg agagcagctt ggcccccgag gcgccgagcg ggtgaccgag ggcgatggcg
      301 ccgccgttca cgttgaccct ggccatgtcg gggtggagct ccttctccca ggcgaggacg
      361 accgaggcga aggcctcgtt gatctcgacg aggtcgatgt cgtcgatcgt gagcttggcc
      421 cgctcgagga ccatcttcgt ggccgggatc ggcccggtga gcatcgagac ggggtcggca
      481 ccggtgacgg cgaaggcgac gaagcgggcg cgtggcgtgt acccgagggc cgaggccttc
      541 tcctcgctca tgatcagggc ggccgaggcg ccgtcggtga tctgggagga gttgccggcc
      601 gtgatcttgc cgtcctcctt gaaggcgggc ttcaggttgg ccagcgtctc gaccgtcgtg
      661 tccgggcgga tgccctcgtc ggtggtcatg acctcgtcgg tggcgttgcc ctcgtcgtcg
      721 cggatcggga tgccgatgat ctcgcgctcg aagcggccct cggcggtggc ccgggccgcg
      781 ttctgctggc tgcgggcgcc gaaggcgtcg aggtcctggc gggagaggcc ccacttgtcg
      841 gcgatcatct cggccccgat gccctggctg accaggcccc cgaccggggc gtagcgggcg
      901 ccgacccgcg ggccgaaggg gaagccgacc tcgcggacga ccgaggagcc catcggcacc
      961 cgggtcatgg cctcgacgcc gctcgccacg accatgtcgt aggcgccggc catcaccccc
     1021 tgggcggcga agtggaccgc ctgctgggag gagccgcact ggcggtcgac ggtggtggcc
     1081 gggaccgact cgggccagtc ggcggcgagg acggcggagc ggccgatgtt gagcgactgc
     1141 tcgcccacct gcatgacgca gccggtgatg acgtcgtcga cctgggccgg gtcgaagccg
     1201 ttgcgggcct gcagggcctt cagcggctcg gaggcgaggt cgacggcgtg ccagttgcgg
     1261 agcttcccgt tgcgcttgcc cccgggagtg cggacggcgt cgacgatcac ggcggtggtc
     1321 atgagttctc ctcggaacac cgggccggcc cctgcccgcc cgaacgtcga cagactactt
     1381 gcccagcttg ggcccctgtc cgggccgccg ctagcgtcgc gatgcgatga gcgagacggc
     1441 gggcggacag gcggggcccc ggaacatgga ccgttggctg ggggacggcg ggatgccgct
     1501 catcggccag gtcggggccg agctcgagcg ctacggcgtc gatggggagg acctgggttg
     1561 ggtcgagggc tccttcaacc cgaccgagct cgcctgcaac accggaggga cggtccaggc
     1621 gggcgtccac tcgctgctgc tcgacgcctg catcaacttc gccatcaacg ccgccctgcc
     1681 gcggggggac cgcgcccggg ccaccctcga gctcaagacc gagaccatgc gcccggccgc
     1741 ccccgggacc acctaccggc tgcgggggga ggtcgtgcgg atggccaagc aggtcgccta
     1801 cggcgaggcc acgctgcgcg gccccgacgg cgagctgtgc agccgggcga ccgggacctt
     1861 cctcctgcac cgggccgggg ccggctaggg gccggcccgg gtcagtgccc gatgtggtcg
     1921 gcggggacgg tgccgagccg gcctgactgg tagtcctcga aggcctgggc gatctcggcc
     1981 cgggtgttca tcacgaacgg cccgtaggcg gcgaccggct cccggatggg agcccccccg
     2041 aggatgagga cgtcgaacgc accgacgctt tcgtcctggg cgcggtcggc ggcgagcgcg
     2101 agggcgtcgc ccggcccgtg gacggccagc tggcccaccg ccagcggccg gcggtcggcc
     2161 gacacggtgc cccggccgcc gagcccgtag gcgagggcgt tga
//
LOCUS       DATGJT010000326         3492 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1391156, whole genome shotgun sequence.
ACCESSION   DATGJT010000326 DATGJT010000000
VERSION     DATGJT010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391156"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VKX24_05645"
     CDS             complement(<1..202)
                     /locus_tag="VKX24_05645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ07999.1"
                     /translation="MQSPGAGRFPGLILTLRWAAVTVGAVLSLVDLRHSAPAMAATSL
                     LCLYAGARILRPLPRPDLRDVAP"
     gene            complement(208..1125)
                     /locus_tag="VKX24_05650"
     CDS             complement(208..1125)
                     /locus_tag="VKX24_05650"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLJ08000.1"
                     /translation="MDPTLLTFGAAAVAVGGVLVAQGLREPQVDAEAVLAELDTEPVV
                     LDEFTNRLKEPIAARLLRPLAGSLGEKIAGLVPRRRADQLRHRLLIAGVSAKVGPEEF
                     VVMQGIGFGAGVLLGLLLGEASGYHGFGLLRMIVVLAVMGVFAPVAWLRRKQDERQSS
                     IRRDLPDVLDLLAISVEAGVGFEGALEVVTRHFEGELAGEFGRTLREMELGLPRREAL
                     QNLKRRTEVTELSNFVLILVQADALGMPIGRVLRTQASEMRLKRRAWARERAARLPVK
                     IMFPLTVFILPALFVVILGPAAISIAHNL"
     gene            complement(1125..2084)
                     /locus_tag="VKX24_05655"
     CDS             complement(1125..2084)
                     /locus_tag="VKX24_05655"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLJ08001.1"
                     /translation="MIALVAALAVGAGLALSGVSFLQRAKERDEDLAAILQLPFGERD
                     VPIEAVTESRAALLERTVSLATDGLEHFNLMARVAGELERARLPLRPGEFVLAAGGGG
                     AGLGVVIFLGTGQALLGVISAVAGPFLAWNFVKFKVARRRKAFEAQLPDALGLIASSL
                     QAGHTALRAVQSMVEESEAPLSEEFERVVAETALGDPLVDALDRMSQRLDIEDLKMVV
                     QAIRIQQNVGGKLADLLHTLAEFMRAREEIRREVKVLTAEGRMSAWVLGAMPVGLFFA
                     VKTMSPGYLDPILRAPGVFALIGAAVSVAIGITMIMRMVRIDI"
     gene            complement(2081..>3492)
                     /locus_tag="VKX24_05660"
     CDS             complement(2081..>3492)
                     /locus_tag="VKX24_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011756552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HLJ08002.1"
                     /translation="DSTLEEGPKPARAARRVNAGWEGTKKRVRDLVLADLGPKLTGAK
                     RVGSELEKEVKAALDRALQREDVRISPSERSKFVAEVLSDILGYGPLDAPLADPTVTE
                     IMCNAYNQIWVERRGVIEPTGLAFTDDSQYRQVIDKIVSAVGRRVDESSPMVDARLPD
                     GSRVNAIIPPLSLNGPTLTIRKFADDPYTVADLINFGSMTMDLALFLEACVRGKLNVL
                     VSGGTGTGKTTTLNVLSSFIPERERIVTIEDAAELQLQQPHVVRLESRPANSEGRGEV
                     RIRDLVRNALRMRPDRIVVGEVRGGEALDMLQAMNTGHAGSITTVHANTPRDALARLE
                     TMVLMAGFDLPVRAIREQIASAINVIVQLERASDGVRRVVAVEEVQGLEGDVILLQQL
                     FHFVPRVSSDGRQIGEIEAAGLRPKFLDALVHSGVDLPASVFQAPVRPREVRPKTRSV
                     PSVAELIARSGGPVGGERR"
BASE COUNT          513 a         1221 c         1297 g          461 t
ORIGIN      
        1 ccggcgccac gtcccgcaag tccggccggg ggagtggccg caggatgcgg gcgccggcgt
       61 agaggcacag cagcgacgtc gcggccatgg ccggcgccga gtggcgcagg tcgaccagcg
      121 atagcacggc gccgacggtc accgccgccc accgcagcgt caggatgagc ccggggaacc
      181 ggccggcgcc gggcgactgc atcgggatca gaggttgtgg gcgatgctga tcgccgccgg
      241 cccgaggatg accacgaaca gcgccggcag gatgaacacc gtcaggggga acatgatctt
      301 gaccgggagc cgggccgccc gctcccgggc ccaggcccgg cgcttgagcc gcatctccga
      361 ggcctgcgtc cgcaggacgc gcccgatggg catcccgagg gcgtcggcct gcaccaggat
      421 cagcacgaag ttcgacagct cggtgacctc ggtgcggcgc ttgaggttct gcagcgcttc
      481 ccggcggggg agcccgagct ccatctcccg cagcgtgcgg ccgaattcgc cggccagctc
      541 gccttcgaag tgccgggtca cgacctccag cgcgccctcg aagccgacgc cggcctcgac
      601 ggagatcgcc aggaggtcga ggacgtcggg caggtcgcgc cggatcgagg actgccgctc
      661 gtcctgcttg cggcgcagcc aggcgacagg ggcgaagacg cccatgacgg ccaggaccac
      721 gatcatccgc aggaggccga agccatggta gcccgacgcc tcgccgagga gcaggccgag
      781 gaggacgccg gcgccgaagc cgatgccctg catgaccacg aactcctccg gccccacctt
      841 ggccgacacc ccggcgatca gcagccggtg ccgcagctgg tcggccctcc ggcgggggac
      901 gagcccggcg atcttctcgc ccagcgaccc ggccagcgga cggagcagcc gggcggcgat
      961 cggctccttg agccggttgg tgaactcgtc gaggacgacc ggttcggtgt cgagctcggc
     1021 cagcaccgct tcggcgtcga cctgcggctc ccgcagcccc tgggccacga gcacgccgcc
     1081 gacggccacg gcggccgccc cgaaggtgag cagtgtcggg tccatcagat gtcgatcctg
     1141 accatgcgca tgatcatcgt gatgccgatg gccaccgaga ccgcggcgcc gatgagggcg
     1201 aagacgccgg gggcccgcag gatcgggtcg aggtagccgg ggctcatggt cttgacggcg
     1261 aagaagaggc cgacgggcat ggcgccgagc acccaggccg acatgcgtcc ctcggcggtg
     1321 aggaccttga cctcccggcg gatctcctcc cgggcccgca tgaactcggc cagcgtgtgg
     1381 agcaggtcgg cgagcttgcc gccgacgttc tgctggatgc ggatggcctg caccaccatc
     1441 ttgaggtcct cgatgtcgag ccgctgcgac atgcggtcga gggcgtcgac cagcgggtcg
     1501 ccgagggccg tctcggccac cacccgctcg aactcctccg acagtggcgc ctcgctctcc
     1561 tcgaccatcg actggacggc ccgcagcgcg gtgtggccgg cctggagcga cgaggcgatg
     1621 agacccaggg cgtcgggcag ctgggcctcg aacgccttgc ggcgccgggc gaccttgaac
     1681 ttcacgaagt tccaggccag gaaggggccg gcgacggccg agatcacgcc gagcagcgcc
     1741 tgcccagtgc cgaggaagat caccacgccg agtccggcac cgccgccgcc ggcggcgagg
     1801 acgaactcgc cgggccgcag cgggaggcgg gcccgctcca gctcgccggc gacgcgggcc
     1861 atgaggttga agtgctcgag gccgtcggtg gccagcgaga ccgtgcgctc cagcagcgcg
     1921 gcgcgcgact cggtcaccgc ttcgatcggc acgtcccgtt cgccgaaggg cagctggagg
     1981 atggcggcca ggtcctcgtc gcgctccttg gcccgctgca ggaacgacac cccggacagg
     2041 gccaggccgg cgcccacggc cagggcggcg acgagggcga tcaacggcgt tccccgccga
     2101 ccggcccgcc gctgcgggcg atgagctccg ccaccgaggg gacggaccgg gtcttgggcc
     2161 ggacctcccg ggggcgcacg ggggcctgga acacgctggc gggcaggtcg acgccggagt
     2221 ggacgagggc gtcgaggaac ttcggccgca gcccggcggc ctcgatctcg ccgatctggc
     2281 gcccgtcaga cgacacccgg gggacgaagt ggaagagctg ctggagcagg atgacgtcgc
     2341 cctcgaggcc ctggacctcc tcgacggcca cgacgcggcg cacgccgtcc gacgcccgtt
     2401 cgagctgcac gatgacgttg atggccgagg cgatctgctc ccggatggcc cgcaccggca
     2461 ggtcgaagcc ggccatcagg accatggtct ccagccgggc gagggcgtcg cggggcgtat
     2521 tggcgtggac ggtggtgatc gacccggcgt ggccggtgtt catggcctgg agcatgtcga
     2581 gggcttcgcc gccccggacc tcgccgacca cgatgcggtc gggccgcatc cgcagggcgt
     2641 tgcggacgag gtcccggatg cggacctcgc cccgcccttc gctgttggcc gggcgcgact
     2701 ccagccgcac cacgtggggt tgttggagct ggagttcggc ggcgtcctcg atggtgacga
     2761 tccgctcccg ctcggggatg aacgacgaca gcacgttgag ggtggtcgtc ttgccggtgc
     2821 ccgtcccgcc cgagacgagg acgttgagct tgccccggac gcaggcctcg aggaacaggg
     2881 ccaggtccat ggtcatcgac ccgaagttga tgaggtcggc cacggtgtag gggtcgtcgg
     2941 cgaacttccg gatcgtgagc gtcgggccgt tgagcgacag cggcgggatg atggcgttga
     3001 cccgggaccc gtcggggagg cgggcgtcga ccatggggct cgactcgtcg acgcgccggc
     3061 ccacggcgct cacgatcttg tcgatcacct gccggtactg ggagtcatcg gtgaaggcca
     3121 ggccggtggg ctcgataacg ccccggcgct ccacccagat ctggttgtag gcgttgcaca
     3181 tgatctcggt gacggtcggg tcggccagcg gagcgtcgag gggcccgtag ccgaggatgt
     3241 ccgagaggac ctcggccacg aacttcgacc gctcggacgg cgagatccgc acgtcctccc
     3301 gttgcagcgc ccggtcgagg gccgccttca cttccttctc cagctcgctg ccgacccgct
     3361 tggcgccggt cagcttcggg ccgaggtcgg cgaggacgag gtcccgtacc cgcttcttcg
     3421 tcccctccca gccggcgttg acccgccggg cggcgcgggc cggcttcggc ccctcctcga
     3481 gggtgctgtc gt
//
LOCUS       DATGJT010000327         3695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1181104, whole genome shotgun sequence.
ACCESSION   DATGJT010000327 DATGJT010000000
VERSION     DATGJT010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1181104"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VKX24_05665"
     CDS             <1..485
                     /locus_tag="VKX24_05665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="CUAEP/CCAEP-tail radical SAM protein"
                     /protein_id="HLJ08003.1"
                     /translation="KGHTTAETAAAVGLLRRHGIEIRPSFLPFTPWTTAADVADIVDF
                     VAALDLVGNVDPVQYTVRLLVPEGSLLEPILEREGRLGPYDAERLTWSWKSPDPAVDE
                     LQTRLAALVEGAQTAGEPIGRIYGRVRAAVHAAAGRHAPECASSAEEGRPRLTEPWFC
                     "
     gene            complement(538..1116)
                     /locus_tag="VKX24_05670"
     CDS             complement(538..1116)
                     /locus_tag="VKX24_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008745137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08004.1"
                     /translation="MKFLDTILGRTKPKPANLDALFAVPGAAITLEAAMGVTSAGSAA
                     VCFKPASAYDFAATCTEIGQLLELSGKDTGSEVSQSEDSYGYHWIVIRDPDVSDLVTT
                     VHMVNSTLAERGYGNQLLASVFAFRGESGGVSYLVYLFKRGTFYPFAPEPGGGEKRDN
                     QRELQLQGALQGEVPLEADLSRWFPIWGAPVP"
     gene            complement(1127..2044)
                     /gene="htpX"
                     /locus_tag="VKX24_05675"
     CDS             complement(1127..2044)
                     /gene="htpX"
                     /locus_tag="VKX24_05675"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020573319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HLJ08005.1"
                     /translation="MSTTRGYPKDAGLAARMTFVMFLLGLLYVAVMAALIAAGVNFAF
                     VFILAGGLLFAQYYFSSKIALFSMHAKEVSPAEAPQLHGIVDRLCALADMPKPRVAIA
                     DTDVPNAFATGRNPGDAVVCATTGILRRLEPAELEAVLAHELSHVAHRDVAVMTIAGF
                     LGVAAGFITRSMFWFGGAGIGGGRGRGRDEENEMLLIMLVSVVVYAISFLLTRALSRY
                     RELSADRGAAIITGAPSTLASALVKVTGAMGRIPTRDLRAAEPFNAFFFTPAAAPGFS
                     FSSLFSTHPTLEQRLAQLAELERQMGHPA"
     gene            complement(2082..2360)
                     /locus_tag="VKX24_05680"
     CDS             complement(2082..2360)
                     /locus_tag="VKX24_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010037210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08006.1"
                     /translation="MILRILGHGQLEVAADSLHEINELDEALLHAVEKGDEPGFHTCL
                     ANLVKRVREVGHPVPADHLGPSEYIIPGDDATLEEVRELLSEEGLIPG"
     gene            complement(2357..3106)
                     /locus_tag="VKX24_05685"
     CDS             complement(2357..3106)
                     /locus_tag="VKX24_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006378167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HLJ08007.1"
                     /translation="MGLMKRFSDVMKAKTSKLLDKAEDPRETLDYSYEKQLEMVQKVR
                     RGLADVATSRKRLELQQTQLKASAEKLEGQARQAVAAGKEDLAREALNRRAGIQSQLD
                     GIDAQRTQLQAEEDKLTVALQRLQAKVEAFRTKKETIKATYTAAEAQTKIGEAVSGIS
                     EEMGDVGLAIQRAEDKTATMQARAGAVDELLASGALDDVTAEPGGDIQAQLDALSAGS
                     SVDAELAKMKAELGSGAPPPKEIGAAGEESK"
     gene            complement(3220..>3695)
                     /locus_tag="VKX24_05690"
     CDS             complement(3220..>3695)
                     /locus_tag="VKX24_05690"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLJ08008.1"
                     /translation="SRVADDLYEVARLETHSLRLTLRPTDVAGAVDAALTAVGDPAGV
                     EVEVPEGLEVLADGRRLELIVAGLVENALNHGAPPVVVEAWEEPDGIELVVTDAGPGV
                     PVGAVPTLFTRPGSGIGLYLARGLAEAMGGRVAYEPGPGGRGSTFRVHLRRAPER"
BASE COUNT          528 a         1298 c         1325 g          544 t
ORIGIN      
        1 acaagggcca caccaccgcc gagacggccg ccgccgtcgg cctgctccgc cgtcacggca
       61 tcgagatccg cccgtcgttc ctgccgttca cgccgtggac gacggcggcc gacgtcgccg
      121 acatcgtcga cttcgtggcc gccctcgatc tcgtcggcaa cgtcgacccg gtgcagtaca
      181 ccgttcggct gctcgtgccc gagggttcgc tgctggagcc gatcctggaa cgggagggcc
      241 ggctcgggcc ctacgacgcc gaacggctga cctggtcgtg gaagagcccc gatcccgccg
      301 tcgacgagct gcagacccgc ctcgcggccc tggtggaagg agcccagacc gccggcgagc
      361 ctatcggccg gatctatggc cgcgtccggg ccgcggtgca cgccgcggcc ggccggcatg
      421 ctccggagtg cgcgtcgagc gccgaggaag ggaggccacg gctcaccgag ccgtggttct
      481 gttgaacgga gcccaccgag ggccagttcg gctctctcca gaactgagct ggctgaacta
      541 cggaaccggc gcgccccaga tcgggaacca gcggctgagg tcggcctcca gcggcacctc
      601 gccctggagc gctccctgga gctggagctc ccgctggttg tcgcgcttct cgccgccgcc
      661 gggttcgggg gcgaacgggt agaacgtccc ccgcttgaag aggtagacga ggtagctgac
      721 gccgccgctc tcaccccgga aggcgaagac gctggccagc agctggttgc cgtagccccg
      781 ttcggccagc gtggagttca ccatgtggac ggtggtcacg aggtcgctga cgtcggggtc
      841 gcggatcacg atccagtggt agccgtagga gtcctcgctc tggctgacct cggacccggt
      901 gtcctttcct gacagctcga gcagctggcc gatctcggtg caggtggcgg cgaagtcgta
      961 ggccgacgcc ggcttgaagc acaccgccgc cgatccggcc gaggtgacgc ccatggccgc
     1021 ctcgagcgtg atggccgcgc ccggaacggc gaagagggcg tcgaggttgg ccggcttcgg
     1081 cttggtccgg ccgaggatcg tgtcgaggaa cttcatcgag ccggcctcat gcggggtgac
     1141 ccatctggcg ctcgagttcg gccagctggg ccaaacgctg ctcgagcgtc gggtgggtcg
     1201 agaacagcga ggagaaggag aagcccggcg ccgccgccgg agtgaagaag aaggcgttga
     1261 acggctcggc ggcccgcagg tcccgcgtcg ggatgcggcc catggccccg gtcaccttga
     1321 ccagcgccga agccagcgtc gagggcgcgc cggtgatgat cgccgcgccc cggtcggccg
     1381 acagctcccg gtagcgcgac agggcccgcg tcagcaggaa cgagatggcg tagacgacga
     1441 ccgacaccag catgatgagg agcatctcgt tctcctcgtc gcggccccgg ccccgcccgc
     1501 cgccgatgcc cgcccctccg aaccagaaca tcgaccgggt gatgaacccg gcggccacgc
     1561 cgaggaagcc ggcgatcgtc atgaccgcca cgtcgcggtg ggcgacgtgg gacagctcgt
     1621 gggccagcac cgcctcgagc tcggccggct ccagtcgccg caggatgccg gtggtggcac
     1681 agacgacggc gtcgcccggg ttgcggccgg tggcaaaggc gttggggacg tcggtgtcgg
     1741 cgatggccac ccggggcttg ggcatgtcgg ccagggcgca gagccggtcg acgatgccgt
     1801 ggagctgggg cgcctcggcc gggctcacct ccttggcgtg catggagaag agggcgatct
     1861 tcgacgagaa gtagtactgg gcgaacagca gccccccggc gaggatgaag acgaaggcga
     1921 agttgacccc ggcggcgatc agcgccgcca tcacggccac gtagagaagg cccagcagga
     1981 acatgacgaa cgtcatgcgg gcggccaggc cggcgtcttt gggatagccc cgagtggtgc
     2041 tcatgacgtg atcatcccag gaaccgggag cggccgggca gtcaccccgg gatcagccct
     2101 tcctcggaca gaagctcccg cacttcctcg agggtggcgt cgtcaccggg gatgatgtac
     2161 tccgacgggc cgaggtggtc ggcgggcacg ggatggccga cctcccggac ccgcttgacc
     2221 aggttggcca gacaagtgtg gaagcccggc tcgtcgccct tctccacggc gtggagaagg
     2281 gcttcgtcga gctcgttgat ctcgtgcagg gaatcggccg ccacctcgag ctggccgtgg
     2341 cccaggatgc gcaggatcac ttcgactcct ctccggccgc gccgatctcc ttcggcggcg
     2401 gcgctccgga accgagctcg gccttcatct tggccagctc ggcgtcgacc gacgagccgg
     2461 ccgacagggc gtcgagctgg gcctggatgt cgccgcccgg ctcggcggtg acgtcgtcga
     2521 gggcgccgga cgccagcagc tcgtcgaccg cccccgcccg ggcctgcatg gtggccgtct
     2581 tgtcctccgc ccgctggatg gccaggccga cgtcgcccat ctcctccgag atccccgaca
     2641 ccgcctcgcc gatcttcgtc tgggcctcgg cggcggtgta ggtggccttg atcgtctcct
     2701 tcttcgtgcg gaaggcctcg accttggcct ggagccgctg gagggcgacg gtgagcttgt
     2761 cctcctcggc ctggagctgc gtccgctggg cgtcgatgcc gtcgagctgg ctctggatgc
     2821 ccgcccggcg gttgagggcc tcccgggcca ggtcctcctt gccggcggcc accgcctggc
     2881 gggcctgccc ctcgagcttt tcggccgagg ccttgagctg ggtctgctgg agctcgaggc
     2941 gcttgcggga ggtggcgacg tcggccagcc cccggcgtac cttctggacc atctccagct
     3001 gcttctcgta gctgtagtcg agggtctccc gcggatcctc ggccttgtcc agcagcttcg
     3061 aggtcttggc cttcatcacg tcggagaacc gcttcatgag tcccatggac gcggaaacta
     3121 ctccccgaag gccgggatcg cgcccgggat ttgcttcgag tttcctcagc gcacggcccg
     3181 aaagggcggc gaagccgcca caaaatgctc ccgagcgcgc tagcgctcgg gagcccggcg
     3241 cagatgtacc cggaatgtcg agccccggcc gccgggcccc ggctcgtagg ccacccggcc
     3301 ccccatggcc tcggccagcc cccgggccag gtagaggccg atgcccgacc ccggccgggt
     3361 gaacagcgtg gggacggcgc cgaccggcac gcccggcccg gcgtcggtga cgacgagctc
     3421 gatcccgtcc ggttcttccc aggcctcgac gaccaccggc ggggcgccgt ggttgagggc
     3481 gttctcgacc aggccggcca cgatgagctc cagccgccgg ccgtcggcca gcacctcgag
     3541 cccctccggg acctcgacct cgacgccggc cgggtcgccg acggcggtca gggcggcgtc
     3601 gacggcgccg gcgacgtcgg tcggcctcag cgtgaggcgc aacgagtgcg tctccagccg
     3661 ggccacctcg tagaggtcgt cggccacgcg gctga
//
LOCUS       DATGJT010000328         2285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_562317, whole genome shotgun sequence.
ACCESSION   DATGJT010000328 DATGJT010000000
VERSION     DATGJT010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_562317"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2125
                     /locus_tag="VKX24_05695"
     CDS             <1..2125
                     /locus_tag="VKX24_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08009.1"
                     /translation="VTVGETPVLESRRRYRLGAAVGIVSGAVCFTWMLTGGTWDLLQR
                     NVNANFYDVQARALFHGHWDMPASTLTIEGIREGSRTYMYYGPVPAILRMPVLLLTHR
                     FDGRLTVCSMLLAFLVAMVFVARLGWRIRSLVTSAPVSRKEAVLTAAVLLTAGVGSAF
                     FFLGSDAFVYHEAELWGAALALGAFDFLLKWIVSPTVGALVGTGVFATLDILTRGSVG
                     AGPVVALVLVDLAYGLVAVFGRRGRGDGSAAGGAGPRVLATLGLREIARPGRWAVMVL
                     AMAAVPVLLYVALNEIKFGTLFTLPLNKQVLNPLDPNQRLALADNGGSLFGLKFVPTA
                     LLQFVRPDALRFSKLFPFVAFPPKAQVIGGVQYDILDFCSSLTSAMPALVALGVIGAV
                     GAFGTRRDHRLAAVQLPIVGAVTGTFGVLAIAYIANRYLADFLPVVFLCALSGLYLLR
                     ARSAGWRPRWRRLVAVGLGVLALFGVWVNVGLGLLYQRQLRGSVPVSMRAGFVAFQER
                     LNHDLFDASWPGLTRVGSLGRPGPPGSLAIVGRCTALYQSNGSVWAAVERSTAGGHYR
                     LSVVFPARAGGAPWPILVNGTRGHADYLAVQPVGAGRIRFQYLFQGYHQRWALGSVVS
                     VVPGRRYVIDAVLDPRVPQVTAHLDGATVLLGYLIRATATVHVGVDPFGGPTLAHFPG
                     ALRRLPVTTPICDALEAGLRRAGGS"
BASE COUNT          230 a          874 c          786 g          395 t
ORIGIN      
        1 ggtgaccgtc ggggagactc ccgtgctcga gtcgcgccgc cggtaccgcc tgggggcggc
       61 ggtcgggatc gtgtccggcg cggtgtgctt cacctggatg ctgaccgggg gcacctggga
      121 cctcctccag cgcaacgtca acgcgaactt ctacgacgtc caggcgcggg ccctgttcca
      181 cggccactgg gacatgccgg cctcgaccct caccatcgag gggatccgcg agggcagccg
      241 cacctacatg tactacgggc cggtcccggc gatcctgcgg atgccggtcc tcctgctcac
      301 ccaccgcttc gacggacggc tcacggtgtg ctcgatgctc ctggccttcc tcgtcgcgat
      361 ggtgttcgtc gcccgtctcg gctggcgcat ccgctccctg gtgacgagcg cgcccgtctc
      421 gaggaaggag gccgtcctca cggccgcggt cctgctcacc gccggcgtcg gctccgcgtt
      481 cttcttcctc ggctccgacg ccttcgtcta ccacgaggcc gagctgtggg gagcggccct
      541 ggccctcggg gccttcgact tcttgctcaa gtggatcgtc tcgcccaccg tcggggcgct
      601 cgtcggaacg ggggtgtttg cgaccctcga catcctgacc cgcgggtcgg tcggggccgg
      661 ccccgtcgtc gccctcgtcc tggtcgacct cgcctacggg ctcgtcgccg tgttcggccg
      721 gcggggtcgg ggcgacgggt cggcagccgg cggggccggc cccagggtgc tggcgacgct
      781 cgggctgcgg gagatcgccc gccccggacg gtgggcggtg atggtgctgg cgatggccgc
      841 ggtgccggtg ctcctctacg tcgcgctcaa cgagatcaag ttcgggaccc tgttcaccct
      901 gccgctcaac aagcaggtcc tcaatccgct cgacccgaac cagcgcctgg cgctcgccga
      961 caacgggggc agcctgttcg ggctcaaatt cgtgccgacc gccctcctgc agttcgtgcg
     1021 ccccgacgcc ctgcgcttct ccaagctctt cccgttcgtg gccttccctc cgaaggcgca
     1081 ggtcatcggt ggcgtccagt acgacatctt ggacttctgc tcgagcctca cctcggcgat
     1141 gccggccctc gtcgctctgg gcgtgatcgg cgcagtgggc gccttcggca cccgccggga
     1201 ccatcggctg gcggccgtcc agctgccgat cgtgggggcg gtgacgggca ccttcggggt
     1261 gctggccatc gcctacatcg ccaaccggta cctggccgac ttcctccccg tggtcttcct
     1321 gtgcgccctg tcgggtctgt acctgctccg ggcccggtcg gccggctggc ggccgcggtg
     1381 gcggcggctg gtcgcggtcg gtctcggagt gctggccctg ttcggggtct gggtcaacgt
     1441 cgggctgggc ctcctctacc agcgccagct ccggggttcg gtcccggtct cgatgcgcgc
     1501 cgggttcgtc gccttccagg agcggctgaa ccacgatctg ttcgacgcca gctggccggg
     1561 gctcacccgg gtcggctcgc tcgggcgccc gggcccgccc ggctcactcg ccatcgtcgg
     1621 acggtgcacc gccctctacc agtccaacgg ctcggtgtgg gcggcggtcg agcgctcgac
     1681 ggcgggcggc cactaccgcc tctcggtggt gttcccggcc cgcgccggtg gcgccccgtg
     1741 gcccatcctc gtgaacggca cccgtggcca cgccgactac ctggccgtcc agccggtcgg
     1801 ggccggccgg atccgcttcc agtacctgtt ccagggctac caccagcgct gggcgctggg
     1861 ctccgtggtc tcggtggtgc ccgggcgccg ctacgtgatc gatgcggtgc tcgacccgag
     1921 ggtcccccag gtgaccgccc atctcgacgg ggccaccgtc ctcctcggct acctcatccg
     1981 ggccacggcc acggttcacg tgggtgtcga tcccttcggc ggcccgacgc tcgcgcactt
     2041 ccccggggcc cttcgccggc tgccggtcac cacgcccatc tgcgacgcgc tggaggccgg
     2101 gctccgacgt gccggcggct cgtagggtgc gcccccgccc ccggtgaccc gcccggtcga
     2161 tcggccgtgg cccgcgctcg gcgagccggg accgggcgcc tcccacccct cctcacatcg
     2221 cctcctggtc gtccgttcgc aggagccaga ggttcaccgg ccacgcggtg aggaacccca
     2281 gcacc
//
LOCUS       DATGJT010000329         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_355711, whole genome shotgun sequence.
ACCESSION   DATGJT010000329 DATGJT010000000
VERSION     DATGJT010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355711"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..836)
                     /locus_tag="VKX24_05700"
     CDS             complement(258..836)
                     /locus_tag="VKX24_05700"
                     /inference="COORDINATES: protein motif:HMM:NF022112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GerMN domain-containing protein"
                     /protein_id="HLJ08010.1"
                     /translation="MALVAVVTLTAGCSTPVDSGPKTLRAASIPADLRQETSSTTTTV
                     ISTGESEEVTVYFIGTDRTTGTDRLVAVKRRVTPPASVEKAIQKLFAGPTPQELLQGL
                     RTAIRGDTTVLGVPIEAHIATVNVSGNFALGTPQEQINAFAQVVFTTLDVAGVTGVVF
                     AEHGHRLEVPQGDGSSTSLPLGRASYPQVTPR"
     gene            complement(908..2296)
                     /locus_tag="VKX24_05705"
     CDS             complement(908..2296)
                     /locus_tag="VKX24_05705"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLJ08011.1"
                     /translation="MRIQRPRLGLRARVTLAFAGGALALSAVLSGVSYGLVRNYLVDK
                     TETAALREAFVNASVTQDGLRTASASIPRILTSLQDPDGSPSLVFHDDNWFSSKVGVG
                     KESIPDAFRAAVNSGRPSRQTYHLGGSTELAVGLALPGVQATYFEIFSLDQLDRTLRF
                     LGFALLGAGLATTVAGAAVGRWAATRLMRPVAEVAQAAAAMAGGRLDTRLPDLHDADL
                     ATLTSSFNSMAGALQARIERDARFASDVSHELRSPLTTLATTVGVLASRRDELPERSR
                     AALDLLTADVERFQRLVEDLLEISRYDAGVADLHLEDVRLTELVQRAVASVGGPPVEL
                     GPGAVGDGLAIQVDKRRMTQVIKNLVENAARYGGGATRVIVDAGHYVARVAVDDEGPG
                     VAPGERDAIFERFFRGSAAGQRRGGGQGSGLGLSLVSEHVRLHGGRVWVEDNPVGAGA
                     RFVVEIPLVGPA"
     gene            complement(2316..>2726)
                     /locus_tag="VKX24_05710"
     CDS             complement(2316..>2726)
                     /locus_tag="VKX24_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08012.1"
                     /translation="GLEAGADDYVTKPFVPKELAARIRALLRRARSSEPGTTSMVFGA
                     LDIRPEAGEVLLDGQLVGLTKTEFRLLCELAAHPGRVFSREQLLERVWGYDYFGDGRL
                     VDVHVRRLRTKVEADPAHPRYVVTSRGLGYKLQT"
BASE COUNT          379 a          968 c         1018 g          361 t
ORIGIN      
        1 cgacgacgtg tggtgcgaga gcacaaaggt cggcccgagg ctctggctgc cggccctcac
       61 cgccgccttc cgcagacatc atcgctggtg gacgcgacat ttgaggcgcg cccacgttgc
      121 ggttggatga cgattcggcg cctggcggga caccagaaac cgaatcgaga caatagtccg
      181 gatcggcccc ttttgacacc ccacgaacgc gtagcgtggg ctccgaacgg gctggcgcct
      241 gctcaccgtg gtgtcgttca gcggggtgtc acctgggggt aggacgcccg gccgagcggc
      301 aacgacgtcg aactcccgtc tccctgcggg acctcgagcc ggtgcccgtg ctcggcgaag
      361 acgactcccg tcacgccggc gacgtccagt gtggtgaaga cgacctgggc gaaggcgttg
      421 atctgctcct ggggcgtgcc cagggcgaag ttgcccgaca cgttcacggt ggcgatgtgc
      481 gcctcgatcg gcactccgag gaccgtggtg tcacccctga tggcggtgcg gagcccctgg
      541 agaagttcct ggggcgtcgg gccggcgaac agcttctgga tggccttctc caccgaggcc
      601 ggcggcgtca cccggcgctt cacggccacg aggcggtcgg tcccggtggt gcggtcggtg
      661 ccgatgaagt agacggtgac ctcctccgac tcgccggtcg agatgacggt ggtggtcgtg
      721 gacgacgtct cctggcgcag gtcggccggg atgctggccg cccggagcgt cttcgggccc
      781 gagtcgacgg gcgtcgagca gccggcggtc agcgtgacga cggcgacgag ggccatgagc
      841 ccgaggaacc cccgacggcg ccgcccaccc gccgtgttgc gcctcgggcc gggcctcgta
      901 tcgggcctca tgccggcccc accagcggga tctcgacgac gaaccgggcg ccggcgccga
      961 cggggttgtc ctcgacccac acccgtccgc cgtggaggcg gacgtgctcc gacaccagcg
     1021 acaggccgag gcccgatccc tgcccgccgc cccggcgctg cccggccgcc gatccccgaa
     1081 agaaccgttc gaagatcgca tcccgctccc cgggagccac ccccggcccc tcgtcgtcga
     1141 cggccacccg ggccacgtag tgcccggcgt cgacgatcac ccgggtggcg ccgccgccgt
     1201 agcgggcggc gttctcgacc aggttcttga tgacctgcgt catgcgccgc ttgtcgacct
     1261 ggatggcgag gccgtcgccc accgcccccg ggccgagctc caccggcggc ccccccacgg
     1321 aggccacggc ccgctggacg agctcggtga ggcggacgtc ctccaggtgg aggtcggcca
     1381 cgccggcgtc gtagcgggag atctccagca ggtcctccac cagccgctgg aaccgttcga
     1441 cgtcggccgt gagcaggtcg agcgccgccc gggaccgctc gggcagctcg tcgcgccgcg
     1501 aggccagcac tccgacggtg gtggcgagcg tggtcagcgg ggagcgcagc tcgtgactga
     1561 cgtcggaggc gaagcgggcg tcgcgctcga tccgggcctg gagcgcgccg gccatggagt
     1621 tgaacgacga ggtcagcgtg gccaggtcgg cgtcgtggag gtcgggcagg cgggtgtcga
     1681 gccggccgcc ggccatcgcc gccgccgcct gggccacctc ggccaccggc cgcatgagcc
     1741 gggtggccgc ccaccggccg accgccgccc cggccacggt ggtggccagg ccggcgccga
     1801 gcagggcgaa gccgaggaac cgcagcgtcc ggtcgagctg gtcgaggctg aagatctcga
     1861 agtaggtggc ctgcacgccg ggcagcgcca gccccacggc cagctcggtg ctgccgccca
     1921 ggtggtacgt ctggcgggac gggcgcccgg agttgaccgc cgcccggaag gcgtcgggaa
     1981 tgctctcctt gcccacgccg accttggacg agaaccagtt gtcgtcgtgg aagacgagcg
     2041 acgggctgcc gtccgggtcc tggagggagg tgaggatgcg ggggatgctg gccgaagcgg
     2101 tgcggagacc gtcctgggtc acgctggcat tgacgaacgc ctcccggagg gcggccgtct
     2161 cggtcttgtc gacgaggtag ttgcggacca gcccgtagct gaccccggag aggacggccg
     2221 agagcgccag cgccccaccg gcgaaggcca gggtgaccct ggcccgcagg cccagccgcg
     2281 gccgctggat ccgcacggcc ctccgccctc cgccgctacg tctgcagctt gtagccgagg
     2341 ccccgggagg tcacgacgta gcgaggatgg gccgggtcgg cctcgacctt ggtccgcagc
     2401 cggcggacgt ggacgtcgac gaggcgcccg tccccgaagt agtcgtagcc ccacacccgc
     2461 tcgaggagct gctcgcggga gaacacccgg cccggatggg cggccagctc gcacagcagg
     2521 cggaactcgg tcttggtgag gccgaccagc tggccgtcga gcaggacctc gccggcctcg
     2581 ggccggatgt cgagggcgcc gaagaccatc gaggtcgtgc ccggttcgct gctgcgggcc
     2641 cggcgcagga gggcccggat gcgggcggcc agctccttcg gcacgaacgg cttggtgacg
     2701 tagtcgtccg cccccgcctc gaggcc
//
LOCUS       DATGJT010000330         2450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_769561, whole genome shotgun sequence.
ACCESSION   DATGJT010000330 DATGJT010000000
VERSION     DATGJT010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769561"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            8..280
                     /locus_tag="VKX24_05715"
     CDS             8..280
                     /locus_tag="VKX24_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006237572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HLJ08013.1"
                     /translation="MCLGIPGEVIEFLPDQPDLARVDVSGVRRVINIGLLSDDPPEPG
                     EWVLIHVGFALSKIDEAEAASAMQFLKGIGQAYDDELAALADSRIE"
     gene            291..533
                     /locus_tag="VKX24_05720"
                     /pseudo
     CDS             291..533
                     /locus_tag="VKX24_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013225639.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
     gene            580..1707
                     /gene="hypD"
                     /locus_tag="VKX24_05725"
     CDS             580..1707
                     /gene="hypD"
                     /locus_tag="VKX24_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009945356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HLJ08014.1"
                     /translation="MRFVDEFRDAETARALAARIASLCEPGRNYKFMEVCGGHTHTIY
                     KHGLEDYLPEAVALVHGPGCPVCVIPMGRLDDAIAIAEQPDVIMTTFGDMMRVPGGRG
                     SFFDSKANGADIRMVYSPLDSLKIARKNPDKRVVFMAIGFETTAPSTAMTVLRAAAEG
                     LTNFSIFCNHVTIVPAIKAILDSPDLRLDGFLGPGHVSTVIGCRPYEFIARDYGKPVV
                     VAGFEPLDILQSIYMLMLQLSEGRAEVENQYSRVVPWNGNTVALKAIGQTMELRPYFE
                     WRGLGFISHSALKVRDDYAAFDAERLFSVPGVRVADPKACQCGEVLKGELKPWECKVF
                     GTACTPETPIGTCMVSPEGACAAYYNYGRLTRHRVKEASGT"
     gene            1845..>2450
                     /locus_tag="VKX24_05730"
     CDS             1845..>2450
                     /locus_tag="VKX24_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020642862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HLJ08015.1"
                     /translation="MPGTVREELVLERIDRARRSRPRIKEERITMSHGAGGKATQTLI
                     EAMFLSELRNPLLEPLEDAARLTIGGARLALTTDSFVVSPLFFPGGNIGDLAVNGTVN
                     DLATSGATPLYLSAGFILEEGFEVAELSRIVASMRHAAEAAGVQVVTGDTKVVERGKA
                     DGCYINTAGVGEIEHDLDLGVANARPGDAIIVSGPIGDHGVT"
BASE COUNT          392 a          840 c          862 g          356 t
ORIGIN      
        1 tgatcctatg tgcctcggca tacccggtga ggtgatcgag ttcctcccgg atcagcccga
       61 cctcgcccgg gtggacgtga gcggcgtgcg ccgtgtcatc aacatcggcc tgctgtccga
      121 tgacccgccc gagcccggcg aatgggtgct catccatgtc ggcttcgcgc tgtcgaagat
      181 cgatgaggcc gaggcggcct ccgccatgca gttcctgaag gggatcggcc aggcctacga
      241 cgacgagctc gcggcgctgg ccgactcgag gatcgaatag gggggccgtc atgcgattcg
      301 tcgatgaatt ccgtgacgcc gacaccgcgc acgcgctgtc cgcgaagatc acggcgctgt
      361 gcgagcccgg acgccagtac aagctgatgg aggtgtgcgg cgggcacacg cacaccatct
      421 acaagcacgg gctcgaggac tacctgccgg agcagatcac cctggtgcac ggcccgggct
      481 gcccggtgtg cgtgatcccg atgggccggg tcgacgacgc catggcgctg gccgaatccc
      541 gcatcgattg acgagcagcg cctgaggaag gaggcgggga tgcgtttcgt ggacgagttc
      601 cgggacgccg agacggcccg ggccctggcg gcccggatcg cctcgctgtg cgagccgggc
      661 cggaactaca agttcatgga ggtgtgcgga ggccacaccc acacgatcta caagcacggc
      721 ctcgaggact acctccccga ggcggtggcg ctcgtccacg ggccgggctg ccccgtgtgc
      781 gtgatcccca tgggtcgcct cgacgacgcc atcgccatcg ccgagcaacc cgacgtcatc
      841 atgaccacct tcggcgacat gatgcgggtc ccgggcgggc ggggatcgtt cttcgactcc
      901 aaggcgaacg gcgccgacat ccgcatggtg tactcgccgc tcgactcgct gaagatcgcc
      961 aggaagaacc cggacaagcg ggtcgtgttc atggccatcg gcttcgagac caccgccccg
     1021 tcgacggcca tgaccgtgct gcgggccgcg gccgaggggc tgaccaactt ctcgatcttc
     1081 tgcaaccacg tgacgatcgt cccggccatc aaggccatcc tggactcgcc cgacctgcgc
     1141 ctggacggct tcctcgggcc cgggcacgtc tcgacggtga tcggctgccg gccgtacgag
     1201 ttcatcgcgc gcgactacgg caagccggtg gtcgtggccg ggttcgagcc gctggacatc
     1261 ctgcagtcca tctacatgct gatgctgcag ctgtccgagg gccgggccga ggtcgagaac
     1321 cagtactcgc gggtcgtgcc ctggaacggc aacacggtcg cgctcaaggc catcggccag
     1381 accatggaac tgcggccgta tttcgagtgg cgcggcctcg ggttcatctc gcactccgcg
     1441 ctcaaggtca gggatgacta cgccgccttc gacgccgagc ggctgttctc ggtgccgggc
     1501 gtgcgggtcg ccgaccccaa ggcctgccag tgcggcgagg tcctgaaggg cgagctcaaa
     1561 ccgtgggagt gcaaggtctt cggcaccgcg tgcacgccgg agaccccgat cggcacctgc
     1621 atggtctcgc ccgagggcgc ctgcgccgcc tattacaact acggccggct gacccgccac
     1681 cgggtgaagg aggcgagcgg gacatgaccg ccgaccacgg cgggggcgcc ggcggcaccg
     1741 gctcggccca ggtgggctgg gtggccgagg cgctccgggt ccacgagcga cacgagcagg
     1801 aggagcggga tgagcggcag gaacgccgcg gctccccgca gccgctgccg ggaaccgtgc
     1861 gcgaggaact cgtgctggag cgcatcgacc gggcccgccg cagccgcccc cggatcaagg
     1921 aagagcggat cacgatgtcg cacggggccg ggggcaaggc cacccagacc ctgatcgagg
     1981 cgatgttcct gagcgagctg cgcaacccgc tgctggagcc gctcgaggac gccgcgcggc
     2041 tgaccatcgg gggcgcccgg ctggcgctga ccaccgactc cttcgtggtc tcgccgctgt
     2101 ttttcccggg cggcaacatc ggcgacctgg ccgtcaacgg cacggtcaac gacctggcca
     2161 cctccggcgc caccccgctg tacctgtcgg ccggcttcat cctggaggag gggtttgagg
     2221 tcgccgagct atccaggatc gtggcctcga tgcggcacgc cgctgaggcg gccggcgtcc
     2281 aggtcgtcac cggcgacacc aaggtggtgg agcggggcaa ggccgacggc tgctacatca
     2341 acaccgcggg cgtcggcgag atcgagcacg acctggacct gggcgtggcc aacgcccggc
     2401 ccggggacgc gatcatcgtg tccggcccga tcggcgacca cggcgtcacg
//
LOCUS       DATGJT010000331         2874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_976628, whole genome shotgun sequence.
ACCESSION   DATGJT010000331 DATGJT010000000
VERSION     DATGJT010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976628"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="VKX24_05735"
     CDS             <1..386
                     /locus_tag="VKX24_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020133868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HLJ08016.1"
                     /translation="GARAEGIEANLFFTFFGLDAIHAKRHEHIKLATVGNPGLHLATW
                     AGGLPGVASVMTHYMSTKMDKMDIPSIPEFIEMIADTGAGLYACKASVDLFGLEKNDF
                     IPQVQDIITVGEFYELAAGGQIIFT"
     gene            complement(604..849)
                     /locus_tag="VKX24_05740"
     CDS             complement(604..849)
                     /locus_tag="VKX24_05740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08017.1"
                     /translation="MTVPRTPERWLGETSGVGLCRIDGEGPGDEGAVATGVGLSRTDG
                     AGLGDGEGLAEGAVAATADRVGWIDGETPGDEEGAAT"
     gene            905..1123
                     /locus_tag="VKX24_05745"
     CDS             905..1123
                     /locus_tag="VKX24_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HLJ08018.1"
                     /translation="MAATMAAETAGGQVVASTSSGPDGSYAVTLPPGSYTLVVTSPSA
                     FPRCPATPAVVSAGSVTTVDISCDTGIR"
     gene            complement(1135..2607)
                     /locus_tag="VKX24_05750"
     CDS             complement(1135..2607)
                     /locus_tag="VKX24_05750"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HLJ08019.1"
                     /translation="MAQNLLELVGSPEALAAGDGPLYQRLAAAVTAAVEEGRALPGMV
                     LPPERALAEQMGVSRSTVVAAYDRLRDAGVVERRQGSGTRITARAAQRASNAREEELV
                     EVMHRNVLFRGVIEGTEGRIDFLAAHHGATERFPAVMAAANEELASAALQHGYFPGGY
                     PPLRRAIAEYLTAKGVPTAPGEVLVTNGAQQAISLAMAFLVQRGDAVAIENPSYPGVI
                     DAAAGVGAQMVPIPVGADGARLGALADILATRSPRVVYLNPTFQNPTGCVMPDAARAE
                     VARLVSRHQTVLIDDCAVVDLRTGAEPPPPIASHAPDAPILTVGSMSKLFWGGLRVGW
                     VRAPAPLRARLTGFKAMLDLGSSVPSQVLATHLLADIDAIREERRAEAVAKFRLLDSL
                     MSELLPSWSWSIPGGGLWVWARMPAGSARDLAAEAQRAGVAILPGPTSSCDLSFNNHI
                     RLTIARTPEVLTEGIRRLASAWERYLPRAEGTGDALEVIV"
BASE COUNT          408 a         1053 c         1006 g          407 t
ORIGIN      
        1 acggggcccg ggccgagggc atcgaggcca acctgttctt caccttcttc ggcctcgacg
       61 ccatccacgc caagcgccac gagcacatca agctggcgac ggtgggcaac cccggcctcc
      121 acctcgccac ctgggcgggc ggcctgcccg gggtggcttc cgtgatgacg cactacatgt
      181 ccaccaagat ggacaaaatg gatatccctt ccatccccga gttcatcgag atgatcgccg
      241 acaccggggc cggtctctac gcctgcaagg cgtcggtcga cctgttcggc ctggagaaga
      301 acgacttcat cccccaggtc caggacatca tcacggtggg cgagttctac gagctggcgg
      361 caggaggcca gatcatcttc acctaagggg cggcgggagg ccggaggatc cgggcgccgc
      421 ccgtgggcaa atgccgggcg gggcgaacgg aactccggcc cgcggggctg cgtccaacgc
      481 ggcaggaact cgttctggac cgagggagca gccgttgcgt ctggccaggt tggttggcat
      541 cacctccgtg gccgctgccg tggccgtggc cgctgccggg ctgctctccg gctgcgcgac
      601 ggctcaggta gcggccccct cctcgtcgcc cggcgtctcg ccatcgatcc agccgaccct
      661 gtccgcagtg gcggccaccg ccccttcggc cagcccctcc ccatcgccca ggcccgcacc
      721 gtcggtccgg gaaagcccga cgccggtcgc cacggcccct tcgtcccccg ggccctcgcc
      781 gtcgatacgg cagagcccga cgccgctcgt ttcgcccagc cagcgttcgg gcgtccgggg
      841 caccgtcacg gcgggaccga cctgcccggt cgagcgactt gattcgccct gccctccgag
      901 ccccgtggca gcgacgatgg cggcggagac cgccggcggt caggtcgtgg cgagcacgag
      961 ctccgggccg gacgggagct acgccgtcac cctgccgccc ggcagctaca cgttggtcgt
     1021 caccagccca tcggcgtttc cccgctgccc ggcgacgccg gccgtggtct cagccggctc
     1081 cgtcaccacc gtcgacatca gctgtgacac cgggatccgc tgaccgcacc gggatcagac
     1141 gatgacctcc aaggcgtcgc cggtgccctc ggcccggggg aggtagcgct cccaggccga
     1201 cgccagccgg cggatcccct ccgtcagcac ttcgggtgtc cgggcgatcg tcagccggat
     1261 gtggttgttg aacgacaggt cgcacgagct ggtggggccg ggcaggatcg ccacccccgc
     1321 ccgctgcgcc tcggcggcga ggtccctcgc gctgccggcc ggcatccggg cccacaccca
     1381 cagaccgccg cccgggatcg accaggacca gctcgggagc agctcggaca tcagcgagtc
     1441 cagcagccgg aacttcgcga cggcctccgc ccggcgctcc tcccggatgg cgtcgatgtc
     1501 tgctagcaga tgggtcgcca gcacctggct gggcaccgat gagcccaggt cgagcatcgc
     1561 cttgaagccg gtcagccgcg cccgcagcgg cgccggcgcc cgcacccagc ccacccggag
     1621 gccgccccag aacagcttgc tcatcgatcc cacggtgagg atcggggcgt cgggggcatg
     1681 gctggcaatg ggcggcggcg gctcggcgcc ggtccgcagg tcgaccacgg cgcaatcgtc
     1741 gatcagcacc gtctggtggc gggacaccag ccgggcgacc tcggccctgg ctgcatcggg
     1801 catcacgcag ccggtggggt tctggaaggt cgggttgagg tagacgaccc gcggtgaacg
     1861 ggtggccagg atgtcggcca gcgccccgag ccgtgccccg tcggctccga ccgggatcgg
     1921 caccatctgc gccccgacgc cggcggcggc gtcgatcacg ccggggtagc tggggttctc
     1981 gatggccacc gcgtcgcccc gctggacgag gaacgccatg gccaggctga tcgcctgctg
     2041 ggcgccgttg gtcaccagca cttcgcccgg ggcggtcggc acgcccttgg cggtcagata
     2101 ctcggcgatc gcccggcgca gcggagggta gcctcccggg aagtagccgt gctggagggc
     2161 ggccgaggcc agctcctcgt tggcggccgc catcaccgcc gggaaccgct cggtggcccc
     2221 gtgatgggcg gcgaggaagt cgatccgccc ttcggtaccc tcgatgacgc cccggaacaa
     2281 gacgttgcgg tgcatcactt ccacgagttc ctcttcccgg gcgttcgatg cccgctgggc
     2341 ggccctggcg gtgatccggg tgccgctgcc ctggcggcgc tcgacgacgc ccgcgtcgcg
     2401 gaggcgatcg taggcggcga ccaccgtgct gcggctgacg cccatctgct cggcgagcgc
     2461 ccgctccggc ggcagcacca tcccgggcag cgcccggccc tcttcgacgg cggcggtcac
     2521 cgcggcggcg agccgctggt acaggggccc gtcgccggcc gccagtgcct cgggcgaccc
     2581 gaccaactcc agcaggttct gcgccaaaat tcaatccaat tttctgcgat tggctctaga
     2641 tcgccccaga gggcttccta atactaccag tcatggcaac gaatgggcgg tcccgtggtc
     2701 cccgcagggg caagccaatt ggattgatga ggaaggaaga ggatcggtcg atgtgggtgg
     2761 ttgagcagct cgctcggacg caccgcgaag cgcttcacga ggacgcgcgg gcgtggcggc
     2821 tggcccacga cgccagcgcc aggggtggag agggccgggc ctggtcgctc cggg
//
LOCUS       DATGJT010000332         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1182165, whole genome shotgun sequence.
ACCESSION   DATGJT010000332 DATGJT010000000
VERSION     DATGJT010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1182165"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VKX24_05755"
     CDS             complement(<1..289)
                     /locus_tag="VKX24_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014066648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HLJ08020.1"
                     /translation="MDPLTLEVVRHSLAGVADEMGVTLRRTARSPNITEREDCSCALA
                     TPTGELCAQAEHIPVHLGAMPASIDAALAAFPALADGDGVLLNDPFAGGSHL"
     gene            complement(294..>2344)
                     /locus_tag="VKX24_05760"
     CDS             complement(294..>2344)
                     /locus_tag="VKX24_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013060714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HLJ08021.1"
                     /translation="DVGGTFTDVIVWAPGAGGGLSSWKVPTTPADQSVGFATGLAEAL
                     SRAGAATASLVAHGTTVATNAVLERTGAVTALITTEGFADLLAIGRQNRPSLYDLWAD
                     RPAPLAEGARAVGVPERVGPAGEVVTPLDEAAATGILAGLLEQGIESAAVCLLFSFAN
                     PAHERRLRTLLAGLAPGLRVSLSSEVSPEFREYERASTTALDAYVGPVVERYLRRVAE
                     RAAATGAPVVVMRSGGATMSLEEAVREPVHTLLSGPAAGVRGAVVAAAEEGFGDLVTF
                     DMGGTSTDVCLVEGGSPAVTSESSVGGLPFRTPAVAVHTVGAGGGSLLWLDPAGALRA
                     GPASAGADPGPACYGRGGTAATVTDAHLVAGHLDPARFLGGRLALDAGAAQAVLAPLA
                     GRLGVAVPAVAEAGLRAVEAQMAAAIRVVTVERGRDPRDFALVAFGGAGPMHACALAD
                     ALEMPAVLIPPFAGALSALGLLASPRSVDAWRTRVMALDSDPGAAVALLVELRASAAA
                     ALARQGAEVAAVSYGIDCRYRGQAHEVPVPVGDACPAALESLGERFAAAHRARFGWDA
                     GGDPVELVTFRVRVSGPDPGLQLPPLPPLPPSGLPRRAGGGYLREALGAGAAVDGPCL
                     IWGEDSTTVVAGGWRATVGRVGTLILRRRGPGGPGGPGGERGEPARAARAAGPAGAGG
                     "
BASE COUNT          298 a          947 c          884 g          215 t
ORIGIN      
        1 tgaggtgcga cccgccggcg aacgggtcgt tcagcaggac gccgtcgccg tcggcgaggg
       61 cggggaaggc ggccagggcg gcgtcgatgc tcgccggcat cgccccgagg tgcaccggga
      121 tgtgctcggc ctgcgcacac agctcgccgg tcggggtcgc cagcgcgcag gagcagtcct
      181 cccgctcagt gatgttgggc gaccgggcgg tgcggcgcag ggtgaccccc atctcgtcgg
      241 cgacgccggc caggctgtgg cggacgacct ccagtgtcag cgggtccacc ggctcagccg
      301 cccgccccgg ctggcccggc cgcccgggcc gcccgggccg gttccccgcg ctccccgccc
      361 ggtccgcccg ggccgcctgg gccccgccgg cgcaggatca gggtgccgac ccggccgacg
      421 gtcgcccgcc acccgccggc gacgaccgtc gtcgagtctt cgccccagat caggcagggt
      481 ccgtcgaccg ccgccccggc gcccagcgcc tcccgcaggt agccgccccc ggcccggcgg
      541 ggcagcccgg acggcggcag cggcggcagc ggcggcagct ggaggccagg gtcggggccg
      601 ctgacccgca cccggaaggt caccagctcg accggatcgc caccggcatc ccagccgaag
      661 cgggcgcggt gggcagcggc aaaccgctct cccagcgact cgagcgccgc cgggcaggcg
      721 tcgccgacgg ggaccggcac ctcgtgggcc tgcccgcggt accggcagtc gatgccgtag
      781 gagacggccg ccacctcggc gccctgccgg gccagggcgg cggccgccga cgcccgcagc
      841 tcgaccagca aagcgacggc ggctccgggg tccgagtcca gcgccatgac ccgggtccgc
      901 caggcatcga ccgagcgcgg cgacgccagc agcccgagcg ccgacagcgc cccggcaaac
      961 ggagggatca gcacggcggg catctcgagg gcgtcggcga gggcgcaggc gtgcatcggg
     1021 ccggcgccgc cgaaggcgac cagggcgaag tcgcgggggt cccggccgcg ctcgacggtc
     1081 accacccgga tcgccgccgc catctgcgcc tccaccgccc gcagcccggc ctccgccacc
     1141 gccggcacgg ccacgccaag gcgcccggcc agcggcgcca ggaccgcctg cgccgccccg
     1201 gcgtccagcg ccagccgccc gcccaggaac cgggcgggat cgaggtgccc ggcgacgagg
     1261 tgggcatcgg tgaccgtcgc cgcggtgccg ccccgcccgt agcaggccgg gcccggatcc
     1321 gctccggcgc tcgccggccc ggcgcggagc gctccggcgg gatcgagcca gaggaggctg
     1381 ccgccgccgg cccccacggt gtggacggcg acggccggcg tgcggaacgg gaggccgccg
     1441 accgacgact cgctcgtgac cgccggcgac ccgccctcga ccaggcagac gtcggtcgac
     1501 gtgccgccca tgtcgaaggt caccaggtcg ccgaagccct cctcggcggc ggcaaccacc
     1561 gcgccccgga ccccggcggc ggggccggac agcaatgtgt ggaccggttc ccggacggcc
     1621 tcctccaagc tcatcgtggc gccgccggag cgcatcacca ccaccggggc gccggtggcc
     1681 gccgcccgct cggcgacccg gcggaggtac cgctccacca ccgggcccac gtaggcgtcg
     1741 agggccgtcg tcgaggcccg ctcgtactcg cggaactccg gcgagacctc cgacgacagc
     1801 gacacccgga ggcccggcgc caacccggcg agcagcgtgc ggagccggcg ctcgtgggcg
     1861 gggttggcga aggagaagag caggcacacc gccgccgact cgatcccctg ctccaggagg
     1921 cccgccagga tcccggtcgc cgccgcctcg tcgagcgggg tgaccacctc gcccgctggc
     1981 ccgacccgct cggggacccc gaccgcccgg gccccctcgg ccagcggtgc cggccggtcg
     2041 gcccacaggt cgtagagcga cgggcggttc tggcggccga tcgccagcag gtcggcgaag
     2101 ccttcggtgg tgatcagcgc ggtcacggct ccggtgcgct cgagcacggc gttggtggcg
     2161 accgtcgttc catgggcgac cagcgaggcg gtcgctgcgc cggcccggga cagcgcctcg
     2221 gcgagcccgg tggcgaagcc gacgctctgg tcggccgggg tggtcgggac cttccacgac
     2281 gacagcccgc cacccgcgcc cggcgcccac acgatcacat cggtgaacgt gcccccgaca
     2341 tcga
//
LOCUS       DATGJT010000333         2249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_458419, whole genome shotgun sequence.
ACCESSION   DATGJT010000333 DATGJT010000000
VERSION     DATGJT010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458419"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..326
                     /locus_tag="VKX24_05765"
     CDS             27..326
                     /locus_tag="VKX24_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08022.1"
                     /translation="MRKRIVASALLSALLLVGTPTAALADGHHGHGYRQGYRHGYHRG
                     YEHGYHRGYRDGRDHGYWRGRDWDHRGADWYYWNWDEQCEWAWYHDPGWYNAYCS"
     gene            381..983
                     /locus_tag="VKX24_05770"
     CDS             381..983
                     /locus_tag="VKX24_05770"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ08023.1"
                     /translation="MTRDRDVAAFDERARRYDEGWLGRLHHEIAERTAGLAATTGEPP
                     AAILDVGCGTGDLLRLLARRWPGTEQLVGVDPAPSMIEIAAAAADDGRLRFSSGVAER
                     LPFPDGAFELVVSTTSFDHWADQQAGLRESARVLAPGGRLVLVDQFSAWLLPTLVAGR
                     RDKARTRRRAERLLAAAGFDAPAWHPLYGGIIKAVAATRP"
     gene            complement(991..1446)
                     /locus_tag="VKX24_05775"
     CDS             complement(991..1446)
                     /locus_tag="VKX24_05775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08024.1"
                     /translation="MSSDELTVVRRIFVTALLLSVVHYVDNTIRFDDYTGGKPGFVTR
                     AMIPISWVLFTAAGVAGYRRLTRGARSLGGSLLGAYSVSGLIGILHYTTVPPGDFDWF
                     QNTFIALDFLAGLAVLVVAVRAVTGRPLRPARPAARSGPAAPSAASGQR"
     gene            complement(1446..2048)
                     /locus_tag="VKX24_05780"
     CDS             complement(1446..2048)
                     /locus_tag="VKX24_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005265596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLJ08025.1"
                     /translation="MNTRDRLVATAAQLYGRYGYTGVGLKQVASEAGVPIGSLYHFFP
                     GGKEELAAEALRLSGHGYRLLVEGVFESAPDLVSGIRTCFDSAAEVLAATGYADACWI
                     ETVALEVASTNEPLRLVSAEIFDGWIDAATRLVESGGVADAGSARRLGIAIITGLEGA
                     FVLSRALRSPEPLHAAGESLVAAAEAALQARPRVGKGGQR"
BASE COUNT          327 a          819 c          810 g          293 t
ORIGIN      
        1 ctcacaggca ggggaaagga tcacgcatgc gcaagcgaat cgtggcgtcc gcattgctca
       61 gtgcgctgct gctcgtcggc acgcccaccg ccgccctggc cgacggccat cacggccatg
      121 gataccggca gggctatcgg cacgggtacc accgcggcta cgagcacggc taccaccggg
      181 gctaccgcga cggacgggat cacggctact ggcggggccg ggactgggac caccgcggcg
      241 ccgactggta ctactggaac tgggacgagc agtgcgagtg ggcgtggtac cacgatccgg
      301 gctggtacaa cgcctactgc agctaggacg acgggccggc ccgccaccag ggccggcccg
      361 tctgctgcga gactcagcga gtgacccggg accgcgacgt tgccgcattc gacgaacggg
      421 cccgtcgcta cgacgaggga tggctcggtc gcctgcacca cgagatcgcc gagcgcacgg
      481 cggggctggc ggcgaccact ggcgagccgc ccgcggccat cctcgacgtc ggatgcggga
      541 ccggcgatct gctccggctc ctggcccggc ggtggccggg gacggagcag ctcgtcggtg
      601 tcgaccccgc accgtcgatg atcgagatcg ccgccgcagc ggccgatgac ggccgcctcc
      661 gcttctcgtc cggcgtcgcg gagcgcctcc ccttcccgga cggcgccttc gagctggtcg
      721 tgagcacgac gtcgttcgac cattgggcgg accagcaggc cggtctgcgg gaaagcgccc
      781 gggtgctggc gccgggcggc cgtctggtgc tcgtggacca gttctcggcc tggctgctcc
      841 cgacgctggt cgccggccgg cgggacaagg cccggacccg ccggcgggcc gaacggctcc
      901 tggccgcggc cggcttcgat gccccggcct ggcaccccct ctacggcggg atcatcaagg
      961 ccgtcgccgc cacgcgcccc tagagcgtcc ttaccgctgg ccagaggcgg ccgaaggcgc
     1021 agccggcccg gacctcgccg cggggcgggc gggccggagc ggccggccgg tgacggcgcg
     1081 caccgccacg acgaggaccg ccagcccggc caggaagtcg agggcgatga aggtgttctg
     1141 gaaccagtcg aagtcgcccg gcggcacggt ggtgtagtgg agaatcccga tgaggccgct
     1201 caccgagtag gcgcccagca gcgaaccgcc gagcgagcgg gccccccggg tgagccggcg
     1261 gtatccggcg acgccggcgg cggtgaacag cacccagctg atcgggatca tggcccgagt
     1321 gacgaatccc ggcttgccgc cggtgtagtc gtcgaagcgg atcgtgttgt cgacgtagtg
     1381 gaccaccgac agcagcagcg ccgtcacgaa gatgcgccgg acgaccgtca gctcgtcgga
     1441 gctcatcacc gctgacctcc ctttccgacc cggggccggg cctgcagcgc cgcttcggcg
     1501 gcggcgacca acgattcgcc ggcggcgtgc agcggctcgg gactccgcag cgcccggctc
     1561 agcacgaaag ccccctccag cccggtgatg atggcgatcc ccagccggcg ggcggacccg
     1621 gcgtcggcga cgccgcccga ctccaccagc cgggtggcgg cgtcgatcca gccgtcgaag
     1681 atctcggcgc tcaccagccg gagcggctcg ttggtgctcg ccacctccag agccacggtc
     1741 tcgatccagc aggcgtcggc gtagccggtg gcggccagca cctcggcggc gctgtcgaaa
     1801 caggtcctga tgcccgacac gaggtcgggg gccgactcga acaccccctc caccagcagc
     1861 cggtacccgt ggccggagag gcggagggcc tccgcggcca gctcctcctt cccgccgggg
     1921 aagaagtggt agagcgaccc gatcggcacg ccggcctcgg acgccacctg cttgagcccg
     1981 accccggtgt agccgtaccg cccgtagagc tgggcggcgg tggccacgag ccggtccctg
     2041 gtgttcacga cgccgcagaa tagtcgtcta gtagaacgtt cgtctagttc gccgtgcgtg
     2101 cgggcgacgc agggtgggaa tctttggacc gtgaacgccc accgcggcct tcgccgtgtc
     2161 gcccggcccc tccggcgcat cggcgtgctc ctcgtcatca ccctgctggt cgagtacgtc
     2221 gtcttcccgc aggtggccgg cgcccgcaa
//
LOCUS       DATGJT010000334         2124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1182225, whole genome shotgun sequence.
ACCESSION   DATGJT010000334 DATGJT010000000
VERSION     DATGJT010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1182225"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1985)
                     /locus_tag="VKX24_05785"
     CDS             complement(<1..1985)
                     /locus_tag="VKX24_05785"
                     /inference="COORDINATES: protein motif:HMM:NF025011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-associated domain-containing protein"
                     /protein_id="HLJ08026.1"
                     /translation="MASSLTSHLQALSAEDLAALLERRTDSRRLLGQRRQDFGALAQI
                     LSEPHSIRWAVSSLNDFLAQLLELAVWLGPEVPAAVLAEQVPDASPEQLRAAAGELAR
                     WGLAFVNGGGPGGWALHLPGSTMAAVEPPIGFGPSARRLLDLKSTEFLTAVARNIGLA
                     SRPRSGKAALIDEITAVISGKAAVQRLLEGAPPKAADLFERIRQRGGTLGRHDLMLTG
                     IIRWSDPPWSERRQVFTPLDWLEAHGVAVFDGAAPYAGSVTIPGEVELALRGGALFAR
                     WPSPTPPALSSGAVDPAGRGDVGDPSKIVAEMEVLLESWAETRPPTLQKGGLGVRELR
                     KTAKALHFTEHYVSFLYALAAEAQLIAVNLNDRVVPTAKRAEWTASPAPARWAVLFEA
                     WLNAVLWTEERADPLLAPNDAAPRLWASKARRGILEELSRLAPGEATSVHQLAAVMSW
                     RYPQLLGSIDNASVIVERALAGLELLGTISGPPAIRLLEPGRSAIADAAWFDHVGPAT
                     AAFPTEVATCTVGADLRVIVPGPPVPELATALGRFADLKASSPARIYELTEASLRRGL
                     DGGMTAEEMTALLSDHATRGVPQNVAYLIEDVGRRYGHLIAGQAGLYLRADDPALLRS
                     AVSDRRLASFRPRLIAPTVAVLEGTSTEALLAQLRLAG"
BASE COUNT          300 a          775 c          803 g          246 t
ORIGIN      
        1 ccggcgagcc ggagctgggc caggagcgcc tcggtcgagg tgccctccag cacggccacc
       61 gtcggggcga tcagccgggg acggaacgac gccaggcggc ggtcggagac ggcggagcgc
      121 agcagggccg ggtcgtccgc ccgcaggtac aggccggcct ggccggcgat caggtggccg
      181 tagcggcggc cgacgtcctc gatcaggtag gccacattct ggggcacccc ccgggtggcg
      241 tggtcggaca ggagcgccgt catctcctcg gcggtcatcc ccccgtcgag gccccggcgc
      301 agcgacgctt cggtcagctc gtagatccgg gcgggggacg acgccttgag gtcggcgaac
      361 cgccccagcg cggtcgccag ctccggcacc ggcgggccgg ggacgatcac ccgcaggtcg
      421 gcaccgacgg tgcaggtcgc cacctcggtg gggaaggcgg cggtcgccgg accaacgtgg
      481 tcgaaccagg ccgcatcggc gatggccgac cgccccggct ccagcagccg gatggcgggt
      541 ggcccggaga tcgtgcccag cagctcgagc ccggccagcg cccgctcgac gatcacggaa
      601 gcgttgtcga tcgacccgag cagctgcggg tagcgccagc tcatcaccgc cgccagctgg
      661 tgcacgctgg tcgcctcgcc cggcgccagc cgggagagct cctcaaggat cccgcggcgc
      721 gccttggagg cccacagccg cggcgccgcg tcgttgggcg ccagcagcgg atcggcccgt
      781 tcctcggtcc agaggaccgc gttcagccag gcctcgaaca gcaccgccca ccgggcggga
      841 gccgggctcg ccgtccactc ggcgcgcttg gcggtcggga ccacccggtc gttcaggttg
      901 acggcgatca gctgcgcctc ggccgccagc gcgtagagga aggacacgta gtgctccgtg
      961 aagtgcagcg ccttggcggt cttgcggagc tcccggaccc ccagcccgcc cttctgcagc
     1021 gtcgggggcc gggtctcggc ccagctctcg agcagcacct ccatctccgc cacgatcttg
     1081 gaggggtccc cgacatcgcc gcgcccggcc gggtcgacgg cgccggagga gagcgccggg
     1141 ggggtcggcg acggccagcg cgcgaacagc gccccgccgc gcagcgcgag ctcgacctcg
     1201 cccgggatgg tgacgctccc ggcgtagggg gccgccccgt cgaagacggc gacgccgtgg
     1261 gcctccagcc agtcgagcgg cgtgaacacc tggcgccgtt ccgaccaggg cgggtccgac
     1321 cagcggatga tcccggtgag catcaggtcg tggcggccga gcgtgccgcc gcgctggcgg
     1381 atccgctcga acaggtcggc cgccttgggc ggtgctccct cgaggaggcg ctgcacggct
     1441 gccttgccgg agatcaccgc ggtgatctca tcgatcagcg ccgccttgcc cgaccgcggc
     1501 cgggaggcca acccgatgtt gcgggccacc gcggtgagga actcggtcga cttgaggtcc
     1561 agcaaccggc gggccgacgg cccaaaaccg atcggcggtt cgaccgccgc catcgtcgag
     1621 ccggggaggt gcagtgccca gccccccggg cccccgccgt tgacgaaggc gagcccccac
     1681 cgggccagct cgccggcggc cgcccggagc tgctcggggc tggcgtccgg gacctgttcg
     1741 gcgaggaccg cggccggtac ttccgggccg agccagaccg ccagctccag cagctgggcc
     1801 aggaagtcgt tcagcgacga caccgcccac cggatgctgt gcggttccga gaggatctgg
     1861 gcgagggcgc cgaagtcctg gcgccgctgg ccgagcagcc ggcggctgtc ggtgcgacgc
     1921 tcgagcagcg cagcgagatc ctcggcgctc agggcctgca ggtgggaggt cagcgaagaa
     1981 gccatgggat cgaggttatc caacgccggg cagaactagc aggaacatca cgcaagggcg
     2041 ggaagaaata tcggtcggga gccgccgctg ccggccgggg accccctccg gcgcccccgg
     2101 gggactcccg ccggagccgg cgct
//
LOCUS       DATGJT010000335         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_770182, whole genome shotgun sequence.
ACCESSION   DATGJT010000335 DATGJT010000000
VERSION     DATGJT010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770182"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VKX24_05790"
     CDS             <1..1035
                     /locus_tag="VKX24_05790"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08027.1"
                     /translation="ERARKAGAGLQFILNLSTPVYTGLAYLAIVGALAVVAASSTTNL
                     TALGAAMLVMLRSLSYGQAVQGGYTSLASAIPAIEELQHRLGVFEAGKRADGGEPVER
                     VGAITMDRVSFAYQPGQPVLRDISFTITPHEVVGVVGPSGAGKSTLVQLLLGLREPDE
                     GRVMAAGREISSLDRAKWARKVTFVPQAAHLITGTIAENIAFLRDGVSQSDVERAARL
                     AHFHDDVAGFPEGYDRQVGKHGGHLSGGQQQRLCIARALVERPDVLILDEPTSALDVR
                     SEHLIRETLQTLREHMTVIIIAHRLSTLTICDRIMVIADGELKAFDTPLRLESSSDFY
                     REALSLSGMR"
     gene            complement(999..2285)
                     /locus_tag="VKX24_05795"
     CDS             complement(999..2285)
                     /locus_tag="VKX24_05795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08028.1"
                     /translation="MAAILVALGVGMNHMTYRVWGGFWVAPVLLILSIPIANRAARHD
                     GQAMGRLVMVAAAVKVVIAPLLRYWMAYSLYGGFSDSADYHQAGVVLAPLFRHGIYQN
                     LGQISGTRFLEILTGQVYAFIGPTLFGGFMVFSWFSFIGCYLFYRAFRIAYPEGDGRR
                     YALLVFFFPTMLFWPSSIGKEAFMILALGAAAVGAAQLFVGRFRGLVWLALGLWGAAV
                     VRPHMALIVGAGLLVGAPLAVLRGGGQGGLRQRGRLAGVILILGLLIAGPILIHAAEG
                     FFHLQSLNAETAQGVLNQTTQLSTKNGSTFASPSPNNPFGFVAAVATVLFRPFPFEVR
                     NAQSLLASLEGLSLLGLCVLAFRRLARLPAEGSRRPYLIFALVYTLAFIYAFSALGNF
                     GILARERSQLLPVLFVLLCIPRPGAQRMPDSDNASR"
     gene            complement(2414..>2607)
                     /locus_tag="VKX24_05800"
     CDS             complement(2414..>2607)
                     /locus_tag="VKX24_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08029.1"
                     /translation="ELLERLDIPVVGTVLVGSEAVSNASKYYTARYYAETEHGGFRRR
                     RSSGGNGERPAPETPAARR"
BASE COUNT          475 a          864 c          920 g          348 t
ORIGIN      
        1 gagcgagctc ggaaggcagg cgccggcctg cagttcatcc tgaatctctc cacgcccgtg
       61 tataccggcc tcgcgtacct ggcgatcgtc ggtgcgctcg cagtcgtcgc ggcgtcgagt
      121 accacgaatc tgacggctct cggcgccgcc atgctcgtga tgctccggtc gctcagctac
      181 ggacaagctg tccagggcgg gtataccagc ctggcgagcg ccatcccggc catcgaggag
      241 ctccagcatc gactcggggt cttcgaggcg ggcaaaaggg ccgacggcgg agagccggtc
      301 gagcgggtcg gggcgatcac catggatcgc gtgtccttcg cctaccagcc gggccaaccc
      361 gtcctgcggg acatctcgtt cacgatcacg ccgcacgagg tcgtcggcgt cgttgggccg
      421 tccggagcgg ggaaatcgac gctcgtccaa ttgctcctcg ggctgcggga gcccgacgag
      481 gggcgggtca tggccgccgg ccgcgagatc tcctcgctgg accgggccaa gtgggctcgc
      541 aaggtgacgt tcgtcccgca ggcggcccac ctaatcaccg gcacgatcgc cgagaacatc
      601 gccttcctcc gggacggcgt gtcacagtcc gacgtggagc gggcagcccg gctcgcccat
      661 ttccacgacg acgtcgccgg cttcccggag ggctacgacc gccaggtggg gaagcacggc
      721 ggtcacctga gcggcgggca gcagcagcgg ctgtgcatcg cccgggcgct ggtcgaacgg
      781 cccgacgtcc tcatcctcga cgagccgact agcgccctcg acgtccgcag cgagcacctg
      841 atccgggaaa cactccagac cctgcgggag cacatgacgg tgatcatcat cgcccaccgc
      901 ctgtcgacgc tcaccatctg cgaccggatc atggtcatcg ccgacggcga gctgaaggcg
      961 ttcgacacgc cgctccgcct ggaaagctcc agcgacttct accgcgaggc gttgtcgctg
     1021 tcgggcatgc gctgagcgcc gggccgggga atacagagca gcacgaacag gaccggcagc
     1081 agctgggacc gctcccgggc caggatgccg aaattcccga gagccgagaa agcgtaaatg
     1141 aaggccagcg tgtagaccaa cgcgaagatc agatagggcc gccgcgaccc ttcggccggg
     1201 aggcgggcca gccggcggaa agcgaggacg cagaggccga gaagtgacag cccttcgagg
     1261 cttgccagca gtgactgggc gttgcggacc tcgaaaggga acggtcggaa cagcacggtt
     1321 gcgactgccg cgacgaagcc gaagggattg ttgggggagg ggctcgcaaa cgtggacccg
     1381 ttcttcgtgg acagttgcgt cgtctgattg agcacgccct gcgctgtctc ggcgttaagg
     1441 gactggaggt ggaagaagcc ttcggcggcg tggatcagta tcggtccggc gatcagcaga
     1501 ccgaggatga ggatcacgcc agccagccgg ccccgctggc gtagacctcc ctggcccccg
     1561 ccccggagga cggcgagcgg agcgccgacc agcagaccgg caccgacgat cagcgccata
     1621 tgggggcgga cgacggcggc gccccacagg cccagggcca gccaaaccag gccccggaag
     1681 cgcccgacga agagctgggc ggcgccgacg gcggcggcgc cgagggccag gatcatgaac
     1741 gcttccttgc cgatgctcga cggccagaag agcatcgtcg ggaagaagaa cacgagcagc
     1801 gcgtagcggc ggccgtcgcc ctcggggtag gcgatccgga aggcccggta gaacagatag
     1861 cagccgatga acgagaacca cgagaacacc atgaagccgc cgaacaacgt ggggccgatg
     1921 aaggcgtata cctggccggt gaggatctcg aggaagcgcg taccagagat ctgcccgagg
     1981 ttctggtaga tgccgtgacg aaacagcgga gccaggacga cccccgcctg gtgatagtcg
     2041 gccgagtcgc tgaacccgcc gtacagactg taggccatcc agtaccggag cagcggtgcg
     2101 atgaccacct tcaccgcggc ggcgaccatg accagacggc ccatcgcctg gccgtcgtgc
     2161 cgggcggcac ggttggcgat cgggattgac aggatgagca ggacgggcgc cacccagaat
     2221 ccgccccaga cgcggtaggt catgtggttc atcccgacgc ccaaggcgac gagaatcgcc
     2281 gccatggcta ccaccgcgag gcgcggcgcg tggttcggga tcaactggag gtcgtggtag
     2341 cgccgtgcag gccttccggt gcgacgggac tccgggacag cgcgggcacg ccccgccgcc
     2401 cgcgccggag cggtcatcgt cgggcggccg gcgtctccgg ggcgggtcgc tccccgttgc
     2461 cgcccgagga acgccggcgc cggaacccgc cgtgctcggt ttcggcgtag taccgcgccg
     2521 tgtagtactt cgaagcgttt gacaccgcct cgctccccac caggacggta ccgacgacgg
     2581 ggatgtcgag ccgctcgagc agctcgg
//
LOCUS       DATGJT010000336         2486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_976962, whole genome shotgun sequence.
ACCESSION   DATGJT010000336 DATGJT010000000
VERSION     DATGJT010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976962"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..816)
                     /locus_tag="VKX24_05805"
     CDS             complement(<1..816)
                     /locus_tag="VKX24_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HLJ08030.1"
                     /translation="MTTADETQSETSGPPPVDRVEQAERFLALHQGPEPLLIPNAWDA
                     GSAKLLISLGFQALATTSSGFAASLGRLDGHTMDDESLANAAVIVKAAGPVPVSADLE
                     NGFSDEPSQVRITLLNALGVGLSGCSIEDYTGRADDPLYDLKFAAERIEAAATIAHRG
                     PVRMVLTARAEDFIRGRPDLADTIARLQAYQEVGADVLYAPGLTALDDIRSVVTSVDR
                     PVNVLALPNGPTVAELAEAGVRRISVGGAFAFAAYGAMIEAARELRDQGTYGYW"
     gene            complement(827..2347)
                     /locus_tag="VKX24_05810"
     CDS             complement(827..2347)
                     /locus_tag="VKX24_05810"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HLJ08031.1"
                     /translation="MARSHLHRRFPLVLGLALVVVFLPVVARGRAGVRARAAGRPNIL
                     FILMDDMRSDGVMNNPAVLPKTKHWLADAGTTFTQAFTTTSLCCPDRATIWSGRFEHN
                     HGVVDNYSGDNLDRDWIEPRYLHDAGYTTALVGKFITDWNFRYVPPHFDEYAAFQGGY
                     TNSRFMVKDLGEANRHTETAPYTTDWIGQKAASYIDGFARGGKPWFMQVAPHAPHQEQ
                     TAPGPDSCNLHKMYTWPARYDSVPMPKWNPTPAVTVEAGPNGRAEKADKVPYVRGMNF
                     TEKCGEITYEGHMRTLMAADDMVDQLMTHLQNTGQLANTMVIFTTDNGYAWDERGLTS
                     KGMPWTEHIQAPLMVRWDGVFAAGSTDDRLVGTEDYLPTYLDAAGYTPPVLRYPLDGL
                     SFLPGRPARNEKLLEFGPILRTSPKGYQGHRGIPTWLSLRTKNWQYIEFFEKVNNTTV
                     QWKEYYDLTRDPWELDNLLYDKNSKSLTMPPDVAAIAVRLHRAATCAGRSGANPCP"
BASE COUNT          342 a          810 c          928 g          406 t
ORIGIN      
        1 ccagtagccg taggtgccct ggtcgcgcag ctcccgggcg gcctcgatca tggcgccgta
       61 ggcggcgaag gcgaaggcgc cgcccaccga gatccgccgg acgccggcct cggccagctc
      121 cgccaccgtc ggcccgttgg gcagggccag cacgttgacg ggccggtcga ccgacgtcac
      181 cacggagcgg atgtcgtcga gcgccgtgag gcccggggcg tagaggacgt cggcgccgac
      241 ctcctggtag gcctggagcc gggcgatcgt gtcggccagg tcgggccggc cccggatgaa
      301 gtcttcggcc cgggcggtca gcaccatgcg gacgggcccg cggtgggcga tcgtggccgc
      361 cgcctcgatc cgctcggcgg cgaacttgag gtcgtagagc gggtcgtcgg cccggccggt
      421 gtagtcctcg atggaacagc ccgagagccc caccccgagg gcgttcagca gcgtgatccg
      481 cacctgcgac ggctcgtcgg agaagccgtt ctccaggtcg gccgacaccg gcaccgggcc
      541 ggcggccttc acgatcaccg cggcgttggc cagcgattcg tcgtccatgg tgtggccgtc
      601 gaggcgcccg agcgaggcgg cgaacccgct gctggtggtg gccagggcct ggaagcccag
      661 cgagatcagg agcttggccg agccggcgtc ccaggcgttg gggatcagca gcggctcggg
      721 gccctggtgc agggcgagga agcgctcggc ctgctcgacc cggtcgacgg gcggcggccc
      781 cgacgtctcc gactgtgtct cgtctgcggt ggtcatgccc ggaacattac gggcacgggt
      841 tggccccgga cctcccggcg caggtcgccg cccggtggag gcgcacggcg atcgccgcca
      901 cgtcgggcgg catggtcagg ctcttcgaat tcttgtcgta gagcaggttg tcgagctccc
      961 aggggtccct ggtcaggtcg tagtactcct tccactgcac cgtggtgttg ttgaccttct
     1021 cgaagaactc gatgtactgc cagttcttcg tccgcagcga cagccaggtc gggatgccgc
     1081 ggtggccctg gtagcccttc ggcgacgtcc gcaggatggg gccgaactcc agcagcttct
     1141 cgttccgggc cggccggccg ggcaggaacg acagcccgtc cagcggatag cgcagcaccg
     1201 gcggcgtgta cccggcggcg tcgaggtagg tcggcaggta gtcctcggtg ccgacgaggc
     1261 ggtcgtcggt ggaacccgcc gcgaagaccc cgtcccaccg gaccatgagc ggcgcctgga
     1321 tgtgctccgt ccagggcatc cccttgctgg tgaggccccg ctcgtcccag gcgtagccgt
     1381 tgtcggtggt gaagatcacc atggtgttgg ccagctgccc ggtgttctgg aggtgggtca
     1441 tcagctggtc gaccatgtcg tcggcggcca tcagcgtccg catgtggccc tcgtaggtga
     1501 tctcgccgca cttctcggtg aagttcatcc cccgcacgta gggcaccttg tcggctttct
     1561 cggcccggcc gttgggcccg gcctccaccg tcaccgccgg cgtcgggttc cacttcggca
     1621 tgggcaccga gtcgtagcgg gcgggccagg tgtacatctt gtgcaggttg caggaatcag
     1681 gcccgggagc ggtctgctcc tggtgcgggg cgtggggtgc cacctgcatg aaccacggct
     1741 tgccgccccg ggcgaagccg tcgatgtagg acgccgcctt ctggccgatc cagtccgtgg
     1801 tgtagggggc cgtctcggtg tggcggttgg cctcgccgag gtccttcacc atgaaccggg
     1861 agttggtgta gccgccctgg aaggcggcgt actcgtcgaa gtggggcggc acgtagcgga
     1921 agttccagtc ggtgatgaac ttcccgacca gcgccgtggt gtagccggcg tcgtggaggt
     1981 agcggggctc gatccagtcc cggtcgaggt tgtcgccgga gtagttgtcg acgacgccgt
     2041 ggttgtgctc gaagcggccg ctccagatcg tggcccggtc cgggcagcac agcgacgtgg
     2101 tggtgaaggc ctgggtgaac gtcgtgccgg cgtcggccag ccagtgcttc gtcttgggca
     2161 ggacggcggg gttgttcatc acgccgtcgg agcgcatgtc gtccatgagg atgaacagga
     2221 tgttgggccg cccggcggcc cgggcccgga cgccggcccg gccccgggcc accaccggca
     2281 ggaagacgac gaccagggcg agaccgagga ccagcgggaa gcgccggtgg aggtgcgaac
     2341 gggccacggt gcacacagta gtacgccgac cacattggca tattgcgtca caaagcccac
     2401 ttccgtctca gttgcgtaac ggatccggtc ctggagccct caggcggacg ggcgcgccac
     2461 cgatgggtcg ggtcatggac gggatc
//
LOCUS       DATGJT010000337         6573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_667410, whole genome shotgun sequence.
ACCESSION   DATGJT010000337 DATGJT010000000
VERSION     DATGJT010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6573
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_667410"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VKX24_05815"
     CDS             complement(<1..190)
                     /locus_tag="VKX24_05815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08032.1"
                     /translation="MSRRHRWATVATGLALLTAYGAGTLLLNAQAATSTQTQTDKAGD
                     ANTQFDANGNPTATVANEP"
     gene            complement(335..1222)
                     /locus_tag="VKX24_05820"
     CDS             complement(335..1222)
                     /locus_tag="VKX24_05820"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HLJ08033.1"
                     /translation="MEIRHLDALLAITEAGSFSAAAEVLHTVQSNVSEQIRQLERELG
                     VPVLVRGRRGATPTEFGRVVLDRARRIRGELEAMRVDLSLLQGLEAGHASLGVVGTAS
                     RWLVPALVGDLQQRAPGVMLRINEGASERLAAEVVSHELTMAVVTEPILDPRLTVEHL
                     LEEDLVGLVPEGLELPPEPIPFPTMAGLSLILPPSGNPFRLEIDEVAAAHGLGLTVPV
                     EVEGVRLIADLVAAGRGASILPQTAVPPGLAGLRTVTIAGMPPRRLALVTARHAYLSL
                     ADRAVRDSVRRLVSIHART"
     gene            1420..1788
                     /locus_tag="VKX24_05825"
     CDS             1420..1788
                     /locus_tag="VKX24_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HLJ08034.1"
                     /translation="MTMLATAPVSGGTAAWMADAVCYGHTAVFFAPPGERPEAREVRE
                     AKARSICHACPVMTPCRKWARDNREYGFWGGESEEERAAAGFRVEMPVGRIARYPRGE
                     GKPVQARPDRAARQRLAATG"
     gene            1916..2263
                     /locus_tag="VKX24_05830"
     CDS             1916..2263
                     /locus_tag="VKX24_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HLJ08035.1"
                     /translation="MSPSLASEVVIDVRDVRTDVGWQSIASCSGQTDLFFAPPGERPE
                     ARARRESKARQLCLACPVLAHCRDWARENREYGFWGGESEEERAMAGYRVDMPVGRVA
                     RYPRGKRSRLFGR"
     gene            2307..3029
                     /locus_tag="VKX24_05835"
     CDS             2307..3029
                     /locus_tag="VKX24_05835"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ08036.1"
                     /translation="MEPHRRGSWLLGLLIAASVLLPASGARAAGSATVREVQVSFSPA
                     QIPVSVGDTVTWVYVSSPPGSGHSVTFQDEDLTPACPALVLDDCQRNASQKVSRTFTA
                     PGTYPYHCKIHQSQGMTGVVVVAAATTTATTRATTTSTVKPSSTSTTARATSSSTTTT
                     RPLATSSTVVRSSTTTSDTSSVLLPGAPPSLSGDAGSAAGGGSGGSGGSDRGAVALIV
                     GLLLAVSAGGGYLLWRLRPGRP"
     gene            complement(3154..3630)
                     /locus_tag="VKX24_05840"
     CDS             complement(3154..3630)
                     /locus_tag="VKX24_05840"
                     /inference="COORDINATES: protein motif:HMM:NF025215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation family protein"
                     /protein_id="HLJ08037.1"
                     /translation="MGRRGFGLAAIAVIGGLAVAGCRGTTVEKAGASSVFHLQPGECF
                     RSPSGATTAGRTVQVDDVSPVPCADAHDGEVFAVVAHPAPSGAAYPGDDALADFSAAE
                     CLQRFPAYTGAAYDGSDLDVASVRPDRRSWADKHDREVACVLYKKDSTLTGSRRQA"
     gene            3689..5560
                     /locus_tag="VKX24_05845"
     CDS             3689..5560
                     /locus_tag="VKX24_05845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08038.1"
                     /translation="MPGSPEERRKGSAWARSYLPLLALPLAVVIAVAVLPSALNLPQA
                     NPTETLEYAPVPPSDKDTPPPPAPGNLASLALASSPGVASGPSDTGAATGGGTRSPEP
                     APRAQAAPPPPPSAAALPPPVKTPSTKRCVGKPPRQTEDPLAPPCVASFTGDNFGGTY
                     QGVTKDEIAVLFYFDGFINDIGTSRGTERRPLGQYFDLLNPPKENEHVFIRVLRGWQR
                     YFNDRFQTYDRFVHFYAFYATSSTPESRRADAADNYAKLKPFATISYARENADDYLDS
                     MAKRGVLNFASYVGRPASLFAGYPKLIWGYLPSIEVQARQFSSYVCSKVLPYPVSFSG
                     NAGENGRPRVLGLLSSADPDHPELKLLAELAKSEIEACGGKFAREKTFPRAGVAQDAS
                     TTGQYATDNMIQFKQAGITTIIWPGGLETKQSQAAALAGYRPEIVLAGDRLIESRDNS
                     GFQDKSVWDHAVVVSNVTKKGLDDQELCFLAHREVDPDSPKSDVVNYACEFYNDLFQL
                     FTGIQVAGPRLGPTSIDKGYHAIPHIASSDPTVPACFYEPGDYTCVKDAVVMWWDSSG
                     RAPGSQEAGCWRMPEGGKRYLTATWPAGDVLAQRTPKDPCNNYGAGYLIDPRPPSLR"
     gene            5557..6546
                     /locus_tag="VKX24_05850"
     CDS             5557..6546
                     /locus_tag="VKX24_05850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08039.1"
                     /translation="MRGRLAGAALTAALLGVVALLPARPVSALDRPGDAIRVGENQTV
                     EKNFGPMTAADPLPDLPSPAPQLNTPAACRQAAYCDVIPLEIVLPPGLRPADEFFVSV
                     QHDWKTSTLPGTDYTRPTEVNDMDLYVWTDPAGDEPVQQSSTGTMPEKLRLFRPTKGK
                     YSIVVFNYRGPNTGYRLTVADKPEQIVPPFESLAPDFNPPALAVEAPAVEEPAEQPEA
                     PPARPAAPPVPVVSDAPAPVPPKADVAPPALTPVPVEPDPDFSNFSDEAFDRQLAAPS
                     ADVLQAKRAKAVGPPPPASAGSLVLWLAGVPLLLVAAGGLWLWRKGSAVLDVG"
BASE COUNT          912 a         2430 c         2328 g          903 t
ORIGIN      
        1 ggggttcgtt ggccaccgtc gccgtcgggt tgccgttggc gtcgaactgc gtgttggcgt
       61 cgccggcctt gtcggtctgc gtctgggtgc tggtcgccgc ctgggcattc agcagcagcg
      121 tcccggcgcc gtaggcggtg agtagcgcca ggcctgtggc caccgtggcc caacggtgtc
      181 gcctgctcac gtcgaaacct ccaggatgcg cgttcggggg gcagattcag ccccccttgc
      241 ttcgacgccc gccgcccgtt ccccctcctg cgcccgccgg aagtggcggg agggcccgga
      301 cgaacgttcc caaaagcccg cgaagctcag gcggtcaggt ccgggcgtgg atgctgacga
      361 gccggcggac ggagtcccgc accgcccggt cagccagcga caggtaggcg tggcgggcgg
      421 tcaccagggc gaggcggcgg ggcggcatgc cggcgatcgt caccgtccgc agcccggcca
      481 gtccgggggg gacggcggtc tggggcagga tcgatgcccc ccgaccggcg gccaccaggt
      541 cggcgatgag gcggacgccc tcgacctcca ccgggaccgt caggccgagc ccgtgggcgg
      601 cggcaacctc gtcgatctcc agccggaagg ggttcccgct cggcggcagg atgagcgaca
      661 ggccggccat ggtcgggaac gggatcggtt cgggcggcag ctcgaggcct tcggggacga
      721 ggcccacgag atcttcctcg aggaggtgct cgacggtcag gcgggggtcg aggatcggct
      781 cggtcacgac ggccatcgtg agctcgtggc tcacgacctc ggccgccaga cgctccgacg
      841 cgccctcgtt gatccgcagc atgacgcccg gcgcccgctg ctgcagatcg ccgacgaggg
      901 ccgggacgag ccagcggctg gcggtgccga cgacgccgag gctggcgtgc ccggcctcga
      961 ggccctggag cagcgacagg tcgacccgca tggcctcgag ctcgccgcgg atccggcggg
     1021 cccggtcgag gacgacccgg ccgaactccg tcggggtggc gccccgccgg ccccggacga
     1081 ggacgggcac gccgagctcc cgttccagct gcctgatctg ctccgacacg ttggactgga
     1141 cggtgtgcag gacctcggcc gccgccgaaa acgacccggc ctcggtgatg gccagcaggg
     1201 cgtcgaggtg acggatctcc aacggtttcg tccctttccc ggagtggtat cgcaacagga
     1261 gattacacac atccaggata agctcttttt tcgattgctt aggcgtgatt ggattcgggc
     1321 agagaaggac gggtcggggg accggacccc cccacctccc ccgaccctcc tcttctcttc
     1381 tgtttcagaa ccagcgggac gactttgcag gagacgatca tgaccatgtt ggcgaccgca
     1441 ccggtgtcgg gcggtacggc ggcctggatg gcggacgcgg tctgctacgg gcacactgcc
     1501 gtcttcttcg ctccgcccgg tgagcggccg gaggcccgcg aggtccgcga ggcgaaggcc
     1561 cgctcgatct gccatgcctg cccggtcatg acgccgtgcc ggaagtgggc ccgcgacaac
     1621 cgggagtacg gcttctgggg cggtgagtcc gaagaggaac gggccgccgc cggcttccgg
     1681 gtcgagatgc cggtgggtcg gatcgcccgg tatccccggg gcgagggcaa gccggtccag
     1741 gcccgtcccg accgggccgc ccgccagcgc ctggccgcta ccggctaggg ttcgctcctc
     1801 cgacatatcg tccgtgccga tcggtccgat cgggcgggcg cattgcgttg atttctgacg
     1861 tcgtgggaaa attgttgacg tctgggatcc gcagtctctt cgaaaggccc ttcccgtgtc
     1921 gccgtcgctc gcttcggaag tcgtcatcga tgtccgcgat gtccgtaccg atgtcggctg
     1981 gcagtcgatc gcgtcgtgca gcggccagac cgacctgttc ttcgcgccgc ccggtgagcg
     2041 gcccgaggcc cgggcccgcc gggagtccaa ggcccgccag ctctgtctgg cctgccccgt
     2101 cctggcgcac tgtcgggact gggcccggga gaaccgggag tacggcttct ggggcggcga
     2161 gtcggaggag gagcgggcca tggccggcta ccgggtcgac atgccggtgg gccgggtcgc
     2221 ccgctacccg aggggcaagc ggtcccggct cttcggccgc tgattgacgt cccgcccggc
     2281 cggggctcgg ggataattcg ccgcgcatgg aaccacaccg ccgcggctcc tggcttctcg
     2341 gcctgctgat cgcggcgagc gtcctcctgc cggcctccgg cgcccgcgcc gccggcagcg
     2401 cgaccgtccg cgaggtccag gtcagcttca gcccggcgca gatcccggtc tccgtggggg
     2461 acaccgtgac gtgggtctac gtcagcagcc ccccgggctc cggccactcc gtgacgttcc
     2521 aggacgagga cctcaccccg gcctgtccag ccctcgtcct cgacgactgc cagcggaacg
     2581 cctcgcagaa ggtgtcgcgg accttcaccg cgccggggac gtacccgtac cactgcaaga
     2641 tccatcagtc ccagggcatg accggggtgg tcgtggtggc ggcagccacc acgacggcca
     2701 cgacccgggc caccacgaca tcgacggtga agccctccag cacctccacc acggcccggg
     2761 cgacgagcag cagcacgacg acgacccggc cgctggccac gagctcgacc gtcgtgcggt
     2821 cgtccaccac cacctcggac acctcgagcg ttctcctccc gggtgccccg ccgtcgctgt
     2881 ccggcgacgc gggctccgcc gccggcggcg ggtcgggcgg ctccggcggg agcgaccggg
     2941 gcgcggtggc gctgatcgtc gggctcctgc tggccgtgtc ggccggcggc gggtacctcc
     3001 tctggcggct ccgccccggc cgaccctgac cgcccgggga ccggcgaagc aggaaacggg
     3061 cgcccgtccc ccgaataccc cgagactacg gcgaggggtc gagcaggacc tccgggcggc
     3121 cgctccccct cgccctgaag tgccgggcgg tgtctaggcc tggcggcggg agccggtgag
     3181 cgtcgagtcc ttcttgtaca ggacgcaggc gacctcccgg tcgtgcttgt cggcccacga
     3241 ccgccggtcg gggcggacgc tggccacgtc gaggtcggag ccgtcgtagg cggcgccggt
     3301 gtaggccggg aagcgctgga ggcactccgc ggcggagaag tcggccaggg catcgtcgcc
     3361 ggggtaggcg gcgccggacg gcgccgggtg ggcgacgacg gcgaagacct cgccgtcgtg
     3421 ggcgtcggcg cagggcacgg gcgagacgtc gtccacctgg accgtccgcc cggcggtggt
     3481 ggcgcccgac gggctgcgga agcactcgcc gggctggagg tggaagaccg acgaggcgcc
     3541 ggccttctcc acggtcgtgc cgcggcaccc ggcgacggcc aggccgccga tcacggcaat
     3601 tgctgccagc ccgaaccccc ggcgccccac ggccggccac attagctccc gcggcatctg
     3661 tccgattggg gctcgctagg gtggtgcggt gcctggcagc cctgaagaac ggcggaaggg
     3721 ctcggcctgg gcccgaagct acctcccgct gctcgctctc ccgctggcgg tggtcatcgc
     3781 ggtggcggtg ctcccgtcgg cgctcaacct gccccaggcg aaccccaccg agacgctgga
     3841 gtacgccccg gtcccgccgt ccgacaagga cacgccgccc ccgccggcgc ccggcaacct
     3901 ggcctcgctg gcgctggcgt cgagtcccgg cgtggcgtcg ggcccgtccg acaccggcgc
     3961 ggccaccggc ggcggcaccc ggagcccgga accggcgccg agggcgcagg ccgcgcctcc
     4021 gccgccgccc tcggcggccg ccctgccccc gcccgtgaag acgccctcga ccaagcgctg
     4081 cgtcggcaag ccgccccgcc agaccgagga ccccctcgcc ccgccctgcg tggccagctt
     4141 caccggcgac aatttcggcg gcacctacca gggcgtgacg aaggacgaga tcgccgtcct
     4201 gttctacttc gacgggttca tcaacgacat cggcacctcc cggggcaccg agcgccggcc
     4261 gctgggccag tacttcgacc tgctcaaccc gccgaaggag aacgagcacg tcttcatccg
     4321 ggtcctgcgg ggctggcagc ggtacttcaa cgaccggttc cagacctacg accggttcgt
     4381 gcacttctac gccttctacg ccacgtcctc gacgccggag tcccgccggg ccgacgccgc
     4441 cgacaactac gccaagctca agcccttcgc caccatcagc tacgcccggg agaacgccga
     4501 cgactacctc gacagcatgg ccaagcgggg cgtcctcaac ttcgcctcct acgtcggccg
     4561 cccggcgtcg ctgttcgccg gctatcccaa gctgatctgg ggctacctgc cgtcgatcga
     4621 ggtccaggcc cgtcagttct ccagctacgt ctgctccaag gtgctgccgt acccggtgag
     4681 cttctccggc aacgccggcg aaaacggccg gccccgggtg ctcgggctgc tgtcgagcgc
     4741 cgatccggac catccggagc tcaagctgct ggccgagctg gccaagagcg agatcgaggc
     4801 ctgcggcggg aagttcgccc gggagaagac cttcccccgg gccggcgtcg cccaggacgc
     4861 ctcgaccacc ggccagtacg ccaccgacaa catgatccag ttcaagcagg ccgggatcac
     4921 cacgatcatc tggcccgggg ggctggagac caagcagtcg caggcggcgg cgctggccgg
     4981 ctaccggccg gagatcgtgc tggccggcga ccggctgatt gagagccgcg acaactccgg
     5041 cttccaggac aagagcgtgt gggaccacgc cgtggtcgtg tccaacgtca cgaagaaggg
     5101 gctcgacgac caggagctgt gcttcctggc ccaccgggag gtcgatcccg acagccccaa
     5161 gagcgacgtc gtcaactacg cctgcgagtt ctacaacgac ctgttccagc tcttcaccgg
     5221 catccaggtg gccggccccc gcctggggcc gacgtcgatc gacaagggct accacgccat
     5281 tccccacatt gcctcgtccg acccgacggt gccggcctgc ttctacgagc ccggcgacta
     5341 cacctgcgtg aaagacgcag tcgtcatgtg gtgggactcc agcgggcggg ctccgggcag
     5401 ccaggaggcc ggctgctggc ggatgcccga aggcgggaag cgctacctga cggcgacctg
     5461 gccggccggc gacgtcctcg cccagcgcac gccgaaggat ccctgcaaca actacggcgc
     5521 cgggtacctc atcgaccccc gtccgccgag tctgcgatga ggggccgcct ggccggggcg
     5581 gccctgacgg ccgcgctgct cggagtggtg gcgctcctgc cggcgcggcc ggtctcggcg
     5641 ctcgaccggc cgggcgacgc catccgggtc ggcgagaacc agacggtgga gaagaacttc
     5701 gggccgatga ccgccgccga cccgctgccc gacctcccaa gcccggcgcc gcagctcaac
     5761 acgccggcgg cctgccgcca ggcggcgtac tgcgacgtca tcccgctgga gatcgtcctg
     5821 ccgccggggc tgcggccggc cgacgagttc ttcgtttccg tgcagcacga ctggaagacg
     5881 agcacgctcc ccggcaccga ctacacgagg ccgaccgagg tcaacgacat ggacctctac
     5941 gtgtggaccg acccggccgg ggacgagccc gtccagcagt cgtcgacggg caccatgccc
     6001 gagaagctcc ggctcttccg gccgacaaag ggcaagtact cgatcgtcgt cttcaactac
     6061 cgcggcccga acaccggcta ccggctgacc gtggccgaca agccggagca gatcgtcccg
     6121 ccgttcgagt cgctggcgcc cgacttcaac ccgccggccc tggccgtcga ggcgccggcc
     6181 gtcgaggagc cggccgagca gcccgaggcg ccgccggccc ggccggccgc cccgccggtg
     6241 ccggtcgtga gcgacgcccc ggcgccggtg ccgccgaagg cggacgtcgc accgccggcc
     6301 ctgacgccgg tgccggtcga gcccgacccc gacttctcga atttctccga cgaggcgttc
     6361 gaccggcagc tcgccgcccc gagcgccgac gtcctccagg ccaagcgggc gaaggccgtc
     6421 ggtccgccgc cgccggcgtc ggccgggagc ctcgtcctgt ggctggccgg cgtcccgctg
     6481 ctgctggtgg cggccggcgg cctgtggctg tggcggaagg gctccgccgt cctcgacgtg
     6541 ggctgatccc ggggcggcgg cgtttcagcg ctg
//
LOCUS       DATGJT010000338         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1495049, whole genome shotgun sequence.
ACCESSION   DATGJT010000338 DATGJT010000000
VERSION     DATGJT010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495049"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..1163
                     /gene="rlmN"
                     /locus_tag="VKX24_05855"
     CDS             81..1163
                     /gene="rlmN"
                     /locus_tag="VKX24_05855"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012615600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HLJ08040.1"
                     /translation="MAEQSSPALSRYGAGFDQIAALLAEWGEPAYRARQVWDGLYRRR
                     APLEGLTDVGRPLRARLAEALPPALHAVHSSSADAGETRKWLWSAGGDGASVETVLMR
                     YPGRATVCVSTQAGCAMGCTFCATGQAGFERHLSAGEIVEQVARAQHASPARVGNVVF
                     MGMGEPLANYDATWGAVERLHDGFGLSARHITVSTVGVVPGMRRLATERLPVTLAVSL
                     HAPDDKLRDELVPLNRRYPLAEVLAAARAYLAASGRRLSFEYAMIGGVNDAPAQADAL
                     ARRLRGFSPAAHVNLIPLNPTPGFGAPASPPRRVAAFAERLRAGGVNATVRRNRGTKI
                     DAACGQLRTRLGGPAPSGLGAPVTMG"
     gene            1184..1528
                     /locus_tag="VKX24_05860"
     CDS             1184..1528
                     /locus_tag="VKX24_05860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08041.1"
                     /translation="MAGQQRFFDPSQPQTLQIAVILLYLEAFFSLVGSFGVALPFVLA
                     YGGGAYGIANGKKWGYILALVVALLALAVRFVGQSMTSALNDPIGLMFAIALVALLAH
                     PQSREYQKIWFS"
     gene            1641..>2196
                     /locus_tag="VKX24_05865"
     CDS             1641..>2196
                     /locus_tag="VKX24_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08042.1"
                     /translation="MLPGVIALATLLAVIGGLMVFVQSETPRAAGAATPAALDRPVRA
                     LAAPPPAAPALPPSPAPALPHGKGMWLHYLRQAAGNDPAVLVAQAKAAGLTHVYLRLG
                     SSKDGFYAQGDLDRLLPPAHAAGLAVVGWDFPYLFDAEADAERAAAEIAYTTPTGQRI
                     DAFSADIETRSEGVNISVPAADTYS"
BASE COUNT          261 a          875 c          755 g          305 t
ORIGIN      
        1 cgccgtgggc ctctaccgcc acctcggttt cgaggtccac cacatcgacc gggcctacgt
       61 cgccgagctg cactgacccg atggccgagc agtcatctcc ggctctttcc cgctacggcg
      121 ccggtttcga ccagatcgcc gcactgctgg cggaatgggg cgaaccggcc taccgggccc
      181 ggcaggtgtg ggacgggctc taccgccggc gggcgcccct ggaaggcctg accgacgtcg
      241 gccgcccgct ccgggcccgc ctggccgagg cgctcccacc ggcattgcac gccgtccaca
      301 gcagttcggc ggacgccggc gagacgcgga agtggctctg gagcgccggc ggcgacggtg
      361 cctcggtgga gaccgtgctc atgcgctacc ccggccgggc cacggtgtgc gtctcgacgc
      421 aggccggctg cgccatgggc tgcacgttct gcgccaccgg ccaggccggc ttcgagcgcc
      481 acctgagcgc cggcgagatc gtcgagcagg tggcccgggc gcagcacgcc agcccggccc
      541 gggtcggcaa cgtcgtcttc atggggatgg gcgagccgct ggccaactac gacgccacct
      601 ggggcgcggt ggagcgcctc cacgacggtt tcggcctctc ggcccggcac atcaccgtct
      661 cgacggtcgg cgtcgtgccc ggcatgcgcc gcctggccac cgagcggctg ccggtcacgc
      721 tggcggtgtc gctccacgcc cccgacgaca agctgcgcga cgagctcgtg cccctcaacc
      781 ggcgctaccc gctggccgag gtgctggccg ccgcccgggc ctacctggcc gcctcggggc
      841 ggcggctcag cttcgagtac gccatgatcg gcggcgtcaa cgacgccccg gcccaggccg
      901 acgccctggc ccgccggctg cggggcttct cgccggcggc ccacgtcaac ctgatccccc
      961 tcaacccgac gccggggttc ggggccccgg ccagcccgcc ccggcgggtg gccgccttcg
     1021 ccgagcggct gcgggccggc ggcgtcaacg ccaccgtccg ccgcaaccgg ggcaccaaga
     1081 tcgacgccgc ctgcgggcaa ctgcgcaccc gcctgggcgg tccggcgccc tcggggctgg
     1141 gtgctcctgt cacaatgggg taacgacgag gaggatccag accgtggccg gacagcagcg
     1201 cttcttcgac ccctcccagc cccagacgct gcagatcgcc gtcatcctgc tctacctcga
     1261 ggccttcttc tcgctggtgg ggtctttcgg cgtcgccctg cccttcgtcc tcgcctatgg
     1321 cgggggggcg tacggcatcg ccaacgggaa gaagtggggc tacatcctgg ccctcgtcgt
     1381 ggcgctcctg gcgctggcgg tcaggttcgt cggccagtcg atgacgtcgg ccctcaacga
     1441 ccccatcggc ctgatgttcg ccatcgccct ggtcgcgctg ctggcccacc cgcagagccg
     1501 ggagtaccag aagatctggt tctcgtagcg ccgggccgcc cggcggcgcc gcccgctcca
     1561 atcctccggc aggggcgtcg ccaccgctaa attacatcct tgtgatttcg gtgcgggacg
     1621 ggcgtccggc cgatcccggc atgctgccgg gggtcatcgc cctggcgacg ctgctggcgg
     1681 tgatcggcgg gctcatggtc ttcgtccagt cggagacgcc gcgggcggcg ggggccgcca
     1741 ccccggcggc gctggaccgg cccgtccggg cgctggccgc cccgcctccc gccgccccgg
     1801 cgctgccgcc cagccccgcg cccgccctgc cccacggcaa gggcatgtgg ctccactatc
     1861 tccgccaggc ggccggcaac gaccccgccg tcctcgtcgc ccaggcgaag gccgccggcc
     1921 tcacccacgt ctatctccgg ctcggctcgt cgaaggacgg gttctacgcc cagggcgacc
     1981 tcgaccgcct cctcccgccg gcccacgccg ccgggctggc cgtggtcggc tgggacttcc
     2041 cctacctctt cgacgccgag gccgacgcgg agcgggccgc ggccgagatc gcctacacca
     2101 ccccgaccgg gcagcgcatc gacgccttct cggccgacat cgagacccgg agcgagggcg
     2161 tgaacatctc ggtgccggcg gccgacacct acagcc
//
LOCUS       DATGJT010000339         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_356703, whole genome shotgun sequence.
ACCESSION   DATGJT010000339 DATGJT010000000
VERSION     DATGJT010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356703"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VKX24_05870"
     CDS             <1..405
                     /locus_tag="VKX24_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08043.1"
                     /translation="VDHPARTLAFQDSVPAGAGGVSHAIDVPRGSRRLKVVLTAAADA
                     PCEIVVTDAAGRKVAVSSDMRGRSEASRVLDIDVRPPAGAASWAWGLWHISIVQTTPV
                     HEPQPVDFSGMFVNALPGGAATIVAALFASHE"
     gene            complement(444..1280)
                     /locus_tag="VKX24_05875"
     CDS             complement(444..1280)
                     /locus_tag="VKX24_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08044.1"
                     /translation="MGSGTCPGVRPGGRVVTTIGDCTLNFLFRAPDGTRYIGTAGHCV
                     NLGTEHTFKDSDSSGNGHIEKIWARGTGPVAKDPTGQRIGEFVYAVVHDPKDFALIRL
                     DPGVKASPEMCYFGAPRGLFTSDTDDALVLRYYGNGTAVGAAKVGVEPSVGRPPGIDD
                     GGVAPARSAVAMGTPDPDHVYAAGVALPGDSGAGVMTADGQALGVLVTAGVHGIRFAG
                     GPDSIPAPSHLPRADDKGVDVGTMGITRLGPQLARASEELGVPLELVVETRGRPARRS
                     GV"
     gene            1745..>2086
                     /locus_tag="VKX24_05880"
     CDS             1745..>2086
                     /locus_tag="VKX24_05880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08045.1"
                     /translation="MLRTRVFLVTLGLFSSGPMTVPAVGQAADPGALGFTASATGTAL
                     YVGALPPDLGHVPVRAGFSGAAVSAAGQIGTIFDELGSQVATGGGGHHAEARARGLDV
                     NGVVVAGAAEAG"
BASE COUNT          282 a          762 c          736 g          306 t
ORIGIN      
        1 gtcgaccatc ccgcccgcac gctcgccttc caggattccg ttcccgccgg ggccggcggc
       61 gtgagccacg ccatcgacgt cccccggggc agccgccggc tcaaggtcgt cctcaccgcc
      121 gccgccgacg caccgtgtga gatcgtcgtg accgacgccg ccggccgcaa ggtcgccgtc
      181 tcgtcggaca tgaggggacg ctcagaggcc agccgggtcc tcgacatcga cgtccgcccg
      241 ccggccggcg ccgccagttg ggcctggggc ctctggcaca tctccatcgt gcagacgacg
      301 ccggtgcatg agccgcagcc ggttgacttc tccgggatgt tcgtcaacgc cttgcccggc
      361 ggggcggcga ccatcgtcgc cgccctcttc gccagtcacg aataggcggc gagccgccca
      421 cacggccatc tcgacggttg cggtcagacc cctgaacgcc tggcgggccg gcccctggtc
      481 tccaccacca actccagcgg tacgcccaac tcctccgacg cccgtgcgag ctgcggccca
      541 aggcgggtga ttcccatggt tccgacgtcg acgcccttgt cgtccgcccg ggggagatgg
      601 ctcggagccg gtatcgagtc ggggccgcct gcgaatcgga tgccgtggac gccggcggtc
      661 acgagaacac cgagcgcctg gccgtcggcg gtcatcacgc cggcgccgga atcgccgggg
      721 agtgccactc cggcggcata gacgtgatcg gggtcgggcg ttcccatggc cacggccgac
      781 cgggcggggg ccacgccgcc gtcgtcgatg ccgggcgggc ggccgacgct cggctcgaca
      841 ccgactttgg ccgctcccac cgcggtcccg ttcccgtagt accggaggac gagggcgtcg
      901 tcggtgtcgg acgtgaacag gccgcggggt gctccgaagt agcacatctc cgggctggct
      961 ttgacgccgg gatcgaggcg gatcagggcg aagtccttcg ggtcgtgcac gacggcgtag
     1021 acgaactccc cgatcctctg accggtggga tccttggcca ccgggccggt tcccctggcc
     1081 cagatcttct cgatgtggcc attgccggag ctatccgagt ccttgaacgt gtgctccgtg
     1141 cccaggttga cgcagtgacc ggcggtgccg atgtagcggg tgccgtcggg ggcccggaac
     1201 aggaagttca gcgtgcagtc gccgatcgtg gtgacgaccc ggccaccggg ccggacgccc
     1261 gggcacgtcc cggaacccac gggcgcccga tcgtcggcgg cggggaccgg aatctccgag
     1321 cacggcacgc cgacgggcgc caacggggcc tcaccggccc ccggggcccg cgcctcggga
     1381 cggttcggcg ccggtccatt cgccagggcc ggaaccggga gcagggcggc cagaggcgct
     1441 agtccggcca tcagcaccat tcgccgcatc ggatgcctcc actggtcggg tcccgccttc
     1501 gggccgcggg cgagaggcgc ggtcgaacct ctccccggtg gccggttccc ggtttgtccg
     1561 ctccggaaac cccgagccgg attccgccgg tgtcgtccta cggcacgtcg gaaacctaca
     1621 acctcgaccg cgtcgggata ataaagcgga tcgaactgcc agcgaattcc tggcgtcgta
     1681 ggctccgtcg gcgagatctc gacgaatgac ggtgcggcca acgcccgtgg gagaggacag
     1741 attcatgctc cggacccggg tcttcctcgt aacgctcggg ctcttcagtt ccggcccgat
     1801 gaccgtcccc gccgttggcc aggccgccga tccgggagcc ttgggcttca cggcgtccgc
     1861 caccgggacc gccctgtatg tcggggcgct gccgcccgac ctcgggcacg ttccagtgcg
     1921 ggcgggattt tccggcgccg cggtcagcgc cgccggtcag atcggcacca tcttcgacga
     1981 gctcggctcc caggtcgcca ccgggggcgg cgggcaccac gccgaggcac gggcccgggg
     2041 cctcgatgtc aacggcgtgg tggtggcggg cgccgccgaa gccggt
//
LOCUS       DATGJT010000340         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_668036, whole genome shotgun sequence.
ACCESSION   DATGJT010000340 DATGJT010000000
VERSION     DATGJT010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_668036"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2286)
                     /locus_tag="VKX24_05885"
     CDS             complement(<1..>2286)
                     /locus_tag="VKX24_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018657011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08046.1"
                     /translation="AVAAGDLSRKITVDVKGEILSLKNTINTMVDQLSSFADEVTRVA
                     REVGTEGKLGGQAQVKGVSGTWRALTDSVNSMADNLTDQVRNIAQVTTAVAQGDLSQK
                     ITVDARGEILQLKNTINKMVDQLSAFAREVTRVAREVGTEGKLGGQAEVEGVSGTWKR
                     LTENVNQLAGNLTTQVRAIAEVATAVTRGKLDRTITVDAPGEVGELKDNINQMIENLR
                     ETTIANQQQDWLKSNLARIGAALQGQRDLAAVSRLIMSELTPLVDAQLGAFFMAEYAE
                     GPADGEGPELVFRLLAGYGVKPRRSKPYALGEGLIGQAALEKKIVLLSEVPKGYLRIG
                     SGLGSASPSHVVVLPVLFEDRVLGVIELASLHPFTDAHRAFLAQIVETVGVVLNTIIA
                     TTQTEVLLEQSQSLATELQSRSAELQARQRELQNTNAELEDKALQLERQNRAIEVKNA
                     EIELARRELEDRAEQLALSSKYKSEFLANMSHELRTPLNSLLILAKLLAENPEGTLTP
                     RQVEFATSIRDAGYDLLALISDILDLSKVEAGKMDIAIRPVKVFALCRDLEQTFRPIA
                     GQQELDFTVVVDEGLPEMIPTDEHRVQQILKNLLSNAFKFTEEGSVTLRIERAPQGNR
                     FFNAALEGTPEVLAFSVVDSGIGIDSDKLLVIFEAFQQAEGTTNRKYGGTGLGLSISR
                     EIARLLGGEIQVESEPGKGSTFTLYLPALGTGLEQSPPATAVKELPAPLSVGAEREEA
                     DDAAVYAGLAGSRILIVDDDVR"
BASE COUNT          301 a          814 c          772 g          399 t
ORIGIN      
        1 cggacgtcgt cgtcgacgat gaggatcctc gaccccgcca gcccggcgta gacggcggcg
       61 tcgtcggcct cctcccgctc ggcgccgacg ctcagcggcg ccggcagctc cttcaccgcg
      121 gtggccggcg gcgactgctc caggcccgtg cccaacgccg gcaggtacag cgtgaacgtc
      181 gagcccttgc cgggctcgct ctccacctgg atctcgccgc cgaggagacg ggcgatctcc
      241 cggctgatcg acaggccgag cccggtgccg ccgtacttgc ggttcgtcgt gccctcggcc
      301 tgctggaagg cctcgaagat caccaggagc ttgtcggagt cgatcccgat gccactgtcg
      361 acgaccgaga aggccagcac ctcgggcgtg ccctccagcg cggcgttgaa gaaccggttg
      421 ccctgcggcg cccgttcgat ccgcagcgtc accgacccct cctcggtgaa cttgaaggcg
      481 ttggacagca ggttcttcag gatctgctgc acccggtgct cgtcggtggg gatcatttcg
      541 ggcaggccct cgtcgacgac gaccgtgaag tccagctcct gctggccggc gatcggccgg
      601 aaggtctgct ccaggtcccg gcacagggcg aacaccttga ccggccggat ggcgatgtcc
      661 atcttcccgg cctcgacctt ggacaggtcg aggatgtcgg agatcagcgc cagcaggtcg
      721 tagccggcgt cccggatcga ggtggcgaac tcgacctggc ggggggtcag cgtgccctcc
      781 gggttctcgg cgagcagctt ggccaggatc agcaggctgt tcagcggggt gcgcagctcg
      841 tggctcatgt tggccaggaa ctcggacttg tacttcgacg acagcgccag ctgctcggcc
      901 cggtcctcca gctcccggcg ggccagctcg atctcggcgt tcttgacctc gatcgcccgg
      961 ttctgccgct ccagctgcag cgccttgtcc tccagctcgg cgttggtgtt ctgcagctcg
     1021 cgctggcggg cctggagttc ggccgaccgg ctctgcagct cggtggccag cgactgcgac
     1081 tgctccagca gcacctcggt ctgggtggtg gcgatgatcg tgttgagcac gacgccgacg
     1141 gtctcgacga tctgtgccag gaacgcccgg tgggcgtcgg tgaacgggtg cagcgacgcc
     1201 agctcgatca ccccgagcac ccggtcctcg aacagcaccg gcagcacgac gacgtggctg
     1261 ggcgaggccg atcccagccc ggagccgatg cgcaggtagc ccttgggcac ctcggagagc
     1321 aggacgatct tcttctccag ggccgcctgg ccgatcaggc cctcgccgag ggcgtacggc
     1381 ttcgagcgcc gcggcttgac cccgtagccg gccagcagcc ggaacaccag ctcgggcccc
     1441 tccccgtccg ccggcccctc ggcgtactcg gccatgaaga acgccccgag ctgggcgtcg
     1501 accagcggcg tcagctcgga catgatcagc cgggacaccg ccgccaggtc ccgctggccc
     1561 tgcagggcgg cgccgatgcg ggccaggttc gacttcagcc agtcctgctg ctggttggcg
     1621 atcgtcgtct cgcgcaggtt ctcgatcatc tggttgatgt tgtccttcag ctcgccgacc
     1681 tcgcccgggg cgtcgacggt gatcgtccgg tcgagcttgc cccgggtgac cgcggtggcc
     1741 acctcggcga tcgcccgcac ctgggtggtc aggttcccgg ccagctggtt gacgttctcg
     1801 gtcagccgct tccaggtgcc cgacaccccc tcgacctcgg cctggccgcc gagcttgccc
     1861 tcggtgccga cctcgcgggc gacccgggtg acctcccgtg cgaaggcgga gagctggtcg
     1921 accatcttgt tgatcgtgtt cttcagctgc aggatctcgc cccgggcgtc gacggtgatc
     1981 ttctgcgaca ggtcgccctg ggccaccgcc gtggtcacct gggcgatgtt gcgcacctgg
     2041 tcggtcaggt tgtcggccat tgagttcacc gagtcggtca gcgcccgcca ggtacccgac
     2101 acccccttga cctgggcctg gccgccgagc ttgccctcgg tgcccacctc gcgcgcgacg
     2161 cgcgtcacct cgtcggcgaa cgacgagagc tggtcgacca tggtgttgat cgtgttcttg
     2221 agcgagagga tctcgccctt cacgtcgacg gtgatcttcc ggctcaggtc gccggcggcg
     2281 accgcc
//
LOCUS       DATGJT010000341         2402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_45122, whole genome shotgun sequence.
ACCESSION   DATGJT010000341 DATGJT010000000
VERSION     DATGJT010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45122"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VKX24_05890"
     CDS             <1..193
                     /locus_tag="VKX24_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007388314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HLJ08047.1"
                     /translation="AMLSRLLEDHEIIITKVREGITKTADNRDDGTNDMLMSDVLRRH
                     ELQVWFLAEHLVDTPLVRA"
     gene            209..2260
                     /gene="ftsH"
                     /locus_tag="VKX24_05895"
     CDS             209..2260
                     /gene="ftsH"
                     /locus_tag="VKX24_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010261954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HLJ08048.1"
                     /translation="MATAADAPGSRRAEPRTDASDDHSDERPPWKVEGARPQRRPGRI
                     TDDRGRPRLSFWTMLAIALVVNWLVSSVMLQGASRTEIPYTFFRAQVEAGNVSEITST
                     EDAIQGHFKAEVKYPPGKDGAAVQRFSTHRPSFADDDLFKLLSDKGVVVNAKSPPGPS
                     LLERLLVGFGPTLLLVGLIFFASRRMAAGGGLGGLGGIGKSKALRYDPEAGKRVTFAD
                     VAGIDDVEDEVAEIVDFLKNPDRYRRLGATVPKGVLLSGPPGTGKTLLARALAGEADV
                     PFFSVSASEFIEMIVGVGASRVRDLFEQAKKAAPAIIFIDELDAIGRARGGATSVGGH
                     DEREQTLNQILTEMDGFTGTEGVVVLGATNRPEILDPALLRPGRFDRRLTISPPDQAG
                     RKAILEVHVRNVPLGDDVDLEVLASSTPGMVGAELKNLINEAAILAARRSEERVSLAD
                     FNDALEKIVLGTARRVVMPADERRRTAYHEGGHALLGMLTPGADPVRKISIIPRGHAL
                     GVTFQSPDADRYGYSKSYLIGRLTGALGGRAAEQLVYGEVSTGAESDLEQATRIARQM
                     VGRWGMSPAIGPVSVLPGPGQEPMLGFDGHGPAPATRELLDTEVRRLLDEAATEAEKT
                     LSEHRSSLDALVEALLKAETLDADEAYRAAGVPRRPGPGEIRIDEPAPAAPQSTPVDA
                     G"
BASE COUNT          388 a          871 c          829 g          314 t
ORIGIN      
        1 ggcgatgctg tcgcggctgc tcgaagacca cgagatcatc atcaccaagg tgcgggaggg
       61 catcaccaag acggccgaca accgggatga cggtacgaac gacatgctca tgagcgacgt
      121 gctgcgccgc cacgagctgc aggtctggtt cctggccgag cacctggtgg acaccccgct
      181 cgtccgggcg taacggggat ccccgatcat ggcgacagcg gctgacgcac cgggctcgcg
      241 acgggcggag cccaggaccg acgcctccga cgaccactcc gacgagcggc caccgtggaa
      301 ggtggaaggg gcccgtccgc agcggcgccc cggccgcatc accgacgacc gggggcggcc
      361 acgcctgtcg ttctggacga tgctggcgat cgcgctggtg gtgaactggt tggtgtcttc
      421 cgtgatgctc cagggcgcca gccgaaccga gatcccctat acgttcttcc gggcccaggt
      481 cgaggcgggc aacgtttcgg agatcacatc gaccgaggac gccatccagg gccacttcaa
      541 ggcggaggtg aaatatccgc cggggaagga cggcgccgcc gtccaacgat tcagcaccca
      601 ccgcccgagc ttcgccgacg acgacctctt caagctcctg tccgacaagg gcgtcgtggt
      661 caacgccaaa tcaccgccgg gaccgtcgct cctcgagcgg ctcctcgtcg gcttcggccc
      721 gacgctgctg ttggtcgggc tgatcttctt cgcctcccgc cggatggcgg cgggaggcgg
      781 ccttggcgga ctcgggggga tcggcaaatc gaaggccctc cgctacgacc cggaggccgg
      841 caagcgggtc accttcgccg acgtggccgg cattgacgac gtcgaggacg aggtcgccga
      901 gatcgtcgac ttcctcaaga acccggaccg gtaccgccgc ctcggcgcca ccgtccccaa
      961 aggcgtcctc ctgtccgggc cgcccggcac gggaaagacg ctgctggccc gggcgctggc
     1021 cggcgaagcc gacgtgccct tcttctccgt ttccgcctcg gagttcatcg agatgatcgt
     1081 cggcgtcggc gccagccgcg tccgcgacct gttcgagcag gccaagaagg cggcgccggc
     1141 catcatcttc atcgacgagc tcgacgccat cggccgggcc cgaggcggcg ccacgagcgt
     1201 cggcggacat gacgagcggg aacagacgct caaccagatc ctcaccgaga tggacgggtt
     1261 caccggcacc gaaggggtgg tcgtcctcgg cgccaccaac cgccccgaaa tcctcgaccc
     1321 cgcactcctg cggcccggcc ggttcgaccg gcgcctcacc atcagcccgc ccgaccaggc
     1381 cgggcggaag gccatcctcg aggtccacgt ccgcaacgtc ccgctcggcg acgacgtcga
     1441 cctggaggtg ctcgcatcgt ccacgccggg aatggtcggg gcggagttga agaacctgat
     1501 caacgaagcg gccattctcg ccgcccgacg cagcgaggaa cgggtgtcgc tggccgactt
     1561 caacgacgcc ctggagaaga tcgtcctcgg gacggcgagg cgggtcgtca tgcccgccga
     1621 cgagcggcgc cggaccgcct accacgaagg gggccacgcg ctgctcggaa tgctcacccc
     1681 cggcgcggac cccgtacgga agatctcgat catcccccgg ggccacgcgc tcggcgtgac
     1741 gttccagagc ccggacgccg accggtacgg ctactcgaag agctacctca tcggccggct
     1801 caccggcgcg ctcggcggcc gggccgccga gcaactggtc tacggggagg tgagcaccgg
     1861 tgcggagagc gacctggaac aggcgacccg gatcgcccgg cagatggtcg gccggtgggg
     1921 gatgtctccg gccatcggcc ccgtgtcggt ccttccgggg cccgggcagg agccgatgct
     1981 cggcttcgac gggcacgggc cggcccccgc cacccgtgag ctgctcgaca ccgaggtccg
     2041 gcgcctcctg gacgaggcgg ccacggaggc ggagaagaca ctcagcgagc accgatcgag
     2101 cctcgacgcc ctcgtggagg cactcctgaa agcggagacg ctcgacgccg acgaggccta
     2161 ccgcgccgcc ggggtccccc gccgccccgg ccccggcgaa attcggatcg acgagcccgc
     2221 tcccgccgcc ccgcagtcaa cccccgtcga cgccggctga tgccgagggt cggtcccgtc
     2281 ggcccaggcg gcgctggtgg ttcgtctacc ggtcgttgag ggggacgacc agggccgggt
     2341 tccgcgacca gtggaccatg tcggcggcgc cggacccgag catgacacgg cgcagcccgg
     2401 tg
//
LOCUS       DATGJT010000342         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_45199, whole genome shotgun sequence.
ACCESSION   DATGJT010000342 DATGJT010000000
VERSION     DATGJT010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45199"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VKX24_05900"
     CDS             <1..304
                     /locus_tag="VKX24_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009978581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1360 domain-containing protein"
                     /protein_id="HLJ08049.1"
                     /translation="SRLITKDPVTSPLRAPFTRYEGVAGPAELKEGVRGSGVRKAVGE
                     LISCPFCISQWVATGFTFGLVVAPRATRWTASVFASLALADFLQFGYAWAEQRAEG"
     gene            591..1364
                     /locus_tag="VKX24_05905"
     CDS             591..1364
                     /locus_tag="VKX24_05905"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ08050.1"
                     /translation="MPGPAEQLDLGRRVAEGDEAAKWEMVEANLRLVVYWAKRYQRSG
                     MDFLDLVQEGTIGLVRAVEKFDWTKGYQFSTYATWWTRQALQRGIQRTRTTIYVPADA
                     ADRRRALEKIVEDLEERLGRPPTDEEIVAESGLAAEQVEAAFDVAQVVASLDQPARAG
                     GETTLGELAAADQTAAVEDAVLEDVASDELHRAVKRLPALERSVVEVRFGLAGEAPAG
                     VTAAAAKLHMSRRRLRDVEARALALLAESPELAGGAQAA"
     gene            1514..>2087
                     /locus_tag="VKX24_05910"
     CDS             1514..>2087
                     /locus_tag="VKX24_05910"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ08051.1"
                     /translation="MILRPAVAADRPLLVAAFERLSPESRYRRFFAPVKSMSGPLLDY
                     LTAIDYVDHFAWAAIAAEPGPLGDPYGVGVSRYIRLADPAAAEMAVTVVDDWQGKGLG
                     RILLDALVLEALENGIERLEGDVLDENRPMHELLRRTGARFRAEGNGILRFSIDLPAR
                     EEALAGSPFADVLRALAKGEVSLYEREPCPW"
BASE COUNT          296 a          752 c          752 g          287 t
ORIGIN      
        1 gagcaggctg atcaccaagg atccggtcac cagcccgctg cgggcgccgt tcacccgcta
       61 cgagggcgtg gccggaccgg ccgagctcaa ggagggcgtg cggggttcgg gggtccgcaa
      121 ggcggtcggc gaactgatca gctgcccctt ctgcatcagc cagtgggtgg ccaccgggtt
      181 caccttcggc ctggtggtgg cgccccgggc gacccgctgg acggcgtcgg tgttcgcttc
      241 cctggccctg gccgactttc tgcagttcgg ctacgcctgg gcggaacaac gggcagaagg
      301 ctgatgttgg gagggtcggc gtcacatccg cccccttcgc ccgttacgta ccgagcgggg
      361 tgcttaagaa agggggtagg gcttgccgac aggcccaaga gaggccccgt gatggagaat
      421 tagggcagaa cttgcggaac acgtcgcccc gccacgacgt tgtaccggtg cccggcaaaa
      481 aaatctacaa ggagtgagcg gccatcagca ccaaggctac ccatcgagac cttagcggtc
      541 cctccctcga tctggcgcgg ctctacctcg aggagatcgg cgcccgggcc gtgcccgggc
      601 ccgccgagca gctcgacctg ggccggcgcg tcgccgaggg tgacgaggcg gccaagtggg
      661 agatggtcga ggccaacctg cgcctcgtcg tctactgggc caagcggtac cagcgctcgg
      721 ggatggactt cctggacctc gtccaggaag gcacgatcgg cctggtccgg gccgtcgaga
      781 agttcgactg gaccaagggc taccagttct ccacctacgc cacctggtgg acccgccagg
      841 ccctccagcg gggcatccag cggacccgca cgaccatcta cgtcccggcc gacgccgccg
      901 accggcgacg ggcgctcgag aagatcgtcg aagacctcga ggagcgcctc ggccggcccc
      961 ccaccgacga ggagatcgtc gccgagtccg gcctggccgc cgagcaggtc gaggcggcct
     1021 tcgacgtcgc ccaggtcgtg gcctcgctcg accagcccgc ccgggccggc ggcgagacga
     1081 ccctcggcga gctggccgcc gccgaccaga cggcggccgt ggaagacgcc gtcctggaag
     1141 acgtggccag cgacgagctc caccgggccg tcaagcgcct cccggcgctg gagcggtccg
     1201 tggtcgaagt gcgcttcggc ctggccggcg aggcgccggc cggtgtgacc gccgccgccg
     1261 ccaagctgca catgtcccgc cgccgcctcc gcgacgtgga ggcccgggcg ctggccctgc
     1321 tggccgagag cccggagctg gccggcgggg cgcaagccgc ctgagggtta tgcgagagcc
     1381 cgggtcggac gaggttccgg cccgggctcc gtcgccttca ggatcagggc gtccgggatc
     1441 agggcgtccg ggcctctcgc ccctctacat cgccgcccgg acgtcgcaga tcacattgcg
     1501 ggacgggagc cgcgtgatcc tgcggcccgc cgtcgccgcc gaccggccgc tcctcgtcgc
     1561 ggccttcgag cgcctgtcgc cggagtcgcg ctaccggcgc ttcttcgccc cggtgaagtc
     1621 gatgtcgggg ccgctcctcg actacctgac ggcgatcgac tacgtcgacc acttcgcctg
     1681 ggcggccatc gccgccgagc cgggcccgct cggcgatccc tacggcgtcg gcgtctcccg
     1741 ctacatccgg ctggccgacc cggcggcggc cgagatggcc gtcacggtgg tcgacgactg
     1801 gcagggaaag gggctcggcc ggatcctcct cgacgccctg gtcctcgagg cgctcgagaa
     1861 cgggatcgag cggctggagg gcgacgtcct cgacgaaaac cggccgatgc acgaactgct
     1921 ccggcggacg ggcgcccgct tccgggcgga gggcaacggg atcctgcggt tctcgatcga
     1981 cctcccggcc cgcgaggagg ccctggccgg ctcgccgttc gccgacgtcc tgcgagcgct
     2041 ggccaagggc gaggtctcgc tctacgagcg ggagccgtgc ccctggc
//
LOCUS       DATGJT010000343         5574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1183248, whole genome shotgun sequence.
ACCESSION   DATGJT010000343 DATGJT010000000
VERSION     DATGJT010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5574
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1183248"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VKX24_05915"
     CDS             complement(<1..874)
                     /locus_tag="VKX24_05915"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HLJ08052.1"
                     /translation="MSAVVAAPPAGVPEVGRFRATKLPAVAERTFGTGLRVLAVRKPG
                     LPLVQARMMLPAARPGAGDADRARQHVLAETLLAGTERRGSVELAEALQRMGAAVAVQ
                     LDSGDLRLQGSTLSPSLSEFLSLVGEVLVEPAFPGDEVAIERIRKAQEVELRRADPAV
                     VARAALKRRLFGSHPYAGGLPDPDVVAGVRAADLRRYFATRVSARGGLLILVGDLRPA
                     KALDVAEAALGGWGGAGRAAALPPLPPIEPGPILVVDRPGAAQSNVRIGGPALTRLDP
                     GLPALLLANMIFGGY"
     gene            complement(871..2187)
                     /locus_tag="VKX24_05920"
     CDS             complement(871..2187)
                     /locus_tag="VKX24_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013475244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLJ08053.1"
                     /translation="MPAKTRRTRPPVPAFPVHRFRLDNGLRVVLLPDSSAPTVAIAVV
                     YDVGFRSEPEGMTGFAHLFEHLMFEGSVTLAKGQHDKLVTGNGGVMNGSTRADYTNYY
                     EQLPSNALELGLYLEADRMRGLRLSDENVANQIAVVKEEIRVNVVNQPYGGFPWIQLP
                     PVMFRTFANAHNGYGSFVDLEAASVEQAAAFFDRYYAPGNAVLVVAGDLDVETTTGMV
                     ERHFGPLPARPVPPPVSFGEPVPSEERRGVEHDPLAPLGAVAVAYRVPDPITELEDYL
                     AAAVLADVLAEGTASRLHQRLVKRDQLATRVGGLLGTFGDPFDVRDPTMLQLVAFHPP
                     GAVEPLLAALDEEVAAVAAGAATAGEVDRVVTTMTAQILRGLDDIMNRALAAGVAEQQ
                     RGRAELVSELPALLAAVTPDDITGVAGRWLQPDSRAVLEVVPGAAR"
     gene            complement(2238..3464)
                     /locus_tag="VKX24_05925"
     CDS             complement(2238..3464)
                     /locus_tag="VKX24_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011720287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08054.1"
                     /translation="MTVDSIRVALRGMLANRMRSLLTMLGILIGTAAVILLVAVGTGI
                     SNLVQTQIEKLGSNAVYIFPQQGTRGGRDRGGTNARQIRLTQSDVDALTDKSRAPDIS
                     AVAPTVQTGVTAVADGTTYALSNFTGTTPVYAQIRNATLSAGRFFDDGDEANHAKVAV
                     IGQTVVEHLWSAGFNPVGQDVDFNGIRFRIIGMLQKKGSSGIGDQDDVVIAPLTTVKD
                     SLVGNVDSYSLIAVQAASRQQTDAAQAEAMAVLRETHNLRPGQPLDFQIFNQASLLNT
                     GKAAALVFSLLLAAVAAISLFVGGIGVMNIMLVTVTERTREIGIRKALGAHKVDILSQ
                     FLVEAVLLALIGGGFGVAIGVGLAHVHVGPLRPVVSAGSILVSFVVSALVGVFFGAYP
                     ANRAANLTPIEALRFE"
     gene            complement(3568..4623)
                     /locus_tag="VKX24_05930"
     CDS             complement(3568..4623)
                     /locus_tag="VKX24_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020514290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLJ08055.1"
                     /translation="MNDDALDEFYAELHRHHLEALWRINSTIMPFEPKPRARAWLWRH
                     GDLLRLAELAGKLVPIDRGGDRRVLAAVNPGLAEAYGDAVYGATATLWGAVQYLGPHE
                     SAPAHRHSPSALRFVVEGSGAWTTVDGERLAMAPGDLVLTPPYAWHDHQNDSDEPMAW
                     FDGLDLPLACYLDAQFFELHPSGALQEPGSGGTPPPAGARPGARSTVLRYPWAETEAA
                     LEGRRVQPDPYDDVHIRFTNPGTGGPVLPTLDATIQMLRAGIRTMPHRHVHSTVYQVF
                     RGRGETIVDGVRFSWERGDLFALPPWVVHEHHAPDNDAVLFSITDAPVLGVLGLERVL
                     GFTAGQTVTGDFDPGSR"
     gene            complement(4620..>5574)
                     /locus_tag="VKX24_05935"
     CDS             complement(4620..>5574)
                     /locus_tag="VKX24_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013399840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ08056.1"
                     /translation="GPDTVYLVALPAAHNFPLGCPGLMGTLAAGGRVVMAPSARPEDA
                     MAVVEAERVTITALVPALVIRWLEANAGGRFDLGSLEVLQVGGARLVPEVARRVGPAF
                     GCRVQQVFGMAEGLLNYTRLDDPDDVVVETQGRPLSPADEFLVVGPDGQPVPVGEAGE
                     LLTRGPYTIRGYYRAEAHNAAAFTADGFYRSGDIVRLHPSGNLTVEGRAKDLINRGGE
                     KISAEEIENLLIAHPAVREAAAVAMPHPVLGEQICAYLVLRPDETVDLAQLSAYLEQR
                     GVARFKWPERIEVVEALPVTNVGKVDKKKLRDDIAAKGRGE"
BASE COUNT          761 a         1969 c         2096 g          748 t
ORIGIN      
        1 agtagccgcc gaagatcatg ttggccagca gcagggccgg aaggccgggg tcgaggcggg
       61 tcagggcggg gccgccgatc cggacgttgc tctgtgccgc gccgggccgg tcgacgacga
      121 ggatcggccc gggttcgatc ggcggcagcg gcggaagggc ggcggcccgc ccggcgccgc
      181 cccagccgcc gagggcggcc tcggccacgt cgagggcctt ggccgggcga aggtcgccga
      241 ccaggatcag caggccgccc cgggcgctga cccgggtggc gaagtaccgg cggaggtccg
      301 cggcccgcac gccggccacc acgtcggggt cggggagccc gccggcgtag gggtgcgacc
      361 cgaacaggcg tcgtttcagc gccgcccggg cgacgaccgc cgggtccgcc cgtcgcagct
      421 ccacctcctg cgccttgcgg atgcgctcga tcgccacctc gtcgcccgga aaggccggct
      481 cgaccagcac ctcgcccacc agcgagagga actcggacag cgacggcgac agcgtcgagc
      541 cctgcaaccg caggtcgccg ctgtcgagct ggacggccac ggcggcgccc atgcgctgca
      601 gcgcctccgc cagctccacg ctgccgcggc gctccgtgcc cgccagcagc gtctcggcca
      661 gcacgtgctg ccgggcccgg tcggcgtcac cggcgccggg gcgggcggcg ggaagcatca
      721 tgcgggcctg gaccagcggg aggcccggct tgcggaccgc caacacccgc agcccggtgc
      781 cgaaggtgcg ctcggcgacc gcgggcagct tggtggcgcg gaaccgcccg acctcgggca
      841 ccccggccgg gggggcggcg accacggcgc tcaccgggcc gccccgggga cgacctcgag
      901 gactgcccgg ctgtccggct gcagccaccg gcccgccacg ccggtgatgt cgtcgggggt
      961 gacggccgcc aggagggccg gcagctcgct caccagctct gcccggccgc gctgctgctc
     1021 ggcgacgccc gccgccagcg cccggttcat gatgtcgtcg aggccccgca ggatctgcgc
     1081 cgtcatcgtg gtcaccaccc ggtcgacctc gccggcggtg gccgcgccgg ccgccaccgc
     1141 cgccacctcc tcgtcgaggg cggccaggag cggttcgacg gcgcccggcg ggtggaaggc
     1201 cacgagttgc agcatcgtcg gatcccgaac gtcgaacgga tccccgaagg tcccgaggag
     1261 gccgccgacg cgggtcgcca gctggtcccg cttcacgagc cgctggtgaa ggcgcgacgc
     1321 cgtcccctcg gccaggacgt cggcgaggac ggcggcggcc aggtagtcct cgagctccgt
     1381 gatcgggtcc ggcacccggt aggcgacggc caccgccccg agcggggcca gcgggtcatg
     1441 ctcgactccc cgtcgctcct ccgaggggac tggttcgccg aacgacacgg gcggcgggac
     1501 cggtcgggcc ggcagggggc cgaagtggcg ctccaccatg ccggtcgtcg tctcgacgtc
     1561 gaggtcgccg gccaccacca ggacggcgtt gcccggcgcg tagtagcggt cgaagaaggc
     1621 cgccgcctgc tccacgctgg cggcctccag atcgacgaag ctgccgtagc cgttgtgggc
     1681 gttggcgaac gtccggaaca tgaccggagg cagctggatc caggggaagc cgccgtaggg
     1741 ctggttgacg acgttgaccc ggatctcctc cttcaccacg gcgatctggt tggccacgtt
     1801 ctcgtcgctc aggcgcaggc cccgcatccg gtcggcctcg aggtagagcc cgagctcgag
     1861 ggcgttggac ggcagctgct cgtagtagtt ggtgtagtcg gcccgggtgc tgccgttcat
     1921 caccccgccg ttgccggtga cgagcttgtc gtgctggccc ttggccagcg tcaccgatcc
     1981 ttcgaacatc aggtgctcga agaggtgggc gaaaccggtc atgccctccg gctcggaccg
     2041 gaacccgacg tcgtagacga cggcgatcgc caccgtcggc gccgaggagt cgggcaggag
     2101 cacgacccgc aggccgttgt cgagccggaa ccggtggacc ggaaaggcgg ggacgggcgg
     2161 ccgcgtacgg cgggtcttcg caggcatgcc gccacgctaa cggaatgcgc cggacgggcc
     2221 cggcgtgcgc cgggccgcta ctcgaagcgc agcgcctcga tcggcgtcag gttggcggcg
     2281 cggttggcgg gataggcgcc gaagaacacg ccgaccagcg ccgagacgac gaacgacacg
     2341 aggatcgagc cggcggagac gaccggccgg agcgggccga cgtggacgtg ggcgaggccg
     2401 acgccgatag ccaccccgaa gcctccgccg atcagcgcca gcagcaccgc ttcgacgagg
     2461 aactggctca ggatgtcgac cttgtgggcg ccgagggcct tgcggatgcc gatctcccgg
     2521 gtccgctcgg tcaccgtcac cagcatgatg ttcatcaccc cgatcccccc gacgaagagc
     2581 gagatggcgg ccacggcggc cagcagcagg ctgaagacga gggccgcggc cttgccggtg
     2641 ttgaggaggc tggcctggtt gaagatctgg aagtcgagcg gctggccggg gcggaggttg
     2701 tgcgtctccc gcagcacggc catggcctcg gcctgggcgg cgtcggtctg ctggcgggag
     2761 gcggcctgga cggcgatcag cgagtagctg tcgacgttgc cgacgaggga gtccttcacc
     2821 gttgtcagcg gggcgatgac gacgtcgtcc tggtcgccga tgccgctcga gcctttcttc
     2881 tgcagcatcc cgatgatccg gaagcggatg ccgttgaagt cgacgtcctg gccgaccggg
     2941 ttgaaccccg cgctccagag gtgttccacc acggtctggc cgatcaccgc caccttggcg
     3001 tggttggcct cgtcgccgtc gtcgaagaac cggccggccg aaagggtggc gttgcggatc
     3061 tgggcgtaga ccggcgtcgt cccggtgaag ttcgacaggg cgtaggtcgt gccgtcggcc
     3121 acggcggtga cgccggtctg caccgtcggc gccacggccg agatgtccgg cgcccggctc
     3181 ttgtcggtca gggcgtcgac gtcgctctgg gtcaggcgga tctggcgggc gttcgtcccg
     3241 ccccggtccc gcccgccccg ggtcccctgc tgggggaaga tgtagacggc gttcgacccc
     3301 agcttctcga tctgcgtctg cacgaggttg gagatgcccg tccccacggc caccagcagg
     3361 atgaccgccg ccgtcccgat caggatgccg agcatggtga gcagcgagcg catgcggttg
     3421 gcgagcatgc cccgcaaggc gacgcggatg ctgtcgacgg tcattggcgg cctcaccccc
     3481 cggctggtga cgggcgccat cctattacaa tgtggcacct agtgccaaaa acggtctctc
     3541 agccggaccc cagccgggtc gccggtgtca gcgggaaccg gggtcgaagt cgccggtgac
     3601 cgtctggccg gcggtgaacc cgagcacccg ttcgaggccg aggacgccga gcaccggggc
     3661 gtcggtgatc gagaacagca cagcgtcgtt gtcgggagcg tggtgctcgt gcaccaccca
     3721 cggcggaagg gcgaacaggt cgccccgttc ccaggagaac cgcaccccgt cgacgatcgt
     3781 ctccccccgt ccccggaaca cctggtacac ggtggagtgg acgtggcggt ggggcatcgt
     3841 gcggattccg gcccggagca tctggatggt ggcgtcgagc gtcgggagga cgggcccgcc
     3901 ggtgccggga ttggtgaacc ggatgtggac gtcgtcgtag ggatcgggct ggacccgccg
     3961 gccctcgagc gccgcttcgg tctcggccca gggatagcgc agcaccgtcg agcgggcgcc
     4021 ggggcgggct cccgccggcg gcggcgtgcc cccggagccc ggctcctgca gcgccccgga
     4081 ggggtggagc tcgaagaact gggcgtcgag gtagcaggcc agcgggaggt cgagcccgtc
     4141 gaaccacgcc atcggctcgt cggagtcgtt ctggtggtcg tgccaggcgt agggcggcgt
     4201 caggacgaga tcgccgggcg ccatcgccag ccgctcgccg tccaccgtcg tccacgcccc
     4261 cgatccctcg acgacgaagc gcagcgccga ggggctgtga cggtgggccg gcgccgactc
     4321 gtggggcccg aggtactgca ccgctcccca cagcgtggcg gtggcgccgt agaccgcgtc
     4381 gccgtaggcc tcggccaggc ccgggttgac ggcggccagc acgcggcggt cgccgccccg
     4441 gtcgatcggc accagcttgc cggccagctc ggccaggcgg agcaggtcgc cgtggcgcca
     4501 cagccaggcc cgggcccggg gcttgggctc gaagggcatg atcgtcgagt tgatgcgcca
     4561 cagcgcctcg aggtggtggc ggtgcagctc ggcgtagaac tcgtcgaggg cgtcgtcgtt
     4621 cattcgcctc tccctttggc ggcgatgtcg tcccgcagct tcttcttgtc gacctttccg
     4681 acgttggtca ccggcagggc ctcgacgacc tcgatccgct ccggccactt gaagcgggcc
     4741 acgccccgct gctcgaggta ggccgacagc tgggccaggt cgacggtctc gtcgggccgc
     4801 agcacgaggt aggcgcagat ctgctcgccg aggacggggt ggggcatggc caccgccgcc
     4861 gcctcccgca ccgcgggatg ggcgatcagc aggttctcga tctcctcggc cgagatcttc
     4921 tccccgcccc ggttgatgag gtccttggcc cgtccctcga cggtcaggtt gccggacggg
     4981 tggaggcgga cgatgtcgcc gctgcggtag aacccgtcgg cggtgaaggc ggcggcgttg
     5041 tgggcctcgg cccggtagta gccccggatc gtgtacggcc cccgggtcag gagctcgccg
     5101 gcctcgccga cgggcaccgg ttggccgtcg ggcccgacga cgaggaactc gtcggccggc
     5161 gacagcggcc ggccctgcgt ctcgacgacg acgtcgtcgg ggtcgtcgag gcgggtgtag
     5221 ttgagcaggc cctcggccat cccgaacacc tgctgcaccc ggcagccgaa ggccggcccg
     5281 acccggcggg ccacctcggg cacgaggcgg gcgcccccga cctgcagcac ttcgaggctc
     5341 ccgaggtcga accgcccgcc ggcgttggcc tccagccacc ggatgacgag cgccggcacc
     5401 agcgcggtga tcgtcacccg ttccgcctcc accacggcca tggcgtcctc cggtcgggcc
     5461 gagggggcca tgaccacccg cccgccggcg gccagcgtcc ccatcaggcc ggggcagccg
     5521 agggggaagt tgtgggccgc cggcagcgcc accaggtaga cggtgtcggg gccg
//
LOCUS       DATGJT010000344         2479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_357523, whole genome shotgun sequence.
ACCESSION   DATGJT010000344 DATGJT010000000
VERSION     DATGJT010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357523"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1116)
                     /locus_tag="VKX24_05940"
     CDS             complement(<1..1116)
                     /locus_tag="VKX24_05940"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HLJ08057.1"
                     /translation="MWRRGASVVGIAVTFGAIGLSPVRAAPPATGSVTVSVNPGHPRA
                     SFRADEAFGGAVDGHEHGAVDRLYRPGNLAAMRSAGLGPLAYRLRTELGDEAWHWNPE
                     GRWSDPARQRGYWTSSATSSVPIDASYGYRLPRRGNTVDQANDDGYSRIDDGDPSTFW
                     KSNPYLDRHFTGEPDSAHPQWVVVDLGRTVGVDRARISWGVPYATRFSLQYWTGDDDP
                     FWPDDPQWRWQDFPRGDIGNGAGGESALRLASAPIPVRYLRLLLTRSSGRAPAGSSDL
                     RDGLGYAVREFEVGVDDGAGAFHDLIRHGRSKAAQSVVTVSSTDPWHRAADIDPDTEQ
                     PGFDRVWRSGLTNGLPAVVPVPVLFGTPEDARAELSFL"
     gene            complement(1153..2298)
                     /locus_tag="VKX24_05945"
     CDS             complement(1153..2298)
                     /locus_tag="VKX24_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012919109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ08058.1"
                     /translation="MFLTTDEQEEFRLAVRQMCEDKVAPHAAECDEQAKYPWHAHEAF
                     TAMGLMGLTFPEDCGGSAADHVTWAICIEEIARVDAASSLIPAICDLAMTPVMRYGSK
                     DVQRRFMTPICEGRAQASYCLSEAEAGSDVASMTTRAERDGDEWVINGRKQWITNAGI
                     SDFYTVFAKTDPSAAHRGITAFVVEKDMPGFSIGKLEHKLGIRASPTGEVILEDVRVP
                     HENIVGEEGKGFYYAMGTFDWSRPVIGAQAVGIAQGALDYAANYMQERRTFGQPLTNY
                     QGLQFMVADMAMQIEAARGLVYRAAAMADSNHPDLTRMASMAKCFAGDVAMKVTTDAV
                     QLLGGYGFTKDFPVERMFRDAKITQIYEGTNQIQRMVIARKTFTGVR"
     gene            complement(2325..>2479)
                     /locus_tag="VKX24_05950"
     CDS             complement(2325..>2479)
                     /locus_tag="VKX24_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005086601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HLJ08059.1"
                     /translation="IQTHGGNGLATEYGLATLYGITRLFRTAPVSREMVLNFVAQHSL
                     GLPKSY"
BASE COUNT          348 a          832 c          917 g          382 t
ORIGIN      
        1 gaggaaggac agctcggcgc gggcgtcctc gggcgtgccg aacaacaccg ggacggggac
       61 gacggcgggc agcccgttgg tcagcccgct gcgccacacc cggtcaaaac ccggctgttc
      121 ggtgtccggg tcgatgtcgg cggcccggtg ccaggggtcg gtggagctca cggtcacgac
      181 gctctgggcg gccttcgagc ggccgtggcg gatgaggtcg tggaacgcgc cggcgccgtc
      241 gtcgaccccg acctcgaact cgcgcacggc gtaccccagc ccgtctcgaa ggtcgctcga
      301 accggccggg gcccgacccg agctccgcgt cagcaggagc cgcagatacc ggacgggaat
      361 cggggcggac gccagccgga gggcgctctc gccaccggcg ccgttcccga tgtccccccg
      421 ggggaagtcc tgccagcgcc actgcgggtc gtcgggccag aacgggtcgt catcgcccgt
      481 ccagtactgg agcgagaagc gggtggcgta gggaacgccc caggagatgc gggcgcggtc
      541 gacgccgacc gtccggccga ggtcgacgac gacccattgg ggatgggcgc tgtcgggttc
      601 gccggtgaag tgccggtcga ggtagggatt gctcttccag aaggtcgacg ggtcgccgtc
      661 gtcgatgcgg gagtagccgt cgtcgttggc ctggtcgacg gtgttccccc gccggggaag
      721 ccggtagccg tagctggcgt cgatggggac gctcgatgtc gccgacgacg tccagtagcc
      781 ccgctggcgg gctgggtcgc tccaccggcc ctccggattc cagtgccagg cctcgtcccc
      841 gagctccgtc cgcagccggt aggcgagggg acccagcccg gcggaccgca tggcagccag
      901 gttcccgggc cggtagagcc ggtcgacggc gccgtgctcg tggccgtcga cggcgccgcc
      961 gaacgcctca tcggcccgga agctcgccct cggatgcccc ggattcaccg agaccgtcac
     1021 ggaaccggtg gcgggcgggg cggcgcgcac cgggctgagc ccgatggccc cgaaagtcac
     1081 cgcgatgccc accaccgacg cgccccgccg ccacattcgg ggccgatgtt atcggtgatg
     1141 cccttgtgac cgctaccgca cgccggtgaa cgtcttgcgg gcgatgacca tccgctggat
     1201 ctggttggtg ccctcgtaga tctgggtgat cttggcgtcg cggaacatcc gctcgaccgg
     1261 gaagtccttg gtgaagccgt agccgccgag gagctggacg gcgtcggtgg tcaccttcat
     1321 ggccacgtcg ccggcgaagc acttggccat cgacgccatg cgggtgaggt cggggtggtt
     1381 ggagtcggcc atggccgccg cccggtagac gaggccccgg gcggcctcga tctgcatggc
     1441 catgtcggcc accatgaact gcaggccctg gtagttggtc agcggctggc cgaaggtgcg
     1501 gcgctcctgc atgtagttgg cggcgtagtc gagagcgccc tgggcgatcc ccaccgcctg
     1561 ggcgccgatg accggccggg accagtcgaa ggtgcccatg gcgtagtaga accccttgcc
     1621 ctcctcgccg acgatgttct cgtgggggac gcgcacgtcc tccaggatca cctcgccggt
     1681 ggggctggcc cggatcccga gcttgtgctc cagcttgccg atcgagaagc cgggcatgtc
     1741 cttctccacc acgaaggcgg tgatcccccg gtgcgcggcc gacgggtcgg tcttggcgaa
     1801 gacggtgtag aagtcggaga tcccggcgtt ggtgatccac tgcttgcggc cgttgatgac
     1861 ccactcgtcg ccgtcgcgct ccgccctcgt ggtcatggag gcgacgtcgg agccggcctc
     1921 ggcctccgac aggcagtagc tggcctgggc ccgcccctcg cagatcggcg tcatgaaccg
     1981 ccgctggacg tccttggagc cgtagcgcat gaccggcgtc atggccaggt cgcagatggc
     2041 agggatgagc gacgatgcgg cgtcgacccg ggcgatctcc tcgatgcaga tggcccaggt
     2101 gacgtggtcg gcggccgagc cgccgcagtc ctcggggaag gtcagaccca tcaggcccat
     2161 ggccgtgaag gcctcgtggg cgtgccaggg gtacttggcc tgctcgtcgc attcggcggc
     2221 gtggggcgcc accttgtcct cgcacatctg gcgcacggcc agacggaact cctcctgctc
     2281 gtcggtggtg aggaacatgg ggggactcct cctcaggcgg cgggctagta cgacttcggc
     2341 aatccgagcg agtgctgcgc cacgaagttc agcaccatct cccgggagac gggggccgtg
     2401 cggaagagcc gggtgatccc gtacagcgtg gccaggccgt actccgtggc caggccgttg
     2461 ccgccgtggg tctggatgg
//
LOCUS       DATGJT010000345         2339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_459638, whole genome shotgun sequence.
ACCESSION   DATGJT010000345 DATGJT010000000
VERSION     DATGJT010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459638"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VKX24_05955"
     CDS             <1..691
                     /locus_tag="VKX24_05955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08060.1"
                     /translation="KLRTPGTRAERSGPDGMPAKDTEIAEDDAHDRGNWTPPRRGRRS
                     RRAGTVLSRSVVALTALALAATGAAVTFGFKWSQLSDAAAQQVTVRRVTSTFLTQLTT
                     FKPTTVDADFQALLTFATGDFAKQANQFFGSNIRQQLEQAQAESEGQIRNLYVQSMSA
                     GKAEVYAVVDQTYTNDTIAKAGGQPVADVLRVVLDLAEASGNWKISEVSVLQAPGAAG
                     TPSATVPGAKP"
     gene            complement(742..1569)
                     /locus_tag="VKX24_05960"
     CDS             complement(742..1569)
                     /locus_tag="VKX24_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HLJ08061.1"
                     /translation="MALTLPRSLSPSKLSAFKDCPLAFRFAAIDRLPEAPAPATLKGT
                     LVHEALERLFWEKPRGERSPQAARDALDAAWADIAVGPEATALELDGPAAERFVADAA
                     ALLDNYFRLEDPDAVDAVGVELTLEADVAGLRLRGIVDRLDVTPEGELVVVDYKTGRV
                     PSVMQEQQRLGGVQFYALLCEQVLGKRPVGVRLLYLRDPIAIEAQPSDQAIRGTRQRT
                     AAVWSAIERACQHEDFRPRPSTLCNWCSFRSLCPAVGGDPAQAAAFAAGAEPLSRAG"
     gene            complement(1580..>2339)
                     /locus_tag="VKX24_05965"
     CDS             complement(1580..>2339)
                     /locus_tag="VKX24_05965"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ08062.1"
                     /translation="CGPVLEPLAKSLGSRVHSVAVDERGHGATPRPPDGDFDWHGFAR
                     DVLAVVDELGLDRPLGFGHSCGGAALLLAEEARPGTFAALYCFEPIVLALDEPLPPDL
                     GNPLSVGALRRRSTFASRREAIGNFTSKAPFDRLRPDVLAAYVDNGFMVTSDGALELR
                     CRREDEAEVYAHSLSHDTFAHLDAVRCPVTLACGATTDAMGEDLLRRLAARLPHPSVE
                     VFAGLGHFGPLEDPDVVGASAARALVPDGDTPRA"
BASE COUNT          349 a          814 c          890 g          286 t
ORIGIN      
        1 gaagctgcgc acgccgggca cacgggcaga gcgcagtggg ccggacggca tgccggccaa
       61 ggacaccgag atcgccgagg acgacgccca cgaccggggg aactggacgc ccccgcggcg
      121 gggccggcgg tcccggcgag cgggcaccgt gctgagccgt tcggtggtgg cactgacggc
      181 gctggccctg gcggccacgg gggccgccgt gaccttcggc ttcaagtggt cccagttgtc
      241 ggatgcggcc gcccagcagg tcaccgtcag gcgagtgacg tcgacgttcc tcacgcagct
      301 gaccacgttc aagcccacca ccgtggacgc cgacttccag gcgctgctta ccttcgccac
      361 cggcgacttc gccaagcagg ccaaccagtt cttcgggtcc aacatccgcc agcagctcga
      421 gcaggcgcag gctgagtccg aaggccagat ccgcaacctg tacgtgcagt cgatgtcggc
      481 cggcaaggcc gaggtctacg ccgtggtcga ccagacctac accaacgaca ccatcgccaa
      541 ggcgggtggt cagcccgtgg cggacgtgct ccgggtggtg ctcgacctgg cggaggcgtc
      601 cgggaactgg aagatctccg aggtctcggt gctgcaggcc ccgggcgcgg cgggcacccc
      661 gtcggcgacc gtccccggcg ccaagccgtg acgggtcggc gctgaccgcc cctcgagcca
      721 ggcggtgggc cgggcgggcg gtcagcccgc ccggctgagg ggctcggccc cggcggcgaa
      781 cgcggctgcc tgggcggggt ccccgccgac ggccgggcac agcgaacgga aactgcacca
      841 attacacagt gtcgaaggtc ggggccggaa gtcctcgtgc tggcacgccc gctcgatggc
      901 cgaccacacg gcggcggtgc gctggcgggt gccccggatg gcctggtccg acggctgggc
      961 ctcgatggcg atggggtcgc gcaggtagag gaggcggacc ccgacggggc gcttgcccag
     1021 cacctgttcg cacagcaggg cgtagaactg gacgcccccc aggcgctgct gctcctgcat
     1081 gaccgacggg acccggcccg tcttgtagtc gacgaccacc agttcgcctt cgggggtgac
     1141 atccaggcgg tcgacgatgc cgcgcaggcg aagtccggcc acgtcggcct cgagggtgag
     1201 ctcgacgccc accgcgtcca cggcgtcggg gtcctcgaga cggaagtaat tgtcgaggag
     1261 ggcggcggcg tcggcgacga agcgttcggc ggcgggcccg tcgagctcga gcgcggtcgc
     1321 ctcgggcccc acagcgatgt ccgcccaggc ggcgtcgagg gcgtcccggg ccgcctgggg
     1381 actgcgctcg ccccggggct tctcccagaa caggcgctcc agggcctcgt gcacgagggt
     1441 gcccttgagc gtggccggcg cgggcgcttc gggcaggcgg tcgatggccg cgaagcggaa
     1501 ggcgagcggg cagtccttga aggcgctgag cttcgacggg gacagcgatc gggggagcgt
     1561 cagggccatt gctgtcacgc tacgcccgag gtgtgtcgcc gtcggggacc agggcccgag
     1621 ccgccgacgc gcccaccacg tcggggtcct ccaggggacc gaagtgaccg aggccagcaa
     1681 agacctccac cgacgggtgg ggcaggcgcg ccgccaggcg gcggagcagg tcctctccca
     1741 tggcgtccgt ggtcgccccg caggccaggg tcacggggca gcgcacggcg tcgaggtggg
     1801 cgaaggtgtc gtgggagagg ctgtgggcgt agacctcggc ctcgtcctcg cgccggcacc
     1861 gcagctccag agctccgtct gacgtcacca tgaagccgtt gtcgacgtag gcggccagca
     1921 cgtcgggtcg taaccggtcg aagggcgcct tgctcgtgaa gttgccgatg gcctcccggc
     1981 gcgacgcgaa cgtgctgcga cgccgcaacg ccccgaccga gagggggttg cccagatcgg
     2041 gcggcaatgg ctcgtcgagg gcgagcacga tcggctcgaa gcagtacaac gcggcgaacg
     2101 tccccggacg cgcctcctcg gccaggagca gcgcggcacc gccgcacgag tggccgaaac
     2161 cgagcggacg atcgaggccc agctcgtcga ccacggcgag cacgtcgcgg gcgaagccgt
     2221 gccagtcgaa gtcgccgtcg ggcggcctcg gcgtcgcccc gtggccgcgc tcgtcgacgg
     2281 cgacgctgtg cacgcgcgag ccgagcgact tcgccagagg ctcgagcacg ggcccgcag
//
LOCUS       DATGJT010000346         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_357798, whole genome shotgun sequence.
ACCESSION   DATGJT010000346 DATGJT010000000
VERSION     DATGJT010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357798"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VKX24_05970"
     CDS             complement(<1..428)
                     /locus_tag="VKX24_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08063.1"
                     /translation="MTGVLLAGTGLALASLLGVGATAAPVFAAGAQTTTQSYVLVARD
                     GGIFTYGSGAEFHGSTGGQPLNSPIVAVVERPAHDGYWTVAADGGVFSFGAAAFYGST
                     GGMRLTSPIVGMASTPSGNGYWMVAADGGVFSFGDARFFGS"
     gene            1126..>2032
                     /locus_tag="VKX24_05975"
     CDS             1126..>2032
                     /locus_tag="VKX24_05975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08064.1"
                     /translation="MSLGAHRYCNVLLPSGDREMPLRAAVFEWKSGAWVLFNASKRPF
                     VLRAEGQPALSLAPGGSVALGGTPFVLTVAGASAAAGVGVSTLTAPVAGRPMDGSVAG
                     PEGRCVCGASLPAVTDGRPWDADSAEADLALLRPWAGAETLTAVSADVALFDSAPGTV
                     MGPAPASAPRALPGLAPAPGAWGYAPATRPAAPGRRSGQLVTVLFLAIALVASAAGAS
                     AWQGMHRGAVAAPHPAHWDPRLSDIVSFVEKERGLTFEHPVFVDYLAPDVFRQKLLGP
                     SGPPSAKDRRSMEQTIGFFRTLGLVE"
BASE COUNT          276 a          758 c          691 g          307 t
ORIGIN      
        1 gacccgaaga agcgggcgtc gccgaaggag aacacgccgc cgtcggccgc aaccatccag
       61 tagccgttcc ccgacggcgt cgacgccatc cccacgatcg ggctcgtcag cctcatgccg
      121 ccggtcgagc cgtagaatgc ggcggcgccg aagctaaaga caccaccgtc ggcggcgacg
      181 gtccagtagc catcgtgggc cggccgttcg acgaccgcca cgatcggact gttgagcggc
      241 tgccctccgg tggaaccgtg gaactcggca ccgctgccgt aggtgaagat ccccccgtcg
      301 cgggccacga gcacatagct ctgggttgtc gtctgggcgc cggcggcgaa taccggtgcc
      361 gctgtcgctc ccacccccag caaggaggcg agtgcgagtc ccgtccccgc caggagaacg
      421 ccggtcatgt accggactct cctgaaggaa caaaccgatc cgatgggcac gactaccgtc
      481 ctttcgctgt tgtcgcccct gtcggggccg acacctcgtc cgagccagtc ccggacgcgc
      541 ggtcactctt cggcaatctc gatcgaccgc tgcagcccgc ccggcgatgc gcagcacatt
      601 cgcggccggg tgtgtcccta tgtcgacgat gtcgcagtcg acgttctgga cccgatatcg
      661 gcagcgatgc ccgccggctg cgtcggaggg cccgccttgc ccgtgcccgg cacctgccgg
      721 cctccgggac gccggcaggt gcgaaaatcc ggcccgcaag ctagtgacgg cgtcgcggaa
      781 ccgccacgcc agggcttgca gaggagagct tgcgacaccg tcgctcgcag ggccgcctcc
      841 gccggcaatc tccatcactt cgccgtacgg aaaccggtct tcgacccact cggccctctg
      901 gtgcccggag cggcccgggg ctgacacatt cccgacctac caccgtcggt ggggcaatgg
      961 tccacgtcga atttcaaccg gatggcatgt ctcggtcgag acagcccgag acggcacggt
     1021 ccggtgccgc tcgacagcgg gagaaggccg atgcccgaga cgaccgcgac gttgctcagc
     1081 ctgcggattg ccgggtggac gcgctcgttt gacgggcagc gacccgtgag cctcggtgcg
     1141 caccgctact gcaatgtgct cctgccttcc ggcgaccggg agatgcccct gcgggcggcg
     1201 gtgttcgaat ggaagagcgg cgcctgggtc ctcttcaacg cgtccaagcg gccgttcgtg
     1261 ttgcgggccg agggccagcc ggccctgtcg ctcgcaccag gcggcagcgt cgcgctgggc
     1321 ggaacgccct tcgtgctcac cgtggccggc gcctccgccg cggccggagt cggggtgtcg
     1381 accctcacgg cgcctgtcgc cgggcggccg atggacggct cggtggcggg cccggagggt
     1441 cgctgcgtct gcggcgcgtc cctgccggct gtcaccgacg gccgaccctg ggacgcggat
     1501 tcggccgaag ccgatctcgc cctcctccgt ccctgggccg gggccgagac gttgaccgcg
     1561 gtcagtgccg acgtcgccct ttttgacagc gcccccggaa cggtgatggg cccggccccg
     1621 gcgtcggcgc cgcgggcatt gcccgggctt gcgccggccc ccggcgcctg gggttatgcg
     1681 ccggcaaccc gcccggccgc gcccggccgg cgatcggggc agctcgtgac cgtactcttc
     1741 ctcgccatcg ccctggtggc ctccgcggcc ggcgcctccg cctggcaggg gatgcaccgc
     1801 ggcgccgtgg cggcgcccca ccccgcccac tgggatcccc gcctctccga catcgtctcg
     1861 ttcgtggaga aggaacgggg ccttaccttc gagcaccccg tcttcgtcga ctacctcgct
     1921 ccggacgtct tccgccagaa gctcctgggt ccttcgggcc cgcccagcgc caaggaccgc
     1981 cggtccatgg agcagacgat cggcttcttc cggacgctgg ggctggtcga ag
//
LOCUS       DATGJT010000347         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1183547, whole genome shotgun sequence.
ACCESSION   DATGJT010000347 DATGJT010000000
VERSION     DATGJT010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1183547"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2130
                     /locus_tag="VKX24_05980"
     CDS             <1..>2130
                     /locus_tag="VKX24_05980"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF020846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HLJ08065.1"
                     /translation="VLVVPSGAASRSVRPLALAPAALPSGTTGTGQVAANQQITFEVV
                     LRPRDPAGIESLLAGLYRPGSPDFEQWLPAGAFAERFGPDPATVAATVSWLRGLGLQA
                     TVGQGFSVDASGPASRVDAGLGVSLQRYRLASGQAAFSARGVPEVPAALAPEVSSIVG
                     LDDLPVAVPESDATAVPATLGTQAVPAATLATCSGANSTAGGAAYTTASIGTAYGVAT
                     MQADGLTGAGKTIAVYELAPSSSGDVSAFDTCFGISDRLAVVAVDGGGTPSTGGTGEA
                     DLDIEQAATQAPGASILSYEGPNTDQGSYDVAKRIVTDDTAKFVSTSWGLCESLNPPS
                     GSAAIASFDVLFQQAAAQGQAVFAAAGDHGSEDCAGDSGSNALAVDYPSSNPWVTGVG
                     GTTRSLNGTETVWNACQGAVDSDCGRNGAGGGGFSSVEARPSWQAGLPAPPGASCGAN
                     GSNCRMVPDISLNAGVPEAFVANGSWALFVGTSLGAPFAAALWADRSAGCATTASGAA
                     GPVLYQLAATGAYAGGINDVTSGNNDFTGSNGGRYAAGPGYDLASGLGSIDAPGVACT
                     ELLSASPAQGPAGTVVTVHGLGLEDAGFAINGAAVAPLSVTPTSAEIPMPSGSGTVSI
                     SDAGPVADGTAGPVTFTYGPPAGAFSRVAGNSAIETAIATSQLDFPAAGSAKAVVLAR
                     SDFFSDALAGGPLAAAVGGPLLITEGA"
BASE COUNT          253 a          831 c          774 g          272 t
ORIGIN      
        1 ttgtcctggt cgtgccctcg ggcgcggcgt cgcgctcggt acgcccgctc gcactggccc
       61 cggccgcgct gcccagcggg acgaccggga ccggccaggt cgcagcgaac cagcagatca
      121 ccttcgaggt cgtcctccgg ccgagggacc cggccggcat cgagtccctg ctcgccggcc
      181 tctaccggcc ggggtcgccc gacttcgagc agtggctccc ggcgggcgcc ttcgcagagc
      241 gcttcgggcc cgacccggcg accgtcgccg ccaccgtcag ctggctccgc ggcctcggac
      301 tgcaggcgac cgtcggccag gggttcagcg tggatgccag cggccccgcg tcgagggtcg
      361 acgccgggtt gggggtgagc ctgcagcgct accggctggc atcgggccag gcggcgttca
      421 gcgcccgggg cgttcccgag gtgccggcgg cgctcgcccc cgaggtctcc tcgatcgtcg
      481 ggctcgacga cctgccggtg gcggttcccg agtcggacgc caccgcggtc cccgccacgc
      541 tcgggaccca ggcggtgccg gccgccaccc ttgccacctg cagcggtgcc aactcgaccg
      601 cggggggcgc cgcctacacc accgcgtcca tcggcaccgc ctacggcgtc gccaccatgc
      661 aggccgacgg cctcaccggg gccgggaaga cgatcgccgt ctacgagctc gcgccgtcct
      721 cgagcgggga cgtctcggcg ttcgacacct gtttcggtat cagcgaccgg ctggcggtcg
      781 tcgccgtcga cgggggcggc acgcccagca ccggtgggac gggggaggcc gacctcgaca
      841 tcgagcaggc ggcgacccag gcgcccggcg cgtcgatcct ctcctacgaa gggcccaaca
      901 ccgaccaggg ctcctacgac gtcgccaaga ggatcgtcac cgacgacacg gcgaagttcg
      961 tctcgaccag ctggggcctg tgcgagagcc tcaacccgcc gtcggggtcg gcggcgatcg
     1021 cgtcgttcga cgtgctcttc cagcaggcgg cggcccaggg gcaggccgtg ttcgccgccg
     1081 ccggagacca cggctccgag gactgcgccg gcgacagcgg ctccaacgcc ctggccgtcg
     1141 actacccctc gtccaacccc tgggtgaccg gtgtcggcgg gacgacgcgg tcactcaacg
     1201 ggaccgagac cgtctggaac gcctgccagg gcgcggtcga cagcgactgc ggccgcaacg
     1261 gcgcgggcgg cggggggttc tcctcggtcg aggcccgccc gtcgtggcag gccgggttgc
     1321 ccgccccgcc gggcgcgtcg tgcggcgcca acggctccaa ctgtcggatg gtcccggaca
     1381 tcagcctgaa cgcaggtgtc cccgaggcct tcgtcgccaa cgggtcctgg gcgctcttcg
     1441 tcggcaccag cctgggcgcg ccgttcgcgg ccgcgctctg ggcggaccgc tcggccggct
     1501 gcgccacgac ggcctccggc gcggccggtc cggtgctgta ccagctggcc gccactgggg
     1561 cctacgccgg ggggatcaac gacgtcacct cgggcaacaa cgacttcacc ggcagcaacg
     1621 gtgggcggta cgcggcgggc cccggctacg acctggcgag cggcctcggc agcatcgacg
     1681 cccccggggt cgcctgcacc gagctgctgt cggcgtcgcc cgcccagggg ccggcgggca
     1741 ccgtggtcac ggtgcacggc ctcgggctcg aggacgcggg cttcgccatc aacggcgccg
     1801 ccgtcgcccc gctgtcggtc acgccgacga gcgccgagat cccgatgccg tcggggtcgg
     1861 gcacggtctc gatcagcgac gccggcccgg tcgccgacgg caccgccggc cccgtcacct
     1921 tcacctacgg cccaccggct ggggccttca gccgcgtcgc gggcaacagc gcgatcgaga
     1981 ccgccatcgc cacctcgcag ctcgacttcc cggccgcggg atcggccaag gcggtggtgc
     2041 tcgcccgctc ggacttcttc tccgacgccc tggccggtgg cccgctcgcg gccgcggtcg
     2101 gcgggccgct gctcatcacc gagggggccg
//
LOCUS       DATGJT010000348         2220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_150425, whole genome shotgun sequence.
ACCESSION   DATGJT010000348 DATGJT010000000
VERSION     DATGJT010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150425"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..853
                     /locus_tag="VKX24_05985"
     CDS             <1..853
                     /locus_tag="VKX24_05985"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08066.1"
                     /translation="LALVGPEVAAEDRHLLGAFTAQLGAALTRRRLQEASAEAARIAR
                     ADELRAALLAAVSHDLRTPLASIKACVTSLLADDVEWPDEAITEFCRTIDEETDRLTA
                     LVANLLDMSRLQAGAVSLHRRPVGVEEIVPAALSSLGDRARGDVVEVGVAETLPRVEA
                     DPALLERVLANLIDNALAWSPPGVPVRVEAGGVPGAVHVRIVDRGPGIPPAERDRVFL
                     PFQRLGDRSSGAGVGLGLAVARGFTVAMGGELTVEDTPGGGTTMVVVLPTAPGPDVSA
                     EPPLVTA"
     gene            867..1544
                     /locus_tag="VKX24_05990"
     CDS             867..1544
                     /locus_tag="VKX24_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014135791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ08067.1"
                     /translation="MGERVLVVDDEPQILRALSINLRARGYDVDLAPTGEEALRQAAD
                     HHPDVVILDLGLPGISGIDVIRGLRGWSSVPIIVLSAREAEADKIAALDAGADDYVTK
                     PFGAGELLARLRAALRRAAPAEEEATVTTDAFTVDLAGKRVMKGGAPVHLTPTEWHLV
                     EVLVRHPGKLVSQRQLLQEVWGPRYESETNYLRLYMAQIRRKLEPVPGQPRHFITEPG
                     MGYRFEP"
     gene            1608..>2220
                     /locus_tag="VKX24_05995"
     CDS             1608..>2220
                     /locus_tag="VKX24_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012879686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08068.1"
                     /translation="MSTATERSTRVLGVDDEENITFLLGSALRHFGFDVTTAATGRQG
                     LEAVRDFEPDLVLLDVMLPDLDGFEVCRRMRQDGERVPVLFLTARDATEDRVRGLTLG
                     GDDYVAKPFSLEEVVARIHAILRRHGRPTKTSQVTFADLEMDDDAHTVRRAGEPIDLS
                     PTEYKLLRFLLSNSGRVLSRAQILDHVWEYDFGGNTSVVDTYIS"
BASE COUNT          297 a          846 c          789 g          288 t
ORIGIN      
        1 cctcgccctg gtcgggccgg aggtggccgc cgaggaccgc cacctcctcg gcgccttcac
       61 ggcccagctc ggggcggcgc tgacccggcg ccgcctccag gaggcgtcgg ccgaggcggc
      121 ccgcatcgcc cgggccgacg agctgcgggc cgcgctgctg gcggcggtgt cgcacgacct
      181 gcggacgccg ctggccagca tcaaggcctg cgtcaccagc ctcctggccg acgacgtcga
      241 gtggcccgac gaggcgatca ccgagttctg ccggacgatc gacgaggaga ccgaccggct
      301 caccgccctc gtggccaacc tgctcgacat gagccgcctg caggccgggg cggtgtcgct
      361 ccaccgccgg ccggtggggg tggaggagat cgtgcccgcc gccctctcga gcctcggcga
      421 ccgggcccgg ggcgacgtcg tcgaggtcgg cgtggccgag acgctgcccc gggtcgaggc
      481 cgaccccgcc ctgctggaac gcgtcctggc caacctcatc gacaacgccc tggcctggtc
      541 gccccccggg gtgccggtgc gggtcgaggc cggcggcgtg cccggcgccg tccacgtccg
      601 catcgtggac cgcggcccgg ggatcccgcc ggccgagcgg gaccgcgtgt tcctgccctt
      661 ccagcgcctc ggcgaccggt cgagcggagc gggcgtcggg ctggggctgg ccgtggcccg
      721 gggcttcacc gtggccatgg gcggcgagct gaccgtggag gacacgcccg gcggcgggac
      781 caccatggtg gtcgtgctgc ccacggcccc cgggcccgac gtctccgccg agccgccgct
      841 ggtgacggcg tgacggtgac cgcctgatgg gggagcgggt cctggtcgtc gacgacgagc
      901 cgcagatcct ccgggcgctg tcgatcaacc tccgggcccg gggctacgac gtcgacctcg
      961 cccccacggg cgaggaggcg ctccgccagg ccgccgacca ccaccccgac gtggtcatcc
     1021 tcgacctcgg gctgcccggc atctccggca tcgacgtcat ccgggggctg cggggctggt
     1081 cgtcggtccc gatcatcgtg ctgtcggccc gggaggcgga ggccgacaag atcgccgccc
     1141 tcgacgccgg ggccgacgac tacgtcacca agcccttcgg ggcgggcgag ctgctggccc
     1201 ggctccgggc cgcgctgcgg cgcgccgcgc cggccgagga ggaggccacg gtgacgaccg
     1261 acgccttcac cgtggacctg gccggcaagc gggtgatgaa gggcggggcg cccgtccacc
     1321 tgaccccgac ggagtggcat ctcgtcgagg tcctcgtccg ccaccccggc aagctcgtca
     1381 gccagcggca gctgctccag gaggtgtggg ggccccggta cgagagcgag acgaactacc
     1441 tccgcctgta catggcccag atccgccgca agctcgagcc cgtccctggc cagccccgcc
     1501 acttcatcac cgagccgggg atgggatacc gcttcgagcc ctgagcccaa tgaatactgg
     1561 cagcggactc acagacactt cacagagtgt gtgccgaaag tggacgcatg agcactgcga
     1621 cagagcggtc gacccgggtc ctcggcgtcg acgacgagga aaacatcacc ttcctgctcg
     1681 gctcggcgct gcggcacttc ggcttcgacg tgaccaccgc cgccaccggc cgccaggggc
     1741 tcgaggccgt gcgggacttc gagccggacc tcgtgctcct cgacgtgatg ctgcccgacc
     1801 tcgacgggtt cgaggtctgc cggcgcatgc gccaggacgg cgagcgggtc ccggtgctgt
     1861 tcctcaccgc ccgcgacgcc accgaggacc gcgtccgggg cctgacgctg ggcggggacg
     1921 actacgtggc caagccgttc tcgctggagg aggtcgtggc ccgcatccac gccatcctcc
     1981 gccgccacgg ccgccccacc aagacctccc aggtcacctt cgccgacctc gagatggacg
     2041 acgacgccca caccgtccgc cgggccggcg agcccatcga cctgtcgccg acggagtaca
     2101 agctgctgcg cttcctgctg tcgaactccg gccgggtcct gtcccgggcc cagatcctcg
     2161 accacgtgtg ggagtacgac ttcggcggca acaccagcgt cgtcgacacc tacatcagct
//
LOCUS       DATGJT010000349         3196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_772004, whole genome shotgun sequence.
ACCESSION   DATGJT010000349 DATGJT010000000
VERSION     DATGJT010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772004"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..1410
                     /gene="pafA"
                     /locus_tag="VKX24_06000"
     CDS             52..1410
                     /gene="pafA"
                     /locus_tag="VKX24_06000"
                     /EC_number="6.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013873556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA];
                     GO_process: GO:0070490 - protein pupylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Pup--protein ligase"
                     /protein_id="HLJ08069.1"
                     /translation="MDRRIFGIENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSS
                     NVFLRNGARLYLDVGSHPEYATPECDSIYDVVVHDKAGERILESLLMSAEQRLREEGI
                     RGEVYLFKNNTDSAGNSYGCHENYLVEREGDFARFTDVLIPFLVSRQIFAGAGKVLQT
                     ARGAMYCVSQRAEHIWEGVSSATTRSRPIINTRDEPHADAERFRRLHVIVGDSNMSEY
                     TNYLKMGTASIVLRMLEEDKGVWRDLTLENPIRAIREISHDITCKRRVRLANGRELSA
                     FEIQSEYLTRAQKFAARKGLGEQETRALAMWEHVMAGLESDPLSLSKEIDWVIKYHLI
                     EQYRERHGIPLTHPKVALVDLAYHDVNTKRSLFYVLERKGLAERVATDADILDATSNP
                     PQSTRAKLRGAFIKRAKERKRDYTVDWVHLKLNDQAQRTVLCKDPFKAEDERVEKLIA
                     CL"
     gene            1421..3007
                     /locus_tag="VKX24_06005"
     CDS             1421..3007
                     /locus_tag="VKX24_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HLJ08070.1"
                     /translation="MHDLTLGAFSDDGPWEVELDRLSWLPGLDHVRAAVRAEVPAMVR
                     PRRLPPGGRLAATARHLGVGVAVWAAGKRRKGGTESVADLSRRLRRAAERLGPAYIKL
                     GQIISSGEGVFPEPLVTEFKKCRDQVPPETYPTVRRVVEEDLGRPLDAVFDRFDREPL
                     AAASIAQVHAARLRTGEEVVVKVQRPQVTRLVKEDLAVMAWIAPRLVGRIPVAALANP
                     PALVELFAETIAEELDFRLEAGNMLDVARSLVELGQKAYVVPRPHPDLVTRRVLVMER
                     LAGFAFDDAAGMRAAGLDTAALVRAGMIGFLEGAMLCGIFHGDLHGGNLFVLPDGRTA
                     LLDFGITGRLDEFRRRAFLRLLVGATVNDVRSQMAALRDLGTLPPDSDLDAVIADLGL
                     DRPAVDPTTLTPDELVAEIQRTVKGLLGYGARMPKELMLFVKNLVFLDGAIANLAPDL
                     DLFAEIAHIAAYFATAHGARITADVGVDPRTQVLDLGGVKASFGVDAGLETLTYRDLQ
                     ARRAIIRERLAKRDRKRRPS"
BASE COUNT          486 a         1123 c         1125 g          462 t
ORIGIN      
        1 aacacgcggg ggatgctgtt gtcatggggc aacgggacgt agccttggcg tgtggatcgg
       61 cgaattttcg ggatcgagaa cgagtacggc gttacgtgca ccttccgcgg gcagcgtcgg
      121 ctctcgcccg acgaggtggc gcgttatctg ttccggcgcg tggtgtcatg gggccgtagc
      181 agcaacgtct tcctcaggaa cggggcccgg ctctacctcg acgtgggcag ccacccggag
      241 tacgccaccc ccgagtgcga ctccatctac gacgtcgtcg tccacgacaa ggcgggcgag
      301 cggatcctcg agagcctact gatgtcggcc gagcagcggc tgcgggagga gggcatccgg
      361 ggcgaggtct acctgttcaa gaacaacacc gactcggccg gcaactccta cggctgccac
      421 gagaactacc tcgtggagcg ggagggcgac ttcgcccgct tcaccgacgt cctcatcccg
      481 ttcctcgtga gccggcagat cttcgccggg gcgggcaagg tgctgcagac ggcccggggc
      541 gccatgtact gcgtgtcgca gcgggccgag cacatctggg agggcgtctc ctcggccacg
      601 acccggtccc ggccgatcat caacacccgc gacgagcctc acgccgacgc cgagcggttc
      661 cgccggctgc acgtcatcgt gggcgactcg aacatgagcg agtacacgaa ctacctcaag
      721 atggggacgg cctcgatcgt gctgcggatg ctcgaggagg acaagggcgt ctggcgcgat
      781 ctcactctgg agaaccccat ccgggcgatt cgcgagatct cccacgacat cacctgcaag
      841 cgccgggtgc gcctggccaa cggccgggag ctctcggcct tcgagatcca gtcggagtac
      901 ctgacccggg cccagaagtt cgccgcccgc aagggcctcg gcgaacagga gaccagggcg
      961 ctggccatgt gggagcacgt catggccggg ctggagagcg acccgttgtc gctgtccaag
     1021 gagatcgact gggtcatcaa gtaccacctg atcgagcagt accgggagcg gcacggcatc
     1081 ccgctgacgc accccaaggt ggcgctggtc gatctcgcct accacgacgt caacaccaaa
     1141 cggtcgctgt tctacgtgct ggagcgcaag gggctggcgg agcgggtggc gaccgacgcc
     1201 gacatcctcg acgccacctc caacccgccg cagagcaccc gggcgaagct ccggggtgcc
     1261 ttcatcaagc gggccaagga gcgcaagcgc gactacacgg tcgactgggt gcacctgaag
     1321 ctcaacgacc aggcgcagcg caccgtcctg tgcaaggacc cgttcaaggc cgaagacgag
     1381 cgggtcgaaa agctcatcgc ctgcctctag cttcgtagcg gtgcatgatc tgacgctggg
     1441 ggcgttctcg gacgacgggc cgtgggaggt cgagctcgac cggctcagct ggctgccggg
     1501 gctcgaccac gtgcgggcgg cggttcgggc cgaggtcccg gcgatggtgc ggccgcggag
     1561 gctcccgccc ggggggcggc tggcggcgac cgcccgccac ctcggggtcg gcgtggcggt
     1621 gtgggccgcc ggcaagcgcc gcaagggcgg gacggagtcc gtggccgacc tgtcgcgccg
     1681 gctgcggcgg gcggccgagc ggctcggccc ggcctacatc aagctcgggc agatcatctc
     1741 ctcgggcgag ggcgtgttcc ccgagccgct ggtgacggag ttcaagaaat gccgggacca
     1801 ggtgccgccg gagacgtatc ccaccgtccg gcgggtggtg gaggaggacc tcggccggcc
     1861 cctcgacgcc gtcttcgacc ggttcgaccg ggagccgctg gcggcggcgt cgatcgccca
     1921 ggtccatgcc gcccggctgc ggacgggcga ggaggtcgtc gtcaaggtcc agcggccgca
     1981 ggtcacccgg ctggtcaagg aggacctggc cgtcatggcc tggatcgccc cccggctcgt
     2041 gggccgcatc ccggtggccg ccctggccaa cccgccggcg ctggtggagc tcttcgccga
     2101 gaccatcgcc gaggaactcg acttccgcct cgaggccggg aacatgctcg acgtcgcccg
     2161 gtcgctggtc gagctcgggc agaaggccta cgtcgtaccc cggccccatc ccgacctcgt
     2221 cacccgccgg gtcctggtca tggagcggct cgccggcttc gccttcgacg acgcggccgg
     2281 catgcgggcg gcggggctcg acaccgccgc cctcgtgcgg gcggggatga tcgggttcct
     2341 ggagggcgcc atgctgtgcg ggatcttcca cggcgacctc cacggcggga acctcttcgt
     2401 gctccccgac gggcggaccg ccctgctcga cttcggcatc accggccggc tcgacgagtt
     2461 ccgtcgccgg gcctttctcc ggctcctcgt cggcgccacc gtcaacgacg tccggagcca
     2521 gatggccgcc ctgcgcgacc tcggcacgct cccgcccgac agcgatctcg acgccgtgat
     2581 cgccgacctc ggcctcgacc ggcccgcggt cgacccgacg acgctgacac cagacgaact
     2641 ggtggcggag atccagcgga cggtgaaggg cctcctcggc tacggagccc ggatgccgaa
     2701 ggagctcatg ctgttcgtga agaacctggt cttcctcgac ggcgccatcg ccaacctggc
     2761 gcccgacctc gacctcttcg ccgagatcgc ccacatcgcc gcctacttcg ccaccgccca
     2821 cggcgcccgc atcacggccg acgtcggcgt cgacccccgc acccaggtcc tcgacctggg
     2881 cggagtgaaa gcatccttcg gcgtcgacgc cgggctggaa accctgacct accgcgacct
     2941 ccaggcccgc cgggccatca tccgggagcg cctggcaaag cgggatcgga agcgccgccc
     3001 gtcgtaaggt cgctgccgtg ccgtcgtttc ggaccggggt cgtcgccatc ttgctcgagg
     3061 agcggcgcgg gctgcagcgg gtcgaggtcg acttcggcga ggggccggag cgggcctatg
     3121 ccctgacgga ggtcaccggg cccgtcgccg tcggcgaccg cgtggtcgtg aacacgacgg
     3181 cggtggaact gggcct
//
LOCUS       DATGJT010000350         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1496916, whole genome shotgun sequence.
ACCESSION   DATGJT010000350 DATGJT010000000
VERSION     DATGJT010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496916"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VKX24_06010"
     CDS             <1..1008
                     /locus_tag="VKX24_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08071.1"
                     /translation="IVLTNSGSAPLKVSNLDFSDPKEFLLESDCLGAAIAAGAKCSVE
                     LFFIPSGAGPQAATLTITDDAGSGSQTVALSGSGTEGYYEAGPAGAVTPEGDAPAFGD
                     VSGRSLNAPIVSIATTPDGDGYWLLGRDGGIFSFGDAAFHGSTGGIRLNEPVLGMAPT
                     PDGGGYWLVASDGGVFAFGDAQFFGSAGAMRLNKPIVGMAVTPDGGGYWLIAADGGIF
                     SFGDAAFYGSTGALHLRKPIVGAAATPSGNGYWLFAADGGIFGFGDAQFHGSSAAPVS
                     APIVGMAVTPDGGGYWEADSTGAVFAFGDAADLPSPPGIGPIIGLAPTAPPLPPFLLA
                     A"
     gene            complement(1028..1663)
                     /gene="mug"
                     /locus_tag="VKX24_06015"
     CDS             complement(1028..1663)
                     /gene="mug"
                     /locus_tag="VKX24_06015"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020669251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000700 - mismatch base pair DNA
                     N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HLJ08072.1"
                     /translation="MSSGPESPRPVPDADRGRRPRPTRVEIENARGGTVPDVVAPGLT
                     VVFCGINPSLYSAAVGHHFARPGNRFWPVLHRSGFTPRQLAAEEDARLIEFGLGITNL
                     VPRATARADELSDQELRDGAVALGRRLRSVPPRWVAIVGVSAYRIAFGARKAGIGPQA
                     GSLGDAAVWVLPNPSGLNAHYSLAALVAAFRDFRQYVEAKAGGHKSHQDER"
     gene            1903..>2139
                     /locus_tag="VKX24_06020"
     CDS             1903..>2139
                     /locus_tag="VKX24_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012688608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ08073.1"
                     /translation="MPEDHHGENGFGAAARAGEWDARYREREGARWSGRPNGRLLAEI
                     SGLAPGRALDVGCGEGADAIWLAGRGWTVIAIDIS"
BASE COUNT          289 a          763 c          744 g          343 t
ORIGIN      
        1 atcgtcctca cgaactcggg atcggcgccg ctgaaggtgt cgaacctgga cttcagtgat
       61 cccaaggagt tcctgctcga gtccgattgc ctcggagccg caattgccgc cggagcgaag
      121 tgctctgtcg agcttttctt cattccctcc ggcgccggcc cccaggccgc gacacttacc
      181 attaccgatg acgcggggag tggcagtcag accgtggcgc tgtcgggctc cgggaccgag
      241 ggctactacg aagcgggtcc ggcgggggcg gtcacccccg aaggtgatgc cccggcgttc
      301 ggcgacgtat ccggccgctc gctcaacgca ccgatcgttt ccatcgccac cacgcccgac
      361 ggcgacggct actggctgct gggccgggat ggcggcatct tctccttcgg cgacgccgcc
      421 ttccacgggt cgacgggcgg catccgcctc aatgagccgg tgctcgggat ggcgccgacc
      481 cccgacgggg gcggctactg gctcgttgcc tccgacggcg gcgtctttgc cttcggcgac
      541 gcccaatttt ttggatctgc cggggcgatg cgcctgaaca agcccatcgt cggcatggca
      601 gtcacccctg acggcggcgg ctattggttg atcgcggccg acggcggcat cttctccttc
      661 ggcgatgccg ccttctacgg ctccaccggc gcgctccacc ttcggaagcc catcgtcggc
      721 gcggccgcca caccctcggg aaacggctac tggctgttcg ccgccgacgg gggcatcttt
      781 ggcttcggcg acgcccagtt tcacgggtcg agtgccgcgc ctgtctcggc ccccatagtc
      841 gggatggccg tcacgcccga cgggggaggc tactgggaag ccgattcgac cggggcagtc
      901 ttcgccttcg gcgatgccgc cgacctgccc agccctccgg ggatcggccc aatcatcggc
      961 ctggcgccaa ccgccccgcc gctcccgccc ttcctgctgg ctgcctaacg ctttgccggc
     1021 ggtgggttca ccgttcgtcc tggtgcgact tgtgcccacc cgccttggcc tccacgtact
     1081 ggcggaagtc ccggaacgca gccacgagcg ccgccaggct gtagtgagcg ttcagcccgc
     1141 tcgggttcgg cagcacccag accgccgcat cacccagact gccggcctgc gggccaatcc
     1201 ccgccttgcg ggcgccgaag gcgatccggt aggcgctgac gccgacgatc gccacccacc
     1261 gcggtggcac tgaccggagg cgccggccca gcgcgacggc gccatcccgg agctcctggt
     1321 cgctcagttc gtcggctcgg gcggtggctc tcggcaccag attggttatc ccgagcccga
     1381 actcgatcag ccgagcatcc tcctcggccg ccagctggcg gggggtgaag cccgaccgat
     1441 gcaagacggg ccagaaccgg ttccccggtc gggcgaagtg gtggccgacg gcggccgagt
     1501 acaggctggg gttgatgccg cagaagacca cggtgaggcc gggggccacg acgtccggga
     1561 cggtgccgcc gcgagcattc tcgatctcca cccgtgtcgg tcgggggcga cggccacggt
     1621 cagcgtccgg cactggcctc ggagactccg gcccagagct cattgatcag ggcgcttggc
     1681 gtcggcgacg tcgccgcctg tggagtgaat gaccattccg gtgagatccc gggcaggctg
     1741 gccgcgccgt gtcgtaccgg tgccccctgc ccatccgatg ccgacgtgca tccgaccgtc
     1801 actgtacccg cagcaattgc gagcacggta cggtcggccc agtgctcccg accggcgtgg
     1861 cgtggcggcc gaggccgcgc cggaccggct accctgcggg tcatgcctga ggatcaccac
     1921 ggcgagaacg ggttcggtgc ggcggcacgg gcgggcgagt gggacgccag gtaccgcgag
     1981 cgggagggtg cgcggtggag cggccgcccg aacggccggc tcctggccga gatctcaggc
     2041 ctcgcgccgg ggcgggcgct cgatgtcggt tgcggggaag gcgccgacgc catctggctc
     2101 gctggccgcg gttggacggt aattgcgatc gacatctcc
//
LOCUS       DATGJT010000351         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_876862, whole genome shotgun sequence.
ACCESSION   DATGJT010000351 DATGJT010000000
VERSION     DATGJT010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_876862"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..821
                     /locus_tag="VKX24_06025"
     CDS             <1..821
                     /locus_tag="VKX24_06025"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLJ08074.1"
                     /translation="SPVPGIGGTIEPCSGMSSLLGYVDGPPLNSGHMYPDPVAGLYGF
                     GAVITALAHRRRTGEGQHVDLSMQEACVTFLGDEWMRYQETGLSPARRGNRHPAYAPH
                     GIFPCRGDDQWVALAAPDDAAWRSVVWVLGGDELGDERFATAQGRQANEMDLEAAIGR
                     RTATHDKRELSDALVSEGVIAAPVLDVGEVLADPDLRDRGAVRHVAHSLAGDALQAGL
                     PLRMAKTQLPPWGSSPLHGEHSLEVLQQELGLDEGTYATLVAAGVTGSGPVKES"
     gene            821..1672
                     /locus_tag="VKX24_06030"
     CDS             821..1672
                     /locus_tag="VKX24_06030"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLJ08075.1"
                     /translation="MDYHNIRTEDDGHVRRIITSRPEYRNAQSRRLLEELDDAFAAAA
                     EDVDIRVVVLLGDGDHFSGGHDLGSPAELADREQRPRPEGVRGKFQHSRESFVNKTLR
                     WRDLPKPTIAGVQGYCIFGGWMVASAMDIIYAADDAMFLGANFQYFSVPWDISPRRAK
                     ELLYESRFIDAAEAEELGLVNKVVPRRLLDDAVMDYARRVADNDPFQLRMTKMAVNQM
                     QDVQGFQAHITAAHLMHLMSSAGETDPDYALRPSDGRRRPMVQKAFEHYELRKAEQAT
                     PPDEPPS"
     gene            1850..>2112
                     /locus_tag="VKX24_06035"
     CDS             1850..>2112
                     /locus_tag="VKX24_06035"
                     /inference="COORDINATES: protein motif:HMM:NF017959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HLJ08076.1"
                     /translation="MVKAIPWWAVAGAVACPILLIGGFSVAAELQPPFYDPVRNTISE
                     LASQGATDSWVMTSALAGVGLCYLVVAIGLWPARSAGRVVLACG"
BASE COUNT          329 a          725 c          722 g          336 t
ORIGIN      
        1 ggtctccggt tcccggcatc ggaggaacca tcgagccgtg ttcgggcatg tcctcgctgc
       61 tgggatatgt cgacggcccg cccctcaact cgggccacat gtaccctgac ccggtcgccg
      121 ggctctacgg gttcggggcc gtgatcactg ccctggcgca ccgtcgccgg acgggggagg
      181 ggcagcacgt ggacctgtcg atgcaggaag cctgtgtgac cttcctcggc gacgagtgga
      241 tgcggtacca ggagaccgga ctctcgccgg cccggcgggg taaccgccac cccgcgtacg
      301 cgccccacgg catcttcccc tgtcgtggcg acgaccagtg ggtggccctg gccgcgccgg
      361 acgacgccgc gtggaggtcg gtcgtctggg tgctgggggg cgacgagctg ggcgacgagc
      421 gcttcgccac agcacaggga cgccaggcga acgagatgga cctcgaagcg gccatcggcc
      481 gtcgaaccgc cacgcacgac aagcgcgagc tgtcggacgc cctcgtgtcg gagggcgtca
      541 tcgcggctcc ggtgctcgat gtcggcgagg tgctggccga ccccgatctc agggatcgag
      601 gcgcggtccg ccatgtcgcc cactcgctcg ccggggacgc cctgcaggcg ggcctgccgc
      661 tgcggatggc gaagacgcag ttgccgccgt ggggctcctc gccgctccac ggcgagcact
      721 cgctcgaggt cctgcagcag gagctcggtc tcgacgaggg gacctacgcg accctggttg
      781 cagctggggt caccggctct ggcccggtga aggagagctg atggactatc acaacatccg
      841 caccgaggac gacggccacg ttcggcgcat catcacgagc cggcccgagt accgcaatgc
      901 ccagagccgc cgactgctcg aagagctgga cgatgccttc gccgcggccg ccgaggacgt
      961 cgacatccgg gtcgtcgtgc tcctcggtga cggcgaccac ttctcgggtg gtcatgacct
     1021 cgggtcgccg gccgagttgg ccgaccgcga gcaacgtcct cgacccgagg gagtgcgtgg
     1081 caagttccag cactcacgcg agagtttcgt caacaagacc ttgcgctggc gcgacctacc
     1141 gaagccgacg atcgccgggg tccaggggta ctgcatcttc ggcggatgga tggtcgcctc
     1201 ggccatggac atcatctacg ccgcagacga cgcgatgttc ctcggcgcca acttccaata
     1261 cttctccgtc ccctgggaca tctcgcccag gcgagccaag gagctcttgt acgagagccg
     1321 gttcatcgat gccgccgagg ccgaggagct gggtctcgtg aacaaggtcg ttccgcgaag
     1381 acttctcgac gacgcggtca tggactacgc gcgccgcgtc gccgacaacg accccttcca
     1441 gcttcgaatg acgaagatgg ccgtcaatca gatgcaggac gtccagggct ttcaggccca
     1501 catcacggcc gcccacctga tgcacctgat gtcgtcagcc ggggagaccg accccgacta
     1561 cgccttgcgc ccttccgacg gccggcgccg gcccatggtc cagaaggcgt tcgagcacta
     1621 cgagttgcgc aaggccgagc aagctacccc tccggacgaa ccgccatcct gaacgagcgg
     1681 ctcctggtct gcgccggccg cctgtgatgg ctcttctgcg ctcggcgggt cgacaccggg
     1741 atccgagatc ggagcgctcg cacgctcgat tgcctccgac gtgaaccaac ggaagttcgc
     1801 gatcagcgcc ttcggtaggg gccggctgag tccggccacg taggatccga tggtgaaggc
     1861 aatcccatgg tgggcggtgg cgggcgcggt ggcgtgcccg atcctgctca tcggcggctt
     1921 ctcggtggcc gcggagttgc agccgccctt ctacgacccg gtccgcaaca ccatcagcga
     1981 actggccagc cagggggcga ccgactcctg ggtgatgacc tccgcgctcg ctggcgtggg
     2041 tctgtgctat ctggtcgtcg cgatcggcct gtggccagcg cgatcggccg gacgcgtcgt
     2101 gctcgcctgc gg
//
LOCUS       DATGJT010000352         3035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_979233, whole genome shotgun sequence.
ACCESSION   DATGJT010000352 DATGJT010000000
VERSION     DATGJT010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979233"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1791)
                     /locus_tag="VKX24_06040"
     CDS             complement(<1..1791)
                     /locus_tag="VKX24_06040"
                     /inference="COORDINATES: protein motif:HMM:NF009381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLJ08077.1"
                     /translation="MKAYSPEAIRNVGLFGHQGTGKTSLAEALVFLSGATTRIGRIED
                     GNTVCDYEPEEIKKALSVSLALAPIEWDNTKINLIDVPGYADFVGEAQAALRVVDLAV
                     FVLSAVEGVQVQHQILWGMAEKLNLPRLVFINKLDRERASFSRTLADLTEKLGSGFAP
                     VDLPLGEEHELHGIVDVLEEKAYHYDASGKSSPAELSGAALEEADRLHMQIVESVAES
                     DDELLERYLEGGEITRPEIAEGLSKGLLAGTVFPVLAGSTTHLIGVDRLADFIVEEGP
                     SPAARGPAHAADGTSEREPSPAAPLSAFVFKTVSDPYVGRISLFRVCSGTLHPDSTVF
                     NATNSSDERIGQVFALRGKTQVPLTEVPAGDIAAVAKLAHTTSGDTLTDKASPIVYPA
                     LAAPERALAKAIAPKTKGDEDKLMTGLARLQEEDPALSVERNAETHQTLLWGTGEAHL
                     DVTLDRLHRKFGVDVAELPLRIPYRETIAKQAQALGRHVKQTGGHGQYAIAHIVVEPG
                     GRGSGFEFVDKIVGGAIPNQFIPSVQKGIEKALTEGALAGYPVVDVKVTLDDGKFHPV
                     DSSDLAFQLAGAQGFKDAALAAGVVLLEPIM"
     gene            1825..2433
                     /locus_tag="VKX24_06045"
     CDS             1825..2433
                     /locus_tag="VKX24_06045"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HLJ08078.1"
                     /translation="MLASRLRAPINRIAQPLGRAVARTGVSANVVTLLGVALVAAGTV
                     IFCSGRLVLGAAAVSVGGILDLVDGAVAKVTHTASTFGAFLDSTTDRLSDGILFSGVA
                     WYLVEHPNAGIRLELSASAVLILALAVLTLGFLTSYIKGRAEALGFECNLGIAERGER
                     VFVMAVSMYFNIMVPALVLLFVASSVTVVQRFVHVYLQAKRS"
     gene            2574..>3035
                     /locus_tag="VKX24_06050"
     CDS             2574..>3035
                     /locus_tag="VKX24_06050"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Acylates the intermediate (KDO)2-lipid IVA to form
                     (KDO)2-(lauroyl)-lipid IVA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylinositol mannoside acyltransferase"
                     /protein_id="HLJ08079.1"
                     /translation="MAERLPPRLTDAGADLGGELAYRASYRKRDLVRRNLARVVGDGP
                     GLDGTVQKAYRSYARYWLETFRLGRYTREDLLKMVYATNEELVDAALASGTGLIVVLP
                     HFGFYDLLGAWAGAKGYPLTTVAEVLKPRALFEWFADIRERTGMTILPARPG"
BASE COUNT          402 a         1048 c         1083 g          502 t
ORIGIN      
        1 catgatcggt tccagcagca cgacgccggc agccagcgcg gcgtccttga agccctgggc
       61 gccggccagc tggaaggcga ggtccgagga gtcgaccggg tggaacttgc cgtcgtcgag
      121 ggtgaccttg acgtcgacga ccgggtagcc ggccagcgcc ccctcggtca gcgccttctc
      181 gatgcccttc tgcaccgacg ggatgaactg gttcgggatc gccccgccga cgatcttgtc
      241 gacgaactcg aagccgctgc cgcggccgcc gggctcgacg acgatgtggg cgatggcgta
      301 ctggccgtgc ccgccggtct gcttgacgtg gcggccgagg gcctgggcct gcttggcgat
      361 cgtctcccgg tacgggatgc gcagcggcag ctcggcgacg tcgacgccga acttgcgatg
      421 cagccggtcg agggtgacgt cgaggtgggc ctcgccggtg ccccagagca gggtctggtg
      481 ggtctcggcg ttgcgctcga ccgagagcgc cggatcctcc tcctgcaggc gggctaggcc
      541 cgtcatcagc ttgtcctcgt cccccttggt cttgggggcg atcgccttgg ccagcgcccg
      601 ctccggggcg gcgagggccg ggtagacgat cgggctggcc ttgtcggtca gcgtgtcgcc
      661 gctggtggtg tgggcgagct tggcgaccgc cgcgatgtca ccggccggca cctcggtcag
      721 cgggacctgg gtcttgcccc gcagggcgaa cacctggccg atccgctcgt cgctggagtt
      781 ggtggcgttg aagacggtgc tgtccgggtg cagggtcccc gagcagaccc ggaacagcga
      841 gatgcggccg acgtacgggt cggacacggt cttgaacacg aacgccgaca gcggggcagc
      901 cgggctcggc tcccgctcgg aggtgccgtc ggcggcgtgg gcgggacccc gtgccgccgg
      961 cgacgggcct tcctcgacga tgaagtcagc cagccggtcg acgccgatca ggtgggtcgt
     1021 cgaaccggcc agcaccggga agaccgtccc ggcgagcagg cccttgctca acccctcggc
     1081 gatctccggg cgggtgatct cgcccccctc caggtagcgc tcgagcagct cgtcgtcgga
     1141 ctcggcgacc gactcgacga tctgcatgtg cagcctgtcg gcctcctcga gtgcggcgcc
     1201 ggacagctcc gctggcgacg acttgcccga ggcgtcgtag tggtaggcct tctcctcgag
     1261 cacgtcgacg atgccgtgga gctcgtgctc ctcgcccagg ggcaggtcga ccggggcaaa
     1321 gccgctcccc agcttctcgg tcaggtcggc cagcgtccgg ctgaacgagg cccgctcccg
     1381 atccagcttg ttgatgaaca cgaggcgggg caggttgagc ttctccgcca tgccccacag
     1441 gatctggtgc tggacctgga cgccctcgac cgcggaaagc acgaacaccg ccaggtcgac
     1501 cacccggagc gccgcctggg cctcaccgac gaagtcggcg tacccgggca cgtcgatcag
     1561 gttgatcttg gtgttgtccc attcgatcgg agcgagcgcc agcgacaccg acagagcctt
     1621 cttgatctcc tcgggctcgt agtcgcagac ggtgttgccg tcttcgatgc ggccgatgcg
     1681 cgtggtggca ccggagagga agaccagggc ctcggcaagc gaggtcttcc ccgtcccctg
     1741 gtgtccgaac aagccgacgt tgcggatcgc ttccggcgaa tacgccttca tggctccggc
     1801 gattatctat attcttggcc cggggtgcta gccagccgcc tgcgggcacc gatcaatcgt
     1861 attgcccagc cgctcggccg ggcagtcgcc cgtaccggcg tctcggccaa cgtggtgacc
     1921 cttctgggcg tggccctggt ggccgccggg accgtcatct tctgcagcgg ccggctggtg
     1981 ctcggggcgg cggcggtcag cgtcggcggg atcctcgacc tggtcgacgg tgcggtggcc
     2041 aaggtcaccc acaccgcatc gacgttcggg gcgttcctcg actcgaccac cgaccggctg
     2101 tccgacggga tcctgttctc cggcgtggcc tggtacctgg tcgagcaccc caacgccggc
     2161 atccggctgg agctctcggc gtcggcggtc ctgatcctcg ccctggccgt gctgacgctc
     2221 ggcttcctga cctcctacat caaggggcgg gccgaggcgc tcgggttcga gtgcaacctc
     2281 ggcatcgccg agcgcggcga gcgggtgttc gtcatggccg tctcgatgta cttcaacatc
     2341 atggtgcccg ccctggtgct gctgttcgtc gcctcgtcgg tgactgtcgt ccagcgcttc
     2401 gtgcacgtgt acttgcaggc gaagcggtca tagacggcac ccccgacccg ggctccggct
     2461 ccggcggcgc agcccgcggc gacccgtccc gcggcgtccc gtcccgcggc gacccgttcg
     2521 agaacgggct caaactcggc ctgcgctact acgggttcaa agccggcgcc tggctggccg
     2581 agcggctgcc gccccggctg accgacgccg gggccgacct cggcggggag ctggcctacc
     2641 gggcctcgta tcgcaagcgg gacctggtgc gccgcaacct ggcccgggtg gtcggcgacg
     2701 ggccgggcct cgacgggacc gtgcagaagg cctaccgctc ctacgcccgc tactggctgg
     2761 agaccttccg gctgggccgc tacacccggg aagacctgct gaagatggtc tacgccacga
     2821 atgaggagct ggtcgacgcg gcgctggcgt cgggcaccgg cctgatcgtg gtgctgcccc
     2881 acttcggctt ctacgacctg ctcggggcgt gggccggtgc gaaggggtac ccgttgacga
     2941 cggtcgccga ggtcctgaag ccccgggcgc tgttcgaatg gttcgccgac atccgggagc
     3001 ggaccgggat gacgatcctc ccggccaggc cgggg
//
LOCUS       DATGJT010000353         2354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_565895, whole genome shotgun sequence.
ACCESSION   DATGJT010000353 DATGJT010000000
VERSION     DATGJT010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_565895"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VKX24_06055"
     CDS             complement(<1..772)
                     /locus_tag="VKX24_06055"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ08080.1"
                     /translation="MGLQRVLVVDDDPDYRLLVRLALAAGSGFEVVAEAGDGPAAEAA
                     AAETRPDLVLLDCTLPGGDAFDVLPRLRAAAPEARIVLVSGHDPADLRLASRSAGAVG
                     YLTKGTPARRLAGELHALVGLVDAVEQMLAEASRRFDHDAQTPRAARRFVSEALTAWG
                     DDEGDLTDTVTLLVSELVTNAVVHAGSDVEVIVRLTSTAARVEVTDASTNGVAPRDAT
                     SEEDSGRGLALVGNLARRWGVRAAPGGGKTVWFEVERPP"
     gene            complement(784..1998)
                     /locus_tag="VKX24_06060"
     CDS             complement(784..1998)
                     /locus_tag="VKX24_06060"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08081.1"
                     /translation="MTVALPAPGLPRVLLVDDRPDNLLALRAVLEPLALELVEAGSGE
                     EALRHLLAGEFALIILDVQMPVLDGFETARLIRGRERTRYVPIIFLTAISGQPEHYRQ
                     GYQSGAVDYVYKPFEPEILRAKVSVFVELWTRGATIEAQRAELAARLTELDEAHAGLA
                     AQAVELERSNAALERFAEVVGVELREPLHTVAGLLDLLDDRHATALSDEGRTLLARAL
                     AGTDRASGIVGSLLDYARTQTVELHRDRIPLVEVLAEAEAETGPQLAEAKAEVVAGAL
                     GDGRLPMVWGDRNQLVQLLAELLDNAVRFRGPASPVVTVSAEPAGGGVRVTVADNGPG
                     VEETELPRLFTVFARPAAAAPATPGTSGRGRGAGLGLALCRRIVERHGGMIWAERGAE
                     GGLVVRFELPEG"
     gene            complement(1995..>2354)
                     /locus_tag="VKX24_06065"
     CDS             complement(1995..>2354)
                     /locus_tag="VKX24_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017286319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ08082.1"
                     /translation="ILIVDDDVRNVYALTSALEDRGIEVVTADNGRRGVEVLRSNPGI
                     DLVLMDIMMPDMDGYETTRAIRKIEGFRELPIIALTAKAMRGDREKSLAAGASDYITK
                     PVEINQLLSLMRLWLDR"
BASE COUNT          309 a          893 c          853 g          299 t
ORIGIN      
        1 tcggtggccg ttcgacttcg aaccacacgg tcttcccgcc gcccggcgcc gcccgcacgc
       61 cccaccgccg ggccaggttc ccgacgaggg cgaggccgcg gccggagtcc tcctcggatg
      121 tggcgtcgcg gggcgccacg ccgttggtcg aggcgtcggt cacctcgacc cgggcggcgg
      181 tggaggtgag gcggacaatc acctcgacgt cggagccggc gtggaccacg gcgttggtca
      241 cgagctccga caccagcaag gtgaccgtgt cggtgaggtc gccctcgtcg tcgccccagg
      301 cggtcagggc ctcgctcacg aaccggcggg cggcccgggg cgtctgggcg tcgtggtcga
      361 agcgccggct ggcctccgcc agcatctgct ccacggcgtc gaccagcccg acgagggcgt
      421 ggagttcgcc ggccaggcgc cgggccgggg tgcccttcgt caggtagccg accgcccccg
      481 ccgaccggct ggccagccgc aggtcggccg ggtcgtggcc cgacacgagg acgatgcggg
      541 cctccggcgc cgcggcccgc aggcgcggca gcacgtcgaa ggcgtccccg cccggcagcg
      601 tgcagtccag cagcacgagg tcgggccggg tctccgccgc ggccgcctcc gccgcggggc
      661 cgtcccccgc ctcggccacg acctcgaacc cgctccccgc cgccagcgcc aggcggacga
      721 ggagccggta gtcggggtcg tcgtcgacga cgagcacgcg ctggagaccc atgacgcctc
      781 ggcctatccc tccggcagct cgaaccggac cacgaggccg ccctcggccc cgcgctccgc
      841 ccagatcatg ccgccgtggc gctcgacgat gcgacggcac agggccagcc cgagccccgc
      901 cccccggccc cggcccgacg tcccgggcgt cgccggggcg gccgccgccg gacgggcgaa
      961 gacggtgaac agccggggca gctccgtctc ctccacaccc gggccgttgt cggccaccgt
     1021 gacccggacc cctccgccgg ccggctcggc cgagaccgtc accacgggcg acgccggccc
     1081 ccggaagcgg acggcgttgt cgagaagctc ggccagcagc tggaccagct ggttgcggtc
     1141 gccccagacc atcgggagcc gaccgtcccc cagggcaccg gccaccacct cggccttggc
     1201 ctcggccagc tgcgggccgg tctcggcctc ggcctcggcc agcacctcga cgagcgggat
     1261 ccggtcgcgg tggagctcca ccgtctgcgt ccgggcgtag tcgaggagcg acccgacgat
     1321 gcccgaggcc cggtcggtgc cggccagggc ccgggccagc agtgtgcggc cctcgtcgga
     1381 cagcgccgta gcgtgacggt cgtcgagcag gtcgagcagc cccgccacgg tgtggagcgg
     1441 ctcccgcagc tcgacgccga cgacctcggc gaagcgctcg agggcggcgt tgctccgctc
     1501 cagctccacg gcctgggcgg ccagcccggc atgggcctcg tcgagttcgg tcaggcgggc
     1561 ggcgagctcg gcccgctggg cctcgatcgt cgccccccgg gtccagagct cgacgaacac
     1621 cgacaccttg gcccgcagga tctccggctc gaacggtttg tagacgtagt ccacggcgcc
     1681 gctctggtac ccctgccggt agtgctccgg ctgtccggag atggcggtga ggaagatgat
     1741 cggcacgtag cgggtccgtt cccgtccccg gatcagccgg gcggtctcga acccgtcgag
     1801 gaccggcatc tgcacgtcga ggatgatcag ggcgaactcg ccggccagca ggtggcgcag
     1861 cgcctcctcg cccgagccgg cctcgacgag ctccagggcc agcggctcga gcaccgcccg
     1921 cagcgccagc aggttgtcgg ggcggtcgtc gacaagcagg acccggggca gacccggggc
     1981 cggaagagcg acggtcatcg atcgagccac agccgcatga gcgacagcaa ctggttgatc
     2041 tcgacgggct tggtgatgta gtccgaggcc ccggcggcca ggctcttctc ccggtcgccc
     2101 cgcatggcct tggccgtgag ggcgatgatc ggcagctccc ggaagccctc gatcttgcgg
     2161 atggccctgg tcgtctcgta gccgtccatg tcgggcatca tgatgtccat cagcacaagg
     2221 tcgatgccgg gattggaccg cagcacctcg acgccccgcc gcccgttgtc ggccgtgacg
     2281 acctcgatcc cccggtcctc gagggcgctg gtgagggcgt agacgttgcg gacgtcgtcg
     2341 tcgacgatga ggat
//
LOCUS       DATGJT010000354         2138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1184929, whole genome shotgun sequence.
ACCESSION   DATGJT010000354 DATGJT010000000
VERSION     DATGJT010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1184929"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..>2138)
                     /locus_tag="VKX24_06070"
     CDS             complement(40..>2138)
                     /locus_tag="VKX24_06070"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0032549 - ribonucleoside binding [Evidence
                     IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HLJ08083.1"
                     /translation="VVYLAADEEEEHVIAQANAPVDDKGNFTEDRVLVRRGPQGTGVR
                     VGAATTTYGTTSEIDFVPPSEVDLMDVSPKQIVSVSTALIPFVEHDDANRALMGANMQ
                     KQAVPLVVPEAPYIGTGVEARAARDAGDVVLAEGEGTVTEVSGDQIVVEYRPGQKDRV
                     GRNLGRKIYRLAKFRRSNQNTSINQKPLVEEGQKVADGDLLADGPSTHNGELALGKNL
                     LVAFMPWEGYNYEDAIILSERLVRDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNLS
                     EEILADLDERGIIRIGAEVGPGDVLVGKVTPKGETEQTPEERLLRAIFGEKAREVRDT
                     SLKVPHGEEGKVIDVRVFSRDSSHELPPGVNELVRVYVAQKRKISEGDKLAGRHGNKG
                     VISKILPIEDMPYLSDGTPVDIILNPLGVPSRMNVGQVLESHLGYAARFGWSSETPEP
                     DAGTSGREDGVDRKTRPRTMPANWVATPVFDGAHWDEVEDAGHHPTIKGLFSELRPDS
                     ARGDVQIGTDGKATLYNGRTGEPYDNPVSVGYVYILKLAHLVDDKIHARSTGPYSMIT
                     QQPLGGKAQFGGQRFGEMEVWALEAFGAAYALQELLTIKSDDVLGRVKVYEAIVKGEN
                     IPEPGIPESFKVLIKEMQSLCLDVDVLSVTGEEIEMHELDEDVFRTAEELGIDISRPE
                     RGSDEEDARRAGERGF"
BASE COUNT          272 a          733 c          743 g          390 t
ORIGIN      
        1 cgattcggag ctgttcgaaa ttgtttacgt cgagcactgt cagaaacccc tctcgccggc
       61 tcggcgggca tcctcttcgt ccgatcccct ctcgggccgg ctgatgtcga taccgagctc
      121 ctcggccgtg cggaacacgt cctcgtcgag ctcgtgcatc tcgatctcct caccggtgac
      181 cgagagcacg tcgacgtcga ggcacaggga ctgcatttcc ttgatgagca ccttgaagct
      241 ctcggggatc cccggctcgg ggatgttctc gcccttcacg atcgcctcgt agaccttgac
      301 ccggccgagg acgtcgtcgg acttgatggt gagcagctcc tggagggcgt aggcggcacc
      361 gaaggcctcg agcgcccaca cctccatctc cccgaagcgc tggccaccga actgggcctt
      421 cccacccagg ggctgctggg tgatcatcga gtacgggccg gtcgagcggg cgtggatctt
      481 gtcgtccacc aggtgggcca gcttcaggat gtagacgtag ccgaccgaga ccgggttgtc
      541 gtagggctcg ccggtgcgcc cgttgtagag cgtcgctttg ccgtcggtcc cgatctggac
      601 gtcaccccgg gccgagtccg ggcgcagctc ggagaagagg cccttgatcg tcgggtggtg
      661 cccggcgtcc tccacctcgt cccagtgggc cccgtcgaac accggggtgg ccacccagtt
      721 ggcgggcatg gtccggggcc gggtcttgcg gtcgaccccg tcctcgcgcc cgctcgtgcc
      781 cgcgtcgggc tcgggggtct cgctcgacca gccgaagcgg gcggcgtagc cgaggtgcga
      841 ctcgagcacc tggcccacgt tcatccggga gggcacgccg agcgggttca ggatgatgtc
      901 caccggggtg ccgtcggaca ggtagggcat gtcctcgatc gggaggatct tggagatgac
      961 ccccttgttg ccgtggcgcc cggccagctt gtcgccctcg gagatcttgc gcttctgggc
     1021 gacgtacacc cggaccagct cgttcacccc ggggggcagc tcgtgggagc tgtcccggga
     1081 gaacacccgg acatcgatga ccttcccctc ctccccgtgg gggaccttga ggctggtgtc
     1141 gcggacctcg cgggccttct cgccgaagat cgcccgcagg aggcgctcct ccggcgtctg
     1201 ctcggtctcc cccttggggg tgaccttgcc gaccaggacg tcgcccggcc ccacctcggc
     1261 gccgatgcgg atgatgccgc gctcgtcgag gtcggccagg atctcctcgg agaggttggg
     1321 gatgtcccgg gtgatctcct cggccccgag cttcgtgtcc cgggcgtcga cctcgtgctc
     1381 ctcgatgtgg atcgaggtca gcacgtcgtc gcgcaccagg cgctccgaga ggatgatggc
     1441 gtcctcgtag ttgtagccct cccagggcat gaacgcgacc agcaggttct tgcccagcgc
     1501 gagctcgccg ttgtgggtcg agggcccgtc ggccaggagg tcgccgtcgg ccaccttctg
     1561 gccctcctcc acgagcggct tctggttgat gctcgtgttc tggttggagc gccggaactt
     1621 ggccaggcgg tagatcttgc gcccgaggtt gcggcccacc cggtccttct ggccgggccg
     1681 gtactcgacc acgatctggt cgcccgagac ctcggtcacc gtgccctcgc cctcggccag
     1741 caccacgtcg ccggcgtcgc gggccgcccg ggcctcgacg ccggtgccga tgtagggggc
     1801 ctcggggacg acgaggggga ccgcctgctt ctgcatgttg gcccccatga gggcccggtt
     1861 ggcgtcgtcg tgctcgacga aggggatgag ggcggtcgac accgagacga tctgcttcgg
     1921 cgagacgtcc atcaggtcca cctcggaggg cgggacgaag tcgatctcgc tcgtcgtgcc
     1981 gtaggtggtg gtggccgccc cgacccggac gccggtgccc tgggggcccc ggcggacgag
     2041 cacgcggtcc tcggtgaagt tgcccttgtc gtcgaccggc gcgttggcct gggcgatgac
     2101 gtgctcctcc tcctcgtcgg cggccaggta gaccacct
//
LOCUS       DATGJT010000355         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_877533, whole genome shotgun sequence.
ACCESSION   DATGJT010000355 DATGJT010000000
VERSION     DATGJT010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877533"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            320..1414
                     /locus_tag="VKX24_06075"
     CDS             320..1414
                     /locus_tag="VKX24_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014146084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HLJ08084.1"
                     /translation="MFADRIARARRRMEELGVDVLLLSVGADLPYFTGYTAMPLERLT
                     MLVLPRDGEATLVVPALEAPRVEERPEAFTTRPWGETEDPVAIVAALARAGAGPTPRA
                     AIGDRTWATFLLGLQEALPQSAFLPASRVTAPLRAVKDDAEIDALRAAARVVDAVALA
                     MRERPFAGRTEADISRELVDRMLEGGHERANFAIVASGPNAASPHHEPGDRVVAAGDS
                     VVCDFGGTMAGYCSDITRTFVVGQPGGELADLYEVLFRAQEEGVRAARVGVSCEAVDA
                     AARTVIGAAGYGDYFIHRTGHGIGLEEHEEPYLVSGNATPLAPGHAFSVEPGIYLPGR
                     CGARIEDIVVATEHGPERLNEAPRELAVVG"
     gene            1450..2271
                     /locus_tag="VKX24_06080"
     CDS             1450..2271
                     /locus_tag="VKX24_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08085.1"
                     /translation="MGGLFFAWVTTRRREVGIGYGWTVRTTYLVMALGGAGLGRWLES
                     GGPAALLRDVGAVGVAAATGVALWLSFARRRAGVEGERTLRRARAARVAAMTGVPRPD
                     RYDDTVAEFPPSADLVAPALGVAALAAAAVAGGGPFLLGFARLVCGAAFLGVVTDAML
                     LGHSYLTQPGLSRAPLKQLVRLGAWIWPVETLLLCLPRGMVQVVAGSIDDGASGLLGW
                     IWLLSTISTIVLLGVVEAALRERWYSAVMAATGLLYLAILTAFGQDLVARAVLGR"
     gene            2285..>2566
                     /locus_tag="VKX24_06085"
     CDS             2285..>2566
                     /locus_tag="VKX24_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08086.1"
                     /translation="MALDLDGRVALVTGGNRGIGRAIALALAEGGADVAVVYRRDEDA
                     AATTVKEIEALGRRVRAYAADVGSPPEVESMVAAVLADFGFVDVLVNNAG"
BASE COUNT          301 a          992 c          924 g          349 t
ORIGIN      
        1 gagcccgctc aacaccccgc agagcaagga cctgaacaag ggcgacacct tctcgatcac
       61 ctacaaccag cccgggagct acagctacat ctgcggcatc caccagtaca tgacggggac
      121 ggtcgaggtc gtgggctgac gcgacgaaac ggagcgggcc ccggcacagg cccgctccgt
      181 ctcgcgctcg ggagtgccac ctgcctcccc ccgaggatcg tcgccgcaaa gagaggaaca
      241 tgagaagcga cgacttcggc gagctacccc gcccgtccgc atccgaaacc gccgctcacg
      301 gccggtagcc tggccggcga tgttcgctga ccgcatcgcc cgggcccggc ggcgcatgga
      361 ggagctcggc gtcgacgtcc tgctgctgtc ggtcggcgcc gacctgccgt acttcaccgg
      421 ctacaccgcc atgcccctcg agcggctcac gatgctggtg ctaccccggg acggcgaggc
      481 gacgctggtc gtgccggccc tcgaggcgcc ccgggtggag gagcggcccg aggccttcac
      541 cacccggccc tggggcgaga cggaggaccc ggtggccatc gtcgccgccc tggcccgcgc
      601 cggcgccggc ccgacgccgc gggcggcgat cggcgaccgc acctgggcca ccttcctgct
      661 cggcctccag gaggccctgc cgcagagcgc cttcctgccc gcctcccggg tcaccgcccc
      721 gctgcgggcg gtgaaggacg acgccgagat cgacgccctc cgggccgccg cccgcgtcgt
      781 cgacgccgtc gccctggcca tgcgggagcg gcccttcgcc ggccgcaccg aggccgacat
      841 ctcccgggag ctcgtcgacc gcatgctgga gggcggccac gaacgggcca acttcgccat
      901 cgtggcctcc gggcccaacg ccgccagccc ccaccacgag cccggcgacc gggtcgtggc
      961 ggcgggtgac tccgtggtct gtgacttcgg cggcaccatg gccggctact gctccgacat
     1021 cacccgcacc ttcgtcgtcg gccagccggg cggcgagctg gccgacctct acgaggtcct
     1081 gttccgggcc caggaagagg gtgtccgggc cgcccgggtc ggcgtgtcgt gcgaggcggt
     1141 ggacgccgcc gcccgcacgg tcattggcgc cgcaggctac ggcgactact tcatccaccg
     1201 gacgggccac ggcatcggcc tcgaggagca cgaggagccc tacctcgtct ccggcaacgc
     1261 cacgccgctg gcgccgggcc acgccttctc cgtcgagccc ggcatctacc tcccgggccg
     1321 ctgcggcgct cggatcgagg acatcgtcgt cgccaccgaa cacggtcccg agcgcctcaa
     1381 cgaggcgccc cgcgaactgg cggtggtcgg ctgaagctcc aggtctcgac cgtcctgctc
     1441 cagtgggcgg tgggcggcct cttcttcgcc tgggtcacca cccgccgccg ggaggtgggc
     1501 atcggctacg gctggacggt gcgcaccacc tacctcgtca tggccctcgg cggggcgggg
     1561 ctcggccggt ggctggagtc cggcggcccg gcggcgctgc tgcgcgacgt cggcgccgtc
     1621 ggcgtcgccg ccgccaccgg cgtcgccctg tggctctcgt tcgcccgccg ccgggcgggc
     1681 gtggaagggg agcggacgct gcggcgggcc cgggccgccc gggtggcggc catgaccggc
     1741 gtcccccgcc ccgaccgcta cgacgacacg gtggcggagt tcccgccgtc cgccgacctg
     1801 gtggccccgg ccctcggcgt ggcggcgctg gcggcggcgg ccgtggccgg cggcggcccg
     1861 ttcctcctcg gcttcgcccg cctcgtgtgc ggcgccgcct tcctcggcgt cgtcaccgac
     1921 gccatgctcc tcgggcactc ctacctgacc cagcccgggc tgtcccgggc gccgctcaag
     1981 cagctcgtcc gcctcggggc gtggatctgg ccggtggaga cgctgctgct ctgcctgccc
     2041 cggggcatgg tccaggtcgt cgccggctcc atcgacgacg gcgccagcgg cctgctgggc
     2101 tggatctggc tgctgtcgac gatctccacc atcgtgctgc tgggcgtggt ggaggcggca
     2161 ctgcgggagc ggtggtactc ggcggtcatg gccgccaccg ggctgctcta cctcgccatc
     2221 ctcaccgcct tcgggcagga tctggtggcc cgggcggtgc tcggacgata ggagggttca
     2281 gcgcatggct ctcgacctcg acggacgggt ggccctcgtc accggcggca accgggggat
     2341 cgggcgggcc atcgccctcg ccctggccga gggcggcgcg gacgtggcgg tggtctaccg
     2401 ccgggacgag gacgccgccg ccaccaccgt caaggagatc gaggccctcg gccgccgggt
     2461 ccgggcctac gccgccgacg tcgggtcgcc gcccgaggtg gagtcgatgg tggctgcggt
     2521 gctggccgac ttcggcttcg tcgacgtcct cgtcaacaac gccggc
//
LOCUS       DATGJT010000356         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1395497, whole genome shotgun sequence.
ACCESSION   DATGJT010000356 DATGJT010000000
VERSION     DATGJT010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395497"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VKX24_06090"
     CDS             <1..394
                     /locus_tag="VKX24_06090"
                     /inference="COORDINATES: protein motif:HMM:NF019643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BBE domain-containing protein"
                     /protein_id="HLJ08087.1"
                     /translation="PEFGGGLVFDAYGGAINTVPPDATAFVHRADLCALQSSVSWSPA
                     ATPPEVDGAQAWLATTKASLAPFVSGAGYQNYIDPTLVDWAEAYYGTNLPRLVDVKRR
                     YDPDDVFHFAQSIPTTVPTSRSTAAAPR"
     gene            complement(407..865)
                     /locus_tag="VKX24_06095"
     CDS             complement(407..865)
                     /locus_tag="VKX24_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007621391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLJ08088.1"
                     /translation="MPDAERSIENLIYSYAGFVDDGDLEAMAGLFADATIGVDGMSAG
                     LRGREKIQELFRSTIRIHEDGTPRTKHVTTNVLIDVDDSNGTATARSYFTVLQAVEGL
                     GLQPIVAGRYRDRFERRDGQWSFVERRFTTDLIGDVSRHLLAGPEILGGA"
     gene            complement(887..1327)
                     /locus_tag="VKX24_06100"
     CDS             complement(887..1327)
                     /locus_tag="VKX24_06100"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ08089.1"
                     /translation="MATTFSHLGICVSDLERSLRFYCEALGFAPAESHSVGPEFAALM
                     ELEGVALRSQFIRRDGVAIELLHFSSPSTTGDPVRRPMNQLGLTHLSVRVDDVDGVAD
                     AVERLGGTVVSGTRTTFDMSGVALDFVYCTDPDGVRIELMRLPD"
     gene            1409..>2110
                     /locus_tag="VKX24_06105"
     CDS             1409..>2110
                     /locus_tag="VKX24_06105"
                     /inference="COORDINATES: protein motif:HMM:NF021599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2332 domain-containing protein"
                     /protein_id="HLJ08090.1"
                     /translation="MQSTPSVPGDYAGSGDLDTGKADLPTRFRNHAQVMARHGRSPLS
                     VALMRGAADDLERGGIVAELYTGVPLPAGQAPALRLLAALHRLVLAGQAPELAGYYPS
                     VGGYEHPDGAWEAAELTLRMNAADLAAVLRRGVQTNEPGRSAVLFGVLLWIADHFRRP
                     VRLLEVGASAGLNLLAEKYAYRNTGALLGDPDSPLVFEGPWVGTPVPDPAAAQEHLRL
                     VERRGCDIAPIDATSR"
BASE COUNT          312 a          780 c          706 g          312 t
ORIGIN      
        1 gcccgagttc ggcggaggtc tcgtgttcga cgcctacggc ggcgccatca acacggtgcc
       61 gcccgacgcc accgccttcg tccaccgggc cgatctctgc gccctgcagt cgagcgtctc
      121 gtggtcgccg gcggcgacgc cgccggaggt cgacggcgcc caggcctggc tggccaccac
      181 caaggcgtcc ctggctcctt tcgtgagcgg ggccggctat cagaactaca tcgaccccac
      241 cctggtcgac tgggccgagg cctactacgg gaccaacctg ccccgactgg tggacgtgaa
      301 acgccgctac gaccccgacg acgtcttcca cttcgcccag tccatcccca ccaccgtgcc
      361 cacgagccgc tcgaccgccg cggctccacg gtgacgaccc gttcgctcac gccccgccca
      421 ggatctcggg cccggccagg aggtggcggc tcacgtcacc gatgagatcg gtggtgaagc
      481 ggcgctcgac gaaagaccac tgcccgtcgc gccgttcgaa ccggtcccgg tagcgaccgg
      541 ccacgatggg ctgcaggccc agaccctcga cggcctggag cacggtgaag taggaccggg
      601 ccgtggccgt gccgttgctg tcgtcgacgt cgataaggac gttggtggtc acgtgcttgg
      661 tccggggcgt gccgtcctcg tggatccgga tcgtcgaccg gaacagctcc tggatcttct
      721 cccggccccg caggccggcg ctcatcccgt cgaccccgat ggtggcgtcg gcgaacaatc
      781 cggccatggc ctcgagatcg ccgtcgtcga cgaagccggc gtaggagtag atgaggttct
      841 cgatggaccg ttcggcgtcg ggcatgacga cgacggtacc ggaggatcag tcgggcaggc
      901 gcatcaactc gatgcgcacc ccgtcgggat cggtgcagta gacgaagtcg agggccacac
      961 ccgacatgtc gaaggtggtg cgggtgcccg acaccacggt gccgcccagt cgctccacgg
     1021 cgtcggccac gccgtccacg tcgtcgaccc gcaccgacag gtgggtcagt ccgagttgat
     1081 tcatggggcg tcgcaccgga tcaccggtgg tggagggcga gctgaagtgg agcagctcga
     1141 tggccacccc gtcacgccgg atgaactggg aacgcagggc caccccctcc agctccatca
     1201 gggcggcgaa ctcgggcccc acgctgtggg actcggccgg ggcgaatccg agcgcctcgc
     1261 agtagaagcg cagcgaccgc tccaggtccg acacacagat gccgaggtgc gagaacgtcg
     1321 tcgccatggc ggctcctcct tcgtcggggc cgagctttcc cgatcaggga cggcaccggg
     1381 gccatactgc cgctgccata ctgtcggagt gcagagcact ccttcggttc cgggggacta
     1441 cgccggatcg ggggacctcg ataccggcaa ggccgatctg cccacccgct tccgcaacca
     1501 cgcccaggtc atggcccgtc acggacgttc gccgctgtcg gtcgccctca tgcggggtgc
     1561 ggccgacgat ctcgagcgcg gcgggatcgt ggccgagctg tacaccggcg tccccctccc
     1621 cgccggccag gccccggccc tgcggctcct ggccgctctc caccgcctgg tgctggccgg
     1681 ccaggctccc gaactggccg gttactaccc gagcgtgggg ggctacgaac atcccgacgg
     1741 cgcctgggag gcggccgagc tgaccctgcg catgaacgcc gccgatctgg ccgccgtgct
     1801 ccggcgcggc gtgcagacca atgagcctgg ccgctcggcc gtgctcttcg gggtcctgtt
     1861 atggatcgcc gatcacttcc gccgaccggt gcgtctgctc gaggtcgggg ccagcgccgg
     1921 gctcaacctg ctggccgaga aatacgccta ccgcaacacc ggcgccctgc tcggcgatcc
     1981 cgactccccc ctcgtcttcg aaggtccctg ggtggggacc ccggtgcccg acccggccgc
     2041 ggcccaggag cacctccgac tggtcgagcg gcgcggctgc gacatcgccc ccatcgacgc
     2101 caccagtcgc
//
LOCUS       DATGJT010000357         2658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_877704, whole genome shotgun sequence.
ACCESSION   DATGJT010000357 DATGJT010000000
VERSION     DATGJT010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877704"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..861
                     /locus_tag="VKX24_06110"
     CDS             88..861
                     /locus_tag="VKX24_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013133493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08091.1"
                     /translation="MKTATQSNGTSVPVIDLHSVSKTYGNGKIEVTALHSVDLTVERG
                     EFLAIMGPSGSGKSTMMNIIGCLDVPTRGRFSLDGVDVRTLDEAALAQVRLRKIGFVF
                     QSFNLIPRTSALANVELPLIYQCVKPKERRQRALAALDAVGLGDRADHLPSELSGGQQ
                     QRAAVARALVSDPALLLADEPTGNLDSASTAEVMALFAKLHAEGHTVVLITHEDEVAS
                     YASRVVRLRDGRVQSDERRTGPGPGADGLAAPTLQGVAS"
     gene            858..2081
                     /locus_tag="VKX24_06115"
     CDS             858..2081
                     /locus_tag="VKX24_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003081911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08092.1"
                     /translation="MTREAIKIALRGVGSNKLRSALTVLGILIGVGAVIVLVAVGTGS
                     SAAVQSRIQALGTNTLTVFNRGGAVRGQVGPQTQRVTITDADVTALNDKLQAPDLVAA
                     SPVVSVNGATATFGTASTTIGQMVGTDPAYMTTTDRPIAAGRDITADDVGSHSRVAVI
                     GQTTAANLFPPGTNVIGQTIQINNVAYNIVGIQAAKGTNGNQDLDDIVIAPDTAVVDT
                     LAGRTTGYSQIVAQAKSSKVMDQAQAEVLTILDSRHNISDGSTSPFSVLNQGSLLATS
                     ESTTRTFTVLLAAVAAISLLVGGIGVMNIMLVSVTERTREIGIRKAIGAPKRAIVTQF
                     ISEAVILSLIGGAAGVAAGLIGSRFRIVGIQPVIAAYSIPLAFGVAIAVGLFFGIYPA
                     NRAASLRPIEALRHE"
     gene            2114..>2658
                     /locus_tag="VKX24_06120"
     CDS             2114..>2658
                     /locus_tag="VKX24_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08093.1"
                     /translation="MNPDDTLPPVPPAPAPASADDGDLWPSSGPAKGFRVRLPIAIAA
                     LVVVALGGAAAGASLKKTPSTTTQAGAIGNRARGNLGTNGAGATGANGARAFGPNGGG
                     VFGTVSKVDGNTVTVTQRDGSTATVVVPSTATITKTVSGSITDLKPGTSVVVRGTTAN
                     GTTTAQDVTIAPAGSNGAFGG"
BASE COUNT          396 a         1044 c          868 g          350 t
ORIGIN      
        1 cttcggtggc ggcggcgggt tcggcggcgg cggcttcggc ggcggcggcg gattcgtcgg
       61 cggcgccggc ggcaagggct gaccgagatg aagaccgcaa cgcagagcaa cggcacttcg
      121 gtcccggtca tcgacctcca ctcggtgtcg aagacctacg gcaacggcaa gatcgaggtg
      181 accgccctcc actcggtcga cctcaccgtc gagcggggcg agttcctggc catcatgggc
      241 ccgtcgggct cgggcaagtc gacgatgatg aacatcatcg gctgcctcga cgttccgacc
      301 cgggggcggt tctccctcga cggcgtcgac gtccgcacgc tggacgaggc ggccctggcc
      361 caggtccgct tgcgcaagat cggcttcgtc ttccagagct tcaacctcat cccccgcact
      421 tcggccctgg ccaacgtgga gctcccgctg atctaccagt gcgtgaagcc caaggagcgc
      481 cggcagcggg cgctggccgc cctcgacgcc gtcggcctcg gcgaccgggc cgaccacctc
      541 ccctcggagc tgtccggcgg ccagcagcag cgggccgccg tggcccgggc gctggtctcc
      601 gaccccgccc tcctgctggc cgacgagccg accgggaacc tcgactccgc ctcgaccgcc
      661 gaggtgatgg ccctcttcgc caagctccac gccgagggcc acacggtggt gctgatcacc
      721 cacgaggacg aggtggcgtc ctacgcctcc cgggtcgtgc gcctccgcga cggccgagtc
      781 cagtccgacg agcggcgcac cggccccggc ccgggtgccg acgggctcgc cgccccgacc
      841 ctccaggggg tggcgtcgtg acccgcgaag ccatcaagat cgccctccgg ggcgtcggtt
      901 ccaacaagct gcgctcggcg ctgaccgtgc tcggcatcct catcggcgtc ggcgccgtca
      961 tcgtgctggt ggcggtgggg acgggctcct cggcggcggt gcagtcccgc atccaggcgc
     1021 tcggcaccaa cacgctcacg gtcttcaacc gcggcggagc ggtgcggggc caggtcggcc
     1081 cgcagacgca gcgggtcacg atcaccgacg ccgacgtcac cgccctcaac gacaagctcc
     1141 aggcccccga cctggtggcc gcctcgccgg tggtgtcggt caacggcgcc accgccacct
     1201 tcggcaccgc cagcacgacg atcggccaga tggtcggcac cgaccccgcc tacatgacga
     1261 ccaccgaccg cccgatcgcc gccggccggg acatcaccgc cgacgacgtc gggagccaca
     1321 gccgggtggc ggtcatcggc cagaccacgg ccgccaacct cttcccgccc ggcaccaacg
     1381 tcatcggcca gacgatccag atcaacaacg tggcctacaa catcgtgggc atccaggcgg
     1441 cgaagggcac caacggcaac caggacctcg acgacatcgt gatcgccccg gacaccgcgg
     1501 tggtcgacac gctggccggc cggaccacgg gttacagcca gatcgtggcc caggccaagt
     1561 cgtcgaaggt gatggaccag gcccaggccg aggtcctcac gatcctcgac tcccgccaca
     1621 acatctcgga cgggtcgacg tcgccgttca gcgtcctcaa ccagggcagc ctgctcgcca
     1681 cctcggagtc caccacccgc accttcaccg tgctgctggc ggcggtggcg gccatctccc
     1741 tgctcgtcgg cggcatcggc gtgatgaaca tcatgctggt cagcgtcacc gagcggaccc
     1801 gggagatcgg catccgcaag gccatcggcg cccccaagcg ggccatcgtc acgcagttca
     1861 tcagcgaggc cgtgatcctc tcgctgatcg gcggggcggc cggcgtggcc gccgggctga
     1921 tcggcagccg gttccggatc gtcggcatcc agccggtgat cgccgcctac agcattcccc
     1981 tcgccttcgg cgtggccatc gccgtcggcc tcttcttcgg catctacccg gccaaccggg
     2041 ccgcctccct ccgtccgatc gaagccctgc gccacgagta ggcgtccccc tttccctgca
     2101 aggagcgact gacatgaacc ccgacgacac gcttcccccc gtcccgccgg cccccgcccc
     2161 cgcctccgcc gacgacggcg acctgtggcc gagctcgggc ccggccaagg gtttccgggt
     2221 ccgcctgccc atcgccatcg ccgccctcgt ggtcgtggcc ctcggcggcg ccgcagccgg
     2281 cgccagcctg aagaagacgc cgtcgacgac cacccaggcc ggggccatcg gcaaccgggc
     2341 ccggggcaac ctcgggacca atggtgcagg cgccaccggt gccaacggcg cccgggcctt
     2401 cgggcccaac ggcggcggcg tcttcgggac cgtcagcaag gtcgacggca acacggtcac
     2461 cgtgacgcag cgggacggct cgacggccac cgtcgtcgtc ccctcgacgg ccacgatcac
     2521 caagaccgtc tccgggtcga tcaccgacct caagcccggc acgtcggtcg tggtgcgggg
     2581 gacgacggcc aacggcacca ccacggccca ggacgtcacc atcgccccgg ccggctcgaa
     2641 cggcgccttc ggcggctt
//
LOCUS       DATGJT010000358         2156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_47767, whole genome shotgun sequence.
ACCESSION   DATGJT010000358 DATGJT010000000
VERSION     DATGJT010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47767"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..178
                     /locus_tag="VKX24_06125"
     CDS             <1..178
                     /locus_tag="VKX24_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020500403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08094.1"
                     /translation="DRRSRAGAGAGLGLSIAQGIVRAHRGEISVQNVGTGCRFTIRLP
                     FAGREGRETVEVGS"
     gene            175..1221
                     /locus_tag="VKX24_06130"
     CDS             175..1221
                     /locus_tag="VKX24_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLJ08095.1"
                     /translation="MRVLVTGGAGFIGSAVVDALAGQGIDVVVLDALLPAAHQGMPGY
                     LNPDASYRWANCCDPAAVAEAVQNIDVVSHQAAMVGMGVDFADTPAYARNNDLGTAVL
                     LAGLAAARFAGRLVLASSMVVYGEGRYRCPVDGLVQPLPRTPERLRERAFEPQCPRCG
                     GDVEPEPVPESAALDPRSVYAATKAHQEQLCACFARETGCALTVLRYHNVYGPRMPAR
                     TQYAGVAAIFRSALASGQPARVFEDGGQRRDFVHVDDVARANLLAAQDRSAGWHVCNV
                     ASGRPVSILEMARALAAANGAGTPAPVVTGEFRLGDVRHVFASTHEAETVLGFRAAVG
                     PEEGMRRFATAELR"
     gene            1329..2042
                     /locus_tag="VKX24_06135"
     CDS             1329..2042
                     /locus_tag="VKX24_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017562845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08096.1"
                     /translation="MLDGVDFDVPAGGHAALVGPSGAGKTTLLALIGGLEPVQSGRLV
                     VGGQDVSALSGDGLAAYRRLTVGFVFQHFGLLDALSALENVELAAVLAGEPRSRRRAR
                     ARELLEAVGMTPRAEHRPAALSGGERQRVAIARALVNGPRLVLADEPTGNLDEDTSVE
                     VMGLLESLRRERGCTLMVVTHERALAARAPIHLALDHGKVVATSGPASAGPEGGSGPG
                     LAVGPGVARGGSPRVEEEP"
BASE COUNT          238 a          753 c          868 g          297 t
ORIGIN      
        1 ggatcgccgt tctcgtgccg gggccggggc ggggctgggg ctgagcatcg cccagggcat
       61 cgtccgcgcc caccgaggtg agatctcggt gcagaacgtc ggcaccggct gccgcttcac
      121 gatccggttg ccgttcgccg ggcgggaggg ccgggagacg gttgaggtgg ggtcgtgagg
      181 gtactggtga ccggaggcgc cgggttcatc gggtcggcgg tcgtcgatgc gctggcgggg
      241 caggggatcg acgtggtcgt gctcgacgcc ctcctgccgg cggcgcacca ggggatgccg
      301 ggctacctga accccgatgc cagttaccgc tgggcgaact gctgcgaccc ggcggcggtg
      361 gccgaggcgg tgcagaacat cgacgtcgtg tcccaccagg cggcgatggt cgggatgggg
      421 gtcgacttcg ccgacacgcc ggcctacgcc cgcaacaacg acctgggtac cgcagtcctc
      481 ctggccggtc ttgcggcggc ccggttcgcc gggcggctgg tcctggcaag cagcatggtc
      541 gtctacgggg agggccgcta ccgctgcccg gtcgacggcc tcgtgcagcc cctcccacgc
      601 acgcccgagc ggctgcgcga gcgggcgttc gagccgcagt gcccccgctg cggcggcgat
      661 gtcgagccgg agccggtgcc cgagtcggcc gcgctcgatc cccggagcgt ctatgcggcg
      721 acgaaggccc atcaggagca gctgtgcgcc tgcttcgccc gggagaccgg ctgcgccctc
      781 accgtgctgc gctaccacaa cgtgtacggc ccgcggatgc cggcccggac ccagtacgcc
      841 ggggtcgccg ccatcttccg cagcgccctg gcgtcaggcc agccggcccg ggtgttcgag
      901 gacggaggcc agcgccggga cttcgtgcac gtcgacgacg tcgcccgggc gaacctgctg
      961 gcggcccagg accgctcggc cgggtggcac gtctgcaacg tcgccagcgg ccggccggtc
     1021 tccatcctgg agatggctcg ggcgctggcc gctgccaacg gtgcgggtac tccggcaccg
     1081 gtggtgaccg gcgagttccg gctgggcgac gtgcgccacg tcttcgcctc gacgcacgag
     1141 gccgagacgg tgctcgggtt ccgggcggcc gttgggcccg aggaggggat gcggcggttc
     1201 gccacggcgg agctgcgctg accgggaacg gccaaccggc gccggctggc gacgtccccg
     1261 agcacgggtg cgccgtcgcc gcccggggcc tccgccacgc ctaccagggg ccgtccggtg
     1321 aggtcctggt gctcgacggc gtcgacttcg acgtgccggc cggcggccac gccgcgctgg
     1381 tcggcccgtc gggggccggg aagacgacgc tgctggcgct gatcggcggc ctggagccgg
     1441 tgcagtccgg ccgcctcgtg gtcggcggtc aggacgtctc ggcgctttcc ggggacgggc
     1501 tggcggccta ccgccggctg accgtgggct ttgtcttcca gcacttcggg ctgctcgacg
     1561 cgctgagcgc gctggagaat gtggagctcg ccgccgtgct ggcgggcgaa ccgaggagtc
     1621 gccgccgggc ccgcgcccgg gagctgctcg aggccgtcgg catgacgccc cgggccgagc
     1681 accggccggc ggcgctgtcc ggcggggagc ggcaacgggt ggcgatcgcc cgggcgctgg
     1741 tcaacggccc gaggttggtg ctggccgacg agccgaccgg gaacctggac gaggacacct
     1801 ccgttgaggt gatgggcctg ctggagtccc tgcgccggga gcgggggtgc acgctgatgg
     1861 tcgtgaccca cgagcgggcg ctcgccgccc gcgctcccat ccacttggca ctcgaccacg
     1921 gcaaggtcgt ggcgacgtcg ggcccggcat cggccggtcc ggaggggggt tccgggcctg
     1981 gtctggcagt tggtcccggg gtggcccgcg ggggcagccc ccgggtcgag gaggagccat
     2041 gagctgggcc gacgccgtcc gcctcgccgc ccgcagcgtc ctgcggcggc ccgggcgggc
     2101 ggcgctgacc gtcgtggccg tcgcgctggc ggcggcgctg ttcacggcga tgttga
//
LOCUS       DATGJT010000359         3961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_461575, whole genome shotgun sequence.
ACCESSION   DATGJT010000359 DATGJT010000000
VERSION     DATGJT010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461575"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..1203)
                     /locus_tag="VKX24_06140"
     CDS             complement(166..1203)
                     /locus_tag="VKX24_06140"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ08097.1"
                     /translation="MARPSPPRRAHTVEFGTLVGLEDLAAEELGELLGGKGPIDRTRP
                     GFLRVRLHDLSLAERPRIAGVAYLVSHFEVPRPKALLGSQHLDALTGELRHVVGRHPG
                     RFTGVRLGAAGASSPVMQRLAAALAESVSLPVDPDDGDLVVRVYPDAGGWTAAIRLTP
                     RPLSARPWQVVGFPGALESTVAAAMVRLGRPHADDVFVDPCCGSGTIAIERVTAGPAR
                     GVLAVDLDSYALGALRNNIAAAGSVAVTPVHGDASRLPFGAAQVSSMAANPPWGHQMG
                     TPELTRELYPSLLAEAARVTRPGSRFVLLSHQVRWTQRVLAESPHWSIERERSLTLRG
                     HHPRIWTLVRS"
     gene            1434..2210
                     /locus_tag="VKX24_06145"
     CDS             1434..2210
                     /locus_tag="VKX24_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014058934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ08098.1"
                     /translation="MSEQTEKGVVEQRFDLKGGGEVVPGLRWTPEGASGPRPTVLIGH
                     GGTQHKRTPNVLGLARRFVRHLGYSAVALDAPGHGERVTDPEAAERRRQALQERIAAG
                     PGGEERAFGPEEAAEWVERTTKGVAEWKALLDDLDAEQPGNRYGYWGVSMGTAIGLPF
                     VSAEPRISAAVLGLAGLGNRPGAEGFEQAARALTVPVLLVLQWNDELVGQSAGMALFD
                     AIGSAEKTAHVNPGGHVQTPLFERDSYEAFFRRHLGAAEG"
     gene            complement(2224..3591)
                     /locus_tag="VKX24_06150"
     CDS             complement(2224..3591)
                     /locus_tag="VKX24_06150"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ08099.1"
                     /translation="MVDGDREADVCVIGAGFAGLSAARELQRAGLSVVVLEARDRVGG
                     RIWTERLSDGTPVDRGGAWLAPQHDAAFSLVGQLGVSTYKTWVAGSHLLVGDGRIRRY
                     RGLIPKISPLAVLGIAAAQFRIDLTARAVPVDAPWEARRAKEWDERSVASWLEHSGIP
                     TGIGRDLFDMAVRGLFATNLEKVALLHLFFLVHAHRNTKTLFSIEGGAQENLVDGGLG
                     SVAEKAAEALGDALCLSTPARSLTQRADSVLVGADRFTVTCREVVVAVPPALVLDIAF
                     DPALPGDRRSLYESAVAGQETKTLVVYDAPFWRDDGLSGQSAGPGSPAEVTIDSSPAD
                     GARGVLASFTFGPVAERFDALEPSERRTRLLEALCARFGPKAGHPQEVVETPWWQEPW
                     TRGCSMAHLPPGQLTRHGRLLREPMGRVHWAGTETATVSHGAVDGAIRSGQRAATEIL
                     EAETG"
     gene            complement(3653..>3961)
                     /locus_tag="VKX24_06155"
     CDS             complement(3653..>3961)
                     /locus_tag="VKX24_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014048776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HLJ08100.1"
                     /translation="LREVARSLGGPLVGYATEVEQVALRVLAELKPGRELYTNVEYYA
                     GVVMNSCGVPRDMFTPTFAVARTVGWTVNVLEQMADNRLIRPTARYVGPPPPQPVPSP
                     "
BASE COUNT          559 a         1433 c         1473 g          496 t
ORIGIN      
        1 cgatctcctg tcacaaccat gaccccgggc gccccagccc cgtcctcgac gagtggaacg
       61 cggacaccgg cccgagtgcg cccaccgatt ctttgcctcg ggtgccgggt cacggttgtt
      121 gggtcgtgcc tcagcgtcgg catcgggtac cggccaggag ggcggtcacg agcgaacgag
      181 agtccagatg cgcgggtgat gtcctcgcag ggtcaggctg cgctctctct cgatgctcca
      241 gtgcgggctc tcggccagca cccgctgtgt ccagcgcacc tggtgtgaga gcaggacgaa
      301 ccgactcccc ggcctcgtga cgcgcgcggc ctccgcgagc agcgacgggt acagctcccg
      361 ggtcagttcc ggggtcccca tctggtgacc ccacggcgga ttggccgcca tcgacgagac
      421 ctgcgcggca ccgaagggga gccgagaagc atcaccgtgg accggggtga ccgcgaccga
      481 tcccgctgcg gcgatgttgt tcctgagcgc gcccagcgcg taggagtcga ggtccacggc
      541 gaggacgccg cgggcggggc cggcggtcac ccgctcgatg gcgatcgtgc ccgagccgca
      601 gcaggggtcg acgaacacgt cgtcggcgtg gggacgaccg agacgcacca tcgccgccgc
      661 caccgtggat tcgagggctc cagggaaccc gacgacctgc cagggtcggg cggagagcgg
      721 ccgaggggtg agccggatcg ccgcagtcca gcccccggcg tcggggtaca cgcggacgac
      781 caggtcgccg tcgtcggggt cgaccggcaa gctgacggac tcggcaagcg cggctgccag
      841 ccgctgcatg accgggctgg atgcccccgc ggcacccagg cgcacacccg tgaagcggcc
      901 cgggtgcctg cccacgacgt ggcggagctc cccggtgagc gcgtcgaggt gctggctccc
      961 gagcagcgcc ttcggccggg gaacttcgaa gtgagagacg aggtaggcca cgcccgcgat
     1021 gcgggggcgc tcggcgaggc tgaggtcgtg gagccggact cgaaggaatc cgggacgcgt
     1081 ccgatcgatc gggcctttac ccccgaggag ctcgccgagc tcctcggcgg ccagatcctc
     1141 gagcccgacc agcgtgccga actcgacggt atgggctcgg cggggcgggc ttggccgcgc
     1201 catctacgcc gctcgcagcc ggagctcggc cggcaggccg gcggatcggg gaggagggag
     1261 cgtcgcccgc acgctccgac cctatgcgca gggccgatcg gcaccggggg cggcgccgcg
     1321 gcgaccggcc gtccactcgt gggtcggtcc ccgcggtcgc tgatctagcg tctcggagcg
     1381 catccgcaca gcccgggacg cagccaacgg ggaaaggtgg gccagtggac atcgtgagcg
     1441 aacagacgga gaagggggtc gtcgagcaac gtttcgacct gaagggcggc ggcgaggtgg
     1501 tccccggact tcgctggacc ccggagggcg cgtccggccc acgcccgacc gtgctcatcg
     1561 gccacggggg gacccagcac aagcgcaccc ccaacgtcct cgggctcgcc cggcggttcg
     1621 tccggcatct cggctactcg gccgtcgccc tcgacgcccc cggccacggc gagcgggtca
     1681 cggaccccga ggcggccgag cgccgtcgcc aggcgctcca ggagcggatc gccgccgggc
     1741 cgggcggcga ggagcgtgcg ttcggtcccg aggaggccgc cgagtgggtc gagcggacca
     1801 ccaagggcgt ggccgaatgg aaggccctcc tcgacgacct cgacgcggag caacccggta
     1861 accggtacgg ctactggggc gtgtccatgg ggacggccat cggcctgccg ttcgtgtcgg
     1921 cggagccccg gatctccgcc gccgtgctcg ggctcgccgg gctgggcaac cgtccggggg
     1981 ccgagggctt cgagcaggcc gcccgcgccc tcacggtgcc ggtgctcctc gtcctccagt
     2041 ggaacgacga gctggtcggc cagtcggccg gcatggccct cttcgacgcc atcgggtcgg
     2101 ccgagaagac cgcgcacgtc aaccccggcg gccacgtgca gaccccgctc ttcgagcggg
     2161 actcctacga ggcgttcttc cgccgccatc tcggggccgc cgaaggctga ggccccggcg
     2221 ccctcagccc gtctccgcct ccaggatctc ggtcgccgcc cgctgccccg agcggatcgc
     2281 gccgtcgacg gcgccgtggg acaccgtggc cgtctcggtg ccggcccagt gcacccggcc
     2341 catcggttcc cggagcagcc ggccgtggcg ggtgagctgt cccggcggga ggtgtgccat
     2401 ggaacagccg cgggtccagg gctcctgcca ccacggggtc tcgacgacct cctggggatg
     2461 gccggccttc gggccgaagc gagcgcacag cgcctcgagc agccgggtcc gacgttcgga
     2521 gggctccagc gcgtcgaagc gttcggcgac gggcccgaag gtgaacgatg ccagcacccc
     2581 gcgggcgccg tcggcggggg aggagtcgat ggtgacctcg gccggcgatc ccggccccgc
     2641 gctctgcccg ctcagtccgt cgtcccgcca gaacggcgcg tcgtagacca cgagggtctt
     2701 ggtctcctgc ccggcgacgg cgctctcgta gagggaccgg cgatcgccgg ggagcgccgg
     2761 atcgaaggcg atgtcgagga cgagtgccgg cgggacggcg acgacgacct cccggcaggt
     2821 gacggtgaac cggtcggcgc cgacgaggac cgaatcggcg cgctgcgtga gtgaacgtgc
     2881 cggcgtcgag agacagagcg cgtcacccag ggcctcggcg gccttctcgg ccacggagcc
     2941 caacccgccg tcgacgaggt tctcctgggc accgccctcg atcgagaaga gcgtcttcgt
     3001 gttgcggtgc gcgtggacga ggaagaacag atggagcagc gccaccttct ccaggttggt
     3061 ggcgaagagg ccgcgcaccg ccatgtcgaa gaggtcgcgc ccgatgcccg tcgggatgcc
     3121 cgagtgctcg agccacgagg cgacggagcg ctcgtcccac tccttggccc gccgtgcttc
     3181 ccagggggcg tcgaccggca ccgccctcgc cgtcaggtcg atccggaact gggcggccgc
     3241 gatgccgagg accgccaggg gactgatctt cgggatcagc ccccggtagc ggcggatgcg
     3301 gccgtcgccg acgagcaggt ggctgccggc gacccacgtc ttgtaggtcg agacgccgag
     3361 ctggccgacg agggagaacg ccgcgtcgtg ctggggggcc agccaggccc cgccgcggtc
     3421 gaccggggtc ccgtccgaga gccgctcggt ccagatgcgg ccgcccaccc ggtcccgcgc
     3481 ctcgagcacg acgaccgaca ggcccgcccg ctgcagctcc cgtgccgcgc tgagcccggc
     3541 gaacccggcc ccgatgacgc acacgtcggc ctcccggtcg ccgtcgacca tctccccctc
     3601 caatcgccgg agcgctcccg ggtcactacc acgcggagca cgctccccgc cgtcagggcg
     3661 aggggaccgg ctgaggcggg ggtggcccga cgtagcgggc ggtcggccgg atcaggcggt
     3721 tgtccgccat ctgctcgagg acgttcaccg tccagccgac ggtccgggcg acggcgaagg
     3781 tcggcgtgaa catgtcgcgg ggcaccccgc agctgttcat gacgaccccg gcgtagtact
     3841 cgacgttcgt gtagagctcg cggcccggct tgagctcggc gagcacccgc agcgccacct
     3901 gttcgacctc ggtcgcgtac cccacgagcg ggccgccgag agagcgggcc acctcccgca
     3961 g
//
LOCUS       DATGJT010000360         3039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_462024, whole genome shotgun sequence.
ACCESSION   DATGJT010000360 DATGJT010000000
VERSION     DATGJT010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462024"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VKX24_06160"
     CDS             complement(<1..774)
                     /locus_tag="VKX24_06160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08101.1"
                     /translation="MKRFVIATASALFLIAGNAFASVPAGPTPGSGAGSPPSAIAAGA
                     PGTTPTPAASAGVSPFASGVLTGIFAAPDLGLPGLPGSASDLLGSVDPVLSGVTGAVP
                     APVAGLVPAPLSGLVAPPSAAPAPVAPPAPVPGLTPPPSASPPSGSQAPPPAKRHASV
                     STRRVSPKAVQAAAAAALFQGLPPTGYAGYGTASVIHTDLLQVGTQRLENLDAAFSGA
                     AFSSAPLAQPTTNEMARIVAPALSAGNAYGRGSGLEVGVA"
     gene            complement(922..>3039)
                     /locus_tag="VKX24_06165"
     CDS             complement(922..>3039)
                     /locus_tag="VKX24_06165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011720336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HLJ08102.1"
                     /translation="GFSGLLHLLRPASQVGNGLRGWRRAGGVVGAAVGHPLRSLAGPW
                     GAGLILGALAFVGCLILLRLSFDQVWRGLQRAAVAAWQAMGGGLRRLTTLSGPAAGRG
                     DVVAADLHTLDTAPAPPARQFRPGIDHDEEPLEPGGDAENAAEDEDLTAALTVDVPAE
                     PAGPGDAETATGTATSPRTGDDLVLQSPAFLDQPAGPPKQLELGLVPADQQWKLPAPS
                     CLTRKVAKPIDRRLVEKGGETLEATMLEFGVDAHLVGMTIGPTVTRYELELGPGVKVN
                     KVTGLSHDIAYAMASPDVRIIAPIPGRSAIGVEVPNRQRQLVNLGDVLVDDEVAAGAR
                     PAPLHPLEVGLGRDIAGKPFSVNLATMPHLLIAGATGAGKSSCINSLITSILMRATPD
                     QVRLILIDPKRVELGQYNGVPHLLTPVVVNPKKAANALDWAVREMELRYDLLHEAGFR
                     DITGYNAAFDRGDLRRDPLEGGPLEGGTAYDRLPFIVVVVDELADLMMVAARDVETSI
                     CRIAQMARAVGIHLVIATQRPSVDVITGVIKANVPSRLAFSVSSLADSRVILDTPGAE
                     KLIGKGDMLLLTASSSRPQRIQGAWVEEADVHKVVAHWRRQTKELHYVEAIQGDGPEG
                     GPGAAGDSDETDDLLDEAMELVVRSGLGSTSMLQRKLRVGFSRAGRLMDLLERRGVVG
                     PSEGSKARAVLMTVEELEALPGR"
BASE COUNT          422 a         1043 c         1189 g          385 t
ORIGIN      
        1 ggccacaccg acctcgagac cgctgccccg cccgtaggcg ttgccggcgg agagggcggg
       61 ggccacgatc cgggccatct cgttggtggt gggctgggcc agcggcgcgg aggagaaggc
      121 ggccccggag aaggcggcgt cgaggttctc gagccgctgc gtgccgacct ggaggaggtc
      181 ggtatggatg acgctggccg tgccgtagcc ggcgtagccg gtcggcggca ggccctggaa
      241 cagggcggcg gccgccgcgg cctgcacggc cttcggcgag acccgccggg tcgacaccga
      301 ggcgtgccgc ttggccggcg ggggagcctg ggacccggac ggcggcgacg ccgacggcgg
      361 cggcgtcagg ccggggacgg gtgccggcgg cgcgaccggg gccggggcgg cggacggcgg
      421 ggcgaccaga ccggagagcg gcgcgggcac gagcccggcg acgggcgccg gcacggctcc
      481 ggtcaccccg gacagcaccg ggtcgaccga gccgagaaga tcggaggcgc tgcccggcag
      541 cccgggcagg ccgaggtcgg gagcggcgaa gatcccggtg aggacgccgg aggcgaacgg
      601 cgagacaccg gccgaggcgg ccggggtcgg cgtcgttccg ggggctccgg cggcgatggc
      661 ggacgggggg ctcccggccc ccgaccccgg cgtgggcccg gcggggaccg acgcgaaggc
      721 gttgccggcg atcaggaaca gggcggaggc cgtggcgatg acgaagcgct tcatgtgacc
      781 ctccagcggc gagcggcggt cgtcctctac ccctccgacc tggtaatcac acccatgaag
      841 gaacaggaaa tcggacgagc cgcaccaact tcacatccac aacattagtg agcttcttcc
      901 ccaactccaa acgtgggccg ttcaccggcc ggggagggcc tcgagttcct cgacagtcat
      961 gaggaccgcc ctggccttcg agccctcgga gggcccgacc acgccgcgcc gctcgaggag
     1021 gtccatgagc cgcccggcgc gggagaaccc tactcgcaac tttcgctgga gcatcgaagt
     1081 cgatccgagc ccgctgcgga ccaccagctc catggcctcg tcgagtagat cgtcggtctc
     1141 gtcggagtcg ccggcggcgc ccgggccacc ctcgggcccg tccccctgga tcgcctcgac
     1201 gtagtgcagc tccttcgtct ggcgccgcca gtgggccacc accttgtgga cgtcggcctc
     1261 ctcgacccac gccccctgga tccgctgcgg ccggctggac gacgccgtga gcaggagcat
     1321 gtcgcccttc ccgatgagct tctcggcgcc gggcgtgtcg aggatgaccc gggagtcggc
     1381 caagctggag accgagaacg ccagccggga cggcacgttg gccttgatga cgccggtgat
     1441 gacgtcgacc gagggccgct gggtggcgat caccaggtgg atccccaccg cccgggccat
     1501 ctgggcgatg cggcagatgc tggtctcgac gtcgcgggcg gcgaccatca tcaggtcggc
     1561 cagctcgtcg acgaccacca cgatgaacgg caggcggtcg tacgcggtgc cgccctcgag
     1621 ggggccgccc tcgagcggat cgcggcggag gtcgccccgg tcgaaggcgg cgttgtagcc
     1681 ggtgatgtcg cggaagccgg cctcgtggag caggtcgtag cgcagctcca tctcccggac
     1741 cgcccagtcg agggcgttgg ccgccttctt cgggttgacg accaccgggg tcagcagatg
     1801 cggtacgccg ttgtactggc cgagctcgac ccgcttgggg tcgatgagga tcagccgcac
     1861 ctggtcggga gtggcccgca tgaggatgct ggtgatcagc gagttgatgc agctcgactt
     1921 gcccgccccg gtggccccgg cgatcaggag atggggcatc gtggccaggt tgacgctgaa
     1981 gggcttgccg gcgatgtcgc gcccgaggcc gacctcgagc gggtgcagcg gcgccggccg
     2041 ggcgccggcg gcgacctcgt cgtcgacgag cacgtcgccg aggttgacca gctggcgctg
     2101 ccggttgggg acctcgacgc cgatggcgct gcgcccgggg atcggggcga tgatgcggac
     2161 gtcggggctg gccatggcgt aggcgatgtc gtgggacagc ccggtgacct tgttcacctt
     2221 gacgccgggg ccgagctcca gctcgtagcg ggtcaccgtc gggccgatgg tcatgcccac
     2281 gaggtgggcg tcgacgccga actccagcat cgtggcctcc agcgtctcgc cccccttctc
     2341 gaccagccgg cggtcgatgg gcttggccac cttgcgggtc aggcaggagg gcgccgggag
     2401 cttccactgc tgatcggccg ggacgaggcc gagctccagc tgcttcggcg gaccggcggg
     2461 ctggtcgagg aacgccgggc tctggaggac gaggtcgtcg ccggtcctcg gcgaggtggc
     2521 ggttccggtg gcagtttcgg cgtcccccgg gccggccggc tcggccggaa cgtcgacggt
     2581 cagggcggcg gtgaggtcct cgtcctcggc ggcgttctcg gcgtcgcctc cgggttcgag
     2641 cggttcctcg tcgtggtcga tgccgggccg gaactgacgc gccggcggcg cgggagcggt
     2701 atcgagggtg tggagatcgg cggcgaccac gtcgccgcgg ccggcggccg gacccgacag
     2761 ggtcgtcagc cgccgcaggc cgccgcccat ggcctgccag gcggccaccg ccgcccgttg
     2821 gaggccccgc cacacctggt cgaacgacag tcgcaggagg atcaggcagc cgacgaaggc
     2881 cagcgcgccg aggatgagcc cggcgcccca ggggccggcc agcgaccgca gcggatgccc
     2941 gacggcggca ccgacgaccc cgccggcccg ccgccagcca cggagcccgt tgccgacctg
     3001 cgaagccggg cggagaagat ggagcaggcc ggagaaccc
//
LOCUS       DATGJT010000361         3696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_360244, whole genome shotgun sequence.
ACCESSION   DATGJT010000361 DATGJT010000000
VERSION     DATGJT010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3696
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360244"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VKX24_06170"
     CDS             complement(<1..547)
                     /locus_tag="VKX24_06170"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HLJ08103.1"
                     /translation="MNELELQIIVGSTRPGRAADRFLPWLRDRAERHGRFSVRWLDLR
                     DWDLPFFQETTEDMLSGRFTTPTVRRWNEVVAAGDAYLFVFPEYNHSVPAVLKNAFDH
                     ALGARLRNKPAGFVAYSGGPIAGARAVEHMVGITVEREMAPLRNAVLLGGVGRGFDDD
                     GLPVDPGTEHALAILLDDLAWW"
     gene            616..909
                     /locus_tag="VKX24_06175"
     CDS             616..909
                     /locus_tag="VKX24_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005448361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UBP-type zinc finger domain-containing protein"
                     /protein_id="HLJ08104.1"
                     /translation="MADTCTHLDTVADVSPSDDGCHECLQTGGWWVHLRMCQSCGHIG
                     CCDNSPSRHATAHYHSTSHPLIRSFEPGEDWWWCYPDDLFFEVEGAAPSPSHS"
     gene            940..2220
                     /locus_tag="VKX24_06180"
     CDS             940..2220
                     /locus_tag="VKX24_06180"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ08105.1"
                     /translation="MGKQSRRKRERSPAEARTERYLSRAGLPDRPDPGRWRRLVAAEP
                     DWFRRIREADEATMALTRRGDVLLSEDGRAELLAADRARYGLVYRDLDTALAEYAARP
                     VMIAAAWLRWWFEHRPPAGRLLDVGCGPGVLTCAYALALPEAEVVGIDAVPEAVACAG
                     ELAKRLGAGNASFVVGDAADPATGGGGFDQLVAVTALADAGLYPYDPPEARRALSSMA
                     DVDGPGLRFRSPGVDALVGRLAAGGSLLAFDRTPDVSQAVRFGAALLHAGVELDLRRA
                     GVELFVEDDQPTTFTRFVGRRPEGTIEAAPARPPAGGPAAGGPALAAWLKRVRPPAYG
                     PEWHDELHFEALKSAGARLVWGCEIDYSPRTAALERREIWEDGDGAAWGWIATTPRHR
                     ELVAGRAADELIREYHTLAARLAAAGLAVRYYDE"
     gene            complement(2227..2700)
                     /locus_tag="VKX24_06185"
     CDS             complement(2227..2700)
                     /locus_tag="VKX24_06185"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HLJ08106.1"
                     /translation="MHIAGERSIEVAAPPEAVWGLVADVTRMGQWSPHTVRARWEAPG
                     ADGPAVGRRFLGTNRLPIVRQWTSLATVTACEPGRRFAFAVGRDSADPNTVWSYDFEP
                     VAGGRTRVTERWEMLREPGIVLAYYRLIGQPGRLARGVEETLRRLKAAAEGTTAA"
     gene            complement(2909..>3696)
                     /locus_tag="VKX24_06190"
     CDS             complement(2909..>3696)
                     /locus_tag="VKX24_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08107.1"
                     /translation="AIPAFGSVVPGAVPALGPGPKAGLPLVPGLPLVPGLPLVPVPGA
                     PLAPGVEFGPVPEPGLAGCPLAPPDPLCLAAAVANGETVPPPAAGADCGGAPKPPKAD
                     GAVVVVVETSPGQDVDPEPGAHCAAVVVVVVVVPFLPALGFGHFAVGGVGAEPVVGAV
                     VVLVEEPDRPLGFLAVVAVVADGAAAGCNSVWGTAELPATAGVNPATAAAAKVTAAIP
                     SRPMLMRDIGTSLFQDGGRSAGPDVRCTGGDGHATGHGSGVLR"
BASE COUNT          490 a         1411 c         1336 g          459 t
ORIGIN      
        1 cccaccaggc gaggtcgtcg agcaggatgg ccagggcgtg ctcggtgccg gggtcgacgg
       61 ggaggccgtc gtcgtcgaag ccccggccga ccccgccgag gaggacggcg ttgcgcagcg
      121 gcgccatctc ccgttccacc gtgatgccga ccatgtgctc cacggcgcgg gcgccggcga
      181 tggggccgcc gctgtaggcc acgaacccgg ccggcttgtt ccgcagccgg gcgccgaggg
      241 cgtggtcgaa ggcgttcttc agcacggcgg ggacgctgtg gttgtactcc gggaacacga
      301 acaggtaggc gtcgccggcg gcgacgacct cgttccagcg ccgcaccgtc ggcgtggtga
      361 accggccgga cagcatgtcc tcggtcgtct cctggaagaa cggcaggtcc cagtcccgca
      421 ggtcgagcca ccgcaccgag aaccggccgt ggcgctcggc ccggtcccgc agccagggca
      481 ggaagcggtc ggcggcccgc cccggccggg tgctgccgac gatgatctgg agctccagtt
      541 cgttcatgat ccgacggtaa gacctcaagt tcgcttcagg tcaagccggc tggcggcccc
      601 ttatgatcgc cgctcatggc cgacacctgt acgcacctcg acaccgtggc cgacgtttcc
      661 ccgagcgacg acggatgcca cgaatgcctc cagaccggcg gctggtgggt gcatctccgg
      721 atgtgccagt cgtgcggcca catcggctgc tgcgacaact cgccctcccg ccacgcgacg
      781 gcccactacc actcgacgag ccacccgctg atccgctcct tcgagccggg ggaggactgg
      841 tggtggtgct accccgacga cctgttcttc gaggtcgagg gggccgcacc gtccccgtcc
      901 cactcgtgac cgggcgccgg cgccgccggt aggcgccgga tggggaagca gtcccggcgc
      961 aagcgcgaac gctcgccggc cgaggcccgc accgagcggt acctcagccg ggccggattg
     1021 cccgaccgtc ccgaccccgg ccgctggcgc cggctggtgg ccgccgaacc ggactggttc
     1081 cgccggatcc gggaggccga cgaggcgacc atggcgctga cccggcgagg cgacgtgctg
     1141 ctctcggagg acgggcgggc ggagctcctg gccgccgacc gggcccgcta cggtctcgtc
     1201 taccgggatc tcgacacggc gctggcggag tacgccgccc ggccggtgat gatcgccgcc
     1261 gcctggctgc gctggtggtt cgagcaccgc ccgccggccg ggcggctgct ggacgtcggc
     1321 tgcgggcccg gggttctcac ctgcgcctac gccctggcgc tgcccgaggc ggaggtggtg
     1381 gggatcgacg ccgtgcccga ggccgtggcc tgcgccgggg agctggccaa gcggctgggc
     1441 gccggcaacg cgtcgttcgt cgtcggcgac gccgccgacc cggccacggg cggcggcggc
     1501 ttcgaccagc tggtggccgt gaccgccctg gccgacgccg gcctctaccc ctacgacccg
     1561 cccgaggccc gccgggcgct gtcgtcgatg gccgatgtcg acggcccggg gctgcggttc
     1621 cgctcgcccg gcgtcgatgc gctggtcggg cgcctggcgg cgggagggtc gctgctggcc
     1681 ttcgaccgca cgcccgacgt gtcgcaggcg gtgcggttcg gagcggctct gctccacgcc
     1741 ggcgtcgagc tcgacctccg ccgggccggc gtcgagctgt tcgtcgagga cgaccagccg
     1801 acgacgttca cccggttcgt gggccggcgg ccggagggga cgatcgaggc agcgccggcc
     1861 cgcccgcccg ccggcggccc ggcggccgga ggcccggcgc tggccgcctg gctcaagcgg
     1921 gtgcggccgc ccgcctacgg gccggagtgg cacgacgagc tccacttcga ggcgctcaag
     1981 tcggccggcg cccggctcgt gtggggctgc gagatcgact actcgccccg tacggcggcg
     2041 ctcgagcgcc gggagatctg ggaggacggc gacggcgccg cctggggctg gatcgccacc
     2101 accccccggc accgggagct cgtcgccggc cgggcggccg acgagctcat ccgggagtac
     2161 cacacgctgg ccgcccggct ggccgccgcc ggcctcgccg tccgctacta cgacgagtga
     2221 cgccgctcac gccgccgtcg tgccctcggc cgccgccttg agtcggcgga gcgtctcctc
     2281 caccccccgg gccaggcggc cgggctggcc gatcagccgg tagtaggcga gcacgatccc
     2341 cggctctcgg agcatctccc agcgttcggt gacccgcgtc cgcccgcccg ccaccggctc
     2401 gaagtcgtag ctccagacgg tgttggggtc ggcgctgtcc cggccgacgg cgaaggcgaa
     2461 gcgccggccg ggctcgcaag cggtgacggt ggcgaggctc gtccactgcc ggacgatcgg
     2521 cagccggttg gtgccgagga agcgccggcc gacggccggc ccgtccgccc cgggcgcctc
     2581 ccaccgggcc cgcaccgtgt ggggactcca ctggcccatg cgggtgacgt cggccaccag
     2641 cccccacacc gcctccggcg gagcggcgac ctcgatgctc cgctccccgg cgatgtgcac
     2701 ggcccgatga tgccaccgcc gttctcctgt cagcgcccag ccacgccgtc ccccgacccg
     2761 ttggtggcct tttggagggt gtgacgcacc gccagggtgc gtcacacgct ccaaaagctg
     2821 acggagacga acaacgcagc gacattctgc ggaacctttt acgccctctt gaggtaattc
     2881 gtgccgagtt gggcaggaag tccctttttc agcggagaac cccagaaccg tgccctgtgg
     2941 cgtgcccatc gccgccggtg caccggacat ccggtccggc gctccgtccc ccgtcctgga
     3001 acagggaggt tccgatgtca cgcatcaaca tcggacgact gggaatagca gcggtgacct
     3061 tcgccgccgc cgcggtcgcc gggttcacgc cggcggtggc gggaagctca gccgtccccc
     3121 ataccgagtt gcatcccgcc gcggcaccgt ccgccacgac cgccaccacg gccaagaaac
     3181 cgaggggccg gtcgggctcc tcgacgagca cgaccacggc cccgacgacg ggctcggcgc
     3241 cgacaccccc gacggcgaag tgcccgaagc ccaaggccgg caagaagggc acgacgacga
     3301 cgacgaccac gacggcggcg cagtgcgccc ccggttcggg gtcgacgtcc tgtcccggtg
     3361 acgtctccac caccacgacc acggcaccgt cagccttcgg aggcttcggg gcgccgccgc
     3421 agtcagcgcc cgcggccggc ggcgggaccg tctcgccgtt cgccaccgcc gccgccaagc
     3481 acagcggatc gggcggtgcc aaggggcagc cggccagtcc cggctcgggc accggcccga
     3541 actccacacc gggcgccaac ggagcgccgg gtaccggcac caacgggagc ccgggcacca
     3601 acggaagtcc gggcaccaac ggaagcccgg ccttcggacc cggccccaac gccgggacgg
     3661 cgcccgggac caccgacccg aacgccggaa tggcgc
//
LOCUS       DATGJT010000362         2715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1498763, whole genome shotgun sequence.
ACCESSION   DATGJT010000362 DATGJT010000000
VERSION     DATGJT010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498763"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VKX24_06195"
     CDS             complement(<1..398)
                     /locus_tag="VKX24_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017775606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HLJ08108.1"
                     /translation="MSTAATIDYAEKIPNNVDLASDRRLQRALESWQPKFLQWWRDLG
                     PVAFQDHDVYLRTAISTDQEGWANFDFVKMPDYRWGIFLAPQEADRTIAFGDHMGEAV
                     WQDVPGEYRADLRRLIVVQGDTEPASVEQQR"
     gene            complement(403..2109)
                     /gene="boxC"
                     /locus_tag="VKX24_06200"
     CDS             complement(403..2109)
                     /gene="boxC"
                     /locus_tag="VKX24_06200"
                     /EC_number="4.1.2.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019876762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-epoxybenzoyl-CoA dihydrolase"
                     /protein_id="HLJ08109.1"
                     /translation="MTNDQGGGMVSNERNERPVTFDRHPSTYRHWTLEIEPPLARLTM
                     AVDPDGGLNEGYQLKLNSYDLGVDIELYDAVQRLRFEHPEVRAVVVTGGLDKMFCAGA
                     NIQMLAGASHHHKVNFCKFTNETRNSIEDASGASQQVWLAAVNGTAAGGGYELALACD
                     DILLVDDRSSAVSLPEVPLLGVLPGTGGLTRVVDKRHVRRDLADVFATRTEGVRGVQA
                     VEWGLVDAVAPRTRFDEEARSRALARAESSDRPAGARGVELTPLERTVDGSVIRYPNL
                     EVRLDRELGAAWFTVAGPSGAVPPSTEAITEAGAAFWPLALCRELDDALLHLRFNEPE
                     IGTWVLQTKGDAAAVLAYDDVLREHAGHWLVREIRLYWRRTLKRLDLSARTLVALVTP
                     GSCFAGTLAELVLAADRSFMLEGVFEDADDDLPPAELVLTDANDGWYAMSNGLTRLQS
                     RFFGHDEALEAVRASLGKHLLAAEAAGLGLVTFTPDDIDWEDEIRLCLEERASFSPDA
                     LTGLEANYRFVGPETLETKIFGRLTAWQNWIFQRPNASGPDGALRRYGTGSRPSYDRK
                     RV"
     gene            2183..>2715
                     /locus_tag="VKX24_06205"
     CDS             2183..>2715
                     /locus_tag="VKX24_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016432107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaX family transcriptional regulator"
                     /protein_id="HLJ08110.1"
                     /translation="MTEAVPSEQWARRSQALGVPSTRGYLLTVLGEFVLPVGGRVWTA
                     ALLDALGALGVEERTARQAVWRSAERGLLESERIGRRTRWALSDAARRLLAEGTRRIY
                     SLHREPRPWDGRWLLLFVSVPESQRDLRHRMRTRLGWAGFASIGSGTWVSPWVDREVE
                     AKEVLEDLNLGGAARSFV"
BASE COUNT          357 a          965 c          983 g          410 t
ORIGIN      
        1 cgctgctgct cgaccgaggc cggctccgtg tcgccctgca ccacgatcag gcggcggagg
       61 tcggcccggt actcgcccgg tacgtcctgc cagaccgcct cgcccatgtg gtcgccgaag
      121 gcgatcgtgc ggtcggcctc ctgcggcgcg aggaagatcc cccagcggta gtcgggcatc
      181 ttcacgaagt cgaagttggc ccatccctcc tggtcggtcg agatggccgt ccggaggtag
      241 acgtcgtggt cctggaaggc caccgggccg aggtctctcc accactggag aaacttcggc
      301 tgccacgact ccagcgcccg ctgcagccgc cggtccgacg ccaggtcgac gttgttgggg
      361 atcttctctg cgtagtcgat cgttgccgcg gtactcatgg gatcagaccc tctttcggtc
      421 gtaggacggg cgcgatccgg tgccgtagcg gcggagcgcg ccgtcggggc ccgaggcgtt
      481 gggacgctgg aagatccagt tctgccaggc ggtcagccgg ccgaagatct tggtttcgag
      541 cgtctcgggc ccgacgaaac ggtagttggc ctcgaggccg gtgagggcgt cgggcgagaa
      601 cgacgcccgc tcctcgaggc agaggcggat ctcgtcctcc cagtcgatgt cgtcgggcgt
      661 gaaggtcacg agcccgaggc cggccgcctc ggcggccagg aggtgcttgc cgagcgacgc
      721 ccggacggcc tccagcgcct cgtcgtggcc gaagaaccgg ctctgcagcc gggtgaggcc
      781 gttggacatg gcgtaccagc cgtcattggc gtcggtgagg accagctcgg cgggcgggag
      841 gtcgtcgtcg gcgtcctcga agacgccttc gagcatgaac gaccggtcgg cggccagcac
      901 gagctcggcc agggtgccgg cgaagcagct gcccggcgtg accagcgcca ccagcgtgcg
      961 ggccgacagg tcgaggcgct tcagcgtgcg gcgccagtag agccggatct cccgcaccag
     1021 ccagtggccg gcgtgctccc ggaggacgtc gtcgtaggcc agcaccgccg ccgcgtcgcc
     1081 cttcgtctgc aggacccagg tgccgatctc gggctcgttg aagcgcaggt ggagcagggc
     1141 gtcgtcgagt tcccggcaca gggccagagg ccagaacgcc gcccccgcct cggtgatcgc
     1201 ctccgtcgag ggcgggaccg cgccggacgg gccggccacc gtgaaccacg ccgccccgag
     1261 ctcccggtcg aggcggacct cgaggttggg gtagcggatc acggaaccgt cgaccgtccg
     1321 ctcgagcggc gtcagctcga cgccccgggc gccggccggc cggtcggagg actccgcccg
     1381 ggccagcgcc cggctccggg cctcctcgtc gaaccgggtg cggggagcga cggcgtcgac
     1441 caggccccac tccaccgcct ggacgccccg cacgccctcg gtgcgggtgg cgaagacgtc
     1501 ggccaggtcg cgccggacgt ggcgcttgtc gacgacccgg gtcagcccgc ccgtccccgg
     1561 cagcacgccg aggagcggga cctcgggcag cgagaccgcc gaggagcggt cgtcgaccag
     1621 caggatgtcg tcgcaggcca gcgccagctc gtagccgccg ccggcggccg tgccgttgac
     1681 cgccgccagc cacacctgtt gcgacgcccc gctggcgtct tcgatggagt tgcgggtctc
     1741 gttggtgaac ttgcagaagt tcaccttgtg gtggtggctg gccccggcca gcatctggat
     1801 gttggccccg gcgcagaaca tcttgtcgag cccgccggtc accacgaccg cccgcacctc
     1861 ggggtgctcg aaccggagcc gctgaaccgc gtcgtacagc tcgatgtcga cgcccaggtc
     1921 gtaggagttc agcttgagct ggtagccctc gttgaggccc ccgtcggggt cgacggccat
     1981 ggtgagccgg gccagcggcg gctcgatctc cagcgtccag tgccggtacg tcgagggatg
     2041 ccggtcgaag gtcacgggcc gctcgttgcg ctcgtttgac accatgccgc ccccctggtc
     2101 gttcgtcatc ttaacatcct acattcacgt ctcgctacgt caagatactg tagaacattg
     2161 cattgcgtgc cattctcgga gcgtgaccga ggccgtcccc agcgagcagt gggcccgacg
     2221 cagccaggcg ctcggggtgc cgtcgacccg cggctacctg ctgaccgtcc tcggcgagtt
     2281 cgttctgccg gtcggcggcc gggtgtggac ggcggccctg ctcgacgccc tcggcgccct
     2341 cggcgtcgag gagcgaaccg cccgccaggc ggtgtggcgc tcggccgagc gggggctgct
     2401 cgagtcggag cggatcggcc ggcgcacccg ctgggcgctg tccgacgccg cccgccggct
     2461 cctggccgag ggcacccggc gcatctactc cctccaccgg gagccccgtc cctgggacgg
     2521 ccggtggctg ctgctgttcg tctcggtccc cgagtcgcag cgcgacctgc gccaccggat
     2581 gcgcacccgg ctcggctggg cgggcttcgc ctcgatcggg tcgggcacct gggtcagccc
     2641 ctgggtcgat cgcgaggtgg aggccaagga ggtcctcgag gacctcaacc tcggcggcgc
     2701 cgcccgctcg ttcgt
//
LOCUS       DATGJT010000363         2576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_152464, whole genome shotgun sequence.
ACCESSION   DATGJT010000363 DATGJT010000000
VERSION     DATGJT010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152464"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..1770)
                     /locus_tag="VKX24_06210"
     CDS             complement(151..1770)
                     /locus_tag="VKX24_06210"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014384124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ08111.1"
                     /translation="MESNDSYDVIVIGAGFAGLYAVHLLREAGFGVRALERGDGVGGT
                     WFWNRYPGARCDVQSIEYSYSFSKEIQDEWEWTELMPAQPEIEAYLNFVADKLDLRRD
                     VQLSTTVTALTYDEGEDRWRVETDGGQQFLARWVIAATGCLSQPLEPAIAGLETFAGA
                     TLYTNRYPKEGFDFSGHRVGVVGTGSSGVQSIPIIAEQAEHLFVFQRSAAYSRPADNR
                     PLRPGELDAVKADYEALRVKERNAYAGLVAFGAVSFEGMTPPDRRILETPMQERLAVL
                     DELGWGAPGAWADVMFDLEANRAGAELYGELLKRVVKDPETAASLVPHYPMGCKRQIL
                     DTGYFETFNRDNVTLIDLRRDPIVEVSADGVRTKERFCELDVLVLATGFDAMTGALNN
                     MDIAGRGGRRLRDVWASEGPVSYLGLQVAGFPNLFTVTGPGSPSVLTNMVVSIEQHVE
                     WIADCLVHLRSHGLRSIEAEPEAQAAWVDHAASLVQGTIRNSEGCNSWYVGANVPGKT
                     RIHMPYIGGLPAYRAKCEEVAGAGYAGFTLR"
     gene            1835..2281
                     /locus_tag="VKX24_06215"
     CDS             1835..2281
                     /locus_tag="VKX24_06215"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ08112.1"
                     /translation="MADTERLEAVEVATVRPLRSEVLRRGGPPEASVLPFDEDPRSRH
                     LALLVDGEVVAVGSVLPEPPPWSPDRRDAWRVRGMATKEGLRSLGHGEKVLRGLIDYA
                     ASAGGRIVWCDARLAAVPFYGRQGFGATGGVFVKEGVDHLAMWREL"
BASE COUNT          334 a          905 c          963 g          374 t
ORIGIN      
        1 gccagccgca cccgggccca ggagttcggc gagatcgccc gtcgcgacgg cctgcgggcc
       61 gccatcgagt ggcgggacgc gccgttccgc caggaggggt tcaacccctg agcggggtcg
      121 cgcaccgcct cgggcggcgg cgcgtcgggg tcagcgcagc gtgaaccccg cgtagccggc
      181 cccggccacc tcctcgcact tggcgcggta ggcggggagc ccgccgatgt acggcatgtg
      241 gatccgggtc ttcccgggca cgttcgcgcc cacgtaccag gagttgcacc cttccgagtt
      301 gcggatggtg ccctgcacga gcgaggcggc gtggtcgacc catgcggcct gggcctccgg
      361 ctcggcctcg atcgagcgga gcccgtggct gcggaggtgg acgaggcagt cggcgatcca
      421 ctcgacgtgc tgctcgatgg acacgaccat gttggtgagg accgacgggc tgcccgggcc
      481 ggtcaccgtg aacaggttgg ggaagccggc cacctggagc ccgaggtagc tcacgggacc
      541 ctccgacgcc cacacgtcgc gtagccggcg gccgccacgg cccgcgatgt ccatgttgtt
      601 gagggcgccg gtcatggcgt cgaacccggt cgcgagcacg agcacgtcga gctcgcagaa
      661 ccgctccttc gtccgcacgc cgtcggcgct gacctccacg atcgggtccc ggcggaggtc
      721 gatcagggtc acgttgtcgc ggttgaacgt ctcgaagtac ccggtgtcga ggatctggcg
      781 cttgcacccc atcgggtagt ggggcacgag ggacgccgcc gtctcggggt ccttcaccac
      841 ccgcttgagc agctccccgt agagctcggc gccggcccgg ttggcctcga ggtcgaacat
      901 gacgtcggcc cacgcgccgg gtgcgcccca gccgagctcg tcgagcaccg ccaggcgctc
      961 ctgcatcggg gtctcgagga tgcgccggtc gggcggcgtc atcccctcga aggagacggc
     1021 gccgaacgcc accaggcccg cataggcgtt gcgctccttg acccgcagcg cctcgtagtc
     1081 cgccttgacc gcgtcgagct cgcccgggcg cagcggccgg ttgtcggccg gacggctgta
     1141 ggcggcagac cgctggaaga cgaacaggtg ctccgcctgc tcggcgatga tcgggatcga
     1201 ctgcaccccg gaggagccgg tgccgacgac acccacccgg tgcccggaga agtcgaagcc
     1261 ctccttcggg tagcggttgg tgtagagggt ggccccggcg aaggtctcga gaccggcgat
     1321 ggcgggttcc aggggctggg agagacagcc ggtggcggcg atcacccagc gggcgaggaa
     1381 ctgttggccg ccgtcggtct cgaccctcca gcggtcctcg ccctcgtcgt aggtgagggc
     1441 ggtcaccgtc gtcgacagct ggacgtcccg gcggaggtcc agcttgtcgg cgacgaagtt
     1501 caggtaggcc tcgatctcgg gctgggccgg catgagctcg gtccactccc actcgtcctg
     1561 gatctccttg ctgaagctgt aggagtactc gatgctctgg acgtcgcagc gggcgccggg
     1621 gtagcggttc cagaaccagg tgcccccgac cccgtcgccc cgctcgaggg cccggacgcc
     1681 gaaccccgcc tcccgcagca ggtgcacggc gtacaggccg gcgaagccgg cgccgatcac
     1741 gatgacgtcg tagctgtcgt tcgactccac ggtcgggagc ctattgcgcg gcgcctcggg
     1801 ctcctttgtc ggcgggcgcg tcctaccctg tgggatggcc gacaccgagc ggctggaggc
     1861 ggtggaggtg gccaccgtgc ggccgctgcg cagcgaggtg ctccgccggg gcgggccacc
     1921 cgaggcgagc gtgctgccct tcgacgagga cccccggtcc cggcacctgg cgctcctcgt
     1981 cgacggcgag gtggtggccg tgggcagcgt cctccccgag ccgccgccgt ggtcgcccga
     2041 ccgccgagac gcctggcggg tgcgcgggat ggcgacgaag gagggcctgc gctccttggg
     2101 ccacggggag aaggtgctgc gcggcctcat cgactacgcg gcatcggccg gggggaggat
     2161 cgtctggtgc gacgcgcggc tggccgccgt ccccttctac gggcgccagg gcttcggcgc
     2221 gaccggaggg gtcttcgtga aggagggcgt cgaccacctg gcgatgtggc gcgagctgta
     2281 gccgagggcc cgccggtccg acccggcaag gccgatccgg gcccaggtcc ggcgcctgcc
     2341 ggaccccgcc gggaccggcc cgggcgccgg cgccggcgcc gatggcgccc ctgtcccatc
     2401 cacgcggcag aatgcctgtt gatggcggtg tacctcgtga cactgagcca ccttcggggt
     2461 gaggcagcag tggggctcgg cctggccgcc ctcgtcgtcc tgctcggcat cttcgtctac
     2521 gtccgcaacg acgccaaggc ggtcgcgccc gcaccgtcgg ggagtatcgg ctggtc
//
LOCUS       DATGJT010000364         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1085675, whole genome shotgun sequence.
ACCESSION   DATGJT010000364 DATGJT010000000
VERSION     DATGJT010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085675"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..804
                     /locus_tag="VKX24_06220"
     CDS             157..804
                     /locus_tag="VKX24_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08113.1"
                     /translation="MNQLCPRCGALFEPDVSMEFARTRVPCRDCGLALEDPPAMLAPS
                     GDDGDQIAYELVEWPAEDRVIATDDLVELDIPYRWEDGLVLIVPADFEGQVDALLDEI
                     DENAASDGDVLLDVDVGEDGGEEATAAMGDLFVAADALHHARYDDEKVVEFIEAAAAV
                     ASCLAPYGVEPQVWSRIQNQASAIVAELEKGEEGDDDEDVITAAHNLRELLRHYV"
     gene            complement(820..1311)
                     /locus_tag="VKX24_06225"
     CDS             complement(820..1311)
                     /locus_tag="VKX24_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08114.1"
                     /translation="MAPSALGRYRGEIDTAPELDAFVAAFGEWVEACWFAEDDRARAW
                     LEKVVAFPPDVVLVGALSTLRRLLELSDPRGLAPALGNAGDVGGALAEHLLITGPDPG
                     REALIRAVVTAAGSGPQVRREVLAAYGPEAVGGAALECSSVLTQALANRWGVVPTNIL
                     EDF"
     gene            1354..1857
                     /locus_tag="VKX24_06230"
     CDS             1354..1857
                     /locus_tag="VKX24_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010693820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08115.1"
                     /translation="MDLGIYVEGLQRQVAVAAEAGGDEARAVAERLTVPLEAAIRLTL
                     QDALTAAAEEITCDLAPGSVEIRLRGRELQFAVTAPPGESPPPDAGDGADVGVDAEEG
                     ATARINLRLPDHLKARIEQAAGREGLSVNTWLVRAAAAALGRADPDRRRPARPVQGTQ
                     RYTGWAR"
     gene            1915..>2556
                     /locus_tag="VKX24_06235"
     CDS             1915..>2556
                     /locus_tag="VKX24_06235"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HLJ08116.1"
                     /translation="MPAFDTPQPIAVVLELGVGDVHIAASDRTDTTVDVRPSDPGRPA
                     DVAAAEQTRVEYADGVLRVKAPKGWRRSTLRSGRESVDVRIEVPAGSALQGDAALVAL
                     RSTGRLGDCRFSTGAGDIQIEEAGALRLRSAAGDVAVGRAAGPCDVSTSSGAIRLGTV
                     DGALVVKNANGDTAIGDVRGDVRVSAANGRITVGRAGRTVALKTAYGDIRLGEV"
BASE COUNT          355 a          978 c          926 g          297 t
ORIGIN      
        1 cggccgggcc tccgagcgcc acgcctggct cgtcgaggcg ctggatctgc cacgctgtgc
       61 cccggggtgg ggctaccgct acctcacctc gttccccgac aacttcgacg gcggcccgct
      121 cacaccggtc ggcggcacca gccccgagga ggcgacgtga accagctctg tccccgctgc
      181 ggcgccctgt tcgaacccga cgtgagcatg gagttcgcca ggacccgggt gccctgccgg
      241 gactgcgggc tggccctcga ggacccgccg gcgatgctgg cgccgtcggg cgacgacggc
      301 gatcagatcg cctacgagct ggtggagtgg ccggccgagg accgggtcat cgccaccgac
      361 gacctggtcg agctcgacat cccctaccgc tgggaggacg ggctggtcct catcgtgccg
      421 gcggacttcg aggggcaggt cgacgccctc ctcgacgaga tcgacgaaaa cgccgcctcc
      481 gacggcgacg tcctcctcga cgtcgacgtc ggcgaggacg gtggcgagga ggcgacggcg
      541 gccatgggcg acctcttcgt cgccgccgac gccctccacc acgcccgcta cgacgacgag
      601 aaggtcgtgg agttcatcga ggccgccgcc gccgtcgcct cctgcctcgc cccctacggc
      661 gtcgagccgc aggtctggag ccggatccag aaccaggcgt cggccatcgt cgccgagctg
      721 gagaaggggg aggagggcga cgacgacgag gacgtcatca ccgccgccca caacctgcgg
      781 gagctgctgc ggcactacgt gtagcccggt gacgtccggt cagaagtcct cgaggatgtt
      841 cgtcggaacc acgccccagc ggttcgccag cgcctgggtg aggaccgacg agcactccag
      901 cgccgctccc ccgacggcct ccggtccgta ggcggcgagg acctcccgcc ggacctgcgg
      961 gccgctcccg gccgcggtca ccaccgcccg gatcagggcc tcccggcccg ggtcgggccc
     1021 ggtgatcaga aggtgctcgg ccagggcgcc gccgacgtcg ccggcgttgc ccagcgccgg
     1081 ggccaggccc cgggggtcgg acagctccag cagccggcgg agggtgctca gcgccccgac
     1141 gaggacgacg tcgggcggga aggccaccac cttctccagc caggcccggg cccggtcgtc
     1201 ctcggcgaac cagcacgcct cgacccactc gccgaaggcg gcgacgaagg cgtcgagttc
     1261 gggtgccgtg tcgatctctc cacggtaccg cccgagggcc gaaggcgcca tggtggcatt
     1321 gacatggcac cactttggca tcatcatggt gccatggatc tgggaatcta cgtcgagggc
     1381 ctccagcgcc aggtggcggt ggccgccgag gccggcggcg acgaggcgcg ggcggtggcc
     1441 gagcgcctca ccgtcccgct ggaggcggcg atccgcctca cgctgcagga cgcgctgacc
     1501 gccgcggccg aggagatcac ctgcgacctg gcgcccggct cggtcgagat ccgcctccgg
     1561 gggcgggagc tgcagttcgc cgtgaccgcc ccgccgggcg agtccccgcc ccccgacgcc
     1621 ggcgacgggg ccgacgtcgg cgtcgacgcc gaggagggag ccacggcccg gatcaacctc
     1681 cgtctgcccg accacctcaa ggcccgcatc gagcaggccg ccggccggga gggcctctcg
     1741 gtcaacacct ggctggtgcg ggcggccgcc gccgccctcg gccgggccga ccccgaccgc
     1801 cgccggccgg cccgtccggt gcagggaacg cagcgttaca ccggctgggc ccgctagccc
     1861 ggcccgccag tccgtccgac cttccaagcc tcgacacgaa gagagggacc tgccatgccc
     1921 gcgttcgaca cgccccaacc gatcgccgtc gtgctggaac tcggcgtcgg cgacgtccac
     1981 atcgccgcct ccgaccgcac cgacaccacc gtcgacgtcc gcccgagcga cccgggccgg
     2041 ccggccgacg tcgccgccgc cgagcagacc agggtggagt acgccgacgg cgtcctccgg
     2101 gtgaaggcgc ccaaaggctg gcggcgctcc acgttgcgga gcggccggga gtcggtcgac
     2161 gtccgcatcg aggtgccggc cgggtccgcg ctgcaaggcg acgcggccct ggtggcactg
     2221 cgctccaccg gccggctcgg cgactgccgc ttctcgaccg gcgccggaga catccagatc
     2281 gaagaggccg gcgcgctgcg gctgcgcagc gccgccggcg acgtcgccgt cggacgggcg
     2341 gccggcccct gcgacgtgag cacgtcctcg ggggcgatcc ggctcgggac cgtcgacggc
     2401 gccctggtgg tcaagaacgc caacggtgac accgccatcg gcgacgtccg cggcgacgtc
     2461 cgggtgagcg cggccaacgg gcggatcacc gtcggccggg cgggccggac ggtggcgctc
     2521 aagaccgcct acggcgacat ccgcctcggc gaggtc
//
LOCUS       DATGJT010000365         5029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_152557, whole genome shotgun sequence.
ACCESSION   DATGJT010000365 DATGJT010000000
VERSION     DATGJT010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5029
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152557"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..1163)
                     /locus_tag="VKX24_06240"
     CDS             complement(30..1163)
                     /locus_tag="VKX24_06240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08117.1"
                     /translation="MSLLPTPTALLGAVGDDAHIDDQLYLRARLVDLCFNRAFDSDAA
                     GVWHAPGPLLILGGRAQGPSLSLATHWRAMVAARPREDRTVHIHLLGSGDETAVLGLD
                     DPAADGEAPAEAVALATIVRTLARRGHPVGGVDLLRATDVPTGVGLGIDAAVRAATAR
                     AVCGLAGARSGSVELVAALDEACGDDADHQVCLTAPEGYAALARPGPSGSGVTPQRPP
                     PCVRFDPAQHGFRLMLVTLRVAPGTPPPTAWEASDAEDAIAAEGFRLLTAGGGHPGAG
                     TLPAQLGALLDRSHAATSAQREPAATDRVVDAAREAGALGARALSPRAVLAAVRTPDL
                     ATVRSAVLAACAGAAETSLGARFLTTAGLAGAGQGAGSIDGLP"
     gene            complement(1160..3046)
                     /locus_tag="VKX24_06245"
     CDS             complement(1160..3046)
                     /locus_tag="VKX24_06245"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ08118.1"
                     /translation="MSGLGFAFGDPLAWLPPVAIITLALNGLRLRGRATRLRAVPPGG
                     GPALRPEEQDPAAAWEWLTAAGVDLPAATRRALTAHATANGLQVLDVIPSDLALDAAL
                     GLLRMVDPVTYRTAPLEAGWGAGQAVAVARDTLQRAEVKPAEALDPAAVLTDTVALKK
                     FAPLATDLVTVPGLVAGDPGSPRARRLALGIPASFSLPGPLIGYAVLAVGALANPVWG
                     LISLGAFTLQPYLVFAGTPLRPRDLHRSSLLRVVRDPIQWVRSAWGRPGPVAAAESAR
                     KQAHIDDARPGYAADIAAGVDRFLEPRRADCPWCGAGALATIVRTPDLHQGKPGRFRL
                     DRCRSCGHVFQNPRLTIAGLDFYYRDFYDGAGDAQLEAAFGAQAKVYRNRAETLRGHA
                     QSPGSWLDVGTGHGHFCLVASGDWPGTTFDGLDMTDGIDEAARRGWVHRGYRGMFPEL
                     APDLAGRYDVVSMFHYLEHTREPAQELDAAAAVLKPGGHLLIEVPDPEWPMGRVLRRF
                     WMPWLQPQHQHLIPIGNLKKALAERGLTVLAERRDMAAVPPDLIAAVYLLLHRLTTDP
                     NTPWRRSPPGPGRQLLRGLGLIVAVPLAILAAVLNPVFAIPLRRSGRTTAYRVVARRE
                     PAAP"
     gene            complement(3043..4254)
                     /locus_tag="VKX24_06250"
     CDS             complement(3043..4254)
                     /locus_tag="VKX24_06250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013226447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ08119.1"
                     /translation="MSRFLFVVPPLAGHVNPTVAVGRELERRGHTVAWAGHPEAVGAL
                     LPGPPAAPCRLLPAGTGLSTADLEAMRARWLGLRGFAALKALWEEVLLPIGAAMRDGV
                     EAAVDGFGPDVVVADQQAIAGAAVAWRRGLPWATSASTFSELARPYAAMPAVEGWVTQ
                     QLRDFAVGSGIGAAEAGRGDLRFSDRLVLVFTTPELAGPIEVPCSPVFVGPAIGERPA
                     QPDFPWDWLDAPGAGERRSRVLVSLGTHNGEAGDRFYRVLLDAVATKATSLQLILVAP
                     AGVRAALGELPRNVLAAERVPQLALLDHVDAVVTHGGLGTVSEALSAGRPLVVAPIRD
                     DQPLIAERVESLGAGVRVRFGRVRPGDLSSALESVLTDPAFAAAAAGVGASLAAAGGA
                     PAAADQLEKLA"
     gene            complement(4251..>5029)
                     /locus_tag="VKX24_06255"
     CDS             complement(4251..>5029)
                     /locus_tag="VKX24_06255"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ08120.1"
                     /translation="LAPPTGRPPSVVFIHGLFIDNLSSLYYSLANPVAQAGADAILYD
                     LRGHGRSEQTPAGYTLDDSVEDLLAVVDALGVGAPVHLVGHSYGASVALRAGLRHPER
                     LAGLTLIEPHCADTGDGGSWVEDVADALTAIALCSETLALPADEEVSPSTVRKLRALK
                     TTNAFLNATTMIEDVAASPRFTGKELAGLEVPTMAVYGEQTDLASSLAMIRASMPQCR
                     LEVFPGVGHSVLRDATPKVLALLIDWLAECSDPELEWAAS"
BASE COUNT          657 a         1798 c         2012 g          562 t
ORIGIN      
        1 gtcgttgccg gtcagccggt ggaggcgggt cacgggaggc cgtcgatgct gccggcgccc
       61 tggccggccc cggccagccc ggccgtcgtg aggaaccggg cgccgaggct cgtctccgcc
      121 gctccggcac aggcggcgag gacggcgctg cggaccgtgg cgaggtcggg cgtgcggacc
      181 gctgccagga ccgcccgcgg ggagagcgcc cgggcgccca gggctcccgc ctcccgggcg
      241 gcatcgacca cccggtcggt ggccgccggc tcacgctggg ccgaggtggc ggcgtgggag
      301 cggtcgagca gggcgccgag ttgcgccgga agggtgcccg ccccagggtg ccctccgccg
      361 gcggtcagga gccggaatcc ctcggctgcg atcgcgtcct cggcgtcgct ggcttcccag
      421 gcggtcggtg ggggggtgcc cggcgccacc ctgagcgtca cgagcatcag ccggaacccg
      481 tgctgcgccg gatcgaaccg cacgcaggga ggtgggcgtt gcggggtcac cccgctgccg
      541 gaaggtccgg gtcgggccag ggcggcatag ccctccgggg cggtcaggca aacctggtgg
      601 tcggcgtcgt cgccgcaggc ctcgtcgagg gccgccacca actcgaccga tccggagcgc
      661 gctcccgcca acccgcagac ggcccgggcg gtggccgccc gcacggcggc gtcgatgccc
      721 agcccgaccc cggtgggcac gtcggtggcg cgcaggaggt cgacgccgcc caccgggtgg
      781 ccgcggcggg ccagcgtccg cacgatggtg gcgagtgcca ccgcctccgc cggggcctcg
      841 ccgtcggccg ccgggtcatc caaccccagc accgcggtct cgtccccgga gccgagcagg
      901 tggatgtgca cggtgcgatc ctcccggggc cgggcggcga ccatcgcccg ccaatgggtg
      961 gcgaggctga gcgacggccc ctgcgcccgc ccgccgagga tcaggagcgg gcccggggcg
     1021 tgccacacgc cggccgcatc gctgtcgaag gcccggttga agcagaggtc gaccaggcgg
     1081 gcgcgcaggt agagctgatc gtcgatatgg gcgtcgtcgc cgacggcacc gagcagggcg
     1141 gtgggggtcg ggaggaggct cacggggcgg ccggctccct ccgggcgacg acccggtagg
     1201 cggtggtccg gccgctgcgg cgcagcggga tggcgaacac cgggttcagc accgcggcga
     1261 ggatcgctag cgggacggcg acgatcagcc ccaggccccg cagcagctgg cgcccgggcc
     1321 ccggggggga gcgccgccat ggggtgttcg ggtcggtcgt caggcggtgg agcagcaggt
     1381 agacggcggc gatgagatcg ggcgggaccg cggccatgtc ccgccgctcg gcgaggacgg
     1441 tcaggccccg ttcggccagc gccttcttca ggttgccgat cgggatcagg tgctggtgct
     1501 gcggttgcag ccagggcatc cagaaccggc gcaggacccg gcccatcggc cactccggat
     1561 cggggacctc gatcagcagg tggccgcctg gcttcagcac cgcggccgcg gcgtcgagct
     1621 cctgggccgg ttcccgggtg tgctcgaggt agtggaacat gctgacgacg tcgtagcgcc
     1681 cggccaggtc gggggccagc tccgggaaca tgccccggta gccccggtgt acccagccgc
     1741 ggcgggcggc ctcgtcgatg ccgtcggtca tgtccaggcc gtcgaaggtc gtccccggcc
     1801 agtcgccgga ggccaccagg cagaagtgcc cgtggccggt gccgacgtcc agccaggacc
     1861 cgggcgactg ggcgtggccg cgcagcgtct cggcccggtt gcggtagacc ttggcctggg
     1921 cgccgaacgc cgcctcgagc tgtgcatccc cggcgccgtc gtagaagtcc cggtagtaga
     1981 agtccaggcc ggcgatggtc agccgtgggt tctggaagac gtgcccgcag gaccggcacc
     2041 ggtcgaggcg gaagcggccg ggcttgccct ggtggaggtc cggggtgcgg acgatcgtgg
     2101 ccagcgctcc ggccccgcac cacgggcagt cggcgcggcg gggctcgagg aaccggtcga
     2161 ccccggcggc gatgtcagcg gcgtagccgg gccgggcgtc gtcgatgtgg gcctgcttgc
     2221 gggccgactc ggcggcggcg acgggacccg gccgccccca ggccgagcgc acccactgga
     2281 tcgggtcccg gaccacccgc agcaacgacg agcgatgcag gtcgcggggc cggagcgggg
     2341 tgccggcgaa gacgaggtag ggctgcagcg tgaacgctcc cagcgagatc agcccccaga
     2401 ccgggttggc cagggcgccg accgcgagca cggcgtaccc gatcagcggg cccggcaggg
     2461 agaaggatgc cgggatgccc agggccaggc gccgtgcccg gggcgaaccg gggtcgccgg
     2521 cgaccaggcc cgggacggtg accaggtcgg tggccagcgg ggcgaacttc ttcagggcca
     2581 cggtgtcggt gagcacggcg gctgggtcca aggcctcggc gggcttgacc tccgctcgct
     2641 ggagcgtgtc ccgggcaacc gccaccgcct gccctgcccc ccagcccgcc tccagcgggg
     2701 cagtgcggta ggtcaccggg tcgaccatcc gcagcaggcc gagggcggcg tcgagcgcca
     2761 ggtcgctcgg gatgacgtcg agcacctgga ggccgttggc tgtggcgtgg gcggtgagcg
     2821 cccggcgggt cgcggcgggg agatcgaccc cggccgcagt cagccattcc caagctgccg
     2881 ccgggtcctg ctcctcgggc cggagggcgg gcccgccgcc gggcggcacg gcccggagcc
     2941 tggtcgcccg gccccgaagg cgcaagccgt tgagggcgag ggtgatgatc gccaccggcg
     3001 ggagccacgc cagcgggtcg ccgaaggcga agccgagccc gctcacgcca acttctccag
     3061 ctggtcggcg gcggccgggg cgccgccagc ggcggcgagc gaggccccca ccccggcggc
     3121 ggcggcagcg aaggccgggt cggtgaggac ggactcgagc gcgctcgaca ggtcgcccgg
     3181 ccggacccgg ccgaagcgga cccgcacccc ggcacccagc gactcgaccc gctcggcgat
     3241 cagcggctgg tcgtcgcgga tcggggcgac gaccagtggg cggccggccg acagcgcctc
     3301 cgagacggtg ccgaggccgc cgtgggtgac gacggcgtcg acgtgatcga ggagcgccag
     3361 ttgcgggacc cgctcggcgg ccagcacgtt gcggggcagc tcgcccaggg ccgcccggac
     3421 acccgccggg gcgaccagga tcagctggag cgaggtggcc ttcgtggcga cggcgtcgag
     3481 cagcacccgg tagaaccggt cgccggcttc gccgttgtgg gtcccgagcg acaccagcac
     3541 ccgggagcgc cgctcgccgg ccccaggggc gtcgagccag tcccacggga agtccggttg
     3601 ggcgggccgc tcaccgatcg ccgggcccac gaacacgggg ctgcacggca cctcgatcgg
     3661 cccggccagc tccggggtgg tgaagaccag gaccagccgg tcggagaagc gcaggtcgcc
     3721 ccgcccggcc tcggcggcgc cgatgccgga gcccacggcg aagtcgcgca gctgctgggt
     3781 gacccagccc tccaccgccg gcatggcggc atatggtcgg gccagctcgg agaaggtcga
     3841 cgccgaggtc gcccagggga gtccccgccg ccaggcgacg gcggcgccgg cgatcgcctg
     3901 ctggtcggcg acgacgacgt ccgggccgaa gccgtcgacc gccgcctcga ccccgtcacg
     3961 catcgccgct ccgatcggca gcagcacctc ctcccacagc gccttcaggg cggcgaagcc
     4021 gcggaggccg agccagcggg cgcgcatcgc ctcgaggtcc gcagtgctca ggccggttcc
     4081 ggccgggagt agccggcagg gggcggcggg cggcccgggc aggagcgcgc cgacggcctc
     4141 cgggtggccg gcccaggcca cggtatggcc ccgccgctcg agctcccggc cgaccgccac
     4201 cgtcgggttg acgtggccgg ccagcggggg cacgacgaac aggaaccggc tcacgaggcg
     4261 gcccactcca gttccgggtc gctgcattcg gccagccagt cgatcagcag ggccagcacc
     4321 ttcggggtgg cgtcccggag taccgagtgg ccgacccctg ggaacacctc gagccggcac
     4381 tggggcatcg acgcccggat catggcgagc gacgacgcca ggtcggtctg ctccccgtag
     4441 accgccatcg tcgggacctc caacccggcc agctccttgc cggtgaaccg cggggaggcg
     4501 gcgacgtcct cgatcatcgt cgtggcgttg aggaaggcgt tcgtcgtctt gagcgcccgc
     4561 agcttgcgca cggtcgacgg gctgacctcc tcgtccgcgg ggagggcgag ggtctcggaa
     4621 cagagggcga tggcggtcag cgcgtcggcg acgtcctcga cccagctccc gccgtcgccg
     4681 gtgtcggcgc agtggggctc gatcagggtg agcccggcaa gccgttccgg gtggcgcagc
     4741 ccggcccgca gggcgaccga tgccccgtag ctgtgcccga ccaggtgcac cggggcgccg
     4801 acgccgaggg cgtcgacgac ggcgaggagg tcctcgaccg agtcgtcgag cgtgtagccg
     4861 gcgggggtct gctcggagcg gccgtggccc cggaggtcgt acaggatggc atcggcgccg
     4921 gcctgggcaa ccgggttcgc caggctgtag tacaggctcg acaggttgtc gatgaacagc
     4981 ccgtggatga acaccacgct cggcgggcgc ccggtgggcg gggcgagcg
//
LOCUS       DATGJT010000366         2258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_567324, whole genome shotgun sequence.
ACCESSION   DATGJT010000366 DATGJT010000000
VERSION     DATGJT010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_567324"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..548
                     /locus_tag="VKX24_06260"
     CDS             90..548
                     /locus_tag="VKX24_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013565618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HLJ08121.1"
                     /translation="MSAEQRLRTLGLELSESPPPVGNYVAAARSGNLLFLAGHGPVRP
                     DGAMVRGKVGRDLDLAAARDAARLVGVGLLATLRRELGSLDRVSRIVKVLGMVNCAPG
                     FNQTPAVVDGCSDLLVDVFGDAGRHARSAVGLAELPFDIAVEIELVAEVR"
     gene            622..942
                     /locus_tag="VKX24_06265"
     CDS             622..942
                     /locus_tag="VKX24_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08122.1"
                     /translation="MLCGTRRATPDVSLDADPNSGVSVYDSTKTNGQKGWFVVGGTSA
                     SSPMVAAESAAVGAALDSAYVYGNSMSFLDITSGNNGAPCLAGFDLCTGRGSWIGSGG
                     TAAP"
     gene            953..1756
                     /locus_tag="VKX24_06270"
     CDS             953..1756
                     /locus_tag="VKX24_06270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HLJ08123.1"
                     /translation="MAYRDYTHLGFEFPEPGILRILFDNPKSLNSVSPEQHTELARIW
                     GDIDRDPDVSVVIVTGAGTAFSSGGDFGLIEQMTEDFEGRILTMREARDICYGVVNCS
                     KPIVSAMTGPAVGAGLAVGLLADVSIATPATKIVDGHTRLGVAAGDHGVLIWPMLCGM
                     AKAKYHLMTCEPVSGEEAERIGLVSLCVPEEELQERALAVARKLASLSQSAVRWTKYA
                     LNGWLRTAGPIFDVSVAYETLGFGGPDVKEGVASLREKRRPAFSGPADS"
     gene            complement(1800..>2258)
                     /locus_tag="VKX24_06275"
     CDS             complement(1800..>2258)
                     /locus_tag="VKX24_06275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019127277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase family protein"
                     /protein_id="HLJ08124.1"
                     /translation="HVAIGLVAAGTLLCSDLMALPAHAFVRHPAYGRSIDRATLRRRL
                     ARQQRASRAGVRTPARQAAPAPAPPAADGDDAVWQRIRNCEAGGNYQRNSGNGYYGAY
                     QMSAGTWHSLGYGGLPHQAPPEVQDQAARKLQARSGWGQWPACSRRVGAR"
BASE COUNT          309 a          794 c          835 g          320 t
ORIGIN      
        1 tggctcgtcg agcacgccgc gccgttcggg ttctacccct acgacaccga gccgtggcac
       61 tgggagtaca acccggcctg ggaggcagca tgagcgccga gcaacggttg aggacgctgg
      121 gactcgagct ctccgagtct cctccgccgg tgggcaacta cgtggccgcc gcgcggagcg
      181 gcaacctcct cttcctggcc ggccacggcc cggtccggcc cgacggcgcc atggtccggg
      241 gcaaggtcgg ccgggacctc gacctcgccg cggcccggga cgccgcccgg ctcgtcggcg
      301 tcggactgct ggccaccttg cgccgggagc tcggcagcct cgaccgcgtg agccggatcg
      361 tgaaggtcct cggtatggtc aactgcgccc cgggcttcaa ccagaccccg gcggtcgtcg
      421 acggctgttc ggacctcctc gtcgacgtgt tcggcgacgc cggccgccac gcccgctccg
      481 ccgtcgggct ggcggagctg cccttcgaca tcgctgtcga gatcgagctc gtggccgagg
      541 ttcgctagcc aagcgtcgcc ggagcgcggc ggttgcagcg cctatgaggc cgccccggcg
      601 gcgcagtccg ggctgagcca ggtgctgtgc ggcaccaggc gggcgactcc ggatgtctcg
      661 ctcgacgccg acccgaattc cggcgtgtcg gtctacgaca gcaccaaaac caacggccag
      721 aagggctggt tcgtcgtggg cgggaccagt gcctcgtccc cgatggtggc cgccgagtcc
      781 gccgcggtgg gcgcggccct cgactccgcc tacgtgtacg gcaattcgat gagcttcctc
      841 gacatcacaa gcggcaacaa cggcgctccc tgcctcgccg gcttcgacct ctgcaccggc
      901 cggggcagct ggatcggcag cggaggtacc gcagcgccgt aatgttcggc gcatggccta
      961 ccgcgactac acgcacctcg gcttcgagtt ccccgagccg ggcatcctcc ggatcctctt
     1021 cgacaatccc aagagcctga actccgtcag cccggagcag cacaccgagc tggcccggat
     1081 ctggggcgac atcgaccgcg accccgacgt cagcgtcgtc atcgtcaccg gcgccggcac
     1141 ggccttctcc tcgggcggcg acttcgggtt gatcgaacag atgacggagg acttcgaggg
     1201 ccgcatcctg accatgcgcg aagcccgcga catctgctac ggggtcgtca actgctccaa
     1261 gccgatcgtg tcggccatga ccgggccggc ggtgggggcg ggcctggccg tcgggctgct
     1321 ggccgacgtg tcgatcgcca cgccggcgac caagatcgtc gacgggcaca cccgcctcgg
     1381 cgtggccgcc ggcgaccacg gcgtcctcat ctggccgatg ctgtgcggga tggccaaggc
     1441 caagtaccac ctgatgacct gcgagccggt gagcggcgaa gaggcggagc ggatcgggct
     1501 ggtgtcgctg tgcgtgcccg aagaggaact gcaggagcgg gcgctggccg tggcccgcaa
     1561 gctggcctcg ctgtcgcaga gcgcggtgcg gtggacgaag tacgccctca acggctggct
     1621 gcggacggcg gggccgatct tcgacgtgtc ggtggcctac gagaccctcg gcttcggcgg
     1681 cccggacgtg aaggagggcg tggcctccct gcgggagaag cgccggccgg ccttcagcgg
     1741 cccggccgac tcctaaggtc gaccgggccg cagagaagcc gctccgggga agttcggggt
     1801 taccgggcgc cgacccggcg ggagcaggcg ggccactggc cccagccgct gcgggcctgg
     1861 agtttccggg ccgcctggtc ctggacttcg ggcggcgcct gatggggcag gccgccgtag
     1921 ccgaggctgt gccacgtgcc ggccgacatc tggtaagcgc cgtagtagcc gttcccgctg
     1981 ttgcgttggt agttcccgcc cgcttcgcag ttgcggatgc gctgccacac ggcatcgtcg
     2041 ccgtcggcgg ccggcggagc gggggccgga gccgcctggc gggccggggt gcggacgccg
     2101 gcgcgcgagg cgcgctgctg ccgcgccagc cggcggcgga gggtcgcccg gtcgatcgag
     2161 cgcccgtagg ccgggtgccg gacgaaggca tgggccggca gggccatgag atcggaacag
     2221 aggagggtgc cggcggccac cagaccgatg gccacgtg
//
LOCUS       DATGJT010000367         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_152714, whole genome shotgun sequence.
ACCESSION   DATGJT010000367 DATGJT010000000
VERSION     DATGJT010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152714"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1222
                     /locus_tag="VKX24_06280"
     CDS             <1..1222
                     /locus_tag="VKX24_06280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006541811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HLJ08125.1"
                     /translation="PLGIRGVVIFKVGDDFTSIANAARRFLDQQDQMDARVHNVFAGH
                     LRAIVGNMTVEEMIRDREKLTQLTRESSGTEMEKLGLIVDSLQIQEIDDPTGYIQNLG
                     RPHAAAVASQARIAQAHADREATENEQQANALKAQAVRDSQIKQAGFQAEVDEAAARA
                     KQAGPLSEATARQEVVVQETKQAELEAHREEQRLQASVRKPADAQAYQQRTLAQGERD
                     ARIAAAEALAKETELQAAAQAQRVKLEAGAEADRVRLAAAAEAEHVRLAAAAQAESTR
                     AIGEAEAAATEAKGRAEGEAVRARGMAAAESIKARADALAENQDAVIGQQLAEQWPAI
                     VEAAARPFGSVDQMIVLNGAQGLSEALAQALSSGVAGLQMARSMLGHSNGRGASDSLG
                     ANTRPSVTEGKGET"
     gene            1219..>2143
                     /locus_tag="VKX24_06285"
     CDS             1219..>2143
                     /locus_tag="VKX24_06285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012782894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ08126.1"
                     /translation="MTDNPTIDALFSEDRKFPPPPEFAANANADATIYDEAKDIESFW
                     TKQAEQITWRQRWNQVLDWSNAPFAKWFVGATLNITESCLDQHLAERGDKVAYYWEGE
                     PGDTRTITYRELHQQVCRAANALASLGVQKGDRVAIYMGMVPELVVAMLACARLGAPH
                     SIVFGGFSSDSLRDRILDAEAKVLITCDGAWRAGSVVPLKEMADASVAETPSIEKVLV
                     VRRTENDVNMVEGRDIWWHDLVDGQSPEHEAVEVDSEHMLYILYTSGTTAKPKGIVHT
                     TGGYAVGTSFTHKYVFDLKPDDVYWCTADIGW"
BASE COUNT          383 a          769 c          737 g          254 t
ORIGIN      
        1 cccgctcggg atccggggcg tggtgatctt caaggtcggc gacgacttca cgtcgatcgc
       61 caacgccgcc cggcgcttcc tcgaccagca ggaccagatg gacgcccgcg tccacaacgt
      121 cttcgccggc cacctccggg ccatcgtcgg caacatgacg gtggaggaga tgatccgcga
      181 ccgcgagaag ctgacccagc tgacccggga gtcgtcgggg acggagatgg agaagctcgg
      241 cctcatcgtc gattcgctcc agatccagga gatcgacgac cccaccggct acatccagaa
      301 tctgggccgg ccccacgccg ccgccgtggc cagccaggcc cgcatcgccc aggcccacgc
      361 cgaccgggag gcgacggaga acgagcagca ggccaacgcc ctcaaggccc aggccgtgcg
      421 agacagccag atcaagcagg ccggcttcca ggccgaggtc gacgaggcgg cggcgagagc
      481 caagcaggcc ggcccgcttt cggaggccac cgcccgccag gaggtggtcg tccaggagac
      541 gaagcaggcc gagctcgagg cccaccggga ggagcagcgg ctgcaggcca gcgtccgcaa
      601 gccggccgac gcccaggcct accagcagcg gacgctggcc cagggcgaac gcgacgcccg
      661 catcgccgcc gccgaggccc tggccaagga gaccgagctc caagccgccg cccaggccca
      721 gcgggtgaag ctggaagcgg gcgccgaagc cgaccgggtc cggctggcgg ccgccgccga
      781 agcggagcac gtccgcctgg ccgcggccgc ccaggccgag tcgacccggg ccatcggcga
      841 ggccgaggcc gccgccaccg aggccaaggg ccgggccgag ggcgaggcag tgcgggcccg
      901 gggcatggcg gcggcggagt cgatcaaggc ccgggccgac gctctggccg agaaccagga
      961 cgccgtcatc ggccagcagc tggcagagca gtggccggcc atcgtcgaag cggcggcccg
     1021 gccctttggt tcagttgacc agatgatcgt actcaacggc gcccaggggc tgtccgaggc
     1081 cctcgcccag gcgctgtcgt cgggcgtcgc cggcctccag atggcgcgga gcatgctggg
     1141 ccattcaaat ggtcgcggcg cgagcgatag cctcggggcc aacactcgtc cgtccgtcac
     1201 cgagggcaag ggggaaacgt gaccgacaat ccgaccatcg acgcactctt cagcgaagac
     1261 cgcaagttcc cgcctccgcc cgagttcgcc gccaacgcca acgccgacgc cacgatctac
     1321 gacgaggcca aggacatcga gtccttctgg acgaagcagg ccgagcagat cacctggcgt
     1381 cagcgctgga accaggtcct cgactggtcg aacgcgccgt tcgccaagtg gttcgtcggc
     1441 gccacgctca acatcaccga gagctgcctc gaccagcacc tggccgaacg gggcgacaag
     1501 gtcgcctatt actgggaagg cgagccaggc gacacccgca cgatcaccta ccgggagctc
     1561 caccagcagg tgtgccgggc ggccaacgcc ctggcgtcgc tcggggtcca gaagggcgac
     1621 cgggtcgcca tctacatggg gatggtcccc gagctcgtgg tcgccatgct ggcctgcgcc
     1681 cggctcggag cgccccactc gatcgtcttc ggcggcttct cgtcggactc gctgcgggac
     1741 cgcatcctcg acgccgaggc caaggttctc atcacctgtg acggcgcctg gcgggccggc
     1801 agcgtggtgc cgctgaagga gatggccgat gcctcggtgg ccgagacgcc gtcgatcgag
     1861 aaggtcctcg tcgtccggcg caccgagaac gacgtgaaca tggtcgaggg ccgcgacatc
     1921 tggtggcacg acctcgtcga cggccagtcg cccgagcacg aggcggtcga ggtcgactcc
     1981 gagcacatgc tctacatcct ttacacatcg gggacgacgg cgaaacccaa gggcatcgtc
     2041 cacaccaccg gcgggtacgc cgtgggcacc tcgttcaccc acaagtacgt cttcgacctc
     2101 aagcccgacg acgtctactg gtgcacggcc gacatcggct ggg
//
LOCUS       DATGJT010000368         2203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_152773, whole genome shotgun sequence.
ACCESSION   DATGJT010000368 DATGJT010000000
VERSION     DATGJT010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152773"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VKX24_06290"
     CDS             <1..242
                     /locus_tag="VKX24_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HLJ08127.1"
                     /translation="LSTEDPAEPVVVEGPAELVTDLAVLERVLAAENEKYETSYGMDM
                     FAPEHNCCFALAPKRVFALASADFTGSPTRWTFSD"
     gene            344..1291
                     /locus_tag="VKX24_06295"
     CDS             344..1291
                     /locus_tag="VKX24_06295"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ08128.1"
                     /translation="MLALGLSACSGSPVARPHGASTSTSTTPASTTVVRPPPGTPHVL
                     VLVMENHSFGDIVGNPDAPYQTELAKSYETATNSYGVGHHSLDNYLALLSGVFDPWST
                     GDCAPGPGCEATDPSFPGQLDKAGIPWDAYMGAMPTDCDRQSDDNGIPGQSYAVRHDP
                     FVYFPELVGADCQRIQPGSRMLGALDAPSPPDFVWYTPQICDDGGGDDPCSTVAAGDR
                     FLSEEIPAIQATSWYRDDGVIVLTYDEGDEAGQGSGEYLKGPGNHVLTVVISAATRGG
                     RDLTAYLNHFGLLSGLEQTYHLGCLGQACSAVNGRLPLP"
     gene            complement(1388..1771)
                     /locus_tag="VKX24_06300"
     CDS             complement(1388..1771)
                     /locus_tag="VKX24_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08129.1"
                     /translation="MFELEFELEPMPGHLPLGMPEVPVGGLAAAAGVPAVVDGELVLL
                     LLAELDVEVDAADPELEVVELELGAAVPELSAAKATEVPTPTRAPLNSTAAISCLVLL
                     FIVRSSFLLVRWDTAMLRLPRGPEL"
     gene            1940..>2203
                     /locus_tag="VKX24_06305"
     CDS             1940..>2203
                     /locus_tag="VKX24_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HLJ08130.1"
                     /translation="MTTFVTGSGLAMTEPDFWRRPLNNRMADFAVLREQGAFIPNEVG
                     ADLFGEAAKFYAVIRHAEVNEISRKPQLFCSGKGSTAIQDLPIE"
BASE COUNT          356 a          822 c          709 g          316 t
ORIGIN      
        1 gcctgtccac ggaagacccg gccgagccgg tcgtcgtcga gggccccgca gagctcgtca
       61 ccgaccttgc cgtcctcgag cgcgtgctcg ccgccgagaa cgagaagtac gagacgagct
      121 acgggatgga catgttcgcc cccgagcaca actgctgctt cgcgctggcc ccgaagcggg
      181 tgttcgcgct ggcttccgcc gacttcacgg gttcgcccac ccgatggaca ttcagcgact
      241 gaggcgcacc ggcccggccc aacactcgcc ccgacgggcc ggtcgccgca caccctgggc
      301 gcggtcttgg agacgtcggt ggccgagcgc tgcgaccctc cttttgctcg cgctcgggtt
      361 gtcggcctgc agcggttcgc cggtcgcccg gccccacggc gcgagcacgt cgacgtcgac
      421 cacacccgct tcgacgaccg tcgtccggcc gcccccgggg acaccgcacg tcctggtcct
      481 ggtcatggag aaccactcct tcggcgacat cgtgggcaac ccggatgccc cttaccagac
      541 cgaactggcc aagtcctacg agacggcgac caactcctac ggtgtcggcc accacagcct
      601 ggacaactac ctggcattgc tgtccggcgt gttcgacccc tggtcgaccg gggactgcgc
      661 acccgggcca ggctgcgagg ccaccgatcc cagcttcccc ggccagctcg acaaggccgg
      721 catcccctgg gacgcgtaca tgggagcgat gccgaccgac tgcgaccggc agagcgacga
      781 caacggcatc cccggacagt cctacgcggt ccgtcacgac ccgttcgtct acttccccga
      841 actggtcggt gccgactgcc aacgcatcca acccgggtcg aggatgctgg gcgccctcga
      901 cgccccctcc ccgcccgact tcgtctggta cacaccgcag atctgtgacg acggcggggg
      961 cgacgaccca tgctcgacgg tcgcggccgg cgaccggttc ctctccgaag agatcccggc
     1021 catccaggcc accagctggt accgcgacga cggggtcatc gtgctcacct acgacgaggg
     1081 cgacgaggcg gggcagggtt cgggcgagta cctgaaaggc cccggcaacc acgtcctcac
     1141 cgtcgtgatc tcggcagcga cccggggagg gcgcgacctc accgcctacc tcaaccactt
     1201 cggcctcctc tcgggcctcg aacagacgta ccacctgggc tgcctcgggc aggcctgctc
     1261 ggccgtcaat ggccggctgc ctttgccatg agcgaggcgg gcggccgtcg gacccgcccg
     1321 gggccgcaag gcgtgttgcg gtccgtcacg cgatcgatcg gatgttctta gctctctctg
     1381 cctgacctca tagctcgggc ccacgtggga gccgcaacat cgcggtgtcc catcggacca
     1441 gaagaaacga ggaacggaca atgaagagaa ggaccaaaca gctgatggcc gccgtgctgt
     1501 tgagcggcgc tctcgtgggt gtcggcactt cggtggcctt cgccgcggac agctccggca
     1561 cagccgctcc gagctcgagc tcgaccacct ccagctccgg atcggcggcg tccacctcga
     1621 cgtcgagctc ggccagcagc aacaacacga gctccccgtc gacaacggcg ggcaccccgg
     1681 cggccgccgc caacccgccc accgggacct ccggcatgcc caacggcaag tgccccggca
     1741 tgggctcgag ttcgaactcg agttcgaaca cgagcggagg ctgaaccccg cacacgggac
     1801 ggcccctccc tctcgggggg ccgtcccgtg ccgcccgacg caccggggtc accgggacgg
     1861 tccctttggg gcgtctcggc tgatcggact accctgcctc ccgtcgggcc gtccgaccgg
     1921 gcaggccgag gaggtcgagg tgaccacgtt cgtgaccggc agcgggctgg cgatgaccga
     1981 gccggacttc tggcgccggc cgctcaacaa ccggatggcg gacttcgccg tcctgagaga
     2041 gcagggcgcc ttcatcccga acgaggtcgg cgccgatctc ttcggcgagg cggcgaagtt
     2101 ctatgcggtg atccggcacg ccgaggtcaa cgagatcagc cggaagcccc agctgttctg
     2161 ctcgggcaag ggctcgaccg ccatccagga cctcccgatc gaa
//
LOCUS       DATGJT010000369         2329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_879009, whole genome shotgun sequence.
ACCESSION   DATGJT010000369 DATGJT010000000
VERSION     DATGJT010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879009"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..172
                     /locus_tag="VKX24_06310"
     CDS             14..172
                     /locus_tag="VKX24_06310"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLJ08131.1"
                     /translation="MNHHQAQDPDTLLATHLDGEALSEDHGFPLRLIGPDRPGVNQTK
                     WVTRVTVL"
     gene            169..669
                     /locus_tag="VKX24_06315"
     CDS             169..669
                     /locus_tag="VKX24_06315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08132.1"
                     /translation="MSTAHPVPRRGRLFWIGTAAGWAVILYGLRGVLHHSLDTRPSQL
                     ARFWIGGAVLHDFLLAPAVLGIGVAVARLAPRRRRTALQQALVICGPLALFAYPEIRG
                     YAHILRNPTSLPHNYTVNLLIVIGAVITAVAVKAFIRRRGGNIRATSARTGPARQDIE
                     APPGKV"
     gene            707..1870
                     /gene="sat"
                     /locus_tag="VKX24_06320"
     CDS             707..1870
                     /gene="sat"
                     /locus_tag="VKX24_06320"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HLJ08133.1"
                     /translation="MSVQPLARDPGPVPLLVAPPRRRELRAAAGAMVAWVPGERPRCD
                     LDLLLTGAMYPLVGFLGRADYEAVCDTMRLADGTLWPMPITLDVPARVATRLGPGDGL
                     ALREQDGTLLAVLWVDDVWRSDLRAEAEAVLRTQSPAHPGVAYLRESTHPFYVGGRIE
                     GVRRPLSPAFGPLSPEPLEMRAEFAHRGWKRIVAFHTRNPMHRAHFELTRQAARSAGA
                     NLLLHPVVGMTKPGDVDPVTRLRCYQALLHRYPPGTVMMAAIPMAMRMSGPRDSLWNA
                     LLRHTFGCTHYIVGRDHAGCADADGRPFYDPYESQDILFRHEAEIGITPVAFPALSYV
                     PGLDRYVPETEIPPGAETRTVSGTELRQLLAGGGAIPEWITFPEVAEVLRSTS"
     gene            complement(1892..>2329)
                     /locus_tag="VKX24_06325"
     CDS             complement(1892..>2329)
                     /locus_tag="VKX24_06325"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ08134.1"
                     /translation="GLPPGCLTLEITESVLMRDAEDAVGIVRALTDLGVRFSIDDFGT
                     GYSSLAYLKRFAAHVLKVDRSFVDGLGRDSQDTAIVRATLALADALGMETIAEGVEHP
                     DQVAQLARLGCRRAQGFYFARPLPPAALATMLTSRPRPVAAAV"
BASE COUNT          302 a          894 c          807 g          326 t
ORIGIN      
        1 ccaggtctcg ttcgtgaacc accaccaggc gcaggacccc gacacgctgc tcgccaccca
       61 tctcgacggc gaagcgctgt cggaggatca cgggttcccg ctgcgcctca tcggccccga
      121 ccgaccgggc gtcaaccaga ccaaatgggt gaccagggtg accgtcctgt gagcacggcc
      181 caccccgtcc cccggcgggg ccggctgttc tggatcggca ccgccgccgg ctgggccgtc
      241 atcctctacg ggctccgggg ggtactccac cactcgctcg acacccgacc gtctcagctg
      301 gcccgcttct ggatcggcgg cgcagtcctc cacgacttcc tcctggcccc cgccgtcctc
      361 ggcatcggcg tcgccgtggc ccgcctggcg ccccggcggc ggcggaccgc gctccagcag
      421 gccctcgtca tctgcggccc gctggcgctc ttcgcctacc cggagatccg gggctacgcc
      481 cacatcctcc gcaacccgac ctcgctcccc cacaactaca cggtgaacct gctgatcgtg
      541 atcggcgccg tcatcaccgc ggtggccgtc aaggcgttca tccggcgccg gggagggaac
      601 attcgggcga cttcggcccg aaccggcccc gccaggcagg acatcgaggc gcccccgggg
      661 aaggtctaag ggctgtcccc ccagcgtcgt cggaggtcgt gttccggtga gtgtccaacc
      721 cctcgcccgg gatcccggac cggtcccgct cctcgtggcg ccgccgcgcc gccgggagtt
      781 gcgggccgcg gccggggcca tggtggcgtg ggtgccgggc gagcggcccc ggtgcgacct
      841 cgacctcctc ctcaccggag cgatgtatcc gctggtcggc ttcctcggcc gcgcggacta
      901 cgaagcggtc tgcgacacga tgcgcctcgc cgacgggacg ctgtggccga tgccgatcac
      961 cctcgacgtc cccgcccggg tggccacccg gctggggccc ggggacgggc tggccctgcg
     1021 ggagcaagac gggacgctgc tggccgtgct gtgggtcgac gacgtgtggc ggtccgacct
     1081 gcgggccgag gccgaggcgg tgctgcggac gcagagcccg gcccatcccg gcgtggccta
     1141 cctccgggag tcgacgcacc cgttctatgt cggcggccgg atcgagggcg tgcgccgccc
     1201 gctgtcgccg gccttcgggc ctctgtcgcc ggagccgctc gagatgcgcg ccgagttcgc
     1261 ccaccggggc tggaagcgca tcgtggcctt ccacacccgc aacccgatgc accgggcgca
     1321 tttcgagctc acccgccagg cggcgcggtc ggccggcgcc aacctcctgc tccatccggt
     1381 ggtcgggatg acgaagcccg gcgacgtcga ccccgtcacc cggctgcgct gctaccaggc
     1441 cctcctccac cgctaccctc ccggaacggt gatgatggcc gccatcccca tggccatgcg
     1501 catgtcgggc ccccgcgact cgctgtggaa cgcgctgctg cgccacacct tcggctgcac
     1561 gcactacatc gtcggccgcg accatgccgg ctgcgccgac gccgacggcc ggccgttcta
     1621 cgacccctac gagtcgcagg acatcctctt ccgtcacgag gccgagatcg gcatcacccc
     1681 ggtggccttc ccggcgctca gctacgtgcc gggcctcgac cgctacgttc ccgagaccga
     1741 gatcccgccc ggagcggaga cgcgcaccgt gagcggcacc gaactgcgcc agctcctcgc
     1801 cggcggcggc gccatcccgg agtggatcac cttccccgag gtcgccgagg ttctccgctc
     1861 gacgtcgtga cgacccgcgt cagccgcggc gtcagacggc ggcggcgacg ggccgcgggc
     1921 gggaggtcag catcgtcgcc agcgccgccg gcggcagggg ccgggcgaaa tagaagccct
     1981 gggcccgccg gcagccgagc cgcgccagct gggcgacctg gtcggggtgt tcgactccct
     2041 cggcgatcgt ctccatgccg agggcgtcgg ccagggccag ggtggcccgg acgatggcgg
     2101 tgtcctggct gtcgcggccc aggccgtcga cgaacgatcg gtcgaccttg aggacgtggg
     2161 cggcgaatcg tttgaggtag gcgagcgacg agtagccggt gccgaagtcg tcgatgctga
     2221 accggacgcc gagatcggtc aaggcgcgga cgatcccgac ggcgtcctcg gcgtcgcgca
     2281 tgaggacgct ctcggtgatc tccagcgtca ggcagccggg cgggagacc
//
LOCUS       DATGJT010000370         4412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_774922, whole genome shotgun sequence.
ACCESSION   DATGJT010000370 DATGJT010000000
VERSION     DATGJT010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4412
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_774922"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /locus_tag="VKX24_06330"
     CDS             <1..595
                     /locus_tag="VKX24_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014180709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cobyrinic acid a,c-diamide synthase"
                     /protein_id="HLJ08135.1"
                     /translation="TFTYTDTLDALVAAGAEPVPFDPLRDPALPEAVDGLIAGGGFPE
                     VYAPELAANRPLLDDVRRRVAGGLPTWAECGGLLWLCRTLDGRPMAGVLPADATMTGR
                     LTLGYREATAAAPSPIGPGGTVLRGHEFHYSTVEPAGDALRFRSRFGERPDGFATPTL
                     LATYLHHHPGGDPSAVARFVDACQARSGGPPSRRCPT"
     gene            618..1520
                     /gene="cobI"
                     /locus_tag="VKX24_06335"
     CDS             618..1520
                     /gene="cobI"
                     /locus_tag="VKX24_06335"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007460714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HLJ08136.1"
                     /translation="MRKTSVYLPDGLKDALAARAAATGRSEAEVIRAAIEAEVRAGTG
                     ATPAAAGAGAGGAPGAEVPVPGRLVGIGVGPGEADLLTVRAVAALLRADRVVAPATAV
                     DAVGRAEAVVRQAVPGRRLERIPFAMDPRRAERDRSVDDAARLLAGYLDGGEEVAFVT
                     LGDPLTYSTFTSVAAAVRRRRPATVVEQVPGVMAFQALAARTGTTVTDERQRLLVRTA
                     LDGEDVGAELADPAVTVVLYKGGRRLPDLAKAAAAAGRLDGAVAGELLGMPGERIGAL
                     SDIAADGPASYLATVILPARNQAQ"
     gene            1517..2374
                     /gene="cobM"
                     /locus_tag="VKX24_06340"
     CDS             1517..2374
                     /gene="cobM"
                     /locus_tag="VKX24_06340"
                     /EC_number="2.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0046026 - precorrin-4
                     C11-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-4 C(11)-methyltransferase"
                     /protein_id="HLJ08137.1"
                     /translation="MISFVGAGPGAADLITLRGAARLAAADVVVWAGSLVPEALLDHC
                     RAGIEVHDSATMTLEDVLAVFAARDEATPIVRLHSGDPALYGAIGEQMDWCLAEQRSF
                     EVVPGVSSLAAAAAALGRELTVPGVSQSVVLTRLAGRTAASMPPGTRGADGDPSTATA
                     GEGVAAFAPHGATMAVFLSAARPDELVAELLAPGSGYGPDTPAAVVVRASWPDETVVR
                     TTVGRLAADLRATGATMTALVLVGEALAGGPVRRRSHLYEPGYSTAYRLRSPAGSTQG
                     RPSARRTRP"
     gene            2421..3707
                     /gene="cbiE"
                     /locus_tag="VKX24_06345"
     CDS             2421..3707
                     /gene="cbiE"
                     /locus_tag="VKX24_06345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6y C5,15-methyltransferase
                     (decarboxylating) subunit CbiE"
                     /protein_id="HLJ08138.1"
                     /translation="MSTAGRLPVAIVGFLGDEYFGRAAAASLRSADVVLGIGRLLDGL
                     PADVAAKRLEVPGPLADTLDLAAERRALGERVCLLASGDPGFFGIVRVAAARFGAGEL
                     DIHPAPSSVAVAFARAGLHWDDAVVVSAHGRPLPAAVEAVLPHPKAAVLTAPDQPPEA
                     LGRALLEAGCGPRRVTVCAELGHAGEVVTTTDLAGLAAGTFPPLAVVVLEAPAALDAA
                     VAGGPIAAGAGALAGGPVAARAGAGAGGPTLAWGLPDDRYAHRAGMITKAEVRAVALG
                     KLALPGAGVLWDVGAGSGSVAVECARLAPGLRVFAVERRPDDAARLRENARGTAVVVV
                     EGEAPGALADLPDPDRVFLGGGGLDVLESVMDRLRSGGVVVPTYAALDRAAAAANRLG
                     QVVQVAVSRGVPLGGSGALRLAAENPVFVCWGPAPG"
     gene            3704..>4412
                     /locus_tag="VKX24_06350"
     CDS             3704..>4412
                     /locus_tag="VKX24_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020140773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08139.1"
                     /translation="MTARRPAGDTPAGDTPAGRPIVACSVTEAGAALARRLPYEHHHG
                     RLVATVGEHWDEAGGFVLVCATGTAVRAVAPRLADKAADPAVVVVDDGGRWVVALTGG
                     HRGGANVLAREVAALLGAEAVVSTATDGAGLPALDLLPGFGVAGDVASVTRAWLDGSP
                     PSVDVDPALVAWPLPAALADLRPTPAGPAPPGPGSPSVLVTDRAVEPAAGQVVLRPPS
                     LVVGVGSSTGADPDGLHR"
BASE COUNT          413 a         1776 c         1693 g          530 t
ORIGIN      
        1 caccttcacc tacaccgaca cgctcgacgc cctggtggcc gccggtgccg agccggtgcc
       61 gttcgacccg ctgcgggacc cggcgctccc cgaggcggtg gacgggctga tcgccggcgg
      121 tggcttcccc gaggtctacg ccccggagct cgccgccaac cggccgctgc tcgacgacgt
      181 ccgccgccgg gtggcgggcg ggctgccgac gtgggccgag tgcggcgggc tgctgtggct
      241 gtgccggacg ctggacggcc gtccgatggc cggcgtcctc ccggccgacg ccaccatgac
      301 cggccggctc acgctcggct accgggaggc gacggcggcc gccccgtcgc cgatcggccc
      361 gggcgggacc gtcctgcggg ggcacgagtt ccactactcg accgtcgaac cggccggcga
      421 cgccctgcgc ttccgcagcc gcttcgggga acgccccgac ggcttcgcca ccccgacgct
      481 gctcgccacc tacctccacc accaccccgg cggcgacccg tcggccgtcg cccgcttcgt
      541 cgacgcctgc caggcccggt cgggcgggcc gccgagccgc cgctgcccta cgtgatgccc
      601 tacgttgtgc ggccgtgatg cgcaagacca gcgtgtacct cccggacggg ctgaaggacg
      661 ccctggccgc ccgggcggcg gccaccggcc gcagcgaggc cgaagtcatc cgggcggcca
      721 tcgaagcgga ggtccgggcc gggacgggag cgaccccggc cgcggcgggc gccggcgcgg
      781 gcggggcccc cggcgccgag gtgcccgtcc ccggccggct cgtcggcatc ggcgtcggcc
      841 ccggcgaggc cgacctgctc accgtgcggg ccgtggcggc gctcctgcgg gccgaccggg
      901 tcgtcgcccc cgccaccgcc gtcgacgccg tcgggcgggc cgaggccgtc gtccgccagg
      961 cggtgcccgg ccggcggctg gagcggattc ccttcgccat ggatccccgg cgggcggagc
     1021 gggaccggtc ggtggacgat gccgcccgtc tcctggccgg ctacctcgac ggcggcgagg
     1081 aagtggcctt cgtgaccctc ggcgacccgc tgacctactc gacgttcacc tcggtggccg
     1141 ccgccgtccg tcgccgccgg ccggccacgg tggtcgagca ggtcccgggc gtcatggcct
     1201 tccaggcgct ggccgcccgc accggcacga ccgtcaccga cgagcgccag cgcctcctgg
     1261 tgcgcaccgc cctcgacggc gaggacgtcg gagcggagct cgccgacccc gccgtgaccg
     1321 tcgtcctcta caagggcggc cggcggctgc ccgacctggc caaggcggcg gccgccgccg
     1381 gccggctcga cggcgccgtc gccggcgagc tgctcggcat gcccggggag cggatcggcg
     1441 ccctgtcgga catcgccgcc gacgggcccg cctcctacct cgccacggtg atcctcccgg
     1501 ccaggaacca agcccagtga tctccttcgt cggagcgggc ccgggggcgg ccgacctcat
     1561 cacgctgcgg ggcgccgccc gcctggcggc ggcggacgtg gtcgtgtggg ccggctccct
     1621 cgtgcccgag gcgctgctcg accattgccg ggccgggatc gaggtgcacg actcggccac
     1681 catgacgctg gaggacgtcc tcgccgtctt cgccgcccgc gacgaggcga cgccgatcgt
     1741 gcggctccac tccggcgacc cggccctcta cggcgccatc ggggagcaga tggactggtg
     1801 cctggccgag caacgttcgt tcgaggtggt gcccggcgtg tcgtcgctgg cggcggccgc
     1861 cgccgccctc ggccgggagc tgaccgtgcc gggggtgagc cagagcgtgg tcctcacccg
     1921 gctggccggc cgcaccgccg cctccatgcc gcccgggacc cggggcgccg acggggaccc
     1981 ctcgacggcg acggcgggag aaggcgtggc cgccttcgct ccgcacggcg ccaccatggc
     2041 cgtgttcctc tccgccgccc gacccgacga gctggtggcg gagctcctgg cgccgggctc
     2101 gggctacggg cccgacaccc cggcggccgt cgtcgtccgg gccagctggc ccgacgagac
     2161 cgtggtccgg acgaccgtgg gccgcctggc cgccgatctc cgggccaccg gcgccaccat
     2221 gacggcgctg gtgctggtgg gcgaggccct ggccggcggg cccgttcggc gccggtcgca
     2281 cctctacgag ccgggctact ccaccgccta ccgcctccgc tcccccgccg gttcaacgca
     2341 gggccgcccc tccgcccggc gaacccggcc atgaggacga gggcactgcg gcgccgccgg
     2401 tcggaggggg cggccgggcg atgagcacgg cgggcaggct cccggtcgcc atcgtgggct
     2461 ttctcggcga cgagtacttc ggccgggcgg ccgccgcctc cctgcggtcg gccgacgtcg
     2521 tcctcggcat cggccgcctc ctcgacgggc tcccggccga cgtcgccgcc aagcggctcg
     2581 aggtgcccgg cccgctggcc gacaccctcg acctcgccgc cgaacgccgg gccctcggcg
     2641 agcgggtctg cctgctggcg tcgggcgatc ccgggttctt cggcatcgtc cgggtcgccg
     2701 ccgcccgctt cggcgccggc gagctcgaca ttcaccccgc gccgtcgtcg gtggcggtgg
     2761 ccttcgcccg ggccgggctg cactgggacg acgccgtggt cgtgtcggcc cacggccggc
     2821 ccctgccggc ggcggtcgag gcggtcctgc cccatccgaa ggcggcggtc ctgacggccc
     2881 cggaccagcc gcccgaggcc ctcggacggg ccctcctcga ggccggctgc ggaccccggc
     2941 gggtgacggt ctgcgccgag ctcggccacg ccggcgaggt ggtcactacg accgacctcg
     3001 ccgggctggc ggccgggacc ttccccccgc tggcggtggt ggtgctggag gcgccggccg
     3061 ccctcgacgc cgccgtcgcc ggagggccga tcgccgccgg agcgggcgcc ctggccggcg
     3121 ggccggtggc cgcccgagcg ggcgccgggg ccggcgggcc gacgctcgcc tggggcctgc
     3181 ccgacgaccg ctacgcccac cgggccggga tgatcaccaa ggccgaggtc cgggccgtgg
     3241 ccctcgggaa gctggccctg cccggcgccg gcgtcctgtg ggacgtcggc gccggatcgg
     3301 gctcggtggc cgtggagtgc gcccggctgg cgccgggact gcgggtcttc gccgtggagc
     3361 ggcggcccga cgacgccgcc cggctgcggg agaacgcccg gggcacggcg gtggtcgtcg
     3421 tggaggggga agcgccgggg gcgctggccg atcttcccga tcccgacaga gtcttcctgg
     3481 gcggcggggg tctggacgtg ctggaatctg tcatggaccg cttacggtcc ggcggtgtcg
     3541 tcgtccccac ctatgccgct ctcgaccggg cggcggcggc ggcgaaccgg ctcgggcagg
     3601 tggtccaggt ggctgtcagt cgcggggtgc ccctcggggg gagcggcgcc ctgcgactgg
     3661 cggccgaaaa tcccgtcttc gtctgctggg ggccggcgcc gggatgaccg cccgtcggcc
     3721 cgccggggac acgcccgccg gggacacgcc cgccggccgc ccgatcgtcg cctgctcggt
     3781 gaccgaggcc ggcgcggcgc tggcccggcg gctcccctac gagcaccacc acggccggct
     3841 cgtggccacg gtcggcgagc actgggacga ggccggcggc ttcgtcctcg tctgcgccac
     3901 cggaacggcg gtgcgggccg tcgccccccg gctggccgac aaggccgccg acccggcggt
     3961 ggtcgtcgtc gacgacggcg ggcggtgggt ggtggccctc accggcgggc accggggcgg
     4021 cgccaacgtc ctcgcccggg aggtcgccgc cctcctcggc gccgaggcgg tggtcagcac
     4081 cgccaccgac ggcgccggcc tccccgccct cgacctcctg cccggcttcg gcgtcgccgg
     4141 cgacgtcgcc tccgtcaccc gggcctggct cgacgggtcg ccgccctccg tcgacgtcga
     4201 ccccgccctg gtcgcctggc cgctgccggc ggccctcgcc gacctgcggc cgacaccggc
     4261 cgggcccgca ccgccgggcc ccggctcacc gtccgtactg gtcaccgacc gggccgtcga
     4321 gccggccgcc gggcaggtgg tgcttcggcc gccgtcgctg gtggtcggcg tcgggtcgag
     4381 caccggcgcc gatccggacg ggctccaccg gc
//
LOCUS       DATGJT010000371         3119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1499354, whole genome shotgun sequence.
ACCESSION   DATGJT010000371 DATGJT010000000
VERSION     DATGJT010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499354"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..139
                     /locus_tag="VKX24_06355"
     CDS             <1..139
                     /locus_tag="VKX24_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006850784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HLJ08140.1"
                     /translation="GLWHAHHNESGQDAHLIPVQDAGLHTYLRSLDIRFTTRVRMQIG
                     G"
     gene            700..948
                     /locus_tag="VKX24_06360"
     CDS             700..948
                     /locus_tag="VKX24_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08141.1"
                     /translation="MAWYGEDNPFRSHKLYASEDKDEFIRIRSEMIAALPMPRRFLTN
                     IRGPRSAPVQQGWHAGGLYSPNRSDRWEDYWGWYTHVL"
     gene            972..2486
                     /locus_tag="VKX24_06365"
     CDS             972..2486
                     /locus_tag="VKX24_06365"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLJ08142.1"
                     /translation="MESYEVEKEYWDDGGGIEAVNIHYLWTPLGEDPEWETHRLTRFM
                     PPSRREGAGRRHRRRVLKIPARIPDPDTGGLTDRFLLHHYFEIFEEGRRRYSPRYTEE
                     ITTGAGAAAGGAAGRARRQRGRGGPVRFDVGSREAEAGAGVARLGALGALSWYGDPEP
                     GGGRRIAYRGPLRGDGLRLHFGCDGWKQPGRDVALEPVEDGVWVTAPLDLDGHLTVEA
                     CVTDGESWDNNHGVDYRLWVGVDPVDGHLHASGTGHGAFGRPSLEAAMASAGMVAGVV
                     SWFDNAATERLVAAGEGLYPLVWVAPGSTPVEEVADRLAGGFVGIKLHPTLDGYPGDD
                     PALDPYLEVAAAAGRPVAVHSAPGDADPDHIRRLAERHPSVPVILYHTYLGPAEGRRR
                     AVKYLGDHPNLYLETSWCRWKTVLRFVEEVGPERVMFGSDASVDGPAHYRRQPPNVEG
                     AETYNDGLLALVRALGPETARTVLAGTTRRLFRLDDPPGQSKPGQSKPGQSNEA"
     gene            complement(2468..>3119)
                     /locus_tag="VKX24_06370"
     CDS             complement(2468..>3119)
                     /locus_tag="VKX24_06370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08143.1"
                     /translation="SRHLMFQLTKVWVDPGPGVESMEIRYVWCASGGQPAWDGTEEAE
                     VMVPVPGTDPCVRTATLEIPRYVEGSDCYLLHYRFGPGGEHVDGYSPVFTEEIVAREV
                     EYVDHAGDLTEVRVLWSVGGWTAQNWSQATLDGLPASIAAPGGPGEQDGVTDDAIYEL
                     VQTVPLPRRYVARMSGPRGHSVEYVYQLLRTGSPFPEDDFVRWDDNGGKRFYASFD"
BASE COUNT          473 a         1147 c         1087 g          412 t
ORIGIN      
        1 cggtctgtgg cacgcccacc acaacgaatc gggccaggac gcccacctca tccccgtcca
       61 ggacgccggg ctccacacct acctccgctc gctcgacatc cgcttcacga ccagggtgcg
      121 gatgcagatc ggcgggtaac ccccgccgca ttgggtacgc tcccccggga cggtcggtcg
      181 gggggaggtt cccgatggcg atgtcgttct acatcaagaa gagcttcacc gatcccgaac
      241 ccgacatcga gttcgtgaac atccactaca cctggtctcc gcccgggcag ccgcccaact
      301 gggacgccca ccgggagacg cgctcgatgc ccaggggcgg cgtcctgctc cgggggatgg
      361 gcgggacgac gctcgacgac agcggcgaat ggacgcagtc ggtcgccgaa aaagcgggtc
      421 gacctccccg acgacggcgt ccggcgcaag atcctgcgcc tgccgaacat cgtcgtcgac
      481 cccgagaccg gcgcctggca cgagcactac gccttccacc actacttcga gatcttccat
      541 cgcggccaac ggcactacag cccgctgttc agcgaggaga tcgtcaccag ggagatcgag
      601 tacgtcgatc acgtcggcaa cgtcggcggc ctgtgcgtct actggagcat ctacgactgg
      661 gacgcccccc agtacacgcc gaccgaggaa cagaacttcg tggcctggta cggggaggac
      721 aacccgttcc gctcccacaa gctctacgcc tcggaggaca aggacgagtt catccggatc
      781 cgctccgaga tgatcgccgc tctcccgatg ccccgacggt tcctgaccaa catccggggg
      841 ccgcggagcg ccccggtgca gcagggctgg cacgccggcg gcctctacag tcccaaccgc
      901 agcgaccggt gggaggacta ctggggctgg tacacccacg tgctgtgacg gccggctgac
      961 gggggcgtcc gatggagagc tacgaagtcg agaaggagta ctgggacgac ggcggcggga
     1021 tcgaggccgt caacatccac tacctgtgga cgccgctcgg cgaggacccg gagtgggaga
     1081 cccaccggct cacccggttc atgccgccgt cgcggaggga gggcgccggc cgccggcacc
     1141 gccgccgggt cctcaagatc ccggcccgga tccccgaccc ggacaccggc ggcctgaccg
     1201 accggttcct gctccaccac tacttcgaga tcttcgagga gggccggcgg cgctactcgc
     1261 cccgctacac cgaggagatc accaccggag cgggagcggc ggccggcgga gcggccggtc
     1321 gggcccgacg acaacgcggc cggggcggcc cggtcagatt cgacgtcggg tcccgagagg
     1381 ccgaggccgg cgctggcgtc gcccggctcg gggccctcgg cgccctttcc tggtacggag
     1441 atcccgagcc cggcggcggc cggcggatcg cctaccgcgg tccgctgcgg ggcgacggcc
     1501 tgcggctcca cttcggctgc gacggctgga agcaacccgg gcgcgacgtc gccctcgagc
     1561 cggtggagga cggggtatgg gtcaccgccc cgctcgacct cgacgggcac ctcacggtgg
     1621 aggcctgcgt caccgacggc gagtcgtggg acaacaacca cggcgtcgac taccggctgt
     1681 gggtcggcgt cgaccccgtc gacggccacc tccacgccag cgggacgggt cacggcgcct
     1741 tcggccggcc gagcctcgag gcggccatgg cctcggcggg gatggtggcg ggcgtcgtgt
     1801 cgtggttcga caacgccgcc accgagcgcc tggtcgccgc cggggaaggg ctctacccgc
     1861 tggtctgggt ggcgcccggg tcgacgccgg tcgaggaggt ggccgaccgg ctcgccggcg
     1921 ggttcgtcgg catcaagctg cacccgaccc tcgacggcta tcccggcgac gatcccgccc
     1981 tcgaccccta cctggaggtg gccgccgccg ccggccgccc ggtggccgtc cacagcgctc
     2041 cgggcgacgc cgaccccgac cacatccgcc gcctcgccga gcggcacccg tcggtgccgg
     2101 tgatcctgta ccacacctac ctggggccgg ccgagggccg ccggcgggcc gtcaaatacc
     2161 tcggcgacca cccgaatctg tacctggaga cgtcgtggtg ccggtggaag accgtcctgc
     2221 ggttcgtgga ggaggtcggg cccgagcgcg tcatgttcgg gtccgacgcc tcggtggacg
     2281 ggccggccca ctaccggcgc caaccgccca acgtcgaagg ggccgagacc tacaacgacg
     2341 ggctgctggc gctcgtccgg gcgctcgggc cggagacggc ccgcacggtc ctggccggca
     2401 ccacccggcg gctgttccgc ctcgacgacc cgccgggtca gtcgaagccg ggtcagtcga
     2461 agccgggtca gtcgaacgag gcgtagaagc gcttgccgcc gttgtcgtcc cagcggacga
     2521 agtcgtcctc cgggaacggc gacccggtgc ggagcagttg gtagacgtat tcgacggagt
     2581 gcccccgggg ccccgacatg cgggcgacgt aacgccgggg gagcggcacg gtctgcacga
     2641 gctcgtagat ggcgtcgtcg gtcacgccgt cctgctcgcc cggcccgccg ggtgcggcga
     2701 tcgacgccgg cagcccgtcg agcgtggcct gggaccagtt ctgcgccgtc cacccgccga
     2761 cgctccacag cacccggacc tcggtcaggt cgccggcgtg gtcgacgtac tccacctccc
     2821 gggcgacgat ctcctcggtg aagaccggcg aatagccgtc gacgtgctcg ccgccggggc
     2881 cgaaccggta gtgcagcagg tagcagtccg agccctcgac gtagcggggg atctccagcg
     2941 tcgccgtccg cacgcagggg tccgtgcccg gcaccggcac catgacctcc gcttcctccg
     3001 tgccgtccca ggcgggctgg ccgccggagg cgcaccagac gtagcggatc tccatcgact
     3061 ccacgccggg ccccgggtcg acccatacct tggtcagctg gaacatcagg tgtcgactt
//
LOCUS       DATGJT010000372         4980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_567833, whole genome shotgun sequence.
ACCESSION   DATGJT010000372 DATGJT010000000
VERSION     DATGJT010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4980
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_567833"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1399
                     /gene="uvrA"
                     /locus_tag="VKX24_06375"
     CDS             <1..1399
                     /gene="uvrA"
                     /locus_tag="VKX24_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018156101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HLJ08144.1"
                     /translation="GSSLVGVLYVLDEPSIGLHQRDNQRLIDTLVRLRDLGNTVIVVE
                     HDEETIRVADHIVDIGPGAGIHGGEIVVDGTLADLLAEPRSITGAYLAGRRAIPVPEM
                     RRAPGEQWITVRGAREHNLADIDVEFPLGCFVAVTGVSGSGKSTLVNDILFHALMQRI
                     YRSKTVHGRHRTIEGAEALDKVIDIDQSPIGRSPRSNPATYTGVFDKIRTLFAQTQEA
                     KVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMHFLPDVYVPCEVCKGARYNRDTLDVT
                     FKGKNIAEVLDLTVEEGCEFFLNQPVIARHLQTLKDVGLGYIRLGQPATTLSGGEAQR
                     VKLSSELAKRATGRTIYILDEPTTGLHFEDVRHLIGVLQRLVDAGNTVLVIEHNLDVI
                     KTADWVVDLGPEGGDGGGRVVAEGPPEVVAKVPESHTGRFLADALGLASPAPAKSGKA
                     RKPAKRAVAASKKRP"
     gene            complement(1340..3709)
                     /locus_tag="VKX24_06380"
     CDS             complement(1340..3709)
                     /locus_tag="VKX24_06380"
                     /inference="COORDINATES: protein motif:HMM:NF021126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HLJ08145.1"
                     /translation="MARWRLGAVIAAPVLAFADFVVRGRPILPGDGFIYYLPLHVLAA
                     RSWRAGHLPVWNPFSFAGSPLLGVGQAGVFYPANAAFALLSVTAANDLVVVVNFVVAG
                     AGAFLLARRLTGDADAAVVGGLVFGLSGFLFGHVAHQSMNATVSWLPWLFYAYELLRD
                     RLTAPRLALGGAAVGLSLVAGHSQMFLFDVGLLVLYAVFVTALDWSAGRTAPLLPAAA
                     MIGVGAGLAAVQLLPTLAILHATRRGSALTYGQATSFSFPRSHLPLLVFPYLFGNSAA
                     AGPFTAGYRGLWNLAELSGYPGMAALALAAAGVGAARSDRRVLALLGVAAVGLLMALG
                     ASSPLGRFVYATPFLGRFRSWGRYVVAVDLAVAVLAAYGVTVLRSAAGRARRAALLRA
                     AAVPVAVALLAVWVHTVGSSQRFVVGGRTAVLALTLPLAAAIAGVGCSVLLAGRRRGA
                     VAATAAVVALDAIFCFGGFFEWRGASPSPAALERALSRRIPAPFGPVADEPGGIDRYL
                     FAGADLAAIPEQSPLTDVKGIRSANGSEALAPAGYLQATGVSQAGEVRDATPLWAAGS
                     RILDLLRVTTVLVDPRSTRPMPDPARFAAGGPVSGSRLVRYEYRPALPDAFVVGEARL
                     VTRAAAVARLQGREPFDPAATALIEGDCRRCTDGRQPGRAGTVQRIGWRTASVDVDVT
                     ADRPGIVVVSQAWFPGWRATVDGHSAPVVRVDGVVQGVPLGPGPHRVRLVYRAPGLRA
                     GAAVTALTAMGLVLALAVGRRRARPGAQQPSGALFRRRHGSLRRLPGLS"
     gene            complement(3755..>4980)
                     /locus_tag="VKX24_06385"
     CDS             complement(3755..>4980)
                     /locus_tag="VKX24_06385"
                     /inference="COORDINATES: protein motif:HMM:NF016104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000009 - alpha-1,6-mannosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0004376 - glycolipid mannosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006506 - GPI anchor biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mannosyltransferase family protein"
                     /protein_id="HLJ08146.1"
                     /translation="CHPFRSGDPLPPHSGMTPPTVRPPVVPAGGPEPGAPGSAPPPGG
                     RPAARAGTALAAYGGSRLLTVAVAALAGWRIGVGPVSVLSRWDAGWFLRVAQEGYPSH
                     VPLAGGHVVESALAFFPLFPLLLKVLAALTPLSDALSGVIVSMAAGAAAAVLLYRIAL
                     RLTDDPDRAVRGVVLFSFFPGSMVLSMPYSEGVMVALAAACLLALLEERWWTAGLCAA
                     LATASRASALALVPACLWAAVSAARRHRRLGPLIAPALAPLGAVAFFGYLRLHTGDAL
                     AYLRAEKAWDSGLSFGRPALTMLGRFLRAPFSAPQPATATLALAFAAVTGVVLLRRRW
                     PAVLSIYTFSVLAISVLTRTDGLRPRDVLTAFPLFLAAADVIEPRWMRLIVPASAAVL
                     AVSLVSHNVGVWGQP"
BASE COUNT          819 a         1828 c         1871 g          462 t
ORIGIN      
        1 cggctcgtcc ctggtcgggg tgctctacgt gctggacgag ccgtcgatcg ggctgcacca
       61 gcgcgacaac cagcgactga tcgacaccct cgtacgcctg cgcgacctcg gcaacacggt
      121 catcgtcgtg gagcacgacg aggagacgat ccgggtcgcc gaccacatcg tcgacatcgg
      181 ccccggggcg gggatccacg gcggcgagat cgtggtcgac ggcacgctcg ccgacctgtt
      241 ggccgaaccc cggtcgatca ccggggccta cctggccggc cggcgcgcca tccccgtccc
      301 cgagatgcgc cgggcccccg gcgagcagtg gatcaccgtg cggggggccc gggagcacaa
      361 cctggccgac atcgacgtcg agttccccct cggctgcttc gtcgccgtca ccggcgtgag
      421 cggcagcggc aagtccacgc tggtcaacga catcctgttc cacgccctga tgcagcggat
      481 ctaccggtcg aagaccgtgc acggccggca ccgcacgatc gagggggccg aagcgctcga
      541 caaggtcatc gacatcgacc agtcgccgat aggccgcagc ccccgttcca accccgccac
      601 ctacaccggc gtgttcgaca agatccgcac gctgttcgcc cagacgcagg aggccaaggt
      661 ccggggctac cagcccggcc ggttctcctt caacgtcaag ggcggccgct gcgaggcctg
      721 cgccggcgac ggcacgatca agatcgagat gcatttcctg cccgacgtct acgtcccctg
      781 cgaggtgtgc aagggcgccc gctacaaccg cgacacgctg gacgtcacct tcaagggcaa
      841 gaacatcgcc gaagtcctcg acctcaccgt ggaggagggc tgcgagttct tcctcaacca
      901 gccggtgatc gcccgccacc tccagaccct gaaggacgtc ggcctcggct acatccggct
      961 cggccagccg gccaccacgc tgtcgggcgg ggaggcccag cgggtgaagc tgtcgtcgga
     1021 gctggccaag cgggccaccg ggcggacgat ctacatcctc gacgagccga ccaccggcct
     1081 ccacttcgaa gacgtgcgcc atctcatcgg agtgctgcag cgcctcgtcg acgccggcaa
     1141 caccgtgctc gtcatcgagc acaacctcga cgtcatcaag acggccgact gggtcgtcga
     1201 cctcggcccg gagggcggcg acggcggcgg ccgggtggtg gccgaaggcc cgcccgaggt
     1261 ggtggcgaag gtccccgagt cgcacaccgg ccgcttcctg gccgacgccc tgggcctggc
     1321 ctcgccggcg ccggccaaat caggaaaggc ccggaagccg gcgaagcgag ccgtggcggc
     1381 gtcgaaaaag cgcccctgaa ggctgctggg cgccggggcg ggcccgccgc cggccgacgg
     1441 ccagcgccag cacgagtccc atcgcggtga gcgccgtgac cgccgctccg gcccgaaggc
     1501 cgggggcccg gtagacgagg cggacgcggt gcgggccggg gccgagcggc acgccctgca
     1561 ccacgccgtc gacccgtacg acaggcgccg agtggccgtc gaccgtggcc cgccagccgg
     1621 ggaaccacgc ctggctgacg acgacgatgc cgggccggtc ggcggtgacg tcgacgtcca
     1681 ccgacgccgt gcgccagccg atcctctgca ccgttccggc ccgcccgggt tgtcggccgt
     1741 ccgtgcagcg ccggcagtcg ccctcgatca gggccgtggc ggctggatcg aagggttccc
     1801 ggccctgcag ccgggccacc gccgccgccc gggtcaccag gcgggcttcg ccgacgacga
     1861 aggcgtcggg cagcgccggc cggtactcgt agcgcaccag acgggagccc gacaccgggc
     1921 cgccggccgc gaaacgggcg gggtcgggca tcggccgggt cgaccggggg tcgaccagga
     1981 cggtggtgac ccggagcaga tcgaggatcc ggctgccggc ggcccacagc ggcgtggcgt
     2041 cgcgcacctc gccggcctgg ctgacaccgg tcgcctgcag gtagccggcc ggggccagcg
     2101 cctccgatcc gttggccgag cggatgccct tgacgtcggt gagcggcgac tgctcgggaa
     2161 tagcggccag gtcggccccg gcgaacagat agcggtcgat cccgccgggc tcgtcggcga
     2221 ccggcccgaa cggtgccggg atccggcggg agagggcccg ttccaacgcc gcgggcgacg
     2281 ggctcgctcc ccgccactcg aagaaaccgc cgaagcagaa gatggcgtcg agtgcgacga
     2341 cggcggcggt cgcggccacg gccccccgcc gccgcccggc cagcaggacg ctgcagccga
     2401 caccggcgat cgccgccgcc agcggcagcg tgagggccag caccgccgtc cgccccccga
     2461 cgacgaagcg ctgcgacgag ccgacggtat ggacccagac ggccagcagc gccacggcca
     2521 ccggcacggc cgcggcccgg agcagcgccg cccgccgggc ccggccggcc gccgaccgga
     2581 ggacggtgac cccgtaggcg gcgaggacgg cgacggcgag atccacggcc acgacgtagc
     2641 gcccccacga tcggaaccgc cccaggaacg gcgtggcgta gacgaaccgg cccagcggcg
     2701 aagaagcgcc gagcgccatc agcaggccga cggcggccac gccgagcagg gccaggaccc
     2761 gccggtcgga acgggcggcg ccgacccccg ccgccgccag cgccagcgcc gccatccccg
     2821 ggtagccgct cagctcggcc aggttccaca ggccccggta gccggcggtg aacggcccgg
     2881 cggcggcgga gttgccgaac aggtagggga agacgagcag gggaaggtgg gagcggggga
     2941 acgagaacga cgtggcctgc ccgtaggtca gcgccgatcc ccgccgggtg gcgtgcagga
     3001 tggccagcgt cgggagcagc tggacggcgg cgaggccggc gccgaccccg atcatcgccg
     3061 ccgccggcag cagcggagcg gtccggccgg cgctccagtc gagggcggtg acgaagacgg
     3121 cgtagaggac gagcagcccg acgtcgaaca ggaacatctg gctgtgcccg gcgaccagcg
     3181 acagccccac cgccgcgccc ccgagcgcca ggcgtggcgc cgtcagacgg tcccggagca
     3241 gttcgtaggc gtagaacagc cacggcagcc acgacacggt ggcgttcatg ctctggtggg
     3301 ccacatggcc gaacaggaag cccgacaggc cgaagaccag cccgccgacg acggcggcgt
     3361 cggcgtcacc cgtgagccgg cgggccaaca ggaacgcccc ggcgccggcc acgacgaagt
     3421 tgacgacgac cacgaggtcg ttggccgccg tcaccgacag gagagcgaag gcggcgttgg
     3481 ccgggtagaa cacgccggcc tgcccgacgc cgagcaacgg cgaaccggcg aacgagaacg
     3541 gattccagac ggggaggtgc ccggcccgcc atgaccgggc ggccagcacg tggagcggca
     3601 ggtagtagat gaacccgtca ccggggagga tgggccggcc gcggacgacg aagtcggcga
     3661 aggccaggac cggagccgca atgaccgccc ccagccgcca gcgcgccatg ggtcggcagg
     3721 ctactcacgg agcggacccc cgacccgcca acggtcaggg ctggccccac acccccacgt
     3781 tgtgcgagac cagcgacacg gcgaggacgg cggcgctggc cggcacgatc agccgcatcc
     3841 agcgcggttc gatgacgtcg gcggcggcca ggaacagggg gaaggcggtg aggacgtcgc
     3901 ggggccggag cccgtccgtc cgggtgagga cgctgatcgc cagtaccgag aacgtgtaga
     3961 tcgacagcac cgccggccag cgccgccgga gcagcacgac gccggtcacc gcggcgaagg
     4021 ccagcgccag ggtggccgtg gcgggctgcg gcgccgagaa cggcgcccgg aggaaccgcc
     4081 cgagcatcgt caacgccggc cgcccgaagg agagcccgct gtcccaggcc ttctccgccc
     4141 ggaggtaggc cagggcatcg ccggtgtgga ggcgcaggta cccgaagaag gccacggcac
     4201 cgaggggggc gagggccggg gcgatgagcg gacccaaccg ccggtggcgg cgggcggccg
     4261 agacggcggc ccagaggcag gcggggacca gcgccagggc cgacgcccgg gaggcggtgg
     4321 ccagcgcggc gcacaacccc gccgtccacc accgctcctc cagcagggcc agcaggcagg
     4381 cggccgccag cgcgaccatc acgccctcgg agtacggcat cgacagcacc atcgagccgg
     4441 ggaagaacga gaacaggacg acgccccgca ccgcccggtc ggggtcgtcg gtcagccgga
     4501 gagcgatgcg gtacagcagg acggccgccg ccgccccggc cgccatcgag acgatcacgc
     4561 ccgacagggc gtcggacagc ggcgtgaggg cggcgaggac cttcagcagc agcgggaaca
     4621 gcgggaagaa ggccagggcg ctctcgacca cgtggccgcc ggccaggggg acgtggctcg
     4681 gatagccctc ctgggccacc cgcaggaacc agccggcgtc ccaccggctg aggacggaga
     4741 cggggccgac gccgatccgc cagccggcca gggcggccac cgccaccgtg agcagccggg
     4801 atccgccgta ggcggcgagc gccgtgccgg cccgggcggc cggtcggccg ccgggcggcg
     4861 gggccgagcc cggcgcgccc ggctccgggc cgccggccgg gacgaccggg ggccggacgg
     4921 tgggcggcgt catcccggag tgcggcggta gagggtcacc gctccgaaat gggtgacata
//
LOCUS       DATGJT010000373         3085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1187079, whole genome shotgun sequence.
ACCESSION   DATGJT010000373 DATGJT010000000
VERSION     DATGJT010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1187079"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..612)
                     /locus_tag="VKX24_06390"
     CDS             complement(16..612)
                     /locus_tag="VKX24_06390"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catechol 1,2-dioxygenase"
                     /protein_id="HLJ08147.1"
                     /translation="MTNDADCRPWVEQDEGPYHLDGEPLRRDLIEDRTGVPLALAITL
                     RHDDGTPVVGALVDVWHCDALGRYSGFPAPADGEGDPAAAPADEPAEHFLRGRQPTDG
                     EGRCEFRTVYPGWYGGRTVHIHVIAEVDGRRSTSPLFFPDDLNDEVLARPPYAERPGR
                     DTTNATDEIFAHDGEATILAVTPDGDGYRADICLRVSR"
     gene            complement(609..1490)
                     /locus_tag="VKX24_06395"
     CDS             complement(609..1490)
                     /locus_tag="VKX24_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005438158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HLJ08148.1"
                     /translation="MPLSEWEATRDTLQLWTQIVGKVRMADEPLVNHWWNVPLYVTVR
                     GLTTSLISHPGGDAFQIDFDFRSHALEVVTVSGGQGRLELRPLAVAEFYGEVMELLAK
                     LGVGTEIWPVPVEIEGAIPFTEDYVHAAYDRGQVERFWLALVQIERVLRRFRGRFIGK
                     ASPVHLFWGALDLAVTRFSGRPAPPHPGGAPNCGPPVMLEAYSHEVSSAGYWPGGGGE
                     GLFYSYAYPEPAGYRDTAVRPDGATFDAELGEFVLPYELVRRAEDPDGLLLEFLQSTY
                     EAAAMTAQWDRAALERR"
     gene            complement(1823..2341)
                     /locus_tag="VKX24_06400"
     CDS             complement(1823..2341)
                     /locus_tag="VKX24_06400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08149.1"
                     /translation="MRQGPDTDPSTGTFVVDVATGALHRIAPDSTWSVSWAPDGDRLA
                     ISTTAVSGTDAHIVGVVLMAADGSSRRLVPSDGFGARYSPDGATIAVGTQQATKVMAP
                     DGSGLRFLHEGGLIAWSPDSRNLVVGDTAGDAIVSLAGCDHHLLTPQKNQDFAAWAPD
                     GRSIAVVAFTGW"
     gene            2733..2966
                     /locus_tag="VKX24_06405"
     CDS             2733..2966
                     /locus_tag="VKX24_06405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08150.1"
                     /translation="MRDAWAGFCGDLQGVRHDLVERWEAGQATIVEALVTYTRTDDST
                     VTVPVVTIYRADGDLIDDYRIFIDLAPLFAKRG"
BASE COUNT          447 a         1058 c         1117 g          463 t
ORIGIN      
        1 cgcgccggat ggccgtcagc gactgacccg gaggcagatg tccgcccggt agccgtctcc
       61 gtcgggagtg acggccagga tcgtggcctc cccgtcgtga gcgaagatct cgtcggtggc
      121 attggtcgtg tcgcggcccg gtcgctcggc gtacggggga cgggccagca cttcgtcgtt
      181 caggtcgtcg gggaagaaca gcgggctcgt cgaccggcgg ccgtcgacct cggcgatgac
      241 gtggatgtgc acggtccggc cgccgtacca gcccggatag accgtccgga actcgcagcg
      301 cccctcgccg tcggtcggct ggcggccccg caggaagtgc tcggccggtt cgtcggcggg
      361 cgcggccgcc gggtcccctt cgccgtcggc gggcgccggg aacccggagt agcggccgag
      421 ggcgtcgcaa tgccagacgt cgaccagtgc accgacgacg ggcgtgccgt cgtcatgacg
      481 gagcgtgatg gcgagcgcca gcgggacgcc ggtgcggtcc tcgatcagat cccgccggag
      541 cggctcgccg tcgaggtggt aggggccctc gtcctgctcc acccaggggc ggcagtcggc
      601 gtcgttggtc atcgccgctc cagggcggcg cgatcccact gcgccgtcat ggccgccgcc
      661 tcgtaggtgc tctgcaggaa ttccagcagc agcccgtccg gatcctccgc ccgccgcacc
      721 aactcgtagg ggaggacgaa ctcgccgagt tcggcgtcga acgtcgcgcc gtccggccgg
      781 acggcggtgt cccggtaacc ggccggttcc ggataggcgt aggagtagaa caggccctcc
      841 ccgccgccgc ccggccagta cccggcgctg ctcacctcgt gggagtacgc ctccagcatg
      901 accggggggc cgcagttcgg ggcaccgccc ggatgcggcg gcgcgggccg gccggagaag
      961 cgggtcacgg cgaggtcgag cgccccccag aagagatgga cggggctggc cttgccgatg
     1021 aaccggccgc ggaaacggcg caggacccgc tcgatctgca ccagcgccag ccagaaccgt
     1081 tccacctggc cccggtcgta ggcggcgtgg acgtagtcct cggtgaaggg gatcgctcct
     1141 tcgatctcca ccggcaccgg ccagatctcc gtgcccacgc cgagtttggc cagcagctcc
     1201 atgacctcgc cgtagaactc ggccacggcc agcggtcgca gttcgagccg gccctggccg
     1261 ccggagaccg tgacgacctc gagggcgtgg gaccggaagt cgaagtcgat ctggaacgcg
     1321 tcgccaccgg gatgggagat cagcgacgtg gtcagaccgc ggacggtcac gtagagcggc
     1381 acgttccacc agtggttgac cagcggctca tcggccatgc ggaccttccc gacgatctgg
     1441 gtccacaact ggagggtgtc gcgggtcgcc tcccattcac tgagcggcaa tgcgggccac
     1501 cgtcctgcgg ctggctgcgt gctcaccggc gcctcccggg ttggtgtgat gtcacggccc
     1561 gcaactcgat ttgcgccgac tcggcggtgg ggacgctgcg cccatgaccg agccacagta
     1621 tcgccacgtc ccggtgccgt tggacgggtc ggacttcgcc gccgccgcgg tgcggacggc
     1681 ccgggcgctg gcggacgctc cggcgccggt ctcggggcgg taagcgtgcc ggagaccccg
     1741 ggcgacaaaa cgcccggcgc gccggtcaag gggccgaacc tcgggcggtt ccgcggtacc
     1801 gtccccgtcc cggcgtccgg acctaccagc cggtgaacgc gacgacggcg atcgaacggc
     1861 cgtcgggcgc ccaggcggcg aagtcctggt tcttctgtgg agtgagaagg tggtggtcgc
     1921 agccggcgag gctgacgatg gcgtcgcccg cggtgtcgcc gacgacgagg ttccgcgagt
     1981 ccggcgacca tgcgatcagg ccgccttcgt gaaggaagcg cagtcctgac ccgtcagggg
     2041 ccatgacctt tgtcgcctgc tgggtaccga cggcgatggt ggcgccgtcg ggtgagtagc
     2101 gggcgccgaa cccgtcgctg ggaacgaggc gccgcgacga cccgtccgcg gccatgagca
     2161 caacaccgac gatgtgggcg tcggtgccgc tgaccgcggt ggtggagatg gcgagccggt
     2221 cgccgtcggg cgcccacgac accgaccacg tcgagtcggg cgcgatccgg tgcagggccc
     2281 ctgtggcgac gtcgaccacg aacgttccgg tggacgggtc ggtgtcgggg ccttggcgca
     2341 catgcccgcc agttagggaa agtggccgaa ctcaatccgt cctcccatgt cgggcgcaca
     2401 ggccggttgc tccgggacgg tcctcttgac ctggggtttc gtgaattctt gggcagcccg
     2461 ccggttgcgg ttgcttctca ccgtaggcag ttgctttgag acctccggcg gcagaacgcg
     2521 gacacgacgg cccgggccgc ccgggtgcgg tggtgccaga cttctgcggc cctgccgccc
     2581 tgccgccaga gaggacagat gcccatgccc ggacacgaga ccctgttcga ggacatcgac
     2641 tcgatggacc ccgatcgtta cgcgcgtcac cttagcgaca acgttgtgat gcgcttcggc
     2701 aacagtgatc ccatggtcgg ccgcgtcccg gtgtgcgcga cgcatgggcg ggattctgcg
     2761 gcgacctgca aggggtccgt catgacctgg tcgaacgctg ggaagcgggg caggccacca
     2821 tcgtcgaggc actcgtgacc tacacccgca ccgacgacag cacggtcacc gtcccagtcg
     2881 tcacgatcta ccgcgccgac ggcgacctga tcgacgacta ccgaatcttc atcgacctcg
     2941 cgccattgtt cgcgaagcgg ggctgagcgg ggcaccttcc caagtgtccg ggttcgtgca
     3001 tctcttcgga gcgattgggt ggaccggcgt tcctgaggaa cacccgtggt tcctgaagga
     3061 cgccggttgc ccgtcccgcc cggca
//
LOCUS       DATGJT010000374         2162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_671736, whole genome shotgun sequence.
ACCESSION   DATGJT010000374 DATGJT010000000
VERSION     DATGJT010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_671736"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VKX24_06410"
     CDS             complement(<1..557)
                     /locus_tag="VKX24_06410"
                     /inference="COORDINATES: protein motif:HMM:NF018449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SBBP repeat-containing protein"
                     /protein_id="HLJ08151.1"
                     /translation="MSRQRQPLRRTPFRSRRLAALLLATGTGAGLTLGALVARADPGD
                     PPGTIRTVAGTTRNYSQQGFSGDGGPAKDAQVYNPRAVAFSRTGDVFIADALNHRIRR
                     IDPNGIITTIAGNPQTSSSGAPIGAFGGDGGPASQAQLNQPHGVAVDSHGNVYVGDSL
                     NNRIRRINFSNGVIQTIAGSDEKHG"
     gene            complement(568..1914)
                     /locus_tag="VKX24_06415"
     CDS             complement(568..1914)
                     /locus_tag="VKX24_06415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08152.1"
                     /translation="MRRLGLLGALVVVPTYPVRAPVAAAEAATAPGTAAAAGPRAFGS
                     EPNRTWGTSPSEYPNDAGKDKAGRVYALAEVGTKVFLGGEFTGVTPPGVGTMAARKDP
                     TPIVHRSYLVAFDVNTGALLDWDAHPDGPVLSLAPSADGTHLYVGGMFRGIGGGRFSR
                     LASINVATGEADPTFAPPIPDAYVKAMALSGDTLYIGGAFTRLGTDARSQLAAVDPRT
                     GALHSDWVPPPNTGGRFVGNTGKPTEDGNPGNVADLKVSPDGTMVVVGGSFLHFAGRS
                     GLIVLDGKTAKPTPWQPVLDRPRPVYGLDVWPSDGRTIFVAAGGYGGAIETFYPGRST
                     KPLWVHKTDGDGMDAVATDSRVYLVGHYDYVLGNNTTCGGTSCTGGNAGDNLNRHIAA
                     FDTRTGAQDMSFNAQMNTPEGPEVALIGAHHLYVGGNFTKVNFEAQPGFAQFPATP"
BASE COUNT          266 a          717 c          832 g          347 t
ORIGIN      
        1 tggccgtgct tctcgtcgct gccggcgatc gtctggatga cgccgttgga gaagttgatc
       61 ctccggatcc ggttgttgag gctgtcgccg acgtagacgt tgccgtggga gtcgacggcc
      121 acgccgtggg gctggttgag ctgcgcctgg ctggccgggc cgccgtcgcc gccaaaggct
      181 ccgatcggcg cgccgctgct cgacgtctgc gggttcccgg cgatcgtcgt gatgatcccg
      241 ttggggtcga tccgccggat gcggtggttg agggcgtcgg cgatgaagac gtccccggtc
      301 cggctgaagg cgacggcccg ggggttgtag acctgggcgt ccttggccgg ccccccgtcg
      361 ccggagaacc cctgctggct gtagttgcgg gtcgtgccgg ccacggtccg gatcgtgccg
      421 ggcgggtcgc cggggtcggc ccgggccacc agggcgccca gcgtcaggcc ggcgcccgtc
      481 cccgtggcca ggagcagggc ggcgagccgt cgggagcgga acggcgtacg gcggagtggc
      541 tggcgctgac gggacatcga tctctcctta tggcgtcgcc gggaactggg cgaagccggg
      601 ctgggcctcg aagttcacct tggtgaagtt gccccccacg tagaggtggt gggcgccgat
      661 gagggccacc tccgggccct ccggcgtgtt catctgggcg ttgaacgaca tgtcctgggc
      721 cccggtgcgg gtgtcgaagg cggcgatgtg ccggttgagg ttgtcgccgg cgttgccgcc
      781 ggtgcacgac gtcccgccgc aggtcgtgtt gttgccgagc acgtagtcgt agtggccgac
      841 gaggtagacc cggctgtcgg tcgccaccgc gtccatcccg tcgccgtcgg tcttgtggac
      901 ccacaacggc ttcgtgctcc ggccgggata gaaggtctcg atcgccccgc cgtagcctcc
      961 ggcggcgacg aagatggtcc ttccgtcgct gggccagacg tcgagcccgt agaccggccg
     1021 gggccggtcc agcaccggct gccacggcgt cggcttggcc gtcttcccgt cgaggacgat
     1081 gaggccgctc cggccggcga agtgcaggaa gctcccgccg acgacgacca tggtcccgtc
     1141 ggggctgacc ttgaggtcgg cgacgttccc cgggttcccg tcctcggtcg gcttgccggt
     1201 gttcccgacg aaccggccac cagtgttggg cggcggcacc cagtcgctgt ggagcgcccc
     1261 cgtccggggg tcgacggcgg ccagctgcga ccgggcgtcg gtgccgagcc gggtgaaggc
     1321 gccgccgatg tagagggtgt cgccgctgag cgccatcgcc ttgacgtagg cgtcggggat
     1381 cgggggggcg aaggtcgggt cggcctcacc ggtggcgacg ttgatcgacg ccagccggga
     1441 gaaccgcccg ccgccgatcc cccggaacat cccgccgacg tagaggtggg tcccgtcggc
     1501 ggagggggcc agcgacagga cggggccgtc ggggtgggca tcccagtcga gcagcgctcc
     1561 ggtgttgacg tcgaaggcga ccaggtagga ccggtggacg atcggtgtgg ggtccttgcg
     1621 ggcggccatg gtccccacgc ccggcggggt caccccggtg aactcgccgc cgaggaagac
     1681 cttcgtcccg acctcggcca gggcgtagac gcggccggcc ttgtccttgc cggcgtcatt
     1741 gggatactcg gacgggctgg tgccccacgt ccggttgggt tcggatccga acgcccgggg
     1801 cccggcggcg gcagccgtgc ccggcgcggt cgcggcctcc gcggccgcca ccggagcccg
     1861 gaccggatag gtcgggacga cgaccagggc gccgaggagg cccagccggc gcacgaggcg
     1921 gaggcaacgg gcgcggccgg gtcggcgcgg gggacgctcg ccgcaccgct ctcccgtccg
     1981 gccccaacgg ctggggcgct ccgaccgttc caccgaatct cccactccgg cccgtcgact
     2041 actgtgcgct tgaagttacg aatgcttaca gaggtgccga tgtggcctct gcgaatttag
     2101 ccgcaaattt ccgtgaccgg tgagggcgga gtttctattc ttgagaattt ttcaggaccg
     2161 cg
//
LOCUS       DATGJT010000375         2134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_463100, whole genome shotgun sequence.
ACCESSION   DATGJT010000375 DATGJT010000000
VERSION     DATGJT010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463100"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..763)
                     /locus_tag="VKX24_06420"
     CDS             complement(<1..763)
                     /locus_tag="VKX24_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016907494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigF"
                     /protein_id="HLJ08153.1"
                     /translation="MAFEATDRHELRRKLEQYAQTGDKALRDEIVGSQVGLAEYLARR
                     FKNRGEPIEDLIQVALLGLLKAVERFDPSRGLEFSTFATPTIVGELKRHFRDKGWAVR
                     VPRRVQELHLRMGTVVNNLSQELGRSPTIPEIAQRAEVSVDEVLEAMEAGRAYRFSSI
                     DAPAGEDEDRAASPAATQLGEDDTGLEEVEQRMLLSPLIASLPKREQMIIHLRFFRGM
                     TQSEIAARLGISQMHVSRLLARSLAQLRDRAGAEAA"
     gene            complement(767..1231)
                     /locus_tag="VKX24_06425"
     CDS             complement(767..1231)
                     /locus_tag="VKX24_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007072791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08154.1"
                     /translation="MVLNGTTRSGLMVGDGEERQQREEELGRGGDVRLVVPAAPEYLR
                     LVRLTAAGLASRLGFTFDEVEDLRIAVDELCFHLLGDADDLDPSGEARTMDLVYSAGA
                     DFIAITGRTSRTGEVAEPSELSEQILDALVDEHEVSGSNGTITFRLRKQRES"
     gene            complement(1311..>2134)
                     /locus_tag="VKX24_06430"
     CDS             complement(1311..>2134)
                     /locus_tag="VKX24_06430"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLJ08155.1"
                     /translation="TGFGQTGPYAGRPGYGTLAESMSGFAHLNGYPEGPPTLPPLALA
                     DGVAGCVGAFATLAALRHRDATGAGQVVDQAIYEPLFWLFGTQALAHDQLGIVPGRTG
                     NRTPMTVPRNSFQAADGRWFGLSAASQQVAERVVRLVGRPDLTEEEWFADHTGRLAHQ
                     DEVEDAIAAWVAKRSSDEVMAAFEAVGAAIAPMYTIADIFADPHYAARGTIPAVEHET
                     LGPVRVPGVVTRLLSTPGAVRHLGRAPGADNDAVLGRRLGHPAAQLAAWREAGVV"
BASE COUNT          278 a          762 c          785 g          309 t
ORIGIN      
        1 gggccgcctc cgccccggcc cggtcgcgga gctgggccag gctgcgggcc agcagccggg
       61 agacgtgcat ctggctgatg ccgagccggg cggcgatctc cgactgcgtc atcccgcgga
      121 agaaccggag gtggatgatc atctgctccc gcttcggcag cgaggcgatc agcggcgaga
      181 gcagcatccg ctgctcgacc tcctccagcc cggtgtcgtc ctccccgagc tgggtggcgg
      241 cggggctcgc ggcgcggtcc tcgtcctccc cggccggcgc gtcgatcgag ctgaagcggt
      301 aggcccggcc ggcttccatg gcctcgagga cctcatcgac ggagacctcg gcccgctggg
      361 cgatctcggg gatcgtgggc gagcggccga gctcctggga gaggttgttg accaccgtcc
      421 ccatccgcag gtgcagctcc tgcacccggc ggggaacgcg gacggcccag cccttgtcgc
      481 ggaagtgccg cttcagctcc ccgacgatcg tcggcgtggc gaacgtcgag aactcgaggc
      541 cccggctcgg atcgaaccgc tcgacggcct tgagcaggcc gagcagggcg acctggatca
      601 ggtcctcgat cggctcgccc cggttcttga accggcgggc caggtattcg gccaggccga
      661 cctgggagcc gacgatctcg tcccgcagcg ccttgtcgcc ggtctgggcg tactgctcga
      721 gcttcctgcg cagctcgtgg cggtccgttg cttcgaaggc catgcgttag gactcgcgct
      781 gctttctcag gcggaacgtg atcgtcccgt tgctgcccga cacctcgtgc tcgtcgacga
      841 gggcgtcgag gatctgttcc gagagctccg acggctcggc gacctcgccc gtccggctgg
      901 tgcggccggt gatggcgatg aagtcggcgc cggccgagta gacgaggtcc atcgtgcggg
      961 cctcgccgga agggtcgagg tcgtcggcgt cgccaagaag gtggaagcag agctcgtcga
     1021 cggcgatgcg caggtcctcc acctcgtcga aggtgaagcc gaggcggctg gccaggccgg
     1081 cggccgtgag gcgtaccagc cgcagatact ccggcgcggc cggcacgacg aggcggacgt
     1141 cgccaccgcg gcccagttct tcctcgcgct gctgccgctc ctcgccgtcg cccaccatca
     1201 gcccgctcct cgtggtcccg ttcaagacca tgatcttgct cttcttccca ttccctgcca
     1261 atcccaacac cggttccgac atgatggaca aatcgggcgg ggccgccgac tcacaccacg
     1321 cccgcctccc gccaggcggc gagctgagcg gccgggtggc cgagccggcg gccgaggacg
     1381 gcgtcgttgt cggcccccgg cgcccgcccg aggtggcgga cggcgccggg ggtcgacagc
     1441 agccgggtga ccacgccggg cacccgcacg gggccgagcg tctcgtgctc cacggccgga
     1501 atcgtccccc gggcggcgta gtggggatcg gcgaagatgt cggcgatggt gtacatcggg
     1561 gcgatggccg ccccgacggc ctcgaaggcc gccatgacct cgtcgctgga gcgcttggcg
     1621 acccaggcgg cgatggcgtc ctccacctcg tcctggtggg ccaggcggcc ggtgtggtcc
     1681 gcgaaccatt cctcttcggt gaggtcgggc cggccgacga gccggaccac ccgctcggcc
     1741 acctgctgcg atgccgccga cagcccgaac caccgcccgt cggccgcctg gaagctgttg
     1801 cgggggaccg tcatcggcgt ccggttgccg gtccggccgg ggacgatgcc gagctggtcg
     1861 tgggccagcg cctgcgtacc gaagagccag aagagcggct cgtagatcgc ctggtcgacc
     1921 acctggccgg cgccggtggc gtcccggtgg cggagggcgg ccagcgtggc gaaggccccg
     1981 acgcagccgg ccacgccgtc ggccagcgcc agcggcggca gcgtcggcgg gccctcgggg
     2041 tagccgttca ggtgggcgaa gccgctcatc gactcggcca gcgtgccgta gccgggccgg
     2101 ccggcgtaag ggccggtctg gccgaagccg gtca
//
LOCUS       DATGJT010000376         5037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_672142, whole genome shotgun sequence.
ACCESSION   DATGJT010000376 DATGJT010000000
VERSION     DATGJT010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5037
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672142"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..1487)
                     /locus_tag="VKX24_06435"
     CDS             complement(81..1487)
                     /locus_tag="VKX24_06435"
                     /inference="COORDINATES: protein motif:HMM:NF042935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO6880 family protein"
                     /protein_id="HLJ08156.1"
                     /translation="MIRTYRLPSPDRTGWLLGLGPDRLVPAGIGLVVSVLALSGTGSV
                     LLAAVPVTVGLALGSIRPGGRPLTELIPAAATFALRRHHRRFSAPLVPRPLATTALPH
                     PLDRQEFLEGHTGDGGPVAIVADRRGGTVAATVRLCSPSPFLLAPDAEQERLVAAFGE
                     ALGTLHRERSRVLHLRWASFAAAHTPLPQGGSGPAAAAMGEVSRAVADVAIHDVLLTL
                     VLAKDRREDDERLVARVAGTVERLSERLQAAGFDISPIDSPDLATALRRRLDPAASPA
                     ARRHRSLAELAGLVMPADVGPSGMEEDWDGLRVDGTRHRAYRVRSWPRGAVQAEWMGD
                     LLLTLPPPRSVCVLFEPVRPLASRRAIERDTARLDSDAEQRRRSGFRVGADHDAAREA
                     LARREAEFTAGHPEVLTAGVVILSAGSSEELDEREAEAFSAAAAAGVELAPWSGCHSA
                     GFALSLPVAFTPDPGRAQ"
     gene            complement(1484..2812)
                     /locus_tag="VKX24_06440"
     CDS             complement(1484..2812)
                     /locus_tag="VKX24_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08157.1"
                     /translation="MTGGVLAGIPNPVEVVTDAAGSVARAATGSIFDGLGSFVLSRLD
                     QACRDIGRELVAILSGPAQVDFTHGWWAGPRGRALAGDIGALAMALTLAFLLLAVLQG
                     VLAGDPGGMLRTVLTQLPLSVLGMVTVVGATELLLGVTDEATHLVLRDTPANLGRFVD
                     GLTATGAVPAGGAVVAFLLLVFLVGAFLVWVELAVRSALVFLLVAFAPLVLAARIWPA
                     ARGVFRRLVELGVAVIVSKFVIALALALGSAALAGGGPSDGGSAHVALSLEGLLGGAT
                     LMGLAAFTPFVVLRLLPVIETAAVAHGVSSSPVRGAQAAATAGTLPRRVSRMVATGGP
                     AGTAPGLGGPALGGAAGVGIAAGSMGTTGSSTPQSRSESPATRPEPGAREGTVRPHSD
                     RPDHAADNASARPAPTVAATPNVSDGTQVAQPPRRPDRGPGPEPPRGRDT"
     gene            complement(2809..3147)
                     /locus_tag="VKX24_06445"
     CDS             complement(2809..3147)
                     /locus_tag="VKX24_06445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08158.1"
                     /translation="MADNVRGELHRLRDGYPGGTTRFWVGPLGVRSSDDGPDRVRVEV
                     WFSRVVAPPRVPLYEEWRVAKVTLTREGGVWRLADYDDVPGPRPGAHPVTTDPPADVS
                     AVSPFEAVSE"
     gene            complement(3420..3704)
                     /locus_tag="VKX24_06450"
     CDS             complement(3420..3704)
                     /locus_tag="VKX24_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08159.1"
                     /translation="MLLLFAIDLNVSPTSAGMPGAELISKLLSWLSQLALWGSLASIL
                     VGAAIYGLSKEGGHGYNATRGRSLAAGGAVGAVLAGLAPTIVKLLFQAAS"
     gene            3884..4408
                     /gene="ssb"
                     /locus_tag="VKX24_06455"
     CDS             3884..4408
                     /gene="ssb"
                     /locus_tag="VKX24_06455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HLJ08160.1"
                     /translation="MNDARLIYSIPEAAALLGISRSQAYSYARTGELRTVRFGGHIGV
                     PRNALGEMLDKNDGDALPTDVGGRPINKVTVSGRLTRDAEMRTTRSGLSLCIARLAVQ
                     KRAGNEGAFFIDVVAYGDRAGRLAELRKGQPVKVAGRLDHREWTTGDGTARQTHQIIA
                     RTVDRLDQSWDPVA"
     gene            4589..>5037
                     /locus_tag="VKX24_06460"
     CDS             4589..>5037
                     /locus_tag="VKX24_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08161.1"
                     /translation="MNAAARVRPPRLVVIDEGYDRRRASDKFSRFGRYLAMRLPAVAH
                     ADPDVLTNRIRWAAFAWAAATPPVMSPGYIRWNDPVEDIELNWDDGQLAADIVIRTES
                     PARLVGWRSWQRDRHGHLIEPWPADRIALNRLSLRTVLDLVLPDPPGP"
BASE COUNT          814 a         1820 c         1824 g          579 t
ORIGIN      
        1 ctgccggcgg ggtgtaagac cgggaaagag gccgcaggcc tgggcggtgg tcgcccggag
       61 ccgcacgagc ccgggggccc tcactgggcc cgccccgggt cgggcgtgaa ggccacgggc
      121 agcgacaggg cgaacccggc actgtggcaa ccggaccagg gggccagttc cactccggcg
      181 gccgccgccg ccgagaacgc ctcggcctcc cgctcgtcga gttcctcgct gctcccggcc
      241 gagaggatga cgactccggc ggtgaggact tcggggtggc cggcggtgaa ctctgcttcc
      301 cggcgggcga gggcttcccg ggctgcgtcg tggtcggcac cgacccggaa gcccgagcgg
      361 cggcgctgct cggcatccga gtcgagccgg gcggtgtccc gctcgatggc ccggcgggag
      421 gcgagcggcc ggaccggttc gaacagcacg cagaccgagc ggggtggcgg aagtgtcagc
      481 agcagatcac ccatccactc ggcctggacg gcgcctcggg gccaggatcg gacgcggtac
      541 gcccggtgcc gcgtcccgtc gaccctcagc ccgtcccagt cctcttccat gccggagggc
      601 ccgacatcgg cgggcatgac cagaccggcg agctcggcca gcgaccggtg ccgccgtgcg
      661 gccggcgagg cggcggggtc caggcgccgc cggagggcgg tggccaggtc ggggctgtcg
      721 atcggcgaga tgtcgaaccc ggcggcctgc aggcgctcgg agagccgctc caccgtcccg
      781 gcgacccggg cgacgagccg ttcgtcgtcc tcgcgtcgat ccttcgccag cacgagggtc
      841 agcagcacgt cgtggatggc gacgtcggcc actgcccggc tcacctcacc catcgccgca
      901 gccgccggac ccgaaccgcc ttgggggagt ggcgtgtgag ccgcggcgaa cgacgcccac
      961 cgcaggtgga gcacccgaga gcgctcgcgg tgcagggtcc cgagggcctc cccgaaggcg
     1021 gccacgagcc gctcctgttc ggcgtccggc gccaagagga acgggctcgg tgagcagagc
     1081 cgcacggtgg cagccacggt accgcctcgc cggtcggcga cgatggccac cggcccaccg
     1141 tcgccggtgt ggccctcgag aaactcctga cggtcgagcg ggtgggggag tgcggtcgtg
     1201 gcgaggggcc ggggaaccag gggggcggag aaccgtcggt ggtgccggcg cagagcgaac
     1261 gtcgccgccg ccgggatcag ttcggtcagc gggcggccgc ccgggcggat cgacccgagg
     1321 gcaagtccga ccgtcacggg gacggcggcc agcagcacgg agccggtgcc gctcagcgcc
     1381 aagacactga cgacgagccc gatgccggcg gggacgaggc ggtcgggtcc caacccgagg
     1441 agccacccgg tgcggtcggg ggaggggagg cggtaggtcc ggatcacgtg tcacgtcctc
     1501 tcggtggctc ggggcccggc ccccggtcag gacggcgcgg cggttgcgcg acctgggttc
     1561 catcggagac gttcggtgtc gccgccaccg tcggagcggg ccgggcgctg gcgttgtcgg
     1621 ccgcatggtc cggccgatcg gaatgcggcc ggacggtgcc ttctcttgcc ccgggctccg
     1681 gacgggttgc gggggactct gagcgggact ggggagtcga ggagcccgtc gtccccatcg
     1741 acccggctgc gatcccaacc ccggcggcgc caccgagagc ggggccgccc aatcccgggg
     1801 cggtgccggc cggaccgccg gtggcgacca tgcggctcac ccgtctgggc agcgtcccgg
     1861 cggtcgccgc ggcctgcgca ccccggacgg gcgaggagga gacgccgtgg gcgaccgccg
     1921 ccgtctcgat caccggcagg agacgcagca cgacgaaggg cgtgaaggcg gccaagccca
     1981 tcagcgtcgc cccgcccagc aggccctcca gggacagggc gacgtgggcc gatccgccgt
     2041 cactcggccc gccgccggcc agcgcggccg aaccgagcgc caacgccagc gcgatcacga
     2101 acttcgacac gatcacggcg accccgagtt cgacgaggcg acggaagacg ccacgggcgg
     2161 cgggccagat tcgggcggcc agcacgaggg gtgcgaaggc caccagcagg aagacgagag
     2221 ccgagcggac ggccaactcc acccagacca ggaaggcccc gacgaggaag acgagcagga
     2281 ggaacgccac gacggcccca ccggccggaa cggcgcccgt cgccgtgagt ccgtccacga
     2341 accgaccgag attcgccggt gtatccctca acaccaggtg cgtcgcctca tccgtgaccc
     2401 cgaggagcaa ctccgttgcg ccgacgaccg tcaccatgcc gagcaccgac agcggaagtt
     2461 gggtgagaac ggtgcggagc atcccgccgg ggtcgccggc caggacaccc tgcagcacgg
     2521 cgaggagcag gaaggcgagc gtgagcgcca tcgccagagc gccgatgtcg ccggcgaggg
     2581 cccggcctcg gggcccagcc caccagccat gggtgaagtc gacctgcgcc ggtcccgaca
     2641 ggatcgccac cagctctcgg ccgatgtcgc ggcaggcctg gtcgagcctg gacaggacga
     2701 aggagccgag gccgtcgaag atcgagccgg ttgcggcccg ggcgacgctg ccggccgcgt
     2761 cggtgacaac ctcgaccgga ttgggaattc cggccagcac gccgcccgtc attcggagac
     2821 ggcctcgaac ggcgacacgg cgctgacgtc cgccggcggg tcggtcgtaa ccggatgcgc
     2881 tccggggcgg ggcccgggca cgtcgtcgta gtcggcgagg cgccagacgc caccctcccg
     2941 ggtgagggtc accttggcga cccgccattc ctcgtagagg gggacacgcg gaggtgcgac
     3001 gacgcgactg aaccacacct cgacccgcac ccggtccggc ccgtcgtccg acgatcgcac
     3061 tccgagcggc ccgacccaga aacgcgtcgt tccgcccggg tagccgtcac gcaggcggtg
     3121 gagctccccg cgaacgttgt ccgccaacct gtcgccatcg gcggcagtcg acaccgcccg
     3181 gatctcggcc gcggcaacgt ccggtcctgc agccgggaac cgggtttggg cccgcaggat
     3241 catgacggcg atccgagagg ggtcatcggc ccgatccgcc gaggccgaca cgaagaagct
     3301 gtcggggcgg gggagcgtgc cacgggctcg agggcgagcc tcgtgcaaat agcgtccgcc
     3361 gatcacaagg gctgcgacgg cgccgaactg gacggcgcgg tgccgtacga gacggcggat
     3421 catgacgccg cctggaacaa caacttgacg atggtagggg cgagcccggc aaggacggcg
     3481 ccgaccgcgc ccccggcggc cagggaccgg ccccgggtgg cgttgtaccc gtgacctccc
     3541 tccttcgaca gcccgtagat ggcggcgccg accaggatgc tggccaagga tccccacaac
     3601 gccagctgcg acagccagga caggagcttg gagatgagct cggcccccgg catcccggcc
     3661 gaggtcgggc tcacattcag gtctatggca aacaggagca gcaccgtggc gacctcctcg
     3721 tcgatccgta cacccggagt aagcgacgcg ccggcggccg aacgcgacag agaaattcgg
     3781 ccggccccaa gaaatccgcc tgtcgcgttc cggtctcggc gcggcgctta ctaccggtga
     3841 gacccatcga agggccggca cgacccggcc cgaggaggag gcgatgaacg acgcccgcct
     3901 gatctactcc atccccgaag cagccgccct gctcgggatc tcccgcagcc aggcctacag
     3961 ctacgcccgg acgggggagc tccggacagt ccgcttcggt ggccacatcg gagtgccaag
     4021 gaacgctctt ggcgagatgc tcgacaagaa cgacggtgac gccctgccga ccgatgtcgg
     4081 cggcagaccg atcaacaagg tgaccgtcag cggccggctc acccgcgacg ccgagatgcg
     4141 gacgacacga tccgggctct cgctctgcat cgcgcgtctc gccgtccaga agcgggccgg
     4201 taacgaaggc gcattcttca tcgacgtcgt tgcctatggc gaccgtgccg gccggctggc
     4261 ggagctccgg aagggccagc ccgtcaaggt cgccggacgc ctcgaccatc gggaatggac
     4321 gaccggggac ggcaccgccc gccagaccca tcagatcatc gcccgcaccg tcgaccgact
     4381 cgatcagagc tgggacccgg tcgcgtgagc cgacgagcgg acgttccctc cccgtccacc
     4441 tcgaacacca tctcgcaaga ggagcctgtc gaatgatcga agccacggag tgcccccacg
     4501 accccgcgac catgtcgagc aacggcctgg aggcccgagg cgaccgtccc ggtggcatcc
     4561 ggccgaaccg cgacgacaag gtcacagcgt gaacgccgcc gcccgcgtca ggccgccgag
     4621 gctggttgtc attgacgagg gctacgaccg gaggcgcgcc tcagacaagt tcagccgctt
     4681 cggccggtac ctcgccatgc ggctccctgc cgtcgcacac gccgacccgg acgtcctcac
     4741 gaaccggatc cgctgggcgg cgttcgcctg ggcggccgcc accccacccg tgatgtcccc
     4801 cgggtacatc aggtggaacg accccgtaga ggacatcgag ctcaactggg acgacggtca
     4861 gctcgccgcc gacatcgtca tccggacgga gtcgcccgcc cgcttggtcg gctggcggag
     4921 ctggcagcgc gaccgtcatg gccacctgat cgaaccgtgg cccgccgacc ggatcgccct
     4981 caaccgcctc tcgctgcgaa ctgtcctcga cctcgtactt cctgatccac ccggccc
//
LOCUS       DATGJT010000377         2622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_879661, whole genome shotgun sequence.
ACCESSION   DATGJT010000377 DATGJT010000000
VERSION     DATGJT010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879661"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VKX24_06465"
     CDS             complement(<1..252)
                     /locus_tag="VKX24_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006142901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08162.1"
                     /translation="MTAWSAADVPDLAGRVAVVTGANRGLGREVTRYLAERGARVIMA
                     CRDEAAGEAGAAALRRSAERPGGATLAGPLEVRHLDLASL"
     gene            450..1427
                     /locus_tag="VKX24_06470"
     CDS             450..1427
                     /locus_tag="VKX24_06470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08163.1"
                     /translation="MRRIIRVDRAAGLACTFAGLLLLTGALSSRPAIAAGPGAVTDPA
                     GDTINRDTNAKLSAPAADIVAATVDSGAGGIVLAFTTRQMANPATDPGWASGNTSASW
                     QLDENGDGKVDDIIGYSTDTSAPGGVAGDLTHWPGGNQPATKCTVPAAFDPVAGYTLT
                     VNPTCIGKTSAVTYKVQLTYDTSPGAKKPPLAFDVAPDQGLAGPVPIVVPTAPAAAPP
                     PAGSPAPSATDPGAPPAPSAPAPAGTPSGKPGAPPGTRPAPKPATPSTAARRPASSAA
                     PSPAAPAAAPANGLAATGADTRRLGALGGAMVLLGGLILMSPATRRRTA"
     gene            complement(1449..1976)
                     /locus_tag="VKX24_06475"
     CDS             complement(1449..1976)
                     /locus_tag="VKX24_06475"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HLJ08164.1"
                     /translation="MIYVALLRGVNVGGRTKIPMAALRDTCAAAGCEDVVTYIQSGNV
                     VLRSRLGAERLRTVLEEAISADFGLRPAVMIRTGAEMAAVVARSPHAGADPAHVHVGF
                     LHAPPDASTAKCLAAIDCAPETVTAVGRDLYLHLPNGMGRAELPVRIEKCLRPVEVTV
                     RNWRTVTKLAELSAG"
     gene            2002..>2622
                     /locus_tag="VKX24_06480"
     CDS             2002..>2622
                     /locus_tag="VKX24_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019070187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08165.1"
                     /translation="METDEPRSGHEEGSAESIKDRLGRLEHLLVNPERRLLEGVEQKV
                     VLPAWRRVTRGEPRWPVTLGMLAAVAMQASLPDGVATRPRWLLPGVALVILVVLVSSH
                     TPRIERRSPTLRTLSMVLIGVLSVANAWSAARLVVALVEGTADKSPARLLLTGSAIWL
                     TNVIVFCLWYWELDRGGPVARVYATRAHPDFLFVQMQSPELAPPDWE"
BASE COUNT          334 a         1056 c          923 g          309 t
ORIGIN      
        1 gaggctggcg aggtcgaggt ggcggacctc gagcgggccg gcgagggtcg ccccgcccgg
       61 ccgctccgcc gaccgccgga gagcggcggc accggcctcg ccggccgcct cgtcccggca
      121 ggccatgatc acccgggcgc cccgctccgc cagataccgg gtgacctccc gcccgaggcc
      181 gcggttggcg ccggtgacga cggcgacccg tccggcgaga tcggggacgt ccgccgccga
      241 ccaggccgtc atcgggcgcc gatccgcacg gccgtatcat cgcccacgcc ggccgctggg
      301 gcgcataccg gcccgatggg gacattcgcc ccgatgggga catttgggag gaattccccg
      361 agtcggtgtc gaactcctcc ccagtgcctg cgggaggcgc gccgtcgcac gcctgtcccg
      421 cctgcgggcc ggacggctgg gggtgccgaa tgcggaggat catccgagtc gacagggcgg
      481 ccggcctggc ctgcacgttc gccgggctcc tgctgctgac cggggcgctg tcgtcgcggc
      541 cggccatcgc cgccgggccg ggggccgtca ccgacccggc cggggacacc atcaaccgcg
      601 acaccaacgc caagctgagc gcgcccgcgg ccgacatcgt cgccgccacc gtcgactccg
      661 gtgccggggg catcgtcctg gccttcacga cccggcagat ggccaacccc gccaccgacc
      721 ccggctgggc cagcggcaac acgtcggcct cctggcagct cgacgagaac ggcgacggca
      781 aggtcgacga catcatcggc tactccaccg acaccagcgc gcccggcggc gtcgccggtg
      841 acctgaccca ctggcccggg gggaaccagc cggccacgaa atgcaccgtc ccggccgcct
      901 tcgaccccgt cgccggctac acgctgaccg tgaacccgac ctgcatcggc aagacgtccg
      961 ccgtgacgta caaggtgcag ctgacctacg acaccagccc cggggcgaag aagccgccgc
     1021 tggccttcga cgtcgctccc gaccagggtt tggccggccc ggtgccgatc gtcgtcccca
     1081 ccgcgccggc ggccgccccg ccgcccgccg ggtcgccggc gccgtcggcc accgaccccg
     1141 gggcacctcc ggcgccgtcg gcccccgcac cggccggcac cccctcgggg aagccgggtg
     1201 cgccgccggg caccaggccg gcgccgaagc cggccacccc gtccacggcg gcccggcgcc
     1261 cggcgtcctc ggcggcgccc tccccggcgg ccccggcggc cgcgcccgcc aacgggctcg
     1321 ccgccaccgg cgccgacacc cgccggctcg gcgccctcgg cggcgccatg gtgctcctcg
     1381 gcggcctcat cctcatgagc ccggccaccc ggcgccgcac cgcctgaaac gccggccccc
     1441 gccggcgctc agccggccga cagctccgcc agcttcgtca ccgtccgcca gttgcggacg
     1501 gtgacctcca ccggacgcag gcatttctcg atccggacgg gcagctcggc ccggcccatc
     1561 ccgttcggca ggtggaggta gaggtcgcgg cccaccgccg tcaccgtctc cggagcacag
     1621 tcgatggcgg ccaggcactt cgccgtcgag gcgtcgggag gagcgtggag gaagcccacg
     1681 tgcacgtggg ccggatcggc gccggcgtgg gggctgcggg ccacgacggc cgccatctcc
     1741 gcgcccgtcc ggatcatgac cgccggccgg aggccgaagt cggcggagat cgcctcctcc
     1801 agcaccgtcc gcagccgctc ggcgcccagc cggctgcgga ggacgacgtt gccgctctga
     1861 atgtaggtca cgacgtcctc gcaccctgcc gcggcgcagg tgtcgcgcag cgccgccatg
     1921 gggatcttcg tccggccgcc gacgttgacg ccccgcagca gtgccacgta gatcacggcg
     1981 acaggctgcc acaatgacgt cgtggagacc gacgagcccc ggagcgggca cgaggagggc
     2041 tcggccgagt cgatcaagga ccggctcggc cgcctcgagc acctcctcgt gaaccccgag
     2101 cggcgcctcc tcgagggcgt ggagcagaag gtggtgctgc ccgcctggcg ccgggtaacc
     2161 cggggcgagc cccgctggcc cgtcacgctg gggatgctgg ccgcggtggc catgcaggcc
     2221 agcctccccg acggcgtcgc cacccggccc cgctggcttc tgcccggggt ggcgctcgtc
     2281 atcctggtcg ttctcgtcag cagccacacg ccccgcatcg agcgccgctc accgacgctg
     2341 cggacgctgt cgatggtgct catcggcgtc ctcagcgtcg ccaacgcctg gtcggccgcc
     2401 cggctcgtgg tggcgctggt ggagggcacc gccgacaaga gcccggcgag gctgctgctg
     2461 accggctcgg ccatctggct caccaacgtg atcgtcttct gcctgtggta ctgggagctc
     2521 gaccggggcg ggcccgtggc ccgggtctac gccacgaggg cccatcccga cttcctcttc
     2581 gtccagatgc agagccccga gctggcgcca ccggactggg ag
//
LOCUS       DATGJT010000378         4207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_463549, whole genome shotgun sequence.
ACCESSION   DATGJT010000378 DATGJT010000000
VERSION     DATGJT010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463549"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VKX24_06485"
     CDS             <1..367
                     /locus_tag="VKX24_06485"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLJ08166.1"
                     /translation="DRLGHRAGDRVLVEAAHHLRDAVRPGDSVARIGGDEFAVLCEDV
                     DADQTAHIVRRIQEAMSSPTPIDDETSVTGSIGAVVYQPDPAQAVPTPTELLHDADTA
                     MYQAKADGKNRSRGGAGRC"
     gene            complement(949..1749)
                     /locus_tag="VKX24_06490"
     CDS             complement(949..1749)
                     /locus_tag="VKX24_06490"
                     /inference="COORDINATES: protein motif:HMM:NF025049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HLJ08167.1"
                     /translation="MDINNDELRRELRDLDKEHREVMPKWRDSLRRLMDDKETPTEAK
                     ADLLLGGFNRRRFMNLSGLAVVGGAVLAACGSDKKNSSSSNGSTASTAATTATTAAAA
                     KTDQTIARTAASLENFAVAVYDKAIMNAAALKISDPVAKAAVLFKSQHTEHASAFNAA
                     ATQLGGQPYTDPNPTAAKAFEATIAALKTEQDVLKLAFGLEQIAAQTYQGVGMKLSTP
                     MLRQTSMTVGGVEARHMAILAHFITPPMTVPAAAFQMTDKAIDASFYV"
     gene            complement(1777..2493)
                     /locus_tag="VKX24_06495"
     CDS             complement(1777..2493)
                     /locus_tag="VKX24_06495"
                     /inference="COORDINATES: protein motif:HMM:NF025049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HLJ08168.1"
                     /translation="MEISERELRRLVADSDDQHRAAMDTFTEDNRGLIFETAPSRRKF
                     LAGLGFGSAAVVVGSAVLPMGRLMPRAWAQSAPSDSDIATFAASVEYAAVAAYTAAAK
                     SGLIKTPAVLQAATTFAGQHQQHGDAFKAAGTNPNVMANKGVLDSVTPQLTAAKTEND
                     VVALAYGLENAAAATYIFALGVLNNDKAFNAVASVMPVEAQHAIALGFVLGKTLDDKT
                     FMPSFETADGHVDPAKNPAA"
     gene            complement(2554..2844)
                     /locus_tag="VKX24_06500"
     CDS             complement(2554..2844)
                     /locus_tag="VKX24_06500"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ08169.1"
                     /translation="MTTSAGGAVSSGEAPVEIVNFEFKPQTVTVKPGTKVTWTNGDTA
                     IHAIKDTSSLATPVSKDLGKSDTFSITYDQPGSYSYICGIHNYMTGTVDVVG"
     gene            3309..3788
                     /locus_tag="VKX24_06505"
     CDS             3309..3788
                     /locus_tag="VKX24_06505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08170.1"
                     /translation="MSEPFPRDDRFGRTIDEQRSRALSRLDAATTSAVSKHFAAAAGP
                     GTDDAFVTDLARRLARDLTAIGLGVSDYTCGAVPGGVWLAPAPDRPGVIVTWTQHDAS
                     ALALGPRMHSELQRAMNMILFEIIHSLGYPVERYGPCGAHVVTRFRPPLDGDDTPPP"
     gene            complement(3812..3985)
                     /locus_tag="VKX24_06510"
     CDS             complement(3812..3985)
                     /locus_tag="VKX24_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08171.1"
                     /translation="MALVTAATGEPPIIGGAEPSGEPPVFGWQGGGQRLDRPAFSRGE
                     SHVVVMHPSASDM"
BASE COUNT          637 a         1417 c         1455 g          698 t
ORIGIN      
        1 cgaccggctg gggcaccgcg ccggagaccg ggtgctcgtg gaggcagccc accacctccg
       61 cgacgccgta cgcccagggg actcggttgc ccgtatcggg ggcgacgagt tcgccgtgct
      121 gtgcgaggac gtcgacgccg accagaccgc gcacatcgtc cggcgaattc aagaggcgat
      181 gagctccccg acaccgatcg acgacgagac atcggtgacc ggcagcatcg gtgccgtcgt
      241 ataccaaccc gacccggcac aggcagtccc cacacccacg gagctgctcc acgacgccga
      301 caccgccatg taccaagcca aggccgacgg gaagaaccga tcacgaggcg gtgccgggcg
      361 ctgctgatgg cccccgccaa ggccgacggt cccgccgact cccgagcacg tagcggagaa
      421 ggtaacgaag gagccgcaga ggccgcccgc gtcggattga gacactgcaa gccgaactgg
      481 cgaagttgcg ggccgaagag gacggctgac gtgcggcgat cgacggttcc aatcccgggc
      541 acgactcgcc gaccttgacg aatcggctgt gccgtgtggc tggaggacca ccgccgaaga
      601 gcgatcccac tgcggggatg aagatacccg agggcagccg gcaggccttg ctgacagcga
      661 aggggtcacc cgaggaggaa gcgagagctg cggtgctcct cgtcgccggt tgcctcgcca
      721 cctcgaggtc cgcctcagta gcggccacgt cccgaccgtt cccaggtagc aggaccccgg
      781 tcgcgagacc cccgccgcac gtgcggtgcg cccggcccgt tgatcgacgg tgttggggcc
      841 gtcccaaagg cggacggccc caacaccagt ggttcgtcgg tgactgacag cgacgacgac
      901 gaccgttccc ttcctcgaag tgcaccctgc gagtgggacg gggaagtctc agacgtagaa
      961 cgaggcgtcg atcgccttgt cggtcatctg gaaggccgcc gccggcacgg tcatgggcgg
     1021 ggtgatgaag tgggccagga tcgccatgtg gcgggcctcg acaccaccga ctgtcatgga
     1081 cgtctggcgg agcatcgggg tggacagttt catgccgacg ccctggtatg tctgggctgc
     1141 gatctgctcg agaccgaagg ccagcttgag gacgtcctgc tccgtcttga gcgcggcgat
     1201 cgtggcttcg aaggccttgg ccgccgtcgg gttggggtcg gtgtagggct ggccgccgag
     1261 ctgggtggcg gcggcgttga aggccgaggc gtgctcggtg tgctggctct tgaacagcac
     1321 ggcggccttg gccaccgggt cgctgatctt gagggcggcg gcgttcatga tcgccttgtc
     1381 gtacacggcg acggcgaagt tctcgagcga ggctgccgtc cgggcaatcg tctggtcggt
     1441 cttggcggcg gccgccgtcg tggccgtggt ggccgcggtg gaggccgtcg agccattgct
     1501 gctcgagctg ttcttcttgt cgctgccgca ggcggccagc acggcgccgc cgaccacggc
     1561 cagacccgac aggttcatga accggcgccg gttgaagccg cccaggagga gatcggcctt
     1621 ggcctcggta ggggtctcct tgtcgtccat caggcgccgg agcgagtcac gccacttcgg
     1681 catgacctca cggtgctcct tgtcgaggtc ccgcagctca cgcctgagtt cgtcgttgtt
     1741 gatatccatg gtttctcgtc ctctcgtcag cgtggctcag gcggccgggt tcttggccgg
     1801 gtcgacatgc ccgtcggcgg tttcgaacga cggcatgaac gtcttgtcgt cgagtgtctt
     1861 cccgaggacg aaaccgaggg caatggcgtg ctgcgcctcg acgggcatga ccgacgccac
     1921 agcgttgaag gccttgtcgt tgttcagcac gccgagagcg aagatgtagg tggcggcggc
     1981 ggcgttctcc aggccgtagg ccagggccac gacgtcgttt tcggtcttgg ccgccgtgag
     2041 ctggggcgtg accgagtcga ggacgccctt gttggccatg acgttggggt tggtgccggc
     2101 cgccttgaag gcgtcgccgt gttgctggtg ctggccggcg aaggtcgtgg ccgcctgcag
     2161 gacggccggg gtcttgatga ggccgctctt ggccgcggcc gtgtaggcgg ccaccgcggc
     2221 gtactcgacg ctggcagcaa aggtggcgat gtcgctgtcg ctgggcgcgc tctgggccca
     2281 ggccctcggc atgagcctgc ccatcgggag cacggctgac ccgacgacga ccgccgcgct
     2341 accgaagccg agaccggcca ggaacttcct ccgggatggg gccgtctcga agatgagccc
     2401 ccggttgtcc tccgtgaatg tgtccatggc cgctcggtgc tggtcgtcgc tgtcggcgac
     2461 cagccggcgc agttccctct cactgatctc cacgcaccaa cctccttgaa ggtgttcctc
     2521 atgtgcttct gacgtacaac cccatgacgg ggctcagcca acgacgtcga ctgtccccgt
     2581 catgtagttg tggatcccgc agatgtagct gtacgacccc ggctggtcgt aggtgatcga
     2641 gaacgtgtcg ctcttgccca agtccttgct caccggcgtg gccagggaac tcgtgtcctt
     2701 gatggcgtgg atcgccgtgt cgccgttcgt ccaggtgacc ttggtgcccg gcttcacggt
     2761 gaccgtctgg ggcttgaact cgaagttgac gatttcgacc ggtgcctcgc ccgacgagac
     2821 cgccccgcca gccgacgtgg tcaccgtggc ggaagcccca ctgtccggct tgtcgttctt
     2881 gccacaccct ccgagggcga gcaccgccac catcgccccg accccaagca gcgctcgggg
     2941 tccgcgaccg gtaggtgccg ctgctcgcaa attgggtaaa gctggcattg ctgctcctcg
     3001 aatcgttgcg cacggatctg cagcctgacc cggtgttcgt agccacgcac cgatcggatc
     3061 aaaaaacgat gatcggatcc cgaaatatcc cgccgggatc aaggatccgt cggacccttc
     3121 tccctcgatc tggtggcgga gcggccgcga ccacggccac gccgctcatg gtggagacga
     3181 ctggcacggg cctcggaaga acggccctcc gcttcgtccg ctgcctcgaa agccgggacg
     3241 gctcggtcat ccgggaggga tgatggcgcc gtacccctga gaacccgacg tggccgatcg
     3301 agggtgcaat gagcgaaccc ttccccagag acgaccgctt cgggcggacc atcgacgagc
     3361 aacgctctcg tgccctgagc cggctcgacg ccgcaacgac gagcgcggtg agcaagcact
     3421 tcgccgccgc ggctggcccc ggaaccgacg atgccttcgt gaccgatctg gctcggcggc
     3481 tggctcggga cctgaccgcc atcggcctgg gtgtctcgga ctacacctgc ggcgccgttc
     3541 ccggtggggt ctggctggcc cccgctcccg accggcctgg tgtcatcgtg acctggaccc
     3601 agcacgacgc cagcgccctc gccctgggcc cccggatgca cagcgagctc cagcgggcga
     3661 tgaacatgat cctcttcgag atcatccaca gccttggcta ccccgtggag cgttacggac
     3721 cgtgcggggc gcacgtcgtc acccggttcc gtcctccgct cgacggcgac gacacaccgc
     3781 cgccctgatg gcggcgacgc cggctgcgcg ctcacatatc ggaggcactg ggatgcatca
     3841 cgacgacgtg gctctctccc ctggagaacg ccgggcggtc gaggcgctgg ccgccgccct
     3901 gccagccgaa gaccggtggc tcgccgctcg gctcggcacc accgatgatg ggcggctcac
     3961 cggtcgctgc ggtgacgagc gccatccttc acatgcagtg ggcgggggcg gctcagcctc
     4021 aaacggttgg cattgggtcc tgacgaggct caccgccgtc accgccgccg ccgctccggg
     4081 gtggcgcgac ccgtcccacg acgggcagcg ttgaacgggc gggggtctcg cgtcggctgg
     4141 gccgccgtgg cttcgaacac ggggatgggg cggcgccggt cgtggcccgc gccgccccat
     4201 ccccggt
//
LOCUS       DATGJT010000379         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_153998, whole genome shotgun sequence.
ACCESSION   DATGJT010000379 DATGJT010000000
VERSION     DATGJT010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153998"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VKX24_06515"
     CDS             <1..779
                     /locus_tag="VKX24_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013560660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08172.1"
                     /translation="TSPSSGIASLTGSPRADLARNMAGSPCQALGVPDGQGTIVVIED
                     DPNIADLLDMYLRRDGFRVLQAATGEAGLELTEREQPRLVVVDVGLPERVDGFEVCRT
                     LRSTSDVPIVMLTARDSEIDRVLGLELGADDYVTKPFSPRELVARVRAILRRSEPTIR
                     GGGPRVLEVGSVEVDLDRHEVRTGVGAIALTAREFDLLAFLAENQGLVLSRRQLLDGV
                     WGPDWVGDDRTVDVHVRQLRKKLGGALPLSTVWGVGYRLG"
     gene            760..>2109
                     /locus_tag="VKX24_06520"
     CDS             760..>2109
                     /locus_tag="VKX24_06520"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLJ08173.1"
                     /translation="MATASVEPPARSRAPRLRGRILPVLLSTLVVITVAAGAGSWLLA
                     GQATRADAVSQVIASAKSFGRLQSGVVTVGGPGVTGPELGVEVHILLRLVPLASKTLS
                     AKFLPVNDPAALSNPDVPAAVLRSAASSPTLGAGSVVGGSTGSLAWAVEAVEFRVVGS
                     TRGGTPIDRSRRYVLVLTRTIGSPSVTTPLLLLAGAMVAFAVVVSLLFTRRLTRPLRR
                     AVATTERIAAGDLDARVGAPRGDFPELSALGSAIDTMAESLGSLRNAERQFLLSVSHE
                     LRTPLTSIRGYSEAILDGTAVDPTQAAGIISVESRRLERLVGDLLDLAKLDAKTFSFN
                     FRTVDATEVVEEVAEELRPVADSAGLALVVRPLERPLLVRVDPDRLDQVLANLVENAA
                     KFARSAITLGTATDGRAAQLIVDDDGPGIPPSELGRIFERHYSIDRHARPGRPSGSGL
                     "
BASE COUNT          264 a          796 c          745 g          304 t
ORIGIN      
        1 cgacttcgcc gtcgtccggc atcgccagcc tgacggggtc acctcgcgcc gaccttgccc
       61 gcaacatggc cggatcgcca tgtcaagctc tgggggtgcc ggacggccag gggacgatcg
      121 tggtcatcga ggacgatccg aacatcgccg acctgctcga catgtacctg cgccgtgacg
      181 gcttcagggt cctgcaggcc gcgaccggcg aggcgggtct cgagttgacc gagcgcgagc
      241 aaccgcgtct cgtggtcgtc gacgtcggtc tgccggaacg ggtcgacggg ttcgaggtgt
      301 gccggacgct gcgctcgacg agcgacgtgc ccatcgtgat gctcaccgcc cgggacagcg
      361 agatcgaccg cgtcctcggg ctcgagctcg gggcggacga ctacgtcacg aagccgttct
      421 cgccccgcga gctcgtcgcc cgcgtgcggg cgatcctccg ccggtccgaa ccgacgatcc
      481 ggggcggcgg cccgagggtc ctcgaggtcg gctcggtcga ggtcgacctc gaccgccacg
      541 aggtccgcac cggggtcggg gccatcgcgc tgaccgccag ggagttcgac ctgctcgcct
      601 tcctggcgga gaaccagggc ctcgtgctca gccggcgcca gctcctcgac ggggtgtggg
      661 ggcccgactg ggtcggcgac gaccggacgg tggacgtgca cgtccgccag ctgcgcaaga
      721 agctgggcgg cgccctcccg ctgtccacgg tgtggggcgt tggctaccgc ctcggttgag
      781 cccccggccc ggtcccgggc cccgcgcctg cggggccgga tcctccccgt cctcttgtcg
      841 acgctggtcg tgatcaccgt cgccgccggg gccggatcct ggctgctcgc cgggcaggcg
      901 acccgggccg acgcggtgag ccaggtcatc gccagcgcga agtccttcgg caggttgcag
      961 tccggggtgg tgaccgtcgg cggccccggg gtcacgggcc cggagctcgg ggtggaggtc
     1021 cacatcctgc tgcggctggt cccgctcgcc tcgaagaccc tcagcgccaa gttcctcccg
     1081 gtgaacgacc ccgcggccct gagcaacccc gacgttccgg ccgcggtcct tcggtcggcc
     1141 gcgagctcgc cgacactcgg cgccggctcg gtcgtcggcg gctcgacggg atccctggcg
     1201 tgggcggtcg aagcggtcga gttccgcgtg gtcgggtcga cccgtggcgg cacgccgatc
     1261 gaccggagcc ggaggtacgt gctcgtgctc acccgcacca tcgggagccc gtcggtcacc
     1321 actccgctcc tgctgctcgc cggagcgatg gtcgccttcg ccgtcgtcgt gagcctgctg
     1381 ttcacccgcc ggctcacccg cccgctccgg cgggcggtgg ccacgaccga gcgcatcgcc
     1441 gccggcgacc tggacgcccg cgtgggagcg ccgcgcgggg acttccccga gctctcggcg
     1501 ctcggcagcg ccatcgacac catggccgag agcctgggat cgctgcgcaa cgccgaacga
     1561 cagttcttgc tgtcggtctc ccacgagctc cggacgccgc tcacctccat ccgcgggtac
     1621 tccgaggcga tcctcgacgg gaccgcggtg gaccccaccc aggccgccgg catcatctcg
     1681 gtcgagtccc gccggctcga gcgcctggtc ggcgacctcc tcgacctggc caagctcgac
     1741 gccaagacgt tctcgttcaa cttccgcacg gtcgacgcca ccgaggtggt cgaggaggtc
     1801 gcagaggagc tccgaccggt cgccgactcg gcgggactgg cgctcgttgt ccggccactc
     1861 gagcgaccgc tgctcgtgcg ggtcgacccc gaccgcctcg accaggtcct ggccaacctc
     1921 gtcgagaacg cggccaagtt cgcgcgctcg gcgatcaccc tcggcaccgc caccgacggc
     1981 cgtgcggcgc agctgatcgt ggacgacgac ggcccgggca tccccccgag cgagctcgga
     2041 cggatcttcg aacggcacta cagcatcgac cggcacgccc ggccggggcg cccgagcggc
     2101 tcgggcctc
//
LOCUS       DATGJT010000380         2293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_982357, whole genome shotgun sequence.
ACCESSION   DATGJT010000380 DATGJT010000000
VERSION     DATGJT010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_982357"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1592)
                     /locus_tag="VKX24_06525"
     CDS             complement(<1..1592)
                     /locus_tag="VKX24_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020580330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HLJ08174.1"
                     /translation="MAGERILVLDGAWGTMLQEARLGREAYHGDRFSDHPVDLTGDPD
                     VLNLTRPDLVLSIHERYLAAGADITTTNTFTATAIAQADYGLEHHVTEINLAGARLAR
                     EAAGDRLVAGSVGPLNVTLSLSPSVDDPGFRRASFEQVKEAYCEQMHALAEGGVDLLV
                     IETVFDTLNAKAAVVAAREVVPELPLWISATIVDRSGRTLSGQTIEAFWTSIAHAEPL
                     IVGVNCSLGASEIRPYLVELARAAPCLVSAHPNAGLPNAFGGYDETPEVTARLLRAFA
                     EDGLLNVAGSCCGSTPAHTAAIAAAVAGLAPRCPPGPPARLRVSGLEPFEVTPDTGFV
                     LVGERTNVTGSARFRTLIEGGDFAGAVSVALEQVRGGANVLDVNMDADLLDSEEAMQA
                     FLNVVATEPEVARLPIMVDSSRWSVIEAGLRCIQGKGIVNSISLKEGEEAFLAQARRI
                     RDYGAAVVVMAFDEQGQATEVERRVAVCGRAYDLLTQRAGFAPEDLIFDANVLAVATG
                     IPEHDTYARSFLEALPLIKERCP"
     gene            1797..>2293
                     /locus_tag="VKX24_06530"
     CDS             1797..>2293
                     /locus_tag="VKX24_06530"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012894132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ08175.1"
                     /translation="MRVLTSPETALSPELRRQVASLEHQAWPSIDPRLGHLHDPALEP
                     LSMLLVDGDRVVAALAVLSKALAHRGRTYAARGLSTVVTDRSLRRRGHGLALVTAARE
                     LIAASRADLGLFTCDPPLQGFYERAGWEELPDAVVVGGTPEAPLASDTLGKVTLAGFF
                     SPQAR"
BASE COUNT          302 a          838 c          833 g          320 t
ORIGIN      
        1 gggcagcgct ccttgatcag cggcagcgcc tcgagaaagc tcctcgcgta cgtgtcgtgc
       61 tcggggatgc cggtggcgac ggcgagcacg ttggcgtcga agatcaggtc ctcgggtgcg
      121 aacccggcgc gctgggtgag caggtcgtag gccctcccgc agacggcgac ccgccgctcg
      181 acctcggtgg cctgtccctg ctcgtcgaag gccatgacca cgaccgcggc cccgtagtcc
      241 cggatccgcc tggcctgggc caggaacgcc tcctcgccct ccttgaggct gatcgagttc
      301 acgatcccct tgccctggat gcagcggagg ccggcctcga tcaccgacca gcgcgagctg
      361 tcgaccatga tcggcagccg ggcgacctcg ggctcggtgg ccacgacgtt gaggaaggcc
      421 tgcatcgcct cctcgctgtc gagcaggtcg gcgtccatgt tgacgtcaag gacgttggcg
      481 ccgccccgca cctgctcgag ggccaccgag acggccccgg cgaagtcgcc gccctcgatc
      541 agcgtcctga accgggccga gccggtgacg ttcgtccgct cgccgacgag cacgaatccc
      601 gtgtcggggg tgacctcgaa cggctccagt ccgctcaccc gcagccgcgc cggcggtccg
      661 ggcgggcagc ggggggccag gcccgcgacg gcggccgcga tcgcggcggt gtgggccggc
      721 gtcgacccgc agcagcttcc ggccacgttc aggagcccgt cctcggcgaa ggcgcgcagc
      781 agccgggccg tgacctcggg cgtctcgtcg taacccccga acgcgttggg caggccggcg
      841 ttggggtggg cgctgaccag gcaaggcgcg gccctggcca gctccacgag gtagggccgg
      901 atctcgctcg cccccagcga gcagttgacc ccgacgatca gcggctcggc gtgggcgatc
      961 gaggtccaga acgcctcgat cgtctgcccc gacagggtcc ggcccgagcg gtcgacgatc
     1021 gtcgccgaga tccagagcgg gagctcgggg acgacctcgc gcgcggcgac cacggccgcc
     1081 ttggcgttga gggtgtcgaa cacggtctcg atcaccagca ggtcgacgcc gccctcggcc
     1141 agggcgtgca tctgctcgca gtaggcctcc ttgacctgtt cgaagctggc gcggcgaaag
     1201 cccgggtcgt cgaccgaggg gctgagcgac aaggtgacgt tgagcggccc gaccgagccg
     1261 gcgaccaggc gatccccggc ggcctcccgg gcgaggcggg cgccggcgag gttgatctcg
     1321 gtcacgtggt gctcgaggcc gtagtcggcc tgggcgatcg cggtggcggt gaaggtgttg
     1381 gtggtggtga tgtctgctcc ggccgcgagg tagcgctcgt ggatcgacag caccagatcg
     1441 ggccgggtga ggttgaggac gtcggggtcg ccggtgaggt cgacggggtg gtcggagaag
     1501 cggtcgccgt ggtaggcctc gcgacccagg cgcgcctcct ggagcatcgt cccccaggcg
     1561 ccgtcgagca cgaggatccg ctcccccgcc atccgcccta tctccgccgc cacgtcccgc
     1621 cggcccacgc gccacctcca ccttttcggg gaataccagg aacatagcgc ggcccacccc
     1681 cgccgccgcg tcccccgggg tcccggcgcc cgaaggcgtg cgcggaggat ctgatagacg
     1741 tcaccggcgg cctccgacgg cgtccgggtc gtggcgccgc gcccgtcccg agtgccgtgc
     1801 gagtcctgac ctcccccgaa accgcgctgt cgcccgagct ccgccgccag gttgcgtcgc
     1861 tcgagcacca ggcctggccg agcatcgacc cgcgactcgg acacctgcac gacccggcgc
     1921 tggagccgct gtcgatgctc ctggtcgacg gcgaccgggt cgtggctgcg ctggcggtgc
     1981 tctcgaaggc gctcgctcac cggggccgga cctacgccgc ccgcgggctc agcaccgtgg
     2041 tcaccgaccg gtcgctgcga cggcgaggcc acggcctggc gctcgtcacc gccgcacgcg
     2101 agctcatcgc tgccagccgc gccgacctcg ggctgttcac ctgcgacccg cccttgcagg
     2161 ggttctacga gcgggcgggc tgggaggaac tgcccgacgc cgtcgtcgtc ggtggcaccc
     2221 cggaggcgcc gcttgccagc gacacgctgg gcaaggtcac gctggcaggg ttcttctcgc
     2281 cgcaggcccg aca
//
LOCUS       DATGJT010000381         5059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1398020, whole genome shotgun sequence.
ACCESSION   DATGJT010000381 DATGJT010000000
VERSION     DATGJT010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5059
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398020"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..672
                     /locus_tag="VKX24_06535"
     CDS             <1..672
                     /locus_tag="VKX24_06535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08176.1"
                     /translation="DFLRDHPELTLPFPLSMYEEFMLHIDDYVVGYSISQARLAAESL
                     GVGAYVFCGFSENLMLGALPEIGKGLGFTFNELPDGRRFAQGLPGVFQGYGMPAPWWD
                     SVDQLVDTVVNFRYNKQGVFFGEGSGSGSSMDNAPYNAETLREIRKNDRLNYKPWAIE
                     AAKRDIQHCLDKYGRYPVHYAPMQCNHIIQLQHVDTDYYDKYHVPGYMNDRIRTHDES
                     WHNHR"
     gene            674..952
                     /locus_tag="VKX24_06540"
     CDS             674..952
                     /locus_tag="VKX24_06540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015349429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HLJ08177.1"
                     /translation="MSVSVRIPASLAFLCEGARRIEADGSTVAEVLVDVRRRFPALGI
                     RLCDEAGTPATFVRVFVEDETDVRALQGADTPVRTEITLHVLAGAAGG"
     gene            1081..1344
                     /locus_tag="VKX24_06545"
     CDS             1081..1344
                     /locus_tag="VKX24_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08178.1"
                     /translation="MTLGEVWENLHATYPDLMWRLSEGPTRPSFWVRVTVDGRAAEHP
                     TRLDLPLSDGAELALHILPGSGVAAGAASGKPPTTAACAASRG"
     gene            1323..2372
                     /locus_tag="VKX24_06550"
     CDS             1323..2372
                     /locus_tag="VKX24_06550"
                     /inference="COORDINATES: protein motif:HMM:NF014042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043743 - LPPG:FO 2-phospho-L-lactate
                     transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase CofD family
                     protein"
                     /protein_id="HLJ08179.1"
                     /translation="MRRQPGLMLDGPRVAVLCGGFGAARFVPALAASAGTLCCVVNTA
                     DDLDHLGLHISPDVDSVCYALAGRFDEGRGWGLIGDTFNAVDALARHGSGWFRIGDED
                     LAFSLLRSARLRQGVTLTAATARLTEALAVAATVLPMSDDPVRTIVHTDAGTLDFQDY
                     LIRHRARPSVHRVEYRGLATAQPAPGVLAALNNADVVVVAPSSPVASIIPILRLPGVL
                     DTLRHRGGPTVAVAPVVSNQPPGAAPERSRAVVRSALMGSLGLAHRAAEVAGLYASFL
                     DGFVLDERDADQLALIERTGVAVLTADTLSPPERRPALAEAVVRFAGSLSHRRQNRSP
                     LTTTISLVQMEHGFC"
     gene            complement(2433..4469)
                     /locus_tag="VKX24_06555"
     CDS             complement(2433..4469)
                     /locus_tag="VKX24_06555"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HLJ08180.1"
                     /translation="MEMKGTWRVARREYRAYLSAPWCYGIAAAFLALTGVTFFVVTDA
                     AREASLRLWFPNLAFVSTVTMPVVTSRTVAEERRMRHLDVLLARPVSTAALVVGKWLG
                     VVFLFLTFLAPSATYVAVLAAWGRPDWPPIVTSYIGAVAIAALFAALGTLTSVLTATP
                     ILAGLAGFAVLIGLQLGGGAPVVRSLSYVDHLDAFARGAPHLADAVYFVTATVFCLGA
                     ATLWQTVRRSSVRLSKLVAPTVALAVVASANWAIIPLDRTVDVTATGRFTLSRASREA
                     LANQPGAVSITAFEPANSPLAKDDTILFRQLRSLKHNLHSRVLDLDRDQGEALRLGVD
                     NYSEAAVEVQSRREVVSPITELSIVSALERLARRRPQTVCALTGHGERSLQDTAPAGY
                     STARDAIGINGASTREIDLTADQRIPPDCTILGLFDPKSSLRQAEIDAIGGFLDRDGK
                     LLVTVEPGGPDLSALTRPFGLRVLPGMVIDPSRSVAGDPTALLVNKFPAASPLTRDVA
                     GVAVPTAGGITTAASPDRGLVVSPVMASSDTSWLSLDPATRRNQPDQGDRGGPVVLAG
                     AADRSRVVSTGEQRVPSGGPKIDRTRLLVVADADWASNAVVGELANQTLLANAVNWLA
                     GEEDLVAVRGIQTDLRRLALTSSRRRLMGVITVGAVPGLALAAGAALWLRRRRR"
     gene            complement(4460..>5059)
                     /locus_tag="VKX24_06560"
     CDS             complement(4460..>5059)
                     /locus_tag="VKX24_06560"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08181.1"
                     /translation="NGAGKSTLLRRMAGVLPSQAGSVAVAGTGDPAEELTARGRIGYL
                     PEAPALYPDETVLRYVTYLADLAGVPGRRRRPAALEALERTGAAKLAERLAGRLSKGQ
                     RQRVAMAGAIVHDPDVILLDEPGEGLDPRQTVALRALLRELATGAAVLFSTHLLSEAQ
                     VTCDRIVILDQGCVVADRQPSDGDDLESAFLTVVGKGWR"
BASE COUNT          747 a         1783 c         1824 g          705 t
ORIGIN      
        1 gacttcctcc gggaccaccc cgagctcacg ctgccgttcc cgctgtcgat gtacgaggag
       61 ttcatgctcc acatcgacga ctacgtcgtc ggctactcga tcagccaggc ccgcctggcg
      121 gccgagtccc tcggcgtcgg cgcctacgtc ttctgcggct tctccgagaa cctcatgctc
      181 ggcgccctgc ccgagatcgg caagggtctc ggcttcacgt tcaacgagct gcccgacggc
      241 cgccgcttcg cccagggact gcccggcgtg ttccagggct acgggatgcc cgccccctgg
      301 tgggactcgg tcgaccagct cgtcgacacc gtggtcaact tccgttacaa caagcagggc
      361 gtcttcttcg gggaaggcag cgggtcgggt tccagcatgg acaacgcccc ctacaacgcc
      421 gaaacgctca gggagatccg caagaacgac cggctgaact acaagccgtg ggccatcgag
      481 gcggccaagc gggacatcca acactgcctc gacaagtacg gccggtaccc ggtccactac
      541 gccccgatgc agtgcaacca catcatccag ctccagcacg tggacaccga ctactacgac
      601 aagtaccacg tgccgggcta catgaacgac cggatccgca cacacgacga gtcgtggcac
      661 aaccaccggt gagatgagcg tttcggtccg catcccggcg tcgctggcct tcctctgcga
      721 gggggcccgg cggatcgagg ccgacggctc gaccgtcgcc gaggtcctcg tcgacgtccg
      781 ccgtcgcttt ccggccctcg ggatccgcct ctgtgacgag gccggtaccc cggcgacgtt
      841 cgtccgggtc ttcgtcgaag acgagacgga cgtccgggcg ctccaggggg cggacacccc
      901 ggtgcggacc gagataacgc tgcatgtcct ggccggtgcc gccggggggt aggccgctgg
      961 gcctatcccc cgggaccggc cgaacgaact tcagggggag gatcaatgac ggtgtccgtt
     1021 cggatacccc acggtctgac gtggacaacc ggtggccggg agtgggtcga agtcgacggt
     1081 gtgacgctcg gagaagtgtg ggagaacctc cacgccacct atccggacct gatgtggcgc
     1141 ctcagtgagg ggccgacccg gccgagcttc tgggttcggg tcacggtcga cggacgggcc
     1201 gccgagcacc ccacccggct ggacctgccg ctgtccgacg gcgcggagct cgccctgcac
     1261 atcctgccgg gcagtggcgt cgccgccggc gcggcatcgg gaaagccgcc gacgacggcg
     1321 gcgtgcgccg ccagccgggg ctgatgctcg acggcccccg ggtcgccgtc ctctgcgggg
     1381 ggttcggagc ggcgcggttc gtccccgcgc tggccgcatc ggccggcacg ctgtgctgcg
     1441 tcgtgaacac cgccgacgac ctcgaccatc tcgggctcca catcagtccc gacgtcgaca
     1501 gcgtctgcta cgccctggcc ggccggttcg acgaaggacg gggctggggc ctgatcggtg
     1561 acaccttcaa cgccgtcgac gccctcgccc gccacggttc cggctggttc cgcatcggcg
     1621 acgaagacct cgccttcagc ctgctccgca gcgcccgact gcgccagggg gtgaccttga
     1681 ccgccgcgac cgcccgtctc accgaggcgc tcgccgtggc cgccaccgtc ctgccgatga
     1741 gcgacgaccc ggttcggacc atcgtccata ccgacgccgg gacactggac ttccaggact
     1801 atctgatccg tcaccgggcc cggccctccg tgcaccgcgt cgagtaccgg ggtctcgcca
     1861 cggcgcagcc cgcaccgggg gttctcgccg ccctgaacaa cgccgacgtc gtcgtggtcg
     1921 ctccgagcag cccggtagcc agcatcattc cgatcctgcg cctccccggt gtcctcgaca
     1981 cgctgcggca ccgtggcgga ccgacggtcg ccgtcgcccc ggttgtctcg aaccaacccc
     2041 ccggcgccgc cccggaacga agccgggccg ttgtgcggtc ggcgctcatg ggctcgctcg
     2101 gtttggcgca ccgggccgcc gaggtggccg gcctctacgc ctcgttcctg gacggcttcg
     2161 tcctcgatga gcgcgacgcc gaccagttgg ccctgatcga gcggacgggg gtggcggtgc
     2221 tgacggccga cacgttgtcg ccgccggagc gccgccctgc cctggcggaa gcggtagtcc
     2281 gcttcgccgg atcgctatcg catcgtcgac aaaaccggag tccgctcacg acgaccatca
     2341 gtctggtgca gatggaacac ggcttttgct gagggttcat cgcatcgcct tcctgcttga
     2401 tcgaaatgtc gtcgcggctc cggcccggcg gttcagcggc ggcgacgacg aagccacagg
     2461 gccgcccccg ccgccaacgc cagacccggc accgccccga ccgtgatgac acccatcagc
     2521 cgccggcggg acgaggtcag cgccagacgg cggagatctg tctggatgcc ccggacggcg
     2581 accaggtcct cctcgccggc cagccagttc acggcgttgg ccaggagcgt ctggttggcc
     2641 agttcgccga cgacggcgtt ggaggcccag tcggcgtcgg ccaccaccag caggcgggtc
     2701 cggtcgatct tcggcccgcc ggaggggacg cgctgctccc ccgtcgagac gacgcgggac
     2761 cggtcggcgg caccggccag caccaccggg ccgccccggt caccctggtc gggctggttg
     2821 cgccgggtgg ccggatcgag cgacagccag gaggtgtcgc tcgatgccat caccggcgag
     2881 acgaccaggc cacggtcggg gctggcggcg gtggtgattc caccggcggt ggggacggcg
     2941 acgccggcga cgtcccgggt cagcggggac gccgccggga acttgttgac gagcagggcg
     3001 gtcgggtccc cggcgacgct gcgggacggg tcgatgacca tgcccggcag gacccgcagc
     3061 ccgaagggtc tggtcagcgc cgaaaggtcg gggccgccgg gttccaccgt gacgagcagc
     3121 ttcccgtccc ggtcgaggaa cccgccgatg gcgtcgattt cggcctgacg caggctgctc
     3181 ttgggatcga acagccccag gatcgtgcag tcggggggga tccgctggtc ggcggtgagg
     3241 tcgatctccc gggtggaggc gccgttgatg ccgatggcgt cccgagccgt ggagtacccg
     3301 gccggcgccg tgtcctgcag ggaccgttcg ccgtgcccgg tgagggcgca taccgtctgg
     3361 ggacggcggc gcgccaggcg ttccagcgca ctgacgatgc tgagttcggt gatcggagac
     3421 actacctccc ggcgggactg cacctcgacc gccgcctccg agtagttgtc gacgccgagg
     3481 cgcagcgcct caccctggtc ccggtcgagg tcgagcaccc gggagtggag gttgtgcttg
     3541 aggctgcgca gctggcggaa caggatcgtg tcgtccttgg ccaggggtga gttggccggt
     3601 tcgaaggccg tgatcgagac ggctcccggc tggttggcca gcgcttcccg ggaggcccgg
     3661 gacagcgtga accggccggt ggcggtcacg tcgacggtgc ggtccagggg gatgatcgcc
     3721 cagttggcgg aggcgacgac ggccagcgcc accgtcggcg ccacgagctt cgagagccgg
     3781 acggagctcc ggcgcacggt ctgccacagc gtggcggcac cgagacagaa caccgtggcg
     3841 gtgacgaagt agacggcgtc ggccaggtgg ggggcgcccc gggcgaaggc gtcgaggtgg
     3901 tcgacgtagg acagggaccg aacgacggga gcaccgccgc cgagctggag gccgatgaga
     3961 acggcgaagc cggccaaccc ggccaggatg ggcgtggccg tgaggacgct ggtcagcgtc
     4021 cccagggcgg cgaacagcgc ggcgatggcg acggcaccga tgtacgacgt cacgatcgga
     4081 ggccagtcgg gtcggcccca ggcggcgagg accgccacgt aggtggcgct cggagccagg
     4141 aaggtcagga agaggaacac gaccccgagc cacttgccca ccaccagggc ggcggtgctc
     4201 accggccggg ccagcagcac gtcgaggtgg cgcatccgcc gttcctcggc caccgtccgg
     4261 ctggtcacga ccggcatcgt gacggtgctg acgaaggcga ggttcgggaa ccacagccgc
     4321 agcgacgcct cccgggcggc gtcggtcacg acgaagaacg tgacgccggt cagcgccagg
     4381 aaggcggcgg cgatgccgta gcaccacggc gcggacaggt aggcccggta ttcgcgccgg
     4441 gcgacccgcc aggttccctt catctccatc ccttccccac caccgtcagg aacgccgatt
     4501 cgaggtcgtc gccgtcggag ggctgccggt cggcgaccac gcaaccctgg tcgaggatca
     4561 cgatccggtc gcaggtgacc tgggcctccg acaggagatg ggtgctgaac aggacggcgg
     4621 cgccggtggc gagctcccgg agcagcgccc ggagggcgac ggtctggcgg ggatcgagcc
     4681 cctcgccggg ctcgtcgagg aggatgacgt cggggtcgtg gacgatggcg ccggccatcg
     4741 ccacccgctg ccgctggcct ttggacagcc ggcccgcgag gcgctcggcg agcttggccg
     4801 cgccggtccg ctccagggcc tccagggccg ccgggcgccg gcgccgcccg gggactccgg
     4861 ccagatcggc caggtaggtg acgtagcgca ggaccgtctc gtcggggtac agcgccggcg
     4921 cttccgggag gtatccgata cggccccggg ccgtgagctc ctcggccggg tcaccggtgc
     4981 cggccacggc cacggagccg gcctggcttg gaaggacacc ggccatgcgg cgcaggagcg
     5041 tcgacttgcc ggcgccgtt
//
LOCUS       DATGJT010000382         3232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_569174, whole genome shotgun sequence.
ACCESSION   DATGJT010000382 DATGJT010000000
VERSION     DATGJT010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_569174"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VKX24_06565"
     CDS             <1..528
                     /locus_tag="VKX24_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08182.1"
                     /translation="VLTLAVLLPAVRVRAGAFPLDDEKHTECFIDKDDVLSPGLSLSP
                     SSGTAVTPAPGTIECHGKLNGHDPTGDGQVTEQARYGTKDPDTCQSGGEGDGRFDISV
                     PTNGGLQTFTLLFTFTYGEPSTRGGVVAGKFSGKGFHGTFDVTPKEGDCVTKPVTRIH
                     TVDEIEFEDGFFARS"
     gene            599..1183
                     /locus_tag="VKX24_06570"
     CDS             599..1183
                     /locus_tag="VKX24_06570"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ08183.1"
                     /translation="MLVRWPSEAEQRDRLAERHIPRLLLVDDGVPPPNLLDCLEDWIR
                     LPAPESDVRARIEGLRGRSRAHVRTVPEIDGHGVLRFGASWVSLPPVEARLADALVVR
                     FGAVVGRDTLRRSVWPGSAPGRNVLDVHVLRLRRRLAPLGLAIRTVRSRGYMLERAEP
                     PDGMVPLLAAAPPPDEEDVVLDEDAGLQVGLPAS"
     gene            complement(1159..2520)
                     /locus_tag="VKX24_06575"
     CDS             complement(1159..2520)
                     /locus_tag="VKX24_06575"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ08184.1"
                     /translation="MPAPRRRLLADIAPLRDSADFRRLYVGQLVSFLGSQLAVVAVPY
                     QVFLLTRSSFQVGLVSLAQLGPLLVGSLVGGAVADRMDRRRLLMVMQVAQALTSAALA
                     LNALHGLGALWPIYVSTAVATALSGVDRPARSASVPNVVDRRQLAAAYALWQILLQVG
                     AVAGPALAGVLLARFSLALLYWLDALSFGAAFVTVGRMGPLPPGEPGRAGADGDGAGA
                     DGDGAGAAPMLSGAPAPERPGRGRGSVFEGVRYAWRRQELIGVFVIDLDAMIFGLPRA
                     VFPALAQNVFRGGPATYGLLSAAPGAGALVGALTTGWVASVRRQGMAVIVAVAAWGAT
                     MTLFGAVTSLWLALLFLALAGAADVISAVFRNTILQTIVPDSLRGRLSALQIAVVSGG
                     PRLGDAEAGAAAAVGGARFAVVSGGVACLAGVAAVAAWLPRFRSFETRPEPEGAQEAG
                     RPT"
     gene            2800..>3232
                     /locus_tag="VKX24_06580"
     CDS             2800..>3232
                     /locus_tag="VKX24_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013225647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression protein HypE"
                     /protein_id="HLJ08185.1"
                     /translation="MASAKTLEEGVVHILWMQGGLSCDGDSVALTAATQPSIEEIALG
                     ALPGLPKIAVHWPLIDFECGPEQGADNFIEWFHMADRGELDPFVLVVEGSVANEAIKR
                     EGYWTGFGNNPETGQPITHAEWLDRLAPKATIILAVGTCATY"
BASE COUNT          491 a         1219 c         1133 g          389 t
ORIGIN      
        1 gtcctcacgc tggccgtcct cctgcccgcc gtccgggtcc gggccggggc gttcccgctc
       61 gacgacgaga agcacacgga gtgcttcatc gacaaggacg acgtcctctc tcccggcctg
      121 tcgctcagcc ccagctccgg gaccgccgtc acgccagccc ctgggactat cgagtgccac
      181 ggcaagctca acggccacga cccgaccggc gacgggcagg tcaccgagca ggcccgctac
      241 ggcaccaagg atcccgacac ctgccagagc ggcggggagg gcgacggccg gttcgacatc
      301 agtgtcccca ccaacggcgg cctccagacg ttcaccctgc tcttcacctt cacctacggg
      361 gagccgtcca cccggggcgg cgtcgtggcc ggcaagttct ccggaaaggg cttccacggc
      421 acgttcgacg tcactcccaa ggagggcgac tgcgtgacga agccggtgac caggatccac
      481 accgtcgacg agatcgagtt cgaggacgga tttttcgccc gatcgtgaag cgcgcagggt
      541 tcacagccgt gtaacagatc ggcaacgatc gactcttacg ttggctgtcg tggacgtgat
      601 gttggtgcgg tggccgtcgg aggccgaaca gcgcgaccgc ctcgccgagc ggcacattcc
      661 gaggctgctg ctggtcgacg acggcgtccc gccgcccaac ctcctcgact gcctggagga
      721 ctggatccgc cttcccgccc cggagtccga cgtccgggcc cgcatcgagg gcctccgcgg
      781 ccgcagccgg gcccacgtcc gcaccgtgcc cgagatcgac ggccacggcg tcctgcggtt
      841 cggggccagc tgggtgtcgc tgccgccggt cgaggcccgc ttggccgacg ccctcgtcgt
      901 ccggttcggg gcggtggtgg ggcgcgacac cctccggcgg tcggtctggc cggggagcgc
      961 cccgggccgc aacgtcctcg acgtccacgt cctgcgcctc cggcgccggc tggcgcccct
     1021 cggcctggcc atccggaccg tccgctcccg gggctacatg ctggagcggg cggagccgcc
     1081 ggacgggatg gtcccgttgc tcgccgccgc tcctccaccc gacgaggagg acgtcgtcct
     1141 cgacgaggac gccgggcttc aggtcggtct tcccgcttcc tgagccccct cgggctccgg
     1201 acgggtctcg aacgaccgga accggggcag ccaggcggcc accgccgcca ccccggccag
     1261 gcaggccacc ccgcccgaca ccaccgcgaa ccgggcgccg cccaccgccg ccgccgctcc
     1321 ggcctcggcg tcgccgaggc ggggcccgcc gctgaccacg gcgatctgca gtgccgagag
     1381 ccggccccgc agggagtcgg gcacgatggt ctggaggatg gtgttgcgga agacggccga
     1441 gatcacatcg gccgcgccgg ccagggccag gaacagcagc gccagccaca acgaggtgac
     1501 ggccccgaag agcgtcatgg tggcccccca ggccgccacc gccacgatga ccgccatccc
     1561 ctgccggcgg accgacgcca cccagcccgt cgtcagcgcg ccgaccagcg ccccggcccc
     1621 gggggcggcc gacagcaggc cgtaggtcgc cggcccgccc cggaagacgt tctgggcgag
     1681 agccgggaac acggcccggg gcaggccgaa gatcatggcg tcgaggtcga tgacgaagac
     1741 gccgatgagc tcttggcgcc gccaggcgta ccggacgcct tcgaagaccg agccccgccc
     1801 ccgcccgggc cgctcggggg ccggcgcacc ggacagcatc ggggcggccc cggcgccgtc
     1861 cccgtcggcc ccggcgccgt ccccgtcggc cccggcgcgg ccgggctcgc cgggcggcag
     1921 cggccccatc cgcccgacgg tcacgaaggc ggcgccgaag ctcagggcgt cgagccagta
     1981 gagcagcgcc agcgagaacc gggccagcag gacgccggcc agcgccgggc cggccaccgc
     2041 ccccacctgg agcaggatct gccacagggc gtaggccgcg gccagctgcc gccggtcgac
     2101 gacgttgggg acggaggcgc tgcgggccgg ccggtcgacg cccgacagcg ccgtcgccac
     2161 cgccgtcgac acgtagatcg gccacagcgc cccgaggccg tggagggcgt tgagcgccag
     2221 cgccgcgctg gtcagcgcct gggccacctg catgaccatg agcagccgcc ggcggtccat
     2281 ccggtcggcc accgctcccc ccaccagcga gcccaccagc agcgggccga gctgggccag
     2341 actgacgagg ccgacctgga acgacgaccg ggtcagcagg aacacctggt aggggacggc
     2401 gacgacggcc agctgcgacc cgaggaacga cacgagctgc ccgacgtaga gccggcggaa
     2461 gtcggccgag tcccgcagcg gcgcgatgtc ggcgagcagt cggcggcgcg gcgcgggcat
     2521 ggcccgccga cgctacccgg cgccggattt tcctgaatga acggcggctc gaccccgtca
     2581 ttaccgcgcg gtcagtcgga cggcgatcgg tgcaagcact cctccccctg tcgggcgaaa
     2641 gtgcaggtca gaggcgcagt aggtcaacgc tcgatgcggg tattcggccg ctatgtgcgc
     2701 cgcgcaccta gaagaattct caccagtcac ttcccttttt ccaacggccg gtcataaggt
     2761 gacccgagct cgtacgagcg tcaggggggt ggtgccggga tggcaagtgc caagacgttg
     2821 gaagaaggcg tcgtccacat cctgtggatg cagggcggcc tgagctgcga cggggactcc
     2881 gtggccctca ccgcggcgac gcagccgagc atcgaggaga tcgccctcgg ggcgctcccc
     2941 gggttgccga agatcgcggt ccactggccg ctcatcgact tcgagtgcgg ccccgagcag
     3001 ggtgccgaca acttcatcga gtggttccac atggccgacc gcggcgagct cgatcccttc
     3061 gtgctcgtcg tcgagggctc ggtggccaac gaggccatca agcgggaggg gtactggacc
     3121 ggcttcggca acaaccccga gaccggccag cccatcaccc acgccgaatg gctcgaccgg
     3181 ctggcgccca aggccacgat catcctggcc gtcgggacct gcgccaccta cg
//
LOCUS       DATGJT010000383         2206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_672908, whole genome shotgun sequence.
ACCESSION   DATGJT010000383 DATGJT010000000
VERSION     DATGJT010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672908"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1271
                     /locus_tag="VKX24_06585"
     CDS             <1..1271
                     /locus_tag="VKX24_06585"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ08186.1"
                     /translation="AGGVVTTLNPLLTGREASEQVRHSRAKLLLVDDASDDKGDEDAL
                     TTGCPSLALERLWATDGHDELPQPGPEFDPATDLAALPYSSGTTGVAKGVMLTHRNLV
                     ANLAQFAPMWPYRADDVVCAVVPMAHIYGMNVIMNLALASGSAIVTLPRFSVEAYLGA
                     VERFGVTRLHLAPPMVLQLVNSDVAAFDLSSVRWAVSGAAPLDAELAARFEQKFGVPV
                     AQGYGMTEASPGTHLVPERDQGRAPAGSVGWLMPNTECRLVDPASGTDSDSEGELWIR
                     GPQVMAGYLEDPVATAQALSDDGWLRTGDIGRYEDGAYFIVDRLKELIKYKGHQVAPA
                     ELEALLLTHPGVADAAVVGVPDQDAGEVPKAFVVPAGDLDPQDLLAWVSARVAPYKRI
                     RAVEVVETIPKSPSGKILRRVLRDRVQAAP"
     gene            1280..2140
                     /locus_tag="VKX24_06590"
     CDS             1280..2140
                     /locus_tag="VKX24_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018680267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLJ08187.1"
                     /translation="MRVHELAAIDVHTHVHRSVAAPPGPQAEDALFAYFGGDIVHPSV
                     PDLAAYYRQRKMACVAFTIDATTATGRPPAVSNEEIADLAAENADVVIPFASIDPHAG
                     AAGAARVRTLVEHHGVRGFKFHPNVQAFFPGDRAYYPLYEAMAETGLPVVFHTGHTGV
                     GAGQPGGGGIRLKFSNPMAVDDVAVDFPEMPIVLAHPSFPWQDEAISVALHKTNVYID
                     LSGWSPKYFPANLVQYANTLLKEKVLFGSDYPVITPDRWLADFEQLPIKPEVRPLILK
                     ENAVRLLGLG"
BASE COUNT          337 a          802 c          741 g          326 t
ORIGIN      
        1 ccgccggcgg cgtcgtgacg acactcaatc cactgctcac cgggcgtgag gcgagcgagc
       61 aggtccgcca ctcccgggcc aagctcctcc tcgtcgacga tgcctcggat gacaagggcg
      121 acgaggacgc gctgacgacc ggctgcccgt cgctcgccct ggagaggctg tgggccacgg
      181 acggccacga cgagctgccg cagccgggac ccgagttcga cccggccacc gacctggccg
      241 cgctccccta ttccagcggc acgaccggtg tggccaaggg cgtcatgctc acccacagga
      301 acctcgtggc caacctcgcc cagttcgccc cgatgtggcc gtaccgtgcc gacgacgtcg
      361 tctgcgccgt ggtgcccatg gcccacatct acggcatgaa cgtcatcatg aacctcgcct
      421 tggcgagcgg gtccgccatc gtgacgctgc cccggttcag cgtggaggcc tatctcggcg
      481 cggtcgagcg gttcggcgtg acccgcctcc acctggctcc gccgatggtg ctgcaactgg
      541 tgaactccga cgtcgccgcc ttcgacctct cgtcggtcag gtgggccgtg tccggcgccg
      601 ccccgctcga cgcggagctg gcggcgcgct tcgagcagaa gttcggcgtg cccgtcgccc
      661 agggctacgg catgaccgag gcgagccccg gcacgcacct cgtgcccgag cgcgaccagg
      721 gccgagcccc cgccggatcg gtgggctggc tcatgcccaa caccgagtgc cggctggtcg
      781 acccggcctc gggcaccgac tcggacagcg aaggcgagct ctggatccgc ggcccccagg
      841 tcatggccgg gtacctcgag gaccccgtgg ccactgccca ggcgctcagc gacgacgggt
      901 ggctccggac cggcgacatc gggcgatacg aggacggcgc ctacttcatc gtcgaccggc
      961 tgaaggagct gatcaagtac aagggccatc aggtggcacc ggccgagctc gaggccctgc
     1021 tcctcacaca tccgggtgtc gccgacgccg ccgtggtcgg ggtgcccgac caggatgccg
     1081 gggaagtgcc gaaggccttc gtggtgccgg cgggcgacct cgacccccag gatctcctgg
     1141 cctgggtgtc ggcgcgggtc gccccctaca agcggatacg ggccgtcgag gtcgtcgaga
     1201 cgattcccaa gtctccatcg ggcaagatct tgcgcagagt gttgcgcgac cgggttcagg
     1261 cggccccatg agcggctcga tgcgagtcca cgagctggcc gccatcgacg tccacaccca
     1321 cgtgcaccgt tcggtcgccg ccccgccggg gccgcaggcg gaggacgccc tgttcgcgta
     1381 cttcgggggc gacatcgtcc atccgagcgt ccccgacctc gccgcctact accgccagcg
     1441 caaaatggcc tgcgtggcgt tcacgatcga tgccaccacg gcgaccggga gaccgcccgc
     1501 ggtcagcaac gaggagatcg cggatttggc ggcggagaac gccgacgtgg tcattccgtt
     1561 cgcctccatc gatccgcacg ccggtgcggc cggcgcggcc agggtgcgga cgctcgtcga
     1621 gcaccacggg gtgcgggggt tcaagttcca ccccaacgtg caggcgttct tccccggcga
     1681 ccgggcgtac taccccctct acgaggcgat ggccgagacc gggctcccgg tcgtcttcca
     1741 caccgggcac accggggtgg gggccggcca gcccggtggc ggtgggatcc ggctcaagtt
     1801 ctcaaacccc atggcggtcg atgacgtcgc cgtcgacttc cccgagatgc ccatcgtgct
     1861 ggcccacccg tcgttcccct ggcaggacga ggcgatctcg gtggcgctgc acaagaccaa
     1921 cgtctacatc gacctgtccg gctggtcgcc gaagtacttc ccggcgaacc tcgtccagta
     1981 cgccaacact ctgctgaagg agaaggtgct cttcgggtcc gactacccgg tgatcacccc
     2041 cgaccgctgg ctggccgact tcgaacagct gccgatcaag ccggaggtcc gcccactgat
     2101 cctgaaggag aacgccgtcc ggctcctggg gctcgggtaa cgagtcgggc cgtcctcgac
     2161 ggcgcccgtg aggaacaaca tcgagtcagc gtcggagacg gtgtcg
//
LOCUS       DATGJT010000384         2202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1398777, whole genome shotgun sequence.
ACCESSION   DATGJT010000384 DATGJT010000000
VERSION     DATGJT010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398777"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VKX24_06595"
     CDS             <1..336
                     /locus_tag="VKX24_06595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08188.1"
                     /translation="ALTDHITPWEACYRTNGILGGNTRFVLSSSGHIQAIVNPPGNKK
                     SSYRAADDPGAHSAAFLAAAEKIAGSWWEEWSAWLTARDGETRRAPRSLGDRRHPVLD
                     PAPGRYAAS"
     gene            333..1214
                     /locus_tag="VKX24_06600"
     CDS             333..1214
                     /locus_tag="VKX24_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ08189.1"
                     /translation="MTAASTTPPAGAGPEAAATAARDERIEMVPVGGLQLRVSLRPAQ
                     GSASGATRPPLLLCNGIGAPIEMWTPFRDRLGRPTIAFDAPGVGESSVPLIPPTIGGV
                     ARLLMQVLDQLGVPTVDVLGVSWGGALAQEVARHGGERVRRLVLCATMAGGAPIPGDP
                     RVLAILATPLRYWSPSYLDRVAPALYGPDVAENPEMMAHQRRARFTRAPSGRGYLWQM
                     LALRRFASVLWLHRLRQPTLVLSGVSDPIVPVANGRILAGRIPGARLEVVDGGHLFLL
                     THAEENAARVNGFLDSR"
     gene            complement(1434..>2202)
                     /locus_tag="VKX24_06605"
     CDS             complement(1434..>2202)
                     /locus_tag="VKX24_06605"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08190.1"
                     /translation="GGGRLEHRRLRGPDGRPGMNEPFPGDVPRRPGIRPGQPWGTEVS
                     GPADLEVAGGDGMLAAVLTRGLEDPLVRFAAAPESDLARAVGLVAGAVPGGLALPLDA
                     LELRPGDGGPAPPRVAVNSVVVGVAPDRLRAWHRPVGLAVHIDGAAVDAAGATTLVVM
                     NGQYLRGLDVSPRGHPGDAVAEAQLYGLRPGVRRAMRSRLATGAHLPHPAITVRKARL
                     VTVRAARPVPLEVDGEPAGRITALEVRLRPAAYRLFI"
BASE COUNT          268 a          854 c          814 g          266 t
ORIGIN      
        1 gccctcaccg accacatcac accgtgggag gcctgttacc gcaccaacgg gatcctgggc
       61 ggcaatactc ggttcgtgct ctcgtcctcc ggccacatcc aagccatcgt caacccgccg
      121 ggcaacaaga agtcgagcta ccgggccgcc gacgacccgg gcgcccacag cgcggcgttc
      181 ctggccgcgg cggagaagat cgccgggtcg tggtgggagg agtggtcggc ttggctcacc
      241 gcccgcgacg gtgagacgag gcgggcgccc cggtcgctcg gcgaccggcg ccatccggtg
      301 ctcgacccgg cccccggccg gtacgccgcc agttgaccgc cgcctcgacg acacccccgg
      361 ccggcgcagg gcccgaggcg gccgcgaccg ccgcccgcga cgagcgcatc gagatggtgc
      421 cggtgggcgg cctgcagttg cgcgtctcgc ttcggcccgc ccaggggtcg gcgtcgggcg
      481 cgacacgccc gcccctgttg ctgtgcaacg gaatcggggc cccgatcgag atgtggacgc
      541 cgttccggga tcggctgggc cggcccacga tcgccttcga cgcccccggc gtcggcgagt
      601 cgtccgtccc gctgatcccg ccgacgatcg gcggcgtcgc ccggctgctg atgcaggtgc
      661 tcgatcagct cggcgttccc acggtcgacg tcctcggcgt gtcgtggggc ggggcgctgg
      721 cgcaggaggt cgcccgccac ggaggcgagc gggtccgccg tctcgtgctg tgcgccacga
      781 tggccggcgg ggcaccgatc ccgggcgacc cccgggtcct ggccatcctg gccacgccgc
      841 tgcgctactg gtccccgtcg tacctcgacc gggtcgcccc cgccctctat ggccccgacg
      901 tggccgagaa ccccgagatg atggcccacc agcggcgggc ccggttcacc cgggccccct
      961 cgggccgggg ctacctgtgg cagatgctgg ccctgcgccg cttcgccagc gtcctgtggc
     1021 tgcaccggct ccgccagccg acgctggtgc tgagcggcgt ctccgacccg atcgtgccgg
     1081 tggccaacgg ccgcatcctg gccgggcgga ttcccggcgc ccgcctcgag gtcgtcgacg
     1141 gcggacacct gttcctgctg acgcacgccg aggagaacgc cgcccgggtc aacgggttcc
     1201 tcgactcccg ctgacggccg ccggccgcca gccgcggccg ccaacacgat tgctcgagcg
     1261 ccccagctca ccgttttccg gtcacgggcc tgccacatag gcggctccgc gcccggagaa
     1321 gccgccggtg ctagccctcg accgccagat cggtgagggc gatctcgatc aagcttcgcc
     1381 acgtcgtctg aagcgtccga gtgaccgacg gcgcttcccg ccgcgcccag cggtcagatg
     1441 aacaagcggt acgccgccgg acgcagccgg acctcgaggg cggtgatgcg gccggcgggc
     1501 tcgccgtcga cctcgagcgg aaccggccgg gccgcccgga cggtgacgag acgggccttc
     1561 cggacggtga tggcgggatg gggcaggtgg gcgccggtgg cgaggcggga ccgcatcgcc
     1621 cggcggaccc cgggccgcag tccgtagagc tgggcctcgg ccacggcgtc gccggggtgg
     1681 ccgcgggggc tgacgtcgag cccccggagg tactgcccgt tcatgaccac cagcgtggtg
     1741 gccccggcgg catcgacggc cgcgccgtcg atgtgcaccg ccagcccaac cgggcggtgc
     1801 caggcccgga gccggtcggg cgccacgccg accacgacgc tgttcaccgc cacccgcggc
     1861 ggggccggcc cgccgtcccc cggtcggagt tcgagggcgt cgaggggaag cgccagaccg
     1921 cccggcacgg cgccggccac cagcccgacg gcgcgggcca gatcggactc cggtgcggcg
     1981 gcgaagcgga ccaggggatc ctcgagcccc cgggtgagga cggcggccag catcccgtct
     2041 ccgccggcga cctcgaggtc ggcggggccg gagacctccg tcccccacgg ctggccgggc
     2101 cggatgcccg gacgccgggg gacgtcgccg gggaacggct cgttcattcc cggccggccg
     2161 tccgggcccc ggagccgacg gtgctcgagg cggccaccac cc
//
LOCUS       DATGJT010000385         2695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_154982, whole genome shotgun sequence.
ACCESSION   DATGJT010000385 DATGJT010000000
VERSION     DATGJT010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154982"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="VKX24_06610"
     CDS             complement(<1..290)
                     /locus_tag="VKX24_06610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08191.1"
                     /translation="MLCSSSVTADFSAATLPLSALVLAPSSTPRVGSAGAVVDVVVGG
                     SALGAWPVSSRRRAKAAAMIATQTTTATAKPVREEKKSRSRPGADDDMAGGAS"
     gene            268..1059
                     /locus_tag="VKX24_06615"
     CDS             268..1059
                     /locus_tag="VKX24_06615"
                     /inference="COORDINATES: protein motif:HMM:NF014237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HLJ08192.1"
                     /translation="MTELEQSIGRTLDIDNNFYPWDVPFPTDTERWDLQNGRIPMISW
                     NGKNVQAADIAAGRYDDMIKQRAKATKALGKPVLIRWFWEMDGNKKISFAGTPAQYVA
                     AWQHIVTVFRNQGAENVRWVWCPNASAFKDGTAQQFYPGDDFVDWIAADGYNWAPGRH
                     GDDYRPFKDIFEGFYGWASLKNKPIMVAETGVQERNPGEKAQWISDAREAIKNNFPLL
                     RALVYFDSDQDYDWELTTSASAVEAFKQMANDPWFNLGADGRVLK"
     gene            1197..1577
                     /locus_tag="VKX24_06620"
     CDS             1197..1577
                     /locus_tag="VKX24_06620"
                     /inference="COORDINATES: protein motif:HMM:NF022684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3040 domain-containing protein"
                     /protein_id="HLJ08193.1"
                     /translation="MPLSEDEQRILQEIEAQFYANDPQLAQQVSETTLYRHAARNIKW
                     AALGFIVGFVVLLTSFASSLFFGFVGFLAMLACAFVIVSNVRKMGKAGLESITASVKG
                     KRLKNIFGDAGKNLRRPFRKDDSS"
     gene            complement(1584..>2695)
                     /locus_tag="VKX24_06625"
     CDS             complement(1584..>2695)
                     /locus_tag="VKX24_06625"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HLJ08194.1"
                     /translation="SEIPRYTPADLQAAGGDPPADMQSYLELPDDFPADVRDLARKVT
                     GNAVGPYAQALALQDYLRSNYTYDEAAPAGHSDDHLRYFLFRSKIGYCEQFAGAYAAM
                     ARAIGLPARVAVGFTPGTYDAAQDVFHVTTKDAHAWPEVHINGVGWVAFEPTPGRFEP
                     NPTNYTGTYNPQANPVLATTTTTTSPAAAAAPGTPTTKPAKAENDPFQNDTQTSTGRS
                     LTWLVEVAVGVVVLALLLILPPALKRRRRTRRRRAGPARVRVAGAWSEALDRLREAGT
                     APAATATPMEFARAGARSVAVPADVGTPMTRLARIFTKASYSPGDPSEDEVTQAWAEV
                     ETLTRALDEGDSLLGRWRRRLNPATLLPRPSPSTT"
BASE COUNT          416 a          945 c          926 g          408 t
ORIGIN      
        1 gaggcccctc ctgccatgtc gtcgtcagcg cccggccggc tccgggactt cttctcctcc
       61 cgcaccggct tcgccgtcgc cgtcgtcgtc tgtgtggcga tcatcgccgc cgccttcgcc
      121 ctgcggcgcg acgacacggg ccacgccccg agcgccgagc caccgacgac gacgtccacc
      181 actgcgcccg ccgagcccac ccggggggtg ctgctcgggg ccagcaccag cgccgacagt
      241 ggcagcgtgg cggcggagaa gtcggcggtg accgagctcg agcagagcat cggccgcacc
      301 ctcgacatcg acaacaattt ctacccctgg gacgtgccct tccccaccga caccgagcgg
      361 tgggacctgc agaacggccg catcccgatg atcagctgga acggcaagaa cgtccaggcc
      421 gccgacatcg ccgccggccg ctacgacgac atgatcaagc agcgggccaa agccacgaag
      481 gccctcggca agcccgttct catccgctgg ttctgggaga tggacggcaa caagaagatc
      541 tccttcgccg gcaccccggc ccagtacgtc gccgcctggc agcacatcgt cacggtcttc
      601 cggaaccagg gcgccgagaa cgtccgctgg gtgtggtgtc ccaacgcctc ggccttcaag
      661 gacggcacgg cccagcagtt ctatcccggc gacgatttcg tcgactggat cgccgccgac
      721 gggtacaact gggcccccgg ccggcacggt gacgactacc gcccgttcaa ggacatcttc
      781 gagggcttct acggttgggc gtcgctcaag aacaagccga tcatggtggc cgaaaccggc
      841 gttcaggaac gcaatccggg tgagaaggcg caatggatca gcgacgcccg tgaggcgatc
      901 aaaaacaact ttcccctgct gcgcgctctc gtctatttcg acagcgacca ggactacgat
      961 tgggaactca ccacgtcggc ttcggcggtc gaggccttca agcaaatggc caatgacccc
     1021 tggttcaacc tgggtgccga tgggcgggtc ctgaaatagg cccgccgggg cgaggtccgg
     1081 cccccgtccg tccgccgcta cggtgctggt gggccgcatt gttcgctccc gaggcgctgt
     1141 gcgacaatga agttccctgg acaggtaggg ctcgagccgg tatggaagtg gaaccgatgc
     1201 cgctctccga agacgaacag cgaatcctcc aagagatcga ggcgcagttc tacgccaacg
     1261 atccgcagct cgcccagcaa gtctcggaga ccaccctcta ccgccacgcc gcccgcaaca
     1321 tcaagtgggc ggcactgggg ttcatcgtcg gcttcgtcgt cctgctgacg tcgttcgcct
     1381 cgtcgctgtt cttcgggttc gtcggcttcc tggccatgct ggcgtgcgcc ttcgtgatcg
     1441 tcagcaacgt ccgcaagatg gggaaggccg ggctggagag catcaccgcc tccgtcaagg
     1501 gcaagcggct caagaacatc ttcggcgacg ccgggaagaa cctgcgccgc cccttccgca
     1561 aagacgacag cagctagaag ccgctacgtc gtcgaaggcg aaggccgcgg caggagcgtg
     1621 gccggattga gccggcggcg ccagcggccg agcagcgagt cgccctcgtc cagggccctc
     1681 gtcagcgtct cgacctcggc ccaggcctgg gtgacctcgt cttcggacgg gtcgcccggc
     1741 gagtacgacg ccttcgtgaa gatccgggcc aggcgggtca tcggagtacc cacgtcggcc
     1801 gggaccgcca ccgaccgggc gccggcccgg gcgaactcca tcggcgtggc cgtggccgcc
     1861 ggcgccgttc ccgcctcccg cagccggtcg agggcctcgg accaggcacc cgccacccgg
     1921 acccgggccg ggccggcccg ccggcgccgg gttcgccgcc gccgcttcag cgccggcggc
     1981 aagatcagca gcagggccag caccaccacc ccgaccgcca cctcgaccag ccacgtgagc
     2041 gaccggccgg tggacgtctg ggtgtcgttc tggaacgggt cgttctccgc cttggcgggc
     2101 ttcgtcgtcg gcgtgcccgg ggccgccgcc gcggcggggc tggtggtcgt ggtggtggtg
     2161 gccagcaccg ggttcgcctg ggggttgtag gtcccggtgt agttcgtcgg gttgggctcg
     2221 aagcgccccg gcgtcggctc gaaggccacc cagccgaccc cgttgatgtg gacttcgggc
     2281 caggcgtggg cgtcctttgt cgtcacgtgg aagacgtcct gcgccgcgtc gtaggtgccg
     2341 ggggtgaacc cgaccgccac ccgggccggg aggccgatgg cccgggccat ggcggcgtag
     2401 gcgccggcga actgctcgca gtagccgatc ttcgaccgga acaggaagta gcgcagatgg
     2461 tcgtcggagt gcccggccgg cgccgcctcg tcgtaggtgt agttgctgcg gaggtagtcc
     2521 tgcagggcca gagcctgggc gtaggggccg acggcgttgc ccgtcacctt gcgggccagg
     2581 tcccgtacgt cggccgggaa gtcgtccggc agctccaggt aggactgcat gtcggccggc
     2641 gggtcgcccc cggcggcctg gaggtcggcc ggggtgtagc gggggatctc cgact
//
LOCUS       DATGJT010000386         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_983361, whole genome shotgun sequence.
ACCESSION   DATGJT010000386 DATGJT010000000
VERSION     DATGJT010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_983361"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VKX24_06630"
     CDS             <1..678
                     /locus_tag="VKX24_06630"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HLJ08195.1"
                     /translation="VHHARENARGVREAISSEMWECLNATWLALRERRSPSAGANPSL
                     FFRFVKERAAIFVGVTDGTMSRDESWRFLTLGRALERIDMTCRLLSARWADAAGSAGW
                     VTTLRCCSAHEAYLRTYRRAVDVSLAAQFLLLDRHFPRSVYYTLDLAERRLAELTLRG
                     TPGGLHDDARRLVGRARTGLEFRPIDELLDDLPTVLAEVQSAGSAASAVVTARFFGST
                     SPLVWSA"
     gene            675..1517
                     /locus_tag="VKX24_06635"
     CDS             675..1517
                     /locus_tag="VKX24_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HLJ08196.1"
                     /translation="MSWVLRIEHQTRYHYRDEVQASYNEARMTPLTTDRQMTVESRLA
                     VEPRTQPYRYLDYWATVVDAFDIHVPHTDLALTATSVVETTEAPDQPPDPGWELLAAR
                     PVLDRMAEFLAPTTYVPSDPELTRLAVELRDGWGPGDTVDAVSRFVRRHLDYSPGVTE
                     VSSSALEALHGRAGVCQDYAHLSIALLRAAGVPARYVSGYLHPGKDARPGDTVSGESH
                     AWVEAWLGDWWAFDPTNGVPVGERHAVVGRGRDYADVPPLKGVHSGGTPDRLGVEVHI
                     TRLA"
     gene            1667..>2052
                     /locus_tag="VKX24_06640"
     CDS             1667..>2052
                     /locus_tag="VKX24_06640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08197.1"
                     /translation="MSLLRRTRRRAAVPGLTAVAAAVLAFVAPVAPVRAAGGATTSAP
                     APVNPPPGSAVPNFSSSAQHSWGTATDTRTGCYDTKVNPPLCFAQMVDAVAEIGGRVY
                     VGGEFTNMVDPSHGLAPASPALPYLAV"
BASE COUNT          252 a          789 c          721 g          290 t
ORIGIN      
        1 gtccaccacg cccgggagaa cgcccggggg gtcagggagg cgatcagctc ggagatgtgg
       61 gagtgcctca acgccacctg gctggcgctg cgggagcggc ggtcgccctc cgccggcgcc
      121 aacccctcgc tgttcttccg cttcgtgaag gagcgggccg ccatcttcgt cggcgtcacc
      181 gacgggacga tgagccgcga cgagtcctgg cggttcctca cgctggggcg ggcgctggaa
      241 cggatcgaca tgacctgccg gctgctgtcg gcccggtggg cggacgccgc cgggtcggcg
      301 gggtgggtga cgacattgcg gtgctgctcg gcccacgagg cctacctgcg gacctaccgt
      361 cgggcggtcg acgtctccct ggcggcgcag ttcctgctcc tcgaccggca cttcccgcgg
      421 tcggtgtact acacgctcga tctcgccgaa cgccgcctgg ccgaactgac gctgcgcggc
      481 actccgggcg gtctgcacga cgacgcccgc cgcctcgtcg gccgggcccg caccggcctc
      541 gagttccggc cgatcgacga gctgctcgac gacctgccga cggtgctggc cgaggtgcag
      601 tcggcggggt cggcggcgag cgccgtggtg acggcccggt tcttcggctc gacgtccccg
      661 ttggtgtggt cggcatgagc tgggtgctgc gcatcgagca ccagacccgg taccactacc
      721 gcgacgaggt gcaggcgtcc tacaacgagg cccggatgac cccgctcacc accgaccgcc
      781 agatgacggt ggagtcccgg ctggcggtcg agccccgcac ccagccctac cggtatctcg
      841 actactgggc cacggtggtc gacgccttcg acatccacgt cccccacacc gacctggccc
      901 tcacggccac gtcggtggtc gagacgacgg aggcgcccga ccagccaccc gacccggggt
      961 gggagctcct cgccgcccgg cccgtcctcg accggatggc ggagttcctc gccccgacga
     1021 cgtacgtgcc cagcgacccc gagctcacga ggctggccgt cgagctgcgc gacgggtggg
     1081 ggccgggcga caccgtcgac gccgtctccc gcttcgtgcg ccgccacctc gactactcgc
     1141 cgggcgtcac cgaggtgtcg agttcggcgc tggaggcgct gcacggccgg gccggcgtct
     1201 gccaggacta tgcccacctg tcgatcgccc tgctgcgggc ggcgggggtg ccggcccgct
     1261 acgtctcggg ctatctccac ccggggaagg acgcccggcc gggcgacacc gtctccggcg
     1321 agagccacgc ctgggtcgag gcctggctcg gcgactggtg ggccttcgat ccgaccaacg
     1381 gcgtccccgt gggcgagcgc cacgccgtcg tcggccgggg ccgggactac gccgacgtcc
     1441 cgccgctcaa gggcgtccac agcggcggga cgcccgaccg gctcggggtc gaggtccaca
     1501 tcacccgcct cgcctgagcc ggccccgcgc tgccctcctc accgccgacg cgacggcgcc
     1561 ggctcaaggg tcgtcaacgc gggcaggagg tggggacagt gcgggcgtat ctgtcgggga
     1621 agcccgctca ctttgtcgac ccccccatgg caaggagccc cccgagatgt cccttctgcg
     1681 ccgcacgcgg cgccgcgccg ccgttcccgg tctgacggcc gtggccgccg cggtcctcgc
     1741 cttcgtggcc cccgtcgcgc cggtccgcgc cgccggcggg gcgaccacct ccgctcccgc
     1801 tccggtgaac ccgccgccgg gttcggctgt ccccaacttc tcttcctccg cccaacacag
     1861 ttggggcacg gccaccgaca ccaggaccgg ctgttacgac accaaggtca acccgccgtt
     1921 gtgcttcgcc cagatggtcg acgcggtggc ggagatcggc gggagggtct acgtcggggg
     1981 cgagttcacg aacatggtgg acccgtcgca cgggctggct ccggccagcc ccgccctccc
     2041 ctacctcgcc gt
//
LOCUS       DATGJT010000387         3584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_464242, whole genome shotgun sequence.
ACCESSION   DATGJT010000387 DATGJT010000000
VERSION     DATGJT010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464242"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VKX24_06645"
     CDS             complement(<1..264)
                     /locus_tag="VKX24_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08198.1"
                     /translation="MPDTSEILEPAALAPRPGSSATPEVGSDGPVRVLLVEDDPGDAL
                     LVEELLSETDLDVELVRALSVADALPRLAAVDCVLLDLNLPDSF"
     gene            347..1369
                     /locus_tag="VKX24_06650"
     CDS             347..1369
                     /locus_tag="VKX24_06650"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03617 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HLJ08199.1"
                     /translation="MELDLYCTEPHPARIGEIARQTQAAGFAGLWVTEAAHNPYIASA
                     LAAEAADRLVIGTDVAIAFPRSPMVTAQAAWDLAALSGGRFILGLGTQVRAHLERRFS
                     VPGDRLAPRIREYIVALRAIFDAFARREKLRFEGEFHRFSLLTDFFDPGPIDVADPPI
                     YLAGVNDRMARVAGEVADGFCVHPLNSPEYLRAVVGPSIEEGAKQAGRDPGAVKVVAP
                     VFTIVGDPGPELDRQRDAVRLQVALYGTTPSYGRVFEVHGREDMTARLGAALRAGDQA
                     RLAAEIDDELLDAFSVTAPWDGLAGALRRRFDGLADRIFPYHAPGLSDPAVAERWRTV
                     AGEFRA"
     gene            1383..1619
                     /locus_tag="VKX24_06655"
     CDS             1383..1619
                     /locus_tag="VKX24_06655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08200.1"
                     /translation="MKGIGLAVGTALLAGAALFPPPALAAGAPPGGCHGHDRYQWSDG
                     RGGWYECQGGTPQHRGCPPGKTRHPAGDARGYCA"
     gene            complement(1784..2938)
                     /locus_tag="VKX24_06660"
     CDS             complement(1784..2938)
                     /locus_tag="VKX24_06660"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ08201.1"
                     /translation="MKTQEILANAVALRPRLREQAAENERLRRLGPDTVEGLRSAGAF
                     RLPMPAAWGGPEVDIVTQTEIIETLSAADGSAGWCAMIGSDSGFYSAFLDDAVGRELY
                     PDLDIVTAGGVVPAGRLDVDRAAGGYRLTGRFTFASGIHHAEVVAAGAVAVDDGAMVT
                     GPGGGPVWRVALMPRGDVDVIDTWHTTGLAGSGSCDYAAENLFIPAERTFAFADGAKR
                     DGPLYAWPGMFIANAPGVPLGIARDALDVAREIWIDKVILPDQRPARDDPRVRAAIAR
                     AEALVGSARSYHYDVLGSLWDTLVAGDPPTLDQRAALAGSFPHTFQTCREAVALLYEE
                     IGSQSVYRACPLDRHLRDLITIGQHIMGQNRMREMAGGMWLGGPSPLPVL"
     gene            complement(2953..3495)
                     /locus_tag="VKX24_06665"
     CDS             complement(2953..3495)
                     /locus_tag="VKX24_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08202.1"
                     /translation="MGHELAFVGANPAALLWDGDQATAFVSVWQVDWSQEGPGGAIVL
                     CRPGELRVLCDPPLLGRWLFDTFVTHFGELAHFDRPARPAVEQASVKIDVDLTAGLHA
                     SARDVTVHITGVLDRRRILDQGLRLGNVPWSLCNVYAPCRSARIEAGHAVVPGTPRIK
                     EGPPIGSSAFLAVAETWARL"
BASE COUNT          461 a         1299 c         1368 g          456 t
ORIGIN      
        1 gaagctgtcg gggaggttga ggtcgaggag gacgcagtcc accgccgcca gccggggcag
       61 cgcgtcggcc accgacagcg cccggacgag ctccacgtcg aggtcggtct ccgagagcag
      121 ctcctcgacg agcagggcgt caccgggatc gtcctccacg aggagcacgc gcaccgggcc
      181 gtcggaaccg acctcgggcg tggcgctcga ccccggcctc ggagcgaggg cggccggctc
      241 gaggatctcg gaagtgtccg gcattctcgt ggtccccgtg ctccgcaccc gctggtttga
      301 gcgcgttccc gggggagact agtcggcgcc gtaggctgcc ccgaccatgg aactcgacct
      361 ctactgcacc gagccgcacc ccgcccgcat cggcgagatc gcccgccaga cgcaggccgc
      421 cggcttcgcc ggactctggg tgaccgaggc ggcccacaac ccctacatcg cttcggcgct
      481 ggccgccgaa gccgccgacc ggctggtgat cggcaccgac gtcgccatcg cctttccccg
      541 cagcccgatg gtcaccgccc aggcggcgtg ggacctcgcc gctctgtccg gcgggcggtt
      601 catcctcggc ctcggcaccc aggtgagggc ccacctggag cggcgcttct cggtgcccgg
      661 cgaccggctg gcgccgcgga tccgggagta catcgtcgcc ctgcgggcca tcttcgacgc
      721 cttcgccagg cgggagaagc tccgcttcga gggggagttc caccgcttct cgctgctgac
      781 cgacttcttc gacccgggcc cgatcgacgt cgccgacccg ccgatctacc tggccggggt
      841 caacgaccgg atggcccggg tggccggcga ggtggccgac ggcttctgcg tccaccccct
      901 caactcgccg gagtacctcc gggcggtggt cgggccgtcg atcgaggagg gcgccaagca
      961 ggcggggcgc gaccccgggg cggtcaaggt ggtggcgccg gtcttcacca tcgtcggcga
     1021 ccccgggccg gagctcgatc gccagcgcga cgccgtccgg ttgcaggtcg ccttgtacgg
     1081 cacgacgccg tcctacgggc gggtgttcga ggtccacggc cgggaggaca tgacggcccg
     1141 gctcggcgcc gcgctgcggg ccggcgacca ggcccggctg gcggccgaga tcgacgacga
     1201 gctgctcgac gccttctccg tcaccgcccc gtgggacggg ctggccggcg ccctccgccg
     1261 ccgcttcgac ggcctggccg accggatctt cccctaccac gcccccggcc tgtccgaccc
     1321 cgcggtggcc gaacggtggc gtaccgttgc cggggaattc cgcgcctagg aggggccacg
     1381 acgtgaaggg gatcggtctg gcggtcggca ccgcgctcct ggccggtgcg gcgttgttcc
     1441 cgcccccggc gctcgccgcc ggggcgccgc ccggcggctg ccacggccac gaccggtacc
     1501 agtggtccga cggccggggc ggatggtacg agtgccaggg cggaaccccc cagcaccgcg
     1561 gctgcccgcc gggcaagacg cgccacccgg ccggagacgc gaggggctac tgcgcctgac
     1621 gtaggccggc ccgggaagcg ccgttctgcg ctgtgtcccg gcacgaccgg tcgtgcctga
     1681 ggccctcaca gggcccggaa gacaaccggt tgtgctgagg cgcacggtcc cccgggtcgg
     1741 cccgggaatc ggcgatcgag ggcggtcggg gttgagccgg cactcagagg acgggcaggg
     1801 gtgacggccc gcccagccac atgccgccgg ccatctcccg catccggttc tggcccatga
     1861 tgtgctggcc gatcgtgatg aggtcgcgga ggtgccggtc gagcgggcag gcccggtaca
     1921 ccgactggga cccgatctcc tcgtagagca gggccaccgc ctcccggcag gtctggaagg
     1981 tgtgggggaa gctgccggcc agcgccgccc gctggtcgag cgtcggcggg tcgccggcga
     2041 ccagcgtgtc ccacagcgag ccgaggacgt cgtagtggta gctgcgggcc gagccgacca
     2101 gggcctcggc ccgggcgatg gccgcccgca cccgggggtc gtcgcgggcc ggccgctggt
     2161 cggggaggat caccttgtcg atccagatct cccgggccac gtcgagggcg tcgcgggcga
     2221 tgcccagcgg cactccgggg gcgttggcga tgaacatccc cggccaggcg tagagcgggc
     2281 cgtcccgctt ggcgccgtcg gcgaaggcga acgtccgctc ggccgggatg aacaggttct
     2341 cggcggcgta gtcgcagctg ccgctcccgg ccaagccggt ggtgtgccag gtgtcgatga
     2401 cgtcgacgtc gcccctgggc atgagggcga cgcgccacac cggccctccg cccgggccgg
     2461 tgaccatggc gccgtcgtcg acggccacgg cgccggccgc caccacctcg gcgtggtgga
     2521 tgccgctggc gaaggtgaac cggcccgtga gccggtagcc gccggcggcc cggtcgacgt
     2581 cgagccggcc ggcgggtacg acgccgccgg cggtcacgat gtcgaggtcc ggatagagct
     2641 cccggccgac ggcgtcgtcg aggaaggcgg agtagaaccc gctgtcggag ccgatcatgg
     2701 cgcaccagcc ggccgacccg tccgccgccg agagcgtctc gatgatctcc gtctgggtga
     2761 cgatgtccac ctcgggcccg ccccaggcgg cgggcatcgg gaggcggaag gcccccgccg
     2821 agcgcagccc ctccaccgtg tcggggccga ggcgccgcag ccgctcgttc tccgccgcct
     2881 gctcccgcag ccgggggcgg agggcgacgg cgttggccag gatctcctgc gtcttcaccg
     2941 ccggccgggt ggctacagcc gggcccaggt ctcggccacg gccaggaagg cgctggagcc
     3001 gatcggcgga ccctccttga tgcggggcgt gcccgggacg acggcgtggc cggcctcgat
     3061 ccgggccgac cggcaggggg cgtagacgtt gcatagcgac cacggcacgt tgccgagccg
     3121 caggccctgg tcgaggatgc gccgccggtc gaggacgccg gtgatgtgca cggtcacgtc
     3181 ccgggccgag gcgtggagcc cggcggtgag gtcgacgtcg atcttgaccg acgcctgctc
     3241 cacggccgga cgggccgggc ggtcgaagtg ggccagctca ccgaagtggg tgacgaaggt
     3301 gtcgaagagc caccgcccga gcagcggcgg gtcgcacagg acgcgcagct cgcccggccg
     3361 gcacaggacg atggcgccgc cgggcccctc ctgcgaccag tcgacctgcc acaccgacac
     3421 gaaggcggtg gcctggtcgc cgtcccagag cagggcggcc ggattggcgc cgacaaaggc
     3481 gagctcgtgc cccataggac ggcgaaccta caccgcctgc ggcccggtag cgcggggttg
     3541 gggcgtgggg tcgggacgta gggttgtggc ggggggttgt ggcg
//
LOCUS       DATGJT010000388         3129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_777538, whole genome shotgun sequence.
ACCESSION   DATGJT010000388 DATGJT010000000
VERSION     DATGJT010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_777538"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1411
                     /locus_tag="VKX24_06670"
     CDS             <1..1411
                     /locus_tag="VKX24_06670"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011606254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HLJ08203.1"
                     /translation="GRTLTPAAAEVDGALGGALAAHLEASGFKGDIGETSLLPTLGRL
                     PAAELLVVGLGPQPATADALRRAAGAAARKTGRFGTVAIALPDPAPNHPGTGLAGGQA
                     VVEGYLLGSYRFDRYKSGADGRKDSRVLLAGGATDADLARGQAIAEAVAWARDIVNEP
                     AGGRSPQTFAELAYQRAVAAGISAEILNETELARRGMNGILGVGQGSRVPPRLLILRY
                     EPEGATGFVGAVGKGITFDSGGLSLKPAEAMETMKTDCSGAAAVVAAMCALPALAPKI
                     KVVAATPLAENMPGGGAIKPGDVIRHYGGRTSEVLNTDAEGRLVLADALAWMAEQRPD
                     AMIDFATLTGAITIALGKKVAGFFATSPLLAAEITGAAEATGERVWQMPFIEDLRRQG
                     DSEVADIKNIGTRWGGAIFAALFLREFTGSTPWIHVDIAGPARSDEAEHHIPKGPTGM
                     GTRLLIEWIEQRASRQGGV"
     gene            1458..1664
                     /locus_tag="VKX24_06675"
     CDS             1458..1664
                     /locus_tag="VKX24_06675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08204.1"
                     /translation="MELDGHPTHDLVDELQTRGASLYEGTGAGPDPRSLGLQPPLDPT
                     ERGLWLYLPPEVYNTGFDEPPPLT"
     gene            1712..1870
                     /locus_tag="VKX24_06680"
     CDS             1712..1870
                     /locus_tag="VKX24_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004601161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08205.1"
                     /translation="MTKWEYATVPIPPHIAAEILNNWGDQGWELVAVFSPPDVGGVVA
                     YFKRPKQG"
     gene            complement(1885..2130)
                     /locus_tag="VKX24_06685"
     CDS             complement(1885..2130)
                     /locus_tag="VKX24_06685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08206.1"
                     /translation="MSRPTSPPADGTELAGSPLTVQEQETDATVELRMARAAGSHDSG
                     FVVEWQLLPLADHREPPKRSRVEKPAIKRLVELGWQG"
     gene            complement(2266..2784)
                     /gene="moaC"
                     /locus_tag="VKX24_06690"
     CDS             complement(2266..2784)
                     /gene="moaC"
                     /locus_tag="VKX24_06690"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019433495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HLJ08207.1"
                     /translation="MTSPLGADPAAPGVPVPPALSHVGPEGDARMVDVSGKEPTVREA
                     TAAAFVRMSPETVAVVRAGGLSKGDALGVAKIAGIMAAKRTPELIPLCHPLALSKIDV
                     TLELVDEGVAVEATVRTRDRTGVEMEALVAASVASLTVYDMCKAVDKGITIEQIGLVS
                     KIGGKSGPWSRR"
     gene            complement(2781..>3129)
                     /locus_tag="VKX24_06695"
     CDS             complement(2781..>3129)
                     /locus_tag="VKX24_06695"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLJ08208.1"
                     /translation="PVRIRTLIEKPPADEAPSDIAIVGRYVLEGAVMDALAKVKPGAI
                     GEIQLTDALDMLAQQGRLFGTRYRGRRWDVGNIPGFLRANFDLAGERQELAWTVAGTG
                     PGALPGGPSAPGS"
BASE COUNT          464 a         1158 c         1089 g          418 t
ORIGIN      
        1 cggccggaca ctgacgccgg cggcagccga ggtggacggg gcgctcggtg gcgcgttggc
       61 cgcccacctg gaggcatccg gattcaaggg cgacatcggc gagacgtcgc tgctcccgac
      121 gctcggacgg ctcccggcgg cggagctcct cgtcgtcggc ctcggcccgc agccggccac
      181 tgccgacgcc ctgcgccggg ccgccggggc ggccgcccgc aagaccggcc ggttcggcac
      241 cgtcgccatc gcgctgcccg accccgcccc gaaccaccca ggcaccggcc ttgcgggcgg
      301 ccaggcggtc gtcgagggct acctgctcgg ctcctaccgc ttcgaccgct acaagtccgg
      361 cgccgacggc cgcaaggaca gccgggtcct gctcgccgga ggagccaccg acgccgacct
      421 ggcccgcggc caggcgatcg ccgaggctgt cgcctgggcc cgggacatcg tcaacgagcc
      481 cgccggcggc cgcagcccgc agaccttcgc cgagctcgcc taccagcggg cggtcgcggc
      541 ggggatcagc gccgagatcc tcaacgagac cgagctcgcc cgccggggca tgaatggcat
      601 cctcggcgtc ggccagggca gccgggtccc gccccgcctc ctgatcctgc gctacgagcc
      661 ggagggggcg accggcttcg tcggggcggt cggcaagggg atcaccttcg attccggcgg
      721 cctgtcactg aagccggccg aggcgatgga gacgatgaag accgactgct ccggggcggc
      781 ggcggtggtc gccgccatgt gcgccctccc ggccctcgcc ccgaagatta aggtggtcgc
      841 ggcgacgccg ctggccgaga acatgccggg cggcggcgcg atcaagccgg gcgacgtcat
      901 ccgccactac ggcggccgca cctcggaggt gctgaacacc gacgccgagg gccgcctggt
      961 cctcgccgac gccctggcct ggatggccga gcagcggccc gacgccatga tcgacttcgc
     1021 caccctcacc ggagcgatca cgatcgccct cggcaagaag gtcgccggct tcttcgccac
     1081 gtcgcccctg ttggccgccg agatcaccgg cgccgccgag gcgaccggcg agcgggtctg
     1141 gcagatgccc ttcatcgagg acctgcgccg gcagggcgac agcgaggtcg ccgacatcaa
     1201 gaacatcggc acccgctggg gcggggcgat cttcgccgcc ctgttcctcc gggagttcac
     1261 cggctcgacc ccgtggatcc acgtcgacat cgccggcccg gcccgctcgg acgaagccga
     1321 gcaccacatc ccgaaggggc cgaccggcat gggcacccgg ctgctgatcg aatggatcga
     1381 gcagcgggcg agccggcagg gcggggtgta gggcaaggcg caggcaacca gggcgacagc
     1441 acaaggaggc gggcggcatg gaactggatg ggcacccgac ccacgacctc gtcgacgaac
     1501 tgcagacccg gggagcgtcg ctgtacgaag gcaccggcgc cgggcccgac ccccggtcgc
     1561 tcggcctgca gccgccgctc gacccgaccg agcgcgggct gtggctctac ctcccgcccg
     1621 aggtgtacaa caccggcttt gacgaaccgc cgccgctcac ctgagcccca gcccagttga
     1681 cctcgtccga ccccgcgaga ggagagaaga gatgacgaaa tgggagtacg ccacggtgcc
     1741 gattcccccg catattgcgg cggagatcct caacaactgg ggcgaccagg gctgggagct
     1801 cgtggccgtg ttcagtcccc cggatgtggg tggcgtcgtt gcctacttca agcggcccaa
     1861 gcagggatga gccgaccggc cggcctaccc ctgccagccc agctcgacca gccgcttgat
     1921 ggccggcttc tcgacgcggc tgcgtttcgg cggctcgcga tgatcggcga gcggcagcag
     1981 ctgccattcg acgacgaacc cggaatcgtg ggacccggcg gcgcgggcca tccggagttc
     2041 gaccgttgcg tcagtttcct gttcctgtac ggtcagcggg ctacccgcga gttcggtgcc
     2101 gtccgcgggt ggactggtgg gtcgggacat ggcgctccct tctccccccc gagttggcaa
     2161 agcgaccgac gaagcgggca gattttacta cgtatgggcg gcctagaaaa gagccgcgga
     2221 agagttagtt taccgtctag tcaagaatcc tcgggcgtta gccggctatc tgcggctcca
     2281 gggcccactt ttgccgccga tcttcgagac taggccgatc tgctcgatcg tgatcccctt
     2341 gtcgaccgcc ttgcacatgt cgtagaccgt cagcgacgcc accgaggcag caaccagggc
     2401 ctccatctcg acgccggtgc ggtcgcgggt gcgcacggtc gcctcgacgg cgactccctc
     2461 gtcgaccagc tccagggtca cgtcgatctt cgacagcgcc agggggtggc acagcgggat
     2521 cagctccggc gtcctcttcg ccgccatgat gccggcgatc ttggccacgc ccagcgcgtc
     2581 gcccttggac agcccgccgg cgcgcaccac cgccacggtc tcgggcgaca tgcgcacgaa
     2641 ggcggccgca gtggcctcgc gcaccgtcgg ctccttgccc gacacgtcga ccatccgggc
     2701 gtcgccctcg gggccgacat gcgacagcgc agggggcacc gggacgcccg gtgcggccgg
     2761 gtcagcgccc agtgggctcg tcaactcccc ggcgccgagg ggccacccgg aagggcaccc
     2821 ggcccggtgc cggcgaccgt ccaggcgagc tcctgccgct cgcccgccag gtcgaagttg
     2881 gcccgcagga acccgggaat gttgccgacg tcccagcggc gtccccggta gcgggtgccg
     2941 aacagccggc cctgctgggc cagcatgtcg agggcgtcgg tcagctggat ctcgccgatc
     3001 gcccccggct tgaccttcgc cagcgcgtcc atcaccgcac cctcgagcac gtagcgcccg
     3061 acgatggcga tgtccgacgg ggcctcgtcg gccggcggct tctcgatcag ggtccggatg
     3121 cgcaccgga
//
LOCUS       DATGJT010000389         2406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_673845, whole genome shotgun sequence.
ACCESSION   DATGJT010000389 DATGJT010000000
VERSION     DATGJT010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673845"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            410..697
                     /locus_tag="VKX24_06700"
     CDS             410..697
                     /locus_tag="VKX24_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018585424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HLJ08209.1"
                     /translation="MAQDVARATRWSPAQWRDAGSCRDSDPNLFYPLGRGRAAREQAE
                     VAKVLCRTCPSREPCLAFALATGQALGVWGGTSPEDRRIILGGGRRTQVAS"
     gene            complement(703..831)
                     /locus_tag="VKX24_06705"
     CDS             complement(703..831)
                     /locus_tag="VKX24_06705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08210.1"
                     /translation="MATNVVILWYTAAGTFTWSKDRGCAIAPRERRLAAPFGPKLS"
     gene            complement(940..1212)
                     /locus_tag="VKX24_06710"
     CDS             complement(940..1212)
                     /locus_tag="VKX24_06710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08211.1"
                     /translation="MSHAVVMQVKLPRGDDQAEERMLKEQVIPHARTQAGFQKGMWMR
                     SDDETGMGVVVFDNEDNAQAAMAALKPPAGGPVLISSKVFQIGAEA"
     gene            1652..>2406
                     /locus_tag="VKX24_06715"
     CDS             1652..>2406
                     /locus_tag="VKX24_06715"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLJ08212.1"
                     /translation="MVQVADPNGDSPSAERYRHVFEDGPIGIWLVDRDLRTLELNAAM
                     SRMLGYSAEELGQRTFADLTHPDDLDSDLALTAQLLAGELSTFTVEKRYVTKAGDPIW
                     VDLTVTAVRDDADEFSYAIALVRDITERRKTETALADRGRHLADAEALAHAGSFTSDP
                     RGDDIEWSDELYRVFGSEPRAIEPTLQLVFDMVHPDDLAMVQARITTLMRTGEPFDME
                     YRINRLDGGAAWVRARTSVDMGPAGPERLFGSV"
BASE COUNT          361 a          866 c          799 g          380 t
ORIGIN      
        1 ttgccggcgc cgttcgggcc gagcacggcg atcacctggc cggcgtcggc gaccaggtca
       61 aggccgtcga gcgcgatcgt cttgccgtag cgcttcgtga ggccgcgggc ctcgatcatg
      121 agtggtgcac cggcatcgtc gtgctcgacc ttcctgggca tccgtctctc ggatgcgcga
      181 ccggggtctc gagcggcgcc gtgctgcgca ggcagtcatc ctgcgagcag ccccgacgtt
      241 aacacgacgg ggcgtccggg gccccgtcgc ccgatcgctc gccggccctc gaccgcctac
      301 actgcggacg ttcccgatcg ggccggcccc cctgcctgat tgtctcgatt ggcgcatccc
      361 agaccccggt ggcgcgatcg accccctgca ccagcggagg tcggcccaga tggcccagga
      421 tgtggcccga gcgacacggt ggtccccggc gcagtggcgc gacgccggca gctgccgcga
      481 cagcgatccg aacctcttct acccgttggg gaggggacgc gccgcccgcg aacaggccga
      541 ggtggccaag gttctctgcc gcacctgccc gtcccgcgag ccgtgcctcg ccttcgccct
      601 ggccacgggc caggcactgg gcgtctgggg aggcacgtcc ccggaggacc gccggatcat
      661 cctcggtggt gggcggcgaa cgcaggtggc gtcctagacg gctcaggaga gcttcgggcc
      721 gaaaggcgca gccagccgcc gctcccgagg tgcgatcgcg cagccgcggt ccttcgacca
      781 cgtgaacgtg ccggcggcgg tgtaccacag gatcacaacg ttcgtcgcca ccgtccccgt
      841 ccttcccggc ccgatgagca ccgctccgac gtgaccgaac cgcgcagggg cccctgccga
      901 agcaggggcc gtcttctctg cgccactccg cttgcgccgt taggcttcgg cgccgatctg
      961 gaagaccttg ctggagatca gaaccgggcc gccggccggg ggcttgaggg ccgccatggc
     1021 cgcctgcgcg ttgtcctcgt tgtcgaagac gaccacgccc atcccggtct cgtcgtcgga
     1081 gcgcatccac atacccttct ggaaaccggc ctgggtcctg gcgtggggga tgacctgctc
     1141 cttgagcatc cgctcttccg cttggtcgtc tcctcgggga agcttcacct gcatgactac
     1201 ggcgtgcgac atatcgatcc tctctgttgg acgaacggct tcgacctggg caccccgact
     1261 cgtttcgcgg tgctccgtcc ctgacccgcc gagccgcccc ggggcgtcag caacagtcgg
     1321 gaacacgcgg aaccgtgccc tgcggatcag gcagtcagcc acgactgccg aggggctggg
     1381 gcaggcatcc gcaatggatt cacgccacca gggtccggag gagcgcaaca ccgacggtaa
     1441 cacggttctg ctccggccgc ttccgcattg tggtagtttg attctagaat tttattgcga
     1501 gtaagcaagg ctgaccgcca ggcccccggc caacggctcc gatccgctga cggagacgcc
     1561 gattcgagcg cctcgtcctg ttacgctcga tttggcgctg ctccggacct cggtgcgtca
     1621 tcacatccgt cgatgacgcc agggagcggg catggtccag gtggcagatc ccaacggtga
     1681 ctcgccgtcg gcggaacgct accgccacgt cttcgaggac gggccgatcg gcatctggct
     1741 ggtggaccgg gacctgcgga cgctggagct gaacgccgcg atgagccgga tgctcggcta
     1801 cagcgccgag gagctcggcc agcggacgtt cgccgacctc acccatcccg acgatctcga
     1861 ttccgacctg gcgttgaccg cccaactcct cgccggtgag ctctcgacct tcacggtcga
     1921 gaagcggtac gtgaccaagg ccggggaccc gatctgggtc gatctcaccg tcaccgcggt
     1981 gcgggacgac gccgacgaat tcagctacgc catcgccctc gtacgcgaca tcaccgaacg
     2041 ccggaagacc gagacggcgc tggccgaccg ggggcggcac ctggccgacg ccgaggcgct
     2101 ggcccatgcc gggtcgttca cctcggaccc tcgcggcgac gacatcgagt ggtccgacga
     2161 gctctaccgg gtcttcggga gcgagccccg ggcgatcgag cccaccctcc aactcgtctt
     2221 cgacatggtc catcccgacg atctcgccat ggtccaggcc cgcatcacca ccctgatgcg
     2281 gacgggcgaa cccttcgaca tggagtaccg catcaaccgg ctggacggag gagcggcctg
     2341 ggtgcgggcg cggacctccg tcgacatggg cccggccggg cccgagcggc tcttcgggag
     2401 cgtcca
//
LOCUS       DATGJT010000390         3647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_155657, whole genome shotgun sequence.
ACCESSION   DATGJT010000390 DATGJT010000000
VERSION     DATGJT010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155657"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VKX24_06720"
     CDS             <1..592
                     /locus_tag="VKX24_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ08213.1"
                     /translation="YLGQAAPERLTGLAALSIPFWPRPPRPPTTMWKELFGDRFFYML
                     HFQTPGVADAQLGADPGASLRLVMRRVSEDVFDGTAEVPPVFKWMTDEEFAVYEAEFR
                     RTGFTGGINWYRNVDRNWRLTAGIADRPIDVPTMFLAGERDPVLSFIPTEPMRERVSD
                     LREYVLVAGAGHWVQQERPAETNEVLLRFLAGLGLG"
     gene            complement(589..903)
                     /locus_tag="VKX24_06725"
     CDS             complement(589..903)
                     /locus_tag="VKX24_06725"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007029509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HLJ08214.1"
                     /translation="MILIVLKIQIRPDRRDVWLERIAKYTAAVRDEPGNLTFDVYESI
                     DAPNEFSIVEGFASKEAGDAHVQTEHFKDFLVWFPTVIGTAPQIINTQVDGWNRMSEF
                     DN"
     gene            complement(900..1322)
                     /locus_tag="VKX24_06730"
     CDS             complement(900..1322)
                     /locus_tag="VKX24_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08215.1"
                     /translation="MNPRQRQESVYAAEDAALADAGRVFRHLGEVRAYVDELLAGEWW
                     ADRWPHIDAIPVGRSRSRRFSGYAVDGAAEIRLAGGPVREPVLLHEIAHVVAPGAGHG
                     PAFVAALGALVRERLGFHSYGALLAELRRRNLLEGDRA"
     gene            complement(1342..2112)
                     /locus_tag="VKX24_06735"
     CDS             complement(1342..2112)
                     /locus_tag="VKX24_06735"
                     /inference="COORDINATES: protein motif:HMM:NF022432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HLJ08216.1"
                     /translation="MGIQADYVRKIQGLLATAESLAEQGNDEAAGAYVAKAHALQQKY
                     SIDQAMLADADGGAGGAGPAGTIVDRTWTMPGAYGRRKVDLAHVVAVHTGCAGYFSRA
                     ESGGYRFTVFGFIADVEWAETLFFSLCHQAESALRHAEKAHHDHGRSFTTAFLAGFTH
                     EVARRLREAAKEAERAAAREQATAAGGNPPRSVALVLAGKAKRVEEELKAKVGRLSTS
                     RLSGSQSWSGFEQGRAAGRHAALARGSVDHGAAPVLPR"
     gene            complement(2147..2710)
                     /locus_tag="VKX24_06740"
     CDS             complement(2147..2710)
                     /locus_tag="VKX24_06740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017537639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03086 family metal-binding protein"
                     /protein_id="HLJ08217.1"
                     /translation="MGEVIDMYRRAVETFGQRVMAVGPQDWSRPTPCSDWSVRDLVRH
                     LVYEELWAPDLFEGQTVADVGDRYEGDILGADPQAAWKESAAGAVAAVDPGVLDRTVH
                     LSFGDVPGREYLGQLTADHVIHAWDLARGTGGDDRLDPELARFVHDFLAPQAEMWRGA
                     GVFGPAVAVGDDADVQSKLLALTGRTP"
     gene            complement(2731..3099)
                     /locus_tag="VKX24_06745"
     CDS             complement(2731..3099)
                     /locus_tag="VKX24_06745"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HLJ08218.1"
                     /translation="MSIPVELDKVREQVAACGSYAFLLTVTEDGRPHAVSLVVDWDGD
                     ELVCAPGPRTMANAERSAEVSLLWPVSGRAGFTLFVNGRAEVRGDGEARKLAVKPASA
                     VLHKTPEGEAQAPGCVRVLQ"
     gene            complement(3096..>3647)
                     /locus_tag="VKX24_06750"
     CDS             complement(3096..>3647)
                     /locus_tag="VKX24_06750"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007319965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ08219.1"
                     /translation="VDVLVNNAGVASRGRAVVDTDTEEVERLLRIHAVGAHTLCRAVL
                     PSMRTRPRGDIVMISSVITRDVPPNAAPYAMAKGALEMLAATLAREERRHGVHVNVVA
                     PGLVETEMGRRLAKATFGTDDMRALDAAFPFGRVCSPEDVAGVVRFLLSPAAGYMTGE
                     VLRVDGGGGRSVVAEEPSGRTER"
BASE COUNT          476 a         1323 c         1332 g          516 t
ORIGIN      
        1 gtacctcggg caggcggcgc cggagcggct caccggcctg gccgccctga gcatcccgtt
       61 ctggccccgg ccgccccgtc cgccgacgac gatgtggaag gagctgttcg gcgaccgctt
      121 cttctacatg ctccacttcc agacgcccgg cgtggccgac gcccagctcg gcgccgaccc
      181 cggcgccagc ctccggctcg tgatgcggcg ggtctcggag gacgtcttcg acgggaccgc
      241 cgaggtgccg cccgtcttca agtggatgac cgacgaggag ttcgccgtct acgaggcgga
      301 gttccgccgc accggcttca ccggcgggat caactggtac cgcaacgtcg accgcaactg
      361 gcggctgacc gccggcatcg ccgaccgccc gatcgacgtg ccgaccatgt tcctggccgg
      421 cgagcgcgac ccggtgctgt cgttcatccc cacggaaccg atgcgggagc gggtgtcgga
      481 cctgcgggag tacgtgctcg tggccggcgc cggccactgg gtccagcagg agcgcccggc
      541 cgagacgaac gaggtcctgc tgcggttcct ggccggcctg ggcctgggct agttgtcgaa
      601 ctccgacatg cggttccacc cgtcgacctg cgtgttgatg atctgcgggg cggtcccgat
      661 gacggtgggg aaccagacga ggaagtcctt gaagtgctcg gtctgcacgt gggcgtcgcc
      721 cgcctccttg gaggcgaacc cctccacgat cgagaactcg ttcggcgcgt cgatgctctc
      781 gtagacgtcg aatgtcaggt tgccgggctc gtcccggacg gcagccgtgt acttggcgat
      841 gcgctcgagc cacacgtcac gccggtcggg acggatctgg atcttcagga cgatgaggat
      901 cacgctcggt ctccctccag aaggttgcgg cgccgcagtt cggcgagcag cgcgccgtag
      961 ctgtggaagc ctaagcgctc ccgcacgagc gcgccgaggg cggccacgaa ggccgggccg
     1021 tgcccggcgc cgggcgccac gacgtgggcg atctcgtgga gcaggacggg ctcgcggacc
     1081 gggccgccgg ccagccggat ctccgccgcg ccgtcaacgg cgtagccgct gaaccggcgg
     1141 ctgcggctgc ggccgacggg gatggcgtcg atgtgcggcc accggtcggc ccaccattcg
     1201 ccggccagga gctcgtcgac gtaggcccgc acctcgccca ggtggcggaa gacccgtccg
     1261 gcgtcggcca gggcggcgtc ctcggcggcg tagacggatt cctggcgctg gcgggggttc
     1321 acggctgccg tcctgccgcc ctcagcgcgg caggacgggc gccgcgccgt ggtccacgga
     1381 tccccgggcc agcgccgcat ggcggccggc ggcccggccc tgctcgaagc ccgaccacga
     1441 ctgcgagccg ctgaggcgcg acgtactcag ccgcccgacc ttggccttca gttcctcttc
     1501 gacccgcttg gcctttccgg ccaggacgag ggcgacgctg cgcggcgggt tcccgcccgc
     1561 cgcggtcgcc tgttcccggg ccgcggcccg ctccgcctcc ttcgccgcct cccgcaggcg
     1621 gcgggccacc tcgtgggtga agccggccag gaaggcggtg gtgaacgacc ggccgtggtc
     1681 gtggtgggcc ttctcggcgt ggcgcagcgc cgactcggcc tggtggcaga ggctgaagaa
     1741 cagcgtctcg gcccattcga cgtcggctat gaacccgaag acggtgaacc ggtagccgcc
     1801 gctctcggcc cgggagaagt agccggcgca gccggtgtgg acggcgacca cgtgggccag
     1861 atcgaccttg cggcgcccgt aggcgccggg catggtccac gtacggtcga cgatggtgcc
     1921 cgccgggccg gcaccgcccg caccgccgtc ggcgtcggcc agcatggcct ggtcgatgct
     1981 gtacttctgc tgcagggcgt gggccttggc gacgtaggcg ccggccgcct cgtcgttgcc
     2041 ctgctcggcc agcgactccg ccgtggccag cagcccctgg atcttgcgga cgtagtcggc
     2101 ctggatcccc atatgggccg gggaccgtag cgcaacgaac cgggcgtcag ggggtgcggc
     2161 cggtgagcgc caggagcttc gactggacgt cggcgtcgtc gccgacggcg acggcgggac
     2221 cgaagacgcc ggcgccgcgc cacatctcgg cctggggggc caggaagtcg tggacgaacc
     2281 gggccagctc cgggtcgagg cggtcgtcgc cgccggtgcc ccgggccagg tcccaggcgt
     2341 ggatgacgtg gtcggcggtg agctggccga ggtactcccg gccggggacg tcgccgaagg
     2401 agaggtgcac cgtccggtcg aggacgccgg gatcgacggc ggccacggcg ccggcggccg
     2461 actccttcca ggccgcctgg gggtcggcgc cgaggatgtc gccctcgtag cggtcgccga
     2521 cgtcggcgac cgtctggccc tcgaacaggt ccggcgccca cagctcctcg tagacgaggt
     2581 ggcggacgag atcgcgcaca ctccaatcgc tgcacggcgt cggccggctc cagtcctgcg
     2641 ggccgacggc catcacccgc tgcccgaagg tctccaccgc tcgccggtac atgtcgatga
     2701 cctcgcccat gacgacctct ctcttttcgg ttactggagc acccgcacgc agcccggcgc
     2761 ctgcgcctcg ccttcgggcg tcttgtgcag caccgcgctg gccggcttca cggccagctt
     2821 tctcgcctcg ccgtcgcccc ggacctcggc ccgtccgttg acgaagagcg tgaagccggc
     2881 ccgccccgag accggccaga gcagcgacac ctcggccgag cgctcggcat tggccatcgt
     2941 ccgggggccg ggggcgcaga cgagctcgtc gccgtcccag tccacgacca gtgacacggc
     3001 gtggggccgc ccgtcctcgg tgaccgtgag gaggaaggcg tacgacccgc aggccgccac
     3061 ctgctcccgc accttgtcga gctccaccgg aatgctcaac gctcagtcct ccctgatggt
     3121 tcttcggcga caaccgatcg cccgccgcca ccgtcgaccc gcagcacctc tccggtcatg
     3181 tagccggcgg cgggagacag gaggaagcgt acgaccccgg cgacgtcctc gggggagcag
     3241 acccggccga aggggaaggc ggcgtcgagg gcccgcatgt cgtcggtgcc gaaggtggcc
     3301 ttggccaggc gccggcccat ctccgtctcg accagcccgg gggcgacgac gttgacgtgg
     3361 acgccgtggc ggcgctcctc ccgggccagc gtggcggcca gcatctccag cgcccccttg
     3421 gccatggcgt agggggcggc gttgggcggg acgtcgcggg tgatgaccga cgagatcatc
     3481 acgatgtcgc cccggggccg ggtgcgcatc gacggcagca cggcccggca cagcgtgtgg
     3541 gcgccgacgg cgtggatccg cagcagccgt tcgacctcct cggtgtcggt gtcgacgacc
     3601 gcccggcccc ggctggccac gccggcgttg ttgacgagga cgtccac
//
LOCUS       DATGJT010000391         4588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_52030, whole genome shotgun sequence.
ACCESSION   DATGJT010000391 DATGJT010000000
VERSION     DATGJT010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4588
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52030"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VKX24_06755"
     CDS             <1..585
                     /locus_tag="VKX24_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HLJ08220.1"
                     /translation="FAKYLDTKLSGHYPINAHLRMLLDDIIADSRWDMTYLGMQIMVE
                     GLALAAFGFISQMTTEPLLKALLKNVMADEARHVAFGVLSLQEFYAQLTAAEIRERQE
                     FAFEAAVRMRDRFLQQEVWERMGVDVKRAVEVLLKTPERDIFQSMLFSKIVPNCRKLG
                     LLDAADGWLRQRFTELGVIQFEHWEDTAAELAVA"
     gene            719..3877
                     /locus_tag="VKX24_06760"
     CDS             719..3877
                     /locus_tag="VKX24_06760"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ08221.1"
                     /translation="MALLLAAAGVLLLWHRDAVAAATAVLILAAVAGLVVRRGRGAIR
                     RTVALVAVGATVLAVVSGTVIARRPAPARPQGPLLVVPPGTPAPAAAAAPAATVLGFV
                     APDYGDAGAVIDRDGPRVSSVAATGITLGRAAGTIDVRAATDALAAAHLQGAAAFAVV
                     SNYDGSQFNGGRAASVLASPKDRKRLVSALAAELGRRGWDGVVLDLERLPAPARAGYP
                     ALVADLKRAAGDRPVLVAVPAPDPGNPAAGEGYDLAALGAAADQVVLMAYDQHPAAGT
                     PGPIAGLPWVERALDAATAAVPPEKLLLGVAGYGYAWPATGPGPARDLTVADGQALAA
                     QPGSTAEFDAGEGEWRVRAADGTEAWYSDARSTALRAGLAAGRHLAGVALWRLGTEDP
                     AALSSLPFPPLRATGTLPGGGTEVVRATGVVALTFDDGPDPRFTSPILDILRTKHVPA
                     TFFVIADEAQDHPELVRREVADGHVVANHTYSHLDLTTMPKAPAEAEILGGAAVIEGI
                     TGLKPALFRAPYGDGDAARPDTEGADQLALDLGMHPVRWTDDPSDWRRPGAGAIVDRV
                     LAGATTHTVVLLHDGGGDRSETVAALPGIIDGLRARGYAFTTVDRLQAGVTGPYLTRT
                     GAASRARGVGIIAAFRLQLAGRQVLLVLLGIIVVLSLWRILAGGALAIGHRRRAKRRR
                     APAFVPPGGLSFTVVIPAHNEERVIAKALAALDLARGPGVEVIVVDDGSTDATAEIAA
                     AFTVKVIRQARRGKAAALNAGIAVAAGEVVVVLDADTVLDGGFLAAVAPHFADPAVGA
                     VAGNVKVGNRRSRLARLQALEYLVSLDIDRRAQDVLGVVAVVPGAAGAFRRAALVDAG
                     GYPDDTLVEDADLTVALLRGGWRIHYEPAAVAWTEAPETVRDALRQRRRWSYGTIEVL
                     AKHAGSMLRPDDGRIGLLGLPWMLVSQVLLPLGGPLADAFLLYLLALRRFSLAAVMLG
                     LTFLLDLVVTVAVVAGEREDPRLIAAVPFLRLVWRPLQLVAAAGSTVGWLRREPERWR
                     RIRRRNTVVVPAPAPVTARSGR"
     gene            3912..>4588
                     /locus_tag="VKX24_06765"
     CDS             3912..>4588
                     /locus_tag="VKX24_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HLJ08222.1"
                     /translation="MTNPVRVVFLGGLGEIGRNCACIEVEDRILLIDCGIMFPEPDMP
                     GVDLVLPDFTYLRENAERIEGVVLTHGHEDHGGGLAFLLAEVAPVPIYGSALSLGLAR
                     NRIEEAGMLSRTELIPVTDGERRRIGPFECQFIPVTHSVPHGFATAIFTPAGTILHSG
                     DFKLDQNPVDGRMTDLALIGEIGRQGVRLLLSDSTNAEEAGHTPSESTVGVVLRELFW
                     EHSGKRIV"
BASE COUNT          554 a         1781 c         1620 g          633 t
ORIGIN      
        1 ttcgccaagt acctcgacac caagctctcg ggccactacc cgatcaacgc ccacctccgg
       61 atgctgctcg acgacatcat cgccgactcc cgctgggaca tgacctacct cggcatgcag
      121 atcatggtcg aggggctggc cctggccgct ttcggcttca tctcccagat gacgacggag
      181 ccgctgctca aggcgctgct caagaacgtc atggccgacg aggcccgtca cgtcgccttc
      241 ggcgtgctgt cgctgcagga gttctacgcc cagctcaccg cggccgagat ccgggagcgc
      301 caggagttcg ccttcgaggc cgccgtccgc atgcgggacc gcttcctgca gcaggaggtg
      361 tgggagcgga tgggcgtcga cgtcaagcgg gccgtcgagg tcctgctgaa gacccccgag
      421 cgcgacatct tccagtcgat gctgttctcc aagatcgtcc ccaactgccg caagctgggc
      481 ctgctcgacg ccgccgacgg ctggctccgg cagcgcttca ccgaactcgg cgtgatccag
      541 ttcgagcact gggaggacac cgccgccgag cttgccgtcg cctgacgtga aacggcgtga
      601 aatcgggttc cagaccggcg tgaaatgacc gttcgggcag gacttcgtcc cgtccgggcg
      661 aagtcgaacc tgcttggacg agcgccgaac ttccctgcag ggccgggcgc ccaggctcgt
      721 ggcgctcttg ctcgccgcgg ccggggtgct cctgctctgg caccgcgacg ccgtggcggc
      781 ggcgacggcg gtcctgattc tggccgcggt ggccggcctc gtcgtccgtc gcggccgcgg
      841 tgccatccgc cgcacggtgg cgctggtggc ggtcggggcc accgtcctgg cagtggtgag
      901 cggcaccgtc atcgcccgcc ggccggcgcc ggcccggccg cagggtccgc tgctcgtcgt
      961 cccgcccgga acgccggccc cggcggcggc ggccgcaccg gcggcgaccg tgctcggctt
     1021 cgtcgccccg gactacggcg acgccggcgc cgtcatcgac cgcgacggtc cccgggtctc
     1081 gtcggtggca gccaccggga tcaccctcgg ccgcgccgcc ggaaccattg acgtccgagc
     1141 ggccaccgac gccctggcgg ccgcccatct ccagggcgcc gccgccttcg ccgtcgtgtc
     1201 gaactacgac ggcagccagt tcaacggcgg acgggcggcg tcggtgctgg cctcgccgaa
     1261 ggaccggaaa cggctggtga gcgccctcgc cgccgagctc ggccgacggg gatgggacgg
     1321 cgtcgtcctc gacctcgagc ggctccccgc cccggcccgg gcggggtacc cggcgctggt
     1381 ggccgacctc aagcgggcgg cgggagaccg gccggtgctc gtcgccgtcc ccgccccgga
     1441 ccccggcaat ccggcggcgg gggagggcta cgacctcgcc gcgctcgggg cggcggccga
     1501 ccaggtcgtc ctcatggcct acgaccagca cccggccgcc ggcactcccg gcccgatcgc
     1561 cggcctgccg tgggtggagc gggcgctcga cgccgccacc gccgccgtcc cgccggagaa
     1621 gctcctcctc ggcgtggccg gctacggcta cgcctggccg gccaccggcc cgggaccggc
     1681 ccgggacctc accgtggccg acgggcaggc cctggccgcc cagcccggct cgacggcgga
     1741 gttcgacgcc ggggaaggag agtggcgggt ccgcgccgcc gacggcaccg aggcctggta
     1801 ctccgacgcc cgcagcacgg cgctgcgggc cggcctggcc gccggccggc acctggccgg
     1861 cgtggcgctg tggcggctcg gtaccgagga tccggccgcc ctctcctcgc tgccgttccc
     1921 gccgctccgg gcgaccggaa ccctgcccgg cggcgggacc gaggtcgtgc gggccaccgg
     1981 ggtggtggcg ttgaccttcg acgacgggcc cgatccccgc ttcacctcgc cgatcctcga
     2041 catcttgcgc acgaagcacg tcccggcgac gttcttcgtc atcgccgacg aggcccagga
     2101 ccacccggag ctcgtccgcc gggaggtcgc cgacggccat gtcgtggcca accacaccta
     2161 ctcccacctc gacctcacga cgatgccgaa ggccccggcg gaggcggaga tcctcggcgg
     2221 cgcggccgtg atcgagggga tcaccggcct gaagccggcg ttgttccggg cgccgtacgg
     2281 cgacggcgac gccgcccggc ccgacaccga gggcgccgac cagctggccc tcgacctggg
     2341 catgcacccc gttcggtgga ccgacgaccc gagcgactgg cgccgccccg gcgccggcgc
     2401 catcgtcgac cgggtgctgg ccggggcgac gacccacacc gtcgtcctcc tccacgacgg
     2461 cggcggcgac cgttccgaga ccgtggccgc cctgcccggc atcatcgacg gcctgcgggc
     2521 caggggctac gccttcacca ccgtcgaccg cctccaggcc ggcgtgaccg ggccctacct
     2581 gacccggacg ggtgccgcgt cccgggcccg gggcgtgggg atcatcgccg ccttccgcct
     2641 gcagctggcg ggccggcagg tactgctcgt cctgctcggc atcatcgtgg tgctgtcgct
     2701 gtggcggatc ctggccggag gggcactggc gatcgggcac cgccgccggg cgaaacggcg
     2761 ccgggcgccg gccttcgtcc cgcccggcgg cctgtcgttc accgtcgtga tccccgccca
     2821 caacgaggaa cgggtcatcg ccaaagcgct ggccgccctc gacctggccc gggggcccgg
     2881 cgtggaggtg atcgtcgtcg acgacggctc aaccgacgcc acggccgaga tcgccgcggc
     2941 gttcacggtc aaggtcatcc gccaagcgcg gagaggcaag gccgccgccc tcaacgccgg
     3001 aatcgccgtg gccgccggcg aggtggtcgt cgtcctcgac gccgacaccg tgctcgacgg
     3061 cgggttcctc gccgccgtcg ccccgcactt cgccgatccg gccgtcgggg cggtggccgg
     3121 caacgtcaag gtcggcaacc ggcggtcgcg gctggcccgg ctccaggcgc tggagtatct
     3181 cgtcagcctg gacatcgacc gccgggccca ggacgtcctc ggcgtcgtgg ccgtcgtgcc
     3241 cggcgcggcc ggcgccttcc ggcgcgccgc gctggtcgac gccggcggct accccgacga
     3301 caccctggtc gaggacgccg acctcaccgt cgccctgctc cgcggcggat ggcgcatcca
     3361 ctacgaaccg gccgccgtgg cctggaccga ggcccccgag accgtccggg acgccctccg
     3421 ccagcgccgc cggtggtcct acggcacgat cgaggtgctg gccaagcacg ccggttcgat
     3481 gctccggccc gacgacggcc gcatcggcct cctcggcctt ccgtggatgc tggtgtcgca
     3541 ggtgctcctc ccgctcgggg ggccgctggc cgacgccttc ctgctctatc tcctcgccct
     3601 ccgccggttc tcgctggccg cggtgatgct cggcctcacg ttcctcctcg acctggtggt
     3661 caccgtggcg gtggtggccg gcgagcggga ggacccccgg ctcatcgccg ccgtcccgtt
     3721 cctccgcctc gtctggcggc ccctgcagct ggtcgccgcg gccgggagca ccgtgggctg
     3781 gctccggcgg gagcccgagc ggtggcggcg gattcggcgg cgcaacaccg tcgtcgtgcc
     3841 ggcgcccgcg ccggtcacgg cccgttccgg gcggtgaggg ccggtgggac gggctgctac
     3901 cttcacccgg cgtgactaac cccgtccgcg tcgtcttcct gggtggcctc ggcgagatcg
     3961 ggcgcaactg cgcctgcatc gaggtcgagg accgaatcct gctcatcgac tgcgggatca
     4021 tgttccccga acccgacatg cccggcgtcg acctcgtgct ccccgacttc acctacctgc
     4081 gggagaacgc cgagaggatc gagggcgtcg tcctcaccca cggccacgag gaccacggcg
     4141 gcggcctggc cttcctcctg gccgaggtgg cgccggtgcc gatctacggc tcggccctgt
     4201 cgctggggct ggcccgcaac cggatcgagg aagcggggat gctctcccgc accgagctga
     4261 tcccggtgac cgacggcgag cgacgccgga tcggtccatt cgagtgccag ttcatcccgg
     4321 tcacccactc cgtgccccac ggcttcgcca ccgccatctt caccccggcc gggacgatcc
     4381 tccactccgg cgacttcaag ctcgaccaga accccgtgga cgggcgcatg accgacctgg
     4441 cgctgatcgg cgagatcggc cggcaggggg tccggcttct cctgtccgac tccaccaacg
     4501 ccgaggaggc gggccacacg ccgtcggagt cgacggtcgg ggtcgtgctc cgggagctgt
     4561 tctgggagca cagcggcaag cggatcgt
//
LOCUS       DATGJT010000392         2666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1296872, whole genome shotgun sequence.
ACCESSION   DATGJT010000392 DATGJT010000000
VERSION     DATGJT010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1296872"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1450)
                     /locus_tag="VKX24_06770"
     CDS             complement(<1..1450)
                     /locus_tag="VKX24_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HLJ08223.1"
                     /translation="MDTLAPDRVLGGRYRLRRELARGGMAAVWEAEDRVLTRRVAIKV
                     LHPHLAGDDAFRTRFRREAVSAAKLAHPNIVTTYDTGRDADVAYIVMELVEGTTLARL
                     LKSQGALPVAKAVDIAAQVADALACAHSHGVVHRDVKPANILLREDGHVKVADFGIAK
                     AGAGNDLTRTGVVMGTAKYLSPEQVSGNPADPGSDVYALGIVLYEMLCGTPPFVGETE
                     LSTAVARLTASPGRLRDRRQDVPRGLEAVVLRSLARDPAARFQSAEEMRAGLLAVDPD
                     NAEVTPPAGLALAAAPAPRRGIPRLLVAGLAALLFVSVAVIVRSGGGGGPASSRSGKA
                     GLAAPAGGALAEPRALPAHSFDPFGDDKVENESTVGNVSDGDPNTVWKTQSYNDNFPK
                     LKPGVGVYLDLGRTSKVADVKVMASNGYVAEIYVADRPGADLQSWGRPRSGPGNGTFS
                     LGGASGRYVLVWFTSLPEVDGSYKVEVSEITVD"
     gene            complement(1512..>2666)
                     /locus_tag="VKX24_06775"
     CDS             complement(1512..>2666)
                     /locus_tag="VKX24_06775"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HLJ08224.1"
                     /translation="YGITAVATALLNAHRRFAAPAVTPVFNNLLVTGIFLALPHLARS
                     RLTLEGVQHDTGTLWLLGLGTTAGIVAMALPLLPAVRRAGIRVRPVFRFGHPAVRKVV
                     RLSGWTAGYVAVNQLALWIVLVLANGTKGGVSIYQGAYVFQQLPHGLVAVSLMTTLTP
                     ELAETVARREFAAFRRSFALGLRLMTLVILPAVGGYLVLSRPVVGLLLQRGALTSAEA
                     GATATCVALFAVGLLPFSAYLYALRGFYALHDTRTPFFLNCWENLANVVLAVALYPWF
                     GVQGLAFGFSVAYGVAAVMALRALARRTGGLGVDLKTRQVLVRTAVAAGVMTVAVALA
                     VAALPGGAPELVEAIVGVIVGVAVYGAALSAMRVREMAEIIRRVRTRLTG"
BASE COUNT          402 a          967 c          981 g          316 t
ORIGIN      
        1 aatcgacggt gatctcggag acctcgacct tgtagctgcc gtcgacctcg ggcagcgagg
       61 tgaaccagac gaggacgtag cggccgctcg cccccccgag gctgaacgtg ccgttgccgg
      121 ggccggagcg cggccgcccc cagctctgga ggtcggcccc gggccggtcg gcgacgtaga
      181 tctcggccac gtacccgttg ctggccatca ccttgacgtc ggccaccttg gacgtccggc
      241 cgagatcgag gtacacgccg acgcccggct tcagcttggg gaagttgtcg ttgtagctct
      301 gcgtcttcca gaccgtgttg ggatcgccgt cggagacgtt gcccaccgtc gactcgttct
      361 cgaccttgtc gtcgccgaag gggtcgaagc tgtgggcggg cagcgctctc ggctcggcga
      421 gggcgccgcc ggccggggcg gccagcccgg ccttcccgct ccggctcgac gccggcccgc
      481 ccccgcctcc ggagcgcacg atcaccgcca ccgacacgaa cagcagcgcc gccagcccgg
      541 ccaccagcag ccgggggatc ccccgccgcg gcgccggggc ggcggccagc gccagccccg
      601 ccggcggcgt cacctcggcg ttgtcgggat cgacggccag gagccccgcc cgcatctcct
      661 cggccgactg gaagcgggcg gcggggtcgc gggccaggga gcggagcacc accgcctcga
      721 gaccccgggg cacgtcctgc cggcggtcgc gcagccggcc gggggaggcg gtcagccggg
      781 ccacggccgt cgacagctcg gtctcgccga cgaacggcgg cgtaccgcag agcatctcgt
      841 agagcacgat cccgagggcg tagacgtcgc tgccggggtc ggccggattg ccgctgacct
      901 gctccggcga gaggtacttg gccgtcccca tcaccacgcc cgtgcgggtg aggtcgttgc
      961 cggcgccggc cttggcgatg ccgaagtccg ccactttcac gtgcccgtcc tcccgcagga
     1021 ggatgttggc cggcttcacg tcgcggtgga cgacgccgtg ggaatgggcg caggccaggg
     1081 cgtcggccac ctgggcggcg atatcgacgg ccttggccac cgggagcgcc ccctgcgact
     1141 tgagcagccg ggccagggtc gtgccctcga ccagttccat gacgatgtag gcgacgtcgg
     1201 cgtcgcgccc cgtgtcgtac gtcgtgacga tattgggatg ggccagcttg gccgccgaca
     1261 ccgcttcccg gcggaaccgg gtgcggaagg cgtcgtcacc ggccaggtgg gggtggagga
     1321 ccttgatggc cacccgccgc gtgagcaccc ggtcctcggc ttcccagacc gcggccatgc
     1381 cgccgcgcgc cagctcccgg cgaaggcggt accgccctcc gaggacgcgg tcgggggcca
     1441 gcgtgtccac agcgctccaa cggtagtgcc tgcacggatc ccaacctggg acaccaggtg
     1501 accgagaagc gttacccggt gaggcgtgtc cgcactcgcc ggatgatctc cgccatttcc
     1561 cggacccgca tcgcggagag cgccgcgccg tacacggcca cgccgacgat caccccgacg
     1621 atcgcctcca ccagctccgg cgccccgccg gggagcgccg ccacggccag ggcgacggcc
     1681 accgtcatca ccccggcggc cacggcggtc cggaccagga cctggcgggt cttgaggtcg
     1741 acgccgaggc cccccgtccg acgggcgagc gcccgcagcg ccatcaccgc cgccacgccg
     1801 taggccacgg agaagccgaa ggccaggccc tggaccccga accagggata gagggccacg
     1861 gccaggacca cgttggcgag gttctcccag cagttgagga agaacggcgt ccgggtgtcg
     1921 tgcagggcgt agaacccccg cagcgcatac agataggcgg agaacggaag gaggccgacg
     1981 gcgaagaggg cgacgcaggt ggcggtggcg ccggcctcgg cggaggtcag cgcgccccgc
     2041 tggagcagca ggccgaccac cggccgggac agcaccaggt agccgccgac ggcgggcagg
     2101 atcaccagcg tcatcagccg caggccgagg gcgaagctcc gccggaaggc ggcgaactcc
     2161 cgccgggcga cggtctcggc cagctccggc gtcaacgtgg tcatcagcga gacggccacg
     2221 aggccgtggg gcagctgctg gaagacgtag gcgccctggt agatcgacac gccgcccttg
     2281 gtcccgttgg ccagcaccag gacgatccac agggccaact ggttcacggc cacgtagccc
     2341 gccgtccagc ccgagagccg gacgaccttg cggacggcgg gatggccgaa ccggaacacc
     2401 gggcggacac ggatcccggc ccggcgcacc gccggcagca gcggcagggc catggccacg
     2461 atccccgccg tcgtgccgag cccgagcagc cacagcgtgc ccgtgtcgtg ctgcacgccc
     2521 tccagcgtca ggcggctccg ggccaggtgg ggcagggcca ggaaaatgcc ggtgaccagc
     2581 aggttgttga agacgggggt gaccgccgga gcggcgaagc ggcggtgggc gttaaggagg
     2641 gcggtggcca cggccgtgat gccgta
//
LOCUS       DATGJT010000393         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_259775, whole genome shotgun sequence.
ACCESSION   DATGJT010000393 DATGJT010000000
VERSION     DATGJT010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259775"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..1810
                     /locus_tag="VKX24_06780"
     CDS             83..1810
                     /locus_tag="VKX24_06780"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HLJ08225.1"
                     /translation="MARAKVGTLNELKSKGCLSGKVGSQPVCVFWSEGEAYAVDDRCP
                     HMGFPLHRGTVENGLLTCHWHHARFDLSSGGTLDPFADDVRSHRVELEGDDVVVVLRA
                     EADPVARHLRRLDEGLEQGLTLVIAKAVLALADVLGADEGAAVALRAGVEFGVRNREA
                     GWGSGLTVLTAMGNVLPALAPPERCLALVHGLAFVSRDTRGRPPRFALSPLDGEVPAP
                     RLVSWYRRFLDTRNGDAAERVLATAASAGASPGDLAGLMGTGATDHVFVDGGHTIDFT
                     NKAFEVLEHLGWEHAATVLPSLAHQTAGASRSEETGAWRHPDDLAGLLSDIQSGGAVP
                     AGSGSLTDDDVDGLAWAILGDDAERIVAALETAAERGGTYEQLARAVAYAASLRLVRF
                     HTQNDHGDWDEVHHAFTTANAVHQMVRRAPDPQVARAIYQGAMKVFLDRFLNVPAARL
                     PEQHHLAQATPDLEHLSACWDQEGMVDDAGAIVYGWVRSGADQGEVIRALGAALLSED
                     AEFHWFQTYEASVRQAAAWPAGSEQAALILSGAARFLAAHTPTRRELSQVVSIATRLR
                     RGEALYEEV"
     gene            1888..>2335
                     /locus_tag="VKX24_06785"
     CDS             1888..>2335
                     /locus_tag="VKX24_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015923177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ08226.1"
                     /translation="MCPDVVVVGAGNAALCAALAAREAGASVAVLEAAPRAERGGNSA
                     FTGGAMRVPFSGEGALRALMPDLTEDEIESADFGSYSEQEFFADMARVSEHRADADLL
                     EVLVAHSSDTLLWMRDHGVRFEPSYGRQAFKVDGRFRFWGGLVLEVN"
BASE COUNT          326 a          832 c          823 g          354 t
ORIGIN      
        1 gacgggcacc cttgacctca acattggttg aactcttatg gtggggtcac ggtacggccg
       61 agcagcggga ggcgcaagga gcatggcacg ggcgaaggtc ggcaccctga acgagctgaa
      121 gagcaagggc tgtctttcgg gcaaggtcgg gtcgcaaccc gtgtgcgtgt tctggtccga
      181 aggtgaggcc tacgcggtcg acgaccggtg cccgcacatg ggcttccccc tccatcgggg
      241 cacggtcgag aacggcctgc tcacctgcca ctggcaccac gcccgattcg acctctcctc
      301 cggcgggacc ctcgacccct ttgccgatga cgtccggtcc caccgggtcg agctcgaagg
      361 tgacgacgtc gtcgtcgtcc tgcgcgccga ggcggatccc gtcgcgcgcc accttcggcg
      421 actggacgaa ggcctcgagc aggggctgac cctcgtcatc gccaaggcgg tcctggccct
      481 agccgacgtc ctcggagccg acgaaggggc ggcggtggcg ctccgggccg gggtggagtt
      541 cggggttcgg aaccgggagg cgggatgggg gtccggcctg accgtcctca cggcgatggg
      601 gaatgtcctt cctgccctgg caccgcccga gcgctgtctc gctctcgtcc acgggctcgc
      661 cttcgtgtcc cgagacaccc gggggcgacc gccccggttc gccctgtcgc cgctggacgg
      721 cgaggtcccc gcgccgcgac tggtctcctg gtaccgccgc ttcctcgaca cccgcaacgg
      781 cgacgccgcc gagcgagtgc tggcgacggc cgcgagtgcc ggggcctccc cgggcgacct
      841 tgccggcctc atggggaccg gcgccaccga ccatgtcttc gtcgacggcg gccacacgat
      901 cgacttcacc aacaaggcct tcgaggtgct cgaacacctc ggctgggagc acgcggccac
      961 cgtcctgccg tccctcgcgc accagacggc cggtgcttct cgctcggagg agaccggcgc
     1021 atggcgtcat cccgacgacc tggccggcct cctctccgac atccagtcgg ggggagcggt
     1081 ccccgcgggc tcaggttccc tgaccgatga cgatgtcgac ggcctggcgt gggcgatcct
     1141 cggcgacgac gcggaacgga tcgtcgccgc cttggagacc gcagccgagc gtggtggcac
     1201 ctacgagcaa ctggcgcggg cggtcgcgta cgcggcttcg ctccggctcg tccgcttcca
     1261 cacccaaaac gaccacgggg actgggacga ggtccaccac gcgttcacga cggccaacgc
     1321 ggtccaccag atggtgcgac gcgcccccga cccccaggtg gcccgggcga tctatcaggg
     1381 ggcgatgaag gtgttcctcg accgtttctt gaacgtgccc gcggcgaggc tcccggagca
     1441 gcaccacctg gcccaggcga cacccgatct cgagcacctg agcgcctgct gggaccagga
     1501 agggatggtc gacgacgccg gggcgatcgt ctacggatgg gtgcgttccg gggcggacca
     1561 gggcgaggtg atccgagcac tcggtgccgc gctcctcagc gaggacgccg agttccactg
     1621 gttccagacc tacgaggcat cggtccgcca agcggcggcc tggcccgcgg ggtccgagca
     1681 ggccgccctc atcctctccg gtgcggcgcg cttcctcgcg gcccacaccc ccacacggcg
     1741 cgagctctcc caggtggtgt cgatcgccac ccgtctccgc cggggcgaag ccctgtacga
     1801 ggaggtctga acccggcgcc tgcccggcgg acggctggga aaggccggaa cgatgtcctg
     1861 caggtcaaca cctaggctcc ctcctcggtg tgcccggacg tcgtcgtcgt cggtgccggt
     1921 aatgccgcgc tgtgcgcggc gctcgccgct cgcgaggccg gagcttcggt cgcggtgttg
     1981 gaggcggcgc cccgggccga gcgaggaggc aactccgcct tcaccggtgg tgcgatgcgg
     2041 gtcccgttct ccggggaggg ggcgctccga gccctcatgc ccgacctgac ggaggacgag
     2101 atcgagagcg ccgatttcgg gtcgtactcg gagcaggagt tcttcgccga catggcgcgg
     2161 gtctccgagc accgggccga cgccgacctg ctcgaggtgc tggtcgccca cagctcggac
     2221 accctgctct ggatgcgcga ccacggcgtc aggttcgagc cttcctacgg ccgccaggcg
     2281 ttcaaggtcg acggccgctt ccggttctgg ggcggtctcg tcctggaggt gaacg
//
LOCUS       DATGJT010000394         2342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_364186, whole genome shotgun sequence.
ACCESSION   DATGJT010000394 DATGJT010000000
VERSION     DATGJT010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364186"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..149)
                     /locus_tag="VKX24_06790"
     CDS             complement(<1..149)
                     /locus_tag="VKX24_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020580245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HLJ08227.1"
                     /translation="MDRQRISSGSPFEPTIGFSRAVRAGPHVFVSGTAPVWPDGSCDP
                     DPAVQA"
     gene            279..1052
                     /locus_tag="VKX24_06795"
     CDS             279..1052
                     /locus_tag="VKX24_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017982113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08228.1"
                     /translation="MEISGAAALVTGGASGLGEATVRRLAGAGARVVIVDRDTAKGEA
                     LSKELGSAAAAFAPTDVTSAADVGAAVELASSLGPLRIAVNCAGIGWAGRVVARDGSP
                     HDLDLFSTVISINLIGTFNVLRLAAAAMAATAPTETAERGVVVNTASIAAFDGQIGQI
                     AYAASKAGVVGLTLPAARDLAAVGVRVVTIAPGTFDTPMLALLPESQRQALAAGIPFP
                     SRLGDPAGDYASLVEHIVRNSYLNGETIRLDGALRMPPK"
     gene            complement(1066..2130)
                     /gene="mnmA"
                     /locus_tag="VKX24_06800"
     CDS             complement(1066..2130)
                     /gene="mnmA"
                     /locus_tag="VKX24_06800"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012256566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HLJ08229.1"
                     /translation="MARVLVAMSGGVDSSVAAARLKAAGHDVTGVTLKLWGGESDSGC
                     CSVSDVEDARRVAAQLGIPHYTFNFADDFTAAVVDPYVEAHAAGRTPNPCVECNRSIK
                     FGRLLERAEATGFDALATGHHARVVASPASGSLSSSPDGRRRFRLARGRDAAKDQSYV
                     LYMLAEAQLARLLLPVGEMTKADVRAEAAALGLRTAAKPESMEVCFITRGGRERFLAE
                     RGAMRAGDVVDPAGRILARHGGTARFTVGQRRGLGVAAGERRYVLDVDAATGAVTLGP
                     HEALLRADVRLTGLTWAGGAPPDPSEPVLVQVRAHGAPFDGCVDGDRVRFARPQPRVA
                     PGQVVALYRGDTVLGGGIAV"
     gene            complement(2133..>2342)
                     /locus_tag="VKX24_06805"
     CDS             complement(2133..>2342)
                     /locus_tag="VKX24_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase NifS"
                     /protein_id="HLJ08230.1"
                     /translation="VCASAGSSCASGALEPSHVLAAMGLPVDLARSSVRLTVGWPTTE
                     AEVDEAVGVITAGVGRLAGRAAARR"
BASE COUNT          302 a          900 c          878 g          262 t
ORIGIN      
        1 gcctgcacgg ccgggtcggg gtcgcacgac ccgtccggcc agaccggcgc cgtccccgag
       61 acgaagacgt gggggccggc ccgcaccgcc cgggagaacc cgatggtcgg ctcgaacgga
      121 gaccccgacg agatccgctg acgatccata gctcgcacct catcctcgcc ggcgccgccc
      181 cgcgcaactc ctggcgccga gctcggattc ggcgctcgcc cggatgctaa gggctcggat
      241 gccggagcag ccgcggccgg cccgtactgt gccgggccat ggagatatct ggagccgccg
      301 ccctcgtcac cggaggcgcc tcgggtctcg gagaggcgac cgtccgccgc ctcgccggcg
      361 ccggcgcccg ggtcgtcatc gtcgaccgcg acaccgccaa gggcgaggcg ctgtccaagg
      421 agctgggctc ggccgccgcc gccttcgccc ccaccgacgt gaccagcgcc gccgacgtcg
      481 gcgcggccgt ggagctcgcc tcctcgctcg ggccgctgcg gatcgccgtg aactgcgccg
      541 ggatcggctg ggccggccgg gtcgtggccc gggacggctc gccccacgac ctggacctgt
      601 tctccaccgt catctccatc aacctcatcg gcacgttcaa cgtcctgcgc ctggcggcgg
      661 cagcgatggc ggccaccgcg ccgaccgaga cggcggagcg gggcgtcgtg gtcaacacgg
      721 cttccatcgc cgccttcgac ggccagatcg gccagatcgc ctacgccgcc tcgaaggccg
      781 gcgtcgtcgg cctcacgctc ccggccgccc gcgacctggc cgccgtcggc gtgcgggtgg
      841 tgaccatcgc ccccggcacg ttcgacacgc cgatgctggc gctgctgccg gagtcgcagc
      901 gccaggcgct ggccgccggc atcccgttcc cgtcccggct cggcgacccc gccggcgact
      961 acgccagcct cgtcgagcac atcgtccgca acagctacct caacggcgag acgatccggc
     1021 tcgacggcgc actgcggatg ccgccgaagt agggaccgga ccgcctcaga cggcgattcc
     1081 gccgccgagc acggtgtcgc cgcggtacag cgccacgacc tgtcccggcg ccacccgggg
     1141 ctgcggacgg gcgaaccgca cgcggtcgcc gtcgacgcag ccgtcgaacg gcgcaccgtg
     1201 ggcccggacc tgcaccagca ccggctcgga cgggtcgggc ggcgccccgc ccgcccaggt
     1261 cagaccggtc aggcggacgt cggcccggag cagcgcctcg tggggcccga gggtgacggc
     1321 gccggtggcg gcgtccacgt cgaggacgta gcggcgctcg ccggcggcca cgccgaggcc
     1381 gcggcgctgc ccgacggtga agcgggccgt cccgccgtgg cgggcgagga tccgcccggc
     1441 ggggtcgacg acgtcgcccg cccgcatggc gccccgctcg gccaggaacc gttcccgtcc
     1501 gccccgggtg atgaagcaga cctccatgct ctccggcttg gccgcggtcc ggaggccgag
     1561 ggcggcggcc tccgcccgga cgtcggcctt ggtcatctcg ccgacgggca gcagcagccg
     1621 tgccagctgg gcctcggcca gcatgtacag gacgtaggac tggtccttgg cggcgtcgcg
     1681 gccccgggcc aggcggaagc gccggcgccc gtccggcgac gaagacaacg agcccgaagc
     1741 cggcgaggcc acgacccggg cgtggtggcc ggtggcgagg gcgtcgaagc ccgtcgcctc
     1801 ggcccgctcc agcagccgcc cgaacttgat cgaccggttg cactccacgc aggggttcgg
     1861 ggtgcggccg gcggcgtggg cctcgacgta ggggtcgaca acggcagcgg tgaagtcgtc
     1921 ggcgaagttg aaggtgtagt gggggatgcc gagctgggcg gcgacgcggc gggcgtcctc
     1981 cacgtcggag acgctgcagc agccggagtc cgactcgccg ccccagagct tgagggtgac
     2041 gccggtgacg tcgtggccgg cggctttgag ccgggcggcg gcgaccgacg agtcgacgcc
     2101 gccgctcatg gcgacgagca cccgggccat ggtcagcgcc gggcggcggc gcgcccggcg
     2161 aggcgcccga cgccggcggt gatcaccccg acggcctcgt cgacctcggc ctcggtggtc
     2221 ggccagccca cggtcaggcg caccgacgat cgggccaggt cgaccggcag gcccatggcg
     2281 gcgagcacgt gggagggctc cagcgccccc gaggcgcagg acgagccggc cgaggcgcac
     2341 ac
//
LOCUS       DATGJT010000395         2919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_156132, whole genome shotgun sequence.
ACCESSION   DATGJT010000395 DATGJT010000000
VERSION     DATGJT010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156132"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..1774)
                     /locus_tag="VKX24_06810"
     CDS             complement(209..1774)
                     /locus_tag="VKX24_06810"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014813982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HLJ08231.1"
                     /translation="MSAPSWNLADVVRTNRRVRSDAPAITYGSEVLTWADLDERSSRA
                     ASALAGERVGAGDRVAFVGKNSPAYFEVLFGAAKVGAVTVAVNWRLHPSEMAFIVKDA
                     GARLLVADEEFAGADELTAAAERVIVLGTAAASPSSVPYLDWVARCPAVDPGHVGAPE
                     EVTLQLYTSGTTGLPKGAMLTNANMGHLVNAAETMFEIDSDSVMIVVLPVFHIGGVGY
                     ALVGMAQGCHTILLRDFDPPAVLEALTDHRVTNALFVPAMLGALCAVPGAAERDYSAL
                     RSVMYGASPITEESLRTSLATFARPFVQVYGMTETTGAITQLSAADHDPDGPRSHLLR
                     SAGKPFAWVEARIVDPATGVDRATGEIGELWTRSPQNMAGYWNNPKATEETITAEGWL
                     KTGDAGYLDEDGYLFLTDRVKDMIVTGAENVYPIEVENALASHPAVADVAVIGVPDST
                     WGETVKAVVVLRPGAQADESELIAYARARIAHFKCPRSVDFIDVLPRNPSGKILKREL
                     REPYWRGQERAIS"
     gene            complement(1857..2792)
                     /locus_tag="VKX24_06815"
     CDS             complement(1857..2792)
                     /locus_tag="VKX24_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLJ08232.1"
                     /translation="MTTLPTATLGRTGLQVTKLGYGAMELRGPAGGRGREIDDATAGR
                     VLNQVLDSGIRLIDTSPDYGRSEELIGAHLSGRRDEFVLTSKCGCFVSPDGAPGFGEH
                     VFTRENVRAGVEQSLRRLRTDHLDAVQFHISPSWSTLQENDSVAELVALRDEGKVRFL
                     GMSGTLPNIEEHISTGVFDVFQIPYSAVERDHEETITKAARAGAGTIIRGGVARGIPA
                     APPEAMDRLPERFREAYAARRDRFDRAGLDDLQDGMSRMEFMLRFTISHPDLHTTIVG
                     TANPAHLEANLEAASKGPLPPDVYAEAKRRLDAVA"
BASE COUNT          401 a         1031 c         1056 g          431 t
ORIGIN      
        1 cgggcccacg agcgcgaggg ttgggagctc ggttggttcc agcgagagtt cctcgtgccc
       61 ctggaactgg actgcatgcg ggacagggcg cgcggaccgg tcgcgaccgt cggcggggtc
      121 ctcgacgcgc tccaccgggc ccgcccggac cccaggccca ccaagccccg cgaccggtcc
      181 gggggcgggc gagcgcggag ggacgcagtt agctgatggc cctctcctgg ccccgccagt
      241 agggctctcg caactcccgc ttgaggatct tccccgacgg attgcgcggc aggacgtcga
      301 tgaagtcgac cgacctcggg cacttgaagt gggcgatccg cgcccgggcg taggcgatca
      361 gctcgctctc gtcggcctgc gccccgggac ggaggacgac caccgccttc accgtctcgc
      421 cccaagtgga gtcgggcacg ccgatcacgg cgacgtcggc gaccgccgga tggctggcga
      481 gcgcgttctc gacctcgatc gggtagacgt tctcggcccc cgtcacgatc atgtccttca
      541 cccggtcggt gaggaacagg tacccgtcct cgtcgaggta cccggcgtcg cccgtcttga
      601 gccagccctc ggccgtgatc gtctcctcgg tcgccttcgg gttgttccag tagccggcca
      661 tgttctgcgg cgaacgcgtc cacagctcgc cgatctcccc ggtggcgcgg tcgacgccgg
      721 tcgccgggtc cacgatcctc gcctccaccc aggcgaaggg cttgccggcc gaccgcagga
      781 ggtgggatcg gggcccgtcg gggtcgtggt ccgcggcgga cagctgggtg atggcgccgg
      841 tggtctcggt catgccgtag acctgcacga acggtcgggc gaacgtcgcc agggaggtcc
      901 gcaggctctc ctcggtgatc ggtgaggcgc cgtacatcac cgagcggagc gcggagtagt
      961 cgcgttccgc ggcccccggg accgcgcaga gcgcaccgag catcgccggg acgaagaggg
     1021 cgttggtgac ccggtggtcg gtcagcgcct cgaggaccgc gggcgggtcg aagtcgcgca
     1081 ggaggatggt gtggcacccc tgggccatcc ccaccagcgc gtagcccact cccccgatgt
     1141 ggaagaccgg gaggacgacg atcatgaccg agtccgagtc gatctcgaac atggtctccg
     1201 ccgcgttcac gagatgaccc atgttggcgt tggtgagcat ggcgcccttc ggcaaccccg
     1261 tcgtccccga ggtgtaaagc tggagcgtca cctcttcggg ggccccgacg tggccggggt
     1321 cgaccgccgg gcagcgggcc acccagtcga gataggggac cgacgacggg gaggccgcgg
     1381 ccgtcccgag cacgatcacc cgctcagcgg cggccgtgag ctcgtcggcg ccggcgaact
     1441 cctcgtcagc gaccagcaga cgggcgccgg cgtccttcac gatgaaggcc atctcgctcg
     1501 ggtgcagccg ccagttgacc gcgacggtga ccgccccgac cttggccgcc ccgaagagca
     1561 cctcgaagta ggcgggcgag ttcttgccga cgaaggcgac ccggtcaccg gctccgaccc
     1621 gctcgccggc gagggccgag gcggcccggc tcgaccgctc gtcgaggtcg gcccaggtga
     1681 ggacctcgga tccgtaggtg atcgccgggg cgtcggagcg gacccggcgg ttggtccgga
     1741 cgacgtcggc caagttccag ctcggcgcgc tcatcgctcc ctcccccgct ccggacgacg
     1801 gatcctggtc accctaccga acggccggtc accgggcccg gtcgaggcgc gctcggtcag
     1861 gcgacggcgt ccaggcgccg cttcgcctcg gcgtagacgt ccgggggcag cgggcccttg
     1921 gaggcggcct cgaggttggc ttccaggtgc gccgggttgg cggtgccgac gatcgtggtg
     1981 tgcaggtccg gatggctgat cgtgaaccgg agcatgaact ccatccggga catcccgtct
     2041 tggagatcgt cgagcccggc ccggtcgaag cggtccctcc gggcggcata ggcctcccgg
     2101 aaccgttcag gcagtcggtc catcgcctcg ggcggcgcgg cggggatgcc ccgggccacc
     2161 ccgccccgga tgatcgtgcc tgcgccggcc cgggcggcct tcgtgatcgt ctcctcgtgg
     2221 tcccgctcga ccgccgagta cgggatctgg aacacgtcga acacgccggt cgagatgtgc
     2281 tcctcgatgt tgggcagcgt ccccgacatc ccgaggaacc ggaccttgcc ctcgtcgcgc
     2341 agggcgacca gttcggccac cgagtcgttc tcctgcaacg tgctccagga ggggctgatg
     2401 tggaactgca ccgcgtccag gtggtcggtg cgcaggcggc gaaggctctg ctccactccc
     2461 gcccggacgt tctcgcgggt gaacacgtgc tcgccgaacc cgggggcgcc gtccgggctg
     2521 acgaagcagc cgcacttgga ggtcaggacg aactcgtcac gccgaccgga gaggtgggca
     2581 ccgatgagct cttcggatcg gccgtagtcc ggggaggtgt cgatgagcct gatccccgag
     2641 tcgagcacct ggttcaggac ccgaccggcg gtcgcgtcgt cgatctcccg gccccggccg
     2701 ccggccggcc cgcgcagttc catcgccccg tagccgagct tggtgacttg gaggccggtg
     2761 cggccgagcg ttgccgtggg aagcgtggtc atctcccctt cgtaccagac gagcgccgtg
     2821 gtcgaggcgg gccgacacct ccaaggtcgc ccggcgcgtc cacaccggcg acccccggcg
     2881 ccggccccac gagcgaagtg cgctggtcag cgggctggg
//
LOCUS       DATGJT010000396         3258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_52763, whole genome shotgun sequence.
ACCESSION   DATGJT010000396 DATGJT010000000
VERSION     DATGJT010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3258
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52763"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1303
                     /gene="groL"
                     /locus_tag="VKX24_06820"
     CDS             <1..1303
                     /gene="groL"
                     /locus_tag="VKX24_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006542645.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HLJ08233.1"
                     /translation="AGANPMTLKKGIEKAVVEAVAAIKSQAKEVESKDQISNVAAISA
                     ADPEIGSTIAEAMEKVGKDGVITVEESQTFGMDLDMVEGMRFDKGYISPYFVTDPERM
                     EAVLEDPYVLYVSSKISAVKDLLPVLEKVMQAGRPLVIIAEDLEGEALATLVVNKIRG
                     TFRSVAVKAPGFGERRKAMLQDMAILTGGQVISEEVGLKLENVTLDLLGKARKVTVTK
                     DETTIVEGAGSKEDVQGRINQIRAEIENTDSDYDREKLQERLAKLSGGVAVIKVGAAT
                     EVELKEKKHRIEDAVSTTKAAVEEGVVPGGGVALLRAQAKVRTFAETLEGDEATGAKM
                     VARSLEEPLKQIAVNAGMEGGVVVEKVRQLKGANGLNAATGEYEDLVKNGIIDAAKVT
                     RSALQNAASIAALFLTTECVIADKPEKESAPAMPGGGMDDF"
     gene            1527..>3258
                     /locus_tag="VKX24_06825"
     CDS             1527..>3258
                     /locus_tag="VKX24_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08234.1"
                     /translation="MGYQGKSGRIRAAAALAAVLAAASTVAAYALDGGSLLAPILAPG
                     AVAPFAAGAGGYAGFATGTVLHAGVVGSLAGLDFVSSTAAATSAPSTSPVNSELGRVA
                     LPALPAKGSYGQGTGLGLSVGLLPGLSTGLFGNASAVAPPSTAPVEQDAGPVSLPPLV
                     SLTPFRGQAQALSSATACVLGSNLAFGRAQAADLSLGGQTALAVGAPAGRGAAGQPVA
                     DSESSTVVVQGSEPGRLGLLSETTQTLAPVTFLAGTGNQVTVNLLGKWALRVSADGRT
                     GTVSYGPQVSATDQAVLQVSNAAGAVVDTASAGQLQAAGDLGLHIPVAGGEIVVGERP
                     RARGRTTPAEASATGADAAVDLVRARLLGQDVRLGHMEAAVAVPPAGVTCPGLQVSVT
                     PAVASVAPGDTFAATVTVRNPNEGTANDVAIATRFAADPGIDVRPAAVSVGGKQFAFG
                     LEGLKLTTPLGPGQAVDVPMAVRVVDATRPGRIRLGATASGRYGDGPLAVPATGAADV
                     DGPAVSAVVAPAAQNSAAGAAPATPGVAAPAGSGRRSPARASAGTTGAAGSAASAAPA
                     APATPVPAPPP"
BASE COUNT          450 a         1237 c         1168 g          403 t
ORIGIN      
        1 cgccggcgcc aacccgatga cgctgaagaa gggcatcgag aaggctgtcg tcgaggccgt
       61 cgcggccatc aagagccagg ccaaggaggt cgagtcgaag gaccagatct ccaacgtcgc
      121 cgccatctcc gccgccgacc ccgagatcgg ctccaccatc gccgaggcga tggagaaggt
      181 cgggaaggac ggcgtcatca ccgtcgagga gagccagacc ttcgggatgg acctcgacat
      241 ggtcgagggc atgcgcttcg acaagggcta catctcgccc tacttcgtca ccgaccccga
      301 gcggatggag gcggtcctgg aggaccccta cgtcctctat gtctcctcca agatctcggc
      361 cgtgaaggac ctgctgcccg tcctcgagaa ggtcatgcag gccggccggc cgctggtcat
      421 catcgccgag gacctggaag gcgaggccct cgccaccctg gtggtcaaca agatccgggg
      481 cacgttccgg tcggtggcgg tcaaggcccc cggcttcggc gagcgccgca aggcgatgct
      541 ccaggacatg gccatcctca ccggcgggca ggtcatctcg gaagaggtcg gcctcaagct
      601 cgagaacgtc acgctcgacc tgctgggcaa ggcccgcaag gtcacggtca ccaaggacga
      661 gaccaccatc gtcgaggggg ccggctccaa ggaggacgtg cagggccgga tcaaccagat
      721 ccgggccgag atcgagaaca ccgactccga ctacgaccgg gagaagctcc aggagcgcct
      781 ggccaagctc tccggcggcg tggccgtcat caaggtcggg gccgccaccg aggtggagct
      841 gaaggagaag aagcaccgca tcgaggacgc cgtgtcgacc accaaggcgg cggtcgagga
      901 gggcgtcgtc cccggcggcg gcgtggccct gctgcgggcc caggccaagg tgcggacctt
      961 cgccgagacc ctggagggcg acgaggccac cggcgccaag atggtggccc ggtcgctgga
     1021 ggagccgctc aagcagatcg ccgtcaacgc cggcatggag ggcggcgtgg tggtcgagaa
     1081 ggtgcggcag ctcaagggcg ccaacggcct caacgccgcc accggcgagt acgaggacct
     1141 ggtgaagaac ggcatcatcg acgccgccaa ggtgacccgc tcggcgctcc agaacgccgc
     1201 ttcgatcgcc gcgctcttcc tcaccaccga gtgcgtcatc gccgacaagc cggagaagga
     1261 gtccgccccg gccatgcccg gcggcgggat ggacgacttc taagcctcct caagcctgac
     1321 caagagaagt tcatcgccgg cggggcgcct tcgggtgccc cgccggtgat ttttcgcccc
     1381 ttcgtcccgt cccgtccctt tcgcccccca ccccggccgc ccggggccgt gcgacgcggc
     1441 aggtcttttc cgccccgcgt cgaacaaacc ggtcacagcg gacttaccac tctgagtggc
     1501 caaaccaggg cggaacaggc gagaccatgg ggtaccaggg caaatcaggg cggatccggg
     1561 cagcggcggc cctcgccgcc gtcctggcgg cggcttcgac cgtggccgcc tacgccctcg
     1621 acggcgggtc gctcctggcg ccgatcctgg ccccgggggc ggtcgccccc ttcgccgctg
     1681 gcgccggcgg gtacgccggc ttcgccaccg gcaccgtcct ccacgccggc gtcgtcggct
     1741 cgctggccgg gctcgacttc gtgtcgtcca ccgccgccgc cacctcggcg ccgtcgacct
     1801 cgccggtcaa cagcgaactc ggccgggtgg cgctgccggc cctgccggcc aagggcagct
     1861 acggccaggg gaccggtctc ggcctctccg tcggcctgct gcccgggttg tcgaccgggc
     1921 tgttcggcaa cgcctccgcg gtggcgccgc cgtccaccgc gccggtggag caggacgccg
     1981 gcccggtctc gctcccgccc ctcgtcagcc tgacgccgtt ccggggccag gcccaggcgc
     2041 tgtcgtcggc cacggcctgc gtgctgggct ccaacctcgc cttcggacgg gcgcaggcgg
     2101 ccgacctctc gttgggcggc cagaccgccc tggcggtcgg cgcgccggcg ggccggggcg
     2161 ccgccgggca gccggtggcg gactccgagt cgagcaccgt ggtggtccag ggctcggagc
     2221 ccgggcgcct cgggctgttg agcgagacga cccagacgct ggcccccgtc acgttcctgg
     2281 ccgggacggg gaaccaggtg acggtcaacc tgctcggcaa gtgggcgctg cgggtcagcg
     2341 ccgacgggcg gacgggcacg gtgtcctacg ggccgcaggt gtcggccacc gaccaggcgg
     2401 tgctgcaggt cagcaacgcc gccggcgccg tcgtcgacac ggcgagcgcc gggcagctgc
     2461 aggcggccgg ggacctcggg ctgcacatcc cggtcgccgg cggggagatc gtcgtcggcg
     2521 agcgcccccg ggcccggggc cgcaccaccc cggccgaggc ctccgccacc ggcgccgacg
     2581 ccgccgtcga cctcgtgcgg gctcggctgc tgggccagga cgtccgcctc ggccacatgg
     2641 aggcggcggt ggccgtcccg cccgccggcg tcacctgccc cggccttcag gtctcggtca
     2701 cgcccgccgt ggccagcgtc gctccgggag acacgttcgc cgccaccgtc acggtccgca
     2761 accccaacga gggcacggcc aacgacgtcg ccatcgccac ccgcttcgcc gccgaccccg
     2821 gcatcgacgt ccggcccgcg gcggtgtcgg tgggcgggaa gcagttcgcc ttcgggctcg
     2881 aggggctgaa gctgacgacg ccgctcggcc ccggccaggc cgtcgacgtc ccgatggccg
     2941 tccgggtcgt ggacgccacc aggcccggtc gcatccgcct cggggcgacg gcctccggcc
     3001 gttacggcga cgggccgctg gcggtcccgg ccaccggcgc cgccgacgtc gacggtcccg
     3061 cggtcagcgc cgtcgtggcg ccggccgccc agaactccgc cgccggggcg gcgccggcaa
     3121 cgcccggcgt cgccgccccg gcgggcagcg ggcgccgtag tcctgcccgc gcctcagccg
     3181 gcaccaccgg ggcggcgggc tcggccgcct ctgccgctcc ggcggcgccg gccactcctg
     3241 ttcccgctcc gccgcccg
//
LOCUS       DATGJT010000397         2121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_52841, whole genome shotgun sequence.
ACCESSION   DATGJT010000397 DATGJT010000000
VERSION     DATGJT010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52841"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..554
                     /locus_tag="VKX24_06830"
     CDS             240..554
                     /locus_tag="VKX24_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HLJ08235.1"
                     /translation="MATASPEDTAMMVKAYNQYTEAVQAAGVFESGDGLQPTGTATTV
                     RVRDGQASTTDGPFAETKEALGGFYVLKCEDLDEAIEWAAKIPGASYGSIEVRPIINY
                     EG"
     gene            581..1822
                     /locus_tag="VKX24_06835"
     CDS             581..1822
                     /locus_tag="VKX24_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020579694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ08236.1"
                     /translation="MFRAERGRAVATLIRLTGDFDVAEEAVQEAFLVALERWPGDGLP
                     ANPAAWIMVTARNRAIDRLRAERRAAEGHRALAGLAALEADRAAWGSAGAEPPPDDAF
                     PDDRLRLIFTCCHPALAPEAQVALTLRTLGGLTTQEIARAYLVPEATMAQRLVRAKRK
                     IKVAAVPFAVPPERLLPERLRSVLAVLYLIFNEGYAATAGDTMVRRELAAEAIRLARV
                     LVAGMPGEAEASGLLALMVLHDSRRATRESADGELVLLEDQDRTRWDRQEIEEGLALV
                     ARFAARPTGPYQVQAAIAAVHAAARRPGDTDWRRIANLYRMLGDLAPSPVVELNRAVA
                     VAMAEGPQAGLEAMAGLAGDLDQYYLYHSARADLLRRLGRSAEAAAAYERALNLTANA
                     VERRFLRSRLAEVRCINRPTR"
     gene            1834..2082
                     /locus_tag="VKX24_06840"
     CDS             1834..2082
                     /locus_tag="VKX24_06840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08237.1"
                     /translation="MEPKPLFDQVNEGQVLYVSWNDFRRLLEACGFKYQGPRGIRHVF
                     AHPRIPDPLVLQVLRNQDAKPEDILKFVELAKEYNLKP"
BASE COUNT          308 a          789 c          754 g          270 t
ORIGIN      
        1 cgtccccgcc ccccggctac ccgccaccgc cccccggcta cccgccaccg ccccccggct
       61 acccgccacc gccgccgggc gggtggtcgc cctagaaccg caaacttttt tggccggggc
      121 tgtcgatcct gggcctcccc accgtagata tggtgaaggc gccaacgggg cgctggggga
      181 aacgggagga gagaacgatg cctaggtaca tggcgctgat ctacgggtcc gaggcgggaa
      241 tggcgacagc gtcgccggag gacacggcga tgatggtcaa ggcctacaac cagtacaccg
      301 aggcggtcca ggcggccggt gtcttcgaga gcggcgacgg cctgcagccg accggcacgg
      361 cgacgacggt ccgggtgcgc gacgggcagg cctccaccac cgacgggccg ttcgccgaga
      421 ccaaggaggc cctcggcggc ttctacgtcc tgaagtgcga ggatctcgac gaggcgatcg
      481 agtgggcagc caagatcccc ggggcgagct acggctcgat cgaggtgcgc cccatcatca
      541 actacgaggg ctagcgcccg cggacgaggt cgtcggccgc ctgttccgcg ccgagcgcgg
      601 gcgggcggtc gcgaccctga tccggctgac cggcgacttc gacgtcgccg aggaggcggt
      661 ccaggaggcg tttcttgtcg ccctcgagcg ctggcccggc gacggcctcc cggccaaccc
      721 ggcggcctgg atcatggtga ccgcccgcaa ccgggcgatc gaccggctcc gcgccgagcg
      781 gcgcgccgcc gagggccacc gggcgctcgc cggcctcgcc gccctggagg cggaccgggc
      841 cgcctggggt tcggccgggg cggagccgcc gccggacgac gccttcccgg acgaccggct
      901 ccggctgatc ttcacctgct gccacccggc cctcgccccc gaggcgcagg tcgccctgac
      961 cctccgcacc ctcggcggcc tgacgacaca ggagatcgcc cgggcctacc tcgttcccga
     1021 ggcgacgatg gcgcagcgcc tggtgcgggc caaacgcaag atcaaggtgg ccgccgtccc
     1081 gttcgccgtg ccgccggagc ggctgctgcc ggagcgcctg cggtcggtgc tggccgtgct
     1141 ctacctcatc ttcaacgagg gctacgccgc caccgccggc gacacgatgg tccgccggga
     1201 gctggccgcc gaggcgatcc ggctcgcccg ggtgctggtg gcagggatgc ccggggaggc
     1261 ggaggcgtcg ggcctgctgg ccctgatggt gctccacgac agcaggcggg cgacccggga
     1321 gtccgccgac ggcgagctgg tcctgcttga ggatcaggac cgcacccgct gggaccggca
     1381 agagatcgag gagggcctgg ccctggtcgc ccgcttcgcc gcccggccga ccgggccgta
     1441 ccaggtccag gcggccatcg ccgcggtcca cgccgccgcc cgccgccccg gggacaccga
     1501 ctggaggcgg atcgccaacc tgtaccggat gctgggcgac ctggcgccat cgccggtggt
     1561 cgagctgaac cgggcggtgg ccgtcgccat ggccgagggg cctcaggccg gcctggaggc
     1621 gatggccggc ctggccggcg acctcgacca gtactacctg taccactcgg cccgggccga
     1681 cctgctccgc cggctcggcc ggagcgccga ggctgccgcc gcctacgagc gggcgctgaa
     1741 ccttacggcc aacgccgtcg agcgccggtt cctgcggagc cggttggccg aggttcgttg
     1801 cataaaccga ccgaccaggt agcattccag gccatggaac cgaaaccgct gttcgatcag
     1861 gtcaacgaag gccaagtcct gtatgtgtcc tggaacgact tccgccgcct cctcgaggcg
     1921 tgcggcttca agtaccaggg tccccgcggc atccggcacg tcttcgccca cccgaggatc
     1981 ccggacccgc tcgtgctgca ggtgctgcgc aaccaggacg ccaagcccga ggacatcctg
     2041 aagttcgtcg agctggccaa ggaatacaac ctcaagccgt agccggcggg ggtcacagcc
     2101 agcactacgg tccgccgccc c
//
LOCUS       DATGJT010000398         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_156499, whole genome shotgun sequence.
ACCESSION   DATGJT010000398 DATGJT010000000
VERSION     DATGJT010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156499"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..303)
                     /locus_tag="VKX24_06845"
     CDS             complement(97..303)
                     /locus_tag="VKX24_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08238.1"
                     /translation="MGAVVCLSSLYFLRVPNRRAQSLMIVSVTALLTFELLLTILLST
                     PFSGDVSIPSRPLRSGALARLYEG"
     gene            1620..>2021
                     /locus_tag="VKX24_06850"
     CDS             1620..>2021
                     /locus_tag="VKX24_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08239.1"
                     /translation="MVVVATIGIAFVGPLISPAGAEAASGCRSGNPLANVWGPQRLKV
                     LSPCKTVSGTIVASDVQADGDGHYYMRVDKPYAGLLNKTNQKVHGGTLILEIVPADQP
                     GCIKGHKVKDGVCTGAHLAKPKIGQHVTVTGP"
BASE COUNT          341 a          729 c          668 g          283 t
ORIGIN      
        1 cggaccgagt ccctcccctg gcgcgctccg acggggtcgg gtctgtcacc agggtcgaac
       61 acccggccga ccgtgacccg ccgaggcccg ggtcgctcac ccctcgtata agcgggcgag
      121 ggcgccgctc ctgagcgggc ggctggggat ggacacgtct ccggagaacg gggtgctgag
      181 gaggatcgtg aggagcagtt cgaaggtcag cagcgccgtg acgctgacga tcatcaacga
      241 ctgggctcga cggttcggca cccgcaggaa gtacagcgac gacaggcaga cgaccgcacc
      301 catgaggatg agcgcctcca ggggcccggg gaggccgtcg ctggtcgagg cgaagagccg
      361 ctgacgacgc caacaccgct gagttcagcg cccccaccac ctcggagtgg aacgtcacgt
      421 cgctcggcgt cgccggctgg aagctctgaa cgccggcgaa gagggccgag aggcgggcgt
      481 ccgcctccgg gtcctccttc ccctcggcca gaagcggcca ctcgtggtcg atcacgtccg
      541 tgatgtagtc cccgacccgc gccgtgatcg cggccctcgt cgactccggg aagccacggc
      601 tgtcggtcac gacctggtcc tgggcggtgg cctccgagaa caccgcctcc tgggcggacc
      661 ggtagttctc ccccacggac acgatgacga acgccagcac cagcccgtag aggccggtga
      721 ccacggcgag gagcgccccg gcgacgtcgt tgtattccca gggccggtcg cggggcagcc
      781 accgccggac gagcccgttg cccggcatgg acagcgccac cgctccgccg accacggcga
      841 tgaccagcgg ccaggtgggg acatcgttga gcacccgctg agttgtggtg gtcgccacca
      901 tcgaccgcca tcctcgttcg ggacggggtg tatccgccag cgggcagctc cacaacaccg
      961 gtcaccaacg acactctgct gacggccgcg tcctcgacaa ccggtggggt aagcccccaa
     1021 aaccggagcc ccgaaggccg cccccattgc gcgttgggat ccccagttcc gaccggcggc
     1081 ctcaagggtc cgctccgccg gccttcggcc gcctcgcacc acggcactcc gctgcgaccg
     1141 ctccaacgta ccccggcgag cagcctgtcg agcacctcgt agttggtgcg ccgcctacgc
     1201 agcatgttcg agccccccgg ccaggagggc ggttgcgtca ggagtaaggc accatcgccg
     1261 ggactgtcac aaaccgtctt ccttttcggc gcgccagggc cctccgtccc gcggttcgtg
     1321 gtcctcggaa cggagggcgg cgcgacgcgc cccccagcag ggcgtcacgc tgaggattcg
     1381 agcggcgcgg gccgttttcc tcgaatcttt tgatttcgaa accgaaagtt cttgtccgcg
     1441 caatcttgtc ggccgagacc gtcctacggc caagttacgt gcggggaaag ggtttccgcg
     1501 tttccctcga accgggggga aggccgcgga tcgccgccga accggtccag atcggcgtcg
     1561 gctccgacgc gccgcgatca aggaggaacc ggatcttgag gacctggaca ctgcaacgca
     1621 tggttgtcgt cgccacgatc ggcatcgcct tcgtcgggcc gctgatcagc ccggccggcg
     1681 ccgaggcggc ctccggctgc cggagcggca acccgctggc caacgtctgg ggcccccagc
     1741 gtctgaaggt gctgagcccc tgcaagacgg tgagcggcac gatcgtcgcc tctgatgtcc
     1801 aagccgacgg cgacggccac tactacatgc gggtcgacaa gccctacgcc ggcctcctca
     1861 acaagaccaa tcagaaggtg cacggcggaa ccctcatcct ggaaatcgtc cccgccgacc
     1921 agcccggctg catcaagggc cacaaggtca aagacggagt ctgcaccggc gcccacctgg
     1981 ccaagccgaa gatcggccag cacgtgaccg tcaccggccc c
//
LOCUS       DATGJT010000399         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_156576, whole genome shotgun sequence.
ACCESSION   DATGJT010000399 DATGJT010000000
VERSION     DATGJT010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156576"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..419)
                     /locus_tag="VKX24_06855"
     CDS             complement(78..419)
                     /locus_tag="VKX24_06855"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HLJ08240.1"
                     /translation="MQTGWVLRDGQVLAAAEVADTFLERSRGLIGKRTYDGAMLLPRT
                     RSIHSFGVRFSLDVAFLDRHMRVVSTVRLRRWGVTLPRLRASQTLEAKAGSFERWGLK
                     TGDELEFRPTP"
     gene            complement(432..1520)
                     /gene="ychF"
                     /locus_tag="VKX24_06860"
     CDS             complement(432..1520)
                     /gene="ychF"
                     /locus_tag="VKX24_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015011412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HLJ08241.1"
                     /translation="MAMERLGLVGLANAGKSSLFNALTGGHAVVAAHPFSTVETTVGV
                     APLPDARLDQLARLSHSAKVIHAGVEFVDIAGLVAGSASGEGMGNRFLAGIREVDALV
                     LVLRAFHDDAVTGTDDPLESLETLELELVLADVASLETQAEKRRKQARLRKDATLAAE
                     ADAIDEAMAVLQTGVPLFRSDLAAPVREQLRNSFLLTNKPVLAVVNVGEDQLESVDEL
                     CAPVAAHLGSAGEAIGVCVQLEAEAAQLDPAERVELLEGLGLGEGVVPRVAHAAFHLL
                     GLRTFLTTGEKESRAWTFRAGALAPECAGVIHSDLQRGFIRAEVIHWDELVELGGWQH
                     AKTAGKLRVEGKDYAVQDGDVLEIRFNV"
     gene            complement(1624..1950)
                     /locus_tag="VKX24_06865"
     CDS             complement(1624..1950)
                     /locus_tag="VKX24_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08242.1"
                     /translation="MAEHEGPGELDRRSFLRKMAAAGFALPVVTTFAGADASATPVTT
                     IGGSTTLGATTTPPPSTTAATTTPAPTTTPRPSTTPRPTTTFKNPEHHHHHHHHHHHH
                     HHHRPE"
     gene            complement(1999..>2208)
                     /locus_tag="VKX24_06870"
     CDS             complement(1999..>2208)
                     /locus_tag="VKX24_06870"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family peptide modification chaperone"
                     /protein_id="HLJ08243.1"
                     /translation="EDGLVVYQGRPERVHHLNNTAAFVFVLSTGDRTVAEIAEECRRH
                     FGLDAPPLATVTTCVEDLRSLGLVV"
BASE COUNT          322 a          776 c          802 g          308 t
ORIGIN      
        1 tctcgcccgc acggacaggt cgccgaggtt cccgatcggg gtggccacca cgacgagcga
       61 gccgccagcg ggggcgctca cggcgtcgga cggaactcga gctcgtcgcc ggttttcagg
      121 ccccagcgct cgaaggatcc ggccttggcc tcgagggtct gggacgcccg gagccggggc
      181 agcgtcacgc cccaacgccg gaggcgcacg gtcgacacga cccgcatgtg ccgatccagg
      241 aaggccacgt ccagcgagaa gcggacaccg aaggagtgga tcgagcgcgt gcggggcagg
      301 agcatcgccc cgtcgtaggt ccgcttgccg atcagccccc ggctccgctc gaggaaggtg
      361 tcggcgacct cggcggccgc gagcacctgc ccgtcgcgaa gcacccaacc ggtctgcatg
      421 cccgccaacc cctacacgtt gaagcggatc tcgagcacgt caccgtcctg gaccgcgtag
      481 tccttcccct ccacccggag cttcccggcc gtcttggcgt gctgccagcc acccaactcg
      541 acgagctcgt cccagtggat cacctcggcc cggatgaacc cgcgttggag gtccgagtgg
      601 atcacgcccg cgcactccgg agccagggcg ccggcgcgga aggtccaggc gcgtgactcc
      661 ttctccccgg tcgtgaggaa ggtccgtagc ccgaggaggt ggaacgccgc gtgcgccacc
      721 cggggcacga ccccctcgcc gagaccaagg ccctcgagca gctcgacacg ctcggccggg
      781 tccagctgcg ccgcctccgc ctccagctgc acgcagaccc cgatcgcctc gccggcggag
      841 cccaggtggg cggccaccgg cgcgcagagc tcgtcgacgg actcgagctg gtcctcgccg
      901 acgttgacca cggcgagcac gggcttgttg gtcagaagga aggagttccg gagctgctct
      961 cgcaccgggg ccgcgaggtc cgaacggaag aggggcaccc cggtctggag cacggccatg
     1021 gcctcgtcga tggcgtcggc ctcggccgcc agcgtggcgt ccttgcgcag cctggcctgc
     1081 ttgcgccgtt tctcggcctg ggtctcgagc gacgcgacgt cggccagcac gagctcgagc
     1141 tccagggtct ccaacgattc gagtgggtcg tcggtgcccg tgaccgcgtc gtcgtggaag
     1201 gcccggagga cgagcaccaa cgcgtcgacc tcccggatcc cggccaggaa ccggttgccc
     1261 atgccctcac cggaggcgga cccggccacc aggccggcga tgtcgacgaa ctccactccg
     1321 gcgtggatca ccttggccga gtggctgagc cgggccagct ggtcgagtcg ggcatccggg
     1381 agcggggcga cccccacggt cgtctcgacg gtggagaacg ggtgcgccgc cacgacggca
     1441 tggccgccgg tcagggcatt gaagagcgag gacttgccgg cattggccag tccgaccagg
     1501 ccgaggcgct ccatcgccaa aagacgctac tggcccccga gacccccccg gcgggggtct
     1561 gtcgacgcgg gctcggggcc gacgttcatc cccgcggcgc catccggccg ctcggacgac
     1621 ggatcactcc ggacggtggt ggtggtggtg gtgatggtga tgatgatggt ggtggtggtg
     1681 ctcggggttc ttgaaggtcg tggtcggccg aggtgtcgtc gacggacgcg gtgtcgtggt
     1741 cggagccggt gtcgtcgtgg ccgccgtggt ggacggtggg ggggtggtgg tcgcccccag
     1801 cgtggtcgac ccgccgatcg tcgtcaccgg ggtcgccgat gcgtcggcgc cggcgaaggt
     1861 ggtcaccacc ggcagcgcga acccggcagc ggccatcttt cggaggaacg agcgacggtc
     1921 gagctcgccc ggcccctcat gctcagccac attgcctccc ctcgacggcg ggatactagg
     1981 gcctcaggac ggcctgggtc agacgacgag cccgagggac cggaggtcct ccacgcacgt
     2041 ggtcaccgtc gcgagcggcg gagcgtccag gccgaagtgc cggcggcact cctcggcgat
     2101 ctcggccacc gtccggtcgc cggtggagag gacgaacacg aaggcggccg tgttgttcag
     2161 gtggtgcact cgctccgggc gaccctggta gacgaccagg ccgtcctc
//
LOCUS       DATGJT010000400         2362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1297760, whole genome shotgun sequence.
ACCESSION   DATGJT010000400 DATGJT010000000
VERSION     DATGJT010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297760"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..1978
                     /locus_tag="VKX24_06875"
     CDS             179..1978
                     /locus_tag="VKX24_06875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08244.1"
                     /translation="MYKASLGLVGVAAVALIYGWVRQSNPATWFSIVAAIVAGLLLVA
                     SWLLERVRGGGADFSPSGAADASGGGTWTAPAPSSSAWSPAGSSSPSRRSPAEEFTPD
                     FDSADDGPRGASASASSAPAQFAPGLYEPAPGLYEPEATMAMPPAEVEESKRRFGRKA
                     SAPSAPATSAVDERVAELRALSESTSAELFSFTEEDESTESRLARAQQEAEDLLAQPV
                     ESFRAPEPARPAAPPPPPPPVAAPRAPEPMRGAPSHEQDEWLQAAMRRREARRAATGS
                     GDAAGIASRGPDADEPDASVPSSIAPAGGPAPAWTPPPGAPPPGRAAAPPAAPPAARP
                     AAAAPAPTASVAAPPAPATAPAAPAPARPGVEEEGEALTWSQRRRRTRLGAEPAPDYE
                     LREVPSSPVPSRRRSRAEEPDEEADFELIPVPGEELPEELPEELAVEEEEEEVEEPQE
                     VAARPPSWSRRTASSFAGEAPASGGRSPAPAKAAGRRAPAPSAAKAAPAKAPPAAKAA
                     PAKAKAAAAKPAANAAARTAPAKAPAKVAPKAAAKAAPAKAAPAKAPAKSAVKAAAKA
                     PAKAPARASAAAKPPAQEEQAAPSRRKWPTVLG"
     gene            complement(2023..>2362)
                     /locus_tag="VKX24_06880"
     CDS             complement(2023..>2362)
                     /locus_tag="VKX24_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08245.1"
                     /translation="TLILLTSPSRLGGGGVAPLAVVPGLVLLVAFGVPGVRAGQRPAY
                     TWVALFGLYLVIFGLVRNDLFTPSTSALAGWLHHAELAAGMLIAAGGGLLLFLTSPIR
                     RAPQRRPRIA"
BASE COUNT          313 a          906 c          871 g          272 t
ORIGIN      
        1 gaaggccccc gccgatccgg acgacgcggg accgtcggtc cgggagctgt tttgggggaa
       61 aagctaaacc gtttaccgcc cgtctgccga cacattgatg gataatcgga tgttggtccg
      121 ggtttgctcg cgctcgggag cgttcacagc gtccccatca ccgaaggggt gacctgcctt
      181 gtacaaagct tcgctcgggc tcgtcggcgt tgccgccgtc gcgctgatct acggatgggt
      241 tcggcagtcg aacccggcca cctggtttag catcgttgcg gcgattgtcg ccggattgct
      301 gcttgtcgca tcgtggctcc tggagcgggt gcgcggcggg ggcgccgatt tctcgccgtc
      361 cggggcggcc gatgcctccg gcggcggcac ctggaccgct ccggccccgt cgtcgtcagc
      421 ctggtccccg gccggttcgt cctcgccctc ccgccgctcc ccggctgagg agttcacgcc
      481 ggacttcgac tccgccgatg acggtccccg cggagcgtcg gcatcggcct cctcggcgcc
      541 ggcgcagttc gctccgggcc tctacgagcc cgctccgggc ctctacgaac cggaagccac
      601 catggcgatg ccgccggccg aggtcgagga gtcgaagcgc cggttcggcc ggaaggcctc
      661 agcgccgagc gcgccggcga cctctgcggt cgacgagcgg gtggccgagc ttcgggcgct
      721 ctccgagtcg acctcggccg agctgttctc cttcaccgag gaggacgaga gcaccgagtc
      781 ccgccttgcc cgggcgcaac aggaggccga ggacctgctc gcccagccgg tcgagtcgtt
      841 ccgggcgccg gagccggccc gccccgccgc cccgcccccg ccccctccgc cggtggcggc
      901 cccccgggcg ccggagccga tgcggggcgc cccgagccac gagcaggacg aatggctgca
      961 ggccgccatg cgccgccgcg aggcgcgccg ggcggcgacc ggctccggcg acgccgctgg
     1021 gatcgcctcc cgtggaccgg acgctgatga gcccgacgct agcgtcccgt cgagcattgc
     1081 ccccgccggc ggtccggccc cggcctggac tccacccccg ggcgctccgc cgcctgggcg
     1141 ggcggcggca ccgccggccg ccccgccagc tgcccggcct gccgctgcag ctcccgcccc
     1201 aaccgcttca gttgcggctc cacccgcccc ggcaaccgcc ccggcggccc cggctccggc
     1261 ccgccctggc gtcgaagagg agggcgaggc gctcacctgg tcgcagcgcc gccgccgtac
     1321 gcggctgggc gccgagcccg cccccgacta cgagctgcgc gaggtcccct cctcgcccgt
     1381 accgtcgcgg cgccggtccc gggccgagga gccggacgag gaggccgact tcgagctgat
     1441 cccggtcccc ggcgaggagc tgccggagga gcttcccgag gagctggcgg ttgaagaaga
     1501 ggaggaagag gtcgaagagc cccaagaggt tgccgcccgg ccgcccagct ggtcgcgcag
     1561 gaccgccagc agctttgccg gcgaggctcc ggcgtccggg gggcgctcgc cggctccggc
     1621 caaggctgcc ggccgccgcg cccccgcccc gtcagcggcg aaggcggctc cagcgaaggc
     1681 gcctccagcg gcgaaggccg ctccggcgaa ggccaaggcg gcggccgcga agcctgccgc
     1741 gaatgcggct gccaggaccg caccggcgaa ggccccggcg aaggtggccc cgaaggcggc
     1801 ggcgaaggcc gcgccggcga aggcggcccc ggcgaaggca ccggccaagt ccgcggtgaa
     1861 agccgcggcg aaggctccgg cgaaggcccc cgccagggcc agcgcggcag ccaagccgcc
     1921 ggcccaggag gagcaagcgg cgccgtcccg gcggaagtgg ccgaccgtcc tggggtaact
     1981 ggcctgggct gacgggttgt cacgaccgcc cgtgccccgg gctcaggcga tccggggccg
     2041 gcgctgcggg gcgcggcgga tcgggctcgt gaggaacagc agcaagcctc cgccagcggc
     2101 tatcagcatc ccggcggcaa gctcggcgtg gtgcagccac ccggccaggg ccgaggtcga
     2161 cggggtgaac agatcgttgc gcaccaaccc gaagatcacc aggtagaggc cgaatagcgc
     2221 cacccaggtg taggcgggac gctgtcccgc ccgcacgccg gggacgccga atgcgaccag
     2281 cagcaccagt ccgggcacca ccgccagcgg cgccacgccg ccgccgccga gccgtgacgg
     2341 tgaggtcagc aggatcagcg tg
//
LOCUS       DATGJT010000401         4992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_156649, whole genome shotgun sequence.
ACCESSION   DATGJT010000401 DATGJT010000000
VERSION     DATGJT010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156649"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VKX24_06885"
     CDS             complement(<1..627)
                     /locus_tag="VKX24_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015748213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08246.1"
                     /translation="MNAANTQFPSGGGGGGSKPRSGVRLKGLTKSFGAVKAVAGIDLD
                     IAAGETVALLGPNGAGKSTTIEMALGLLPADAGTVEIYGMPPAEAIRVGAIGAMLQTG
                     QLLRDLMVRELLEMMASFYPNPLGVDEVMALTGVADIADRRTEKLSGGQTQRVRAAIA
                     LISRPELLILDEPTVAMDVEGRQAFWRDIRAFAAGGKTVIFATHYLEEA"
     gene            767..961
                     /locus_tag="VKX24_06890"
     CDS             767..961
                     /locus_tag="VKX24_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003911072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08247.1"
                     /translation="MGKHLIDLDEEMLGAARAELGTSTIKDTVNEALRRATLERERRT
                     AAALDLLARVPVDDRDEAWR"
     gene            958..1365
                     /locus_tag="VKX24_06895"
     CDS             958..1365
                     /locus_tag="VKX24_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015291992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain nuclease"
                     /protein_id="HLJ08248.1"
                     /translation="MTHLIDTSAIKRLAQRQVRAVVEPMAVAGNLGRPQICDLEIGYS
                     ARNAEEWDQLLGALDAFGPVETTAAHMRRALQVQRLLAQRSQRGRKIPDLLVAAAAEE
                     LDITVLHYDSDFDLISSVTGQPCAWVVPAGTVD"
     gene            1585..3264
                     /gene="ettA"
                     /locus_tag="VKX24_06900"
     CDS             1585..3264
                     /gene="ettA"
                     /locus_tag="VKX24_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HLJ08249.1"
                     /translation="MGAQFIFTMRGLRRVHPPDKEVLAGINISMFPGAKIGVLGANGA
                     GKSSLLKIMAGEDDGYTGEARLTPGFTVGYLPQEPRLDPGKDVMGNVAEGVAGAKALL
                     DRYNAVCEAMGDPDADFDALLSEQAELNDKIEAAGAWELDRTLEIAMDALNLPPGESP
                     VDTLSGGERRRVALVRLLLQRPDLLLLDEPTNHLDAESVAWLERTLHEYPGTVVAVTH
                     DRYFLDNVAGWILELDRGRGIPWEGNYSSWLDQKQNRLASEEKADARRQRTLARELEW
                     IRLSPRARQAKGKARLNSYEQLLAEAEAAPDRADRLEIAIPPGPRLGELVVELDGISK
                     GYGDRLLIDDLSLSLPRSAIVGVIGANGAGKTTLFRMLTGSETPDAGTVRVGPTVVFA
                     YGDQSREGLDATKTVYQEITGGADTVVVGGRELHGRAYCGAFGFKGTDQQKPVGTLSG
                     GERNRLQLAKVLLAGGNVLLLDEPTNDLDVDTLRALEDALEAFPGCAVVISHDRWFLD
                     RIATHVLAFEGDSQVRWFEGNFSDYEADRHRRLGTDADQPHRLRYKPLVRS"
     gene            3275..4015
                     /locus_tag="VKX24_06905"
     CDS             3275..4015
                     /locus_tag="VKX24_06905"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08250.1"
                     /translation="MSGTLIWISGANGGIGQGLIRTVPWEGARIIGIGRHQAPGTDEH
                     VAADLAEPEHWERAAYSFEKGLSHFEGDRVVFVHAAGTLHPIGFAGEVDSAAYLTNVI
                     VNSASPQALGQLFIQHARQVRAKRHCVIMTSGAARSVYPGWSSYGAAKAAVDQWVRDV
                     GAEQELRGGGVQVLAIGPGTVDTGMQALMRATPEEDFPSRQKFIELFEAGKLVSPDEV
                     GRGIWACLDAGLPNGSVLDLRDRPAPTP"
     gene            complement(4155..>4992)
                     /locus_tag="VKX24_06910"
     CDS             complement(4155..>4992)
                     /locus_tag="VKX24_06910"
                     /inference="COORDINATES: protein motif:HMM:NF014728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HLJ08251.1"
                     /translation="LARKPERVLVDELARGKIGSHRREKRWQDVDTLLAAGIGVDTTL
                     NLGNLESLRSLVARITGSQPAEAVPDAFVRAGTVTLVDLPPAALRRRLAQGLVVPADG
                     VETALSHYFRFANLAALRELAQLWMDESVPDAASAYASLHGAGDRPRGRIVVGLDGSS
                     KDEWLIRYAANVAELNGDALRGIYVHPADGRLHPVLDDARRLLDDLGGTFAEVTADNP
                     ATGLVRAAKRAGASQLVIGSPAGAWLSRLVKGAMARRVLRAAGDLPVQLVCVGDEPPP
                     CP"
BASE COUNT          777 a         1738 c         1791 g          686 t
ORIGIN      
        1 cgcctcctcc aggtagtggg tggcgaagat caccgtcttg ccgccggccg cgaaggcgcg
       61 gatgtcccgc cagaacgcct gccggccctc gacgtccatc gccaccgtcg gctcgtcgag
      121 gatcagcagc tcgggccggg agatcagggc gatcgctgcc cggacccgct gggtctggcc
      181 gccggagagc ttctcggtgc gccggtcggc gatgtcggcg acaccggtca gggccatcac
      241 ctcgtcgacg ccgagcgggt tgggatagaa cgaggccatc atctccagca gctcgcggac
      301 catcaggtcg cgcagcagct gcccggtctg gagcatggcg ccgatcgccc ctacccggat
      361 tgcctcggcg ggtggcatgc cgtagatctc aaccgtcccg gcgtccgccg gcagcaggcc
      421 gagcgccatc tcgatggtgg tggacttgcc ggctccgttc ggccccagca gggcgaccgt
      481 ctcgccggcg gcgatatcga ggtcgatgcc ggccaccgcc ttgacggcgc cgaagctctt
      541 cgtcagcccc ttcagccgga ccccgctgcg gggcttgctc ccgccgcccc cgccgccgga
      601 cgggaactgc gtgttcgcgg cattcacgcg ccgaagttta accacggctg gcagtggcgg
      661 cctcggtgcc gccggttcgg accgtcaggc cgtcccataa ggcgtccacc gagctcccgg
      721 aagaacgacg cgtatatacc gggaggcctt gatatatact caacgcatgg gaaagcacct
      781 gatcgacctc gacgaggaaa tgctcggggc cgcccgagct gagctcggta cgagcaccat
      841 caaggacacc gtaaacgagg cgcttcgaag agcaaccctc gagcgagaac gtcggacggc
      901 ggcggctctt gacttgctcg ccagagtccc agtcgacgat cgggacgaag cttggcgttg
      961 acccacctga tcgacaccag cgcgatcaag cgactcgctc aacggcaagt acgggcggtc
     1021 gtagagccca tggcggtggc ggggaacctt gggcgtcctc agatctgcga cctggagatc
     1081 ggctactcag cccgcaacgc cgaggagtgg gaccaattgc tcggagccct cgatgcattc
     1141 ggccccgtgg aaaccacggc ggcacacatg cgaagagccc tccaggtgca acgcctgctc
     1201 gcgcagcgga gccagcgagg cagaaagatc cccgacctcc tggtggccgc cgccgccgag
     1261 gagctcgata tcacggtgct gcactacgac agcgacttcg acctgatcag ctccgtcacc
     1321 gggcagccct gcgcatgggt cgtgccggca gggacggtcg attgatgtga gcagcatcgg
     1381 ccacaacgca gctgctgcac ctcatcgcta gttcgcgcct gaccaggcca atatgtcgag
     1441 caggcgcaag ggctgccgga ccatcggaca gtgccacggg ccgacggagc gaccttgggg
     1501 ctgaggccga cgctggccgc cggggatggg cgggccagcg ccgtggccgg ccgcccagtg
     1561 tggccggctg gtagcgtggg cggcatggga gcccaattca tcttcaccat gcgcggactg
     1621 cgccgggtgc accccccgga caaggaggtg ctggccggca tcaacatctc gatgttcccc
     1681 ggggccaaga tcggggtgct gggcgccaac ggggcgggca agtcgtccct gctcaagatc
     1741 atggccggtg aggacgacgg ctacaccggc gaggcccggc tcacccccgg cttcaccgtc
     1801 gggtacctgc cccaggagcc ccgcctcgac ccgggcaagg acgtcatggg caatgtggcc
     1861 gagggcgtgg ctggggccaa ggcgctgctc gaccgctaca acgccgtctg cgaggcgatg
     1921 ggggacccgg acgccgattt cgacgcgctg ctctccgagc aggcggagct caacgacaag
     1981 atcgaggcgg cgggggcctg ggaactcgac cggaccctgg agatcgccat ggatgcgctc
     2041 aacctgccgc cgggtgagtc cccggtcgac acgctctccg ggggcgagcg ccgccgggtg
     2101 gcattggtgc ggctgctgct gcagcgacct gacctgctgc tgctcgacga gccgaccaac
     2161 cacctcgacg ccgagtcggt cgcctggctg gagcggacgc tgcacgagta ccccgggacg
     2221 gtggtcgcgg tcacccacga ccgctacttc ctcgacaatg tggccggctg gatcctcgag
     2281 ctcgaccggg gccggggcat cccgtgggag ggcaactact cgtcctggct cgaccagaag
     2341 cagaaccgcc tcgcctccga ggagaaggcc gacgcccgcc ggcagcgcac cctggcccgg
     2401 gagctggagt ggatccggtt gtcaccccgg gcccggcagg ccaagggcaa ggcccggctg
     2461 aacagctacg agcagctgct cgccgaggcc gaggcggccc cggaccgggc cgaccggctg
     2521 gagatcgcca tcccgcccgg cccccggctg ggcgagctgg tcgtggagct cgacgggatc
     2581 tccaagggtt acggcgaccg gctgctgatc gacgacctct cgctcagcct gccccggtcg
     2641 gcgatcgtcg gggtgatcgg tgccaacggc gccggtaaga cgacactgtt ccgcatgctg
     2701 accggctcgg agacacccga tgccgggacg gtccgggtcg ggcccacggt cgtcttcgcc
     2761 tacggcgacc agagccggga aggcctcgac gccaccaaga ccgtgtacca ggagatcacc
     2821 ggcggtgccg acaccgtcgt cgtcgggggc cgcgagctgc acgggcgggc ctactgcggg
     2881 gcgttcggtt tcaaggggac cgaccagcag aagccggtcg gcacgctttc cggcggcgag
     2941 cgcaaccggc tgcagctggc caaggtgctg ctggccggag gcaacgtcct gctgctcgac
     3001 gagccgacca acgacctcga cgtcgacacg ctgcgggcgc tcgaggacgc gctggaggcg
     3061 tttcccggct gcgccgtcgt gatcagccac gaccggtggt tcctcgatcg catcgccacc
     3121 cacgtgctcg ccttcgaggg cgactcgcag gtgcgctggt tcgagggcaa cttctccgac
     3181 tacgaggccg accggcatcg ccggctgggt accgacgccg accagccgca ccggctgcgc
     3241 tacaagccgc tcgtgcggag ttgaggaggg caccgtgagc gggacattga tctggatctc
     3301 cggggcgaac ggcggcatcg ggcagggcct gatccgtacc gttccgtggg agggagcccg
     3361 gatcatcggc atcggccgcc accaggcccc ggggacggac gagcacgtcg ctgccgacct
     3421 ggccgagccg gagcactggg agcgggccgc ctactcgttc gagaaggggc tctcccactt
     3481 cgaaggcgac cgggtggtgt tcgtccacgc cgccgggacc ctgcacccga tcggctttgc
     3541 cggtgaggtc gacagcgccg cctacctcac gaacgtgatc gtcaacagcg cctccccgca
     3601 ggccctgggg cagctgttca tccagcacgc ccgccaggtc cgggccaagc gccactgcgt
     3661 gatcatgacc tccggggcgg cgaggagtgt ctacccgggg tggtcgtcct acggggccgc
     3721 caaggccgcc gtcgaccagt gggtccggga cgtcggcgcc gagcaggagc tgcgcggtgg
     3781 cggggtccag gtgctggcga tcgggccggg caccgtcgac accgggatgc aggcgctgat
     3841 gcgggcgacg cccgaggagg acttccccag ccgccagaag ttcatcgaac tgttcgaggc
     3901 cgggaagctc gtgtcgccgg acgaggtcgg gcgggggatc tgggcctgcc tcgacgccgg
     3961 cctacccaac ggcagcgtcc tcgacctgcg cgaccggccg gccccgaccc cctgagggcc
     4021 gccgcctgag gcccgccccc aaggcccgcc ccctgagggt cacggccccg actcacccgt
     4081 tggtgtggtg gattttcgcc gaaaaacgcg aatattcacc gcgccaacga gtcaggcccc
     4141 gcccgtcgaa gaggtcaggg gcagggcggg ggctcgtcgc cgacgcagac cagctggacc
     4201 ggtaggtcgc cggcggcgcg cagcacccgc cgggccatcg cgcccttgac gaggcgggac
     4261 agccaggccc cggccggcga tccgatcacg agttgcgagg cgcccgcccg cttcgctgcc
     4321 cgcacgaggc cggtcgccgg gttgtcggcg gtcacctcgg cgaacgtccc gccgaggtcg
     4381 tcgagcaggc ggcgtgcgtc gtctaggacc gggtgcaggc gaccgtcggc cgggtgcacg
     4441 tagatccccc tcagggcgtc gccgttcagc tcggcgacgt tggcggcgta gcggatcagc
     4501 cactcgtcct ttgacgagcc atcgagcccg acgacgatcc ggccgcgggg gcgatcccca
     4561 gcgccatgga ggctggcgta cgccgaggcg gcgtcgggga ccgactcgtc catccacagc
     4621 tgggccagct cccgcagtgc ggcgaggttg gcgaagcgaa aatagtggga cagggcggtc
     4681 tcgaccccgt cggccgggac gacgaggccc tgcgccagcc gtcggcgcag cgccgccggg
     4741 ggcaggtcga cgagggtgac cgtaccggcg cgcacgaagg cgtcggggac ggcctcggcc
     4801 ggctgcgatc cggtgatgcg ggcaaccagc gagcggagcg attcgaggtt gccgaggttg
     4861 agcgtcgtgt cgacgccgat gccggcggcg aggagggtgt cgacgtcctg ccaccgcttc
     4921 tcccggcggt gggatccgat cttgccccgg gccagctcgt cgaccagcac ccgttccggc
     4981 ttgcgggcga gg
//
LOCUS       DATGJT010000402         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1502714, whole genome shotgun sequence.
ACCESSION   DATGJT010000402 DATGJT010000000
VERSION     DATGJT010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502714"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..960)
                     /locus_tag="VKX24_06915"
     CDS             complement(25..960)
                     /locus_tag="VKX24_06915"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HLJ08252.1"
                     /translation="MALHLGYVTRETAVSLKRNLLMTLAGILTVAVSLFLFGGVLLLS
                     RMVDHGTARWKNGVELEIFLCSKSTAEPDSPKPACRSEASEGQIAAVRTELEQSPDVR
                     RFRFFSKEDAFNEAKRIFAGDPELLSNIDPDGLPVSFRVAPKKAELTEKVAARFQGRY
                     TDGIDTVLTAKEQVRRLLAGIRWIRGLFFAIAGVLLASSLFLIVNTIRLATFARRREI
                     QVMKLVGATNWFIRVPFMCEGLIQGAIGAGLAFAGVYGLRVILSDLVDRSKNLFSAFY
                     VTGGDAVAIGLLIVAVGATVGAMGSAIGLRRFLDA"
     gene            complement(967..1683)
                     /gene="ftsE"
                     /locus_tag="VKX24_06920"
     CDS             complement(967..1683)
                     /gene="ftsE"
                     /locus_tag="VKX24_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006349025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HLJ08253.1"
                     /translation="MIRFESVTKTYKGGVTAVKDLTVEIAKGEFVFLVGPSGSGKSTC
                     FRLLMKEEVADRGKIWVGDRELSSLSSWKVPYLRRNIGCVFQDFKLLPYKTVYENVAF
                     ALEVIGKPRSVVKQQVPQILDLVGLAKKAGNLPNELSGSEQQRVSIARAFANRPLILL
                     ADEPTGNLDPANSAGIMRLLDRINRTGTTVVMCTHDYGIVDLMRRRVIELNRGVLVRD
                     EAQGAYATGPVPVVGAESQG"
     gene            1875..>2215
                     /locus_tag="VKX24_06925"
     CDS             1875..>2215
                     /locus_tag="VKX24_06925"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HLJ08254.1"
                     /translation="MASAALVALLAGPLAAGRALATQDLGAMTNAERVSRGLRALSTA
                     SDLQSLAQQRANQMAQSGVLAHTVNLSSKVSGWQKIGENVGRGPALSDIETAFMNSPE
                     HRDNILDPAFT"
BASE COUNT          364 a          740 c          783 g          328 t
ORIGIN      
        1 aggaccagct gttgcttaca tcccttacgc gtcgaggaag cgacgcaggc cgatggccga
       61 gcccatggcg ccgacggtgg cgccgacggc gacgatcagc agcccgatgg ccacggcgtc
      121 gccaccggtg acgtagaagg ccgagaagag gttcttcgag cggtcgacca ggtcggagag
      181 gatcacccgg aggccgtaga ccccggcgaa ggccagcccg gcgccgatgg ccccctggat
      241 gagcccttcg cacatgaacg gcacccggat gaaccagttg gtggcgccca cgagcttcat
      301 gacctggatc tcccggcggc gggcgaaggt ggccagccgg atggtgttga cgatgaggaa
      361 cagcgacgag gccagcagca cgccggcgat ggcgaagaac agcccccgga tccagcggat
      421 gccggccagc agccggcgga cctgctcctt ggccgtgagg acggtgtcga tgccgtcggt
      481 gtaacggccc tggaagcggg cggccacctt ctcggtcagc tcggccttct tcggcgccac
      541 ccggaaggag acggggagcc cgtccgggtc gatgttcgac agcagctcgg ggtcgccggc
      601 gaagatccgc ttggcctcgt tgaaggcgtc ctctttggag aagaaccgga agcgccggac
      661 gtcgggcgac tgctcgagct ccgtgcggac ggcggcgatc tgcccctcgc tggcctccga
      721 ccggcaggcg ggcttggggg aatcgggttc ggccgtcgac ttcgagcaga ggaagatctc
      781 gagctcgacg ccgttcttcc accgggccgt gccgtggtcc accatgcggg acagcaggag
      841 cacgccgccg aagaggaaca gcgacacggc cacggtgagg atgccggcca gcgtcatgag
      901 caggttgcgc ttgagcgaga cggccgtctc gcgcgtgacg tacccgaggt gcagcgccat
      961 cggctcctac ccctggctct cggcgcccac gacggggacg ggcccggtgg cgtaggcgcc
     1021 ctgggcctcg tcccgcacga ggacgccccg gttgagctcg atcacccgcc ggcgcatcag
     1081 gtcgacgatg ccgtagtcgt gggtgcacat gacgacggtg gtgcccgtcc ggttgatgcg
     1141 gtcgaggagc cgcatgatgc cggccgagtt ggccggatcg aggttcccgg tcggctcgtc
     1201 ggccaggagg atgaggggcc ggttggcgaa ggcccgggcg atcgagaccc gctgctgctc
     1261 gctgcccgag agctcgttgg ggaggttgcc ggccttcttg gccagaccga cgaggtcgag
     1321 gatctgcggc acctgctgct tgacgaccga gcggggcttg ccgatcacct cgagggcgaa
     1381 ggcgacgttc tcgtagaccg tcttgtaggg caggagcttg aagtcctgga agacgcagcc
     1441 gatgttgcgc cgcaggtagg gcaccttcca cgacgacagc gacgacagct cccggtcccc
     1501 gacccagatc ttgccccggt cggccacctc ctccttcatg aggaggcgga agcaggtcga
     1561 cttgccggat cccgaggggc cgaccaggaa gacgaactcg cctttggcga tctcgacggt
     1621 gagatccttc accgccgtca cgccgccctt gtaggtcttc gtgaccgatt cgaaccggat
     1681 catgactcgg gcgagggtac caacctccgg cggcgcgaca ggggcatctg cgctccgatg
     1741 accccaatct cacggcccgg ggggatggat cagccgcggc gccacggttc gtggcaggac
     1801 ccgccatgca ccccatcgaa agagctagac cacaccggtt ccgtggggag tgtgcgttgc
     1861 tcagacgttt cgccttggcc tctgccgccc tggtcgcgct gttggccggc ccgctggcgg
     1921 ccggacgcgc cctcgcgacg caggacctgg gggcgatgac caacgccgag cgggtctccc
     1981 ggggcctgag ggcgctctcc accgcctccg acctgcagtc gctggcccag cagcgcgcca
     2041 accagatggc ccagagcggc gtgctggccc acaccgtcaa cctcagctcc aaagtctccg
     2101 gctggcagaa gatcggggag aacgtcggcc ggggcccggc gctgtccgac atcgagacgg
     2161 cgttcatgaa ctcgccggag caccgggaca acattctcga tcccgccttc accca
//
LOCUS       DATGJT010000403         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_53124, whole genome shotgun sequence.
ACCESSION   DATGJT010000403 DATGJT010000000
VERSION     DATGJT010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53124"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="VKX24_06930"
     CDS             <1..561
                     /locus_tag="VKX24_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08255.1"
                     /translation="SDGRRRGMNVTVAPQAFSLVDFDAGRIAALAAEVAALVGVPDDV
                     TVEVDVDERSPFGKTSAVVTGRSVRLLVEGGALEDPQRLRQFSEPGARLALGRLLYRV
                     ADRFDPAFGDPPADADLTMAEHAAWDAYSLGRYARRAGVDGGEGRRRYAFRIRHGFTD
                     AADQAFDRLWQGSGLTWSDIQRVCAL"
     gene            complement(558..893)
                     /locus_tag="VKX24_06935"
     CDS             complement(558..893)
                     /locus_tag="VKX24_06935"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HLJ08256.1"
                     /translation="MTEPSNTADLSLAVVAGVFDARPGSESALGAVLAHYVVVSRTSP
                     GCRNIDLVASLTRPGRFLVYEKWESADHQQAHLTSPVTEEMAAAALPLLAAPPDLGLF
                     EAISAHDLI"
     gene            1224..2159
                     /locus_tag="VKX24_06940"
     CDS             1224..2159
                     /locus_tag="VKX24_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ08257.1"
                     /translation="MAKERVERDEEDLVRLYLTDIGQYPLLTKDDEVRLAQAIEGGNA
                     ARCELEKAASISASKKRELRRSVTEGEQAQRTFVQSNLRLVVSIAKKYQASGLPLLDL
                     IQEGNLGLMHAVEKFDWRKGFKFSTYATWWIRQAITRGIANTGRTIRLPVHAGDTLAR
                     LQKARARLELKLGRPATLSELAVEVDMPEDKVTEALRFAAEPLSLSEPLREDGDAELG
                     DIVEDRSAESPFEVAATALLPAEIEKLLAPLDERERQILALRFGLDRGEPRTLEEVGE
                     YFNLTRERIRQIEARAMSKLRHPSSDTGARDLLAV"
BASE COUNT          398 a          864 c          886 g          373 t
ORIGIN      
        1 tctgatggtc gccgccgcgg catgaacgtc acggtcgcgc cccaggcctt ctccctcgtg
       61 gacttcgacg ccgggcggat cgcggcgctg gccgccgagg tcgccgccct ggtcggcgtg
      121 ccggacgacg tcaccgtcga ggtcgacgtc gacgagcgga gcccgttcgg gaagacgtcg
      181 gcggtggtga ccggccgctc ggtgcggctc ctggtcgagg gcggcgcgct ggaggatccg
      241 cagcggctgc ggcagttctc cgagcccggc gcccgcctgg ccctcgggcg gctgctgtac
      301 cgggtggccg accggttcga cccggcgttc ggcgacccgc cggccgacgc cgatctcacg
      361 atggccgagc acgccgcctg ggacgcctac agcctcggcc gctacgcccg ccgcgccggc
      421 gtcgacggcg gcgagggccg gcggcgctac gccttccgga tccgccacgg tttcaccgac
      481 gccgccgacc aggcgttcga tcggctgtgg cagggatcgg gcctgacctg gtccgacatc
      541 cagcgcgtct gcgccctcta gatcaggtcg tgggcgctga tcgcctcgaa caacccgaga
      601 tcgggcgggg cggccaggag cggaagggcg gcggcggcca tctcctcggt caccggcgag
      661 gtgaggtgcg cctgctggtg gtcggcgctt tcccatttct cgtagacgag gaagcggccc
      721 ggccgggtca gcgaggccac gaggtcgatg ttgcggcatc cggggctcgt ccggctgacg
      781 acgacgtagt gggcgaggac ggctccgagg gccgactcgg aaccggggcg ggcgtcgaaa
      841 acgccggcga cgaccgccag cgacagatcg gcggtgtttg acggttcggt catcgcgcgg
      901 tgcgggtatt gacgctcacg atgggcgcga aacggcagct gacatcgttc tgtaatggcg
      961 ataaccgcgc tcggagggag gagatgtccg gattgtgccg aaatccggag cagatcaaca
     1021 gcaccgtcgc cggttcggcc gggtcctgtt cccgggggag acggggcgtc ggccctgcgg
     1081 ctgtgagaga tctgagacga attcggcgga ttgatccggg agtcttgacc ggcccggtat
     1141 cgttaacgac aaggtggtgt tggatgctgg gtggcgatgc caagcccacg cgcgctccac
     1201 gcgaaacccg gaaaaggaac tccgtggcca aggaacgagt tgagcgggac gaggaggatc
     1261 tcgtccggct ctacctcacc gacatcggac agtatcccct gctcacgaag gatgacgagg
     1321 ttcgcctcgc ccaggcgatc gaaggcggca acgccgcccg gtgcgaactg gagaaggcag
     1381 ccagcatctc cgcgagcaag aagcgtgagc tccgccgctc ggtcaccgaa ggcgaacagg
     1441 cccagcgcac gttcgtgcag tcgaacctgc ggctggtggt ctccatcgcc aagaagtacc
     1501 aggcgtccgg tctcccgctg ctcgacctga tccaggaggg caacctcggc ctgatgcacg
     1561 cggtcgagaa gttcgactgg cgcaagggct tcaagttctc cacgtacgcc acgtggtgga
     1621 tccggcaggc gatcacccgc ggcatcgcca atacgggccg cacgatccgc cttcccgtcc
     1681 acgccggcga cacgctggcc cggctccaga aggcccgggc ccgcctcgag ctcaagctcg
     1741 ggcggccggc gacgctgtcg gagctggccg tcgaggtcga catgccggag gacaaggtca
     1801 ccgaggcgct gcggttcgcc gccgagccgc tctcgctgtc cgagcccctc cgggaggacg
     1861 gcgacgccga actcggcgac atcgtcgagg accgctccgc cgagtcgccc ttcgaggtgg
     1921 cggccacggc gctgctgccg gccgagatcg agaagctgct ggccccgctc gacgaacggg
     1981 agcgccagat cctggccctc cgcttcggtc tcgaccgcgg cgagccccgc acgctggaag
     2041 aggttggcga gtacttcaac ctcacccggg agcggatccg ccagatcgag gcccgggcga
     2101 tgtcgaagct ccgtcacccg tcctccgaca ccggcgccag ggacctcctc gccgtctgag
     2161 tcgacgacaa tcctgcgaac tggccgccta cgggcggcct cttcgcgtca cgggtactcg
     2221 aaggtgtccg ccggacacgg ccgtgacctt ccccaacctg ccacttgccg ttcccggact
     2281 gtccgcccct ctcctgctag agggcctatc gccggcaatc cccgatcggc ctcacaaccg
     2341 gcgttcctga ggaacgacag atgttcctca ggaacgccga atcggtcggc tgccgggcgg
     2401 acgggcaacc ggcgtacgtc aggaacgaca ggtgttcctt aggaacgccg gtccacccaa
     2461 tcgctccgaa gtcgtggtgg ccgtctgcgg gcagatcctg gtggccgctg acaaccaaaa
     2521 g
//
LOCUS       DATGJT010000404         3148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1190577, whole genome shotgun sequence.
ACCESSION   DATGJT010000404 DATGJT010000000
VERSION     DATGJT010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3148
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190577"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VKX24_06945"
     CDS             complement(<1..184)
                     /locus_tag="VKX24_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010595963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ08258.1"
                     /translation="MTKVKALSARTFSSLHNRNFRLYMIGQAISLSGTWMQTVAQAWL
                     VLKLTDSGTALGLVTAL"
     gene            406..2385
                     /locus_tag="VKX24_06950"
     CDS             406..2385
                     /locus_tag="VKX24_06950"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ08259.1"
                     /translation="MNWALLLATALLTAAVVSVPPVREVVKRTSLRVWSARPRGGLLP
                     DDVWARRHARIVAVLWAHVPAIVLFAAVTGRGWLHGAIESTPVVLTALLARSPSACRA
                     ARAAMATLGLVTTSAILVHLSGGLTEMHFHFFVVIGIITLYQDWLPFLLALGFVILHH
                     GVMGAIDPRSVYDHADAYAHPWKWAMIHGGFVLAASMVYLSAWRLNEEVFLHDPLTNL
                     ANRRLFEERLSHAVLRGARDTRPIMVLFLDVDDFKTVNDSLGHAAGDQLLITVAERLT
                     QCVRAADTVCRLGGDEFAVLLEGADPEYANALAERLLGVLHAPMILHGKEVSVTASIG
                     IAGNFADQDADGMLRDADAAMYAAKRNGKAHYSFFEPTMHESLSQRVEMHAELQRAVK
                     EGEFLVYYQPTLELATSKLTGVEALVRWDHPTRGVVPPGEFIPLAEETGLIVPIGRWV
                     LAESCRQVHVWNQLVPAAEALTLHVNMSARQLQAATLTEDVAAILGESGFEPRNLVLE
                     ITEGVLVHDPEAAIAKLNEIKRLGVRLAIDDFGTGYSSLSYLQRFPIDILKIDKSFVD
                     HVTDGGTASALARAIVKLGPTLGLEVVAEGIETAEQAEELRALQCDQGQGYYFSHPLP
                     AEDLGSVLAAWTASMEADRLAISAGPLVGEYAETP"
     gene            2490..2795
                     /locus_tag="VKX24_06955"
     CDS             2490..2795
                     /locus_tag="VKX24_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08260.1"
                     /translation="MSDRRNRSDRRYRTGSPGRRRGRRTGLLDFWQNIMDDTYDFFDD
                     TIDRVRDDDYDDLEDDVDELREAVAALNAKLDRLLAQDKPSNLDVRETPKPVAKTTA"
     gene            complement(2872..>3148)
                     /locus_tag="VKX24_06960"
     CDS             complement(2872..>3148)
                     /locus_tag="VKX24_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08261.1"
                     /translation="FLVDALRSTEVITRYLEGQMAAGRLRRMDPVLAMQAFLAPLMFH
                     MVSRPLVDEYGLTAVPVDEAMREFTDAWLRAMAPTAVGGRAARRPLR"
BASE COUNT          492 a         1145 c         1038 g          473 t
ORIGIN      
        1 ggagggcggt caccagcccg agggcggtgc ccgagtcggt gagcttgagg acgagccagg
       61 cctgggcgac cgtctgcatc cacgtccccg acagggagat cgcctggccg atcatgtaca
      121 gccggaagtt gcggttgtgc agggacgaga acgtgcgggc ggacagcgcc ttcaccttcg
      181 tcatcccgtc ccgtctccgc tccgccgcgc cgcgactccg tccgccgata gttagtttgt
      241 ctaacggttc gcgggctcat tcattcccgg agcggcggac gggcacacct ggcgacgccg
      301 caacccaact cccggacaat tctctggggc cagggtcaat ccggtcccac tgcaggccga
      361 ggcgacttcg gagacgatcc gtgctccgga aaggaccgct gggtgttgaa ctgggcgtta
      421 ctcctggcca ccgcgctgct gacggctgcc gtggtgagcg tgccgccggt gcgggaggtc
      481 gtgaaacgga cgtcgctgcg ggtgtggtcg gcgcggcccc ggggcggact cctgcccgac
      541 gacgtgtggg cccgtcgtca cgcccggatc gtggccgtcc tgtgggcgca cgtcccggcc
      601 atcgtgctct tcgccgccgt gaccggtcgc ggctggctgc acggggcgat cgagagcacg
      661 ccggtggtct tgaccgcgct gctggcccgg tcgccgtcgg cgtgccgggc ggcccgggcc
      721 gccatggcga ccctgggcct cgtcaccacc tcggcgatcc tcgtccacct ctccggcggg
      781 ctgaccgaga tgcacttcca cttcttcgtc gtgatcggga tcatcaccct ctaccaggac
      841 tggctgccct tcctcctggc cctcgggttc gtcatcctgc accacggtgt gatgggggcg
      901 atcgaccccc gcagcgtcta cgaccacgcc gacgcctacg cccacccctg gaaatgggcc
      961 atgatccacg gcgggttcgt cctcgccgcc agcatggtct acctcagcgc ctggcggctg
     1021 aacgaggagg tcttcctcca cgacccgctg accaatctgg ccaaccgccg gctgttcgag
     1081 gagcgcctct cgcacgccgt cctccggggc gcccgcgaca cccggccgat catggtgctg
     1141 ttcctggatg tcgacgattt caagaccgtc aacgacagcc tcggccacgc cgccggcgac
     1201 cagctcctca tcaccgtggc cgaacggctc acgcagtgcg tgcgggccgc cgacacggtg
     1261 tgccgcctcg gcggggacga attcgccgtc ctgctcgaag gggccgatcc cgagtacgcc
     1321 aacgcgctgg ccgagcggct gctcggcgtc ctgcacgccc cgatgatcct ccacggcaag
     1381 gaggtctcgg tgacggccag catcggtatc gccggcaact tcgccgacca ggacgccgac
     1441 ggcatgctgc gcgacgccga tgccgccatg tacgccgcca agcgcaacgg caaggcgcac
     1501 tactccttct tcgagccgac gatgcacgag tcgctcagcc agcgggtcga gatgcacgcc
     1561 gagctgcagc gagcggtcaa ggagggcgag ttcctcgtct actaccagcc gaccctggaa
     1621 ctcgccacct ccaagctgac gggggtggag gccctggtgc gctgggacca cccgacccga
     1681 ggtgtcgtcc cgccgggcga gttcatcccg ctggccgagg agaccgggct gatcgtgccc
     1741 atcggccggt gggtcctggc cgaatcctgt cgtcaggtcc acgtctggaa ccagttggtc
     1801 cccgccgccg aggcgctgac gctgcacgtc aacatgtcgg cccgtcagct ccaggcggcc
     1861 acactcaccg aagacgtcgc cgccatcctc ggcgagtccg gtttcgagcc ccggaatctc
     1921 gtcctcgaga tcaccgaagg cgtcctcgtc catgaccccg aggccgccat cgccaagctg
     1981 aacgagatca agcggctcgg cgtgcggctg gccatcgacg acttcgggac ggggtactcc
     2041 tcgctcagct atttgcagcg cttcccgatc gacatcctga agatcgacaa gtcgttcgtc
     2101 gaccacgtca ccgacggcgg caccgcctcg gcgctggccc gggccatcgt caagctgggc
     2161 ccgacgctcg ggctggaggt cgtcgccgaa ggcatcgaga ccgccgagca ggccgaggag
     2221 ctccgggccc tgcaatgcga ccagggccag ggctactact tctcccatcc cctcccggcc
     2281 gaggatctgg gctccgtgtt ggcggcgtgg accgcatcga tggaggcgga ccggctggcg
     2341 atcagcgccg ggccgctggt cggcgagtac gccgagacgc cgtagcgccc cggtggggtt
     2401 tttgacagcc cggcgagttc agcatacgtt gaaagacgct cgatctcgtc ctttccaggt
     2461 tgtgtaagcc cccaccgaag gagcgacgga tgtccgaccg cagaaaccgc agcgaccgcc
     2521 gttaccgcac cgggagcccg ggacgccggc gcggccgccg caccggcctg ctcgacttct
     2581 ggcagaacat catggacgac acctacgact tcttcgacga cacgatcgac cgcgtccggg
     2641 acgacgacta cgacgacctc gaggacgacg tcgacgagct ccgggaagcc gtggccgcac
     2701 tcaacgccaa gctcgaccgc ctgctggccc aagacaagcc ctccaacctc gacgtccggg
     2761 aaacccccaa gcccgtggcc aagaccacgg cctgaccccc aaagggtcgg gcggccctcg
     2821 tcccgacgaa ccgtagggcg ggcggcccgg cgcccgcgca gccgtggtgt atcagcgaag
     2881 cggccgccgg gccgcccgcc cccccaccgc cgtcggcgcc atcgcccgca accacgcatc
     2941 ggtgaactcc cgcatcgcct cgtcgacggg tacggccgtg agcccgtact cgtcgacgag
     3001 cggacgggac accatgtgga acatgagcgg ggccaggaag gcctgcatgg cgaggacggg
     3061 atccatgcgc cggagccggc cggcggccat ctgcccttcg aggtagcggg tgatgacctc
     3121 cgtgctccgg agagcgtcga ccaggaag
//
LOCUS       DATGJT010000405         2786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_157020, whole genome shotgun sequence.
ACCESSION   DATGJT010000405 DATGJT010000000
VERSION     DATGJT010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157020"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1212
                     /locus_tag="VKX24_06965"
     CDS             <1..1212
                     /locus_tag="VKX24_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08262.1"
                     /translation="ASPIAQAAVDSTSGSAALASVAYPGDLVVTAPGLLAGVSGGQLS
                     GIPPYPLIATAGSTTTPEQRVDVPGAAMRAAATARRAEATARSGAAPAAEGAPAPAWA
                     TSSTVEADDAGAVTSTAVSEVTGVTVGPVTLGRVTARSVVRRAPGGDPVRQTAFEATG
                     VTVGGTAVALTPAGLVVAGTATPVSASALQPVLEAAGVSVRPLAAENTTDGVISAGLV
                     VTRTQSLPTAISPVTVTYTFGRAAAGVSAAPLPPPAPADAVAPGPAPASPAVGATDES
                     AAGASSGPAETPTPATVWAGSPVAGAAFGGSGATIGTGGPVGAGAAAGGADATGTGDD
                     RSAAGAGSGGAAAPSPAAVAAVPVRNVGSRLFDLSAIYLLLVAAAATAAAVIQLVRGA
                     GVRLPWTSRPG"
     gene            1191..1535
                     /locus_tag="VKX24_06970"
     CDS             1191..1535
                     /locus_tag="VKX24_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019873729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08263.1"
                     /translation="MDLKTWLRAQWDRVLGAGAVAAGVVAILLGYHGVSHTPFPAEEI
                     PYVISGAVAGIALIGIGLTSWLSADLRDEWRKLDRIERLLEGSEAPPVDDRPPPAENG
                     AANHPVAPGTRR"
     gene            1532..1954
                     /locus_tag="VKX24_06975"
     CDS             1532..1954
                     /locus_tag="VKX24_06975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08264.1"
                     /translation="MTADPDWPRRGRWWLAAGQTACLATIVLAGRASAHHAAAGGQGR
                     WVAIAITAALLSAAGNGVWLAVLRRAAALRRRTVVDRIGERAGRAGSPPRPTDDSAGR
                     WVTVPGLTRRHRPDCALVAGRAVVPAPADTRPCGWCES"
     gene            1942..>2786
                     /locus_tag="VKX24_06980"
     CDS             1942..>2786
                     /locus_tag="VKX24_06980"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ08265.1"
                     /translation="MRIVKDLLPFVVVGVAAGSVYGLAGLGLTLTYTTTGIFNFAHGA
                     LAAAAAFAFFTVHVQWGWPWPVALALAVAGVGIVGGVLMERLSRSLRTADAATAAVAT
                     VGLLLAVQGGIEWRYGSAARQLAPFLSGTALHLGGVAVTRQQAATVLVGAAASVAVLV
                     FLRRSRLGVQMRAVVGNPDLLALAGTDPSPVRTAAWVIGSGFAALSGVLIAPFLGLDA
                     GLLTLLVVQAFGAVAIGRFRSLPLTYAGGLALGVAASLLTKEFAGRPSLGGLPSSLPF
                     LVLVVA"
BASE COUNT          256 a         1104 c         1064 g          362 t
ORIGIN      
        1 gccagcccga tcgcccaggc ggcggtcgac tcgaccagcg gctccgcggc actggcctcg
       61 gtggcctacc ccggcgacct ggtcgtcacc gcccccgggc tgctggccgg cgtctccggc
      121 gggcagctga gcggcattcc cccctacccg ctgatcgcca ccgccgggtc gacgacgacg
      181 ccggaacagc gcgtcgacgt ccccggcgcc gccatgcggg cggcggccac ggcccgccgg
      241 gcggaggcga cggcccgcag cggagccgca ccggcggcgg agggagcacc ggcgccggcc
      301 tgggcgacct cgtcgacggt cgaggccgac gacgccggcg ccgtcacgtc cacggccgtc
      361 tccgaggtca ccggcgtgac cgtcggcccg gtgacgctcg ggcgcgtcac cgcccgcagc
      421 gtggtgcgcc gggcccccgg cggcgatccc gtccgccaga cggcgttcga ggcgaccggc
      481 gtgaccgtcg gaggcaccgc ggtggccctc acgccggccg ggctggtggt ggcgggcacg
      541 gcgacgccgg tctcggcgtc ggcgctgcag ccggtgctgg aggcggccgg cgtctccgtc
      601 cggcccctgg cggccgagaa tacgaccgac ggggtgatct ccgccgggct cgtcgtcacc
      661 cgcacccagt cgcttccgac ggcgatctcg ccggtcaccg tgacctacac gttcggccgg
      721 gcggcggcgg gggtatcggc cgctccgctg ccgccgcccg ctccggccga cgccgttgcg
      781 ccgggcccgg cgcccgcctc gccggccgtc ggcgccaccg acgaaagcgc cgccggcgcg
      841 tcgagcggcc cggccgagac cccaacgccg gcaacggttt gggccggctc gccggtggcg
      901 ggcgccgcct tcggcgggtc aggcgcgacg atcggcaccg gcgggccggt gggtgccggt
      961 gcagcagccg gcggggccga cgccaccggc accggagatg accggagcgc cgccggggca
     1021 gggtccgggg gggccgccgc gccgtcaccg gcggccgtgg cggcggtgcc ggtgcgcaac
     1081 gtcgggtccc ggctcttcga cctgtcggcg atctatctgc tgctggtggc ggcggcggcc
     1141 acggccgccg ccgtcatcca actcgtgcga ggagcggggg tgcggctgcc gtggacctca
     1201 agacctggct gagagcgcag tgggaccggg tcctcggtgc cggcgccgtc gcggccggcg
     1261 ttgtcgccat cctcctcggc tatcacgggg tctcccacac gccgttcccg gccgaagaga
     1321 tcccctacgt gatctccggc gccgtggccg gcatcgccct catcggcatc gggctgacgt
     1381 cgtggctgtc ggccgacctg cgcgacgaat ggcgcaagct cgaccggatc gagcgcctgc
     1441 tcgaggggtc cgaggcaccg ccggtcgacg accgcccacc tccggccgag aacggcgcgg
     1501 cgaaccatcc ggtcgccccc gggacgcggc ggtgacggcg gaccccgact ggccccgccg
     1561 ggggcggtgg tggctggccg ccggccagac cgcctgcctg gccacgatcg tgctcgccgg
     1621 acgggccagt gcccatcacg ccgcggccgg ggggcagggc cggtgggtgg cgatcgccat
     1681 caccgccgcc ctcctcagcg cggccggtaa cggggtctgg ctggcggtgc tgcgccgggc
     1741 ggccgccctg cgccgccgta ccgtggtgga ccgcatcggc gagcgggccg gccgggccgg
     1801 ctccccgccg cggccgaccg acgactccgc cggccggtgg gtcacggtcc cgggcctcac
     1861 gcgccgccac cggccggact gcgcgctcgt cgccggccga gccgtcgtcc ccgcccccgc
     1921 cgacacccgg ccctgcggct ggtgcgaatc gtgaaggatc tcctgccgtt cgtcgtcgtc
     1981 ggtgtggcgg cgggttccgt ctacggcctg gccggcctcg gcctcacgct cacgtacacc
     2041 accaccggga tcttcaactt cgcccacggg gcgctggccg ccgcggcggc cttcgccttc
     2101 ttcaccgttc acgtccagtg gggatggccg tggccggtgg cgctggccct cgccgtggcc
     2161 ggtgtcggca tcgtcggcgg cgtgctcatg gagcggctgt cccggtcgct gcgcaccgcc
     2221 gacgccgcca cggcggcggt cgccacggtg gggctcctcc tcgccgtcca gggcggcatc
     2281 gaatggcgct acggcagcgc cgcccgccag ctggcgccgt tcctgtcggg caccgcgctc
     2341 cacctcggcg gggtggcggt gacccgccag caggcggcca ccgtgctggt cggggcggcg
     2401 gccagcgtcg ccgtcctcgt cttcctgcgc cgctcccggc tcggcgtcca gatgcgggcc
     2461 gtcgtcggca atcccgacct gctggcgctg gccggcaccg acccctcccc ggtccgcacc
     2521 gccgcctggg tgatcgggtc gggcttcgcc gccctgagcg gcgtgctgat cgcgccgttc
     2581 ctcgggctcg acgccgggct cctcacgctg ctggtggtgc aggctttcgg cgccgtggcc
     2641 atcggccggt tccgcagcct gccgctgacc tacgccgggg gcctggcgct gggcgtggcc
     2701 gcctcgctgc tgaccaagga gttcgccgga cggccgtcgc tcggcggcct gccgtcgtcg
     2761 ctgcccttcc tcgtgctggt ggtggc
//
LOCUS       DATGJT010000406         2630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1401439, whole genome shotgun sequence.
ACCESSION   DATGJT010000406 DATGJT010000000
VERSION     DATGJT010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1401439"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..480)
                     /gene="ndk"
                     /locus_tag="VKX24_06985"
     CDS             complement(64..480)
                     /gene="ndk"
                     /locus_tag="VKX24_06985"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010878270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HLJ08266.1"
                     /translation="MERTLMFVKPDGVRRGLVGEIIGRVERKGLRLVGLKLFQPDTVL
                     AGGLYAEHEGKPFYDALVAFVTSGPIVAMCLEGPEAHRQVRNLMGATNPTEAAPGTIR
                     GDFGLVIDANVVHGSDSATSAARELALFFPELPPAG"
     gene            complement(583..1848)
                     /locus_tag="VKX24_06990"
     CDS             complement(583..1848)
                     /locus_tag="VKX24_06990"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HLJ08267.1"
                     /translation="MARIEALADLLDHPERTYPTVQIAGTNGKTTTARMVGAILAAHG
                     LTTGVYTSPHLQSIRERFSIGGDDEGEVRIDLIDPDELAALVEYLLPYVDLVQGRLGE
                     DVTYFELTTAMAFEWFANRSVAAGVYEAGLGGAWDATNIVPGDVSVLTRIAVDHIAFL
                     GATPLENAREKVGIVKPGARCISAAQDPDVARLVEETAERQGALLAVEGRDFRLVRDD
                     AGLGGRVITVEGPQGGRYEDLFVPLFGSHMALNATLAIAAAEELLGRALDYDATAAGL
                     RAVSSPGRLEIVGREPLVVIDGAHNPQAAQALGPALVQSFGGAPKSFVLSIFADKDID
                     GILTALRPFAARVVFWQASSPRAAPAAALREAAERAGFDPATMATASSLEEAVGAARS
                     AAGPDGMVVVTGSLHGVGEARDLLVGPVD"
     gene            complement(1941..>2630)
                     /locus_tag="VKX24_06995"
     CDS             complement(1941..>2630)
                     /locus_tag="VKX24_06995"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HLJ08268.1"
                     /translation="EVAKLALRQPGSAGEAAARQVLRFVLDTVLRLLHPFMPFITEEI
                     WQRLHAGEGGEPSIMRAPWPAPLAGFADPGAEHDLALVRDVVSAIRSFRADHHIESGA
                     RMRVALTGADARALEALDRERAVVEALGRVQIETAEAPGGGPETRVVAGAVDILIRLG
                     DILDLDAERARLGKALERAEAEVTRFETKLGNESFRAKAPAEVVAAEERKLAEAHATQ
                     AKLRAQLEELA"
BASE COUNT          356 a          957 c          967 g          350 t
ORIGIN      
        1 accctacgac attcggggaa aacccgcgtt tggggaggac ttttcgcgac ctggcgggga
       61 accctagccg gcgggcggga gttcggggaa gaacagggcc agctcgcggg cggcggaggt
      121 agccgagtcg gacccatgga ccacgttggc gtcgatcacc aggccgaagt cgccgcggat
      181 cgtgcccggg gccgcctcgg tggggttcgt ggctcccatc aggttgcgca cctgccggtg
      241 agcctccggg ccctcgaggc acatcgccac gatcgggccc gaggtcacga aggcgaccag
      301 ggcgtcgtag aacggcttgc cctcgtgctc ggcgtacagg ccgccggcca ggacggtgtc
      361 cggctggaac agcttcagcc cgaccagccg caggcccttg cgctcgaccc ggccgatgat
      421 ctcgccgacc aggccgcggc gcacgccgtc gggcttcaca aacatcaggg tccgttccat
      481 cggcggcgat gatagtcgac gcgggccggc tgcccggcgc ggcggggttc ggacccgccg
      541 aagcgccggc tcggcaccgc cccgcgtcgg caggcctcgg ggtcagtcga ccgggccgac
      601 cagcaggtcc cgggcctcgc cgaccccgtg cagcgagccg gtgacgacga ccatgccatc
      661 gggcccggcg gccgaccggg cagcgccgac cgcctcctcc agcgaggacg ccgtagccat
      721 ggttgccggg tcgaagccgg cccgctcggc ggcctcccgg agggcggcgg ccggggccgc
      781 cctggggctg gaagcctgcc agaacaccac ccgggcggcg aacgggcgga gggcggtcag
      841 gatgccgtcg atgtccttgt cggcaaagat cgagagcacg aaggacttgg gggcgccgcc
      901 gaagctctgc accagcgccg ggcccagcgc ctgggccgcc tgcgggttgt gcgccccgtc
      961 gatcaccacc agcggctccc ggccgacgat ctcgagccga cccggcgagc tgaccgcccg
     1021 gaggcccgcc gccgtggcgt cgtagtccag ggcacggcca agcaactcct cggccgcagc
     1081 gattgccagg gtggcgttga gcgccatgtg ggacccgaac agcgggacga acaggtcctc
     1141 gtagcgtccg ccctgcggac cctcgacggt gatcaccctg cccccgaggc cggcgtcgtc
     1201 ccggaccagg cggaagtccc ggccctcgac cgccagcaag gctccctgcc gctcggcggt
     1261 ctcctcgacc aggcgggcga catccgggtc ctgggcggcg gagatgcagc gggcgccggg
     1321 cttgacgatg ccgaccttct cccgggcgtt ctccagcggg gtcgccccaa ggaaggcgat
     1381 gtgatcgacg gcgatccggg tgagcaccga cacgtcgccc gggacgatgt tggtggcgtc
     1441 ccaggcgccg ccgagaccgg cctcgtagac tccggcagcg acgctgcggt tggcgaacca
     1501 ctcgaaagcc atcgccgtgg tcagctcgaa gtaggtgacg tcctcaccga gccggccctg
     1561 gaccaggtcg acgtagggca gcaggtactc gaccagggcc gccagctcgt cgggatcgat
     1621 caggtcgatg cgcacctcgc cctcgtcgtc gccgccgatc gagaatcgct cccggatcga
     1681 ctgcagatgg ggggaggtgt agaccccggt cgtcaggccg tgggccgcca ggatggcgcc
     1741 gaccatgcgg gcggtcgtcg tcttgccgtt ggtgccggcg atctgcacgg tcgggtacgt
     1801 ccgctctggg tggtcgagca ggtcggccag cgcctcgatc cgggccaccc ccggccggat
     1861 cccctggccc cgcgcatcga tggcggcgac cgcctcccgg taggacagcg gcgcggtggg
     1921 gatgccgggg aggtcggtgg ctatgccagc tcctcgagct gtgcccgcag cttcgcctgg
     1981 gtggcgtggg cctcggcgag cttccgctcc tcggcggcga cgacctcggc cggggccttg
     2041 gcccggaacg actcgttgcc cagcttggtc tcgaaccggg tcacctcggc ctcggcccgc
     2101 tcgagcgcct tgcccaggcg agcccgctcg gcgtcgaggt cgaggatgtc gcccagccgg
     2161 atgaggatgt cgactgcgcc ggccaccacc cgggtctccg ggcctccgcc gggagcctcg
     2221 gcggtttcga tctggacccg gccgagggct tcgacgaccg cccgctcccg gtcgagcgcc
     2281 tccagcgccc gggcgtctgc tccggtgagc gccacccgca tcctggcccc ggattcgatg
     2341 tggtggtccg cccggaagct gcggatcgcc gagaccacgt cccggacgag ggcgaggtcg
     2401 tgctcggccc ccgggtcggc gaagcctgcc aggggtgccg gccagggcgc ccgcatgatc
     2461 gacggctccc ctccctcacc ggcgtgcagc cgctgccaga tctcctcggt gatgaacggc
     2521 atgaacgggt gcagcagccg caggacggtg tcgagcacga agcggagcac ctgccgggcc
     2581 gccgcctcgc cggccgagcc cggctggcgc agtgccagct tggcgacctc
//
LOCUS       DATGJT010000407         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_675779, whole genome shotgun sequence.
ACCESSION   DATGJT010000407 DATGJT010000000
VERSION     DATGJT010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675779"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..820
                     /locus_tag="VKX24_07000"
     CDS             <1..820
                     /locus_tag="VKX24_07000"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HLJ08269.1"
                     /translation="RSGSAAVSGSAAVSGRAADSGPAASGRAAASGRAADSGPAPAPA
                     AAAVGGPVAPDFASPDFPAVLAAGTEELAGRDPVLARLVAAVGPCQLDRRRGLSHFGA
                     LCRSITFQQLAGRAAATIFGRFVLAVTGGDDAVALTPEGVLAVSEEALRGAGLSAAKT
                     RSIRAMAESARSGEVPLHDVERLSDEELIARLTAVPGIGRWTAEMFLIFQLGRLDVWP
                     VGDLGVRKGYGLAWGLPEAPTPKELDAYGETFRPFRSVAAWYCWRAVDTVVPDS"
     gene            830..1267
                     /gene="dut"
                     /locus_tag="VKX24_07005"
     CDS             830..1267
                     /gene="dut"
                     /locus_tag="VKX24_07005"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HLJ08270.1"
                     /translation="MRIPVRRIDPSLPLPTAAHQGDAGYDLRAREAVVLAPGGGRAAV
                     PTGIAVAIPPGWAGLVLPRSGLALRHGVTCLNAPGLIDAGYRDEIRVVLVNHDPADAF
                     EVAVGDRIAQLVIQEVAAIDWDEVEDLGQTTRGQGGFGSTGRQ"
     gene            1321..1396
                     /locus_tag="VKX24_07010"
     tRNA            1321..1396
                     /locus_tag="VKX24_07010"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1354..1356,aa:Gly,seq:gcc)
     gene            complement(1487..1921)
                     /locus_tag="VKX24_07015"
     CDS             complement(1487..1921)
                     /locus_tag="VKX24_07015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08271.1"
                     /translation="MAAEIEGIDLLVVAPQPGRAELDPEFVPAPPLGGKPFSEQSIQP
                     MTTSLPAAVELRPLHLGPVLDGVECKVRQILGPDVLVGERLVTWIVEADKATEFRPAH
                     HATRFGDGAGPAAAAGDTATAVIEDTPSRRTHRDERIPLMEK"
BASE COUNT          287 a          876 c          803 g          359 t
ORIGIN      
        1 ccgttccggt tccgccgccg tctcgggctc cgccgccgtc tcgggccgcg ccgccgactc
       61 gggccctgcc gcctcgggcc gcgccgccgc ctcgggccgc gccgccgact cgggccccgc
      121 gcccgcccct gccgccgccg ccgtcggcgg accggtcgcc cccgacttcg cctcgcccga
      181 cttccccgcc gtcctggcgg ccggcaccga ggagctggcc gggcgggacc cggtgctggc
      241 ccgcctcgtg gccgccgtcg ggccgtgcca gctcgaccgc cgccggggcc tgtcccactt
      301 cggcgccctg tgccgcagca tcacgttcca gcagctcgcc ggccgggcgg cggcgacgat
      361 cttcggccgg ttcgtgcttg cggtcaccgg cggcgacgac gctgtcgccc tcacgccgga
      421 aggcgtcctc gccgtctccg aggaggcgct ccgcggcgcc gggttgtcgg cggccaagac
      481 ccgctcgatc cgggccatgg ccgagagcgc ccggagcggc gaggtccccc ttcacgacgt
      541 cgagcgcctg agcgacgagg agctcatcgc ccgcctcacg gccgtccccg gcatcggccg
      601 gtggacggcc gagatgttcc tcatcttcca gctcggccgc ctcgacgtct ggccggtggg
      661 agacctcggc gtccgcaaag ggtacggcct cgcctggggc ctgcccgagg cgccgacgcc
      721 gaaggagctc gacgcctacg gggagacgtt ccggcccttc cggtcggtgg ccgcctggta
      781 ctgctggcgg gccgtcgaca ccgtggtacc cgactcctag gctccgccgg tgcgcatccc
      841 cgtccgccgg atcgacccct ccttgccgct gcccaccgcc gcccaccagg gcgacgccgg
      901 ctatgacctc cgggcccggg aagcggtggt gctggctccc ggcggcggac gggccgccgt
      961 ccccaccggc atcgccgtcg ccatcccgcc cggctgggcc ggcctcgtcc tgccccggtc
     1021 gggcctggcc ctgcgccacg gcgtcacgtg cctgaatgcc cccggcctga tcgacgccgg
     1081 ctaccgggac gagatccgcg tcgtcctggt caaccacgac cccgccgatg cgttcgaggt
     1141 tgccgtcggc gaccgcatcg cccagctggt gatccaggag gtcgcggcca tcgactggga
     1201 cgaggtcgag gatctcggac aaaccacccg cggccaggga ggattcggct ccaccggccg
     1261 ccaataagtc tcaccgacgt accctggccc ggccgggctt tggtatgttt cacggacaac
     1321 gcggacgtgg ctcagttggt agagcacaac cttgccaagg ttggggtcgc gggttcgaat
     1381 cccgtcgtcc gctccagaac aaaagagcag gtcaggggcc ccaaacgggg cccctttttc
     1441 atgctctgag gacccctcgg cgggcaccaa gtgcttcggg ccagagtcac ttctccataa
     1501 gggggatccg ttcgtcccgg tgggtccgcc tcgacggggt gtcctctatc actgcggttg
     1561 cggtgtcgcc ggctgcagcg gccgggcctg caccatctcc gaatcgggtg gcgtggtgcg
     1621 ctggtcggaa ttccgtggct ttgtcggcct cgactatcca cgtgacgaga cgctctccga
     1681 cgaggacgtc cggcccgagg atctgccgga ccttgcattc gacgccgtcg agtaccgggc
     1741 cgaggtggag cgggcgaagc tcgaccgcag ctgggagact cgtcgtcatc ggctggatcg
     1801 actgctcact gaacggcttg ccaccgagcg gcggcgctgg aacgaactcg gggtcgagtt
     1861 ccgctcgacc tggttgtggg gcgacgacga ggagatctat gccctcgatc tccgcagcca
     1921 accaaggtca ccaacttctc atcggcatcc gggccgaacc gggggcggac gacgaagcca
     1981 tcgtgaacgc gatggcgacc gacgtgctcg cccgggacga ggactcgtgg ttcgtgatct
     2041 acgaccagcg acatccatcc ctcccgacgg atccgccgta ggccgcctct cggccggcgc
     2101 ttcccccccg cccgtccgag accggcgcct attcggcgcc tgggtcggct gggtcggcgg
     2161 cctggcggtg gccatgagga actgccggga catggccatc gagtgcccgg tggcggcccc
     2221 tacgaagcgt gatcttcccg ctctgtcgct tggtactgat cccgccggtc gtcgagacgg
     2281 tgaccgtggg ggcactcggg caccgtgggg tgcgaccggt cgcgg
//
LOCUS       DATGJT010000408         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_158354, whole genome shotgun sequence.
ACCESSION   DATGJT010000408 DATGJT010000000
VERSION     DATGJT010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158354"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(350..>2379)
                     /locus_tag="VKX24_07020"
     CDS             complement(350..>2379)
                     /locus_tag="VKX24_07020"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HLJ08272.1"
                     /translation="FALTLADRTSMLYDGSSVAAGEALAVVVATGSATEARRAVAAGQ
                     QAPATGVEARLQHLTALTVPISIGAGAVTVAAGLLRRQPFGQLAAGAVSLAVAAVPEG
                     LPLLSSVAQLSAARRLARHGILVRNPRAIEALGRVQVMCVDKTGTVTEGRLSLNCVAF
                     LEGTEEVLDDLSELGRKLLRAGLRATPKPPPAGRLPHPTDAAVADAGLRAGIDARHGY
                     DDWERIDEMPFEPGRGFHATLAQRAGELILSVKGAPEIVLPRCTHWADGSNGAPVPMT
                     DDARARATETLQTLTRRGLRVLCVARRPATERRDLDDERVQNLIFLGFLAIADPVRPT
                     AAEAVRHLQAAGVSVVMITGDHPSTAEGIASELGLLNGHPTVTGAELDELDDEELTER
                     LPGVSVFARVTPAHKVRIVRALQQAGSVVAMTGDGANDAPAIRLADVGIALGRRSTEA
                     ARDAADLVVLDDRIEVLVDAVAEGRGMWVSVRDAVALLVGGNLGEIGFTVGGTLLGGQ
                     TPLNPRQLLLVNMLTDVAPAMAIAVQPPSRISFTDLLREGPEASLGSALDQAIVQRAI
                     CTGAAATGAWVVGRFTGTPARARTIGLAALVGTQLGQTLAAGRPSPATVASVVGSGAV
                     LVVVIQTPGVSQLFGCTPLDPVGWGTAAVAAAAGTGAALVLPRLWAARSTR"
BASE COUNT          315 a          844 c          928 g          292 t
ORIGIN      
        1 tctggcccag ggcatcgatc tcaccgacgg gcacacctgg gctgccgtcg ggcgctaaac
       61 cgcccgacgg gtatcggtcg ggaggtcggc cggctcagac gtacagcaga gcgggcttga
      121 cctgccggat gatggccctc acggccagct ccacgaggag cacgaccgcc gagaccagca
      181 gagactccag caatccgttc attggtaacc ctcgcgggga agtaggtgct gagggaactg
      241 cccttgatcc tgaacgcccg aggtggccca tcggttcggc ggcgaccacg atggcctcgc
      301 gtgaagatga attcttcctg acaggctctc tgacctgctc ctgaggcggt tatcgggtgc
      361 ttcgcgccgc ccacaaccgg ggcaggacga gcgccgctcc ggttccggcc gccgccgcca
      421 ccgccgccgt tccccacccg acggggtcga gcggcgtgca gccgaacagc tggctcacac
      481 cgggcgtctg gatgacgacg accagcacgg cacccgatcc gacgaccgag gccaccgtgg
      541 ccgggctcgg ccggccggcg gccagcgtct ggccgagctg ggtgccgacg agggcggcca
      601 gcccgatcgt gcgggcccgg gccggagtgc cggtgaaccg tccgaccacc caggcgccgg
      661 tggcggcggc gccggtacag atggcccgct ggacgatcgc ctggtcgagc gccgacccga
      721 gcgacgcttc cgggccctcc cggaggaggt cggtgaagct gatccgggac ggcggctgga
      781 cggcgatcgc catggccggc gccacgtcgg tcagcatgtt gaccagcagg agctggcggg
      841 ggttgagcgg ggtctgcccg ccgaggagcg tcccgcccac ggtgaagccg atctcgccga
      901 ggttgccgcc gacgaggagg gcgacggcgt cccggaccga gacccacatc ccccggccct
      961 cggccacggc gtccacgagg acctcgatgc ggtcgtcgag gacgacgagg tcggcggcgt
     1021 cccgggccgc ctcggtgctc cggcggccga gggcgatccc cacgtcggcc agccggatcg
     1081 ccggggcgtc gttggcgccg tcgccggtca tggccaccac cgaccccgcc tgctgcagcg
     1141 cccgcacgat ccggaccttg tgggccggcg tgacgcgggc gaagaccgaa acgccgggga
     1201 ggcgctccgt cagctcctcg tcgtcgagtt cgtcgagctc agcgccggtg acggtgggat
     1261 gcccgttgag caggccgagc tcggaggcga tgccctcggc ggtcgacggg tggtcgccgg
     1321 tgatcatcac caccgacacg ccggccgcct gcaggtggcg gacggcctcg gcggcggtcg
     1381 gccggacggg gtcggcgatg gccaggaagc cgaggaagat gaggttctgg acccgctcgt
     1441 cgtcgaggtc gcggcgctcc gtggccgggc ggcgggcgac gcagaggacc cgcaggccgc
     1501 gccgggtcag cgtctggagc gtttccgtcg cccgggcccg ggcgtcgtcg gtcatcggca
     1561 ccggtgcgcc attcgagccg tcggcccaat gggtgcagcg ggggagcacg atttccgggg
     1621 cgcctttcac ggacaggatg agctcgccgg cccgctgggc cagggtggcg tggaagcccc
     1681 ggcccggctc gaagggcatc tcgtcgatcc gctcccagtc gtcgtagccg tggcgggcgt
     1741 cgatgccggc ccgcaggccg gcgtcggcga cggcggcgtc ggtcgggtgg ggcaggcgcc
     1801 cggcgggcgg cggcttcggc gtggcccgca ggccggcccg gagcagcttg cggccgagct
     1861 ccgagaggtc gtcgaggacc tcctccgtcc cctcgaggaa ggcgacgcag ttgagcgaca
     1921 gccggccctc ggtgaccgtc ccggtcttgt cgacgcacat gacctgcacc cggcccaggg
     1981 cctcgatggc ccgggggttg cggacgagga tgccgtgtcg ggcgagccgc cgggcggccg
     2041 agagctgggc cacgctggac agcagcggca gcccttcggg cacggcggcc accgccaggc
     2101 tcacggcgcc ggcggcgagc tggccgaacg gctggcggcg cagcagcccg gcggcgaccg
     2161 tcaccgcccc ggcgccgatg gagatcggga cggtgagggc ggtcaggtgc tggaggcggg
     2221 cctcgacccc ggtggccggc gcctgctgcc cggcggccac cgcccggcgg gcctcggtgg
     2281 ccgagccggt ggccaccacg acggccaggg cttcgccggc cgccaccgac gagccgtcgt
     2341 agagcatcga ggtccggtcg gccagcgtga gggcgaacg
//
LOCUS       DATGJT010000409         2732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1091751, whole genome shotgun sequence.
ACCESSION   DATGJT010000409 DATGJT010000000
VERSION     DATGJT010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091751"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..>2732
                     /locus_tag="VKX24_07025"
     CDS             28..>2732
                     /locus_tag="VKX24_07025"
                     /inference="COORDINATES: protein motif:HMM:NF012907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HLJ08273.1"
                     /translation="MLAAAFVVSLVFTDVVAAGIAVAGAVAVAVVLRHRSRSASRTAL
                     FAVIAVATGVAVVAALTLPTYRARTHPLVLTTPAPAPTTATVPALGPAPAGGFTALGF
                     VASDYDDSGAGVDRDVAALSTLAATGITLAPQSGSIVVHSATDVLVRAHLGGAAGLAV
                     VSNYNGTVFDGPRAAAMLGSPQARHRFISALTGQMAHQGWDGVVLDLEQLPPSARADY
                     PELVRELGVAAGRRQVVVAVPAAAAGDDGTGPYDLRALGAAASAVVWMAYDQHGLASA
                     PGPVAGLPWVRAGLTAAESAVPRAKLLLGIPGYGYAWPASGPPTDLTAAAAHDLATAP
                     GATARWDDVEQEWTVHTADGRTVWYEDARSFAVRARLAHDDGLGGVALWRVGAEDPAA
                     LAQLPVPAVKHPASDKGRPIERVQAPGVVALTFDDGPDPQWTPRILQILRQNHVPATF
                     FVIGTEAQQYPALLRAEVAEGNVVGNHTYSHQNLANLPGWRAETEMVGGAAVVESIIG
                     VKPVLFRPPYGAGDRKGSDPGADAIAARLHDHVIDWNDDPNDWTRPGVDVITERVLAG
                     ATGRTVVLLHDGGGNRSQTVDALPAIIAGLRQRGFLFTTVDGLDASIGSPYAARHSLP
                     SEARGLALIAAFRLEMALRRMALYLLLAIAGLSILRIVVSAPLAVIQARNRRRRPPPP
                     PPEGLRFSIIVPAHNEGRVIAKSLAAIGRLQPGTAGGRDGAVEVIVVDDGSSDDTAEI
                     AATFPCRVLRQTQQGKAAALNAGIAASSGDVVVVLDADTVLAPDFLERIAPHFADPAV
                     GAVAGNVKVGNRRSFLARLQALEYIVSLNLDRRAQAQLNVMSVVPGAAGAFRRRALLD
                     AGGYPTDTLVEDADLTFTLLAAGWRIPYESAAVAWTEAPQRITARS"
BASE COUNT          330 a         1140 c          895 g          367 t
ORIGIN      
        1 ttgactcctc cccgtctggc cgtcgcggtg ctcgccgcgg cgttcgttgt cagcctggtg
       61 ttcaccgatg tcgtggctgc gggcatcgcg gtggccggcg ccgtcgccgt cgccgtcgtg
      121 ctgcggcacc gttcccgctc cgcgagccga acggcactgt tcgccgtcat cgccgtggcc
      181 accggcgtgg ccgtcgtcgc cgcgctgacg ctgccgacct acagggcccg gacgcacccg
      241 ctggtcctca caacgccggc gcccgcgccc acgacggcaa cggtgccggc gctgggtccc
      301 gctccggccg gcgggttcac cgccttgggt ttcgtggctt cggactacga cgactccggc
      361 gccggggtgg accgcgacgt ggcggcgctg tcgacgctgg ccgccaccgg catcacgctg
      421 gcgcctcagt cggggtcgat cgtcgtgcat agcgccaccg acgtcctggt ccgggctcac
      481 ctcggcggcg cggcggggtt ggccgtggtg tcgaactaca acggcacggt gttcgacggt
      541 ccccgggcag cggccatgct gggttcgccg caggcccgtc accgcttcat ctcggccctc
      601 accgggcaga tggcccacca gggctgggac ggcgtcgtgc tcgacctgga gcagctccca
      661 ccgtcggccc gggccgacta ccccgagctg gtgcgcgaac tcggggtggc cgccggccgc
      721 cgacaggtgg tggtggccgt cccggccgcc gccgcgggcg acgacggcac cgggccctat
      781 gacctgcggg cgctgggcgc cgccgctagc gccgtggtgt ggatggccta cgaccagcac
      841 ggcctggcct cggcgcccgg gccggtggcc ggcctgccct gggtgcgggc cgggctgacg
      901 gccgccgaat cggcggtccc cagagccaag ctgctgctgg gcatcccggg ctacggctac
      961 gcctggccgg cgtcgggccc gccgaccgac ctgaccgccg ccgccgccca cgacctcgcc
     1021 accgcccccg gggccaccgc ccgatgggat gacgtcgagc aggaatggac cgttcacacc
     1081 gccgacggcc gtaccgtctg gtacgaggac gcccgcagct tcgccgtccg ggcgcgcctg
     1141 gcccacgacg acgggctcgg cggcgtcgcc ctgtggcggg tcggcgccga agaccccgcg
     1201 gcgctggccc agctgcccgt ccccgccgtc aagcatccgg ccagcgacaa gggccggccc
     1261 atcgagcggg tccaggcccc cggcgtggtc gccctgacct tcgacgacgg acccgacccg
     1321 cagtggaccc cccgcatcct ccagatcctg cgccagaacc atgtgccggc cacgttcttc
     1381 gtcatcggca ccgaagccca gcagtaccct gcgttgctcc gggccgaggt ggccgagggc
     1441 aacgtcgtcg gcaaccacac ctactcccac cagaacctgg ccaacctgcc gggctggcgg
     1501 gccgagacgg agatggtggg cggggcggcg gtcgtcgagt cgatcatcgg cgtcaagccg
     1561 gtgctgttcc gcccccccta cggcgccggt gaccgcaaag ggtccgaccc cggcgccgac
     1621 gccatcgccg cccggctcca cgaccacgtc atcgactgga acgacgaccc caacgactgg
     1681 acccgccccg gcgtggacgt catcacggag cgggtgctcg cgggcgccac cggccgtacc
     1741 gtcgtcctcc tccacgacgg cggcggcaac cgcagccaga cggtcgacgc cctcccggcc
     1801 atcatcgccg gcctgcgcca gcgggggttt ctcttcacca ccgtcgacgg cctcgacgcc
     1861 tccatcggct ccccctacgc cgcccgacac agcctcccct ccgaggcccg ggggctggcg
     1921 ctgatcgccg ccttccgcct cgagatggcc ctccgccgca tggccctcta cctcctgctg
     1981 gccatcgccg ggctgtccat cctgcgcatc gtcgtctcgg cgccgctggc ggtgattcag
     2041 gcccgcaacc gccgccgccg cccgccgccc cctcccccgg agggcctgcg gttcagcatc
     2101 atcgtccccg cccacaacga gggccgggtc atcgccaaat ccctggccgc catcggccgc
     2161 ctccaacccg gcaccgccgg cggccgggac ggcgccgtgg aggtcatcgt cgtcgacgac
     2221 ggctccagcg acgacaccgc cgaaatcgcc gccaccttcc cctgccgcgt cctccgccag
     2281 acccagcagg gaaaggccgc cgccctcaac gccggcatcg ctgcctcctc cggcgacgtc
     2341 gtcgtggtcc tcgacgccga caccgtcctc gcccccgact tcctagagcg catcgccccg
     2401 cacttcgccg atcccgccgt gggggcggtc gccggcaacg tcaaggtcgg caaccgccgc
     2461 tccttcctgg cccgcctcca ggcgctggag tacatcgtca gcctcaacct cgaccgccgg
     2521 gcccaggccc agctcaacgt catgtccgtc gtccccggcg ccgccggcgc cttccgccgc
     2581 cgggccctcc tcgacgccgg cggctacccc accgacaccc tggtggagga cgccgacctc
     2641 accttcaccc tcctcgccgc cggctggcgc atcccctacg aatccgccgc cgtggcctgg
     2701 accgaagccc cgcaacggat caccgccaga tc
//
LOCUS       DATGJT010000410         2585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1091797, whole genome shotgun sequence.
ACCESSION   DATGJT010000410 DATGJT010000000
VERSION     DATGJT010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091797"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..324)
                     /locus_tag="VKX24_07030"
     CDS             complement(<1..324)
                     /locus_tag="VKX24_07030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013931902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ08274.1"
                     /translation="MNVAAERPMEHPGDVPLDVRNVTKRFKRKGRRPAGSGGPRRRRG
                     AHTAVDSVSFRMEPREIYGVIGANGSGKSTLIRMLSTLLIPDEGEISLFGRDVVADPA
                     AARPLL"
     gene            complement(625..699)
                     /locus_tag="VKX24_07035"
     tRNA            complement(625..699)
                     /locus_tag="VKX24_07035"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(662..664),aa:Asp,seq:gtc)
     gene            complement(789..956)
                     /locus_tag="VKX24_07040"
     CDS             complement(789..956)
                     /locus_tag="VKX24_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011718926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrophobic protein"
                     /protein_id="HLJ08275.1"
                     /translation="MGCLLLFLLLIAIAFVGAGFAVHLLWVFAAVFAFFWLAGYAFGR
                     GRDRAARRRLR"
     gene            complement(1033..1863)
                     /locus_tag="VKX24_07045"
     CDS             complement(1033..1863)
                     /locus_tag="VKX24_07045"
                     /inference="COORDINATES: protein motif:HMM:NF041646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VC0807 family protein"
                     /protein_id="HLJ08276.1"
                     /translation="MADQVEPSPERFADVDTSLGAAATSAPVEEDWEPGLPPLRSIAP
                     SVIGGAAVPLAVYYIVRSHVGSDADALAIAGIPASIWVLSQFIRKHRVDAIGAIVLFG
                     FIVGLVVSFALGGNAFVLKVRDSGFTFLFGLTSVVTTRFGRRPVIFYIGRGLSAGTDP
                     VRIRHFDELWELPPARALFKILGLLWGFGLMIDAGVRIALAADLSTKSFLAVSPVASF
                     VFIGAMAAATFALVTRARARGPLVDPATLPAGGGGTLWWLRVFLVPPSGLLAERQPEG
                     "
     gene            2028..>2585
                     /locus_tag="VKX24_07050"
     CDS             2028..>2585
                     /locus_tag="VKX24_07050"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HLJ08277.1"
                     /translation="MTEDTGLDAVTGAFSYSGRAIADRLLGGSRRVRTLTGHPGRAPS
                     DTAIDVRPLDFRDPAGLDASLRGVTTLYNTYWVRFAHGNVDHDVAVANSEALFAAAAR
                     AGVRRIVHVSITHADPGSPYPYFRGKGRVEAALDRSGVSHGIVRPAILFGGDGVLINN
                     IAWLLRHLPVFAIGGDGEYRVRPMHV"
BASE COUNT          436 a          904 c          904 g          341 t
ORIGIN      
        1 gagcaacggg cgcgccgctg ccgggtcggc gacgacgtcg cgaccgaaga gcgagatctc
       61 gccttcgtcg gggatgagca gcgtcgagag catccgaatg agcgtcgact tgccggagcc
      121 gttggccccg atcacgccgt agatctcgcg tggctccatc cggaacgaga cggagtcgac
      181 ggccgtgtgg gcgcctctcc ggcggcgcgg cccgccgctc cctgctggcc ggcggccttt
      241 gcgcttgaac ctcttggtga cgttgcgaac atccagcggc acatcccctg gatgctccat
      301 cggccgctcg gcggccacgt tcatgtcttt tctcctcact cgagcgatcg gctgaaacgg
      361 ggcgtcgcat cgcgcgacgc gccagcgggg gacccgcggc cgcttcccga gcgagggggg
      421 ccgcggacct agtacttgtg cattccggcc acggggcaac ggtaccagcc gtacgggagc
      481 cggctcactg agccggcggc ctacgtcggt atggagaagg tgaccgccga ctcaaccgcg
      541 tacgacctgc ccgagggccg ggtcgaccct cttcgagcac atcgagggag gtgccccggc
      601 agtgccggtc tatcgaaatc cgagcggacc tgacgggatt tgaacccgcg acctccggct
      661 tgacaggccg gcgtgcactc caaactgcac cacaggtcca cggcggcggc gatcccctct
      721 ggatcggtcg gccgagacgc caactatagg tctcgacatc ctgggccgga tcgggaggag
      781 ccgcccagtc agcgcaggcg ccgtcgggca gcgcggtcgc gtccccggcc gaacgcgtac
      841 ccggcgagcc agaagaaggc gaacacggcg gcgaagaccc agagcaggtg gacggcgaaa
      901 ccggcaccga cgaaggcgat cgcgatcagc aagaggaaca gcaggagaca ccccacggca
      961 ccaccgcacc acggctgcct ggtcgtgtca aggcggcccc ggcggtcagc ccgggccaac
     1021 caggcgattg ggtcagccct cgggctggcg ctcggcgagc agtccggacg gcggaaccag
     1081 aaagactcgc agccaccaca gggtccctcc gccgccggcg gggagggtcg cagggtcgac
     1141 gaggggcccc ctggcccggg cccgggtcac cagcgcgaac gtggccgccg ccatcgcgcc
     1201 gatgaacacg aagctggcca ccggagagac tgccagaaag gacttggtcg agaggtcggc
     1261 ggcgagggcg atccgcacgc cggcgtcgat catgagcccg aacccccaca ggaggccgag
     1321 gatcttaaac agggcccgcg ccggcggcag ctcccagagc tcgtcgaagt gcctgatcct
     1381 gacagggtcc gttcccgccg agagcccacg tccgatgtag aagatgaccg gccgtcgacc
     1441 gaaccgcgtc gtcacgaccg aggtgagtcc gaacaagaag gtgaacccgg agtcccggac
     1501 cttgaggacg aacgcgttac cgcccagggc gaaggacacg accagcccaa cgatgaatcc
     1561 gaacaggacg atcgcgccga tggcgtcgac ccggtgcttt cggatgaact gactcagcac
     1621 ccagatggag gccgggatcc cggcgatggc gagcgcatcg gcgtcgctgc cgacgtggga
     1681 tcgcacgatg tagtacacgg cgagggggac ggccgccccg ccgatcacgc tcggggcgat
     1741 cgagcgcagc ggcggcaggc cgggctccca gtcctcctcg acgggggcgg aggtcgcggc
     1801 ggccccgagc gaggtatcga cgtctgcaaa ccgttcgggc gacggctcta cctggtcggc
     1861 cacagttccc cttcggacgc tctgcgcaac actaggcgcg tccttcgggt cgacggtcgg
     1921 ggggcagccg caacacgaac ggctcgcacg acatcggacg ccggggtcga cagccccttt
     1981 tggctgctcg tgatcggctc ccctacggtg ctggtggtgc gggctccatg acggaggaca
     2041 ccggtctcga cgccgtcacc ggtgccttca gttactcggg gcgggcgatc gcggatcgcc
     2101 tgctgggcgg ctctcgccgg gtccggaccc tgaccgggca ccccggccgg gcaccgtccg
     2161 acacggccat cgacgtgcga cccctcgact tccgcgaccc cgccgggctc gacgcgtccc
     2221 tgcgcggcgt caccacgctc tacaacacct actgggtgcg gttcgcccac ggcaatgtcg
     2281 atcacgacgt cgcggtcgcg aactccgagg cgctcttcgc ggcggccgcc cgcgccgggg
     2341 tgcgacggat cgtgcacgtg agcatcaccc acgccgaccc cgggtcgccc tacccgtact
     2401 tcaggggaaa gggaagggtg gaggcagcgc tcgaccgcag cggcgtgtcc cacgggatcg
     2461 tccggccggc gatcctgttc ggcggagacg gggtgctcat caacaacatc gcctggctcc
     2521 tgcgccatct cccggtgttc gccatcggcg gagacggcga gtaccgggtg cgaccgatgc
     2581 acgtc
//
LOCUS       DATGJT010000411         4582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_986713, whole genome shotgun sequence.
ACCESSION   DATGJT010000411 DATGJT010000000
VERSION     DATGJT010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4582
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986713"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VKX24_07055"
     CDS             <1..653
                     /locus_tag="VKX24_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08278.1"
                     /translation="PIVGMAATPSGNGYWLVASDGGIFAFGDARFHGSTGAIHLNQPI
                     VGIAATQSGQGYWLVASDGGIFSFGDAAFHGSTGNLHLQRPIVGMTATADGGGYWFVA
                     SDGGIFAFGDARFHGSMGGHHLNRPVVGMAADLATGGYWLVASDGGIFAFDAPFRGSM
                     GATRLNRPISGLVPGHDGYLMVAEDGGIFSFGDVAFHGSLGAHPPASPVVGAALLP"
     gene            810..1280
                     /locus_tag="VKX24_07060"
     CDS             810..1280
                     /locus_tag="VKX24_07060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08279.1"
                     /translation="MDQGVPLREAAARLGVSPEALRKRILLGQVPAEREPAGHRRYLI
                     PESVLAELAAGVAGPAGPSRIRRLRVVGEGELPVEALGDVVGLLRDQFEALRAERDRL
                     LDEVGRLQGELDSAEVRRAALEGELDRLRRRLASAPAFFLAGLGRLEAEWRDAP"
     gene            complement(1308..1778)
                     /locus_tag="VKX24_07065"
     CDS             complement(1308..1778)
                     /locus_tag="VKX24_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013228771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HLJ08280.1"
                     /translation="MAYIVDFENVSTTGLESSPVAAALAGLRANEARYFKNKYGHDFT
                     VEPAGTAKDTVDWVHHILKEERDIVISSRPLEATSFQVENIRMAYVFYESGLSINVMY
                     TVDDAKKRAVGFKLSEGMDVPEELASRFKFARQKSKLAGTIRGSYFVLKHEYDR"
     gene            2172..4445
                     /locus_tag="VKX24_07070"
     CDS             2172..4445
                     /locus_tag="VKX24_07070"
                     /inference="COORDINATES: protein motif:HMM:NF039533.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HLJ08281.1"
                     /translation="MLAAARVDAYTLVARDGGVFTYGGASFHGSTGNLHLSSPIVGLA
                     ERPSEDGYWIVAADGGVFAFGNAGFHGSLGAVHLRSPIVGIAATPSGNGYWLVAADGG
                     VFSFGDATFFGSTGGIRLHSPIVGIAATSTGQGYWMVAADGGIFSFGDAPFFGSTGGI
                     RLNSPIVGITATPAGDGYWMVAADGGIFAFGTAGFHGSAGSIRLNSPIVGLAATHSGG
                     GYWIVGADGGVFNYGDASFEGSAGALRLGSPIVGIGVSPDVAPSLTLSGSGSGAATLS
                     NTGHVTVSGLASDPDDAVGSVEVGVDGAAFSTSGVTCTGCGSADVRFTFTAASAVSDG
                     THQLRIRAVDSFGLVSSAASATILVDTHAPTVTITGGPADGSVTADATPTFSGSAGDG
                     GSGVMRIAVSLDGGAFSSSGVSCSNCGGGHAAATWTGQASGHLADGPHTFAVESVDAA
                     GNLSVSASHHFTVDTTPPAAPAVVAVPTVNAANHAAVSVSGTAEANSTVALTVADGGS
                     GSVVAHTTADGSGNWTVSGLDLSTLADGSVGATATATDAAGNVSAVSSAHLAVKDTVP
                     PAVSVTAAGDANLTTQSNVAVSGTTEAGAGVTVVASDGTHSTGPVLATVAGNGSWNAT
                     VDVSSLDDGTVTYTATATDAALNVGTDATTATKDTVVPTLDGITATDLSTTVTLHFSE
                     AVQCSGSSTFVVTVGGLPDVMTVDCSGPAGTTLTGTLAVPALLGQDVDVTPGAGAVTD
                     VTGNAVASVQVSAITGL"
BASE COUNT          584 a         1800 c         1540 g          658 t
ORIGIN      
        1 ggccgatcgt gggcatggcg gcgacgccaa gcggtaacgg ctactggctg gtcgcgtcgg
       61 atggcgggat cttcgcgttc ggcgacgcgc gcttccatgg ctcgaccggg gccatccacc
      121 tcaaccagcc catcgtcggc atcgcggcga cgcagtcggg ccagggctac tggctggtgg
      181 cgagcgacgg ggggatcttc tcgttcggcg acgccgcctt ccacggctcg accggcaacc
      241 tccacctgca gcgcccgatc gtcggcatga cggccaccgc cgacgggggc ggctactggt
      301 tcgtcgcctc cgacggcggc atcttcgcct tcggcgatgc ccggttccac ggctccatgg
      361 gcggccacca cctcaaccgc ccggtcgtcg gcatggccgc cgacctcgcc accggcggct
      421 actggctggt ggcctccgac ggcgggatct tcgccttcga cgcccccttc cgcggttcca
      481 tgggcgccac ccggctcaac cggccgatct cgggtctcgt ccccggccac gacggctacc
      541 tgatggtggc cgaggacggc ggcatcttct ccttcggcga cgtcgccttc cacggctccc
      601 tcggcgccca tcccccggcc tcgccggtcg tgggggccgc cctcctcccc tgacgttcgc
      661 cgagggatgc ggcatcggca acccggttgg caaccgcttg gagaaccacg cccgggttga
      721 cccccccggt ccggggtggt tccatggtct ccaaccgggc tctccaactg gttggagaca
      781 gccgggacgg cggcggggga ggggagcggg tggatcaggg agtgccgctg cgggaggcgg
      841 cggcccggct cggcgtgtcc cccgaggcgc tccggaaacg gatcctcctc ggtcaggtcc
      901 cggcggagcg ggagccggcc ggccaccgcc gctatctgat cccggaatcg gtgctggccg
      961 agctggccgc cggggtcgcc ggaccggccg ggccgtcgag gatccggcgc ctccgggtgg
     1021 tcggcgaagg ggagctcccc gtcgaggccc tcggcgacgt cgtcggcctg ctgcgcgacc
     1081 agttcgaggc gctccgggcc gaacgggacc ggttgctgga cgaggtcggg cggctccagg
     1141 gcgagctgga cagcgccgag gtccgccgcg ccgccctcga gggcgagctc gaccggctgc
     1201 gccggcggct ggcgtcggcg ccggcgttct tcctggccgg tctcggccgg ctcgaagcgg
     1261 aatggcgcga cgcgccgtag cgcagcgccg ggccgggccg gctcggccta ccggtcgtac
     1321 tcgtgcttca ggacgaagta cgaaccgcgg atggtcccgg ccagcttcga cttctgccgg
     1381 gcgaatttga accgtgaggc cagctcctcg gggacgtcca tcccttcgga gagcttgaac
     1441 cccaccgccc gcttcttggc gtcgtcgacg gtgtacatga cgttgatgga caggccgctc
     1501 tcgtagaaca cgtaggccat ccggatgttc tcgacctgga aggacgtcgc ctccaggggc
     1561 cgcgacgaga tgacgatgtc gcgttcctcc ttgaggatgt ggtggaccca gtcgaccgtg
     1621 tccttggccg tgccggccgg ctcgaccgtg aagtcgtggc cgtacttgtt cttgaagtag
     1681 cgggcctcgt tggcccgcag accggcgagc gccgccgcca ccggcgacga ctccaggccg
     1741 gtggtcgaga cgttttcgaa gtccacgatg taggccatca cgcgctcccg aacgggccga
     1801 ggggatgtca attccgtcgg ccggaggcta tccgagccgg gaacgtcccg gtgccgcacg
     1861 ccctgctccg ggtgccgccg ccgtgccggc gtgccctcgg ggccaagcga aatcgccgga
     1921 taccggcgga ttgcggcgtt ctcagtcctc cggcgagcgc tgacgaaaac ggagccgatc
     1981 tccgggttcg tcccggcccg tcccgacgcc cgcaacggcg tcgacgttcg aaaggctccc
     2041 ggtgcattcc cgattcactg tgatcacccg caggctgcga ttcctggccg gtgccgtcgc
     2101 cggcggcggc atcgccctcg cttccgtgtt cggcgggacc tccgccaccc cgtcctcgcc
     2161 gctccccgcc cgtgctcgcc gccgcccggg tcgacgccta caccctggtg gcccgcgacg
     2221 gcggcgtctt cacctacggc ggcgcctcct tccacggttc gaccggcaac ctccacctga
     2281 gcagcccgat cgtcggactc gccgagcgtc ccagcgagga cggctactgg atcgtcgccg
     2341 ccgacggcgg cgtcttcgcc ttcgggaacg ccggcttcca cggctcgctc ggagcggtgc
     2401 acctccgcag ccccatcgtc gggatcgccg ccaccccctc cggcaacggc tactggctcg
     2461 tcgccgccga cggcggcgtg ttctccttcg gcgacgccac cttcttcggt tcgacgggcg
     2521 gaatccggct ccacagcccc atcgtgggga tcgccgccac gtccaccggc caggggtact
     2581 ggatggtcgc cgccgacggc gggatcttct ccttcggtga cgccccgttc ttcggctcga
     2641 ccggcggcat ccggctcaac agcccgatcg tggggatcac cgccaccccc gccggcgacg
     2701 gctactggat ggtggcggcc gacggcggca tcttcgcctt cggtacggcc ggcttccacg
     2761 gctcggcggg cagcatccgt ctcaacagcc cgatcgtcgg attggccgca acccactccg
     2821 gcggcggcta ctggatcgtc ggcgccgacg gcggcgtctt caactacggc gacgcctcct
     2881 tcgagggctc ggccggagcg ctccgcctgg gcagcccgat cgtcggcatc ggcgtcagcc
     2941 ccgacgtcgc cccctcgctc accctgagcg gctccggcag cggggcagcg accctcagca
     3001 acaccgggca cgtcacggtg tccggtctgg cctccgaccc cgatgacgcc gtcggatccg
     3061 tcgaggtcgg cgtcgacggc gccgccttct ccaccagcgg cgtgacgtgc accggctgcg
     3121 gcagcgccga cgtccgcttc accttcaccg ccgcctccgc cgtgagcgac gggacccacc
     3181 agctccgcat ccgcgccgtc gacagcttcg ggctggtctc ttcggccgca tcggccacga
     3241 tcctcgtcga cacccacgcc ccgacggtca ccatcaccgg agggcccgcc gacggctccg
     3301 tcacggccga cgccaccccg acgttcagcg gatcggcggg cgacggcggc agcggtgtca
     3361 tgcggatcgc agtcagcctc gacggcggcg ccttcagctc cagcggcgtg agctgctcga
     3421 actgcggcgg cggccacgcc gccgccacct ggaccgggca ggcgtccggc cacctcgccg
     3481 acggtcccca caccttcgcc gtcgagtccg tcgacgccgc cggcaacctg tcggtcagcg
     3541 cctcgcacca cttcaccgtc gacacgaccc cgcccgccgc gccggccgtc gtggccgtcc
     3601 cgacggtcaa cgccgccaac cacgccgcgg tcagcgtgtc ggggaccgcg gaggccaact
     3661 ccaccgtggc cctgaccgtg gccgacggcg ggagcgggtc ggtcgtggcc cacacgaccg
     3721 ccgacgggtc gggcaactgg accgtctcgg ggctggacct gtccaccctg gccgacggct
     3781 cggtcggcgc caccgccacc gccaccgacg ccgccgggaa cgtcagcgcc gtctcgtccg
     3841 cccacctggc cgtcaaggac accgtcccgc cggcggtgtc ggtcaccgcc gccggtgacg
     3901 ccaacctgac cacccagagc aacgtggccg tctcgggcac caccgaggcc ggcgccggcg
     3961 tgaccgtcgt cgccagcgac ggcacccaca gcaccggccc cgtcctggcc accgtcgccg
     4021 ggaacggcag ctggaacgcc accgtggacg tgagctccct cgacgacggg acggtcacct
     4081 acaccgccac cgccaccgac gccgccctca acgtcggcac cgacgccacg accgccacga
     4141 aggacaccgt ggtcccgacc ctggacggca tcaccgccac ggacctgtcc accaccgtga
     4201 cgctccactt cagcgaagcg gtgcagtgca gcggctccag cacgttcgtc gtcaccgtcg
     4261 gcggcctgcc cgacgtcatg accgtcgact gctccggccc ggccggtacc acgctgacgg
     4321 gcacgctcgc cgtccccgcg ctgctcggcc aggacgtcga cgtcacgccg ggcgccggcg
     4381 ccgtcaccga cgtcaccggc aacgccgtgg ccagcgtcca ggtcagcgcc atcaccggcc
     4441 tctgacagca ccgccgcacc catccgcagg aacgggaagc ccccacggcc ggcgccgtgg
     4501 gggcttcccc cgtggtgtcg gcggccgccc gtaccgctcg cgttcttcac gcaccttccg
     4561 cactgctgag cgcggcggac gc
//
LOCUS       DATGJT010000412         5822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1403353, whole genome shotgun sequence.
ACCESSION   DATGJT010000412 DATGJT010000000
VERSION     DATGJT010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5822
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403353"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /locus_tag="VKX24_07075"
     CDS             <1..910
                     /locus_tag="VKX24_07075"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: protein motif:HMM:NF014685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0051073 - adenosylcobinamide-GDP
                     ribazoletransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HLJ08282.1"
                     /translation="GAGAAGGGGGDVSMETLLGVDAPVHGSGLRQAVTFLTPFGPAAT
                     PTPAALAWFPVVGAVIGLLLGGVWWAAEAAMGPLPAAAVVVAADLAFTGALHFDGLLD
                     SADGLLPHLRSQRRLAVMADPHIGAFAVAVGAGALLLRTAAVAGFGDARPWLLAALWC
                     LARTAMAVTALTGRYARSHGLASAFLARPGDPVAGMPAGSPGGPPAASPGGPPAASAG
                     GGPAAAVRPAWLVPAALGAVLSLGLALAEDPRSVAAVVAAGAAAAGVGWFARRRIGGF
                     TGDTLGATGVVSETVGLLTAVAVLHR"
     gene            1018..2067
                     /gene="cbiB"
                     /locus_tag="VKX24_07080"
     CDS             1018..2067
                     /gene="cbiB"
                     /locus_tag="VKX24_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018553325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HLJ08283.1"
                     /translation="MVGDRLFGEPPAIIHPVALFGRAMTKLEQFVRGDAGPAERGVNL
                     THGNVERAAGSGGGTGVPAAWRHGRPGGTAYAAIGVGLGWTGGSALGPSLAAGAVATS
                     MVVAGRALGEEAVAVGERLAAGDLDGARRRLPALVGRDPESLDAKDVARAVIESVAEN
                     TVDAVVAPACWAAVLGAPGAGVYRAVNTLDAMVGHRNPRYARFGWASARLDDAANWVP
                     ARLTGLLVAAVRPGRAGEVLGAVIHPPDHPSPNAGVVEAAFAAALGVRLGGDTVYGGR
                     VDPRPAFGSGRPPEPADIDAAVRLSRDVTLALAAVLAAPALVRALRRRRPGAIGVPHG
                     RHAAVRNAGSAEAAP"
     gene            2124..3068
                     /locus_tag="VKX24_07085"
     CDS             2124..3068
                     /locus_tag="VKX24_07085"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLJ08284.1"
                     /translation="MDVAAADVPPAGAHGGDAAAVAGALGCEPAEILDLSASFNPEAP
                     DITALAARRLDSLGRYPDAAAATEAMAAALDTTADRVLLTNGGAEAIALVAGDLGRAA
                     VARPPEFSLYARHLHEAVDPAADPAAPLIRSNPNNPTGRLAAAFEDAAVWDEAFYPLA
                     TGRWSRGDLAAGRAAVVIGSLTKVFACPGLRVGYVYADPARIARLARRQPRWALNGLA
                     AALVPELLARADLPAWAAANARRRAALTAAVPGAEPSDANFVLVRVEDGAAAVRARLA
                     RRGVLVRDCTSFGLPRHVRVAVPDEAGLARLVEAWEAS"
     gene            3065..4597
                     /locus_tag="VKX24_07090"
     CDS             3065..4597
                     /locus_tag="VKX24_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018635726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HLJ08285.1"
                     /translation="MTAAGLRGALMVCGTTSDAGKSRVVTGLCRALARRGVSVAPFKA
                     QNMALNSYVTPSGHEIGRAQGVQALAAGVEPDVDMNPILLKPSSDRTSQVVVLGQPVG
                     HLDAAAYHAAKPGLRSTVVAALERLRARFDVVLLEGAGSPAEINLLDGDLVNLWLART
                     AGIPAVVVGDIDRGGVFATLFGTVTLLPDDLRNCVKAFVVNKFRGDPALLEPGLAELR
                     ARTGVPTIGVLPWVDGLHLDAEDSLALRRPWDSDEPPGGPPAGDVLDVAVVRFPRISN
                     FTDLDALALEPGVGVRYVTHAAGLGAPDLVILPGTKATVADLAWLRARGLDAALAALA
                     PSATVLGICGGYQMLGRSIDDAVESGAGAVAGLGVLPAVTRFEATKITRPRRGVALGQ
                     PVTGYQIHHGRSVSESPWVTLDDHWGRQPEGGADDGGGRVAAFGTSLHGLFESDGFRA
                     AFLAAVAARRHKRFTASGLSFAAAREAQFDRLADLVEAHLDMAAVESLIASGAAAVRE
                     PV"
     gene            4594..>5822
                     /locus_tag="VKX24_07095"
     CDS             4594..>5822
                     /locus_tag="VKX24_07095"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF014563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HLJ08286.1"
                     /translation="MILFLSTADTEILALRAAVESLPDGFPPVRAGSPARLQEAPPLD
                     GVAAVVVRLLGGRRAWEAPFDALARECRRRDVALLAFGGEAALDPELTAASTVAAAVI
                     GEAFPYLLHGGPANTANLLRFVADEVLGASPPYAYGAAEPVPDEGIYRRGPGLDPDFD
                     PARPTVGVVFYRAHLLAGNTVFVDDLCAALREQGANALACWCYSLRPDERGDVPVVTR
                     FLEGRVDAVVTTVLAMGQAGPEADSWDVPVLARLDVPVVQAVAATTSRAAWEEHDVGL
                     SPLDTAWSVALPEFDGRIISVPLSFKEIVDDGDDLGVPVVAYRTVPDRVARVAGTAVR
                     LARLRRKPNADKRIAVVLSAYPTKRGRIGNAVGLDTPASVIGLLHAFRDAGYRVEGIP
                     ADGDALIAELVDRFSYE"
BASE COUNT          582 a         2309 c         2151 g          780 t
ORIGIN      
        1 cggggccggg gccgccggcg gaggcggcgg ggacgtttcc atggaaacgc ttctgggcgt
       61 cgacgcgccc gtccacggca gcgggctccg gcaggcggtg acctttctga cgccgttcgg
      121 gccggcggcc acccccacgc cggcggcgct ggcctggttc cccgtcgtgg gggcggtgat
      181 cggtctgttg ctcggcggcg tctggtgggc ggccgaggcg gcgatgggcc cgctcccggc
      241 ggcggccgtg gtggtggcgg ccgatctggc gttcaccgga gccctgcact tcgacggtct
      301 gctcgacagc gccgacgggc tcctgcccca cctccggtcg caacggcgcc tagcggtgat
      361 ggccgatccc cacatcggcg ccttcgccgt cgccgtcggg gccggtgcac tcctgctccg
      421 gacggcggca gtggccggct tcggcgatgc ccggccgtgg ctgctggccg cactgtggtg
      481 cctggcccgc acggccatgg ccgtcaccgc gctgaccggc cgctacgccc ggagccacgg
      541 tctggcctcg gccttcctcg cccggccggg agacccggtc gccggcatgc ccgcgggctc
      601 gcccggcggc ccgcccgcgg cctcgcccgg cggcccgccc gcggcctcgg ccggcggcgg
      661 accggcggcc gcggttcgtc cggcctggct cgtgcccgcg gccctcgggg ccgtcctctc
      721 gctcggcctg gccctcgccg aggacccgag gtctgtcgcc gccgtggtgg cagcgggcgc
      781 ggccgccgcc ggcgtcgggt ggttcgcccg gcggaggatc ggcgggttca ccggcgacac
      841 cctcggcgcc accggcgtcg tctccgaaac cgtggggctc ctcaccgccg tggccgtcct
      901 ccaccgatga ccgcgaccgg tggcgctgcc gggcctgttc acggccgtgg ataccgccgc
      961 ggcgcgaccg gtcgcgcccc ccggtgggcg accttcccgg ccgcggccgc catcggattg
     1021 gtcggcgacc ggctgttcgg cgagcccccg gcgatcatcc atccggtggc gctcttcggc
     1081 cgggcgatga cgaagctcga gcagttcgtc cgcggagacg ccggccccgc cgagcgcggg
     1141 gtcaacctga cgcacggcaa cgtcgagcgc gctgccggct ccggcggtgg aacgggtgtc
     1201 ccggccgcat ggcggcacgg ccggccgggc ggcacggcgt atgccgcgat cggcgtcgga
     1261 ctcggatgga caggggggtc cgccctcgga ccgtcgctcg cggcgggcgc cgtcgccact
     1321 tcgatggtcg tggccgggcg ggcgctcggt gaggaagcgg tggccgtcgg cgagcggctg
     1381 gccgcgggcg acctcgacgg agcccggcgc cgcctccccg ccctggtggg ccgggacccc
     1441 gagtcgctcg acgccaaaga cgtcgcccgg gccgtcatcg agtcggtggc cgagaacacc
     1501 gtcgacgccg tggtcgctcc ggcgtgctgg gccgccgtcc tcggggcccc cggcgccggg
     1561 gtgtaccggg cggtcaacac actcgacgcc atggtgggcc accgcaaccc tcgctatgcc
     1621 cgcttcggtt gggcctccgc ccgcctcgac gacgccgcca actgggtgcc ggcccggctg
     1681 accggactgc tggtggcggc ggtgcgaccg gggcgcgccg gcgaggtcct cggcgcggtg
     1741 atccatccgc cggaccatcc gagccccaat gccggggtgg tcgaggcggc cttcgccgcc
     1801 gccctcggcg tacgcctcgg cggcgacacc gtctacggcg gccgggtcga cccccggccc
     1861 gccttcgggt cgggccgtcc accggagccc gccgacatcg acgccgccgt ccgcctctcc
     1921 cgggatgtga cgctggccct cgccgccgtc ctcgccgctc ccgctctcgt ccgggccctg
     1981 cgccggcgcc gcccgggtgc aattggcgtt cctcacggcc gccatgccgc cgtgaggaac
     2041 gccggttcgg cggaggcggc cccgtgagcg ccgggcccgt gcttcgagga acaccggctc
     2101 gtccggcggc ggacgttgcg gcgatggacg ttgcggcggc tgacgttccg ccggcggggg
     2161 cgcatggcgg ggatgccgcc gccgtggccg gggcgctcgg gtgcgagccg gccgagatcc
     2221 tcgatctctc cgccagcttc aaccccgagg caccggacat caccgctttg gcggcccggc
     2281 ggctcgacag cctcggccgc taccccgacg ccgccgccgc cacggaggcc atggccgccg
     2341 ccctcgatac cacggccgac cgggtgctgc tgaccaacgg cggtgccgag gcgatcgccc
     2401 tggtggccgg cgacctgggc cgggcggcgg tggcccgtcc gccggagttc tcgctctacg
     2461 cccggcacct ccacgaggcc gtcgatcccg ccgccgatcc ggcggcgccg ttgatccggt
     2521 ccaatcccaa caaccccacc gggcggctgg ccgccgcctt cgaggacgcc gccgtctggg
     2581 acgaggcgtt ctatccgctg gccaccggcc ggtggtcgag gggcgacctg gccgccggtc
     2641 gggcggcggt cgtgatcggc tcgctgacca aggtgttcgc ctgcccgggg ctccgggtcg
     2701 ggtacgtgta cgccgacccc gcccgcatcg cccggctggc ccgccgccag ccccgatggg
     2761 cgctgaacgg cctggccgcg gcgctcgtcc cggagctcct ggcccgggcc gacctgccgg
     2821 cctgggcggc ggccaatgcc cgccggcggg cggcgctcac cgccgccgtt cccggcgccg
     2881 agccctcgga cgccaacttc gtgctcgtcc gggtggagga cggcgccgcc gccgtccggg
     2941 cccgcctcgc ccgccgcggc gtcctcgtcc gggactgcac cagcttcggg ctgccccggc
     3001 acgtccgggt ggcggtcccc gacgaggccg ggctggcccg cctcgtcgag gcctgggagg
     3061 cgtcgtgacc gccgccgggc tgcggggggc gctcatggtc tgcggcacga ccagcgacgc
     3121 cgggaagagc cgggtcgtca ccgggctgtg ccgggcgctg gcccgccgag gggtttccgt
     3181 tgcgccgttc aaggcccaga acatggcgct caactcctac gtcacgccga gcgggcacga
     3241 gatcgggcgg gcccaagggg tgcaggcgct ggccgccggc gtcgaaccgg acgtcgacat
     3301 gaacccgatc ctgctcaagc cgtcgagcga ccggaccagc caggtcgtgg tgctcgggca
     3361 gccggtcggc cacctcgacg ccgccgccta ccacgccgcc aagcccggcc tgcggagcac
     3421 cgtcgtcgcc gccctcgagc ggctccgggc ccgcttcgac gtcgtgctgc tcgagggggc
     3481 ggggagcccg gcggagatca acctgctcga cggtgacctc gtcaacctgt ggctggcccg
     3541 caccgccggg atccccgccg tggtcgtcgg cgacatcgac cggggcggcg tcttcgccac
     3601 gctgttcggc accgttacgc tgctgcccga cgacctccgc aactgcgtca aagcctttgt
     3661 ggtgaacaag ttccggggcg acccggcgct gctcgagccg gggctggccg aactccgggc
     3721 ccgcaccggc gttcccacga tcggggtcct gccctgggtc gacggcctgc acctcgacgc
     3781 cgaggacagc ctggcgctgc gccggccgtg ggattccgac gagcccccgg gcgggccacc
     3841 ggcgggcgac gtcctcgacg tcgccgtcgt ccgctttccc cggatctcca acttcaccga
     3901 cctcgacgcc ctggcgctcg agcccggcgt cggggtccgc tacgtcaccc atgccgccgg
     3961 gctcggggcg ccggacctcg tgatccttcc cggtaccaag gccacggtgg ccgacctggc
     4021 gtggctgcgg gcccgggggc tcgacgccgc cctggccgcg ctggcgccgt ccgccaccgt
     4081 cctcgggatc tgcggcggct accagatgct cggccgctcg atcgacgacg ccgtcgagag
     4141 cggcgccggc gccgtcgccg gcctcggcgt cctcccggcg gtcacccgct tcgaggcgac
     4201 caagatcacc cgcccccgcc ggggtgtggc cctcggccag ccggtcaccg gctaccagat
     4261 ccaccacggc cgcagcgtct cggagtcgcc gtgggtcacc ctcgacgacc actggggccg
     4321 ccagcccgag ggcggcgccg acgacggcgg cgggcgggtg gccgccttcg gcaccagcct
     4381 ccacggcctc ttcgagtcgg acgggttccg ggccgccttc ctcgccgccg tggccgcccg
     4441 gcgccacaag cggttcacgg cgtcgggcct gtcgttcgcc gccgcccggg aggcgcagtt
     4501 cgaccgtctc gccgacctcg tggaggcgca cctcgacatg gccgccgtcg agagcctgat
     4561 cgccagcggc gctgccgccg ttcgggagcc ggtgtgatcc tcttcctctc caccgccgac
     4621 accgagatcc tcgccctgcg ggcggccgtc gagtcgctgc ccgacgggtt cccgcccgtc
     4681 cgggccgggt cgccggcaag gctgcaggag gcgccgccgc tcgacggcgt cgccgccgtc
     4741 gtcgtccgcc tcctcggcgg acgccgggcc tgggaggcgc ccttcgacgc cctggcccgg
     4801 gaatgccggc ggcgggacgt agcgctgctg gccttcggcg gcgaggcggc cctcgacccc
     4861 gagctgaccg ccgcctccac cgtggcggcg gcggtgatcg gcgaggcctt cccctacctg
     4921 ctccacggcg ggccggccaa caccgccaac ctcctgcgct tcgtggccga cgaggtcctc
     4981 ggcgcttcgc cgccctatgc ctacggcgcg gccgaacccg tgcccgacga agggatctac
     5041 cgccgcgggc ccgggctcga tccggacttc gacccggcgc ggccgaccgt cggcgtcgtc
     5101 ttctaccggg cgcacctcct ggccgggaac accgtcttcg tcgacgacct gtgcgccgcc
     5161 ctccgggagc agggcgccaa cgcgttggcc tgctggtgct actcgctccg gcccgacgag
     5221 cgcggcgacg tgccggtcgt cacccgcttc ctcgagggcc gggtcgacgc cgtcgtgacg
     5281 accgtgctgg ccatgggcca ggccggcccc gaagcggact cgtgggacgt gccggtgctg
     5341 gcccgcctcg acgtccccgt cgtccaggcc gtggccgcca ccaccagccg ggcggcctgg
     5401 gaggagcacg acgtcgggct ctccccgctc gacaccgcct ggtcggtggc gctgccggag
     5461 ttcgacgggc ggatcatctc ggtgccgttg tcgttcaagg agatcgtcga cgacggcgac
     5521 gatctcggcg tgcccgtcgt cgcctaccgg acggtgcccg accgggtcgc ccgcgtggcc
     5581 ggcacggcgg tgcggctggc ccggctgcgg cggaaaccca atgccgacaa gcggatcgcc
     5641 gtcgtcctct cggcctaccc gacgaagcgg gggcgcatcg gcaacgctgt cgggctcgac
     5701 acgcccgcct cggtcatcgg gctgcttcac gccttccgcg acgccggcta ccgggtggag
     5761 gggatcccgg ccgacgggga cgccctcatc gccgagctcg tcgaccgctt ctcctacgag
     5821 aa
//
LOCUS       DATGJT010000413         2806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1193126, whole genome shotgun sequence.
ACCESSION   DATGJT010000413 DATGJT010000000
VERSION     DATGJT010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1193126"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VKX24_07100"
     CDS             complement(<1..318)
                     /locus_tag="VKX24_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08287.1"
                     /translation="MGTTATERPQTRSKLARMAGIGPVSPVSILGGLLVGYATFGILL
                     AAAVALLQGRSSTFDLTQGWEKLGAGGGILIGVLLFFAYLLAGYMTGRMAWRQGVLHG
                     IGVF"
     gene            complement(412..2277)
                     /locus_tag="VKX24_07105"
     CDS             complement(412..2277)
                     /locus_tag="VKX24_07105"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08288.1"
                     /translation="MADVTTLGQDGVIGRGQADVARLRERNRQRRMQRSLAVFGPLSA
                     WLWFRQLTGNPVILGWPHLSGGLATMLPQIILVGMFGIVLIVPLAVAGKSPHVRFRPS
                     EIEIGFADVKGMDVVLEEVTRTLNLFLGFKTFREAMGGTPRRGILFEGPPGTGKTYMA
                     KALAKEAGVPFFYVSSSAFQSMYYGQTNRKIRAYFKELRKAARQEGGAVGFIEEIDAI
                     AASRAGMRMTGASADGLAASLNVSGTTVSRSQGREGVAGIVNELLIQLQSFDHPTRTE
                     KLHGFVVDRVNNWLPDHRQLSKRRSTPANVLIIGATNRADDLDPALLRPGRFDRSVHF
                     DLPSRSGRREIIDYYLDRKAHTPELDRGDRREALAAMTAGYSPVMIEHLFDEGLVWAL
                     RDERPAMSWADVQQAKFTEEIGLKQPVEYTEAEKRRIATHEGGHAVVAHLVSPERNLE
                     VLSIIKRRGALGLLAHSDAEERFTKTEDELKGLMAIAMGGMVAEELAFGGASTGPAGD
                     LSYATTLAAQMVGSFGMGGTLVSFDAVEAGPLAAGIVAKVLGNDDARKRVEVLLLEAK
                     ETARRLLAEHRHLIEALVAALLERNELVGDEITDVLERAGVRHAAGAAAGVELRS"
     gene            2347..>2806
                     /locus_tag="VKX24_07110"
     CDS             2347..>2806
                     /locus_tag="VKX24_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4395 family protein"
                     /protein_id="HLJ08289.1"
                     /translation="MSARSLPPHAWRAPVCSRHRQIRSAWRRFAPPVRPHPVTASPPP
                     LPRFDQGLLALALVTGFVFSEPLLIPVVGIMATVSAVRPEVSPVPRLIAGLVERRFGT
                     DAAETLRADGYPPPWRAAAALLAAILAVGTLVFLVGDSGIAWAFGLPAAGL"
BASE COUNT          370 a         1034 c          982 g          420 t
ORIGIN      
        1 gaacacgccg atgccgtgca ggacgccctg gcgccaggcc atccgtccgg tcatgtagcc
       61 ggccaggaga taggcgaaga acagcagtac gccgatgagg atgccgccgc ccgccccgag
      121 cttctcccag ccctgggtga ggtcgaacgt cgagctccgg ccctgcagca gcgccaccgc
      181 cgctgccagg aggatcccga aggtggcgta gccgaccagc aggccgccga gtatcgagac
      241 cggtgacacc ggcccgatcc cggccatccg ggccagcttc gagcgggtct gcggtctttc
      301 cgtggcggtg gtgcccatcg tcggcctccc agggtgatct cagtgcctct accggcgttg
      361 atgcccgccg gcgtcggcct tcaatcgccc cggaaggcgc aaaacgggcg tttacgatcg
      421 cagctccacc ccggccgccg ccccggcggc gtggcggacg ccggcccgct ccaggacgtc
      481 ggtgatctcg tcgccgacga gctcgttgcg ctccagcagt gccgccacca gcgcctcgat
      541 caggtgccgg tgctcggcca gcagccggcg ggccgtctcc ttggcctcca gcagcaggac
      601 ctcgacccgc ttgcgggcgt cgtcgttgcc gagcaccttg gccacgatgc ccgcggccaa
      661 cgggccggcc tcgacggcgt cgaacgacac cagcgtgccg cccatgccga aggagccgac
      721 catctgggcc gccagggtgg tggcgtagga caggtcgccc gccgggccgg tcgacgcccc
      781 gccgaaggcc agctcctcgg ccaccatgcc gcccatggcg atggccatga ggcccttcag
      841 ctcgtcctcg gtcttggtga agcgctcctc ggcgtcggaa tgggccagca gcccgagcgc
      901 tccccggcgc ttgatgatcg acagcacctc gaggttgcgc tccgggctca ccaggtgggc
      961 gacgacggcg tggccgccct cgtgggtggc gatgcggcgc ttctcggcct cggtgtactc
     1021 caccggctgc ttgaggccga tctcctcggt gaacttggcc tgctggacgt cggcccagga
     1081 catggccggc cgctcgtccc gcagcgccca cacgagcccc tcgtcgaaga ggtgctcgat
     1141 catcaccggc gagtagccgg cggtcatggc ggccagcgcc tcccggcgat cgccccggtc
     1201 gagctcgggg gtgtgggcct tgcggtcgag gtagtagtcg atgatctccc gccggcccga
     1261 ccggctcggg aggtcgaagt gcaccgaccg gtcgaaccgg cccggccgga gcagcgccgg
     1321 gtcgaggtcg tcggcccggt tggtggcgcc gatgatcagc acgttggccg gcgtcgagcg
     1381 gcgcttggac agctggcggt gatccggcag ccagttgttg acccggtcga cgacgaagcc
     1441 gtggagcttc tccgtcctcg tcgggtggtc gaagctctgc agctggatca gcagctcgtt
     1501 gacgatgccg gcgacgccct cccggccctg ggagcgcgaa acggtcgtgc cagacacatt
     1561 gagcgaagcg gcgagcccgt ccgccgaagc gccggtcatc cgcatgcccg cccgggaggc
     1621 ggcgatggcg tcgatctcct cgatgaaccc gacggcgccg ccctcctggc gggccgcctt
     1681 gcggagctcc ttgaagtagg cccggatctt ccggttcgtc tgtccgtagt acatcgactg
     1741 gaaggccgac gacgagacgt agaagaacgg caccccggcc tccttggcca gcgccttggc
     1801 catgtaggtc ttcccggtgc cgggcgggcc ctcgaagagg atgccccggc ggggcgtgcc
     1861 gcccatcgcc tcccggaagg tcttgaagcc caggaagagg ttgagggtgc gggtgacctc
     1921 ctcgaggacg acgtccatcc ccttcacgtc ggcgaagccg atctcgatct ccgacgggcg
     1981 gaagcgcacg tggggcgact tcccggccac ggccagggga acgatcagga caatgccgaa
     2041 catcccgacc aggatgatct ggggcagcat cgtggccaga ccgccggaca ggtgaggcca
     2101 gccgaggatg acgggattgc cggtcagctg gcggaaccac aaccaggccg acagcggccc
     2161 gaacacggcc agcgagcgct gcatgcgccg ctgccggttc cgctcccgca gccgggcgac
     2221 gtcggcctgg ccccgcccga tgacgccgtc ctgcccgagc gtggtcacat cggccattgg
     2281 ctacccttcc ttccctatga cggaccccgg ggtgagtggg cggccctgca gcgaggtctt
     2341 ctccagttgt cggctcgctc cctcccgccc cacgcctggc gcgcgccggt ttgctcccgc
     2401 caccggcaga tccgctccgc ctggcgccgg ttcgccccgc cggtccggcc ccacccggtg
     2461 acggcctcgc ctccccctct gccccgcttc gaccagggcc tgctggccct ggcgctcgtc
     2521 accggcttcg tcttctccga gccgctgctg atcccggtgg tggggatcat ggccacggtg
     2581 tcggcggtgc ggccggaggt gtcgcccgtc ccccgcctga tcgccgggct ggtcgagcgg
     2641 cgcttcggca ccgacgccgc cgagaccctg cgggccgacg gctacccgcc gccgtggcgg
     2701 gcggcggcgg cgctgctggc cgccatcctg gccgtcggca cgctcgtctt cctcgtcggc
     2761 gacagcggga tcgcctgggc cttcgggctg ccggcggcgg ggctgg
//
LOCUS       DATGJT010000414         2683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_987332, whole genome shotgun sequence.
ACCESSION   DATGJT010000414 DATGJT010000000
VERSION     DATGJT010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987332"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /gene="era"
                     /locus_tag="VKX24_07115"
     CDS             complement(<1..828)
                     /gene="era"
                     /locus_tag="VKX24_07115"
                     /inference="COORDINATES: protein motif:HMM:NF000908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HLJ08290.1"
                     /translation="MTFTSGIATLVGRPNVGKSTLLNQLVGTKVSIVSDRPQTTRNQV
                     RGVWNGPDAQVVFIDTPGIHKPRTELGRRLNQRSLETLLAVDVVCFLVDATAEIGAGD
                     RYIAGLLAEVATPVVLVVNKTDAARPEEILGHLAGAAGTLGDFAAYVPLSARTGDGAE
                     ALLGEITARLPEGPRYYPDGVVTDQPDTFLAAELLREKLLAVARDELPHSLAVTVEEI
                     EERPAEGDREALVILRAVVRVERDSQKGIVIGKGGAVIKEAGTAARKELEALLGTRVH
                     "
     gene            complement(825..2105)
                     /locus_tag="VKX24_07120"
     CDS             complement(825..2105)
                     /locus_tag="VKX24_07120"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HLJ08291.1"
                     /translation="MSNSDWLTVIAISILVITSAFFAMSETALVRMNRIRAMTLDEEG
                     RRGAKRLVGLLEEPENTLNLILLFLLICQLTAGTLVGVLVEGQFGAYGVLIGTVVEVI
                     VFFVIAEVAPKTYAVQYPERAALRLAGPLYWLTNFPPLKALSKVLIGVANVLLPGKGL
                     KKGPYTTEEDIRTMADVAADEMVIEREERRLIHSIFEFGDTVVREVMVPRPDMVGVEA
                     DATVDEALEKAIGAGYSRLPAYGEGPDDILGLVYLKDIIRRVRESDGAQTKLGDLVRP
                     AVFVPEQKKVAELLREMQKDKFHMAIVVDEYGGTAGLVTLEDLLEEIVGEIVDEYDVE
                     VPRVERLADGCLLVAGGTPIDEVNELLAIELPETDWDTVGGLMFNLLGHVPVEGEAVE
                     FQGFEFRAERVQGRRILTVRITPKESEPAESAAT"
     gene            complement(2107..2622)
                     /gene="ybeY"
                     /locus_tag="VKX24_07125"
     CDS             complement(2107..2622)
                     /gene="ybeY"
                     /locus_tag="VKX24_07125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HLJ08292.1"
                     /translation="MDPVEVFVADEQAEVSVDALRWVRLARMVLEEQGVRGDAELSML
                     FVDEKSMADLNERFLGRDGPTDVLAFPMDDELIESGRQPDQGGRGPGSPAEPSDAPIL
                     VGDVVICPKVAERQALDHNVAVDDEMSLLVVHGVLHLLGFDHEDDDEAAAMEKREREL
                     MARFRELERGQ"
BASE COUNT          385 a          981 c          909 g          408 t
ORIGIN      
        1 atgaacccgg gtgccgagga gcgcctcgag ctccttccgg gccgccgtcc ccgcctcctt
       61 gatcaccgcc ccgcccttgc cgatcacgat gcccttctgg gagtcgcgct ccacccgcac
      121 gacggcccgc aggatgacga gcgcctcccg atcgccctcg gcggggcgct cctcgatctc
      181 ctcgacggtg accgccagcg aatgcggcag ctcgtcccgg gccacggcca gcagcttctc
      241 ccggaggagc tcggcggcca ggaacgtgtc gggctggtcg gtcacgacgc cgtcggggta
      301 gtagcggggc ccttccggga gccgggcggt gatctcgccg aggagggcct cggcgccgtc
      361 gccggtgcgg gccgacagcg gaacgtaggc ggcgaagtca ccgagcgtgc cggcggcgcc
      421 cgccaggtgg ccgaggatct cctccggccg ggcggcgtcg gtcttgttga ccaccaggac
      481 gacgggcgtc gcaacctcgg ccaggagccc ggcgatgtag cggtcgccgg cgccgatctc
      541 cgcggtggcg tcgacgagga agcagacgac atccacggcc aggagcgtct ccagcgaccg
      601 ctggttcagg cgccggccga gctccgtccg gggcttgtgg atccccggag tgtcgatgaa
      661 cacgacctgg gcgtcggggc cgttccagac gccccggacc tggttgcggg tcgtctgcgg
      721 ccggtcggag acgatcgaga ccttggtgcc gaccagctgg ttgagcaggg tcgacttccc
      781 cacgttgggg cggcccacca acgtggcgat gccggaggtg aaggtcacgt ggcggcggac
      841 tccgccggct cggactcctt cggcgtgatg cgcacggtca ggatccgccg gccctggacc
      901 cgctcggccc ggaactcgaa gccctggaac tccacggcct ccccttcgac cggcacgtgg
      961 ccgaggaggt tgaacatcag gccgccgacg gtgtcccagt cggtctccgg gagctcgatg
     1021 gccagcagct cgttgacctc gtcgatcggg gtgccgccgg ccaccagcag gcagccgtcg
     1081 gccagccgct cgacccgggg cacctcgacg tcgtactcgt cgacgatctc cccgacgatc
     1141 tcctccagca ggtcctccag cgtcaccagg ccggcggtgc cgccgtactc gtcgacgacg
     1201 atggccatgt ggaacttgtc cttctgcatc tcccgcagca gctcggccac cttcttctgc
     1261 tccggcacga agacggccgg ccgcacgagg tcgccgagct tggtctgggc gccgtcgctc
     1321 tcccgcaccc ggcggatgat gtctttcagg tagacgagcc cgaggatgtc gtcgggcccc
     1381 tcgccgtagg ccggcagccg ggagtagccg gcgccgatgg ccttctccag cgcctcgtcg
     1441 acggtggcat cggcctccac gccgaccatg tccggccggg gcaccatcac ctcccgcacc
     1501 acggtgtcgc cgaactcgaa gatcgagtgg atgaggcgcc gctcctcccg ctcgatgacc
     1561 atctcgtcgg cggccacgtc ggccatcgtg cggatgtcct cctcggtggt gtacgggccc
     1621 ttcttcaggc ccttgcccgg gaggaggacg ttggccacgc cgatcagcac cttcgacagc
     1681 gccttgagcg gggggaagtt ggtcagccag tagagcgggc cggcgaggcg cagcgcggcc
     1741 cgctccggat actggacggc gtaggtcttg ggcgccacct cggcgatgac gaagaagacg
     1801 atgacctcga ccaccgtgcc gatcaggacg ccgtaggccc cgaactggcc ctcgaccagg
     1861 acgccgacca gcgtcccggc cgtcagctgg cagatcagca ggaagagcag gatgaggttg
     1921 agggtgttct ccggctcctc cagcagcccc accagccgct tggcgccccg gcggccctcc
     1981 tcgtcgagcg tcatggcccg gatgcggttc atccgcacca gcgccgtctc cgacatggcg
     2041 aagaacgccg acgtgatcac caggatcgag atggcgatca ccgtcagcca gtcggagttc
     2101 gacacctcac tggcctcgct cgagctcccg gaaccgggcc atcagctccc gttccctctt
     2161 ctccatcgcc gccgcttcgt cgtcgtcctc gtggtcgaag cccagcaggt gcagcacgcc
     2221 gtggacgacg aggaggctca tctcgtcgtc gaccgccacg ttgtggtcca gcgcctgtcg
     2281 ttcggcgacc ttcgggcaga tcacgacgtc gccgacgagg atcggggcgt cggacggctc
     2341 ggccggcgac cccgggcccc gaccgccctg gtcgggctgg cggccgctct cgatcagctc
     2401 gtcgtccatg gggaaggcga ggacgtcggt cgggccgtcc cgccccagga agcgctcgtt
     2461 gagatcggcc atcgacttct cgtcgacgaa cagcatcgac agctcggcgt cgccccggac
     2521 cccctgttcc tccagcacca tgcgggccag ccgcacccag cgcagcgcgt cgaccgagac
     2581 ctccgcctgc tcgtcggcga cgaagacctc caccggatcc atcacctctg ctcgtgccgg
     2641 gagtaggcgt cgacgatgtc ggccacgatc cggtggcgga cga
//
LOCUS       DATGJT010000415         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1299888, whole genome shotgun sequence.
ACCESSION   DATGJT010000415 DATGJT010000000
VERSION     DATGJT010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1299888"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..721
                     /locus_tag="VKX24_07130"
     CDS             <1..721
                     /locus_tag="VKX24_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011014133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLJ08293.1"
                     /translation="IDDFLEKPEDPPGLPDDPDSSYVSMGNYVFSTDALIQSVTADAF
                     NDETNHDVGGDLIPRMVTAGVARVYDFASNVVPGATDRDRGYWRDVGTLDSYYAANMD
                     LISVTPIFNLYNRNWPIFSWNEPAPPAKFVFEDGQRASHAFNSMVCAGSIVSGGTVRR
                     SILSPEVVVESGALVEDSVLLHAVRVGEGAVVRRAIIDKNVVVPPGCCIGVDREIDRQ
                     RFTVSEGGVAVIGKNQRIAVS"
     gene            738..1916
                     /locus_tag="VKX24_07135"
     CDS             738..1916
                     /locus_tag="VKX24_07135"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF033740.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarP family serine protease"
                     /protein_id="HLJ08294.1"
                     /translation="MNLVDLIIIVAAAASAAHGYFRGAAIGICSIAGFCGGLLLGAYL
                     SPFVIDRLHNPVDRTVAAVVIVFGLAIVLGGIGERLGAKARTALRVLLLGPVDSILGA
                     ILAVVTSLLAVWLMAGILFALGDVPSLTRPVAQSAIVKALVRTLPAAPSVLAHVGAVL
                     EPTGLPQVFSGLEPALAQPLPTPADPEVAAAEAAGENSTLKVQGVGCGGIKSGSGWVV
                     APDYVVTNAHVVSGISLPEVYDRTGRRHANVTVVLYDPEVDLAVLYVPGLDDKPLPLD
                     AASAPRGTAGAVLGYPGGGPFTVVPAALLSSLSAVDRDIYGRNATTRSVYELQADVRP
                     GNSGGPFISSTGYVIGVVFSASTTYPNVGYALTGAEVAPDISKAIHLTSGVSTQTCAG
                     "
     gene            2006..>2286
                     /locus_tag="VKX24_07140"
     CDS             2006..>2286
                     /locus_tag="VKX24_07140"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HLJ08295.1"
                     /translation="MPGQRNGVAPALNDAVLDELSASLGPAGERVLSQIIHLFLDAVP
                     KTMAGIRMAAEARDPRGLARSAHRLRGDAATIGATPLESLCAEAELHGWA"
BASE COUNT          313 a          833 c          790 g          350 t
ORIGIN      
        1 gatcgacgac ttcctggaga agccggagga tccgccgggc ctgcccgacg accccgactc
       61 gtcgtacgtc tccatgggca actacgtgtt ctcgaccgac gcactgatcc agtcggtgac
      121 cgccgacgcg ttcaacgacg agaccaacca cgacgtcggt ggtgacctga tcccgcggat
      181 ggtgaccgcc ggcgtcgccc gggtctacga cttcgccagc aacgtcgtcc ccggggcgac
      241 cgaccgggac cgggggtact ggcgcgacgt cggtaccctg gacagctact acgccgcgaa
      301 catggacctg atctcggtga cgcccatctt caacctgtac aaccggaact ggccgatctt
      361 ctcctggaac gagccggccc cgcccgccaa gttcgtgttc gaggacgggc agcgggcgag
      421 ccacgccttc aattcgatgg tctgcgccgg gtcgatcgtg tccggtggca ccgtgcgccg
      481 ctcgatcctg tcgccggagg tcgtggtcga atcgggcgcc ctggtcgagg actcggtgct
      541 gctgcacgcg gtgcgcgtcg gggagggggc ggtcgtgcgc cgggcgatca tcgacaagaa
      601 cgtcgtcgtc ccccccggtt gctgcatcgg cgtcgaccgc gagatcgacc ggcagcggtt
      661 cacggtgtcc gagggcgggg tggccgtcat cggcaagaac cagcgaatcg cggtctcctg
      721 atcccctccg gcggtctatg aacctcgtcg acctcatcat catcgttgcg gcagcagcct
      781 cggcggcaca cggctacttc cgcggagcgg cgatcggcat ctgctcgatc gccgggttct
      841 gcggcggcct gctcctcggc gcctacctca gcccgttcgt catcgaccgg ctgcacaacc
      901 cggtcgaccg cacggtcgcc gccgtggtga tcgtcttcgg actggcgatc gtgctggggg
      961 ggatcggcga acggctcggg gcgaaagccc gcaccgccct gcgggtgctg ctgctcgggc
     1021 cggtcgactc gatcctgggg gcgatcctgg ccgtcgtgac ctcgctgctg gcggtctggc
     1081 tgatggccgg catcctgttc gccctcggcg acgtgccctc gctcactcgg ccggtcgccc
     1141 agtcggccat cgtcaaggcg ctggtgcgga ccctccccgc cgccccctcg gtgctggccc
     1201 acgtcggggc ggtgctggag ccgaccggcc tgccccaggt gttcagcggg ctcgagccgg
     1261 cgctcgccca gccgctgccg accccggccg acccggaggt cgcggcggcc gaggccgccg
     1321 gggagaactc gaccctcaag gtccaggggg tcggctgcgg cgggatcaag agcgggtcgg
     1381 ggtgggtggt cgcccccgat tacgtcgtca ccaacgccca tgtggtgtcc ggcatctccc
     1441 ttcccgaggt ctacgaccgc accggccggc gccacgccaa cgtcaccgtc gtgctctacg
     1501 acccggaggt cgacctggcg gtgctctacg tccccggcct tgacgacaag ccgctgcccc
     1561 tcgacgccgc cagcgccccg cgaggcaccg ccggcgccgt gctcgggtac cccggcggag
     1621 ggccgttcac ggtcgtcccg gcggcgctgc tcagcagcct ttcggcggtc gaccgggaca
     1681 tctacgggcg caacgccacg acccggagcg tctacgagct gcaggccgac gtccggcccg
     1741 gcaactccgg cggcccgttc atctcgtcga ccggctacgt gatcggggtg gtgttctcgg
     1801 cgtcgaccac ctacccgaac gtcggctacg cgctgaccgg agccgaggtc gccccggaca
     1861 tcagcaaggc catccacctc acctccggcg tcagcacgca gacctgcgcc ggatagctcc
     1921 cggaaaatga tcagaaatag ctatttccgg cgcgccgggc gcgggctacc gttggggagc
     1981 gcacactgcg cgatgggggt tgcgcatgcc tggacagcgg aacggagtgg cgccggcgct
     2041 caatgacgcc gtgctcgacg agctgagcgc cagcctgggc ccggccgggg agcgggtgct
     2101 gtcccagatc atccacctgt tcctcgacgc ggtgccgaag accatggccg gcatccggat
     2161 ggcagccgag gcccgggacc cccgcgggct tgcccgctcg gcacaccgcc tccgcggcga
     2221 cgcggcgacg atcggggcca ctcccctgga gagcctgtgc gccgaggccg agctgcacgg
     2281 ctgggc
//
LOCUS       DATGJT010000416         2232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_781571, whole genome shotgun sequence.
ACCESSION   DATGJT010000416 DATGJT010000000
VERSION     DATGJT010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_781571"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..902)
                     /locus_tag="VKX24_07145"
     CDS             complement(<1..902)
                     /locus_tag="VKX24_07145"
                     /inference="COORDINATES: protein motif:HMM:NF025022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HLJ08296.1"
                     /translation="MTTTEPRHPGLPDSGQTDGGVGTTVVLDTCVLLADPDSLYAFGD
                     ADIVIPLTVIEELDGHKSRLDDVGRAARAVVRDLERLRVDSGGDFREPVALPTGGTLR
                     VAINGLVLETIAAHGLNPDKADNRILAAALGLTREGVGRVKIVSADAALRIKASQLGL
                     AAEDYHRASKGRDALAVRGWHRVETSRELIDALYATGAVAIPAAFDGIVTNEYVVLSA
                     GSSSALARVFNDRLHLVERRRQVWGLTPRSKEQIFALDLLMDPDVAVVALSGFAGTGK
                     TILALAAGLEQVMEPGVDRRSRYD"
     gene            1048..1806
                     /locus_tag="VKX24_07150"
     CDS             1048..1806
                     /locus_tag="VKX24_07150"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HLJ08297.1"
                     /translation="MSGRLWRLVAPIVLVGALIGPVTARPAAASTSRVVAANLQFTPA
                     RLQVFVGDTVVWDAGDDDHTVTARDGSFDSSDRGLMAAGDEFRWRFRVPGTFPYFCRV
                     HGDRGMQGVIVVLDASASTTATTARAVPVSAAATTSTTLAGPTTTAPATTTTTRPLAT
                     SSTTSIAMATPSTTPVGVPVDPQAPPAVNPAAPVLGGSAAPDQGLSASDAASRRSGGP
                     STAAVAGGAALGALVLLGGVGGGLRRRARRRRRG"
     gene            complement(1772..>2232)
                     /locus_tag="VKX24_07155"
     CDS             complement(1772..>2232)
                     /locus_tag="VKX24_07155"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HLJ08298.1"
                     /translation="AARLPRYRHPIPAGSPLGARALVVVCAERGGLYANLSRFVHFDP
                     PDAELAGKLEACQGILARLRDATKPGRTLGDVFEDCRRFYAEAGVPDGWRHHHQGGLT
                     GYRSREVIATPGGATPISEGQAFAWNPSLPGAKAEETFLLTPAGADVLCA"
BASE COUNT          273 a          796 c          860 g          303 t
ORIGIN      
        1 ttgtcgtagc gggagcggcg gtcgacgccg ggctccatca cttgctcgag gccggcggcg
       61 agggccagga tcgtctttcc cgtcccggcg aagcccgata acgccacgac ggccacgtcg
      121 gggtccatca gcaggtcgag ggcgaagatc tgctccttgg accggggggt gagcccccac
      181 acctgccggc ggcgctcgac gaggtggagg cggtcgttga acacccgggc cagcgccgaa
      241 gacgacccgg cgctgaggac gacgtactcg ttggtcacga tcccgtcgaa ggccgccggg
      301 atggccacgg cgccggtggc gtagagggcg tcgatcagct cccggctggt ctcgacccgg
      361 tgccagcccc ggacagcgag ggcgtcgcgc cccttgctgg cccggtggta gtcctcggcc
      421 gccaggccga gctgcgaggc cttgatgcgc agggcggcgt cggccgagac gatcttgacc
      481 cgtccgactc cctcccgggt gagcccgagg gcggcggcca ggatccggtt gtcggccttg
      541 tcggggttga gcccgtgggc ggcgatcgtc tcgagcacga ggccgttgat ggccacccgc
      601 agcgtcccgc cggtggggag ggcgacgggc tcccggaagt ccccgccgct gtcgacgcgg
      661 agccgctcca ggtcccgcac gaccgcccgg gccgcccggc cgacgtcgtc gagccggctc
      721 ttgtgcccgt ccagctcctc gatgaccgtc agcgggatga ctatatcggc gtcgccgaag
      781 gcgtagaggg agtcggggtc ggccaggagg acgcaggtgt cgaggacgac ggtcgtgccg
      841 acacctccgt ccgtctgccc ggagtcgggg aggccagggt gccgtggttc cgtcgtggtc
      901 acgtgtgggt cctcccgatg ggggacgggc cgtttccaca ctcattcgac gccggtcgcg
      961 tcatctccct tcacggtacg ggctgcccgg ccccggaagg gggacctgcc gtgagattcg
     1021 ggtcgctctc gggtagaacg gtcggcgatg agcgggcggc tctggcgcct cgtggcgcca
     1081 atcgtgctgg tcggggccct gatcgggccg gtgacggcgc gccccgcggc ggcgtccacc
     1141 agccgggtgg tcgccgccaa cctgcagttc accccggcgc ggctccaggt tttcgtgggg
     1201 gacaccgtgg tgtgggacgc cggcgacgac gaccacacgg tcacggcccg cgacgggagc
     1261 ttcgactcca gcgaccgcgg cctgatggcc gccggcgacg agttccgctg gcggttccgg
     1321 gtgccgggga cgtttcccta cttctgccgc gtccacggcg accgggggat gcagggggtg
     1381 atcgtcgtcc tcgacgcgtc ggcgtccacc acggcgacga ccgcccgggc ggtgccggtg
     1441 agcgccgccg ctacgacctc gacgaccctg gccggcccga ccaccacggc tccggccacc
     1501 acgacgacga cccgcccgct ggccacgagc tcgaccacca gcatcgccat ggccacaccg
     1561 agcacgacgc cggtcggggt accggtcgat ccccaggcgc caccggcggt gaaccccgcc
     1621 gccccggtcc tcggtggttc cgccgccccg gatcagggcc tctcggcgtc ggacgccgct
     1681 tcccggcgct ccggcggccc gagtacggcg gcggtggccg ggggcgcggc cctgggggcc
     1741 ctcgtcctcc tcggaggcgt ggggggcggg ctcaggcgca gagcacgtcg gcgccggcgg
     1801 gggtgagcag gaacgtctcc tcggccttgg cgccgggcag cgaggggttc caggcgaagg
     1861 cctggccctc gctgatcggc gtcgcgcccc cgggcgtcgc gatgacctcc cgggagcggt
     1921 acccggtgag gccgccctgg tggtggtggc gccagccgtc ggggacgccg gcctcggcgt
     1981 agaaccgccg gcaatcctcg aagacgtcgc cgagcgtgcg accgggcttc gtggcgtccc
     2041 gcagccgggc caggatccct tggcaggcct cgagtttccc ggcgagttcg gcatccgggg
     2101 gatcgaagtg gacgaagcgc gacaggttgg cgtacaggcc gccccgctcg gcgcagacga
     2161 cgacgagggc ccgggcaccc agcggcgacc cggctgggat cgggtggcgg tagcggggca
     2221 gccgggccgc cc
//
LOCUS       DATGJT010000417         4003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_159631, whole genome shotgun sequence.
ACCESSION   DATGJT010000417 DATGJT010000000
VERSION     DATGJT010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159631"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VKX24_07160"
     CDS             complement(<1..669)
                     /locus_tag="VKX24_07160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08299.1"
                     /translation="MSARGGSIAAADPNGSADWGLDAFNLGPDALVLVGFSLNVLDRV
                     SGALPAGSVLVIEEPDIIEKRRVTELAARFPAVGDILPWPYQDLTALHRLLAGEPRLG
                     RARAVVPGVEYAVGPASVLASALGRPGAGLRAGAAYRDKYELRLLAASAGIANPEFAL
                     ASGPADVEAFMRRVARPCVLKPTARQASFGVRRLASPDDVAEAWAYATGADEGDAAPD
                     RGVPS"
     gene            complement(666..1877)
                     /locus_tag="VKX24_07165"
     CDS             complement(666..1877)
                     /locus_tag="VKX24_07165"
                     /inference="COORDINATES: protein motif:HMM:NF024925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HLJ08300.1"
                     /translation="MLVIGGRIETVAKCREAGAKVIYLQHPHRFTADHVPLVHAALLA
                     DFTDWAVTRPLARSAREAFAISGVATLTEPALETAGRVTDLLGLPGNGYAVHRLLRDK
                     LAMRRRQAEAGVGPVAAAAVVERRSLAQFAEAHGYPFIVKPADGVASMGVRKVAGPSD
                     LAAAWRHIEQVRSEPLSAATFGTVSVDTFLAEEYLDGPEYSVEAFTFHGRHVVLAVTE
                     KLTLPNFLEIGHAVPARLTEPVRQAVVAAATAFLDCIGVGEGPSHTEIRLTPAGPRVV
                     ESHTRPGGDRIIELVEAAYGIDLERYTVSWPVDLVAELDQAPAPRQAAATRFVLAEPG
                     TVERVDGLEAVRAEPDVVLADLNLRPGDEVRPLAWSWDRPGQVVVTAPTTERAVARAE
                     ELAGRIRIVTR"
     gene            complement(1973..3049)
                     /locus_tag="VKX24_07170"
     CDS             complement(1973..3049)
                     /locus_tag="VKX24_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003947935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HLJ08301.1"
                     /translation="MTPPAEPRYADPPYADPPYAWMNGGIVAWDDCLLHGRSQGAFWG
                     ANVFEGVRGYWSPGTDQLRLFRLDDHLRRLRQSMRALRLAHRITDSELVDACCQLCRA
                     NEFREDIHLVIVAYFGRGTGWDTLGVTDDTGIHITALPRPRAPGYAGGLSVGIASWRR
                     ISDDTIPPRIKSGANYANSRLAHQEAVRHGYDTALILNRGGTVAESPGACVVMVREGA
                     VVTSPATSGALEGITVATAAELARRHLGLTLTRREIDRTELYAADELFLCGTLAEIAP
                     VTAVDGIPVGSGSPGPVTRKLQALYEHAVRHGAGYEGWLTPVLTPVPAAGADPAAEPA
                     AVQPAGVRSAAGTPAGVQPAAVGR"
     gene            complement(3046..>4003)
                     /locus_tag="VKX24_07175"
     CDS             complement(3046..>4003)
                     /locus_tag="VKX24_07175"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HLJ08302.1"
                     /translation="DGERATGQLERRIRAVIGDVDYEIDWLSTYRFHQRVVDRFRVGN
                     VFFAGDAAHALPPYGARGMNSGIQDADNLAWKLAAVIGGRATDALLDSYHDERHAAAG
                     ENLAVSEATIRFMVPATRRARLARNTLLRLAPGVKGLRRRVNSGRMAEPFTYSMSPIV
                     DPADAGGLVGAFAPDGLVSARGGARRLRELLGQGFVVLHAGTDPDAARQFAEEVVAQN
                     LPLRLLTLLPSGADADALPAESGALHDASGLLGGYAPGGEARWYLIRPDGHIAASRHP
                     AEVDQLPAIFLRCSGSVDASPRAYPVAPLPRDPATAGEGARP"
BASE COUNT          507 a         1440 c         1560 g          496 t
ORIGIN      
        1 cgacgggacg ccgcggtccg gcgcggcgtc accctcgtcg gcgccggtgg cgtaggccca
       61 ggcttcggcg acgtcgtcgg gcgaggccag acggcgcacc ccgaagctgg cctgccgggc
      121 ggtcggcttg agcacgcacg gccgtgccac ccggcgcatg aacgcctcga cgtcggccgg
      181 gcccgatgcc agcgcgaact ccgggttggc gatcccggcg gaggcggcca gcaaccgcag
      241 ctcgtacttg tcccggtagg cggccccggc gcggagcccg gctcccggtc gcccgagcgc
      301 ggaggccagc acggaggccg ggccgacggc gtactcgacc ccgggcacaa ccgcccgggc
      361 gcggcccagc cggggctccc cggccagcag ccggtgcagt gcggtcaaat cctggtaggg
      421 ccaggggagg atgtcgccga cggccgggaa gcgggcggcc agctcggtga cccggcgctt
      481 ctcgatgatg tccggctcct cgatcaccag gacgctgccg gccggcagcg ctccgctgac
      541 ccggtccagg acgttgaggc tgaacccgac cagcacgagg gcatccggcc cgaggttaaa
      601 ggcgtcgagg ccccagtccg cagacccgtt gggatctgcc gcggcgatgg agccgccccg
      661 agcgctcaac gggtcacgat ccggatccgc ccggcgagtt cctccgccct ggcgacggcc
      721 cgctcggtgg tcggggcggt cacgaccacc tggccggggc gatcccagct ccatgccagg
      781 gggcggacct cgtcgccggg gcgcagattc aggtcggcca ggacgacgtc gggctcggcc
      841 cgcaccgcct cgaggccgtc gacccgctcg acggttccgg gctcagccag gacgaaccgg
      901 gtcgccgccg cctggcgcgg ggccggagcc tggtcgagct cggcgaccag gtcgaccggc
      961 cagctgaccg tgtaccgctc cagatcgatg ccgtaggcgg cctcgacgag ttcgatgatg
     1021 cggtcgccgc ccggccgggt gtgcgactcg acgacccgcg gccccgccgg ggtgagccgt
     1081 atctcggtgt gcgacggccc ttcgccgacg ccgatgcagt cgaggaacgc cgtcgccgcg
     1141 gcgacgaccg cctggcggac cggctcggtc agccgggcag ggacggcgtg gccgatctcg
     1201 aggaagttcg ggagggtgag tttctcggtg accgccagca cgacatggcg gccgtggaag
     1261 gtgaacgcct cgacgctgta ctcgggcccg tcgaggtact cctcggcaag gaaggtgtcg
     1321 acgctcacgg tgccgaacgt cgccgcgctc aggggctcgc tccggacctg ttcgatgtgg
     1381 cgccaggcgg ccgccagatc ggacggcccg gcgaccttgc gcacccccat cgaggcgacg
     1441 ccgtcggcgg gcttcacgat gaacgggtag ccgtgtgcct cggcgaattg ggccagcgag
     1501 cggcgctcca cgaccgccgc cgcggcgacc gggccgacgc cggcctcggc ctgccggcgg
     1561 cgcatcgcca gcttgtcccg aagcaggcgg tggacggcgt agccattgcc gggcaggccc
     1621 agcaggtcgg tgacccggcc ggcggtctcg agcgccggtt cggtcagcgt ggccacgccg
     1681 ctgatcgcga acgcctcccg cgccgagcgg gccagcgggc gggtgaccgc ccagtcggtg
     1741 aagtcggcca gcagcgcggc gtgcacaagc gggacgtggt ctgcggtgaa gcggtgcggg
     1801 tgctggaggt agatcacctt cgcaccggcc tcccggcact tggccaccgt ctcgatgcgc
     1861 ccgccgatca ccagcatcgc cggggagcgc cgctcgagcg gggctgccgc tggggccgct
     1921 ggtccgggcc cggctcccgg ggttggcgcg ggcccgaccg cgctgagcga ggtcaccggc
     1981 cgaccgccgc cggctggacg ccagccggtg tgcccgccgc cgaccggacg cccgccggct
     2041 ggaccgccgc cggctcggcc gccgggtcgg cccccgccgc cggcaccggg gtcagcacag
     2101 gggtcagcca gccctcgtag ccggcgccgt gccggacggc gtgctcgtag agcgcctgga
     2161 gcttgcgggt gaccggcccc ggcgatccgc ttcccaccgg gatgccgtcg accgcagtga
     2221 ccggggcgat ctcggccagg gtcccgcaca ggaacagctc gtcggcggcg tagagctcgg
     2281 tccggtcgat ctcccgccgg gtgagggtta ggccgaggtg ccggcgggcc agttcggcgg
     2341 cggtggcgac cgtgatcccc tcgagggcgc cgctggtggc gggcgacgtg acgacggctc
     2401 cctcccggac catgaccacg caggcgccgg gggattccgc cacggtgcct ccccggttca
     2461 ggatcagcgc ggtgtcgtag ccgtgccgca ccgcttcctg gtgggcgagg cggctgttgg
     2521 catagttggc cccgctcttg atgcgcggcg ggatcgtgtc gtcggagatc cgccgccagg
     2581 aggcgatccc gaccgagagc ccgccggcgt acccaggagc acgggggcgg ggcagggcgg
     2641 tgatgtggat gccggtgtcg tcggtcacgc cgagggtgtc ccagccggtg ccccgcccga
     2701 agtaggcgac gatcacgagg tggatgtcct cgcggaactc gttggcccgg cacagctggc
     2761 agcaggcgtc gaccagctcc gagtcggtga tccggtgggc gaggcgcagc gcgcgcatcg
     2821 actggcgcag ccggcgcagg tgatcgtcga ggcggaacag ccgcaactgg tcggtccccg
     2881 gggaccagta cccccggacc ccctcgaaga cgttggcgcc ccagaacgcc ccctggctgc
     2941 gcccgtggag caggcagtcg tcccaggcca cgatgccgcc gttcatccag gcgtacggag
     3001 ggtcggcgta cggagggtcg gcgtaccggg gctcggccgg gggggtcacg ggcgggcccc
     3061 ttcgccggcg gtggcgggat cccgcgggag cggggcgacc gggtacgccc ggggggaggc
     3121 gtcgaccgat ccggagcagc gcaggaagat cgccggaagc tggtcgacct cggccgggtg
     3181 gcggctggcg gcgatgtggc cgtcgggccg gatcaggtac cagcgggcct ctccgcccgg
     3241 cgcgtagccg cccagcagcc cggaggcgtc gtggagggcg ccactctcgg ccgggagggc
     3301 gtcggcgtcg gcgccggagg gaagcagcgt cagcagcctg agcggcaggt tctgggcgac
     3361 gacctcctcg gcgaactgcc gggcagcgtc cgggtcggtt ccggcgtgca ggacgacgaa
     3421 gccctggccc agcaactcgc ggagccggcg ggccccgccc cgggccgaca ccagcccgtc
     3481 gggggcgaac gctccgacca ggccaccggc atcggcgggg tcgacgatcg gcgacatcga
     3541 gtaggtgaac ggttcggcca tccgcccgct gttcacccgg cggcggagcc ccttgacccc
     3601 gggcgccagg cggagcagcg tgttgcgggc cagccgcgcc cggcgggtgg ccgggaccat
     3661 gaaccggatc gtcgcctcgc tgacggccag gttctcgccg gcggcggcgt ggcgctcgtc
     3721 gtggtagctg tccagcaggg cgtcggtcgc ccggccgccg atgaccgcgg cgagcttcca
     3781 cgccaggttg tcggcgtcct ggatcccgct gttcatcccg cgggcgccgt agggcgggag
     3841 ggcgtgggcg gcgtcgccgg cgaagaacac attgcccacc cggaaccggt cgacgacccg
     3901 ctggtggaac cggtaggtgc tcagccagtc gatctcgtag tcgacgtcgc cgatcaccgc
     3961 cctgatccgg cgctccagct gcccggtcgc ccgctcgccg tcg
//
LOCUS       DATGJT010000418         2440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1403928, whole genome shotgun sequence.
ACCESSION   DATGJT010000418 DATGJT010000000
VERSION     DATGJT010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403928"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VKX24_07180"
     CDS             complement(<1..392)
                     /locus_tag="VKX24_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020509236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HLJ08303.1"
                     /translation="MPPGDDLPPIGCDFAPALDAARRGDDRALAALWRELQPALLRYL
                     RTVDAGAAEDIASDTWLEVTRRLDRFSGTERDFRGWLFTIARHRLIDARRRAARHRTA
                     PVAWIPERPGRDDPAADVLTCLSTEASIR"
     gene            complement(499..2058)
                     /gene="dacB"
                     /locus_tag="VKX24_07185"
     CDS             complement(499..2058)
                     /gene="dacB"
                     /locus_tag="VKX24_07185"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HLJ08304.1"
                     /translation="MWADPTSPPRRLRPAVVVAALLAPVLGTAFAPGPLGFLGAAGRP
                     PGPLVEHSYVAGAAGGTAQHLIPAPGDRGPSGPGAVPPVPATAAQGSPGAPPAPGPAA
                     PDAAPAPAAPGPAAAGAGTGADAPDPPVPPAAAALAAVIDAHLADDRLGGTTVGLSVW
                     VDGLGEVSRHGDLPLTPASNEKLLTAMGVLSLLPQTDTLVTEVRATGPQDGGALDGDL
                     VLVGGGDPTLQARGPHSLEDLAAAVKARGIDEVRGRLVGDESRYDHVRTAPGWLPEHV
                     PVFIGPLSALVVDRNQLRPDADYAADPVPGDLAYFRAALLRAGVRVHGPNAAAPAPAG
                     GAVLAALPSPPIGDLVGEMLNQSDNLVAELLVKEVGHRTGGGAPGSTAAGLAAITAAV
                     QRELGVPLAGVAADGSGLSRDDHRSPREWRTLLQAALARPWAERLVGSLPLAARTGTL
                     VRRFAGTAAEGNVRAKTGWIDEARSLSGYLTTTGGRHVVFSVIVNGTTPASPALNALD
                     GLVAAIAGDRS"
BASE COUNT          284 a          832 c         1055 g          269 t
ORIGIN      
        1 cggatcgacg cctccgtcga caagcacgtg aggacgtcgg cggcggggtc gtcgcggccg
       61 ggccgctccg ggatccaggc cacgggcgcc gtgcggtggc gggccgcccg gcggcgggcg
      121 tcgatcaggc ggtggcgggc gatggtgaac agccagccgc ggaagtcgcg ctccgtgccg
      181 gagaagcggt cgagccgccg ggtgacctcg agccaggtgt cggaggcgat gtcctcggcc
      241 gcgccggcgt ccacggtgcg gagataccgg agcagggcgg gctgcagctc ccgccacagg
      301 gcggccaggg cccggtcgtc gccccggcgg gcggcgtcga gggccggggc gaaatcgcaa
      361 ccgatcgggg ggagatcgtc gccggggggc acgttgtccg aattcgacac ccggccgggc
      421 gaccctgccc cgggtcacag gcttaacgcg actttgatcc gggcgcggcc gttccccggg
      481 cggcggcggg tctcctttct aggagcggtc tccggcgatg gccgccacca gcccgtcgag
      541 ggcgttgagg gccggcgagg cgggcgtcgt cccgttgacg atcacggaga agacgacgtg
      601 gcggccaccg gtggtggtga ggtaccccga cagcgaccgg gcctcgtcga tccagccggt
      661 cttggcccgg acgttgccct cggcggcggt gccggcgaag cggcggacca gcgtgccggt
      721 gcgggcggcc agcggaagcg agccgacgag gcgctccgcc caggggcggg ccagcgccgc
      781 ctgcagcagc gtccgccact cccgggggga acggtggtcg tcgcgggaca gccccgagcc
      841 gtcggccgcc accccggcca gcggaacgcc gagctcacgt tgcacggcgg cggtgatggc
      901 ggccagcccg gcggcggtcg agcccggggc gccgccgccc gtgcggtggc cgacctcctt
      961 gaccaggagc tcggcgacga ggttgtcgct ctggttgagc atctcgccga ccaggtcgcc
     1021 gatcggcggg gagggcaggg cggcgaggac ggcgccgccg gcgggggcgg gggcggcggc
     1081 gttcgggccg tggacccgga cgccggcccg gagcagcgcg gcccggaagt aggccaggtc
     1141 gccggggacg ggatcggcgg cgtagtcggc gtcggggcgg agctggttgc ggtcgacgac
     1201 gagagccgag agcgggccga tgaacaccgg cacgtgttcc ggcagccagc ccggagcggt
     1261 gcggacgtgg tcgtagcggc tctcgtcgcc gaccagacgt ccccggacct cgtcgatgcc
     1321 ccgggccttc acggcggcgg cgagatcctc gagggagtgc ggcccccggg cctggagcgt
     1381 ggggtcgccg ccgcccacga ggacgagatc gccgtcgagg gcgccgccgt cctgcgggcc
     1441 ggtggcgcgg acctcggtga ccagggtgtc ggtctggggg agcagcgaca gcacgcccat
     1501 cgccgtcagg agcttctcgt tggaggccgg ggtcagcggg aggtcgccgt ggcggctgac
     1561 ctcccccagg ccgtcgaccc acacggacaa tccgacggtg gtgccgccca gccggtcgtc
     1621 ggcgaggtgg gcgtcgatca cggcggcgag ggcggcggcg gcgggcggga cgggcgggtc
     1681 cggggcgtcg gccccagtgc cggcgccggc ggcggccggc cccggtgccg ccggcgccgg
     1741 agcggcgtcc ggagccgccg gcccgggagc gggcggggcg ccgggcgagc cttgcgccgc
     1801 tgtggccggg acgggcggca cggcccccgg tccggacggt ccccggtcac ccggtgcggg
     1861 gatgaggtgc tgggccgtcc cgccggcggc gccggcgacg taggagtgct cgaccagcgg
     1921 cccgggcggc cggcccgccg ccccgaggaa gccgagcggc cccggagcga acgccgtccc
     1981 caggacgggc gccagcaggg cggccacgac gacggccggt cggaggcggc gcggcggcga
     2041 tgtcggatcg gcccacatct tgcggccgga ctgtggcaga gcccgcgccg gaagtggtgg
     2101 atacccggcg gccggcccag cctctcaact ggcgttcctg accgtggcat gggagccgtg
     2161 aggaacgccg gttgggtcgg agcgccgggt gcgggcgttc cggcgttcct gaccgtggca
     2221 tgggagccgt gaggaacgcc ggttggttcg tcgcgcggcg gcgctagtgg tggtcgtggg
     2281 aggaggacgg cgggggcgtc gactccaccg gcggagggcc ctcgccccgc acggagggcg
     2341 gggcgtcggt gccggcggcc aggtcggtgc tctcgtagac gaaggccatc atgatgccca
     2401 tggcgtcggg gacgggccgg ggggcgtcgt agaccgactc
//
LOCUS       DATGJT010000419         3350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_987588, whole genome shotgun sequence.
ACCESSION   DATGJT010000419 DATGJT010000000
VERSION     DATGJT010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3350
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987588"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1346)
                     /locus_tag="VKX24_07190"
     CDS             complement(<1..1346)
                     /locus_tag="VKX24_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017981627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HLJ08305.1"
                     /translation="MTLRAEITEPVPSGGPHLDVLDRVQRRVLWLAASQVHHANKVRR
                     TGSGVKVGGHQASSASMVSIMSALYFSQLQAADRVSVKPHAAPVLHAINYLLGRLDRR
                     WLTELRTFGGLQSYPSRSKDPDPVDFSTGSVGIGATATIWSALAHRYVAGHYDVPPGG
                     RHIALVGDAELDEGAIWEALVDPLVERLGEVLWIIDVNRQSLDRVVPDIAVTRRARMF
                     AAAGWQTITVKYGRRLRALFARPGGVALRDRIDRMGNEEYQRLLRSPAAELRHRLPGG
                     GPEAAEIGRLVSDVGDAELAAAVADLGGHDLGDLLAAYRQAYAATDRPTVVFAYTIKA
                     WGLPTQGHPANHSALLTDDQWRELAATTGADPDDPWAAFPAGSAEAELCRATAARLGR
                     PPVEPMAPPDVPAELGRAHTGPASTQAAFGRFFLDVARAAPDVAGRIVTTSPDVASS"
     gene            1521..2426
                     /locus_tag="VKX24_07195"
     CDS             1521..2426
                     /locus_tag="VKX24_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012934176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HLJ08306.1"
                     /translation="MTYETLLYDVEDGIAVVTLNRADRHNTILPPMTDELQDAVERAG
                     EDPAVKVIILQGAGPSFCAGFDFSAGFHHWDDRLTTDGKWDPGKEFIATTSPTLGWVP
                     KFMSLWRSPKPVIAQIHGWCVGGGSEMSLCADIVVASEDARIGTPYSRMWGCHHAGMW
                     VYRLGLARAKELALTGRSLSGREAADIGLINKAVPFDQLQAEVWTTARQLMTIPLSQL
                     TAMKLVVNQAYENMGLHSTQLLGSMLDGMLRNTPEALDFIELAGREGVGAAVAIRDAP
                     FGDYSQAPPGGKPDPTHVIEPGKHP"
     gene            2468..>3350
                     /locus_tag="VKX24_07200"
     CDS             2468..>3350
                     /locus_tag="VKX24_07200"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020108121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLJ08307.1"
                     /translation="MSGPLQGLRVLDLTAMLAGPYATMLLADLGADVVKVESPAGDLI
                     RGVGPFREGAGEGRLGGYFQSVNRGKRSVVLDLKTADGRDRFLALAARADVVTENFSA
                     GVMERLGLGYGTLAEINPRLVYAAIRGFGDARTGESPYASWPAFDVVAQAMGGFLSVT
                     GTADGRPVKSGPGIGDLFPAVLLAVGVLAAVRHAEHTGEGQFLDVAMYDAVLSLTERI
                     VYQYSATGQVPAPQGNSHPLLCPFDIFPTADGWMAVAAPSDRHWAVIAERIGRPDMAA
                     DERYRTNAARLRHGPEVR"
BASE COUNT          450 a         1193 c         1262 g          445 t
ORIGIN      
        1 gacgaggcga cgtcggggct ggtggtcacg atgcgcccgg cgacgtcggg ggcggcccgg
       61 gcgacgtcga ggaagaagcg gccgaacgcc gcctgcgtcg acgccgggcc ggtgtgggcc
      121 cgcccgagct cggccgggac gtcgggcgga gccatcggtt cgacgggagg gcggccgagc
      181 cgggcggcgg tggcccggca gagctccgct tccgccgagc ccgccgggaa ggcggcccag
      241 gggtcgtcgg gatcggcgcc ggtggtggcg gccagctccc gccactggtc gtcggtcagc
      301 agcgccgagt ggttggccgg gtggccctgc gtcggcaggc cccaggcctt gatggtgtag
      361 gcgaagacga cggtcggccg gtcggtggcg gcgtaggcct ggcggtaggc ggcgaggaga
      421 tcgcccaggt cgtgcccgcc gaggtcggcg acggcggcgg cgagctcggc gtcgccgacg
      481 tcgctcacca gccgcccgat ctccgccgcc tccggtcccc cgccgggcag ccggtggcgc
      541 agctcggcgg cgggggagcg cagcagccgc tggtactcct cgttgcccat gcggtcgatc
      601 cggtcgcgca gcgccacgcc gcccgggcgg gcgaacaggg cgcgcaggcg gcgcccgtac
      661 ttcacggtga tcgtctgcca cccggcggcg gcgaacatcc gggcccggcg ggtgacggcg
      721 atgtcgggca cgacgcggtc cagcgactgc cggttgacgt cgatgatcca cagcacctcg
      781 ccgagccgtt ccacgagcgg gtcgaccagc gcctcccaga tggccccctc gtcgagctcg
      841 gcgtcgccga cgagggcgat gtggcggccg ccgggcggga cgtcgtagtg gccggcgacg
      901 tagcggtggg ccagcgcgct ccagatggtg gcggtggcgc cgatcccgac ggagccggtg
      961 gagaagtcga ccgggtcggg gtccttggag cggctcgggt agctctgcag gccgccgaag
     1021 gtgcgcagct cggtcagcca ccgccggtcg aggcggccga gcaaatagtt gatggcgtgg
     1081 agcaccgggg cggcgtgggg cttgaccgac acccggtcgg cggcctggag ctgcgagaag
     1141 tacagggccg acatgatgct gaccatcgac gccgacgacg cctggtggcc gccgaccttg
     1201 acccccgagc cggtgcggcg gaccttgttg gcgtggtgga cctggctggc ggccagccac
     1261 agcacccgcc gctggacccg gtccaggacg tcgaggtggg ggccgccgga ggggacgggc
     1321 tccgtgatct cggcccgcag tgtcatggcg tcagtcaacc ccgggatcgg ggcgtccgca
     1381 atcgcggccg tcccgccgcc ggttttcgac cgagatcggg atcctcgacc tcggcgattc
     1441 gtcgaggcgt tcggtatcgt gcccgaccgg tggcaggaag gcacggagat catgccgtgg
     1501 gacccggagg cgctggattc gtgacctacg aaacgctgct ctacgacgtc gaggacggga
     1561 tcgcggtggt gaccctcaac cgggccgacc gccacaacac gatcctcccg ccgatgaccg
     1621 acgagctgca ggacgccgtc gaacgggccg gggaggaccc ggcggtcaag gtgatcatcc
     1681 tgcagggggc cggcccgtcg ttctgcgccg gcttcgactt ctcggcgggg ttccaccact
     1741 gggacgaccg gctgaccacc gacgggaaat gggacccggg caaggagttc atcgccacga
     1801 cgtcccccac gctgggttgg gtgccgaagt tcatgtcgct gtggcgcagc cccaagccgg
     1861 tcatcgccca gatccacggc tggtgcgtcg gcggcgggag cgagatgtcg ctctgcgccg
     1921 acatcgtcgt cgcctcggag gacgcccgca tcggcacgcc gtactcccgc atgtggggct
     1981 gccaccacgc cggcatgtgg gtctaccgcc tcggtctggc ccgggccaag gaactggccc
     2041 tcaccggccg ctctctgtcg ggccgggagg ccgccgacat cgggctcatc aacaaggcgg
     2101 tgcccttcga tcagctccag gccgaggtgt ggaccaccgc ccggcagctc atgacgattc
     2161 cgctgtcgca gctcacggcc atgaagctgg tcgtcaacca ggcctacgag aacatggggc
     2221 tccacagcac gcagctgctc gggtcgatgc tcgacggcat gctccgcaac acccccgaag
     2281 cactcgattt catcgagctg gccggccggg aaggcgtcgg cgcggcggtg gcgatacgcg
     2341 acgccccgtt cggcgactac agccaggccc cgccgggagg caagcccgac ccgacccacg
     2401 tcatcgagcc ggggaagcac ccctgaccgc cgggctgccc ccgcccccga tgcctggcca
     2461 tgaagcggtg agcgggccgc tgcagggcct ccgggtgctc gacctgacgg ccatgctggc
     2521 cgggccctac gccacgatgc tgctcgccga cctcggcgcc gacgtcgtca aggtcgagtc
     2581 gcccgccggc gacctcatcc ggggggtcgg cccgttccgg gagggcgccg gcgagggccg
     2641 gctcggcggc tacttccagt cggtcaaccg gggcaagcgc agcgtcgtgc tcgacctcaa
     2701 gacggcggac gggcgggacc ggttcctggc gctggcggcc cgggccgacg tggtgacgga
     2761 gaacttctcc gccggggtga tggagcgcct cgggctgggc tacgggacgc tggccgagat
     2821 caacccccgc ctggtctacg ccgccatccg ggggttcggc gatgcccgca ccggtgagag
     2881 tccctacgcc tcgtggccgg ccttcgacgt cgtggcccag gccatgggcg gcttcctcag
     2941 cgtgaccggc accgccgacg gccggccggt caagtcgggg ccggggatcg gcgacctctt
     3001 tcccgccgtc ctgctggcgg tgggggtcct ggccgccgtc cgccacgccg agcacaccgg
     3061 cgagggccag ttcctcgacg tcgccatgta cgacgccgtg ctctcgctca ccgagcgcat
     3121 cgtctaccag tacagcgcca ccgggcaggt cccggcgccg cagggcaaca gccacccgct
     3181 gctctgcccg ttcgacatct ttcccacggc cgacgggtgg atggcggtgg ccgctccgtc
     3241 cgaccggcac tgggccgtca tcgccgagcg catcggccgg ccggacatgg cggccgacga
     3301 gcggtaccgc accaacgccg cccgcctgcg ccacggcccc gaggtccggg
//
LOCUS       DATGJT010000420         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_885349, whole genome shotgun sequence.
ACCESSION   DATGJT010000420 DATGJT010000000
VERSION     DATGJT010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_885349"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VKX24_07205"
     CDS             complement(<1..447)
                     /locus_tag="VKX24_07205"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HLJ08308.1"
                     /translation="MTSAEHREMRYDVHREYDGHDDPHAERVPGMDVIAAFDFDGTLT
                     RGGSVWKWLSSLVGRKVVAQAGASLATPLARAALVGGDAADEGKEALFVRTLAGLDAA
                     EVAERGRVFGPRHYQRHHRTEVRARIEWHRHQGHVLLLVSASPELYV"
     gene            complement(444..1277)
                     /locus_tag="VKX24_07210"
     CDS             complement(444..1277)
                     /locus_tag="VKX24_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013128508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HLJ08309.1"
                     /translation="MSEAVWKTVDISRDGPVIVVTIVRPERRNAVDSATASALLAAFS
                     AFEEDDSAHVAVLTGAGGTFCAGADLKALSAGDPRPVREEGPGPMGPTRLDLAKPVIA
                     AIEGHAVAGGLELALWCDLRVAATDAVLGVYCRRFGVPLVDGGTVRLPRLIGQSHALD
                     LVLTGRGVGGPEALRMGLVNRLTPPGRALHGAMALAREIAAFPPTCLRNDRRSVLWQW
                     GLPEPDALVLEARLGLDTIASGETSDGAGRFTAGAGRHGQGVGVTDSTLSAADTSGQM
                     R"
     gene            1474..2109
                     /locus_tag="VKX24_07215"
     CDS             1474..2109
                     /locus_tag="VKX24_07215"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0098869 - cellular oxidant detoxification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HLJ08310.1"
                     /translation="MALRLGDIAPDFTADTTQGTINFHEWLGDSWGILFSHPKDFTPV
                     CTTELGGFSKAKAEFDKRNTKLIGLSVDSVESHRSWDKDIEETQGQAVNFPVIGDPDR
                     KVADLYDMIHPNANDTLTVRSVFIIGPDKKVKLTLTYPASTGRNVDEVLRVLDSLQLT
                     AGYQVSTPVNWKDGDDVIIAPAISDEDAKVKFPKGFKTLKPYLRVTPQPNR"
BASE COUNT          350 a          830 c          746 g          296 t
ORIGIN      
        1 cacgtacagc tcgggcgacg ccgacaccag caggagcacg tggccctgat gccggtgcca
       61 ttcgatgcgc gcccgcacct cggtgcggtg gtggcgctga tagtgacggg ggccgaacac
      121 acgcccgcgc tcagccacct cggcggcgtc gaggcccgcc agcgtgcgca cgaacagcgc
      181 ctctttgccc tcgtcggcag cgtcgccgcc caccagggcg gcacgcgcca gcggggtggc
      241 cagcgacgcc cccgcctggg ccaccacctt gcggcccacg agggacgaca gccacttcca
      301 cacgctcccg ccgcgggtca aggtgccgtc gaagtcgaag gcggcgatca cgtccatgcc
      361 ggggacgcgc tcggcgtggg gatcgtcgtg cccgtcgtat tcacggtgca cgtcgtagcg
      421 catctcgcgg tgctcggcgc tggtcatcgc atctgccccg acgtgtcggc ggccgacaac
      481 gtcgagtcgg tgacgcccac gccctgaccg tggcgccccg cccccgccgt gaagcgcccc
      541 gccccgtcgc tggtctcgcc gctggcgatg gtgtcgaggc ccaggcgggc ctcgagcacc
      601 agggcatcgg gctcgggaag accccactgc cacagcaccg agcgccggtc gttgcgcagg
      661 cacgtgggcg gaaaggcggc gatctcccgg gccagggcca tggcaccgtg cagcgcccgt
      721 cccggcgggg tgagccggtt cacgaggccc atgcgcaggg cctcggggcc cccgacaccc
      781 cgtccggtga gcaccaggtc gagggcgtgg ctctggccga tgaggcgggg caggcgcacc
      841 gtgcccccgt cgaccagggg gacgccgaag cgtcggcagt agacgcccag cacggcgtcg
      901 gtggccgcca ctcgcaggtc gcaccacagg gcgagctcga ggccaccggc cacggcgtgc
      961 ccctcgatgg cggcgatcac cggcttggcc aggtccaggc gggtggggcc catgggaccg
     1021 gggccttcct cgcgcaccgg ccgggggtcc ccggcggaca gggccttcag gtcggccccc
     1081 gcgcagaagg tgcctcccgc cccggtgagc acggccacgt gggcgctgtc gtcctcctcg
     1141 aaggcgctga aggcggccag cagggcggac gccgtggccg agtccacggc gttgcgccgc
     1201 tcgggccgga cgatcgtcac cacgatcacg ggcccgtccc ggctgatgtc cacggtcttc
     1261 cagacggctt cgctcaccgc cggacccctt cccgtcctcg cacgccggtg gcaccccggt
     1321 cgcttcccat ggccttccat tctcccagag gagggcttcg gcaccacgct cttgaaagtc
     1381 gacccatcaa gtcgacaatt gggtctccgg ccggtacact cccgcgcgca cgccatcacc
     1441 gacgtcaccg cgagacgact gcaggaggaa aaaatggctc tccgcctggg ggacatcgcc
     1501 cccgacttca cggccgacac cacgcagggc accatcaact tccacgagtg gctgggcgac
     1561 tcatggggga tcctgttctc ccatcccaag gacttcactc cggtttgcac gactgagctc
     1621 ggggggttct ccaaggccaa ggccgaattc gacaagcgca acaccaagct catcggcctt
     1681 tcggtcgact cggttgagtc ccaccgttcc tgggacaagg acatcgagga gacccagggc
     1741 caggcggtga acttcccggt catcggggac ccggaccgca aggtggccga cctctacgac
     1801 atgatccacc cgaacgccaa cgacaccctg acggtgcgct cggtgttcat catcggcccg
     1861 gacaagaagg tcaagctgac cctgacctac ccggcctcga ccggccgcaa cgtcgacgag
     1921 gtcctccggg tgctggactc cctccagctc acggccggct accaggtctc cacgccggtg
     1981 aactggaagg acggcgacga cgtcatcatc gccccggcca tctccgacga ggacgccaag
     2041 gtcaagttcc cgaagggctt caagacgctc aagccctacc tccgggtcac gccccagccc
     2101 aaccgctgag gccggcgccc aggggcgcag cagggacagt cagcccgccg agggcccggg
     2161 cgcgcccggg cggaagacgg tggagcggta gtaggcgagc tcggcgatgc tctccttcac
     2221 gt
//
LOCUS       DATGJT010000421         2089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_468421, whole genome shotgun sequence.
ACCESSION   DATGJT010000421 DATGJT010000000
VERSION     DATGJT010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468421"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /locus_tag="VKX24_07220"
     CDS             complement(<1..800)
                     /locus_tag="VKX24_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLJ08311.1"
                     /translation="MARPDRRRESPWVMRTYSGHTSAKASNALYRSNLAKGQTGLSVA
                     FDLPTQTGYDPDAPEASGEVGKVGVPVVHLGHMAELMDGIPVGEMNTSMTINATASWL
                     LGLYIAHAEDTGVDPAVLQGTTQNDIVKEYLSRGTYIFPPAPSRRLIVDMIAYTVRHV
                     PKWNPINVCSYHLQEAGATPVQEIAYALATAIGVLDAVRDSGKVELTELPAVVGRISF
                     FVNAGIRFVEETCKMRAFVRLWDGICRQRYGVEDPKLRRFRYGVQVNSL"
     gene            complement(825..1679)
                     /locus_tag="VKX24_07225"
     CDS             complement(825..1679)
                     /locus_tag="VKX24_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012188758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HLJ08312.1"
                     /translation="MSIKRVGIVGSGIMGSGIAESAAVHGFEVVLRSRSQGTADGMLA
                     GLEKSLAKQVEKGKLAEADRDEALQRISAITDLGALSGCDLVIESVVEDLGVKKHLFS
                     ELDRICGEHTILATNTSTLPVVDMAMETGRPEKVCGIHFFNPAPVMTLVEIVRPITVS
                     EETIASARSFAEACEKQAVEVKDQAGFIVNALLFPYLNNAVRLFESGVATRDDIDAAM
                     KGGCGFPMGPFALLDLVGLDTSVAILDALYDEFRDPHFAAVPLLRRMVAAELLGRKSG
                     KGFYDYHR"
     gene            complement(1778..>2089)
                     /locus_tag="VKX24_07230"
     CDS             complement(1778..>2089)
                     /locus_tag="VKX24_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain dehydrogenase"
                     /protein_id="HLJ08313.1"
                     /translation="GVRVSVVCPGVIDTPLLDHPNPSDLPSPKSAPDGRALLTKSIGK
                     AYPPSALAEDVLEGVARNRPFIVSPRHARVPWLLYRLSPRLVVDSAPLVLRRVARLWS
                     H"
BASE COUNT          337 a          669 c          736 g          347 t
ORIGIN      
        1 agcgagttga cctgcacgcc gtagcggaag cggcgcagct tggggtcctc cacgccgtag
       61 cgctggcggc agatgccgtc ccacaggcgg acgaaggcgc gcatcttgca cgtctcctcc
      121 acgaagcgga tccccgcgtt cacgaagaag gagatgcgtc ccaccaccgc ggggagctcg
      181 gtcagctcca ccttgcccga gtcgcgcacc gcgtccagca cgccgatggc cgtggccagc
      241 gcgtaggcga tctcctgcac gggcgtggcg cctgcctcct gcaggtggta gctgcacacg
      301 ttgatggggt tccacttggg gacgtgtcgc accgtgtagg cgatcatgtc gacgatgagg
      361 cgccggctcg gagcgggcgg gaagatgtag gtgccgcgcg acaggtactc cttgacgatg
      421 tcgttctggg tggtgccctg gagcacggcg gggtcgacgc cggtgtcctc ggcgtgggcg
      481 atgtacaggc cgagcaacca cgaggccgtg gcgttgatgg tcatggaggt gttcatctcg
      541 ccgacgggga tgccgtccat gagctcggcc atgtgaccca ggtggacgac cggcacccct
      601 accttcccca cctcgccgga tgcctcgggc gcgtcggggt cgtacccggt ctgggtggga
      661 aggtcgaacg cgacggagag cccggtctgt cccttggcga ggttgctccg gtagagggcg
      721 ttggaggcct tggccgaggt gtgacccgag tacgttcgca tcacccacgg tgattcgcgt
      781 ctgcggtcgg gtcgcgccat gtcgctcacc cttcaagccc ggtctcagcg gtggtagtcg
      841 tagaaaccct tacccgattt cctgccgaga agctccgcag ccaccatacg cctgagcaac
      901 ggcaccgccg cgaagtgcgg gtctcggaac tcgtcgtaga gggcgtcgag gatcgcgacg
      961 ctcgtgtcca ggcccaccag gtcgagaagg gcgaacgggc ccatcgggaa cccgcatcct
     1021 cccttcatcg cggcgtcgat gtcgtcgcgc gtggcgacgc ccgactcgaa gaggcgcacc
     1081 gcgttgttca gatacgggaa caacagtgcg ttgacgatga acccggcctg gtccttcacc
     1141 tcgacggcct gcttctcgca ggcctctgcg aaggagcgtg ccgacgcgat cgtttcctcg
     1201 gagaccgtga tcgggcggac tatctccacg agggtcatga cgggggcggg attgaagaag
     1261 tggatgccgc agaccttctc cggacggcca gtctccatcg ccatgtcgac gacggggagc
     1321 gtggaggtgt tcgtcgcgag gatcgtgtgc tcgccgcaga tgcggtcgag ctcggagaag
     1381 aggtgcttct tcacgccgag gtcctcgacg acggactcga tcacgaggtc gcaacccgaa
     1441 agggcgccga gatcggtgat cgcagagatc ctctgcaggg cctcgtcgcg gtcggcctca
     1501 gccagcttcc ccttctcgac ctgtttggcc agggacttct cgagtcccgc cagcatcccg
     1561 tccgccgtcc cctgcgaccg ggaccgcaga accacctcga acccgtggac ggccgcactc
     1621 tcggctatgc ccgaacccat gatgccggag ccgacgattc ccacccgctt gatggacatg
     1681 aagagccatg ttaccggtca gtagcagcgg gccgcctgcc gacgtcggcc cccgccaact
     1741 gggagcgcct tcggtgggac tatccaggtg cgacggttca gtgcgaccag aggcgcgcga
     1801 ctcttctgag cacgagtggt gccgagtcga cgaccagtcg cggggagagc cgatagagga
     1861 gccagggcac gcgagcgtgg cggggggaga cgatgaaggg gcggttgcgg gcgacgccct
     1921 cgagcacgtc ctcggccagc gcgctcggcg ggtacgcctt tcctatcgac ttggtgagga
     1981 gggcacgccc gtcgggggcc gacttcggcg aggggaggtc gctcgggttc gggtggtcga
     2041 ggagcggcgt gtctatgacg ccggggcaga cgacgctcac acgcacgcc
//
LOCUS       DATGJT010000422         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_987943, whole genome shotgun sequence.
ACCESSION   DATGJT010000422 DATGJT010000000
VERSION     DATGJT010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987943"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VKX24_07235"
     CDS             <1..193
                     /locus_tag="VKX24_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017613428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HLJ08314.1"
                     /translation="VGWVDAAGDGEWAVALRGAQLDGRRARLVAGAGIVAGSDPDAEW
                     AETEVKLRPMLAAIGALPG"
     gene            complement(222..2009)
                     /gene="menD"
                     /locus_tag="VKX24_07240"
     CDS             complement(222..2009)
                     /gene="menD"
                     /locus_tag="VKX24_07240"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011291845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070204 -
                     2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylic-acid synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HLJ08315.1"
                     /translation="MTSTACARTVVDEWARAGLTDAVVAPGSRSAPLALALADDARIR
                     LHVHLDERSAAFFALGLGKASGRPALALCTSGTAAAHFHPAVLEAHHSRVPLLVCTAD
                     RPAELRATGAPQATDQVRLYGPAVRFFADVPADGDPGARAAWRPIAARAWAEAAGPPA
                     GPVHLNVAFREPLVPVPGAAAEPGRAGARPWTASHRSAPALAAAEERALIQRLRTAPR
                     GLLVAGWGSPPAAGAVAAALGWPLLADAISGHRSPGGFDAGRPAGPSAFPGAGGEVAG
                     APAVITTYEALLRAPGFAEAHRPDLVLRCGGPLTSKIATAWLDAAVPQILVDPDGAWL
                     DPNRTADERVPALPDPARLAEAGDPSRGPSPGGEWRDGWLHAEAIARGALEAFLDGDD
                     RPSEGRVARDVAAACAASASQPALFVASSMPVRDLEAFAGRVPSRVYANRGVNGIDGL
                     VSTVLGIAAGGGRPVVGLLGDLGFLHDAGGLLGARRREVDAVFVVVDNDGGGIFSFLP
                     QAALSSDRFELLFGTPPDADPAEVAGAYGLPARRVERSADVGPAVEEAVSAGGVQVVV
                     VPTGDRTANVDRHRQAWAAVAEALAKSAT"
BASE COUNT          246 a          806 c          903 g          209 t
ORIGIN      
        1 ggtcggctgg gtcgacgccg ccggcgacgg cgagtgggcg gtggcgctcc ggggcgccca
       61 gctcgacggg cgccgggccc gcctcgtggc cggcgccggg atcgtggccg ggtccgaccc
      121 cgacgccgag tgggccgaga cggaggtgaa gctccggccg atgctggccg ccatcggggc
      181 cctccccggc tgagatcgcc gcggtccggg gacttcggtc gtcaggtggc cgacttggcc
      241 agcgcctcgg ccaccgcggc ccaggcctgg cggtgccggt cgacgttggc cgtacggtcg
      301 ccggtcggga cgacgacgac ctgcacgccg ccggcgctca ccgcttcctc caccgccggg
      361 ccgacgtccg ccgaccgttc cacccgccgg gccgggagcc cgtaggcgcc ggccacctcc
      421 gccgggtcgg cgtcgggcgg cgtgccgaag aggagctcga accggtcgga ggacagggcg
      481 gcctggggca ggaaggagaa gatcccgccg ccgtcgttgt cgacgacgac gaagacggcg
      541 tccacttccc ggcggcgggc cccgaggagg ccgccggcgt cgtggaggaa gccgaggtcg
      601 ccgaggaggc cgaccaccgg ccgcccgccg ccggcggcga tgccgagcac ggtcgacacc
      661 aggccgtcga tcccgttcac gccccggttg gcgtagacgc gggaggggac ccgtccggcg
      721 aaggcctcga ggtcgcggac cggcatgctg gaggcgacga acaacgccgg ttgcgacgcc
      781 gacgcggcac aggccgccgc cacgtcccgg gccacccggc cctcggacgg ccggtcgtct
      841 ccgtcgagga aggcctcgag ggccccccgg gcgatcgcct cggcgtgcag ccagccgtcg
      901 cgccactcgc cgccgggcga cggaccgcgg gaggggtcgc ccgcttcggc gagccgtgcc
      961 gggtcgggga gggccggcac ccgctcgtct gccgtccggt tggggtcgag ccaggccccg
     1021 tcgggatcga cgaggatctg ggggacggcg gcatcgagcc acgccgtggc gatcttcgac
     1081 gtgagcggcc cgccgcaccg gagcaccagg tccggccggt gcgcctcggc gaacccgggc
     1141 gcccgcagga gcgcctcgta cgtcgtgatg accgccggtg ccccggcgac ctcccccccc
     1201 gcaccaggga atgccgatgg gccggccggc ctgccggcgt cgaacccgcc gggcgagcgg
     1261 tgcccggaga tcgcatcggc gaggagcggc cagccgaggg cggcggcgac ggcgcccgcc
     1321 gccggcgggc tcccccaccc ggcgacgagg agaccccgcg gcgccgtccg caaccgttgg
     1381 atcagcgccc gctcctcggc cgccgccagc gccggcgccg agcggtgcga cgcggtccag
     1441 gggcgagcgc ccgcccgacc cggctccgcc gccgcgcccg ggacgggcac gagcggttcg
     1501 cggaaggcga cgttgaggtg gaccggtccg gccggcgggc cggcggcttc ggcccaggcc
     1561 cgggcggcga tcggccgcca ggcggcccgg gcgccggggt caccgtcggc cggtacgtcg
     1621 gcgaagaacc ggacggccgg tccgtagagg cggacctggt cggtggcctg gggggcgccg
     1681 gtggcccgga gctcggcggg gcggtcggcg gtgcagacga gaagcggcac ccgggagtgg
     1741 tgcgcttcca ggacggcggg gtggaagtgg gcggcggccg tgcccgacgt gcagagcgcc
     1801 agcgccggcc ggcccgatgc cttcccgagg cccagggcga agaaggccgc cgagcgctcg
     1861 tcgaggtgga cgtggaggcg gatccgggcg tcgtcggcca gggccagggc cagcggcgcc
     1921 gaccgggaac cgggggccac gacggcgtcg gtgagcccgg cccgggccca ctcgtcgacg
     1981 acggtccggg cgcatgcggt actcgtcacg atgcccgccc cgcccgggcg gccgccgctt
     2041 gcgccccggg gagggccgcc gggcaccgtg ggtgcgtgcg gcgcgcgggg tgcgtggcag
     2101 catcgccccg gtgcacgaga tcgacgtggc ggtggagggc ggtcccggcc ggcggctggt
     2161 gctg
//
LOCUS       DATGJT010000423         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_885600, whole genome shotgun sequence.
ACCESSION   DATGJT010000423 DATGJT010000000
VERSION     DATGJT010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_885600"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VKX24_07245"
     CDS             <1..307
                     /locus_tag="VKX24_07245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08316.1"
                     /translation="TPVNGNGSGNGSGGQTPSATPPATTPALPAVVPALSAVVPALTS
                     LAPALPTAPALPALPAAVPALARLVPALPAAPVIPPARSEAPAPALLPDLSNRLGLD"
     gene            complement(304..1185)
                     /gene="galU"
                     /locus_tag="VKX24_07250"
     CDS             complement(304..1185)
                     /gene="galU"
                     /locus_tag="VKX24_07250"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010175461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HLJ08317.1"
                     /translation="MSKVRKAVIPAAGLGTRFLPATKSQPKEMVPVIDKPTIQYVVEE
                     AVGAGITDILVITGRGKRAIEDHFDRNFELEFYLEQGKKNEELEQVQAISEMADIHYI
                     RQRDPLGLGHAVSVARQHVGSEPFAVLLGDDIMVDDSKLLRSMLDVYDRYGRSVVAVL
                     EVPREDIRNYGCVTPEVMEENLVRIRSIVEKPKPEDAPSNLAVIGRYVFTPEIFDALD
                     RITPGAGGELQLTDAISLLLQTQTVFGYAFETGRYDIGKKIDFLRATVELALDRADLG
                     DEFRSFLADLVQRRRIV"
     gene            complement(1204..>2054)
                     /locus_tag="VKX24_07255"
     CDS             complement(1204..>2054)
                     /locus_tag="VKX24_07255"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLJ08318.1"
                     /translation="RRVLLARSGIGPDAPELSLPVGTGLAGSTAESLVPLLYPGEGTQ
                     PVFPEPEVATAMAVPFFSRGDLLGVVAVYGHGEEGTFGADDLETLVTLVTQAGTAVDN
                     VSLHEEARRLSITDGLTGLWNRRQLDLRCQEELERAIRFGRPVGVVFCDVDHFKDVNT
                     EWHHQGGDAVLVEVAQRLAAATREIDVVARYGGEEFVLLLPETDLAGSRVLAEKVRRA
                     MSDEPVEHAGRTRTVTLSMGVAAYPHSGTSVRTLLAAAQEALGRAKANGRNRIEEAQP
                     KMRSTG"
BASE COUNT          261 a          753 c          732 g          308 t
ORIGIN      
        1 gacgccggtc aacgggaacg gcagcggcaa cgggagcggc ggccagaccc cgtcggcgac
       61 gccgccggcg accacgcccg ccctgccggc ggtggtcccc gccctgtcgg cggtggtccc
      121 ggccctgacg tcgctggcgc cggctctgcc gacggcgccc gccctgccgg cgctgcccgc
      181 cgccgtaccg gcgctggcgc ggctggtccc cgccctgccg gccgcgccgg tcataccgcc
      241 ggcccggtcg gaggcgccgg ctccggcgct gctccccgac ctgtcgaacc ggttggggct
      301 ggactagacg atcctgcgcc gctggacgag gtcggccagg aaggatcgga actcgtcgcc
      361 gaggtcggcc cggtcgagcg ccagctcgac cgtggcccgg aggaagtcga tcttcttgcc
      421 gatgtcgtag cggcccgtct cgaaggcgta gccgaacacc gtctgggtct gcagcagcag
      481 gctgatggcg tcggtcagct gcagctcccc gccggcgccc ggcgtgatcc ggtcgagggc
      541 gtcgaagatc tccggcgtga agacgtagcg gccgatgacc gccaggttcg acggggcgtc
      601 ctccggcttg ggcttctcga cgatcgaccg gatccggacg aggttctcct ccatcacctc
      661 cggcgtgacg cagccgtagt tccggatgtc ctcccggggg acctcgagga cggccaccac
      721 cgagcgcccg tagcggtcgt agacgtcgag catcgaccgc agcagcttgg agtcgtcgac
      781 catgatgtcg tcgccgagga ggacggcgaa gggctccgac ccgacatgct gccgggcgac
      841 cgagaccgca tgacccagcc ccagcgggtc gcgctggcgg atgtagtgga tgtcggccat
      901 ctcggagatg gcctgcacct gctcgagctc ctcgttcttc ttgccctgct ccaggtagaa
      961 ctcgagctcg aagttgcggt cgaagtggtc ctcgatggcc cgtttccccc ggccggtgat
     1021 cacgaggatg tcggtgatgc cggcgccgac cgcctcctcc accacgtact ggatggtggg
     1081 cttgtcgatg accggcacca tctccttggg ctggctcttg gtggccggca ggaaccgggt
     1141 gccgagcccc gccgccggga tgaccgcttt ccgaaccttg ctcatggctg catcatcacc
     1201 ggctcacccg gtgctccgca tcttgggctg ggcctcttcg atccggttcc gcccgttggc
     1261 cttggcccgc cccagcgcct cctgggcggc ggccagcagg gtgcggacgc tggtcccgct
     1321 gtggggatag gcggccacgc ccatcgacag cgtcaccgtc cgggtgcggc cggcgtgctc
     1381 caccggctcg tcgctcatcg cccggcggac cttctcggcc agcacccggg agccggccag
     1441 gtcggtctcg ggcagcagca ggacgaactc ctcgccgccg tagcgggcca ccacgtcgat
     1501 ctcccgggtg gccgccgcca gccgctgcgc cacctcgacg aggacggcgt cgccgccctg
     1561 gtggtgccat tccgtgttga cgtccttgaa gtggtcgacg tcgcagaaca ccacgccgac
     1621 cggccggccg aagcggatgg cccgctccag ctcctcctgg cagcgcaggt cgagctggcg
     1681 ccggttccag aggccggtga gaccgtcggt gatcgacagc cgccgggcct cctcgtggag
     1741 cgagacgttg tcgacggcgg tgccggcctg ggtgaccagc gtgaccagcg tctccaggtc
     1801 gtcggcgccg aacgtgccct cctcgccgtg gccgtacacg gcgaccacgc cgagcaggtc
     1861 gccccggctg aagaacggga cggccatggc cgtggcgacc tccggctccg ggaagacggg
     1921 ctgggttcct tcgccggggt acagcagcgg caccaggctc tcggccgtgc tgccggccag
     1981 gcccgtcccc acggggaggc tcagctccgg ggcgtcgggc ccgatcccgg accgggcgag
     2041 gaggacccgc cggg
//
LOCUS       DATGJT010000424         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1093556, whole genome shotgun sequence.
ACCESSION   DATGJT010000424 DATGJT010000000
VERSION     DATGJT010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093556"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1068)
                     /locus_tag="VKX24_07260"
     CDS             complement(<1..1068)
                     /locus_tag="VKX24_07260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08319.1"
                     /translation="MAADLRPSDRLWFKRCRRSWAFGSRLRRSLEPAGRRYRLDLDRA
                     VRDGLAVYYFPGMWEWDRTVVRPLAFAAFEKTLHRQREGHELTVAEDDQWNGALAGGR
                     RILEQYLAWAPAVDRFWPVRVETDFDVQIPDPDSPGADLVAPAGEPVRYGGRVDLLIV
                     DEHDAYWIMRHRLVDRFSDEDLLALDDELVAACWAWELFYLGMRISGTIHNEIRPAGD
                     PPDPGDPVRLPRAARTFAQARAQHRRMYAQAEDVPSETVTEEGGGMFRRTRIPRHRAA
                     LEDLGRRLAAEARDMLDASLPLYPAPAPESCAACHFRAPCLTLNEGGDAEAVLAGAYQ
                     PRPPEAPPEGRLGAVTWSMNRG"
     gene            complement(1102..2181)
                     /gene="hypE"
                     /locus_tag="VKX24_07265"
     CDS             complement(1102..2181)
                     /gene="hypE"
                     /locus_tag="VKX24_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020642862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HLJ08320.1"
                     /translation="MSMTSEQHVLQRIEAARQRKPRIKEERITLSHGAGGKATHVLVE
                     ALFLDAFRNPLLEPLEDQAVLRIGEQRLAFTTDSYVVSPLFFPGGDIGDLAVNGTVND
                     LAMSGARPLYLSCGFILEEGFPVADLERIAASMAAAARAAGVSIVTGDTKVVQKGKAD
                     GCYVNTAGVGVLERPVELGAQHCRPGDAVIVSGPIGDHGITIMLARGELDIESDVISD
                     TAPLHGLVAALLDAVPDGVRALRDATRGGVATIVNEMARASNVAVVVDESTVPVRPEV
                     NGACEILGIDPLYVACEGRFVAVVDGAAAEDAVAALRSRPGGEGACVIGHVKDDPPGL
                     VLLKTAFGGTRIVDMLVGDPLPRIC"
     gene            complement(2178..>2333)
                     /locus_tag="VKX24_07270"
     CDS             complement(2178..>2333)
                     /locus_tag="VKX24_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007024163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HLJ08321.1"
                     /translation="VIKPWECKVFGTACTPETPIGTCMVSSEGACAAYYNFGRFTRER
                     VRVAIGP"
BASE COUNT          324 a          825 c          876 g          308 t
ORIGIN      
        1 gccccggttc atcgaccagg tgacggcgcc gaggcggccc tccggcggtg cttcgggcgg
       61 gcggggctga taggcgccgg ccagcaccgc ttcggcatcg ccgccctcgt tcaacgtgag
      121 gcagggagcg cggaagtggc aggcggcgca ggactccggc gccggggcgg ggtacagcgg
      181 cagcgaggcg tcgagcatgt cgcgggcctc ggcggccagg cgccggccca agtcctcgag
      241 ggccgcccgg tggcggggga tgcgggtccg gcggaacatg ccgccgccct cctcggtcac
      301 ggtctcgctc gggacgtcct ccgcctgggc gtacatgcgc cggtgctggg cccgggcctg
      361 ggcgaaggtc cgagccgccc gggggagccg gaccgggtcg ccggggtcgg gcggatcgcc
      421 ggccggacgg atctcgttgt ggatcgtgcc ggagatccgc atcccgaggt agaagagctc
      481 ccaagcccag caggcggcga cgagctcgtc gtcgagggcc aggagatcct cgtcgctgaa
      541 gcggtcgacg aggcggtggc gcatgatcca gtaggcgtcg tgctcgtcga cgatcagcag
      601 gtcgacgcgc ccgccgtagc ggacgggctc gccggccggc gccaccagat cggcgccggg
      661 ggagtcggga tcggggatct ggacgtcgaa gtcggtctcc acccgtaccg gccagaaacg
      721 gtcgacggcc ggggcccagg ccaggtactg ctcgaggatc cggcgcccgc cggccagcgc
      781 accgttccac tgatcgtcct cggcgacggt cagttcgtga ccctcccgtt gccggtgcag
      841 cgtcttctcg aaggcggcga aggccagtgg ccgcaccacg gtgcggtccc actcccacat
      901 ccccgggaag tagtagacgg ccagcccgtc ccgcaccgcc cggtcgagat cgagccggta
      961 gcgccgtccg gccggctcga gactccgccg gagccgggag ccgaaggccc acgaccgccg
     1021 gcaccgcttg aaccacaacc ggtcggacgg gcgcaggtcg gcggccatgg caccctgcgg
     1081 cggctcggtg cccccgacgc ctcagcagat gcgggggagc ggatcgccga cgagcatgtc
     1141 gacgatgcgc gtcccgccga aggcggtctt gagcaggacg aggccgggcg ggtcgtcctt
     1201 gacgtggccg atgacgcagg cgccttcgcc accgggccgg gatcggaggg cggcgacggc
     1261 gtcctcggcg gcggcgccgt cgaccacggc tacgaaccgg ccctcgcagg cgacgtagag
     1321 ggggtcgatg ccgaggatct cgcaggcgcc gttgacctcg ggccggaccg gcacggtgct
     1381 ctcgtcgacc acgacggcca cgttcgacgc ccgggccatc tcgttgacga tcgtcgccac
     1441 gccgccccgg gtggcgtcgc gcagcgcccg gacaccgtcg gggacggcgt cgagcaacgc
     1501 cgccaccagg ccgtgcagcg gcgccgtgtc ggagatcacg tcggactcga tgtcgagttc
     1561 gccccgggcc agcatgatcg tgatgccgtg gtcgccgatc gggccggaca cgatcaccgc
     1621 gtcgcccggc cggcagtgct gcgccccgag ctccaccggc cgctccagga cgccgacgcc
     1681 ggcggtgttc acgtagcagc cgtcggcctt tcccttctgc acgaccttgg tgtcgccggt
     1741 gacgatcgac acgccggccg cccgggcggc ggcggccatc gaggcggcga tgcgctccag
     1801 gtcggcgacc gggaacccct cctccaggat gaacccgcag gagaggtaca gcggacgggc
     1861 ccccgacatg gccaggtcgt tgaccgtgcc gttgacggcc aggtcgccga tgtcgccgcc
     1921 ggggaagaac agcggcgaca ccacgtagga gtcggtggtg aaggccagcc gctgctctcc
     1981 gatgcggagc acggcctggt cctccagcgg ctccaggagg ggattgcgga aggcgtcgag
     2041 gaacagcgcc tcgacgagca cgtgggttgc cttcccgccc gccccgtggg acagggtgat
     2101 tcgctcctcc ttgatcctcg gcttgcgctg ccgggcggcc tcgatccgct ggaggacgtg
     2161 ctgctcgctc gtcatgctca tgggccgatg gccacccgga cgcgttcccg ggtgaagcgg
     2221 ccgaagttgt agtaggcggc gcaggcgcct tccgacgaca ccatgcacgt cccgatcggg
     2281 gtctccggcg tgcaggccgt cccgaagacc ttgcactccc acggcttgat gac
//
LOCUS       DATGJT010000425         2851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_160518, whole genome shotgun sequence.
ACCESSION   DATGJT010000425 DATGJT010000000
VERSION     DATGJT010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160518"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      255..355
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            362..1615
                     /locus_tag="VKX24_07275"
     CDS             362..1615
                     /locus_tag="VKX24_07275"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015172913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HLJ08322.1"
                     /translation="MDYVTGLRCRECARPYPAQALHVCDYCFGPLEVVYDYERIRAEL
                     TREQVAAGPGTIWRYGPLLPVDDPAPIDLGAGFTPLVRADRLAAELGLGELWIKNDTA
                     NPTGSFKDRVVSVALTKARQLGFKVAACASTGNLANSVAAHAARAGMASVVFIPRDLE
                     VAKVVTTAVYGGHLVAVDGTYDDVNRLCAELASDHPDWAFVNVNVRTYYSEGSKTLAF
                     EVAEQLGWRAPDHVVVPVASGSQLVKVAKGFGELYEVGLLDEEPHVRVSGAQAEGCSP
                     VARAFIDEADAIRPVRPATIAKSLAIGNPADGWYALEAVRRSGGALAAVTDDEILDGI
                     RLLARTEGIFAETAGGVTIATLARLAAQGIVRRDETVVAYVTGHGLKTVEALTDSTGP
                     TATIAPTLEAFAAAVDLDGDLGGRR"
     gene            1612..1887
                     /locus_tag="VKX24_07280"
     CDS             1612..1887
                     /locus_tag="VKX24_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-like small modifier protein 1"
                     /protein_id="HLJ08323.1"
                     /translation="MSVTVRIPTQLRTLTGGAGELTLSGSTVGEVLKALDAAHSGMAD
                     RLFDDAGQLRRFVNVFVDDEDVRFLDGLATPVADGQTVSIVPAVAGG"
     gene            complement(1848..>2851)
                     /locus_tag="VKX24_07285"
     CDS             complement(1848..>2851)
                     /locus_tag="VKX24_07285"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HLJ08324.1"
                     /translation="GRLLTAWLVGSAVPLVALAAVPLLHTRGGLVSLSVSIVSLAAIG
                     LVAGYFLTRATAGSVSEPLAGVRRALESVRHGDLSVEVPVDDPGELGRLQADLNRMVA
                     GLRERRRLEDLFGRHVGEEVARQALAEPAVLGGRHRQVSVLFVDVIGSTALASTRPPD
                     EVVTMFNRLFGCVVEAVTAERGWVNKFEGDAALCVFGAPADDPGHAAAALRAARRLRR
                     LLDGLAAELPVLDVAIGVSTGTAVAGNVGAVDRYEYTVIGDPVNEAARLCELAKDRAG
                     RVLVSGTTLDAAGDEARHWQRRGEEVLRGRSRPTVIAVPWGPEEPQPPATAGTIETV"
BASE COUNT          408 a         1069 c         1008 g          366 t
ORIGIN      
        1 tccaccccac ccccccgggc ggtgagcgcc tcgtggaccg gtccggccac cccggccacc
       61 gtccgctcct cgtttcgggc cgggatgcac accgacaccg tgacgcgccc ccgctcccgg
      121 gcgaggacgg cggcgtcgaa ggagccgtgg tggaagacgg ggccctgtcc cacgcccaga
      181 tcttggccca ggcgcggcga ggccaccccg gcacccgtcg ttgagcgggg tgccggtatt
      241 gccctaacat ggacagatca tccagagcgg ctgagggacg ggcccgacga cgccgcggca
      301 accagctcga ctcccgaagg ggagcagcca ggtgccaatg cccgaccgat gaggaggcgt
      361 tgtggactac gtcaccggac tgcgttgccg ggaatgcgcg cggccctacc cggctcaggc
      421 gctccacgtg tgcgactact gcttcggccc gctcgaggtc gtctacgact acgagcgcat
      481 ccgggcggag ctgacccggg agcaggtcgc cgccgggccc ggcaccatct ggcggtacgg
      541 gccgctgctg cccgtcgacg acccggcgcc catcgacctc ggcgccggct tcaccccgct
      601 ggtgcgggcc gaccggctgg cggccgagct ggggctcggc gagctgtgga tcaagaacga
      661 cactgccaac cccaccggtt cgttcaagga ccgcgtcgtc tccgtggccc tcaccaaggc
      721 ccgccagctc ggcttcaagg tggcggcctg cgcgtcgacg gggaacctgg ccaattcggt
      781 ggccgcccac gcggcgcgcg ccggcatggc ctcggtggtg ttcatccccc gggacctcga
      841 ggtcgccaag gtcgtcacga cggccgtgta cggcgggcac ctggtggccg tcgacggcac
      901 ctatgacgac gtgaaccggc tgtgcgccga gctggcgagc gatcatcccg actgggcgtt
      961 cgtgaacgtg aacgtccgca cctactactc cgagggctcg aagaccctcg ccttcgaggt
     1021 tgccgagcag ctcggctggc gcgctcccga ccatgtggtc gtgccggtgg cctcgggcag
     1081 ccagctggtc aaggtggcca agggcttcgg cgagctctac gaagtgggac tgctcgacga
     1141 ggagccccac gtcagggtgt cgggcgcgca ggccgagggt tgctccccgg tggcgcgggc
     1201 cttcatcgac gaagcggacg ccatccggcc cgtgcggccg gccaccatcg ccaagtctct
     1261 ggccatcggc aacccggccg acgggtggta cgcgctcgag gcagtccggc gcagcggcgg
     1321 cgccttggcg gcggtcaccg acgacgagat cctcgacggc atccgcctcc tcgccaggac
     1381 cgagggcatc ttcgccgaga ccgctggcgg ggtgaccatc gccaccctcg cccgcctggc
     1441 cgcacagggg atcgtgcgtc gcgacgagac cgtggtggcc tacgtgaccg gccacgggct
     1501 caagacggtg gaggcgctca ccgactccac cggcccgacg gccaccatcg cccccaccct
     1561 cgaggcgttc gccgccgccg tcgacctcga cggcgacctt ggtggccggc gatgagcgtc
     1621 accgttcgca tccccacgca gctgcgcacc ctcacgggag gagcgggcga gctcacgctg
     1681 tcgggctcca cggtgggaga ggtcctgaag gcgctggacg ccgcgcactc gggcatggcc
     1741 gaccggctct tcgacgacgc cgggcagctc cggcggttcg tgaacgtctt cgtcgacgac
     1801 gaggacgtcc gcttcctcga tgggctggcg acgccggtgg ccgacggtca gacggtctcg
     1861 atcgtcccgg ccgtggccgg aggctgaggc tcctcaggtc cccagggcac ggcgatgacg
     1921 gtgggtcgcg accgtcctcg cagcacctcc tcgccccggc gctgccagtg gcgcgcctcg
     1981 tcgccggcag catcgagggt ggtgccgctc accaggacgc gcccggcgcg gtccttggcg
     2041 agctcgcaca ggcgggccgc ctcgttcacg gggtcgccga tcaccgtgta ctcgtagcgg
     2101 tccacggcgc cgacgttgcc ggccacggcc gtcccggtgg agacgccgat ggccacgtcg
     2161 agcacaggca gctcggcggc caggccgtcg aggagccggc ggaggcgcct cgccgcccgc
     2221 agggcagcgg cggcatgccc agggtcgtcg gcgggggcgc cgaagacgca cagcgccgcg
     2281 tcgccctcga acttgttcac ccagcccctc tcggcggtca ccgcctcgac gacacagccg
     2341 aagaggcggt tgaacatggt caccacttcg tccggcggcc gcgtactggc cagcgccgtc
     2401 gacccgatga cgtcgacgaa cagcaccgag acctggcggt ggcggccccc gagcacggct
     2461 ggctcggcca aggcctgacg ggcgacctcc tcgcccacgt gccggccgaa gaggtcctcc
     2521 aaccggcgac gctcgcgcag cccggccacc atgcggttca ggtctgcctg cagccgtccc
     2581 agctcgccgg ggtcgtccac cggcacctcg accgagagat cgccgtggcg caccgattcg
     2641 agggcgcggc gcacgccggc gagcggctcg ctcacggagc cggccgttgc ccgcgtgagg
     2701 aagtagccgg cgacgagacc gatcgccgcc agcgacacga tcgacaccga caggctcacg
     2761 agcccacccc gggtgtgcag caacggcacg gcggccaggg ccacgagcgg caccgctgaa
     2821 cccaccagcc atgccgtgag cagccggccc c
//
LOCUS       DATGJT010000426         2119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_885927, whole genome shotgun sequence.
ACCESSION   DATGJT010000426 DATGJT010000000
VERSION     DATGJT010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_885927"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1807)
                     /locus_tag="VKX24_07290"
     CDS             complement(<1..1807)
                     /locus_tag="VKX24_07290"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HLJ08325.1"
                     /translation="MSVELMAVDGLRAVLQVTAALHESGSSPARFHRAAVEAVVTTVG
                     ADRAALLLYDAEGVMRFKAWRGLSDDYRRAVEGHTPWSPDDADAKPILVRDVFADPGM
                     AEFWPVFETEGIGALAFVPLLHEGRVVGKFMLYYDGPHAFSEAELAVAEVLAGQVASS
                     VHRREADEAERAAVSRLAGLQRVTAELSRAVTMVDVAAVALGSARAELGAASAAVCLC
                     AGEDLEIIEAVGYPDEVMTHWRRFPLAADLPASEAVRTSRPVFLRSPAERDDRYPVFA
                     ASPVTPDAAFAIVPLSESEPVGCLVFGFAEPREFPPEDESFLGALAGQCEAAFSRARL
                     YEDRERSRARAAFLAEASAVLGTSFDVEELAMAAADLTAGRLADRCTVSLVEERLEVE
                     AGRADPAGHAAVVRVPMAVRGRPIGSLTLANDGGRPLEPGTGEVAAELAGRIAVAVDH
                     ARTYRRQARLSRILQASLLPPSLPEIPGMELAACYAAGGAGVDVGGDFYDVVPLDGRR
                     FILVVGDVCGRGVDAATTASLVRHTIRSTAITDPSPVAVLTHLNDVLLRENEPGRFEP
                     RFCTAVVALVSGDRPTPTVTLAVGGHPLPALYRADG"
     gene            complement(1873..>2119)
                     /locus_tag="VKX24_07295"
     CDS             complement(1873..>2119)
                     /locus_tag="VKX24_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08326.1"
                     /translation="PAGTPRPIVIATADRIVKSFRMKAPQSPQPGSHLLHGTTRARGL
                     TSSVVIDRYVRQASHMPGQPSSGALAGAFPSEYAAMG"
BASE COUNT          306 a          779 c          793 g          241 t
ORIGIN      
        1 ggccgtcggc ccggtacagg gccggcagcg ggtgcccccc gacggccagc gtgacggtcg
       61 gtgtcggacg atcgccggac acgagcgcta cgacggcggt gcagaagcgg ggttcgaagc
      121 ggcccggctc gttctcccgc agcagcacgt cgttgaggtg ggtgaggacg gcgacggggg
      181 acgggtcggt gatcgccgtc gaccggatcg tgtggcggac gagtgaggcg gtggtggcgg
      241 cgtcgacgcc ccggccgcag acgtcgccga cgacgaggat gaagcggcgg ccgtcgagcg
      301 ggacgacgtc gtagaagtcg cccccgacgt cgacaccggc gcctccggcg gcgtagcagg
      361 cggccagctc cattccgggg atctccggga gcgacggcgg cagcaggctg gcctgcagga
      421 tccgcgacag ccgcgcctgc cggcggtagg tccgggcgtg gtcgacggcg acggcgatcc
      481 gcccggccag ctcggcggcg acctcgccgg tgccgggttc gagcgggcgg ccgccgtcgt
      541 tggccagcgt cagcgacccg atcgggcggc cccggaccgc catcggcacc ctgaccacgg
      601 cggcgtggcc ggccggatcg gccctgccgg cctcgacctc cagccgctcc tcgacgaggg
      661 agacggtaca gcggtcggcc agccggccgg cggtgaggtc ggcggcggcc atggccagct
      721 cctcgacgtc gaacgacgtc ccgagcaccg ccgacgcctc ggccaggaag gccgccctcg
      781 cccgggaccg ctcccggtcc tcgtagagcc gggcccggct gaaggcggcc tcgcactgcc
      841 cggccagagc gccgaggaac gactcgtcct ccggcgggaa ctcccggggc tcggcgaagc
      901 cgaagaccag acagccgacg ggctcgctct ccgagagcgg gacgatggcg aaggcggcgt
      961 cgggggtcac cggcgaggcg gcgaacacgg ggtaccggtc gtcccgctcg gccggcgagc
     1021 gcaggaacac cggccgcgac gtccggaccg cttcgctggc cggcaggtcg gcggccagcg
     1081 ggaaccgccg ccagtgggtc atcacctcgt cgggataacc cacggcctcg atgatctcga
     1141 ggtcctcgcc ggcacacagg cacacggcgg cactggccgc gcccagctcc gcccgggcgc
     1201 tgcccagagc gacggcggcc acgtcgacca tcgttaccgc ccgggagagc tccgcggtga
     1261 ccctctggag cccggccagg cgcgacaccg ccgcccgctc ggcttcgtcg gcctcccgcc
     1321 ggtggaccga cgacgccacc tggccggcca gcacctcggc cacggccagc tccgcctcgg
     1381 agaaggcgtg ggggccgtcg tagtagagca tgaacttgcc gacgacccgg ccttcgtgga
     1441 ggagcgggac gaaggccagc gccccgatcc cctcggtctc gaacaccggc cagaactcgg
     1501 ccatccccgg gtcggcgaag acgtcgcgca cgaggatcgg cttggcgtcg gcgtcgtcgg
     1561 gcgaccacgg cgtgtgcccc tccaccgccc ggcggtagtc gtcggagagg ccccgccagg
     1621 ccttgaaccg catgacgccc tcggcgtcgt agagcagcag cgccgcccgg tcggcgccga
     1681 cggtggtcac gacggcctcg accgccgccc ggtggaagcg ggcaggcgac gacccggact
     1741 cgtgcagcgc cgccgtgacc tggagcacgg cccgcagtcc gtcgaccgcc atcagttcca
     1801 cgctcaccgc ccgcagtcag ggtgacggaa gcggcgcacc cgcagcccgc ctcgcccacg
     1861 aaggctgcct gctcaaccca ttgcagcgta ttcggacgga aacgcgcccg ccagagcgcc
     1921 ggatgacggc tggcccggca tgtgcgaggc ttggcggaca tatcggtcaa tcacgaccga
     1981 ggaggtgagg cccctcgccc gcgtcgttcc gtggagcagg tgagaaccag gctggggaga
     2041 ctggggtgcc ttcatgcgaa agctcttcac gatcctgtcg gcggtggcga tcacgatcgg
     2101 cctcggcgtc cccgccgga
//
LOCUS       DATGJT010000427         4031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_264593, whole genome shotgun sequence.
ACCESSION   DATGJT010000427 DATGJT010000000
VERSION     DATGJT010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4031
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264593"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..648
                     /gene="cysC"
                     /locus_tag="VKX24_07300"
     CDS             7..648
                     /gene="cysC"
                     /locus_tag="VKX24_07300"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF003013.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HLJ08327.1"
                     /translation="MDRVTSETVAAGLMVHSLRRSENVVPHTFSVDREARARLMAQRP
                     RVVWLTGLPGSGKSTLADGLERYLHGMGIHTYVLDGDSVRRGFNRDLGFTPEDRAENV
                     RRVGEAAHMLFDAGLVVIVALVSPFRADRLAARELFDKGDFLEVWVDTPLDICRARDP
                     KGLYAKATIGDLPNMTGVGQDYEPPDHPDLVVDGTVPVDELVGRLLELLQASD"
     gene            complement(700..1662)
                     /locus_tag="VKX24_07305"
     CDS             complement(700..1662)
                     /locus_tag="VKX24_07305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009775048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HLJ08328.1"
                     /translation="MVDAEPKRIVVTGGAGFLGSHVCETLFERGDHVICVDNFLTGVR
                     ANIESLQHQRRFELIEADVAQGALAVAAGPLHAVLHLASPASPVDYLAHPLETLAVGS
                     EGTRHAIELAADRGARFLLASTSEVYGDPQLHPQVESYWGHVNPIGPRSVYDEAKRFA
                     EALTMAWHRTHGTDVAIARIFNTYGPRMRRDDGRMISNFLAQAVDGSPLTVYGDGSQT
                     RSPCYVDDMVRGLVALLDSACIGPVNLGNPAEISVLDLAHKILELSGSSSPIEYRELP
                     EDDPVRRRPDITVAREQLGWEPQVGLDEGLARTLEALRKVPASG"
     gene            complement(1705..3027)
                     /locus_tag="VKX24_07310"
     CDS             complement(1705..3027)
                     /locus_tag="VKX24_07310"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016333292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HLJ08329.1"
                     /translation="MTTPSTTTSSTQHARIAVVGAGYVGVTTAVCLAHHGHAVVCGDN
                     DLAKVEKLSAGIPTFVEEGLGALLNQGLSSRRLHFVTSAAASVRDAEFVFICVSTPGR
                     PDGSPDLSALEAVASEIAPHLSPGAVVVNKSTVPIGSTVLVERLLGRDDVTVVSNPEF
                     LREGSAIHDCLFPARIVVGGKDRTVAARVGELLGTDHAPLIVTDAATAEMIKYASNGF
                     LATKLSFANAVSDLCERVGADAHDVLRGMGYDPRIGSSFLHPGPGWGGSCLPKDTHAL
                     IFMAKQAGFPFPFLEEIIRSNEAHMETVVTKIRQACEGVLAGSVIAAWGLTFKAGTDD
                     LRQSPALAVLELVAEEGARIKAFDPTTIGRSVHELPDLEIHHDAYSACHGAKALTILT
                     EWPEFASVDLAKIAQVMAPSPTIIDTRSLLDPSEVRRAGINYVGVGRG"
     gene            3341..>4031
                     /locus_tag="VKX24_07315"
     CDS             3341..>4031
                     /locus_tag="VKX24_07315"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLJ08330.1"
                     /translation="MAERVLVTGGAGFIGGHLVEALLEAGHDVRVLDSLEPQTHGPDA
                     RPPSFLADVDVHIGSVTDPGAVARALDGVEVIFHEAAMVGVGQSMYDIAHYCESNTLG
                     AAVLLQAVVDNRADIRKMVVASSMSVYGEGAYVDAGGSPRRGGRDRKHLEAGDWEVRD
                     PQTDEALRPVPTTETKPLEPTSVYAITKRDHEELFLAIGQSYQIPTVALRYFNTYGPR
                     QALSNPYTGVVA"
BASE COUNT          635 a         1311 c         1407 g          678 t
ORIGIN      
        1 ctgctggtgg accgggtcac cagtgagacg gtggcggcag gtctgatggt gcactccctc
       61 cgtcgttcgg agaatgtggt tccccacacc ttctccgtcg accgcgaggc ccgagcccgg
      121 ctcatggccc agcggccaag ggttgtctgg ttgacgggtc tgccgggttc agggaagtcg
      181 acactggccg acggcctgga gcggtatctc cacgggatgg ggatccacac ctatgtgctg
      241 gacggcgaca gcgtccggcg agggttcaac cgcgacctcg ggttcacccc cgaggaccgg
      301 gccgagaacg tccgtcgagt cggggaagcg gcccatatgt tgttcgacgc cggcctggtt
      361 gtgatcgtgg cgctcgtctc tccattccgg gccgatcgtc tggcggcgcg ggagctgttc
      421 gacaaagggg acttcctgga ggtgtgggtc gataccccgc tcgacatctg tcgcgctcgt
      481 gaccccaaag gtctctacgc gaaggccacg atcggtgatc ttccgaacat gaccggggtt
      541 gggcaggact acgagcctcc cgaccatccc gatctcgtcg tcgatggaac cgtcccggtc
      601 gacgagttgg tggggcgact cttggagctt ctccaggcgt cggattgact cctggcgcgg
      661 gctgcggtgt gccccggtct gggttggcgc cgcgctgact caacccgacg caggaacctt
      721 gcgaagggcc tccagcgtcc ttgccagccc ttcgtcgagg ccgacctgag gctcccagcc
      781 caactgttcc ctggccaccg tgatgtcggg gcgccgcctc acggggtcgt cttccgggag
      841 ctcccggtac tcgatcggtg aggatgaccc ggagagctcc aggatcttgt gggcgaggtc
      901 gaggacgctg atctcggcgg ggttgcccag gttgaccgga ccgatgcacg ccgagtcgag
      961 cagcgcgacc aggcccctca ccatgtcgtc cacgtagcag gggctccggg tctgacttcc
     1021 gtcgccgtaa acggtgaggg gcgacccatc gacggcctgg gcgaggaagt tggagatcat
     1081 ccggccgtcg tcgcggcgca tacgggggcc gtacgtgttg aagatgcggg cgatcgccac
     1141 gtcggtcccg tgcgtccggt gccaagccat cgtcagcgcc tcggcgaagc gcttcgcctc
     1201 gtcgtacacg ctccgagggc cgatggggtt cacatgcccc caataggact cgacctgagg
     1261 gtggagctgt gggtcgccgt acacctcgct cgtcgaggcc aacaggaacc gggccccacg
     1321 gtcggcggcc agctcgatgg cgtgtcgtgt cccctccgat ccgaccgcga gggtctcaag
     1381 cggatgcgcc aggtagtcga ccggggatgc ggggctggca aggtggagga cggcatggag
     1441 cggacccgcg gcgacggcga gagcaccctg ggcgacatca gcctcgatga gctcgaaccg
     1501 tcgctggtgt tggagcgatt cgatgttggc tcggaccccg gtgaggaagt tgtcgacgca
     1561 gatgacgtgg tcgccacgct cgaacagggt ctcgcaaacg tgggagccga ggaaccccgc
     1621 gccgccggtg acgacgatcc gcttcggttc ggcgtcaacc atcgcccacg ccaacggccc
     1681 ctcgtcggcg gtggacctcg gggctcaacc tcgcccgact ccgacgtagt tgatcccggc
     1741 gcgcctcacc tcggagggat cgagcaggct acgggtgtcg atgatcgtgg ggctcggcgc
     1801 catgacctgg gcgatcttgg ccaggtcgac cgacgcgaat tccggccact cggtcagaat
     1861 ggtgagggcc ttggcaccgt gacacgccga gtaggcgtcg tggtggatct cgaggtcggg
     1921 cagctcgtgc accgacctcc cgatcgtcgt cgggtcgaac gccttgatcc gggccccttc
     1981 ctcggcgacc aattccagca ccgccaacgc cggggattgc ctgaggtcgt ccgtccccgc
     2041 cttgaaggtc aatccccacg cggcgatgac ggatcccgcg agcacgcctt cgcaggcctg
     2101 gcggatcttc gtcaccaccg tttccatgtg ggcttcgttg ctcctgatga tctcttccag
     2161 gaacgggaag gggaagccag cttgcttcgc catgaagatc agggcgtggg tgtcctttgg
     2221 caggcaggag ccgccccatc ccggtcccgg gtggaggaag gaagagccaa tccgggggtc
     2281 gtaccccatg ccacggagga cgtcgtgggc gtcggcgccg acccgttcgc acaggtccga
     2341 gacggcgttg gcgaaactga gcttggtggc gaggaagccg ttggacgcgt acttgatcat
     2401 ctcggcggtc gcggcgtcgg tgacgatcag gggggcatgg tccgtcccga ggagctcgcc
     2461 cactcgcgcg gccacggtcc ggtctttgcc accgaccacg atccgtgccg ggaacaggca
     2521 gtcgtgaatg gccgaaccct cccgcaggaa ctcggggttg gagaccacgg tgacgtcgtc
     2581 gcggccgagg agccgttcca cgagcacggt cgagccgatc ggcaccgtcg acttgttgac
     2641 cacgaccgct cccggcgaca ggtgcggggc aatttcgctg gccacggcct cgagggcgct
     2701 caggtcgggc gagccgtccg ggcggccggg ggtcgacaca cagatgaaga cgaactcggc
     2761 gtcccggacc gatgctgcgg ctgaggtcac gaagtggagg cgacgcgagg acaggccctg
     2821 gttgagcagc gcccccaggc cctcttcgac gaaggtcgga atgccggcgg acagcttctc
     2881 caccttggcg aggtcgttgt ccccgcagac gacggcatgg ccgtgatgcg ccaggcacac
     2941 tgccgtggtc accccgacgt agccggcgcc gacgacggcg atccgtgcgt gctgtgtcga
     3001 cgatgtcgtc gttgaagggg tcgtcatgct gcctctcgta actatctcgg tgcgatggtc
     3061 ggatccggca aggtccgcac gccggcccca ggcggacgaa cggtgagcac gtaggatacc
     3121 gccccccttc gctgcgctgc ctggggtcgt gacctgcggg ttctgcatcg cacgcggtgt
     3181 cgttgttgcc tcgcggcgac gcccgcgccg ggggtctcca ggttgtcgcc gtgagatggg
     3241 cattggtacc ctgctcggcg gtcatagaat ggctcgcttc caatggtgag caggtcaagc
     3301 ccgacgacct gaacttctcc gcataactcg aggaggaatc ttggcggaga gagtgctggt
     3361 cacgggaggt gccgggttca tcggcggcca tctcgtcgag gccctgctcg aggcgggcca
     3421 cgacgtgcgg gtgctcgaca gcctggaacc ccagacccac ggccccgacg cccgaccacc
     3481 ctccttcttg gccgacgtcg acgttcacat cgggtcggtg accgacccag gtgccgtggc
     3541 tcgggcactc gacggcgtcg aggtgatctt ccacgaggca gcgatggtcg gcgtcgggca
     3601 gtcgatgtac gacatcgccc actactgcga gtcgaacacg ttgggcgccg cagtcctgct
     3661 ccaggcggtg gtcgacaacc gggccgacat ccgcaagatg gtggtcgcat cgtcgatgtc
     3721 ggtgtacggg gagggggcct acgtcgacgc gggagggtcc ccacggcggg gcgggaggga
     3781 tcgcaagcac ctcgaggccg gtgactggga ggtccgcgac ccgcagaccg acgaggcgct
     3841 ccgaccggtc ccgacgacgg agaccaagcc cctcgagccg acctcggtgt atgcgatcac
     3901 gaagagggac cacgaggagc tcttcctcgc catcggccag agctaccaga tccccaccgt
     3961 cgccctgcgg tacttcaaca cctatgggcc acgccaggcc ctctccaacc cgtacaccgg
     4021 cgtcgtcgct a
//
LOCUS       DATGJT010000428         2096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1093892, whole genome shotgun sequence.
ACCESSION   DATGJT010000428 DATGJT010000000
VERSION     DATGJT010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093892"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1234)
                     /locus_tag="VKX24_07320"
     CDS             complement(<1..1234)
                     /locus_tag="VKX24_07320"
                     /inference="COORDINATES: protein motif:HMM:NF016099.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019290 - siderophore biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IucA/IucC family protein"
                     /protein_id="HLJ08331.1"
                     /translation="MGAVERTEVERRVLRQLLESLVYEGAIPAEVPGYRWRLGRRFSF
                     DRVRLGAEPVLRLAPGSAPVEVTSPVALLEGLAAAGVLRADPERCGGFAAELRQTVAN
                     DAEARAHWRSRRRCAADAGYDELESLVVDGHRYHPSYKSRLGFDAADNAEFGPEFGRP
                     LRPVWVALRRTAVECGGLDGGARPEMVDGRVVVPVHPWQWRRHAATTWAPLRAEGSLV
                     ELGRGDDDYRAQQSIRSLANASRPERPTLKLALSIVTTSTARTLAPHAVANAPVITGW
                     LERIVAGDAYLGRELRPVLLGERLGVAHSAELSAIWRDSLRPHLAAGEGAAPFTALCH
                     VDATGEPFVARWVKQQGVERWVRRLLEVTLPPVLHLLVAHGIALEAHAQNLILIHEDG
                     RPARLALRDFHDGLRFSPA"
     gene            complement(1244..>2096)
                     /locus_tag="VKX24_07325"
     CDS             complement(1244..>2096)
                     /locus_tag="VKX24_07325"
                     /inference="COORDINATES: protein motif:HMM:NF018031.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IucA/IucC family C-terminal-domain containing
                     protein"
                     /protein_id="HLJ08332.1"
                     /translation="QLRRGLDAAGVLAALGDLDGAVDGPAGGFGVLLELGYRHVRLPG
                     EAGAAIAAATGVVYREGPPMAGAASPMVVAALLEPDPIDGVPPVVRAVQRCRRGDGDG
                     RAWFERYVQLSVRPLCRLLVRHGVALEAHTQNSLVALDDGWPARFVVRDLEGAALNAE
                     HPGAADRFGALIAAGSPALYGEAEVWRRFGYYVLVNHLGQLIATLAEHVGPAEEQLWS
                     VVAAVLADEAVRHGADPAAAPLRRLLDGAGLPAKANLVSVFEGHGEQPTWVELANPLR
                     SGACVRS"
BASE COUNT          277 a          813 c          783 g          223 t
ORIGIN      
        1 cggccggcga gaaccgcagg ccgtcgtgga agtcccgcag cgccaggcgc gccggccggc
       61 cgtcctcgtg gatcaggatg aggttctggg cgtgggcctc gagggcgatg ccgtgggcca
      121 cgaggaggtg cagcaccggc ggcagggtga cctccagcag ccgccgcacc caccgctcga
      181 ctccctgctg cttcacccag cgggcgacga acggctcccc ggtggcgtcc acatggcaca
      241 gggcggtgaa cggcgccgcc ccctcccctg ccgccaggtg cggccggagg ctgtcgcgcc
      301 agatggccga cagctccgcc gagtgggcga cgccgagccg ctccccgagg agcaccggcc
      361 gcagctcccg gccgagatag gcgtcgccgg ccacgatccg ctccagccag ccggtgatca
      421 ccggggcgtt ggcgacggcg tggggggcca gcgtccgggc ggtcgaggtg gtgacgatcg
      481 acagcgccag cttcagcgtc ggccgctccg gacgggaggc gttggccagc gagcggatcg
      541 actgctgagc ccggtagtcg tcgtcgcccc tcccgagctc gaccagcgac ccctcggccc
      601 gcaacggcgc ccaggtcgtg gcggcgtgcc ggcgccactg ccaggggtgg acgggcacga
      661 cgacccgccc gtccaccatt tcgggccggg cgccgccgtc gaggccgccg cattccaccg
      721 ccgtacgtcg cagtgccacc cacaccggcc gcagcggccg gccgaactcc ggcccgaact
      781 cggcgttgtc ggcggcgtcg aacccgagcc gggacttgta ggacgggtgg tagcggtggc
      841 cgtcgacgac cagcgactcg agttcgtcgt aaccggcgtc ggcggcgcag cggcgccgtg
      901 accgccagtg cgcccgggcc tccgcgtcgt tggccaccgt ctgccggagt tcggcggcga
      961 agcccccaca ccgctcggga tcggcccgca gcacaccggc ggcggccagt ccctccagca
     1021 aggcgaccgg cgacgtcacc tccaccggcg ccgagcccgg cgccagccgc aggacgggct
     1081 ccgccccgag gcgcacccgg tcgaagctga accggcgtcc gagtcgccag cggtagcccg
     1141 gcacctcggc cgggatcgcc ccttcgtaga cgagcgactc caggagctgg cgcaggacgc
     1201 gccgctcgac ctcggttcgc tcgactgccc ccacgctatg gcgtcacgag cggacgcagg
     1261 cgccggaccg cagcgggttg gccagctcca cccaggtcgg ctgctcgccg tggccctcga
     1321 agacgctgac caggttggcc ttggccggca acccggcccc gtcgagcagc cggcgcagcg
     1381 gcgcggcggc gggatcggcg ccgtgccgga cggcctcgtc ggcgaggacg gcggccacca
     1441 cgctccacag ctgctcctcg gcggggccga cgtgctcggc cagcgtggcg atgagctggc
     1501 cgaggtggtt gacgaggacg tagtagccga agcggcgcca gacctcggcc tcgccgtaga
     1561 gggcggggct tccggcggcg atcagggccc cgaaccggtc ggcggcgccc ggatgctcgg
     1621 cgttcagcgc cgcgccctcg aggtcgcgga cgacgaagcg ggcgggccag ccgtcgtcga
     1681 gggccaccag cgaattctgc gtgtgggcct cgagagccac gccgtggcgg acgagcagcc
     1741 ggcacagtgg ccgcaccgac agctgcacgt agcgctcgaa ccacgcccgc ccgtcgccgt
     1801 cgccccggcg gcagcgctgc acggcccgca cgaccggcgg cacgccgtcg atcgggtcgg
     1861 gttcgagcag ggcggcgacc accatcggcg aggccgcccc cgccatcggc ggcccttccc
     1921 ggtacacgac accggtggcg gcggcgatcg ccgcgccggc ctcgcccggc agccggacat
     1981 gccggtagcc cagctcgagc aggacgccga agccgccggc cggcccgtcg acggccccgt
     2041 cgaggtcgcc cagcgccgcc aggacgccgg cggcgtcgag gccgcgccgc agctgc
//
LOCUS       DATGJT010000429         3958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1093991, whole genome shotgun sequence.
ACCESSION   DATGJT010000429 DATGJT010000000
VERSION     DATGJT010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093991"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VKX24_07330"
     CDS             <1..334
                     /locus_tag="VKX24_07330"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HLJ08333.1"
                     /translation="RFLTSSNRPLGRIATVGADGTPHVVPTGWTYNAILGTVDVTGRD
                     VQTTKKFRDVTRRPRAAIVIDGVADGGGWSPWAIEIAGRAEAVSGPPALIRIHPERVR
                     AWGLEHVV"
     gene            complement(348..3101)
                     /locus_tag="VKX24_07335"
     CDS             complement(348..3101)
                     /locus_tag="VKX24_07335"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ08334.1"
                     /translation="MGRLAGFFFLVASVVTAASLVLHLPRGDHRAAVAAMSVAAAVAG
                     LATWHAPWPRWPAEAMRWTVPPAALALIAAMNHFDDRSPYTYVVAFPLVFAWVGLSQP
                     RWTSLRLAGPAAIAYLLPLLAAHRPAGELFSAALVIPVLVGLGEAFAWVAAGVARSFD
                     EQARTVALLRHEQLALQLLRVVAVAANEATTVDDAFRRAIEEICAYTAWPVGHAYLPD
                     GDGVLAPTGLWHLEDRERFESFRRATEETRFRPGAGLLDRVVRSGEPAWVVDVSTDPY
                     SPRAAGARQAGLRAAFGLPVLVDGEVVAVLEFFSFEPLEPDEPLLELARHVGTQLGRV
                     VERRRSEETLRASEERIRAVIDTAGDAFIGMDAGGIVTEWNREAEVMFGWSRADVLGQ
                     PVAELIVPPDLGEHQAGLGRFLCMGMGAILGRRLEMQARDRGGRDFPVELTVWSTPVG
                     SDAGLNAFIRDISERKSLEGELTRRALHDSLTGLPNRVLMLDRLGHALARGQRSGAAV
                     TVLFLDLDGFKRINDSLGHAAGDRVLAGIAERLGGALRPSDTIARIGGDEFAVLLEDT
                     GTVDGARIAERIGEALESPFVIDGHEALTQASIGVATGKPGEHSADDLIRNADLAMCK
                     AKAQGKAGYAVFEPGMHLAVVERLEFEAALRRALGLGEFFLLYQPVVRLADGSVVGME
                     ALIRWKRAGGAVVSPEQFIPVAEETGLIRDIGRWVLQEACGLAAAWQSEYAPTPALRL
                     SVNLSARQLQDPGLVKDVEAVLASSGLEPACLVLEITESLLMSEPDVAVQRLGDLKDL
                     GVKLAIDDFGTGYSSLSYLRRFPVDVLKIDRSFVTALGTGPEDCALVHAIVDLGQTLR
                     LRVVAEGIETPAELQELQRLDCEYGQGYLFARPLTAEAMSRVIADARQARGLFPPRQS
                     ALR"
     gene            3666..>3958
                     /locus_tag="VKX24_07340"
     CDS             3666..>3958
                     /locus_tag="VKX24_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020387273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HLJ08335.1"
                     /translation="MGREERLSRVFVELADTLVSGFDVVEFLHMLTERCVELLDVGAA
                     GVVLADERENLRVMASSDERAHILEVFEVQNQEGPCLDCYRSGVALVNVPLAA"
BASE COUNT          617 a         1363 c         1435 g          543 t
ORIGIN      
        1 ccggttcctc acatcctcga accgtccgct cggccgcatc gcgaccgtcg gggctgacgg
       61 cacgccccat gtcgtcccga ccggatggac ctacaacgcc atcctcggca cggtcgacgt
      121 caccggacgc gacgtgcaga cgacgaagaa attccgcgac gtgacccgcc gcccgcgagc
      181 agcgatcgtg atcgacggcg tcgccgacgg cggcggctgg agcccgtggg ccatcgagat
      241 cgcaggccgc gccgaagccg tcagcgggcc gcccgccctg atccgcatcc accccgaacg
      301 cgtccgtgcc tggggcctgg aacacgtcgt ctgacacgtc gccgatctca ccgcagtgct
      361 gattggcgtg gcgggaacag ccctctggcc tgcctggcgt cggcgatgac gcgggacatg
      421 gcctcggcgg tgaggggccg ggcaaacagg tagccctggc cgtactcgca gtcgagccgt
      481 tgcagctcct gcagctcggc gggtgtctcg ataccttcgg ccacgacccg cagccggagc
      541 gtctgaccga ggtccacgat ggcgtggacg agggcgcagt cctcgggacc ggtcccgagg
      601 gcggtgacga aggaccggtc gatcttgagg acgtcgaccg ggaagcgtcg caggtaactg
      661 agcgaggagt agccggtgcc gaagtcgtcg atggcgagct tgacgccgag gtccttgagg
      721 tcgcccagcc gctggacggc gacgtcgggc tcggacatca gcaggctctc ggtgatctcg
      781 aggacgaggc aggccggctc cagaccggag gaggcgagca ccgcttcgac gtccttgacc
      841 agcccggggt cctggagctg gcgggccgag aggttgacgc tcaggcgcag cgccggtgtg
      901 ggggcgtact ccgattgcca ggcggcggcc agcccgcagg cttcctggag gacccagcgg
      961 ccgatgtcgc ggatcagccc cgtctcctcc gccacgggga tgaactgttc gggggagacg
     1021 acggcgccgc cggcccgctt ccaccggatg agcgcctcca tccccaccac ggagccgtcg
     1081 gcgaggcgga ccaccggctg gtagaggagg aagaactccc cgaggcccag cgcccggcga
     1141 agcgccgctt cgaattcgag gcgctcgacc acggcgaggt gcatgcccgg ttcgaacacg
     1201 gcgtaccccg ccttaccctg cgccttggcc ttgcacatgg ccaggtcagc gttgcgtatc
     1261 aggtcgtcgg cgctgtgctc gccgggtttg ccggtggcga cgccgatgct ggcctgcgtc
     1321 agcgcctcgt gcccgtcgat cacgaacggc gactccagtg cctcgccgat tcgctccgcg
     1381 atgcgggccc cgtccacggt gccggtgtcc tccaggagaa cggcgaattc gtcgcccccg
     1441 atgcgggcaa tggtgtcgga cgggcggagc gcgcccccca ggcgttcggc gatgccggcc
     1501 agcacccggt cgcccgccgc gtggccgagg ctgtcattga tccgcttgaa gccgtcgagg
     1561 tcgaggaaga ggaccgtgac ggcggcgccg ctgcgctggc cccgggccag ggcgtggccc
     1621 agccggtcga gcatcaggac ccgattgggc aggccggtga gggagtcgtg cagcgcccgc
     1681 cgggtcagct cgccctccag actcttgcgc tcggagatgt cacggatgaa ggcgttgagt
     1741 ccagcgtcgg atccgaccgg cgtcgaccac acggtgagct cgacggggaa gtccctcccg
     1801 ccccggtccc gggcctgcat ctccaggcgc cgaccgagta tggcgcccat ccccatgcag
     1861 aggaagcgcc ccaatcccgc ctggtgctcg ccgaggtccg ggggaacgat cagctcagcc
     1921 accggctggc cgaggacgtc ggcccgggac cacccgaaca tcacctccgc ctcgcggttc
     1981 cattccgtga cgatcccgcc ggcgtccatc ccgatgaagg cgtcgccggc ggtgtcgatc
     2041 accgcccgga tccgttcctc gctggcccgg agcgtctctt cgctcctgcg ccgttccacc
     2101 acccggccga gctgggtccc gacatggcgg gccagttcca gcaggggctc gtcgggttcg
     2161 agcggctcga aggagaagaa ctcgagaacg gccaccacct ccccgtccac gaggaccggc
     2221 aagccgaatg cggcccgcag gccggcctgg cgcgcccccg ccgcccgggg ggaatacggg
     2281 tcggtcgaga cgtcgaccac ccaggccggc tccccggagc ggacgacccg gtcgagcagg
     2341 ccggctcccg gccggaagcg ggtctcctcg gtggcgcgcc ggaaggactc gaaccgctcg
     2401 cggtcctcca ggtgccagag accggtgggg gccaggaccc cgtcaccgtc gggcaggtag
     2461 gcgtgcccta cgggccaggc ggtgtaggcg cagatctcct cgatggctcg ccggaaggca
     2521 tcgtccaccg tcgtggcctc gttggccgcc accgccacca cccggaggag ctggagggcc
     2581 agctgttcgt ggcggaggag cgccaccgtt cgcgcctgct cgtcgaagct ccgggcgacc
     2641 ccggccgcca cccaggcgaa ggcttcgccc agacccacca agacgggaat caccaacgcc
     2701 gccgagaaca actcgccggc cgggcggtga gcggccagga gcggcagcag gtaggcgatc
     2761 gcggcggggc cggcgaggcg cagcgacgtc cagcgcggct ggctcagccc gacccaggcg
     2821 aacaccaaag ggaaggcgac aacgtaggtg taggggctgc gatcgtcgaa gtggttcatc
     2881 gccgcgatga gggcgagggc ggcgggaggc accgtccagc gcatcgcctc cgccggccag
     2941 cggggccagg gggcatgcca ggtggcgagc ccggccaccg cggcggcgac actcatggcg
     3001 gcgaccgcgg cacggtggtc gccccggggg aggtgcagca ccagcgaggc ggccgtgacc
     3061 acactcgcca ccaggaagaa gaatcccgcc aggcgcccca caaagcctgg tgacaacgca
     3121 ccagccggtc cggcgtcatg gggcgggcgc gtggggggaa gggagcacat cgccaaagcc
     3181 cctttcgagg gtcgagcggg taaggcctcc ggttggaacc ggtggcaaag atgaaaggca
     3241 cgtcgtctcg gggcgctttt gtttgaaatg gaagacgggt cgtcccgctc aatcgccttg
     3301 ctccgcaccc tgggcatctc acctgcttcc gggcgtgttt gcggtggagg cacacgtcac
     3361 cgggggctgg agcaacgctg cgaaagccgg cgcagaggca gccgtctttt cagcgagaat
     3421 agcagctatg ccgtcggcga taatccgcac tcgagcggca tatggaagcc gaagcttacg
     3481 cttttttggc cgcgccattg gtggtgggac ggccgagacc tgtcggcaac agccggtggc
     3541 ggggacgggc gcccgcctgg gaagccctgg gaggagggtt cggtccgcga cggtgtcccc
     3601 taccatggcc ggcgtcgcat ccacgggtct gaaggggatg cccgagcgga ggtgacggcg
     3661 gatcgatggg cagggaagag cggttgtccc gggtgttcgt ggaactcgcc gacacgctgg
     3721 tctcgggctt cgacgtggtc gagttcctgc acatgctgac ggagcggtgc gtggaacttc
     3781 tcgacgtcgg cgcggcgggc gtggtcctgg ccgacgagcg ggagaacctg cgggtgatgg
     3841 cgtcctccga cgagcgggcc cacatcctcg aggtcttcga ggtccagaac caggaaggtc
     3901 cctgcctcga ctgctaccgc agcggcgtcg cgctggtcaa cgtccccctc gccgccga
//
LOCUS       DATGJT010000430         2244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_56631, whole genome shotgun sequence.
ACCESSION   DATGJT010000430 DATGJT010000000
VERSION     DATGJT010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56631"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VKX24_07345"
     CDS             <1..787
                     /locus_tag="VKX24_07345"
                     /inference="COORDINATES: protein motif:HMM:TIGR01460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HLJ08336.1"
                     /translation="AFAFDLDGVIWRAGTIFPEAPPAIRAIQDAGKRLLFLTNNASYL
                     PSWIVEHLSGAGITVGEEAIMTSAIAARTYVTHHGLVGKRAFVMGTQPVVDQIADLLE
                     VVPVERGTAVDVVIVARDLAFTYDRLAAAADAIRNGAVFLASNRDHVMPTVDGFEPGT
                     GSVLAAVEAASGHTAIALGKPELPMMEAAAERIGREGVLMTGDRTDSDVAGARQVGWD
                     AAIVLTGVTKAGMPLDPAPDYVFPTLADLVGYRHSGNSPKEDR"
     gene            859..1389
                     /locus_tag="VKX24_07350"
     CDS             859..1389
                     /locus_tag="VKX24_07350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08337.1"
                     /translation="MVRKLAENPDFDLLDASGMARDLLRLGKEQAGKARSVVDDQLRR
                     RLNDLGLATREEVEQLQRRIAELEANAGPAPAAGIEPHPAGDFGADPAPPRRPRTARA
                     QRAPAARPAARGRAGATPTPAAATPPAPPTATAAKRSPARKPATTRAPARKPAANGAT
                     AGGSAPEAPEGNPATE"
     gene            1386..1544
                     /locus_tag="VKX24_07355"
     CDS             1386..1544
                     /locus_tag="VKX24_07355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08338.1"
                     /translation="MTENEGRPATDAAAELVRLSALPLEERPAALAEAVRRLEEELDA
                     TEGRPAGR"
     gene            1544..>2244
                     /locus_tag="VKX24_07360"
     CDS             1544..>2244
                     /locus_tag="VKX24_07360"
                     /inference="COORDINATES: protein motif:HMM:NF013856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HLJ08339.1"
                     /translation="MATPRRRLDRELVVRGLAADRDEALALVADQRVLVDGAPALTPD
                     RLVGGQADMHVLRPARAYASRGGEKLAGALDDLGLSPAGRRCLDAGAGHGGFTDCLLQ
                     RGANSVVAVDVGYGDLDWTLRTDPRVQVIERCNIRTADPAELGAPFDLVVADLSFISL
                     AAVAGVLTGATAPEGDLLVLVKPQFEAPPSDVEAGGIVTDPEVWAATIRTVAAAFRER
                     GLGTAGLAASRLKGAS"
BASE COUNT          309 a          875 c          794 g          266 t
ORIGIN      
        1 ggccttcgcc ttcgacctcg acggcgtgat ctggcgcgcc ggcacgatct tcccggaggc
       61 cccgccggcg atccgggcga tccaggacgc cggcaagcgc ctgctcttcc tgaccaacaa
      121 cgcctcctac ctgccctcct ggatcgtcga gcacctgagc ggtgcgggca tcacggtcgg
      181 cgaggaggcg atcatgacct cggcaatcgc cgcccggacc tacgtcacgc atcacggcct
      241 cgtgggcaag cgagccttcg tcatgggcac ccagccggtg gtcgaccaga tcgccgacct
      301 gctcgaggtc gtcccggtcg agcgcgggac cgccgtcgac gtggtcatcg tcgcccgcga
      361 cctcgccttc acctacgacc ggctggcggc ggcggccgac gccatccgca acggggcggt
      421 cttcctcgcc tccaaccggg accacgtcat gccgaccgtc gacggcttcg agccgggcac
      481 cggatcggtc ttggcggcgg tcgaggcggc gagcggccac accgcgatcg ccctcggcaa
      541 gccggagctg ccgatgatgg aggccgccgc cgaacggatc ggccgcgagg gggtcctgat
      601 gaccggtgac cgcaccgact ccgacgtcgc tggcgcccgc caggtcggct gggatgcggc
      661 catcgtgctc accggggtca ccaaggccgg catgccgctc gacccggcgc ccgactacgt
      721 cttccccaca ctggccgacc tggtgggcta tcgtcacagt gggaattcgc cgaaggagga
      781 tcgatgatcg atcaggttcg cgaggccctt cgccgagcat caaaggcggt tgaggccccc
      841 cgccgcagga ccgaggatgt ggtccgcaag ctcgctgaga acccggattt cgacctgctc
      901 gacgcctccg ggatggcccg cgacctgctc cggctgggca aggagcaggc cgggaaggcc
      961 cgctcggtcg tcgacgacca gctccgccgg cggctcaacg atctcggcct ggccacccgg
     1021 gaggaggtcg agcagctgca gcggcgcatc gccgagctcg aggcgaacgc cggcccggcg
     1081 ccggccgccg gcatcgagcc gcatcccgcc ggcgacttcg gtgcagaccc cgctccgccg
     1141 cgccggccgc ggaccgcccg cgcccagagg gcaccggcgg cccgacccgc cgcccgcggc
     1201 cgcgccggcg ccacgccgac ccctgcggcc gccaccccgc ccgcaccacc gaccgccacc
     1261 gcagccaagc gctccccggc acggaagccc gcaaccacgc gtgccccggc acggaagccc
     1321 gcagccaacg gcgcgaccgc cggcggctca gcgccggagg cgcccgaagg gaacccggcc
     1381 accgaatgac cgagaacgag ggccgcccgg cgaccgacgc cgccgccgag ctggtccgcc
     1441 tgtcggcgct gccactggag gagcgacccg ccgcgctggc cgaggccgtc cgccgcctgg
     1501 aggaggaact cgacgccacg gagggccgtc cggccgggcg gtgatggcga ccccacggag
     1561 gcggctcgac cgcgagctgg tcgtccgggg gctggcggct gaccgcgatg aggcgctggc
     1621 gctggttgcc gaccagcgcg tcctggtcga cggcgcccca gccctgaccc cggaccggct
     1681 ggtcggcggc caggccgaca tgcacgtcct ccgcccggcg cgggcctacg ccagccgggg
     1741 aggtgagaag ctcgccggcg cgctcgacga cctgggcctc tcgccggcgg gccggcggtg
     1801 cctcgacgcc ggggccggcc acggcgggtt caccgattgc ctcctgcaac ggggagccaa
     1861 ctcggtggtg gcggtcgacg tcggttacgg ggacctcgac tggaccctgc gcaccgaccc
     1921 cagggtgcag gtgatcgaac gctgcaacat ccgcaccgcc gacccggcgg agctgggcgc
     1981 cccgttcgat ctcgttgttg ccgacctgag cttcatctcg ctcgccgccg tcgccggggt
     2041 gctgaccggt gccacggcac cggagggcga cctgctcgtc ctggtcaagc cccagttcga
     2101 agcaccaccc tccgacgtcg aggccggagg gatcgtgacc gacccggagg tctgggcggc
     2161 gacgatccgc accgtcgccg ctgccttccg ggagcggggg ctcgggaccg ccggtctggc
     2221 cgcctcccgg ctcaaaggcg cctc
//
LOCUS       DATGJT010000431         2613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_783354, whole genome shotgun sequence.
ACCESSION   DATGJT010000431 DATGJT010000000
VERSION     DATGJT010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783354"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /gene="menA"
                     /locus_tag="VKX24_07365"
     CDS             complement(<1..590)
                     /gene="menA"
                     /locus_tag="VKX24_07365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046428 - 1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase"
                     /protein_id="HLJ08340.1"
                     /translation="MRRVPVTVWVEAARPKTLGAGVVCVLVGTAAAHRFIAWRFVAAL
                     VAAVAVQVAVNYANDYFDAVKGVDTGERIGPRRVTAAGLVSPATMRLAVGVALGVASI
                     PGLALAAVLGPQVIIVGLCSFAAALGYSGGPKPFASLGLGEVFVFVFFGLVGTIGSAY
                     VQTHRLLAVAAIAAVPVGFMAAALLLVNNIRDVTSDA"
     gene            complement(594..1415)
                     /gene="menB"
                     /locus_tag="VKX24_07370"
     CDS             complement(594..1415)
                     /gene="menB"
                     /locus_tag="VKX24_07370"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017624348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HLJ08341.1"
                     /translation="MEWKASGDYTDIRYETSLPDGGIAKITIDRPEVRNAFRPRTVSE
                     MSAAFEVARNDPQVGVVILTGEGPEAFCAGGDQKIRGDDGYIDEAGVGRLNVLDLQVQ
                     IRRLPKAVIAMVAGYAIGGGHVLHVVCDLTIAADNARFGQVGPKVGSFDGGYGSGLLA
                     RTVGIKKAKEIWFLCEQYDAFEAEKMGLVNKVVPLDQLEETTVAWARRILSMSPIAIR
                     MLKAGFNADTDGLAGIQQLAGDATMLFYMNAEAQEGRDAFKEKRAPRFDQFPRRP"
     gene            1469..>2613
                     /locus_tag="VKX24_07375"
     CDS             1469..>2613
                     /locus_tag="VKX24_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017611156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HLJ08342.1"
                     /translation="MPDLVALQLPFTSGFARALDEVWAAGDAALPLAPGLPQPEVARL
                     LADLKPARLVTPDGGRALEGAEPVESGTALVVPTSGTTGVAKGVVLSHASLVASATAT
                     AARLGLTPGDGARWLCCVPPSHVAGLMVIVRSRLAGTVPVMQPRFDPEAIGADREATL
                     ISVVPTMLRRLLAAGTDLSRFRWILLGGGAPAPDLVAAAQAAGGRIVTTYGMTETCGG
                     CVYDGVPLAGVRVELGGDGEVLLSGPMVMQGYRLRPAESEAALAGGCFHTADAGEFDA
                     AGRLRILGRRDDLIVTGGEKVSPAEVEAVLGEHPKVAEVAVAARPDPEWGQAVAAVVV
                     PAPGQPPTLAELRAFVTGRLASYKAPKHLVLVDDLPRGPTGKPIGLA"
BASE COUNT          363 a          952 c          930 g          368 t
ORIGIN      
        1 gcatcgctgg tgacatcccg gatgttgttg accagcagca gggcagcggc catgaagccg
       61 acgggaaccg cggcgatcgc agcgaccgcc agcagccggt gggtctgcac gtaggcggac
      121 ccgatcgttc ccacgagccc gaagaacacg aagacgaaca cctccccgag ccccagcgag
      181 gcgaacggct tcggcccgcc gctgtagccc agcgccgcgg cgaacgagca gagtccgacg
      241 atgatcacct gcgggccgag cacggccgcc agggccaggc cggggatcga ggccacgccc
      301 agcgccaccc cgacagcgag ccgcatggtg gccggggaga ccagcccggc ggcagtcacc
      361 cggcggggcc cgatgcgctc cccggtgtcc acgcccttga ccgcgtcgaa gtagtcattg
      421 gcgtagttga ccgctacctg caccgccacc gcggcgacca gggcggccac gaacctccag
      481 gcgatgaagc ggtgggccgc cgccgtgccg accaggacgc agacgacacc cgcgcccagg
      541 gtcttcggcc gggcggcctc gacccagacg gtgaccggga cgcgccgcaa tgctcagggg
      601 cggcggggga actggtcgaa gcggggtgcc cgcttctcct tgaacgcgtc gcggccctcc
      661 tgggcctcgg cgttcatgta gaagagcatc gtggcgtcac cggccagttg ctggatcccg
      721 gcgagaccgt cggtgtcggc gttgaacccg gccttcagca tccggatggc gatcgggctc
      781 atcgacagga tgcgccgggc ccaggccacc gtggtttcct ccagctggtc cagcggaacc
      841 accttgttga ccagccccat cttctccgcc tcgaaggcgt cgtactgctc gcagaggaac
      901 cagatctcct tcgccttctt gatgccgacc gtgcgggcga gcagacctga gccgtagccg
      961 ccgtcgaagg agcccacctt ggggccgacc tgaccgaagc gggcgttgtc ggcggcgatc
     1021 gtcaggtcgc acacgacgtg gagcacgtgg ccgccgccga tggcgtaccc ggccaccatg
     1081 gcgatcaccg ccttgggcag ccgccggatc tggacctgca ggtccaggac gttcagccga
     1141 ccgaccccgg cctcgtcgat gtagccgtca tcgccgcgga tcttctggtc gcccccggcg
     1201 cagaacgcct ccgggccttc accggtgagg atcaccacgc cgacctgcgg atcgttgcgg
     1261 gctacctcga aggcggccga catctcggag acggtgcgcg gccggaaggc gttgcggacc
     1321 tcgggacggt cgatggtgat cttggcgatg cccccgtccg gcaaggacgt ctcgtagcgg
     1381 atgtcggtgt agtctccaga ggccttccat tccatgagtt atcactccta aagtaatcac
     1441 tcagacggtt gggggtaacc gtagcacgat gccggatctg gtggcactcc agcttccctt
     1501 cacgtcgggt ttcgcccggg ccctcgacga ggtctgggcc gcgggcgacg ccgctctccc
     1561 gctggctccc gggctgcccc agcccgaggt cgcccggctc ctcgccgacc tgaagccggc
     1621 ccgcctcgtc acccccgacg ggggccgggc gctggagggg gcggagccgg tcgagtccgg
     1681 gaccgccctg gtggtcccga cctcgggtac gacgggcgtg gccaagggag tcgtgctgag
     1741 ccacgccagc ctggttgcct cggccaccgc cacggccgcc cgtctcggcc tgaccccggg
     1801 cgacggtgcc cgctggctgt gctgcgtccc gccgagccac gtcgccgggc tgatggtgat
     1861 cgtccggtcc cggctcgccg gaaccgtccc ggtgatgcag ccccggttcg atcccgaggc
     1921 gatcggggcg gaccgggaag cgacgctgat ctcggtcgtg ccgacgatgc tccgccggct
     1981 gctggcggcg ggcaccgatc tctcccgatt ccgctggatc ctcctcggcg gcggcgcgcc
     2041 cgcgccggac ctggtggccg ccgcccaggc cgccggtggc cggatcgtca ccacctacgg
     2101 gatgaccgag acctgcggcg ggtgcgtgta cgacggcgtg ccgctcgccg gggtgcgggt
     2161 cgagctgggc ggcgacggcg aggtcctgtt gtcggggcca atggtgatgc aggggtaccg
     2221 gctccggccg gccgagagcg aggcggccct ggccggcggc tgcttccata ccgctgacgc
     2281 cggggagttc gacgccgccg ggcgcctcag gatcctgggc cgccgggacg acctgatcgt
     2341 caccgggggc gagaaggtgt cgccggccga ggtcgaggcg gtgctcggcg agcaccccaa
     2401 ggtcgccgag gtggcggtcg cagcccgccc ggacccggag tggggccagg cggtcgctgc
     2461 cgtcgtcgtc cccgccccgg ggcagccgcc gacgctggcg gagctccgcg cctttgtcac
     2521 cggccgcctc gcctcctaca aggcgcccaa gcacctcgtc ctggtcgacg acctcccccg
     2581 cggccccact ggcaagccga tcggcctcgc cga
//
LOCUS       DATGJT010000432         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_161322, whole genome shotgun sequence.
ACCESSION   DATGJT010000432 DATGJT010000000
VERSION     DATGJT010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161322"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..1279
                     /locus_tag="VKX24_07380"
     CDS             191..1279
                     /locus_tag="VKX24_07380"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLJ08343.1"
                     /translation="MKIGVLAPPWVSVPPPRYGGVETVVDSLAVGYQAAGHDVRLFTV
                     GDSTCPVPKLHLYDQAAEGDPAGATVTELVHVLAGYEALSDCDLVHDHTIAGPLIAPG
                     PVVTTAHCPLDGEGARLYGRMSRSAIIVAASEAQVVPGVPVARVIHHGIDASAFPVGA
                     GDGGYLVFLGKFTAEKGAHRALEAAYKSGQRLFLAGKVREPAERWYFERYVAPYLNDR
                     LRFVGEVTQEEKRDLLAGARALLFPIRWNEPFGMVMLEALACGTPVLAFDEGAAGEVV
                     DDGRTGFLCHNEGHMAEAIGRVDELDRQACRAAAENHFSAERMVGEYLELFAQLVFEP
                     LAERPLREFGAGGASTDVWSPNPSSRRR"
     gene            1298..2296
                     /locus_tag="VKX24_07385"
     CDS             1298..2296
                     /locus_tag="VKX24_07385"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016933550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HLJ08344.1"
                     /translation="MRVTVLGAGSWGTTVAALSAGRNATTLWARNPDVAAAVNEKHDN
                     PSYLPGFTLPETLQATSDLEEAVGRAELLVVGVPSHGFRTVLEQAAPHVPYWIPVVSL
                     TKGFEAGTLFRMTEVIRDVLPGRVAGALSGPNLAKEIMAGNAAASVIATEDLSVAREL
                     QRVLQRGLFRIYTNHDVIGCEVGGALKNVVAIATGIAQGLSVGDNTRAAVISRGLAEL
                     TRLGVAMGAEAATMSGLAGMGDLIATCISPLSRNRQVGERLGRGESIDDILASMKMVA
                     EGVKTAHTVMELADRHQVELPICAEIRRVVSGEIAAPEAYRGLMRRAPAGHESEPV"
BASE COUNT          334 a          887 c          867 g          321 t
ORIGIN      
        1 gagggccgcc gccgggcgca ccggctcgtg ctcgggcggg gcgagctcct cgtgaccggc
       61 ggcgccacgc agcgggcctg ggagcacagc gtccccaagg tggcctcggc cgggccccgc
      121 ctgagcctga ccttccggca cggcctgctg cccgtcaccg ggcgctcctg aaccccgata
      181 ccctcggatc atgaagatcg gtgtgctggc gccgccctgg gtctccgtcc cgccgccccg
      241 ctacggcggc gtggagaccg tggtcgacag cctggcggtg gggtaccagg ccgccggtca
      301 cgacgtccgc ctgttcaccg tcggcgactc cacctgcccc gtccccaagc tccacctcta
      361 cgaccaggcg gccgagggcg acccggccgg ggcgacggtc accgagctcg tccacgtgct
      421 ggccggctac gaggcgctgt ccgactgcga cctcgtccac gaccacacga tcgccgggcc
      481 gctcatcgcc cccggcccgg tggtgaccac cgcccactgc ccgctcgacg gcgaaggcgc
      541 ccgcctctac ggccgcatgt cccgctcggc gatcatcgtc gccgcctccg aggcccaggt
      601 cgtgcccggc gtgcccgtgg cccgggtcat ccaccacggc atcgacgcct cggccttccc
      661 ggtcggcgcc ggcgacggcg gctacctcgt gttcctcggc aagttcacgg ccgagaaggg
      721 cgcccaccgg gcgctggagg cggcctacaa gtcgggccag cgcctgttcc tggccggaaa
      781 ggtccgggag ccggccgagc gctggtactt cgagcgctac gtcgccccct acctcaacga
      841 ccggctccgg ttcgtgggcg aggtgaccca ggaggagaag cgcgacctcc tggccggggc
      901 ccgggcgctg ctcttcccca tccgctggaa cgagccgttc gggatggtga tgctggaggc
      961 cctggcctgc ggcacgccgg tcctggcctt cgacgaaggg gcggccggcg aggtggtgga
     1021 cgacggccgc accggcttcc tgtgccacaa cgagggccac atggcggagg cgatcggccg
     1081 ggtggacgag ctcgaccggc aggcctgccg ggcggcggcc gagaaccact tctcggccga
     1141 gcggatggtg ggcgagtacc tggagctgtt cgcccagctg gtgttcgagc ccttggccga
     1201 gcggccgctg cgggagttcg gcgccggcgg cgcctccacc gacgtgtggt cgccgaaccc
     1261 gagcagccgc cggaggtagc gcggtaggtt gcaccccgtg cgggtgacgg tgctcggggc
     1321 gggatcgtgg gggacgacgg tggcggcgct ctccgccggc cgcaacgcga cgaccctgtg
     1381 ggcccgcaat cccgacgtgg ccgccgccgt caacgagaag cacgacaacc cgtcctacct
     1441 gcccgggttc acgctgcccg agacgctgca ggcgaccagc gacctcgagg aggcggtggg
     1501 cagagcggaa ttgctggtgg tcggcgtgcc gtcgcacggc ttccggacgg tgctggagca
     1561 ggccgcgccc cacgtgccgt actggatccc cgtcgtcagc ctcaccaagg gcttcgaggc
     1621 cggcacgctc ttccgcatga ccgaggtgat ccgcgacgtg ctgcccggcc gggtcgccgg
     1681 ggcgctctcg ggccccaacc tggccaagga gatcatggcc ggcaacgccg ccgccagcgt
     1741 catcgccacc gaggacctgt cggtggcccg ggagctgcag cgggtgctgc agcggggcct
     1801 gttccggatc tacaccaacc acgacgtcat cggctgcgaa gtgggtggag ccctcaagaa
     1861 tgtcgtggcc atcgccaccg gcatcgccca gggcctctcg gtcggcgaca acacccgggc
     1921 ggcggtcatc tcccggggtc tggccgagct cacgcgcctc ggcgtggcca tgggcgccga
     1981 ggccgccacg atgtcgggtc tggccgggat gggggatctg atcgccacct gcatcagccc
     2041 cttgagccgc aaccgccagg tcggcgagcg gctgggcagg ggcgagtcga tcgacgacat
     2101 cctggcctcg atgaagatgg tcgccgaagg ggtgaaaacc gcccacacgg tgatggagct
     2161 ggccgaccgc caccaggtcg agctgcccat ctgcgccgaa atccgccgcg tcgtgagcgg
     2221 cgagatcgcc gcccccgagg cctaccgggg cctgatgcgg cgggcgccgg ccggccacga
     2281 gtcggagccc gtttgacgcc ggcctgaacg ccgggcgaac cccttcataa gttgctcaga
     2341 ggcccggcgg catcctgcgg gacgcaaccc cccacaggag aagaaaaccg atgatccacc
     2401 aagccgtcg
//
LOCUS       DATGJT010000433         2356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_469925, whole genome shotgun sequence.
ACCESSION   DATGJT010000433 DATGJT010000000
VERSION     DATGJT010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469925"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..773
                     /locus_tag="VKX24_07390"
     CDS             <1..773
                     /locus_tag="VKX24_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011433259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HLJ08345.1"
                     /translation="EPAPQTKVTVSHDGQSSEVMTAAATVGDLLAGLGVTLDADDEVT
                     PPLDAPPGARVTVVRVEVTQVTEERALPVAEQRHDDLALPKGETRVEQDGSPGLERVL
                     YLVTRRDGRISSKRKVSSEVVTPATPRVVIVGRGGGRTVPAGVDEDVPLKLRIAEGDV
                     PSVGPAPAENPAPGATGGHQEGGASWYHYRPGTCAHRTLPKGTVVRVINLATGQTATC
                     TVADRGPFVAGRIIDLDRSVFLAIAGPNQGVVRVRIEW"
     gene            852..1718
                     /gene="rsmA"
                     /locus_tag="VKX24_07395"
     CDS             852..1718
                     /gene="rsmA"
                     /locus_tag="VKX24_07395"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013473947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HLJ08346.1"
                     /translation="MRSLLAAHDVRPSRALGQNFLADPNTARRIVRLAGVGPGQRILE
                     IGPGVGSLTVALAEAVSPGGEVLALELDRHLLPVLGEVVGGLPEVRVVHGDALSADYD
                     ALLDGAGPWAMVSNLPYNVATPLVARLLDEVPRLAVLSVMVQKEVAERLAAPPGSRAS
                     GAISVKVAYHATAAVVGAVPSTVFLPRPKVDSAVVRFVRRTAPPVDVPSPGALFALAR
                     AGFAQRRKTLRQALRPALGDRVEEVLAAAGIPPLTRAEALTLDQWAGLARAAGASGPA
                     APGGGGDCGAGG"
     gene            1715..>2356
                     /locus_tag="VKX24_07400"
     CDS             1715..>2356
                     /locus_tag="VKX24_07400"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HLJ08347.1"
                     /translation="MTRDVRVLARAKLTLSLRVLGRRPDGYHDLEALVVSLREPHDVI
                     GLRIQAPFGVRVRLSGRAVVGVPADDTNLAARAARLLLEAAAEGDDPGPWAASGLDIS
                     LHKSIPSGAGLGGGSADAAGTLVGGARLLGLDLDPAVLAALGATLGSDVPFCVIGGIA
                     RMRGRGEIIEPLPFPAGLARSSDPAGAWSPARLSAWPPGASAAGSWPPGAAGRS"
BASE COUNT          244 a          877 c          932 g          303 t
ORIGIN      
        1 cggagcccgc cccgcagacc aaggtgacgg tcagccacga cggtcagagc tccgaggtca
       61 tgaccgcggc ggccacggtc ggcgacctcc tggccgggct cggcgtcacg ctcgacgccg
      121 acgacgaggt gaccccaccg ctcgacgcac cgcccggcgc acgggtgacg gtggtccgtg
      181 tcgaggtcac gcaggtgacg gaggagcgcg ctctgccggt ggccgagcag cgccacgacg
      241 acctggccct gcccaagggc gagacgaggg tcgagcagga cgggtcgccg ggcctggagc
      301 gggtgctgta cctggtgacc cggcgggacg gtcggatcag cagcaagcgg aaggtgtcgt
      361 cggaggtcgt gacgccggcg actccccggg tggtcatcgt cggtcggggc ggcggacgga
      421 ccgtcccggc cggcgtcgac gaggacgtgc cgctcaagct ccgcatcgcc gagggcgacg
      481 tcccctcggt ggggcccgcc cccgccgaga accccgctcc cggcgccacc ggcggccacc
      541 aggagggcgg cgcctcctgg taccactacc ggcccgggac gtgcgcccac cggacgctgc
      601 ccaagggcac ggtggtcagg gtcatcaacc tggccaccgg ccagacggcg acgtgcaccg
      661 tggccgaccg ggggccgttc gtcgccggcc ggatcatcga cctcgaccgg agcgtgttcc
      721 tcgccatcgc cggtccgaac cagggagtcg tgcgcgtccg catcgagtgg tgaccgtcgg
      781 gcccgggggt ccggggggtg tcccccggaa agcactacgg tcccggtgtg cgcctgctgt
      841 ctccagcgga cgtgcggtct ctcctcgccg cccacgacgt ccggccgagc cgcgccctgg
      901 gacagaactt cctcgccgat cccaacaccg cccggcggat cgtccggctg gccggcgtgg
      961 ggccggggca gcggatcctg gagatcggcc cgggcgtcgg gtcgctgacc gtcgccctgg
     1021 ccgaggccgt ctcgcccggg ggggaggtgc tggccctgga gctcgaccgg cacctcctgc
     1081 cggtgctggg cgaggtggtg ggcggcctgc cggaggtgcg cgtcgtccac ggcgatgccc
     1141 tgagcgccga ctacgacgcc ctgctcgacg gcgccgggcc ctgggccatg gtgtcgaacc
     1201 tgccctacaa cgtggccacg ccgctcgtgg cccggctgct cgacgaggtg ccccggctgg
     1261 cggtgctgtc ggtcatggtc cagaaggagg tcgccgagcg gctggcggcg ccgccgggct
     1321 cgcgggcgtc gggggcgatc tcggtgaagg tcgcctacca cgccaccgcc gccgtcgtcg
     1381 gagccgtccc ctcgacggtg ttcctgcccc ggccgaaggt cgactccgcc gtcgtccgat
     1441 tcgttcggcg gacggcgccg ccggtcgacg tgccgtcgcc gggggcgctg ttcgcgctgg
     1501 cccgggccgg gttcgcccag cgccgcaaga cgctccgcca ggccctgcgg ccggcgctcg
     1561 gcgatcgggt ggaggaggtg ctggcggcgg ccgggatccc gccgctgacg cgggccgagg
     1621 cgttgacgct ggaccagtgg gcgggcctcg cccgggcggc cggcgcctcc ggtccggcgg
     1681 cgccgggcgg cggcggggac tgcggggcgg gcgggtgacc cgggacgtgc gggtgctggc
     1741 ccgggccaag ctgaccttgt cgctgcgggt gctcgggcgc cggcccgacg ggtaccacga
     1801 cctggaggcg ctcgtggtct cgctgcggga accgcacgac gtgatcgggc tgcgcatcca
     1861 ggcgccattc ggggtccggg tgcgcctgtc gggccgggcg gtcgtcggtg tgccggcgga
     1921 cgacacgaac ctggccgccc gggccgcccg gctgctgctg gaagcggcgg ccgagggcga
     1981 cgaccccggg ccctgggcgg cgtcgggcct cgacatctcg ctccataagt cgatcccgtc
     2041 cggggccggc ctcggcggcg gctcggccga cgccgccggg acgctggtcg gcggcgcccg
     2101 cctcctcggt ctcgatctcg acccggcggt gctcgccgcc ctcggcgcca cactcggctc
     2161 cgacgtcccg ttttgcgtca tcggcggcat cgcccggatg cggggccggg gcgagatcat
     2221 cgaaccgctc ccgttcccgg ccggcctcgc ccgttcgtcg gatccggccg gcgcctggag
     2281 cccggcccgg ctgtcggcgt ggcccccggg agcgtccgcc gccgggtcgt ggccgccggg
     2341 cgccgctggc cggtcg
//
LOCUS       DATGJT010000434         3692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_266090, whole genome shotgun sequence.
ACCESSION   DATGJT010000434 DATGJT010000000
VERSION     DATGJT010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3692
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266090"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1791
                     /gene="dnaX"
                     /locus_tag="VKX24_07405"
     CDS             <1..1791
                     /gene="dnaX"
                     /locus_tag="VKX24_07405"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR02397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HLJ08348.1"
                     /translation="QEAVSTALRNAVREGRVGHAYLFSGPRGTGKTTTARLLAKALNC
                     TGDRSTLPPGEPCNACPSCVEITAGTSMDVVELDAASNRGVGEMRSLLERVAYRSAGG
                     ARKVYIVDEVHMLTKEASTALLKTLEEPPDHVIFVLATTDPQMVLPTIRSRTQHFEFS
                     LLAADRLAAHLADIATREGVEADPDALAIIARRAGGSARDALSLLDQALAYGEGRLRP
                     EQVAALFGGTATAARGAIVDALAAGDVPALLERLDALLGAGVDARTLADDLLRHLREV
                     FLVLSSPGRVRLETPEEDRAELAAQGESLGAAGIVRALETLGEAAIEIRRAPDPRLVL
                     EVTLVRLARRDVGTIEALAERLTRLERALDELRRAARGGAASPTEPPGEAPRPAARPG
                     PQAALGALRKSPAPAGAPPPSPAAAPVPDAEPAPVPAAETAAETAAETPAGAKEAAIT
                     LEDAAAAWSKAVEGFRPRLKAMAKEAHPIRVDGDTVVVGLPSRFEKVHLPTITGEAAA
                     VTAVLSDLLGRPVRLSVVLDDDVLSPQAGPPPAGGPPVDVGDGGGAEAMAAEMARPPE
                     PAGGGRGVDSPVGLVIETFGASIESETVRE"
     gene            1797..2138
                     /locus_tag="VKX24_07410"
     CDS             1797..2138
                     /locus_tag="VKX24_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HLJ08349.1"
                     /translation="MASKNEMNQMMKQVQKMQADMMATQEKLASETVEASVGGGVVKA
                     VVTGSGTLESITIDPGAVDPDDVEMLQDLIVAAVNEGLRLAQELQAQSFGGITNALGG
                     LGGGLGGLFGQ"
     gene            2148..2747
                     /gene="recR"
                     /locus_tag="VKX24_07415"
     CDS             2148..2747
                     /gene="recR"
                     /locus_tag="VKX24_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012865503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HLJ08350.1"
                     /translation="MYEGPVQTLVDELGRLPGIGPKSAQRIAFHLLRLPSEDAKRLAA
                     AIVEAKERVSWCRRCFNIAEGEQCRYCRDDTRDPTLICVVEDARDIVAVERTREFRGL
                     YHVLGGAISPIEGVGPEQLRIRELLGRLGDEGVKEVILATNPNIEGEATAMYLARLLQ
                     PLGVRVTRIASGLPVGGDLEYADEITLGRAFEGRREVGG"
     gene            complement(2845..>3692)
                     /locus_tag="VKX24_07420"
     CDS             complement(2845..>3692)
                     /locus_tag="VKX24_07420"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HLJ08351.1"
                     /translation="GGMESMTKAPYLLPGARAGYRMGNAELVDSMIHDGLWCAFDAVH
                     MGSGTEKYNGQYQISRQAQDELAAASHERAAAAIKDGRFADEIVPVSVPQRKGDPIVI
                     ENDEGVRPGTTAESLGNLRPAFSKEGTITAGNASQISDGGAAMVVMSKAAAERLGCTP
                     MAELVAYGMVAGPDPSLMLQPANAIRQALGKVGKQVSDVDLFEINEAFAAVGLASMAD
                     LGISDEVVNVNGGAIALGHPIGMSGARIVMTLINELRRRGGGLGAAALCGGGGQGDAA
                     LIRTL"
BASE COUNT          493 a         1355 c         1364 g          480 t
ORIGIN      
        1 caggaggcgg tgtcgacggc gctgcgcaac gccgtccggg agggccgggt cggccacgcc
       61 tacctcttct ccggcccgcg ggggacgggc aagaccacca ccgcccggct gctggccaag
      121 gcgctgaact gcaccggcga ccggtcaacc cttccgcccg gcgagccctg taacgcctgc
      181 ccgtcgtgcg tggagatcac cgccggaacg tcgatggacg tcgtggagct cgacgccgcc
      241 tccaaccggg gcgtcgggga gatgcggtcg ctgctggagc gggtcgccta ccgctcggcc
      301 ggcggggccc ggaaggtcta catcgtcgac gaggtccaca tgctgaccaa ggaggcgtcg
      361 acggcgctgc tcaagacgct ggaggagccg cccgaccacg tcatcttcgt cctggccacc
      421 accgacccgc agatggtcct gccgacgatc cggtcccgca cccagcactt cgagttctcg
      481 ctcctggcgg cagaccgcct cgccgcccac ctggccgaca tcgcgacccg ggagggcgtc
      541 gaggccgatc ccgacgccct ggccatcatc gcccgacggg ccggcggttc ggcccgcgac
      601 gccctgtcgc tcctcgacca ggcgctggcc tacggcgagg gccggctgcg accggagcag
      661 gtcgccgccc tcttcggggg aacggcgacc gccgctcggg gggccatcgt cgacgccctc
      721 gccgccggcg acgtgcccgc cctgctcgaa cggctcgacg ccctgctcgg cgcgggcgtc
      781 gacgcccgca ccctggctga cgacctgctc cgtcacctcc gcgaggtgtt tctcgtcctg
      841 tcgtcccctg gccgggtcag gctcgagacc ccggaggagg accgggccga gctcgccgcc
      901 cagggcgagt ccctcggagc ggccgggatc gtgcgggcgc tcgagaccct cggcgaggcg
      961 gcgatcgaga tccgccgggc tcccgacccc cggctcgtgc tcgaggtgac gctcgtgcgc
     1021 ctcgcccggc gcgacgtcgg cacgatcgag gccctcgccg agcgcctgac ccggctcgaa
     1081 cgggcgctcg acgagctccg ccgagcggcc cggggcggcg cggcatcgcc caccgagccc
     1141 ccgggcgaag ctccccggcc cgcggcccgt ccggggcccc aggcggcgct cggagcgctg
     1201 cggaagagcc cggccccggc cggcgccccg ccgccatcgc cggccgcggc gcccgtaccg
     1261 gacgcggaac cggcgccggt gccggcggcg gagacggccg cggagacggc cgcggagacg
     1321 ccggccgggg cgaaggaggc ggcgatcacg ctggaggacg ccgccgccgc ctggagcaag
     1381 gcggtggagg ggttccggcc ccgcctgaag gccatggcca aggaggccca tccgatccgg
     1441 gtcgacggcg acaccgtcgt ggtcgggctg ccctcgcgct tcgagaaggt ccacctcccg
     1501 acgatcaccg gcgaggcggc cgccgtcacc gccgtcctgt ccgacctgct cggccggccc
     1561 gtccggctga gcgtggtgct cgacgacgac gtgctgtcgc cccaggccgg tccgccaccg
     1621 gcgggcgggc cgccggttga cgtcggtgac ggcggcggcg ccgaggcgat ggcggcggag
     1681 atggcccgtc cgccggagcc ggccggaggg gggcgagggg tagattctcc cgtcggcctg
     1741 gtcatcgaaa cgttcggggc cagcatcgag agcgagaccg tgagggagtg accgtcatgg
     1801 ccagcaagaa cgagatgaac cagatgatga agcaggttca gaagatgcag gccgacatga
     1861 tggccaccca ggagaagctg gcctcggaga cggtcgaagc gtcggtcggc ggcggggtgg
     1921 tcaaggccgt cgtgaccggg tcggggacgc tggagtcgat caccatcgat cccggtgccg
     1981 tcgatcccga cgatgtcgag atgctgcagg acctcatcgt cgccgccgtg aacgaggggc
     2041 tccggctggc ccaggagctg caggcccaga gcttcggggg tatcaccaac gccctcggcg
     2101 gcctcggcgg aggcctcggc ggcctcttcg ggcagtaacc cgccggcgtg tacgagggcc
     2161 cggtccagac cctggtcgac gagctgggcc gcctcccggg catcgggccg aagtcggcgc
     2221 agcgcatcgc cttccacctc ctccgcctcc cgtcggagga cgccaagcgc ctggcggcgg
     2281 ccatcgtcga ggccaaggag cgggtctcgt ggtgccggcg gtgtttcaac atcgccgagg
     2341 gcgagcagtg ccggtactgc cgggacgaca cccgcgatcc caccctcatc tgcgtcgtgg
     2401 aggacgcccg cgacatcgtg gccgtcgaac ggacccggga gttccgcggc ctgtaccacg
     2461 tgctcggcgg ggccatctcg cccatcgagg gcgtcggccc cgagcagctc cgcatccgcg
     2521 agctgctcgg ccgcttgggc gacgagggcg tgaaggaggt catcctggcc accaacccca
     2581 acatcgaggg cgaggccacg gccatgtatc tcgcccggct gctgcagccg ctcggtgtgc
     2641 gggtcacccg gatcgccagc ggcctgcccg tcggcggcga tctggagtac gccgacgaga
     2701 tcaccctcgg ccgggccttc gagggccgcc gcgaagtcgg cggctgacgc ctcccgcgcc
     2761 aaccggcgct cgtttaccgg aatacagcgg aaaacgaacg ccggttgcga ggaggcgggc
     2821 cgccggcggc gggggtccgc ccggctacag cgtccggatc agggcggcgt cgccctgccc
     2881 gccaccgccg cagagggcgg cggcgccgag cccgccgccg cggcggcgga gctcgttgat
     2941 cagcgtcatc acgatccggg cgccggacat gccgatcggg tggccgaggg cgatggcacc
     3001 gccgttgacg ttgacgacct cgtcggagat gccgaggtcg gccatcgagg ccaggccgac
     3061 ggcggcgaag gcctcgttga tctcgaacag gtcgacgtcg gacacctgct tgccgacctt
     3121 gcccagggcc tgccggatgg cgttggccgg ctggagcatg agcgaggggt cgggcccggc
     3181 caccatgccg taggcgacca gctcggccat cggcgtgcag cccagacgct cggcggcggc
     3241 cttgctcatg accaccatgg ccgccccgcc gtcggagatc tgcgaggcgt tgccggccgt
     3301 gatcgtgccc tccttggaga aggccgggcg caggttgccg aggctctcgg cggtcgtccc
     3361 cggccggaca ccctcgtcgt tctcgatcac gatcgggtcg cccttgcgct ggggtaccga
     3421 caccgggacg atctcgtcgg cgaagcgccc gtccttgatg gcggcggccg cccgctcgtg
     3481 gctggcggcg gccagttcgt cctgcgcttg gcggctgatc tggtactggc cgttgtactt
     3541 ctcggtgccc gagcccatgt ggacggcgtc gaacgcgcac cacagcccgt cgtggatcat
     3601 cgagtcgacg agctcggcgt tgcccatccg gtagccggcc cgagccccgg gcagcaggta
     3661 gggggccttg gtcatcgatt ccatcccgcc gg
//
LOCUS       DATGJT010000435         4814 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_784036, whole genome shotgun sequence.
ACCESSION   DATGJT010000435 DATGJT010000000
VERSION     DATGJT010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784036"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /gene="truB"
                     /locus_tag="VKX24_07425"
     CDS             complement(<1..565)
                     /gene="truB"
                     /locus_tag="VKX24_07425"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HLJ08352.1"
                     /translation="MTQGTGGDAVEGLVVVDKPAGCTSHDVVARLRRIYGLRRVGHAG
                     TLDPDATGVLLVGLGRATRLLRFLTETGKVYRGEVAFGVATDTLDAAGAETARRAMPA
                     LSRSQFESVLPRFLGTIEQIPPMVSAIKVEGRRLHERARAGEVVERAPRPVRIDRIEV
                     EAFTAGDFPRATIVVECGSGTYIRSLAA"
     gene            complement(570..1550)
                     /locus_tag="VKX24_07430"
     CDS             complement(570..1550)
                     /locus_tag="VKX24_07430"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HLJ08353.1"
                     /translation="MNEYPGDQQLTDDLATAAALISAAGRVALACHVAPDGDALGSML
                     ALHHVLRGAGRHSVAGFAGTQVTGPHYRELPGLDLLTDPLDYPAEPEVMVTLDCGSLG
                     RLGDLAINAKAAKELIVVDHHLSNTRFGSLHLVDPAAAASAVVVARLIDALGLPLNRD
                     AAVCLYAALVCDTGRFQYESTGTEAFALARRLLEFDVPVARLNRVLFEEHRLAYLRLV
                     GAVLSRAEMVADKSFIWAAVTEADLAEHGVTLEETEGLIDFLRQAKEAEISCVLKEVE
                     GHVRVSLRSLGHVDVSAVAALFGGGGHRFAAGFTTTDPVPRVVETIVQAL"
     gene            complement(1547..1951)
                     /gene="rbfA"
                     /locus_tag="VKX24_07435"
     CDS             complement(1547..1951)
                     /gene="rbfA"
                     /locus_tag="VKX24_07435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HLJ08354.1"
                     /translation="MTHATRRYERTARVNEVVREVLADELERLSDPRLGFVTVTGVEV
                     TPDLRQATVYYSALAPAGADAEAQAEAADETAAALRSATAHLQAEIGRQVRMKYTPHL
                     VFREDPAIRTGERVDEILRRLHSDGEEGEEGQ"
     gene            complement(1956..2249)
                     /locus_tag="VKX24_07440"
     CDS             complement(1956..2249)
                     /locus_tag="VKX24_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018541310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF503 domain-containing protein"
                     /protein_id="HLJ08355.1"
                     /translation="MHAAALRFDLHVPASRSLKAKRAAVRPIVDTLRHRYHVSVAEVD
                     HQDRWQRAAIAVAVVAESNHHLTEVLDTVERFVRSAPDVEVLDTTAAYLDPED"
     gene            2342..3703
                     /locus_tag="VKX24_07445"
     CDS             2342..3703
                     /locus_tag="VKX24_07445"
                     /inference="COORDINATES: protein motif:HMM:NF016190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HLJ08356.1"
                     /translation="MRRVRTAALGLGALPVLLFFLAPAALAAPGGGSGGFGGGGGGGG
                     GGGFGGGGSGGGFGGGGGGTAISGWFWIIVPAFVLFFVFSGSMRARRARGPGRLVRQR
                     REQQVDVAAEEAAMDDAAFAPEAVRAATIALHQAIVEAWTARDRKTLSTLIGPDLMVE
                     WGRRLDDFDRKGWHNITERLAEPTVEYLGLVNREGDRDDRVTVRISAPLRDYVVDRAG
                     RHIMRDDSSTEETNLPEYWTLTRRDDGAWYLLSIEQDAEGGHVLGEAIVARPDEDTAR
                     LHDEAVASVAAAGAVPDSSVHVIAPFSFDGDLRTAALDMANIDGRFDPDVLETSARRA
                     VAAWAEAVDGPDDALAAVATPAAIDELLYDGDTSKGTRLVVRGPVLRSLRIAAIDAHA
                     TPPTMTVNAEVRGRRYREDRDTTTVVAGSKTHEVTFSESWTMALDGQDETPWRLVASN
                     GRA"
     gene            3946..>4814
                     /locus_tag="VKX24_07450"
     CDS             3946..>4814
                     /locus_tag="VKX24_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08357.1"
                     /translation="MSATDFPDPAFRVARGGPTSNDSFRGLRPGAFAAYATGTVFHTD
                     PELTGTKVAATVDMATADAVYAAQDLSPFADELGRSIVSALPAGSGQAQARAVKIDPP
                     DAVGDVATGQPAQAKAPPTAQPDVHETTADLTPLLKANALRAEASARAVSTGCVIGSD
                     LARGTANADQTEIADTNPSATSAKPLLSLAADDPPRAVSQSVSHARLVPIPGQPGRFG
                     AMAEIRQTIAPITFGLPGSDDKFTIEVAGEWVMRAVADGTKGSVTFGSENQNNDDRPA
                     LRIVHGKQVVDEAG"
BASE COUNT          657 a         1714 c         1804 g          639 t
ORIGIN      
        1 cggcggccag gctgcggatg tacgtgccgc tgccgcattc gaccacgatc gtggcccggg
       61 ggaagtcgcc ggcggtgaag gcctcgacct cgatccggtc gatccggacg ggccgggggg
      121 cgcgctcgac gacctccccc gcccgggccc gctcgtgcag gcggcgccct tcgaccttga
      181 tggccgagac catcggcggg atctgctcga tggtgccgag gaagcggggc agcacggact
      241 cgaactgcga gcgggagagc gcgggcatgg cgcggcgggc ggtctcggct ccggcggcgt
      301 cgagcgtgtc ggtggccacc ccgaaggcga cctcgccccg gtagaccttg ccggtctcgg
      361 tcaggaagcg cagcaggcgg gtggcccggc cgaggcccac gaggaggacg ccggtggcgt
      421 cggggtcgag cgtgccggcg tggccgaccc gccgcaggcc gtagatgcgc cggaggcggg
      481 cgacgacgtc gtgcgacgtg cacccggcgg gcttgtcgac gacgacgagg ccctcgacgg
      541 cgtccccgcc cgtcccctgg gtcatgggct cagagcgcct ggacgatcgt ctccaccacc
      601 cgggggacgg gatcggtggt cgtgaagccg gcggcgaagc ggtggccgcc gccgccgaac
      661 agcgcggcca cggccgacac gtccacgtga ccgagcgagc ggaggctgac ccgcacgtgg
      721 ccctcgacct ccttgaggac gcaggagatc tcggcctctt tggcctggcg gaggaagtcg
      781 atgagaccct cggtctcctc cagcgtcacg ccgtgctcgg ccaggtcggc ctcggtgacc
      841 gccgcccaga tgaagctctt gtcggccacc atctcggccc ggctgaggac ggcaccgacg
      901 agccggaggt aggcgaggcg gtgctcctcg aacaggacgc ggttgagccg ggcgacgggg
      961 acgtcgaact ccagcagccg ccgggcgagg gcgaaggcct cggtgcccgt gctctcgtac
     1021 tggaagcggc cggtgtcgca gacgagggcg gcgtagaggc acaccgcggc gtcgcggttg
     1081 agcgggaggc cgagggcgtc gatcaggcgg gcgacgacga cggcgctggc cgccgccgcc
     1141 gggtcgacga ggtggaggga tccgaaccgg gtgttggaga ggtggtggtc gacgacgatg
     1201 agttccttgg ccgccttggc gttgatggcc aggtcgccga ggcgcccgag cgacccgcag
     1261 tcgagggtga ccatcacctc cggctcggcc gggtagtcga gggggtcggt gagcaggtcg
     1321 aggccgggca gctcccggta gtggggcccg gtcacctggg tgccggcgaa gccggccacc
     1381 gagtggcggc cggcgccccg gagcacgtgg tggagcgcca gcatcgagcc gagggcgtcg
     1441 ccgtcggggg cgacgtgaca ggccagggcg acccggccgg cggcgctgat gagcgcggcg
     1501 gcggtggcca ggtcgtcggt cagctgttgg tccccgggat actcgttcac tggccttctt
     1561 cgccctcttc accgtcggag tggagccggc ggaggatctc atcgacccgc tcccccgtcc
     1621 tgatcgccgg atcctcgcgg aaaacgaggt gtggcgtgta cttcatccgg acctgccggc
     1681 cgatctcggc ctggaggtgg gcggtggcgg accgcagggc cgcggccgtc tcgtccgccg
     1741 cctcggcctg cgcctcggcg tcggcgccgg ccggcgcgag ggccgaatag tagacggtgg
     1801 cctggcgcag gtcgggggtg acctccacgc cggtgacggt gacgaacccg agccgggggt
     1861 ccgacagccg ctcgagctcg tcggcgagca cctcccgcac cacctcgttg acccgggcgg
     1921 tgcgctcgta gcgccgggtg gcgtgcgtca tcgcttcagt cctccgggtc gaggtaggcc
     1981 gccgtcgtgt cgaggacctc gacatcgggg gcggaccgga cgaaccgttc gacggtgtcg
     2041 agcacctcgg tcaggtggtg gttgctctcg gccaccaccg ccacggcgat ggccgcccgc
     2101 tgccaccggt cctgatggtc gacctcggcc accgacacgt ggtaccggtg ccggagcgta
     2161 tcgacgatgg gccggacggc ggcccgcttc gccttgaggg accggctcgc cggcacgtgg
     2221 aggtcgaagc gcagggcggc cgcgtgcacg gtcccatttt ggcggcccgg cggcggcgat
     2281 acgaacggtg ggccggaacg tccctggacc gtattaccgc ccgcccatag gctcgctttc
     2341 cgtgcgaagg gtgcgaaccg ccgccctcgg gctgggggcc cttccggtgc tgctgttctt
     2401 cctcgccccg gcggcgctcg ccgcccccgg gggcgggtcg ggcggtttcg gcggcggcgg
     2461 cggcggcggg ggcggcggcg gcttcggcgg gggcgggagc ggcggcggct tcggcggcgg
     2521 aggtggcgga accgccatct cgggatggtt ctggatcatc gtcccggcct tcgtcctctt
     2581 cttcgtcttc agcggctcga tgagggcgag gcgggcgagg ggacccgggc ggctcgtgcg
     2641 ccagcgacgg gagcagcagg tggacgtggc cgccgaggag gccgccatgg acgacgcggc
     2701 cttcgccccc gaggcggtga gggccgccac gatcgcgctg caccaggcga tcgtcgaggc
     2761 gtggacggcc cgggaccgga agacgctgtc gaccctcatc ggccccgacc tgatggtgga
     2821 gtggggccgc cgcctcgacg acttcgaccg caagggctgg cacaacatca ccgaacgcct
     2881 cgccgagccg acggtggagt acctcgggct ggtcaaccgg gaaggcgacc gcgacgaccg
     2941 cgtgaccgtc cgcatcagcg ctccgctgcg ggactacgtc gtcgaccggg cgggccgcca
     3001 catcatgcgc gacgactcgt ccaccgagga gacgaacctg cccgagtact ggaccctgac
     3061 ccggcgcgac gacggcgcct ggtacctgct ctcgatcgag caggacgccg agggcggcca
     3121 cgtgctcggc gaggcgatcg tggcccggcc cgacgaggac acggcccggc tccacgacga
     3181 ggccgtggcg tcggtggccg ccgccggcgc cgtccccgac tcctccgtgc acgtcatcgc
     3241 cccgttctcg ttcgacggcg acctgcggac ggcggcgctc gacatggcca acatcgacgg
     3301 ccgcttcgac cccgacgtcc tcgagacctc ggcccgccgg gccgtcgccg cctgggccga
     3361 ggcggtggac gggcccgacg acgccctggc cgccgtcgcc accccggccg ccatcgacga
     3421 gctcctctac gacggcgaca cctccaaggg gacgcggctg gtcgtgcgcg ggcccgtcct
     3481 ccggtcgttg cggatcgccg ccatcgacgc ccacgccacg ccgccgacga tgaccgtcaa
     3541 cgccgaagtc cggggccggc gctatcgcga ggaccgggac acgaccacgg tcgtggccgg
     3601 tagcaagacc cacgaggtga ccttcagcga atcgtggacg atggccctcg acggtcagga
     3661 cgagacgccg tggcggctgg tcgcctcgaa cgggcgggcc tgagccgaca acactgattc
     3721 acgagctggg ctcgtcggcc catcggggtg gccccagcgc gctgcatgcg ggagacttgc
     3781 ggcatgtcac gacgattcgg gcccgtcctg gcaacaacct cggtcgccgc gctcctctgg
     3841 tgcgggagcg cggccggagc ggctccgtct gcggccacgg gacccgccca acgggcgcgg
     3901 cgagcctcga taccacacgc cctccaccgg gtttcgttgc ggccggtgtc tgcgaccgac
     3961 tttccggacc cggcgttccg cgtagcgcgg ggcggcccga cctcgaacga ctccttccgt
     4021 gggctccgcc cgggcgcctt cgccgcctac gccacgggga cggtcttcca caccgacccg
     4081 gagctgaccg gaaccaaggt tgccgccacc gtcgacatgg ccaccgccga cgccgtctac
     4141 gccgcccagg atctgtcgcc gttcgccgac gaactcgggc gttccatcgt ctcggcgctg
     4201 ccggccggaa gcggacaggc gcaggcccgc gccgtgaaaa tcgacccgcc cgacgccgtc
     4261 ggagacgtgg ctaccgggca acccgcccag gccaaggcgc ctccgaccgc ccagccggac
     4321 gttcacgaga caacggcaga cctcaccccc ctcctcaagg ccaacgcatt gcgcgccgaa
     4381 gcgtcagccc gtgccgtttc gacgggttgc gtcatcggca gcgatctcgc ccgcggcacg
     4441 gcgaatgccg accagacgga gatcgccgac accaacccgt cggccacgag cgccaagccg
     4501 ttgctctcgc tggcggccga cgatcctccc cgggcggtgt cgcagtccgt ctcgcacgcc
     4561 cgcctcgttc ccatccctgg ccagccgggg cgcttcggag cgatggcgga gatccgccag
     4621 acgatcgcac cgatcacctt cgggctgccg ggctccgacg acaaattcac catcgaggtg
     4681 gccggtgaat gggtgatgcg agcggtggcc gacggtacca agggttcggt gaccttcggg
     4741 tcggagaacc agaacaacga cgaccgtccc gcgctgcgga tcgtccacgg caagcaggtc
     4801 gtcgatgagg cggg
//
LOCUS       DATGJT010000436         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_266174, whole genome shotgun sequence.
ACCESSION   DATGJT010000436 DATGJT010000000
VERSION     DATGJT010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266174"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VKX24_07455"
     CDS             complement(<1..764)
                     /locus_tag="VKX24_07455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08358.1"
                     /translation="MSGPGTPPDLFDAEAEAAGRPRGASRVLRRAWARAIVPAIPRRR
                     PAPSVGPEPRRAGWTRVLGVCLLGFVVWLVLDAPTLQHNAQVSPVGARRTVSLAILGP
                     IATVSRDLGLSHVVSVADGILGRNGNRPGNGIAASRPPRRPRSTVTTTTVPPVVLNRH
                     PTAADPLRVLVVGDSLGIDLGSVLVNDLDATGVVQATLDGQVSTGLTRPDYFDWPAEL
                     ADDLPKYTPQVVVVMLGANDAQDLPGPPDVPFGTAS"
     gene            complement(793..2223)
                     /locus_tag="VKX24_07460"
     CDS             complement(793..2223)
                     /locus_tag="VKX24_07460"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HLJ08359.1"
                     /translation="MLFPTIDFALFFLVAFVTSWLLNPYPVAWKLATIALSYFFYSWW
                     DWRFVFLLLAATVLAHLGARGAATRERSPRAAKAWMIGSLVGLLGLLGYFKYYGFFAV
                     NVDNVLHSMGAGRLVPLVQPTLPVAISFFTFMAISYVVDVYRGRLEVARPVDLATYLC
                     FFPHLIAGPIVRGEELLPQLRRRRDPAEVGFSRAIWMIMAGLFKKVVVSSYVSTAIVQ
                     PVFSAPSGHSAPEVVFAAWGYAVQIYCDFSGYTDIAIGLALLLGVRFPVNFDAPYTAR
                     NLQDFWRRWHITLSRWLRDYLYIPLGGNRGSDAFVVRNLMITMVLGGLWHGANWTFVV
                     WGALHGVGQSVGHLRRRWRVSRGLPAVAEGALRSTFQRFWTFQYVCLGWVFFNATSFS
                     NAMSILGRLFTGWGTASPLITPLLVLVIIGTVEAQFVPRGLLRNLQRVFSEQRALVQA
                     GVLAAILLGVTTLGPTGVAPFIYYRF"
BASE COUNT          398 a          796 c          928 g          270 t
ORIGIN      
        1 caggaggcgg tcccgaaggg gacgtcgggg gggcccggca ggtcctgggc gtcgttggcg
       61 cccagcatca cgaccaccac ctggggggtg tacttgggca ggtcgtcggc cagctcggcc
      121 ggccagtcga agtagtccgg ccgggtgagc ccggtcgaga cctggccgtc gagcgtggcc
      181 tggaccaccc cggtggcgtc gaggtcgttc acgaggacgc tgcccaggtc gatgccgagc
      241 gagtcgccga cgacgagcac ccgcagcggg tcggccgccg tcgggtgccg gttgaggacg
      301 accggcggca ccgtcgtggt ggtcacggtc gacctcggcc gccgcggcgg cctcgaggcg
      361 gcgatcccgt tgcccggccg gttcccgttc cgcccgagga tcccgtcggc caccgacacg
      421 acgtggctca ggccgaggtc gcggctgacg gtggcgatgg ggccgagaat ggcgagggag
      481 accgtccggc gggcgccgac cggggagacc tgggcgttgt gctgcagcgt cggcgcgtcg
      541 aggaccagcc agaccacgaa gccgagcagg cacaccccga gcacccgggt ccaacccgcc
      601 cgccggggct cgggccccac gctcggggcg gggcggcgcc gggggatggc cggcacgatc
      661 gccctcgccc aggcgcggcg cagaacccgg gacgccccgc ggggccggcc ggccgcctcc
      721 gcctcggcgt cgaagaggtc ggggggggtc cccggcccgc tcatctgccg cctcctcggg
      781 cccgggacgc catcagaagc ggtagtagat gaacggggcc acgccggtcg ggccgagggt
      841 ggtgacgccg aggaggatgg ccgccagcac gcccgcctgg acgagcgccc gctgctcgga
      901 gaacacccgc tggaggttcc ggagcaggcc gcggggcacg aactgggcct cgacggtgcc
      961 gatgatgacg agcacgagca gcggggtgat gagcggtgag gccgtccccc agccggtgaa
     1021 caggcggccg aggatggaca tggcgttgga gaacgacgtg gcgttgaaga acacccagcc
     1081 gaggcacacg tactggaacg tccagaaccg ctggaacgtc gagcgcaggg cgccctcggc
     1141 gacggccggc agcccccgcg agacgcgcca ccggcgccgc aggtggccga cgctctggcc
     1201 cacgccgtgc agcgcgcccc agacgacgaa ggtccagttg gccccgtgcc agaggccccc
     1261 cagcaccatg gtgatcatga ggttgcggac gacgaaggcg tccgagccgc ggttgccccc
     1321 gagggggatg tacaggtagt cgcgcagcca gcgggacagg gtgatgtgcc agcgccgcca
     1381 gaagtcctgc aggttgcgcg ccgtgtaggg cgcgtcgaag ttgaccggga agcgcacccc
     1441 gagcaggagg gcgagcccga tggcgatgtc ggtgtagccg ctgaagtcgc agtagatctg
     1501 caccgcgtag ccccaggcgg cgaagaccac ctcgggagcg gagtggccgc tcggcgcgct
     1561 gaacacgggc tggacgatgg ccgtcgacac atacgaggag acgacgacct tcttgaagag
     1621 cccggccatg atcatccaga tggcccggga gaagccgacc tcggccgggt cgcgcctccg
     1681 gcgcagctgc gggaggagct cctcgccgcg cacgatcggc ccggcgatca ggtgggggaa
     1741 gaagcacagg taggtcgcga ggtcgacggg gcgggccacc tcgaggcggc cccggtagac
     1801 gtcgaccacg tagctgatgg ccatgaaggt gaagaacgag atggcgacgg gcagggtcgg
     1861 ctggaccagg ggcaccagcc gccctgcgcc catggagtgg agcacgttgt cgacgttgac
     1921 ggcgaagaag ccgtagtact tgaagtagcc gagcagcccg agcaggccga cgagggagcc
     1981 gatcatccag gccttggccg cccgggggct ccgctccctc gtggccgcgc cccgcgcccc
     2041 gaggtgggcg agcaccgtcg ccgccagcag caggaacacg aagcgccagt cccaccagct
     2101 gtagaagaag tagctgaggg cgatagtggc cagcttccag gccaccgggt aggggttgag
     2161 cagccaactc gtcacgaagg cgacgagaaa gaagagcgcg aagtcgatgg tcgggaagag
     2221 catggggcgg cgctccgagc gagcgtactg cccggttcgc tcaccccagc cggcacaagg
     2281 ggcgcggccg accgccgctc ccgcgtcgtc ccagctgacg gcgccgttac cggttcttga
     2341 gggcctcgat gagcgcgggc aggaccttgt ggacgtcgcc cacgatgccg ag
//
LOCUS       DATGJT010000437         3117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_370493, whole genome shotgun sequence.
ACCESSION   DATGJT010000437 DATGJT010000000
VERSION     DATGJT010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370493"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VKX24_07465"
     CDS             complement(<1..288)
                     /locus_tag="VKX24_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010227440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HLJ08360.1"
                     /translation="MPELIAQPARVEAAGNLPKVIEEFVGRVNTATAGVSIARMTSPS
                     GWEEPGQTPEFDEYTVVLRGLLVVEHAGGRLEVRAGQAVHTAPGEWVRYSSP"
     gene            complement(316..618)
                     /locus_tag="VKX24_07470"
     CDS             complement(316..618)
                     /locus_tag="VKX24_07470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08361.1"
                     /translation="MSTTAIRGLLEEGERVLAEDVVEGPLGKPCPLVVTSRAFYLSVG
                     GRYTRYPYGRVRAATFDTHDIFIALEGQTVRLRYRPSTHHSEALQALRRQVALARL"
     gene            complement(615..1544)
                     /locus_tag="VKX24_07475"
     CDS             complement(615..1544)
                     /locus_tag="VKX24_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018656901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HLJ08362.1"
                     /translation="MQSDPGTRLTLGQLRTFLAVASTGSVRGAAEQLVVTQPAVSSAL
                     AAVRRQVGVALVMRDGRGLRLTPAGEALAERARAALALLDEAVAAARGEADPERGRLR
                     LAAVTTAGEHLAPPLLATFLDAHPGAAVSLEVGNRRRMADLLSHHEVDLAIGGRPPPG
                     AQTLAVKPNRLLVVSSPTRAPGRRRTFRTVATGHLESATWLLREPGSGTRSTAEAFLD
                     AVGISPRILTLGSNGAVVESVRIGLGVTMISADAVAGHLAAGRLEEWRHPGLPVERPW
                     HLLARAGEPLAPTPERFLAHVLRSGWERPISGP"
     gene            1616..3049
                     /locus_tag="VKX24_07480"
     CDS             1616..3049
                     /locus_tag="VKX24_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="form I ribulose bisphosphate carboxylase large
                     subunit"
                     /protein_id="HLJ08363.1"
                     /translation="MQSADRLQAGVIPYAKMGYWQPDYEPKATDILAAFRITPQAGVD
                     PEEAGAAVAGESSTATWTVVWTDRLSAYEHYQAKCYRVDPVPGQDGQYMAYIAYDIDL
                     FEEGSIANLTSSIIGNVFGFKALKALRLEDLRIPTHYVKTFPGPPHGIVMEREHLNKY
                     GRPLLGATVKPKLGLSARNYGRVVYEALRGGLDFTKDDENINSQPFMRWRDRFLFCME
                     AVHRAEEMTGEIKGHYMNVTAATMEDMYERAEFARDIGSVIIMQDLTIGYTAMASMSK
                     WARKNGMLLHLHRAGYATWARQKNHGVNFRVIAKWCRLLGVDHIHAGTVVGKLEGDPN
                     IIRGYYDTLRLEHIDADLTKGLYFDQDWASMPGVMPVASGGIHAGQMHQLLHYLGEDV
                     VLQFGGGTIGHPMGIAAGATANRVALEAMVKARNEGRDYFTQGRDILNAAAKGCPELQ
                     VALDTWGDITFNYESTDTPDVVATPSA"
BASE COUNT          487 a         1123 c         1106 g          401 t
ORIGIN      
        1 cggggagctg tagcggaccc actcgccggg agcggtgtgg acggcctgcc cggcccggac
       61 ctcgagccgt ccgccggcgt gctccaccac cagcagcccc cggaggacca cggtgtactc
      121 gtcgaactcc ggcgtctggc ccggctcctc ccagccggag gggctcgtca tgcgggcgat
      181 gctgaccccg gcggtggccg tgttgacccg gccgacgaat tcctcgatga ccttgggcag
      241 gttgccggcg gcctcgaccc gggccggctg cgcgatcagc tcaggcatgg gccgcagctt
      301 ggcagacgcg gcgccttaca gccgggcgag ggccacctgg cggcgcagcg cttggagcgc
      361 ctcgctgtgg tgggtgctcg ggcggtaccg cagccggacg gtctggccct cgagggcgat
      421 gaagatgtca tgggtgtcga acgtcgccgc tcgcacccgg ccgtaggggt agcgggtgta
      481 gcgcccgccg acgctcaggt agaacgccct cgacgtcacg accagcgggc acggcttgcc
      541 cagggggcct tcgacgacgt cctcggccag gacgcgctct ccctcttcca gcagtccgcg
      601 gatcgccgtc gtgctcacgg ccccgatatc ggccgctccc agcccgatct gaggacatgg
      661 gccaggaacc gctccggggt gggggccaac ggctccccgg cccgggccag caggtgccag
      721 ggccgctcga cggggaggcc ggggtggcgc cattcctcca gccggccggc ggcgaggtgc
      781 ccggccacgg catcggccga gatcatcgtg acgccgagcc cgatccggac gctctccacc
      841 actgcgccgt tcgaacccag cgtcaggatg cggggcgaga tccccacggc gtcgaggaac
      901 gcctccgccg tcgaccgggt gcccgagccc ggctcccgca gcagccacgt ggccgactcg
      961 aggtgcccgg tggcgacggt gcggaacgtc cgccggcggc ccggcgcccg ggtgggggac
     1021 gagaccacga gcaggcggtt cggcttgacc gccagcgtct gggcacccgg cggggggcgg
     1081 ccgccgatgg ccaggtcgac ctcgtgatgg gagagcaggt cggccatgcg gcggcggttg
     1141 ccgacctcga gggacaccgc cgccccggga tgggcgtcca ggaacgtggc cagcagggga
     1201 ggagcgaggt gctcgccggc cgtcgtcacc gccgccagcc gcagccggcc ccgctcgggg
     1261 tcggcctccc cccgggcagc ggccacggcc tcgtcgagca gggccagggc cgcccgggcc
     1321 cgctccgcca gcgcttcgcc ggccggcgtc aggcgcaggc cccgcccgtc ccgcatgacc
     1381 agcgccacgc ccacctggcg ccggacggcg gccagcgccg acgacaccgc cggctgcgtc
     1441 accaccagct gctcggcggc gccccgcacg gacccggtcg aggccacggc caggaacgtg
     1501 cgcagctggc cgagtgtgag gcgggtcccg gggtccgact gcataagtga acgctgatgt
     1561 atgacgcccg aactgtcaat agacactggg ggttgtgggg cgcaggatcg ggggcatgca
     1621 gagcgcagac cgcctccagg ccggagtcat cccctacgcc aagatgggct attggcagcc
     1681 cgactacgaa ccgaaggcga ccgacatcct cgccgccttc cgcatcacgc cccaggccgg
     1741 cgtcgacccg gaggaggcgg gggcggccgt ggcgggcgag tcctcgaccg ccacgtggac
     1801 ggtggtgtgg accgaccgcc tctcggccta cgagcactac caggccaagt gctaccgggt
     1861 ggatccggtc ccgggccagg acgggcagta catggcgtac atcgcctacg acatcgatct
     1921 cttcgaggag gggtcgatcg ccaacctgac gtcgtcgatc atcggcaacg tcttcggctt
     1981 caaggccctc aaggccctgc ggctggagga tctgcgcatc ccgacccact acgtgaagac
     2041 gttccccggc ccgccccacg gcatcgtcat ggagcgcgag cacctcaaca agtacggccg
     2101 tccgctgctc ggcgccacgg tgaaacccaa gctgggtctc agcgcccgca actacggccg
     2161 ggtggtgtac gaggcgctgc ggggcgggct cgacttcacc aaggacgacg agaacatcaa
     2221 cagccagccg ttcatgcgct ggcgcgaccg gttcctgttc tgcatggagg ccgtccaccg
     2281 ggccgaagag atgaccggtg agatcaaggg ccactacatg aacgtgaccg ccgccaccat
     2341 ggaggacatg tacgagcggg cggagttcgc ccgcgacatc ggcagcgtca tcatcatgca
     2401 ggacctcacc atcggctaca cggccatggc ctcgatgtcg aagtgggccc gcaagaacgg
     2461 gatgctgctc cacctccacc gggcgggcta cgccacctgg gcccggcaga agaaccacgg
     2521 cgtcaacttc cgggtcatcg ccaagtggtg ccggctgctc ggcgtcgacc acatccacgc
     2581 cgggacggtg gtcggcaagc tggagggcga ccccaacatc atccgggggt actacgacac
     2641 gctgcgcctg gagcacatcg acgccgacct gaccaagggc ctctacttcg accaggactg
     2701 ggcgtcgatg cccggggtca tgccggtggc gtcgggcggt atccacgccg gccagatgca
     2761 ccagctgctg cactacctgg gcgaggacgt cgtcctccag ttcggcggcg gcaccatcgg
     2821 ccaccccatg gggatcgccg ccggcgccac cgccaaccgg gtcgccctgg aggccatggt
     2881 caaggcccgc aacgagggac gcgactactt cacccagggg cgcgacatcc tgaatgccgc
     2941 agccaagggt tgccccgagc tgcaggtggc cctcgacacc tggggcgaca tcaccttcaa
     3001 ctacgagtcg accgacacgc ccgacgtcgt ggcgacgccg agtgcctgag atgggcctct
     3061 gacatgcgct tcggggaggc gccgccgcgg aacggggcgc cgccgaatgg tgtagcg
//
LOCUS       DATGJT010000438         2862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_576675, whole genome shotgun sequence.
ACCESSION   DATGJT010000438 DATGJT010000000
VERSION     DATGJT010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_576675"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..628
                     /locus_tag="VKX24_07485"
     CDS             158..628
                     /locus_tag="VKX24_07485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08364.1"
                     /translation="MPYTFLSPEWIDTAEQIYERHRHHVAGRGFPALVVNFVVSGAPF
                     GAGDVEAHTDTTSGDMLIRRGRAATADLTFRLDYDTARSLVVDQDPQLAIEALILGRI
                     RIEGDLAALSAKTDLDVTQLPVLLTSLNLGGIAGLTDVDPVAARIAGELRDITA"
     gene            complement(842..1552)
                     /locus_tag="VKX24_07490"
     CDS             complement(842..1552)
                     /locus_tag="VKX24_07490"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HLJ08365.1"
                     /translation="MRPGLSAGRHEHRRRTNWLRDVILGGQDGLVNILGIILGVIAGG
                     GSRAVLLSAGFAAAITESISMGAVGYTSSVAERDYYEAERAREAAEVRAEPEWERNEL
                     RKIYARMGFSGDVLDRVVDTITANRETWVGTIMDQELHLQPVDEPDILRSAVVITAAT
                     LISHLIPLLPFVWLARTPAMVAAIVLSALVLFGVGVYSSVTLVGDWRKNGPKMVAIGL
                     GAAAVGFLVGRLFHTAGA"
     gene            complement(1552..2223)
                     /locus_tag="VKX24_07495"
     CDS             complement(1552..2223)
                     /locus_tag="VKX24_07495"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HLJ08366.1"
                     /translation="MDVASRHAEWIAEWLGPADLAPLAPDDIRDLVVLLREDHYPAGS
                     TVFRMGQAPTRVHIVRRGAIELSRNMKSGRVVIQILRPGDVLGDISLFLRMKVPWDAV
                     ALEDSLILSIDSLSLHRLLEQRPRLAWRWLHSVSTRVAGFWFRVVELLAGGLEAQVAS
                     VLVRRAEDGVVHLSQNNLAELVGHRRTSVNRVLKRLEADGLVRVGYGQVELLDEDGLL
                     KVAGL"
BASE COUNT          493 a          996 c          955 g          418 t
ORIGIN      
        1 ggcgtcatcc agtccctttc caataaatcc gactcaccgt aggtttctac tgttcgcgct
       61 gtcaagcgtg gcgtagaatc cctgcgcggc aaccggcccg gtgcgccggc ggtcacaccg
      121 ggaccagccg tgaaaacccg accaggagta gacgaaggtg ccctacacct ttctcagccc
      181 ggaatggatc gacacggcgg agcagatcta cgaacggcac cgccaccacg tcgccggccg
      241 gggcttcccc gcgctcgtcg tcaacttcgt ggtcagcggc gctccgttcg gcgcgggcga
      301 cgtcgaggcg cacaccgaca cgacgtcggg cgacatgctc atccggcggg gccgggccgc
      361 caccgccgac ctgaccttcc ggctcgacta cgacacggcc cgctcgctcg tggtcgacca
      421 ggacccgcag ctggcgatcg aggcgctcat cctcggccgg atccggatcg agggcgacct
      481 ggccgccctg tcggccaaga ccgacctcga cgtcacccag ctccccgtcc tcctcaccag
      541 cctgaatctc ggcggcatcg ccggcctgac cgacgtcgac cccgtggcgg cccgcatcgc
      601 cggggagctc cgcgacatca ccgcctgagc gggtcccggc ttccttcggc gcccgcgggg
      661 cgacgaaaaa tgcccagcga caacaagccg caccgcatcg gcccgacgcc gttcggcggt
      721 cccactgacc tcggcgatgt cctgcccttc tacaacgccg cttccagccg cgcttcaccg
      781 atgccgacct cgacgacctg accgagttcc tgctgtccct gtagggcgcc tgccgtgccg
      841 gtcaggcgcc ggcggtatgg aacaggcggc cgacgaggaa cccgacggcg gcggcgccga
      901 ggccgatggc caccatcttc ggtccgttct tgcgccagtc gccgacgagc gtgaccgagg
      961 agtagacgcc gaccccgaag aggacgaggg cgctgagcac gatcgccgcc accatggccg
     1021 gcgtccgggc cagccagacg aacgggagca gcgggatcag gtggctgatc agggtggccg
     1081 cggtgatcac caccgcactg cggaggatgt cgggctcgtc gaccggctgg aggtggagct
     1141 cctggtccat gatcgtgccg acccacgtct cccggttggc ggtgatcgtg tcgacgaccc
     1201 ggtcgaggac gtcgccggag aaccccatgc gggcatagat cttccggagc tcgttccgct
     1261 cccactccgg ctcggcccgg acctcggccg cctcccgggc ccgctcggcc tcgtagtagt
     1321 cccgttcggc gaccgacgac gtgtagccga cggcccccat cgagatcgat tcggtgatcg
     1381 cggcggcgaa ccccgccgac agcagcacgg cccgggaccc gccgccggcg atgacgccga
     1441 ggatgatccc gaggatgttc accaggccgt cctggccgcc gaggatgacg tcgcgcagcc
     1501 agttggtccg gcggcggtgt tcgtgccggc cggcggagag gccggggcgc actacagccc
     1561 ggccaccttc aggaggccgt cctcgtcgag gagctcgacc tgcccgtagc ccacccggac
     1621 gaggccgtcg gcctccaggc gcttgaggac gcggttgacg ctggtgcggc gatggccgac
     1681 cagctccgcc aggttgttct ggctgaggtg gacgacgccg tcctcggccc ggcggacgag
     1741 caccgaggcc acctgggcct cgaggccgcc ggcgaggagc tccaccaccc ggaaccagaa
     1801 gcccgccacc cgggtcgaga cggagtgcag ccaacgccag gcgaggcggg gccgctgctc
     1861 gagcagccgg tggagactga gcgagtcgat cgacaggatg aggctgtcct ccagcgccac
     1921 ggcgtcccag gggaccttca tccgcaggaa cagcgagatg tcgccgagga cgtcgccggg
     1981 tcgcaggatc tggatcacga cccgcccgct cttcatgttg cgggaaagtt cgatggcgcc
     2041 ccgccgcacg atgtggaccc gggtcggggc ctggcccatc cggaacaccg tcgagcccgc
     2101 cgggtagtgg tcctcccgga gcaggacgac caggtcgcgg atgtcgtcgg gcgccaacgg
     2161 cgcaaggtcg gcgggaccca gccactcggc gatccactcg gcgtgtcggg aggcgacgtc
     2221 cacgggcacc atgatggcgc ggggtggctc gccgagccgg gtcagggagt aggtgtaccc
     2281 ggccccatga cacgtgccga acgcctattc agcaccatgc catcgggccg ggcatcacct
     2341 gagagggaag ctgctggtgc gccggccggc ctgtgggaac accatcggac ttggtgttcg
     2401 gctaacggtc ggcgaccgag acaaacataa caatacggtg cgatttgtca cggcggtctg
     2461 tcgcgaaacg cacgatcaac tctcagagtg tcgcggagcg cacaatcgca gtgattgtcg
     2521 caaatagcac acttcggcga tgagatccct gtgaaatcaa cggcctcgcc gacgagattc
     2581 cacgacttca tgccgggtgg gaaagtttcc gttgcatgac gtgtccggaa caggcagttt
     2641 gtcccccgcg gcccgaatgg gtcgcagctc aggctgcatc agagacagaa ccaccaaagg
     2701 agtgctggtc catccaacca gcccgcagct agctagtcaa cttgagacta ttcaccaaga
     2761 gcggatcgtc gtcaaggtgg ctagccgaac gaatcacttg gagggagcac tgaatgaagg
     2821 ctcttgagac tcctgttgga cgtcgccaag tcctgaaagg ct
//
LOCUS       DATGJT010000439         3138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_680577, whole genome shotgun sequence.
ACCESSION   DATGJT010000439 DATGJT010000000
VERSION     DATGJT010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680577"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2475)
                     /locus_tag="VKX24_07500"
     CDS             complement(<1..2475)
                     /locus_tag="VKX24_07500"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HLJ08367.1"
                     /translation="MAGLSIAGAVTVVVASPPAPAGADVAASSSTTDTAAAGLSPVSD
                     TTATTAAAPTTDPTDTTTTTEASTTTTTWGVGGSPTAVPGAAPSGPAAPAQGVLFGAH
                     VKTGSSASAQKTGVEALEAKLGRKLAIDHYYHPWTDPFPTTREQWDFDNGRIPMISWA
                     KTYADQIVSGAQDAFIRQRADAIAALAQPLFIRWFWEMDGNRNLQYSESPALYIAAFQ
                     HIVTLFRQEGATNVSWVWCPNASGFSDRSAQQYYPGDGYVDWVCSDGYDWYMKPGQSD
                     TSFKNVFKSFYAWAVTTGKPIMVGEYGVMDAGAVDRKANWVDAARTTLKTDDTAIDAV
                     VYFNSYGNDDNGVYHDWTMDSSDASLNAFALMGADPYFNGGPPVPTPDTTITATSGPT
                     GATRTTSASFTFSSDQPGATFACRLDGAAFSFTPCTSPFSGTGLADGAHTFEVRATTA
                     GGTDPTAASRTWTVDTTGPTVTGLSPSDNATSVARNATVSATFSEPVDPTTVSKANFT
                     LTAPGGIAVAATVAYSAATQTATLTPSAPLAFNATYTVTVVGGPTGLADVLGNRMTAN
                     RVWHFTSIPPPPVPNTFLSSGPADPSASPSARLTFSSDQSNAAFQCQLDGGAFAACTS
                     PVSLTGLADGSHTFAVEAWTIDGGTDPTPAAVTWRVDTAPPTVAGTVPAAGATGVALG
                     SAVTATFSEDVDPATVTTASFSLAPAGGTAVPAAVTYDATQDTATLTPTAPLAQGSAY
                     TVTVSGGPSGVADVAGNRLAANRTWSFSSWAPVPDTTLDPASGPLGTVRATSASFTFS
                     SDQPGAAFQCSLDGGPASACTSPWTTA"
     gene            complement(2671..>3138)
                     /gene="hemG"
                     /locus_tag="VKX24_07505"
     CDS             complement(2671..>3138)
                     /gene="hemG"
                     /locus_tag="VKX24_07505"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HLJ08368.1"
                     /translation="DDVGTAPAGYGFVVPRAEGRHLLAATWGSAKWPGRAPPGQVLVR
                     GYVGGVGREAVLEADDDGLVHLVRAELAALAGIRGTPVHREVHRYPAGMPQYTVGHLG
                     RVERIRQALAACPGVAVTGAAYGGVGIPDCIADAQATARAVLAGLGPPDEGTR"
BASE COUNT          396 a         1031 c         1276 g          435 t
ORIGIN      
        1 ggcggtagtc cacggcgacg tgcaggccga ggccggcccg ccgtcgaggc tgcactggaa
       61 ggccgccccg ggctggtcgg aggagaaggt gaacgaagcc gacgtcgccc gcacggtgcc
      121 caacggcccg gaggccggat cgagcgtcgt gtcgggcacc ggcgcccagc tgctgaagct
      181 ccacgtccgg ttggcggcca gtcggttgcc ggcgacgtcg gccactccgc tcggcccgcc
      241 cgacaccgtc acggtgtagg cgctgccctg ggccagtggt gccgtcggcg tcagcgtcgc
      301 cgtgtcctgg gtggcgtcgt aggtcaccgc cgccgggacg gcggtgccgc cggccggggc
      361 cagggagaac gacgccgtgg tgaccgtggc cgggtcgacg tcctccgaga aggtggcggt
      421 caccgcgctc ccgagggcga cgccggtggc gccggcggcc ggaacggtgc cggcgaccgt
      481 cggcggcgcg gtgtccaccc gccaggtgac ggcggccggc gtggggtcgg tgccgccgtc
      541 gatcgtccag gcctcgacgg cgaaggtgtg cgacccgtcg gccagcccgg tcagcgagac
      601 cggcgacgtg caggcggcga aggcgccgcc gtcgagctgg cactggaagg cggcgttgga
      661 ctggtcggag gagaacgtga gtctggcgga ggggctggcc gacgggtcgg ccggtccgct
      721 gctcaggaag gtgttgggga ccgggggcgg cgggatggag gtgaagtgcc acacgcggtt
      781 ggccgtcatg cggttcccga ggacatcggc caacccggtc ggaccgccca cgaccgtcac
      841 cgtgtacgtg gcgttgaagg ccagcggggc cgacggcgtc agcgtggccg tctgggtcgc
      901 agcgctgtag gccaccgtgg ccgcaacggc gatgccgccc ggtgccgtca gcgtgaagtt
      961 ggccttcgac acggtggtcg gatcgaccgg ctcggagaac gtggccgaga cggtggcgtt
     1021 ccgggccacg ctggtggcgt tgtcggacgg gctgagcccg gtgaccgtcg ggccggtggt
     1081 gtcgaccgtc caggtccggg aggcggcggt ggggtcggtg ccgccggccg tggtggcccg
     1141 cacctcgaag gtgtgcgccc cgtcggccag cccggtgccg ctgaacggcg acgtgcaggg
     1201 cgtgaacgag aaggccgcac cgtcgaggcg gcaggcgaag gtggcgcccg gctggtcgga
     1261 ggagaaggtg aaagaagccg acgtcgtccg ggtcgctccg gtcggaccgg aggtggcggt
     1321 gatcgtcgtg tccggtgtcg gcaccggcgg gccgccgttg aagtacgggt cggcgcccat
     1381 gagggcgaag gcgttgagcg aggcgtccga cgagtccatc gtccagtcgt ggtagacgcc
     1441 gttgtcgtcg ttgccgtagg agttgaagta cacgacggcg tcgatggcgg tgtcgtcggt
     1501 cttgagcgtg gtgcgggcgg cgtcgaccca gttggccttg cggtcgacgg cgccggcgtc
     1561 catgacgccg tactcgccga ccatgatcgg cttgccggtg gtgacggccc aggcgtagaa
     1621 gctcttgaag acgttcttga acgacgtgtc gctctgaccc ggcttcatgt accagtcgta
     1681 gccgtcggag cagacccagt cgacgtagcc gtcgccgggg tagtactgct gggccgagcg
     1741 gtcggagaac ccgctggcgt tggggcacca cacccaggac acgttggtgg cgccctcctg
     1801 gcggaagagc gtgacgatgt gctggaaggc ggcgatgtac aacgccggcg attcggagta
     1861 ctgcaggttc cggttgccgt ccatctccca gaaccaccgg atgaagagcg gctgggcgag
     1921 ggcggcgatg gcgtcggccc gctggcggat gaaggcgtcc tgggcgccgg agacgatctg
     1981 gtcggcgtag gtcttggccc acgagatcat cgggatgcgg ccgttgtcga agtcccactg
     2041 ctcccgggtg gtggggaagg ggtccgtcca cgggtggtag tagtggtcga tggcgagctt
     2101 gcggccgagc ttggcctcga gcgcctccac cccggtcttc tgggccgacg cgctggagcc
     2161 cgtcttgacg tgggcgccga acagcacgcc ctgagccggg gcggccggcc cggaaggtgc
     2221 ggccccgggg accgccgtcg ggctgccccc cacgccccag gtggtggtcg tcgtgctggc
     2281 ctcggtggtg gtcgtcgtgt ccgtcgggtc ggtggtgggc gcggcggcgg tcgtggcggt
     2341 ggtgtcgctg accggcgaca ggccggcggc cgcggtgtcc gtcgtcgacg acgaggcggc
     2401 gacgtcggct ccggcgggag ccggcggcga ggcgacgacg accgtcaccg cgccggcgat
     2461 cgacagtccg gccaagagcg cggcggcgac ggcgcgccgc ggggacagcc tgcgggcagc
     2521 gggtcgcgtt ggcaccatcg gggacctccg gggaaacggg gggcaacggc cggcccaacg
     2581 gcccgctgcc actctccgtg acatattcgc cctgattcgg gaggtccctg cccgtcggag
     2641 cggattggtt ccgctgccgc cgcctcttcc ctatcgggtc ccttcgtccg gcgggcccag
     2701 accggccagc accgcccggg cggtggcctg ggcgtcggcg atgcagtcgg gaatgccgac
     2761 gccgccgtag gcggcgcccg tcaccgccac gccgggacag gcggccagcg cctggcggat
     2821 gcgctccacc cggccgagat ggccgacggt gtactgcggc atcccggccg ggtagcggtg
     2881 gacctcgcgg tggacgggcg tgccccggat cccggccagg gcggccagct cggcccggac
     2941 caggtggacg agcccgtcgt cgtcggcctc caggaccgcc tcccggccga cgccgccgac
     3001 gtaaccccgg acgagaacct gcccgggggg cgcccggccc ggccacttgg ccgaccccca
     3061 cgtggcggcc aggaggtggc gaccctcggc ccgggggacg acgaacccgt agccggcggg
     3121 cgccgtgccg acgtcgtc
//
LOCUS       DATGJT010000440         5639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1303730, whole genome shotgun sequence.
ACCESSION   DATGJT010000440 DATGJT010000000
VERSION     DATGJT010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5639
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303730"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VKX24_07510"
     CDS             <1..540
                     /locus_tag="VKX24_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019180511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08369.1"
                     /translation="AIVLDIMLPGMNGYKVCSALREAGHWTPILMLTAKDGELDEAEA
                     LDTGADDFLTKPFSFVVLTARLRALLRRGAPARPAVLTAGDLRLDPASHLAWRADDEL
                     NLTAREFALLEFLMRRVGQVTSKTEILEHVWDPAYDGDSNIVEVYVGYLRRKVDVPYG
                     RRAIQTVRGVGYRLAPDGG"
     gene            530..2023
                     /locus_tag="VKX24_07515"
     CDS             530..2023
                     /locus_tag="VKX24_07515"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08370.1"
                     /translation="MAVNPFAFTRNRPALRSRLRPRRRLRPLRRWFLASVRARTTALS
                     MLVVAAALSAGAISLVVIVSRSLVRNVDETNLTRAEDVAARARTGALGRIIPVSGGAG
                     DRSVFIQVVDQSGSVVASSENFLDPNAFIYLYPDQSGDHPILWRLTVHGPPIAPHADF
                     RIVVLTGQTPNGPANVIVATEMAQAEETVHELRRALEYGAPGVLLLAGLLIWLLVGRA
                     LRPVELIRSQVAAITDTHSLDRRVAEPPVDDEVGRLAQTMNAMLDRLQRSAERQRRFV
                     ADASHELRSPLASSRAQLEVALSHPDPSTWEDTARDLLSENLRMERLVNDLLFLARNE
                     DAPAGPARTAVLDLDDVVLAEAGRLRTRGRVQVDISKVSAGRVRGVGDHLTRVVRNLL
                     ENAERHAASTVRLELGAVLPHGRGPQVQLVVSDDGPGVPPEHREHIFDRFIRLDDARS
                     RPDGDCAAGTGLGLAICREIVTAHGGRIWADQARGGGARFVVQLPAD"
     gene            complement(2079..3005)
                     /locus_tag="VKX24_07520"
     CDS             complement(2079..3005)
                     /locus_tag="VKX24_07520"
                     /EC_number="1.14.19.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019871644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045300 - acyl-[acyl-carrier-protein]
                     desaturase activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP desaturase"
                     /protein_id="HLJ08371.1"
                     /translation="MTTTSRSPEDLRLIHDLMPAAEKLVERHIASAKEWFPHLYVPWG
                     RARDFEPDEVWDPQEFPVPDAVRDALFVNLLTEDNLPYYFHTIDNMFGPGVWGEWIRR
                     WTAEEQRHSIVIRDYLTVTRALDPVELERGRMAQVSGGVVPEPTTPADTLVYVALQEL
                     ATRVSHRNTGKLLGDPVGYEVMARVAADENLHYLFYRELVTEALAIDPSAVVLAVDRQ
                     VREFEMPGTGIVNFTARAAAIARAGIYDLALHYDQVLVPVVLRHWRLEEVEGLSTEAE
                     EARARVLRYMRRLESVARRLTERRQARELVDA"
     gene            3246..4544
                     /locus_tag="VKX24_07525"
     CDS             3246..4544
                     /locus_tag="VKX24_07525"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLJ08372.1"
                     /translation="MSNDAGFGTIGVSPDLCDALAAQGISEPFPIQILTMPAALAGRD
                     ICGKAKTGSGKTLAFGIAAIERTKPAAPRHPRALVLVPTRELAMQVAGVLAPLATVRD
                     LTVVTVYGGDSTRKQAAALGRKGDIVVATPGRLIDFLERGEIYLDEIDMVVLDEADRM
                     ADMGFTPQVTWILRHLGDVHPQTMLFSATLDGDVDHLVKKYLVDPVHHEVESDQPTVD
                     LMEHRFLKVHQMDKVNVAASIINGAERCLVFVRTKRGADRVASDLRRAGVKVGVIHGD
                     LPQKTRSRAMADFGSGAIRALVATDVAARGLDVKGVDVVLHYDPAEDHKAYLHRSGRT
                     ARAGKTGVAVSLVLWDQEREAEALQRRLGIAQPVIEVFSNDVRLEDLAGWDPAADAVD
                     TVPEAEAATGTDGAGPAAPPPPSASLRPKPGPARRRRRML"
     gene            4590..>5639
                     /locus_tag="VKX24_07530"
     CDS             4590..>5639
                     /locus_tag="VKX24_07530"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HLJ08373.1"
                     /translation="MERSVRVLHIEDSPTDTELVRAVLGRSPVADFGVESVPTLADGL
                     ARLAANGGADGGFDVIVLDLHLPDAEGLETFTRVAAAAGGTPIVVCTGSVSEHLGIAA
                     VEHGAQDFVVKWSTDPEALGRTLVYAVQRSRQLATLQAHLAESAGAGDRLAAANSAIR
                     EFLAMVVHEIRTPITIISGYANLLRDAPGTFTPAEQAESLSTILAQTERLRRLTDTLL
                     THEGLEAGAVTAHPTEVCVVEAVDGALAAAGPAGAEFKVCCDPGLTAHVDPAHLQQAL
                     VNYATNALKYGAPPFAVTAARDNGDGPAAVVIRVTDDGDGVPADFVPRLFGRFARLGG
                     GPAGAGVPGTGLGLSI"
BASE COUNT          764 a         2146 c         1966 g          763 t
ORIGIN      
        1 gccatcgtcc tcgacatcat gttgcccggc atgaacggct acaaggtgtg ctcggcgctg
       61 cgggaggccg gccactggac gccgatcctc atgctgacgg ccaaggacgg cgagctcgac
      121 gaggcggagg cgctcgacac cggcgccgac gacttcctca cgaagccgtt ctccttcgtc
      181 gtgctcaccg cccggctgcg ggcgctgctg cggcgggggg cgccggcccg gccggcggtg
      241 ctgaccgccg gcgacctccg gctcgatccc gcctcgcacc tggcctggcg ggccgacgac
      301 gagctcaacc tgaccgcccg ggagttcgcg ctgctggagt tcctgatgcg ccgggtcggg
      361 caggtcacgt cgaagacgga gatcctcgag cacgtctggg atcccgccta cgacggcgac
      421 tccaacatcg tcgaggtcta cgtcgggtat ctgcggcgca aggtcgacgt gccctacggg
      481 cggcgggcga tccagacggt gcggggcgtc gggtaccgcc tcgctcccga tggcggttaa
      541 ccccttcgcc ttcacgcgca accggccggc cctccggtcg aggctccggc cccggcgccg
      601 gctacggccc ctgcggcgct ggttcctggc ctcggtccgg gcccggacga ccgcgctctc
      661 gatgctggtg gtggcggcgg cgctgtcggc cggcgccatc agcctggtgg tgatcgtctc
      721 ccggtcgctc gtccgcaacg tcgacgagac caacctcacc cgggccgagg acgtcgccgc
      781 ccgggcccgg accggcgccc tcggccggat catcccggtc tccggcggcg ccggcgaccg
      841 gtcggtgttc atccaggtgg tcgaccagtc gggcagcgtg gtggcctcga gcgagaactt
      901 cctggacccc aacgccttca tctacctcta tcccgaccag agcggcgacc acccgatcct
      961 gtggcggctc accgtccacg gcccgccgat cgccccccac gccgacttcc ggatcgtcgt
     1021 cctcaccggc cagaccccga acgggccggc gaacgtgatc gtggccaccg agatggcgca
     1081 ggccgaggag acggtccacg agctgcgccg ggcgctggag tacggcgccc ccggcgtcct
     1141 cctcctggcc ggcctgctca tctggctgct cgtcggacgg gccctgcggc cggtggagct
     1201 catccgctcg caggtggcgg ccatcaccga cacgcactcc ctcgaccgcc gggtcgccga
     1261 gccgccggtc gacgacgagg tcggccgcct ggcccagacg atgaacgcca tgctcgaccg
     1321 gctgcagcgt tcggcggagc ggcaacggcg cttcgtcgcc gacgcctccc acgagctgcg
     1381 cagcccgctg gcctcgagcc gggcccagct ggaggtggcg ctgtcccatc ccgacccgtc
     1441 cacctgggag gacacggctc gcgacctgct gtcggagaac ttgcggatgg agcgcctcgt
     1501 caacgacctg ctgttcctgg cccgcaacga ggacgccccc gccgggccgg cgcggaccgc
     1561 cgtcctcgac ctggacgacg tcgtcctcgc cgaggccggc cggctgcgga cccggggccg
     1621 ggttcaggtc gacatctcga aggtgtcggc cggtcgggtc cgcggcgtcg gcgaccacct
     1681 gacccgggtg gtgcgcaacc tgctggagaa cgccgaacgc cacgccgcct cgaccgtgcg
     1741 cctcgagctc ggagcggtcc tgccccacgg ccgggggccc caggtgcagc tggtggtgtc
     1801 ggatgacggc cccggcgtcc cgccggagca ccgggagcac atcttcgacc ggttcatccg
     1861 cctcgacgac gcccgcagcc ggcccgacgg cgactgcgcc gccggcaccg ggctcggcct
     1921 ggccatctgc cgggagatcg tcaccgccca cggcgggcgg atctgggccg accaggcccg
     1981 cggcggcggc gccaggttcg tcgtgcagct gcccgcggac tgaaaccggc gttcctcttc
     2041 cgctgtattc cggtaaagga acgccggttg ggagagggtc aggcgtcgac gagttctcgg
     2101 gcctggcggc gctcggtgag gcggcgggcc accgactcca gccggcgcat gtagcgcagg
     2161 acccgggccc tcgcctcctc ggcctcggtc gagagcccct cgacctcctc cagccgccag
     2221 tggcgcagga ccaccgggac cagcacctgg tcgtagtgga gggccaggtc gtagatgccg
     2281 gcccgggcga tcgccgccgc ccgggcggtg aagttcacga tgccagtccc cggcatctcg
     2341 aactcccgga cctggcggtc gacggccagc accaccgccg acggatcgat ggccagggcc
     2401 tcggtaacga gctcgcggta gaagaggtag tggaggttct cgtcggccgc cacccgggcc
     2461 atgacctcgt agccgacggg gtcgccgagc agcttgccgg tgttgcggtg cgagacccgg
     2521 gtggccagct cctggagggc cacgtagacc agcgtgtcgg ccggagtggt cggttcgggc
     2581 accacgcccc ccgacacctg ggccatccgg ccccgctcga gctccaccgg gtcgagcgcc
     2641 cgggtcaccg tcaggtagtc gcggatgacg atggagtgcc gctgctcctc agccgtccac
     2701 cgccggatcc actcccccca caccccggga ccgaacatgt tgtcgatggt gtggaagtag
     2761 tagggaaggt tgtcctcggt caggaggttg acgaacaggg cgtcccggac ggcgtcgggg
     2821 accgggaact cctggggatc ccagacttcg tcgggctcga agtcccgggc ccggccccag
     2881 gggacgtaga ggtggggaaa ccattccttg gccgaggcga tgtggcgctc cacgagcttc
     2941 tcggcggcgg gcatgaggtc gtggatcagt cggaggtcct ccggcgaccg ggaagtcgtc
     3001 gtcatgggcc ccagcctacc tacatgtcgg taggcaagcg agccgttggc gccccgcacc
     3061 gggttcgccc cggccggcgg ctagaatagg tgttcgagcc gagcgtcaac tccgccaccg
     3121 accgctgcgg ggggcgccgg ccgaccttac gtcgtcgggg gaacgtcccc cgagcccccg
     3181 ggcgcagttc gggggatctg tccggagacg gtcgttccgg accccgaacg caccaggaga
     3241 tgacgatgtc aaacgacgcc gggttcggca ccatcggggt gtcgcccgac ctctgcgacg
     3301 ctctggcggc ccagggcatc agcgagccct ttcccatcca gatcctgacc atgccggccg
     3361 ccctcgccgg gcgggacatc tgcggcaagg ccaagaccgg ctccggcaag acgctggcct
     3421 tcgggatcgc cgccatcgag cggacgaagc cggccgcgcc ccgccacccc cgggcgctgg
     3481 tcctcgtgcc gacccgggag ctggccatgc aggtggcggg cgtgctggcg ccgctggcga
     3541 cggtgcggga cctgaccgtc gtcacggtct acggcggcga ctccacccgc aagcaggccg
     3601 ccgccctcgg ccgcaagggt gacatcgtgg tggccacccc cggccggctc atcgacttcc
     3661 tcgaacgggg cgagatctac ctcgacgaga tcgacatggt cgtcctcgac gaggccgacc
     3721 gcatggccga catgggcttc acgccccagg tgacgtggat cctccgccac ctcggcgacg
     3781 tccatcccca gacgatgctg ttctctgcga cgctcgacgg cgacgtcgac cacctcgtga
     3841 agaagtacct cgtcgacccc gtccaccacg aggtggaatc cgaccagccg acggtcgacc
     3901 tgatggagca ccgcttcctc aaggtccacc agatggacaa ggtcaacgtc gccgcctcca
     3961 tcatcaacgg cgccgagcgc tgcctcgtgt tcgtccgcac caagcggggc gccgaccggg
     4021 tcgcctccga cctccgccgg gccggcgtga aggtcggtgt catccacggc gacctgcccc
     4081 agaagacccg ctcccgggcc atggcggact tcggctcggg cgccatccgg gcgctggtgg
     4141 ccaccgacgt cgccgcccgg ggcctcgacg tcaagggcgt cgacgtcgtc ctccactacg
     4201 accccgccga ggatcacaag gcctacctcc accgctccgg gcgcaccgcc cgggcgggga
     4261 agaccggcgt ggccgtcagc ctggtgctgt gggaccagga gcgggaggcc gaggcgctcc
     4321 agcggcggct cgggatcgcc cagccggtga tcgaggtgtt ctccaacgac gtgcggctcg
     4381 aagacctggc cggctgggac ccggcggccg atgccgtcga caccgtcccc gaggccgagg
     4441 cggccaccgg caccgacggc gccggcccgg ccgccccgcc gccgccgagc gcctcgctgc
     4501 ggcccaagcc gggcccggcg cgccggcgcc gccgcatgct ctgagccgct ctggcgaaag
     4561 ggcgccgtcc ccgccgtaca ctcgctcggg tggaacgcag cgtccgagta ctccacatcg
     4621 aggacagccc gaccgacacc gagcttgtcc gggccgtgct cggccgctcc ccggtggcgg
     4681 acttcggcgt cgagtcggtc cccacgctgg ccgacgggct ggcgcgcctg gcagcaaacg
     4741 gcggggcgga cggcggcttc gacgtcatcg tcctcgacct gcacctcccc gacgccgagg
     4801 gcctcgagac cttcacccgg gtcgcggcgg ccgccggcgg gactccgatc gtcgtgtgca
     4861 ccggcagcgt ctccgaacac ctcggcatcg ccgccgtcga gcacggcgcc caggacttcg
     4921 tcgtcaagtg gagcaccgac cccgaggcgc tcgggcggac gctcgtctac gccgtccagc
     4981 ggtcccgcca gctcgccacc ctccaggccc acctggcgga gtcggccggc gccggtgacc
     5041 ggctggccgc cgccaacagt gccatccggg agttcctggc catggtcgtg cacgagatcc
     5101 ggacgccgat cacgatcatc tccggctacg ccaacctgct gcgcgacgcg ccgggcacct
     5161 tcacgccggc cgagcaggcc gagagcctgt cgacgatcct ggcccagacg gagcggctcc
     5221 gccggctgac cgacaccctc ctcacccacg agggcctcga ggccggcgcg gtcaccgccc
     5281 accccaccga ggtgtgcgtg gtggaggccg tcgacggagc gctggccgcc gccggcccgg
     5341 ccggcgcgga gttcaaggtg tgctgcgatc cggggctcac ggcccacgtc gatcccgccc
     5401 acctccagca ggccctggtg aactacgcca ccaacgccct gaagtacggc gccccgccct
     5461 tcgccgtcac cgccgcccgc gacaacggcg acggcccggc ggcggtcgtg atccgggtga
     5521 ccgacgatgg cgacggcgtg cccgccgact tcgtcccccg gctcttcggt cggttcgccc
     5581 gcctcggcgg agggccggcc ggcgccggcg tcccgggcac gggcctcggt ctgtcgatc
//
LOCUS       DATGJT010000441         2667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_471449, whole genome shotgun sequence.
ACCESSION   DATGJT010000441 DATGJT010000000
VERSION     DATGJT010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471449"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..322)
                     /gene="nuoK"
                     /locus_tag="VKX24_07535"
     CDS             complement(17..322)
                     /gene="nuoK"
                     /locus_tag="VKX24_07535"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014742897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HLJ08374.1"
                     /translation="MNVPGAWYLTVAAVIFCIGAVGLLVRRNALVMFMCVELMLNAVN
                     LTFVTFARMLDDIGGQVFVFFTLVVAAAEVVIGLALIVSIFRRRQGATADDISLLRG"
     gene            complement(319..939)
                     /locus_tag="VKX24_07540"
     CDS             complement(319..939)
                     /locus_tag="VKX24_07540"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HLJ08375.1"
                     /translation="MEWAVFVVFAVAAIGGAGGVVLSRKPVHAALSLVLTLFSVAVFF
                     VLEGAHFLAAVQVIVYAGAIVILFLFVIMLLGIDQEDVLNEPLRGQRPVAVVAGVALF
                     AGLLLVAKILQPTGAPAQRGSLTQGDVPNVERLARSLFTDFLWPFEITSALLLIAVVG
                     AIVLARRSGPGSTLDEEHQMDIEPGDPRHVGGGSDAGPEAALEPER"
     gene            complement(939..1625)
                     /gene="nuoI"
                     /locus_tag="VKX24_07545"
     CDS             complement(939..1625)
                     /gene="nuoI"
                     /locus_tag="VKX24_07545"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HLJ08376.1"
                     /translation="MSRWGGFAVTLRQALFGPRVTTEYPEAKRPKPTRFHGRHILNRY
                     EDGMEKCIGCELCAGVCPAQCIYVRGADNPPDAPVSPGERYGFVYEINYLRCIHCDLC
                     VEACPTEAITETKLFEFSFTKRRDAIYTKAELLVDDDGRARRMPWEHWVGDEDERASA
                     WVRATASSGEDAYEGRVAWSPELGFGLRPPEGAPSGSGDEARQYPAGPSNPAPMERVD
                     RRDKAKRGER"
     gene            complement(1618..>2667)
                     /locus_tag="VKX24_07550"
     CDS             complement(1618..>2667)
                     /locus_tag="VKX24_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HLJ08377.1"
                     /translation="RIGPNRAGPFGILQSLADGIKLFFKEQSIPDSADRPVFRLAPYM
                     SVLPAFLAFSVVPLSGTFSVAGHQTILQLADPPIGVLFVLAMSGLGVYGVLLAGWSSG
                     SKYPLLGSVRASAQMVSYEAVLGLGIIGAVLQAGTLSTRQIVTLQGYPGSNPLDWFFL
                     PAFVSFGLFCVAAVAETNRAPFDLVEAEQELVGGFHTEYTGIRFAIFFLAEYMNMATQ
                     SAIAVTLFLGGPAGPLPPGVPKVIGGLFWFLFKVTLFLLGYIWLRASLPRLRYDQLMD
                     LAWKVGIPLGLLWLAVSATYRIAQDKNWPVWIYLAAPVGAFAVYGVLWLSMPNRPGAG
                     GPGLEVFPEREVRSE"
BASE COUNT          459 a          918 c          965 g          325 t
ORIGIN      
        1 tggcttcagt gccctcctag ccccgcagca ggctgatgtc gtcggcagtg gcgccctggc
       61 ggcggcggaa gatcgagacg atcagagcca ggccgatcac gacctcggcc gccgccacca
      121 ccagggtgaa gaacacgaac acctgcccgc cgatgtcgtc gagcatccgg gcgaaggtga
      181 cgaaggtcag gttgacggcg ttgagcatca gctccacgca catgaacatg accagggcgt
      241 tgcgccggac gaggaggccg accgcgccga tgcagaagat gacggcggcc acggtcaggt
      301 accaggcccc gggaacgttc atcgctcggg ctccagcgcc gcttccgggc ccgcatcact
      361 gccgccgccg acatgacggg ggtcgccggg ctcgatgtcc atctggtgct cctcgtcgag
      421 tgtcgaaccg ggcccgctcc gccgggcgag gacgatggcc ccgacgacgg cgatcagcag
      481 caacgccgac gtgatctcga acggccacag gaaatcggtg aacaggctcc gggccaggcg
      541 ttcgacgttc ggcacgtcgc cctgggtgag ggacccccgc tgcgccggcg ccccggtcgg
      601 ctgcaggatc ttggccacca gcagcagccc ggcgaacagc gccacgccgg cgacgacggc
      661 gaccggccgc tgcccccgca gcggttcgtt gagcacgtcc tcctggtcga tgccgagcag
      721 catgatcacg aacaggaaca ggatgacgat ggccccggcg tagacgatga cctggacggc
      781 ggccaggaag tgcgctccct ccagcacgaa gaacaccgcc acggagaaca gcgtcagcac
      841 cagtgacagg gcggcgtgga ccggtttgcg ggacagcacg acgccgccgg cgccgccgat
      901 ggcggccacg gcgaagacga cgaagaccgc ccactccatc agcgctcccc ccgcttggcc
      961 ttgtcccggc ggtcgacccg ctccatggga gcggggttcg atggcccggc gggatactgg
     1021 cgcgcctcgt cgccgctccc ggagggggcg ccctcgggcg gccgcagccc gaagccgagc
     1081 tccggcgacc aggcgacccg cccctcgtag gcgtcctcgc cgctggaggc ggtggcccgc
     1141 acccaggcgc tggcccgctc gtcctcgtcg ccgacccagt gctcccacgg catccgccgg
     1201 gcccggccgt cgtcgtcgac cagcagctcg gccttggtgt agatggcgtc ccggcgcttg
     1261 gtgaaggaga actcgaacag cttggtctcg gtgatggcct cggtcgggca ggcctcgacg
     1321 cagagatcgc agtggatgca gcgcaggtag ttgatctcgt agacgaagcc gtagcgctcc
     1381 cccggcgaca cgggggcgtc gggcgggttg tcggcgccgc ggacgtagat gcactgggcg
     1441 gggcagacac cggcgcacag ttcgcagccg atgcacttct ccatcccgtc ctcgtagcgg
     1501 ttgaggatgt gccggccgtg gaagcgggtc ggcttcggcc gcttggcctc ggggtactcg
     1561 gtggtgaccc ggggcccgaa gagcgcctgc cggagggtga cggcgaagcc gccccaccta
     1621 ctcactgcgc acctcccgtt cggggaagac ctcgaggccc ggcccgccgg ccccggggcg
     1681 gttcggcatc gagagccaca gcacgccgta gacggcgaag gcgccgacgg gggcggcgag
     1741 gtagatccac accggccagt tcttgtcctg ggcgatccgg tacgtcgccg agaccgccag
     1801 ccacaggagg ccgaggggga tcccgacctt ccaggccagg tccatcagct ggtcgtagcg
     1861 gagccggggc agcgacgccc ggagccagat gtagcccagc aggaacagcg tgaccttgaa
     1921 caggaaccag aacagcccgc cgatcacctt ggggacgccg ggcgggaggg gcccggccgg
     1981 cccgccgagg aacagcgtga cggcgatggc cgactgggtg gccatgttca tgtactcggc
     2041 gaggaagaag atggcgaagc ggatgccggt gtactcggtg tggaagccgc cgacgagctc
     2101 ctgctccgcc tcgacgaggt cgaacggcgc ccggttggtc tcggccacgg ccgccacgca
     2161 gaacagcccg aaggacacga aggccggaag gaagaaccag tcgagcgggt tcgagccggg
     2221 gtagccctgc agcgtcacga tctgacgcgt cgacagcgtc ccggcctgga ggacggcgcc
     2281 gatgatgccg agcccgagca ccgcctcgta gctgaccatc tgggccgagg cccgcaccga
     2341 gccgagcagc gggtacttcg accccgagga ccagccggcc agcagcacgc cgtagacgcc
     2401 gaggcccgac atggccagca cgaacagcac gccgatgggc gggtcggcca gctgcaggat
     2461 cgtctggtgc ccggcgacgg agaacgtccc cgacagcggc acgaccgaga aggccaggaa
     2521 ggccggcagc accgacatgt agggcgccag gcggaagacc ggccggtcgg cggagtcggg
     2581 gatcgactgc tccttgaaga acagcttgat gccgtcggcc agcgactgga ggatgccgaa
     2641 cggcccggcc cggttggggc cgatccg
//
LOCUS       DATGJT010000442         2879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_471468, whole genome shotgun sequence.
ACCESSION   DATGJT010000442 DATGJT010000000
VERSION     DATGJT010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471468"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VKX24_07555"
     CDS             complement(<1..281)
                     /locus_tag="VKX24_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ08378.1"
                     /translation="MAAGFVHHQVAVNGVELHVAELGEGPLVLLCHGWPELWWSWRHQ
                     LPALAAAGYRAVAMDQRGYGRSSQPERVEDYDIVHLGDDVLGLVDALGE"
     gene            398..823
                     /locus_tag="VKX24_07560"
     CDS             398..823
                     /locus_tag="VKX24_07560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08379.1"
                     /translation="MPSVAMLYAVLVAALGILAVAHRRRSRVLPRLRGPLSIHRCRAR
                     PLFSEVGQLSFQLDALVEDCDDPSVPRGTPFALRLERPTRRSDYLFSRVRASVERGHA
                     LVVDVEDHLTARKARLCANGWTVVLDVVQSAGWPAPVRG"
     gene            complement(813..>2879)
                     /locus_tag="VKX24_07565"
     CDS             complement(813..>2879)
                     /locus_tag="VKX24_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HLJ08380.1"
                     /translation="EGQARTADWKFRVAKRLHDLAIERYGLEPGDLIFDALTFPLGTG
                     QEDLRRDAIETMEAIRRIKAELPGVSTVLGVSNVSFGLKPAIRHVLNSVFLHECVQAG
                     LDAAIVHAARILPMHKIDERAKKLALDLIYDRGGDGYDPLTELMAAFEDVEAGIIERE
                     DRSGWPVEERLKARIVDGDRDGLEDELDEALTGGRKALSIINDVLLDGMKVVGELFGS
                     GQMQLPFVLQSAETMKTAVAFLEPHMEKADAGGKGRVVLGTVKGDVHDIGKNLVDIIL
                     TNNGYEVKNLGIKVPVHDFIEAVEEFKADAVGMSGLLVKSTLIMRENLEELNSRGLDH
                     IPVLLGGAALTRSYVERDLREVYKGRVFYGKDAFEGLRTMETLIEGKRTGHLDPDFGR
                     APGGRILPPRKSQRSAPEVDPSAIPARSAVATDNPVFEPPFLGSRVAKGIPLDDIAAY
                     LNETALFRNQWQFRPERGESDEEFKARIRPVLRAELAKAKEGATLVPAVAWGYFPVNG
                     DGNDLIVWSDDTRREERLRFSFPRQRKEPWYSIADFFRPVSSGEADYAAFHVVTMSDV
                     ASRHSAELFAANRYQDYLYFHGLSVEMAEALAEYWHHRIREEWGFADEDGPTLGGLFK
                     QQYRGSRYSWGYPACPDLDDQAKVAELLEIERIGVTVSEEFQLHPEQSTSAIIVPHPE
                     AKYFIL"
BASE COUNT          398 a         1031 c          983 g          467 t
ORIGIN      
        1 tcctcgccga gagcgtcgac gaggccgagg acgtcgtcgc cgagatggac gatgtcgtag
       61 tcctccaccc gctccggctg cgagctgcgg ccgtagccgc gctgatccat cgccaccgcc
      121 cggtacccgg ccgcggccag cgccggtagc tggtgccgcc acgaccacca cagctcgggc
      181 cagccgtggc acagcagcac cagcggcccc tcgccgagct cggcgacgtg gagttcgacg
      241 ccgttgaccg ccacttggtg gtgcacgaag cccgcggcca cgagggccca ccctatcgtc
      301 ggccttcggt ttcgggcccg gttcggcggg gcaggtagtt tgatgacgca tcccggacgc
      361 cggcgtgcac ccggccctgc accaccaagg actgaagatg ccgagcgtcg ccatgctcta
      421 cgccgtcctc gtcgccgccc tggggatcct ggcggtcgcc catcgccggc ggagtcgggt
      481 gctcccgcgt ctgcgggggc cgctgtcgat ccaccgctgc cgggcccgcc cgctgttctc
      541 cgaggtgggc cagttgtcgt tccagctcga cgccctggtc gaggactgcg acgacccgtc
      601 ggtcccccgg gggacaccgt tcgccctgcg gctcgaacgg cccacccggc gcagcgacta
      661 cctgttctcc cgggtgcggg cctcggtcga gcggggccac gccctcgtcg tcgacgtcga
      721 ggaccacctc accgcccgca aggcccgcct ctgcgccaac ggctggacgg tcgtgctcga
      781 cgtcgtccag tcggccggct ggcccgctcc ggtcagagga tgaagtactt ggcttcgggg
      841 tgggggacga tgatcgccga cgtcgactgc tcggggtgga gctggaactc ctccgacacc
      901 gtgacgccga tccgttcgat ctccagcagc tcggccacct tggcctggtc gtcgaggtcg
      961 gggcaggccg ggtagcccca ggagtagcgc gacccccggt actgctgctt gaacagcccg
     1021 ccgagcgtgg gcccgtcctc gtcggcgaag ccccactcct cccggatgcg gtggtgccag
     1081 tactcggcca gcgcctcggc catctccacc gagaggccgt ggaagtacag gtagtcctgg
     1141 taccggttgg cggcgaacag ctcggcggag tggcgggacg ccacgtcgct catcgtcacc
     1201 acgtggaagg cggcgtagtc ggcctcgccc gatgacaccg gacggaagaa gtcggcgatc
     1261 gagtaccacg gctccttgcg ctggcggggg aacgagaacc gcagccgctc ctcgcggcgg
     1321 gtgtcgtcgc tccacacgat gaggtcgttg ccgtcgccat tgaccgggaa gtagccccag
     1381 gccaccgccg gcaccagcgt ggcgccctcc ttggccttgg ccagctcggc ccgcagcacc
     1441 gggcggatgc gggccttgaa ctcctcgtcg gactcgccgc gctcggggcg gaactgccac
     1501 tggttgcgga agagcgccgt ctcgttgaga taggcggcga tgtcgtcgag cgggatgccc
     1561 ttggccaccc gggagccgag gaacggcggt tcgaacaccg ggttgtccgt cgccaccgcc
     1621 gagcgggccg ggatcgccga agggtcgacc tccggagcgg agcgctgcga cttgcggggc
     1681 ggcaggatcc gccctcccgg cgcccgtccg aagtccgggt ccaggtgacc cgtccgcttg
     1741 ccttcgatca gggtctccat cgtgcggagg ccctcgaagg cgtccttccc gtagaagacg
     1801 cggcccttgt agacctcccg gaggtcgcgt tcgacgtagc tgcgggtgag tgcggcgccg
     1861 cccaggagga cggggatgtg atcgaggccc cgggagttca gctcctccag gttctcccgc
     1921 atgatcagcg tgctcttcac cagcagcccg ctcatgccga cggcgtcggc cttgaactcc
     1981 tcgaccgcct cgatgaaatc gtggaccggc accttgatgc cgaggttctt cacctcgtag
     2041 ccgttgttgg tcaggatgat gtcgaccagg ttcttgccga tgtcgtggac gtcgcccttc
     2101 accgttccca gcacgacccg gcccttcccg ccggcgtcgg ccttctccat gtggggctcg
     2161 aggaaggcga cggcggtctt catcgtctcg gccgactgca gcacgaacgg cagctgcatc
     2221 tggcccgagc cgaacagctc gccgaccacc ttcatcccat ccagcaacac gtcgttgatg
     2281 atcgacagcg ccttgcggcc cccggtgagc gcctcgtcga gctcgtcctc gaggccgtcg
     2341 cggtcgccgt cgacgatccg ggccttgagg cgctcctcca cgggccagcc ggagcggtcc
     2401 tcccgctcga tgatgccggc ctccacgtcc tcgaaggccg ccatcagctc cgtgagcggg
     2461 tcgtagccgt cgccgccccg gtcgtagatg aggtcgaggg cgagcttttt ggcccgctcg
     2521 tcgatcttgt gcatcggcag gatgcgcgcc gcgtggacga tggcggcgtc gaggccggcc
     2581 tggacgcact cgtggaggaa caccgagttg agtacgtggc ggatggccgg cttcaagccg
     2641 aagctcacat tggacacgcc gagcaccgtc gagacgccgg gcaactccgc cttgatgcgg
     2701 cggatggcct ccatcgtctc gatggcgtcc cggcggagat cctcctggcc ggtccccaag
     2761 gggaacgtca gcgcatcgaa gatcaggtcg ccgggctcga gcccgtagcg ctcgatcgcc
     2821 aggtcgtgga gccgcttggc cacccggaac ttccagtccg ccgtgcgggc ctggccctc
//
LOCUS       DATGJT010000443         2535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_162984, whole genome shotgun sequence.
ACCESSION   DATGJT010000443 DATGJT010000000
VERSION     DATGJT010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162984"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VKX24_07570"
     CDS             <1..934
                     /locus_tag="VKX24_07570"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HLJ08381.1"
                     /translation="GPATVEAALGAKVPIPADNPQTADKVALGRLLFFDPRLSGSNTI
                     ACATCHNPDKGLADGLPRSIGASGEMTRNAMTLWNVAYMRAIHSDGSRTSLEDQAGKA
                     IIGPAMAQTAPALTDALNGVPAYRERFGKVFPDGVTLTNVARAVAAYERTLLTWRSPY
                     DRYQAGDENALSAEAKRGMDLFFSTRTGCSSCHVAPLFTDNQWHVLGVPQAGPKTVDA
                     GRFDVTHNEADRGAFKTLTLRNVALTGPYMHDGVFETLDDVVAFYAGGGGPAPGRDPL
                     IKPIDLTPAEQTALVRFLRSLTDTTTTITPPALP"
     gene            complement(993..2024)
                     /locus_tag="VKX24_07575"
     CDS             complement(993..2024)
                     /locus_tag="VKX24_07575"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HLJ08382.1"
                     /translation="MVRARARRLTAALAMALVAAGSAPARAEDREVRSQWALAQVGAP
                     QAWLRTTGAGIRVGLVDTGVDVAHEDLAGKVVAATSCIGAVGDPARCAGGGADEDGHG
                     THVAGIVAAIRGNGVGIAGIAPDADLVVAKVVTATGAASVPDVVAGIKWVVDHGARVV
                     NLSLDSPAMTFANVKADAVREGLDYAWSRGAIPVLSAGSPRRLGIGLGGRSDRDLNAV
                     VAGATGADGRMVPSSPATGEARLAVLAPGGRGGGHGDPATDVLSTFWEAGRHDAYEAR
                     GGTSAAAAYVSGALALLLAEGYNGLGAVERLLLSADGTVPCGEGSPDCYGRIDVAAAT
                     AGPVRQSSR"
BASE COUNT          364 a          980 c          869 g          322 t
ORIGIN      
        1 cgggccggcc accgtggaag ctgccctcgg tgcaaaggtc ccgatcccgg ccgacaaccc
       61 ccagaccgcc gacaaggtgg ccctgggccg actgctgttc ttcgaccccc gcctgtcggg
      121 cagcaacacg atcgcctgcg cgacctgcca caaccccgac aagggcctgg ccgacggcct
      181 ccctcgcagc atcggcgcct cgggcgagat gacccgcaac gccatgacgc tctggaacgt
      241 ggcctacatg cgcgccatcc actccgacgg cagccgaacc agcctcgagg accaggccgg
      301 gaaggccatc atcggcccgg ccatggccca gaccgccccg gccctcaccg acgcactcaa
      361 cggcgttccc gcctaccggg agcgcttcgg gaaggtcttc cccgacggcg tcaccctcac
      421 caatgtcgcc cgggccgtcg ccgcctacga gcggaccctg ctcacctggc gctcccccta
      481 cgaccgctac caggccggcg acgagaacgc cctgtccgct gaggcgaagc ggggcatgga
      541 cctgttcttc agcacccgga cgggctgctc ctcctgccac gtcgcccccc tgttcaccga
      601 caaccagtgg cacgtcctcg gcgtccccca ggccgggccc aagaccgtcg acgccggccg
      661 gttcgacgtg acccacaacg aggccgaccg cggtgccttc aagaccctga ccctccgcaa
      721 cgtcgccctc accggaccgt acatgcacga cggcgtgttc gagacccttg acgacgtcgt
      781 cgccttctac gccggcggcg ggggcccggc cccgggccgc gaccctctga tcaagccgat
      841 cgacctgacc cccgccgagc agacggccct ggtccggttc ctccggtccc tgaccgacac
      901 gaccaccacc atcacacctc ccgcactgcc ctgaccggac gggaccggcg gcgggggtcg
      961 caccgaccgg cgggggaaca ccgttcggga agttaccgcg aactctgacg gacggggccg
     1021 gcggtggcgg cggcgacgtc gatgcggccg tagcagtcgg ggctgccctc gccgcagggg
     1081 acggtgccgt cggcgctgag caggaggcgc tcgacggcgc cgaggccgtt gtagccctcg
     1141 gccagcagga gggccagggc ccccgacacg taggcggcgg cggccgacgt gccgcctcgg
     1201 gcctcgtagg cgtcgtggcg gcccgcctcc cagaacgtcg acagcacgtc ggtggccggg
     1261 tcgccatggc ccccaccgcg accgcccggc gccagcaccg ccagacgcgc ctcgcccgtc
     1321 gccggcgacg aggggaccat gcgtccgtca gcgcctgtcg caccggccac cacggcgttg
     1381 aggtcgcggt cggaccggcc gcccaggccg atgccgagac ggcgggggct tccggccgac
     1441 aggacgggga tcgccccccg gctccaggcg tagtcgagcc cctcccggac cgcgtcggcc
     1501 ttcacattgg cgaaggtcat ggccggcgag tcgagactga ggttgacgac ccgggcgccg
     1561 tggtccacga cccacttgat gccggccacg acgtcgggca ccgaggccgc tccggtggcc
     1621 gtcaccacct tggccaccac gaggtcggcg tcgggagcga tgccggcgat gccgacgccg
     1681 ttgccccgga tggcggcgac gatgcccgcc acgtgggtcc catggccgtc ctcgtcggcg
     1741 ccgccgccgg cgcagcgggc ggggtcgccg acggcgccga tgcagctggt ggcggccacg
     1801 accttgccgg ccaggtcctc gtgggccacg tcgacccccg tatcgacgag gccgacccgg
     1861 attccggcgc cggtggtgcg gagccacgcc tgcggcgccc cgacctgggc cagcgcccac
     1921 tgcgagcgga cctcccggtc ctcggcccgc gccggtgcgg aaccggccgc cacgagagcc
     1981 atggccagcg ccgccgtcag ccgacgggct cgggctcgga ccatcggaga cctccccccc
     2041 gggaaacccg acgaccacaa cctaccgcag cagtgaggac gatttaacct gatcgttcgc
     2101 caccggcaac acgccggaac cggtccctgt gatccatccc cgcctcgggc cggccagggg
     2161 gagtcccgtt cagagtttgg gcaacgtgcg tgtcggggtg gtaccgggtg acctcgggtt
     2221 ggccgtggtg gtcgacggtg acggggtggg tggggtgctg gccgcgatcg tcgaagcggt
     2281 cgtcaccgcg gttcgacccg cccgagacgt cctccccttg tctgtgttgc aggggtgtga
     2341 acaaaacctc tccgcgggcc gggcccgtga ggacccgttc gacggcccga aacgccagga
     2401 gatcttgctg ttcacaggcc gttcctagcg tcggggctgt ggccgcaccg gatatcccgg
     2461 gtatcaagcg agccgggttg ccggtcgact tcgagcggct cgccgccgaa ggcgacgact
     2521 ggctgacgcc ggagg
//
LOCUS       DATGJT010000444         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1197676, whole genome shotgun sequence.
ACCESSION   DATGJT010000444 DATGJT010000000
VERSION     DATGJT010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197676"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VKX24_07580"
     CDS             complement(<1..468)
                     /locus_tag="VKX24_07580"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ08383.1"
                     /translation="MTFVTSLFTDPQGWYRAHQLLVGQMGVNALLAISIWVTLFAGQL
                     TLANIGFMAIGGYTTVILAAHAHAPLVLSAGAGCALAAGTALMVGLPALRLRGVFLAI
                     ATIGFSEFLRFGLILNLPITGKGQGLANPAADPAAIWPVWASVAVAAWLGWRRS"
     gene            complement(487..1407)
                     /locus_tag="VKX24_07585"
     CDS             complement(487..1407)
                     /locus_tag="VKX24_07585"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ08384.1"
                     /translation="MDVVQQLVNGVFLGSIYAVFAVGYTLVFGVLGVVNLAHSGVFML
                     AAAITYGLVVFHGAPIWLAAPAGLLAAAGLGLVIELGALRPLRRRQAPEIAPLISTIG
                     LSLVFVALVEQSRGGGWLSFVWRDGANSVRFPAGTVPDRVWHVGRLAMPADKVATVVI
                     SVLLMAVLGVVVNRTQVGRAMRAVAENPRAACLLGIDVDRIVLWTVVASSAMAGLAGI
                     LYGVTIGDISPYIGRDQVELRGLAVIVLGGVGSIRGSIVAAYLLGMVEVLALLGFGAN
                     VRAAVAFAALFGMLVVRPGGLFASPAAERA"
     gene            complement(1429..>2324)
                     /locus_tag="VKX24_07590"
     CDS             complement(1429..>2324)
                     /locus_tag="VKX24_07590"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ08385.1"
                     /translation="SQEKVLALLGPTLSNSAVAAHPIAAHARTPMMGVSNSGFNIVGP
                     GCTYCDGWIFRDSVSEAAAIPLTLQHYVDAHHPKGIALLYPNDDKFSVDGATTLKQAA
                     ARLGVHLTGEIAFTKAETDLAPYVTKAVQANPDAIFIASLGGIPAKVMLTARQLGWNG
                     DFLGGQGFNSAAVSKQAGGAGKGAQSASPFFAGNDSPATVAFVKAFRGRYGADPDQLA
                     AQAYTGVRILADALARTARTGDLAATRRRLRDALAATTIDTPLGPFRFTADHDVKQTV
                     YIVAMDGAGGYSLVASVPPAS"
BASE COUNT          392 a          793 c          854 g          285 t
ORIGIN      
        1 cgatctccgc cacccgagcc acgccgccac ggccaccgag gcccacaccg gccagatggc
       61 ggcggggtcg gcggcggggt tggcgaggcc ctggccctta ccggtgatgg gcaggttcag
      121 gatgagcccg aaccggagga attcactgaa cccgatggtg gcgatggcca ggaagacccc
      181 ccggaggcgg agggcgggaa gaccgaccat gagtgcggta ccggcggcca gggcgcaccc
      241 ggccccggcg gagaggacca gcggtgcgtg ggcgtgagcg gcgaggatca cggtggtgta
      301 gccgccgatg gccatgaacc cgatgttggc cagcgtcagc tgcccggcga agagcgtcac
      361 ccagatcgag atcgccagca gcgcgttcac tcccatctgg ccgacgagga gttgatgggc
      421 gcggtaccag ccctgcgggt cggtgaacag tgatgtgacg aaggtcatgg cgtgacgtcc
      481 ccgccgtcag gcccgctcgg cggccggcga cgcgaacagc ccgcccggtc gcacgaccag
      541 catgccgaac agcgcggcga aggcgacggc ggcccgcacg ttcgccccga atccgagcag
      601 ggcgagcacc tcgaccatgc cgaggagata ggcggcgacg atgctgcccc tgatcgaccc
      661 gacgccgccc aggacgatga ccgccagccc ccggagctcc acctgatccc gaccgatata
      721 gggcgagatg tcgccgatcg tgaccccgta gaggatcccg gccaggccgg ccatcgccga
      781 actggccacc accgtccaca agacgatccg gtccacgtcg atgccgagga ggcaggcggc
      841 ccgggggttc tcggcgaccg cccgcatcgc ccgtccgacc tgggtccggt tcaccacgac
      901 gccgagcacc gccatgagca gcaccgagat caccaccgtg gcgaccttgt cggccggcat
      961 ggccaggcga ccgacatgcc agacgcggtc ggggaccgtc ccggccggga agcgaacaga
     1021 attggccccg tccctccaca cgaaggacag ccagccgccg ccgcggctct gctcgaccag
     1081 cgccacgaac accaacgaga ggccgatggt cgaaatcagc ggagcgatct ccggcgcttg
     1141 gcgccggcgc agcggacgga gcgcgcccag ttcgatcacc agcccgagtc ccgcggccgc
     1201 cagcagcccg gccggagcgg ccagccagat gggcgcgcca tggaacacca ccagcccgta
     1261 ggtgatcgcc gccgccagca tgaacacgcc ggagtgggcc agattcacga cgccgagcac
     1321 accgaagacg agggtgtacc cgacggcgaa gacagcgtag atcgacccga ggaacacccc
     1381 gttgacgagt tgctggacga cgtccacggc gggaagacgc cgggccggtc aggacgccgg
     1441 cgggacggac gccacgaggc tgtagccgcc cgcgccgtcc atggcgacga tgtacaccgt
     1501 ctgcttcacg tcgtggtcgg cggtgaatcg gaagggcccg agcggcgtgt cgatcgtcgt
     1561 ggccgccagc gcgtcgcgga gccggcgccg ggtggcggcg aggtcgccgg tgcgcgccgt
     1621 gcgagcgagg gcgtcggcga gaatgcggac cccggtgtag gcctgggccg ccagctggtc
     1681 gggatccgcg ccgtagcggc cgcggaaggc cttcacgaag gccacggtcg ccggggaatc
     1741 gttgccggcg aagaacgggc tggccgactg ggcgcccttg ccggccccgc ccgcctgctt
     1801 cgacaccgcc gccgagttga acccctgccc cccgaggaag tctccgttcc agccgagctg
     1861 gcgggcggtg agcatcacct tggcgggtat gccccccagc gaggcgatga agatggcgtc
     1921 cgggttcgcc tggactgcct tcgtgacata gggagccagg tcggtctcgg ccttggtgaa
     1981 ggcgatctcg ccggtgaggt ggaccccgag gcgggcggcg gcctgcttca gcgtggtggc
     2041 gccgtcgacc gagaacttgt cgtcgttcgg atagagcagg gcgatgccct tggggtggtg
     2101 ggcgtcgaca tagtgctgca gcgtgagggg aatggcagcc gcctcggaga cgctgtccct
     2161 gaatatccag ccgtcgcagt aggtgcagcc cggcccgacg atgttgaagc cgctgttgct
     2221 cacccccatc atcggggtcc gggcgtgggc ggcgatcggg tgggcggcca ccgcggagtt
     2281 ggacagggtc ggaccgagga gggcgagcac cttctcctgg ctga
//
LOCUS       DATGJT010000445         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_371978, whole genome shotgun sequence.
ACCESSION   DATGJT010000445 DATGJT010000000
VERSION     DATGJT010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371978"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..169
                     /gene="rpmE"
                     /locus_tag="VKX24_07595"
     CDS             <1..169
                     /gene="rpmE"
                     /locus_tag="VKX24_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013779890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HLJ08386.1"
                     /translation="CSCGNTFVTRSTSRELHVELCNECHPFYTGKQKLVDTGGRVERF
                     EKKYGRRAPRV"
     gene            208..1275
                     /gene="prfA"
                     /locus_tag="VKX24_07600"
     CDS             208..1275
                     /gene="prfA"
                     /locus_tag="VKX24_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013779159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HLJ08387.1"
                     /translation="MLERLEQIEARYNEVQAKLQDPEILTRPAALRELGKINAELEPV
                     VSVYRRYRRALDEADAAQKMAKEEADPEMRALAEAEVATQEAAATRCQDELRALLAPK
                     DPNDDKNVIVEIKAGEGGEESALFAGDLFRMYQRYAERRGYKSEVLSSQPSDMGGFKD
                     VTFEVRGKGAFSRLKHEAGVHRVQRVPDTESQGRVHTSAAGVLVLPEAEEFDVQIDPR
                     DLEIDVYHSSGPGGQSVNTTDSAVRITHKPSGLVVACQEERSQLQNREKAMRLLRSRL
                     YQAEQERRQADLVATRRSQVRDVDRSQKIRTYNFQQDRVTDHRIQMSVNQLPQVLAGD
                     LDPFIEVLIEKERTEQLGATD"
     gene            1286..2137
                     /gene="prmC"
                     /locus_tag="VKX24_07605"
     CDS             1286..2137
                     /gene="prmC"
                     /locus_tag="VKX24_07605"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HLJ08388.1"
                     /translation="MEPTVREWLRGAAARLAGSVDSPRVDAEVLLGHVLGASRSSLFA
                     EGDRALTGPERSALDELVERRCAGEPLQYLTGHQAFRTLDIAVGPGVLVPRPETEIVV
                     ETALRHLDGVEAPLVADIGTGSGAIALSVAAERPDATVWATEISPEAVAWAERNRVAA
                     GAANVTVVTGDLFAPLPAGLRGRLDLVVANPPYLTDVQVGSAAPDVRDHEPWVALVSG
                     PTGLEVPSRVIDDATVWLRPGGWLVMETWPGQAEDLIGLMGHRYVDAGAVADLAGSLR
                     AVAARKP"
BASE COUNT          345 a          787 c          798 g          296 t
ORIGIN      
        1 ctgctcctgc gggaacacgt tcgtcactcg ttcgacgagc cgtgagcttc acgtcgagct
       61 ttgcaacgag tgccacccct tctacacggg caagcagaag ctggtcgaca ccggtggccg
      121 cgtcgagcgg ttcgaaaaga agtacgggcg ccgggcgccg cgggtctgac ccgccgctga
      181 cggcggccgc cggccggggg acgcacgatg ctggaacgcc tggaacagat tgaggcgcgc
      241 tacaacgagg tccaggccaa actccaggac cccgaaattc taacgcgccc cgccgccctg
      301 cgcgagctgg gcaagatcaa cgcggagctg gagccggtcg tttccgtgta ccgccgctat
      361 cgaagggcgc tggacgaggc ggacgccgcc cagaagatgg ccaaggagga agccgacccc
      421 gagatgcggg cgctcgccga ggccgaggtc gccacccagg aggcggcggc cacccgctgc
      481 caggacgagc tgcgggcgct gctggcgccg aaggacccca acgacgacaa gaacgtgatc
      541 gtcgagatca aagcgggcga gggcggcgag gaatcggccc tcttcgccgg cgacctgttc
      601 cgcatgtacc agcgctatgc cgagcggagg ggctacaagt ccgaggtgct ctcctcgcag
      661 ccgtcggaca tgggcggctt caaggacgtg accttcgagg tgcgcggcaa gggtgccttc
      721 tcccggctca agcacgaggc cggggtccac cgggtccagc gggtgccgga caccgagtcg
      781 cagggccggg tgcacacctc ggccgccggg gtgctcgtgt tgcccgaggc cgaggagttc
      841 gacgtccaga tcgacccgcg cgacctggag atcgacgtct accactccag cgggccgggc
      901 gggcaatcgg tcaacaccac cgactcggcg gtgcgcatca cccacaagcc gtccgggctg
      961 gtggtcgcct gccaggagga acgctcgcag ctgcagaacc gggagaaggc gatgcggctg
     1021 ttgcgctccc ggctgtacca ggccgagcag gaacggcgcc aggccgatct cgtggccacc
     1081 cggcgcagcc aggtgcgcga cgtcgaccgc tcgcagaaga tccgcaccta caactttcag
     1141 caggaccggg tgaccgacca ccgcatccag atgtcggtca accagctccc gcaggtgctg
     1201 gccggcgacc tcgacccgtt catcgaggtc ctgatcgaga aggagcgcac cgagcagctg
     1261 ggcgccaccg actgatcccg ccgtggtgga accgaccgtg cgggagtggc tccgcggggc
     1321 cgccgcccgg ctcgccgggt cggtcgacag cccccgggtc gacgccgagg tcctcctggg
     1381 ccatgtgctc ggggcgtctc ggagctccct gtttgccgag ggcgaccggg cgctgaccgg
     1441 tccggaacgc tcggccctcg acgagctggt cgagcgccgc tgtgccggcg agccgctcca
     1501 gtacctgacc gggcatcagg cgttccggac cctcgacatc gccgtcgggc cgggcgtgct
     1561 cgtgccccgc ccggagaccg agatcgtcgt cgagacggca ctccgccacc tcgacggggt
     1621 cgaggccccg ctggtcgccg acatcggcac cggctcgggg gcgatcgcgc tgtcggtggc
     1681 cgccgagcgc ccggatgcca ccgtctgggc caccgagatc agccccgagg ccgtcgcctg
     1741 ggcagagcgc aaccgcgtgg cggcgggggc agccaacgtc accgtcgtca ccggggacct
     1801 gttcgcaccg ctgccggccg ggctgcgcgg gcggctcgac ctcgtcgtcg ccaacccgcc
     1861 ctacctgacc gatgtgcagg tgggctccgc cgcccccgac gtccgtgacc acgagccctg
     1921 ggtggccctg gtctccggcc caaccgggct tgaggtcccg agccgggtga tcgacgatgc
     1981 cacggtctgg ctcaggcctg gggggtggct ggtgatggag acctggccgg gccaggcgga
     2041 ggacctgatc ggcctgatgg gccaccggta cgtcgacgcc ggggcggttg ccgacctggc
     2101 cggctcgctg cgggcggtcg ctgcccgaaa gccatgagcg gccgggtggc gtcgtctaga
     2161 ctcacgccca tcatgaagat cgccatcgcc tccgaccacg ccgggttccc cctgaagacg
     2221 ctgctg
//
LOCUS       DATGJT010000446         2721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_372008, whole genome shotgun sequence.
ACCESSION   DATGJT010000446 DATGJT010000000
VERSION     DATGJT010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372008"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VKX24_07610"
     CDS             complement(<1..313)
                     /locus_tag="VKX24_07610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08389.1"
                     /translation="MAVVVTGERDPTVLWRERIELVGGTLPRQPYHAVADLSPTGKQG
                     AQLIARVEKAAAKRAVAATARIIATHGVSAVGIVGGGRTIPENLERVLASHAYLHAAE
                     GE"
     gene            517..1056
                     /locus_tag="VKX24_07615"
     CDS             517..1056
                     /locus_tag="VKX24_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08390.1"
                     /translation="MPNPFVESIATNFDAALRLIEAALTDCPERLWERDLWPDEAPTG
                     PAEYGGLHGSAPWFLGYHALTCLDYDLSGDFEPWSPPPPFDDNTYSFPNRVFTQPELV
                     TYVGWCRGRVDKTLGLLTEEAAARPLPRSHRHHPTTYGVLIGGIPLHLVEHASQIRQF
                     LSASGVSVQPMPGDRGFSG"
     gene            complement(1088..1504)
                     /locus_tag="VKX24_07620"
     CDS             complement(1088..1504)
                     /locus_tag="VKX24_07620"
                     /EC_number="3.1.3.16"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF012982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dual specificity protein phosphatase"
                     /protein_id="HLJ08391.1"
                     /translation="MAVDQLNASVWLGTAGEAHTLVARGVEYLVDLRAEATPATMTIP
                     VDHIPIEDLARDQDEPILFAARRVKELADSGVVVGVYCQAGVSRTAAVAIGYLMLEGM
                     SLDDATARLRECRPDSLPALGLWRSLEAIENRLEGP"
     gene            complement(1521..2447)
                     /locus_tag="VKX24_07625"
     CDS             complement(1521..2447)
                     /locus_tag="VKX24_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014208556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08392.1"
                     /translation="MAGMLEGRVAVVTGAGRGIGAGVARLLAHEGAKVVVNDLGVALD
                     GTGADNTPAAQVVEEIKQAGGEAVVNGDDVSDFAASESMIRQAIDTYGKLDVLVNVAG
                     ILRDRMVFNMSEEDWDAVIRVHLRGTFNTVRHASAYWRELRDADAHHRIINFTSGSGL
                     HGAPGQPNYAAAKMGIVGFTYSCANALGRYGVTANAIAPGAATRMTESVPEGRRRAPQ
                     NEASDERSPDNVAPSVAYLASERSDWCTGQVLSARGYEIGLYNVPQVIRQIASPGPWD
                     LETAARLMESSFRPAVSQGGRGGPGAQQAPRG"
BASE COUNT          339 a         1014 c          990 g          378 t
ORIGIN      
        1 gctccccttc ggcggcgtgc aggtacgcgt gcgacgccag cacgcgctcg aggttctcgg
       61 ggatcgtgcg cccgcctccc acgatgccta cggcgctcac cccgtgggtg gcgatgatcc
      121 gcgcggtcgc ggcaacggcc cgcttcgccg ccgccttctc gacccgggcg atgagctgcg
      181 ccccctgctt ccccgtcggg ctgaggtcgg cgaccgcgtg gtacggctgg cggggcagcg
      241 tcccgccgac gagctcgatc cgctcgcgcc acagcaccgt cggatcacgt tccccggtca
      301 cgaccacggc caccgcccaa cccgagtggg cccgccagcc gagcccgacc gcagtcgccc
      361 tcggccgtcg cccgcgctgg cctccggatc cacccgaggg cgttgctcca gccgtcgtgg
      421 cccggggcat gccgaacctt acggccgggc ggggaggagc cgggcgtcgg tcacccggcg
      481 ttggccgacg cgccccgatg tcggataatg gggtccgtgc cgaacccgtt cgtggagagc
      541 atcgccacca acttcgacgc cgcgctccgg ctgatcgaag cggcgctgac cgactgcccc
      601 gagcgtctgt gggagaggga cctgtggccg gacgaggccc cgaccggccc cgcggaatat
      661 gggggactgc acgggtccgc gccgtggttc ctcgggtacc acgcgctgac gtgcctcgac
      721 tacgacctgt cgggcgactt cgagccctgg tcgccgccgc cgcccttcga cgacaacact
      781 tactccttcc cgaaccgggt gttcacccag cccgagctcg tcacctacgt cggctggtgc
      841 cgcggccggg tcgacaagac gctcggcctc ctcaccgagg aggcggcggc ccggccgctc
      901 cctcgctccc accggcacca ccccacgacc tacggcgtcc tgatcggcgg gatcccgctg
      961 cacctcgtcg agcacgcctc gcagatccgc caattcctga gcgcgtcggg ggtcagcgtg
     1021 cagcccatgc ccggggaccg cggcttcagc gggtgacccc ccggtggggt cgacggccgg
     1081 gtcccgctca ggggccttcg agacggttct cgatcgcctc cagtgagcgc cacagtccga
     1141 gcgcggggag cgagtcggga cggcactccc ggaggcgggc ggtggcgtcg tcgaggctca
     1201 tgccctcgag catgaggtag ccgatcgcca ccgccgcggt gcgggagacg ccggcctggc
     1261 agtagacgcc gacgacgacg cccgagtcgg ccaactcctt gacccgccgg gccgcgaaca
     1321 ggatcggctc gtcctggtcc cgggccaggt cctcgatcgg gatgtggtcc accgggatcg
     1381 tcatggtggc cggcgtcgcc tcggcgcgga ggtcgaccag gtactccacc ccgcgggcga
     1441 ccagcgtgtg ggcctcgccg gccgtgccga gccagacgct cgcgttcagc tggtcgacgg
     1501 ccacggccgg ccgggcccga tcagcctcgg ggcgcctgct gggcccccgg gccgccgcga
     1561 ccaccctggc tgacggccgg gcggaaggag gactccatga gccgcgccgc ggtctcgagg
     1621 tcccagggcc cgggggaggc gatctggcgg atcacctggg gcacgttgta gaggccgatc
     1681 tcgtagcccc gggccgagag gacctgcccg gtgcaccagt ccgagcgctc gctggcgagg
     1741 tacgcgaccg acggggcgac gttgtcgggg gagcgctcgt cgctggcctc gttctggggg
     1801 gcgcgccggc ggccctcggg caccgactcg gtcatgcggg tggccgcgcc gggggcgatg
     1861 gcgttggccg tgaccccgta gcggccgagg gcgttggcgc acgagtaggt gaagccgacg
     1921 atgcccatct tggcggccgc gtagttcggc tggccggggg ccccatggag ccccgaaccc
     1981 gaggtgaagt tgatgatccg gtggtgggcg tcggcgtcgc gcagctcgcg ccagtaggcg
     2041 ctggcgtgcc ggaccgtgtt gaaggtcccc cggaggtgga ccctgatcac ggcgtcccag
     2101 tcctcctcgc tcatgttgaa caccatgcgg tcgcgcagga tcccggccac gttgacgagg
     2161 acgtcgagct tcccgtaggt gtcgatggcc tggcggatca tcgactcgga ggcggcgaag
     2221 tccgacacgt cgtcgccgtt cacgacggcc tcgccgccgg cctgcttgat ctcctcgacc
     2281 acctgggccg ccggcgtgtt gtcggcgccg gtcccgtcga gcgcgacccc gaggtcgttc
     2341 acgaccacct tggccccttc gtgggcgagc agccgggcga ccccggcgcc gatcccgcgt
     2401 ccggcaccgg tcaccaccgc aacccgtcct tcgagcatcc cagccatgcg tcccctccct
     2461 gcgagccgac cggatcaggg cgaccaggtc gaaggtgaga tcgtcattgt gtcgtcgccg
     2521 gggccgaggg gcaaaggtcg ggccgggcgc tagccggggg cgccggccgg cgcgaaccgc
     2581 cgggcgtgcg gccggtgctc gccgaccagc cggcccctgg ccagcgcctc gaggaactgt
     2641 tgcggcccgt cgaagtcggg catctccacc cacgccgccc cgacgccggg cgggtcgtgg
     2701 gcgtcggagc cggcggccac g
//
LOCUS       DATGJT010000447         2227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1509476, whole genome shotgun sequence.
ACCESSION   DATGJT010000447 DATGJT010000000
VERSION     DATGJT010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1509476"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1254
                     /locus_tag="VKX24_07630"
     CDS             <1..1254
                     /locus_tag="VKX24_07630"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HLJ08393.1"
                     /translation="NDDFIRTTEPRHYRAVQEMLQKVYDGGDIELGTYEGLYCVACEA
                     YYVEDELVDGNCPIHGRPVQRMREENYFFKLSRYQDRLLAHYDAHPEAVQPETRRNEV
                     LGFIRQGLQDFSISRTSISWGVPIPWDPRHVAYVWFDALINYCTAMGYGSDRERFEHW
                     WPVDYHLVGKDILRFHAVYWPAMLMAAGEAPPKCVFAHGWLLVGGEKMSKTRLNQIAP
                     GDLVAAFGSDGVRYHFLRDQNFGPDGDFSYEAMVARYNADLANNFGNLASRVLNMAVN
                     YLGGAAPAERENGPLREQSAAALEGLSAGMAKLDFAGGFGAVWELIRSANAYIEDRAP
                     WALQKAGDGAAVAAVLGDCLEVLRLVALLASPIIPDAAGELWRRLGLAGTPEDQRLPA
                     AAAWGSLPAGSALERGPALFPRLEG"
     gene            1259..2065
                     /locus_tag="VKX24_07635"
     CDS             1259..2065
                     /locus_tag="VKX24_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HLJ08394.1"
                     /translation="MPVAWIDAHCHLQFEGRGPTPEEAVARAVEAGVERMVCIGTDLA
                     TSAEAVRLAGAFPEVWASVGLHPHDASRLAGEWDGLVELAGAERVVGIGEAGFDLYYR
                     HSEPDAQEAAFRAQIALAHERGLPLIIHSRDAWAETFAALRSEGVPTRTVFHCFTGGP
                     GEAERALGLGCWLSYSGIVSFKTADDLRAAAAATPADRLLVETDSPFLAPVPHRGKAN
                     EPAFLPAVGAALAAARGEPVETVAEVTRANALAFFWAPDTPSGLSSNTSL"
BASE COUNT          300 a          826 c          788 g          313 t
ORIGIN      
        1 aacgacgact tcatccgcac gacggagccc cggcactacc gggccgtcca ggaaatgctg
       61 cagaaggtct acgacggtgg cgacatcgag ctcggcacct acgaggggct gtactgcgtg
      121 gcctgcgagg cctactacgt cgaggacgaa ctggtcgacg gcaactgccc gatccacggc
      181 cggccggtcc agcggatgcg ggaggagaac tacttcttca agctctcccg ctaccaggac
      241 cgcctcctcg cgcactacga cgcccacccc gaagcggtgc agcccgagac ccggcgcaac
      301 gaggtgctgg gcttcatccg ccagggcctg caggacttct cgatctcccg cacgtcgatc
      361 agctggggcg tgccgatccc ctgggatccc cgccatgtcg cctacgtctg gttcgacgcc
      421 ctgatcaact actgcacggc catgggctac ggctccgacc gggagcgctt cgagcactgg
      481 tggcccgtcg actaccacct ggtcgggaag gacatcctcc gcttccacgc cgtctactgg
      541 ccggccatgc tcatggccgc cggcgaggcc ccgccgaagt gcgtcttcgc ccacggctgg
      601 ctgctggtcg gcggcgagaa gatgagcaag acgcggctca accagatcgc cccgggggac
      661 ctggtggccg ccttcgggtc ggacggggtg cgctaccact tcctccgcga ccagaacttc
      721 ggcccggacg gcgacttcag ctacgaggcc atggtcgccc gctacaacgc cgacctggcc
      781 aacaacttcg gcaacctggc cagccgggta ctgaacatgg ccgtgaacta cctcggcggc
      841 gccgccccgg cggaacggga gaacgggccg ctgcgggagc agtcggcggc ggccctcgag
      901 gggctctcgg cgggaatggc gaagctcgac ttcgccggcg ggttcggggc cgtatgggag
      961 ctgatccgct cggccaacgc ctacatcgag gaccgggcgc cgtgggcgct gcagaaggcc
     1021 ggcgacggcg ccgccgtggc cgccgtcctc ggcgactgcc tcgaggtcct gcggctggtg
     1081 gcgctgctgg cgtcgccgat cattcccgac gccgccggcg agctctggcg ccgcctcggg
     1141 ctggccggca cgccggagga ccagcgcctc cccgccgccg cggcgtgggg ctcgctgccg
     1201 gccgggtcgg ccctggagcg gggcccggcc ctattccccc ggctcgaagg ctgaccgggt
     1261 gccggtcgcc tggatcgacg cccactgcca tctccagttc gagggccggg gcccgacccc
     1321 ggaggaggcg gtggcccggg ccgtcgaggc cggcgtcgag cggatggtgt gcatcggcac
     1381 cgacctggcc acttccgccg aggccgtccg gctggccggg gcgttccccg aggtgtgggc
     1441 cagcgtcggc ctccaccccc acgacgcctc gagactggcc ggcgagtggg acggcctcgt
     1501 ggagctggcc ggcgccgagc gggtggtggg catcggcgag gcgggcttcg acctctacta
     1561 ccgccactcc gagcccgacg cccaggaggc ggccttccgg gcccagatcg ccctggccca
     1621 cgagcggggg ctgccgctga tcatccactc ccgcgacgcc tgggcggaga cgttcgccgc
     1681 tctgcggtcg gaaggggttc cgacccggac ggtcttccac tgcttcaccg gcggcccggg
     1741 cgaggcggag cgggcgctcg ggctcggctg ctggctgtcg tactccggga tcgtctcgtt
     1801 caagaccgcc gacgacctgc gggcggcggc cgccgcgacc ccggccgacc gcctgctggt
     1861 ggagaccgat tcgccgttcc tggcgcccgt cccccaccgg gggaaggcca acgagccggc
     1921 cttcctgccg gcggtcggcg cggcgctggc cgccgcccgc ggcgagccgg tggagaccgt
     1981 ggccgaggtc acccgggcca acgccctggc gttcttctgg gccccagaca ccccctccgg
     2041 cctgtcaagt aacacttcgc tctgaggtca cagctacctc agagccaacg gttctgaacg
     2101 gatgtttcgg cgcgggagga cgcagcgtgg gcacggttgc cgcccgccga acggcctcgt
     2161 tagcgtgccg cgatgccctc caccagccca gataccgcgc cgcgccgccg ccggtggagt
     2221 ttgtccg
//
LOCUS       DATGJT010000448         2784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_889230, whole genome shotgun sequence.
ACCESSION   DATGJT010000448 DATGJT010000000
VERSION     DATGJT010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889230"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..646)
                     /locus_tag="VKX24_07640"
     CDS             complement(110..646)
                     /locus_tag="VKX24_07640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08395.1"
                     /translation="MRPSVSDGVEVRRHPRTIGWVGTTALAMGGSNQSLFLLSALLVS
                     QGSAAVPLLIVGLALSWAALPGWTELILMWPDRVGGIAATCAEAFRPYSPVLANLTGT
                     CYWWGWVPTCGLTALLSASALHEWYLPFVPVKVLALGLVIGFTALTWPECDASPGWRS
                     PSPRARRRWRSCPGSCRW"
     gene            complement(699..1352)
                     /locus_tag="VKX24_07645"
     CDS             complement(699..1352)
                     /locus_tag="VKX24_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08396.1"
                     /translation="MTVSISLIREHTVKIKPPRALWVPFPFGLPLGHPENVAEQRAVL
                     DAAFGLLDAPEFPVLRDFAGDLGEGETGTSIQAAAVEPSAVALPLADEATAMRRYWEQ
                     WSERAGRTAVGVSGVAPVKFRGVVRFLEAFVDGEERRLPEQGDTPLPLFIRYCADDLR
                     VLYLEARLVMKPGETQADTQRWFWGETALGAFLRTLRDLMNDSDDELMRGCAYGIAR"
     gene            complement(1410..1880)
                     /locus_tag="VKX24_07650"
     CDS             complement(1410..1880)
                     /locus_tag="VKX24_07650"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HLJ08397.1"
                     /translation="MPRLAALPQIQRNMLLTRAVEINDGAPRAGLARPLPEATVAIVT
                     SAGIHSRGDRPFGRDDPSLRVIPSGAGAGDLLQSHSSLAFDKTAFIRDVNVVFPIDRL
                     AELTAEKRIGRVGPRHYSVMGALQDVSVMADETAPALARRLVEDGVDVVLLTPT"
     gene            2026..>2784
                     /locus_tag="VKX24_07655"
     CDS             2026..>2784
                     /locus_tag="VKX24_07655"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HLJ08398.1"
                     /translation="MTRNERRRGSRAARPQRRRRLVATVFAPRSRFWHLVVVVGLASG
                     ITGALYIAAMKGLTKLLSGDVWSRPAHLVVLGLVGLAIGLITLALGNPGDVELLVDNI
                     HLNGGKSDIRDLRSLIPVSLLGIAAGSAIGPEAPLVQTTGSIGNWISIRRRLGVVDSR
                     SLTITGMACGFAVLFGAPLGSAIFALEILHRRGLEYYEALMPAGIGALTGYGLYILLN
                     RVGFQTVWRFPEPHNLGGVGLAVGVGAGVFGAIVA"
BASE COUNT          424 a         1029 c          953 g          378 t
ORIGIN      
        1 aagccgatca ggtacagccc ggccatggcg ctggtgatgc cgccgaagag gccggcgaac
       61 ggcgtgacga gatggaacga tgccgcccgg tgccagtcga cgtggcccgt caccaccggc
      121 acgatcccgg acaggaacgc cagcgccgcc gagcccgagg cgatggcgac cgccacccgg
      181 gtgacgcgtc gcattccggc caggttagcg ccgtgaatcc gatgacgagg ccgagggcca
      241 gcaccttcac cggcacgaac gggaggtacc actcgtgcag tgccgaggcc gacagcaacg
      301 ctgtcagacc gcaggtcggc acccaacccc accagtagca ggtcccggtc aggttggcca
      361 ggaccgggct gtagggccgg aaggcctcgg cgcaggtggc ggcgatgccc cccacccgat
      421 cgggccacat caggatcagc tccgtccaac ccggaagggc cgcccaactg agcgccagcc
      481 ccacgatcag cagcgggacg gcggcgctcc cctgcgacac cagcagcgcc gagagcagga
      541 acaggctctg gttgctgccg cccatcgcca gggcggtggt gccgacccac ccgatcgtcc
      601 ggggatgccg gcggacctcg accccgtcgc tgacgctggg acgcacgacc cctcatcggc
      661 agcagtcgcc gcaaaatgag aacaacctgc cggggaggtt accgggcgat gccgtaggcg
      721 cagccccgca tgagctcgtc atcggagtcg ttcatcaggt cccgcagcgt ccgcaggaag
      781 gcgccgaggg cggtctcgcc ccagaaccag cgctgggtgt cggcctgggt ctcgcccggc
      841 ttcatcacca ggcgggcctc gaggtagagg acgcggaggt cgtcggcgca gtagcggatg
      901 aacagcggga gcggcgtgtc gccctgttcg ggcaaccggc gctcctcccc gtcgacgaag
      961 gcctccagga agcggacgac gccgcggaat ttcaccggcg ccacgcccga gacgccgacc
     1021 gccgtccggc ccgcccgctc cgaccactgc tcccagtagc gccgcatcgc cgtcgcctcg
     1081 tcggccagcg ggagcgccac ggccgacggc tccaccgctg cggcctggat cgacgtgccg
     1141 gtctcgccct ctccgaggtc accggcgaag tcccgcagca ccgggaactc cggggcgtcg
     1201 agcaggccga aggcggcgtc gaggaccgct cgctgctcgg ccacattctc cggatggccg
     1261 agcggcagcc cgaacgggaa cggcacccac agcgcccggg gcggcttgat cttgacggtg
     1321 tgctcccgga tgaggctgat gctcaccgtc accagcccgg cttcttccag gcgccgtgcg
     1381 accacaccga ccgtgtggct gcacaacggt caggtgggcg tgagcaggac gacgtcgacg
     1441 ccgtcctcga ccagccgccg ggccagcgcc ggagcggtct cgtcagccat caccgacacg
     1501 tcctggagcg cgcccatcac cgagtagtgg cggggcccga cccggccgat ccgcttctcg
     1561 gccgtgagct ccgccaaccg gtcgatcggg aagacgacgt tgacgtcgcg gatgaaggcc
     1621 gtcttgtcga aggccaggct gctgtgcgac tgcagcaggt cgccggcacc ggcgccggac
     1681 gggatgacgc gcagcgacgg gtcgtcccgg ccgaagggcc ggtcgccccg gctgtggatc
     1741 ccggccgagg tgacgatggc caccgtcgcc tccggcagtg gccgggccag gcccgcccgg
     1801 ggcgcgccgt cgttgatctc caccgcccgg gtgagcagca tgttccgctg gatctggggc
     1861 agtgcggcca gacggggcat cgcccgattc tacgtaccgc tctgttccgg tcccgggccc
     1921 cgggcggcgt tcgaattacg tgtatagtac aactactttg cccaacgcca gcgcgccggg
     1981 gtggagtcct ccgccgaagg gcccgagatc tatcgtgcag acgacatgac gcgcaacgag
     2041 cggcggaggg gatcccgagc ggcacggcca caacgccggc gacggctcgt cgccaccgtc
     2101 ttcgcccccc gcagccgctt ctggcacctc gtcgtcgtcg tcggcctcgc ctcgggcatc
     2161 accggcgccc tctacatcgc ggccatgaag ggcctgacca agctgctgag cggcgacgtc
     2221 tggagcaggc cggcccacct ggtcgtcctg ggcctggtcg gcctggccat cggcctgatc
     2281 acgctggccc tcggcaaccc gggcgacgtg gaactgctcg tcgacaacat ccatctcaac
     2341 ggcggcaagt ccgacatccg ggacctgcgg tcgctcatcc cggtctcgct gctcgggatc
     2401 gccgccggca gcgccatcgg gcccgaggcg ccgctggtcc agaccaccgg ttccatcggg
     2461 aactggatct ccatacggcg caggctcggc gtcgtcgact cccggtcgct caccatcacc
     2521 gggatggcct gcggcttcgc cgtcctcttc ggggcaccgc tcgggtcggc catcttcgcc
     2581 ctcgagatcc tccaccggcg gggcctcgag tactacgagg cgctgatgcc ggccggcatc
     2641 ggtgcactca ccggctacgg gctctacatc ctcctcaacc gggtcggctt ccagaccgtc
     2701 tggcggtttc cggaacccca caacctcggc ggcgtcgggc tggccgtcgg ggtcggcgcc
     2761 ggcgtcttcg gggcgatcgt cgcc
//
LOCUS       DATGJT010000449         2629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_991406, whole genome shotgun sequence.
ACCESSION   DATGJT010000449 DATGJT010000000
VERSION     DATGJT010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991406"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1159)
                     /gene="dnaE"
                     /locus_tag="VKX24_07660"
     CDS             complement(<1..1159)
                     /gene="dnaE"
                     /locus_tag="VKX24_07660"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HLJ08399.1"
                     /translation="MSDSFVHLHLHTEFSMLDGAARISDVMAAAAADGQPAIGITDHG
                     NMYGVLDFYNAARKEGIRPIIGMEGYFVAGSRHDRPRRAEHEIFHLTLLSETTKGYEN
                     LIKVSSAAYLDGFFYKPRLDFELLEQHREGLIATSGCLGGVICQALLKDDLDGALAAA
                     GRFQEILGKDNFLVELQDHGLPEQHRTNPQLIEIAKRIGAPLLATNDSHYVHKHDAES
                     HDALLCVQTGATRDDPNRFKFDAEEFYLKTAAEMRALFAEVPEACDNTLWIAERANVD
                     IEFGKAVLPSFPTPSGHTEDSYLRELTEEGARQRYGEPIPAEARQRIDYELGVISEMG
                     FSAYFLVVWDLIKHARDRGIRVGPGRGSAAGCCVAYCLRIVDLDPLKYGLFF"
     gene            1316..1870
                     /locus_tag="VKX24_07665"
     CDS             1316..1870
                     /locus_tag="VKX24_07665"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HLJ08400.1"
                     /translation="MRFCPNCAAPLPHRPPLRCPACGAEHWRNAKPCAGALVTDGDGR
                     LLLLRRNTDPWLGWWDIPGGFCDAEEHPMAAAVRETGEETGLAVEVTGYLGMWLDRYP
                     GPDDPDHVVTLNAYYHAVVVGSAGTPDPHETSEIGWFGPDELPEIAFDHARLVLAAWR
                     DAVRDGRTVTPLPDRLSEAGPGGG"
     gene            complement(1842..2087)
                     /locus_tag="VKX24_07670"
     CDS             complement(1842..2087)
                     /locus_tag="VKX24_07670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08401.1"
                     /translation="MIRFIVGLCIEGALGGVALRAILPGEQDWSIPQTLLIGLVAWII
                     VGLVVRIVLGVVAGLVLPILLLGGAALYFNRRRALPR"
     gene            complement(2102..>2629)
                     /locus_tag="VKX24_07675"
     CDS             complement(2102..>2629)
                     /locus_tag="VKX24_07675"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ08402.1"
                     /translation="YDGVDKVAHEYGILDGYFPAEQVAADHLVGDLLDVLPADAALVI
                     TADHGQVQFERWVTMEPVARHVRAYAGDARLRYLYARPGGEAELLKAAEDAFGDDAWV
                     FGRDQLIDEGWLGPEPPPGDVIGRIGDVTLAGRGNVAFADPTHPHETRLLAGHGSLSP
                     DEMLVPLLAGRGRRA"
BASE COUNT          374 a          910 c          961 g          384 t
ORIGIN      
        1 cgaagaacag gccgtacttc aacgggtcga ggtcgacgat ccgcaggcag taggccacgc
       61 agcagccggc cgccgacccc cggcccggcc cgacccggat gccccggtcg cgggcgtgct
      121 tgatcaggtc ccacacgacg aggaagtagg ccgagaaccc catctcggag atcacgccga
      181 gctcgtagtc gatccgctgc cgggcctcgg ccgggatcgg ctcgccgtag cgctggcggg
      241 cgccctcctc ggtcagctcc cggaggtagg agtcctccgt gtggcccgat ggcgtgggga
      301 acgacggcag cacggccttg ccgaactcga tgtcgacgtt ggcccgctcg gcgatccaca
      361 gcgtgttgtc gcaggcctcg gggacttcgg cgaacagcgc ccgcatctcc gccgccgtct
      421 tcaggtagaa ctcctcggcg tcgaacttga agcggttcgg gtcgtcgcgg gtggcgccgg
      481 tctggacgca gagcagggcg tcgtgggact cggcgtcgtg cttgtggacg tagtgcgagt
      541 cgttggtggc cagcagcggc gcgccgatcc gcttggcgat ctcgatcagc tgcgggttcg
      601 tccggtgctg ctcggggagg ccgtggtcct gcagctcgac gaggaagttg tccttcccga
      661 ggatctcctg gaagcggccg gcggcggcca gggcgccgtc gaggtcgtct ttcagcagcg
      721 cctggcagat caccccgccg aggcagccgc tggtggcgat cagcccctcg cggtgctgct
      781 cgagcagctc gaagtcgagc cggggcttgt agaagaaccc gtcgaggtag gcggccgagc
      841 tgaccttgat gaggttctcg tagcccttgg tcgtctccga cagcagcgtg aggtggaaga
      901 tctcgtgctc ggcccgccgg ggccggtcgt ggcgggagcc ggccacgaag tacccctcca
      961 tgccgatgat cggccggatc ccctccttcc gggcggcgtt gtagaagtcg aggacgccgt
     1021 acatgttgcc gtggtcggtg atcccgatcg ccggctggcc gtcggcggcg gcggcggcca
     1081 tgacgtcgct gatccgcgcc gctccgtcga gcatcgagaa ctcggtgtgg agatggaggt
     1141 ggacgaagga gtcgctcaac cgtcggcctt cacccggggt acgggggtgt cccccggaat
     1201 ctcagtgtcc acagcctgtg gacggactgt ggaaaatcac acgactgtag ttaccgttcg
     1261 cagagtacgg agtccggcaa ccgggcgcaa gcggccgctg tggtaatcca gggcgatgcg
     1321 gttctgcccc aactgcgccg ccccgctccc gcatcgcccg ccgctgcggt gcccggcctg
     1381 cggcgccgag cactggcgca acgccaagcc gtgcgccggg gcgctggtca ccgacgggga
     1441 cgggcggctc ctgctgctgc gccggaatac ggacccctgg ctcggctggt gggacatccc
     1501 cggcgggttc tgcgacgccg aggagcaccc gatggccgcc gccgtccggg agaccggcga
     1561 ggagacgggc ctcgccgtcg aggtcaccgg ctatctcggg atgtggctcg accggtaccc
     1621 cggccccgac gaccccgacc acgtcgtgac cctcaacgcc tactaccacg cggtggtcgt
     1681 cggatcggcc ggcacccccg atccccacga gacgtcggag atcggctggt tcgggcccga
     1741 cgagctcccg gagatcgcct tcgaccacgc ccggctggtg ctcgccgcct ggcgcgacgc
     1801 cgtgcgcgac ggccgcaccg tcacgccgct gcccgaccgg ctcagcgagg cagggcccgg
     1861 cggcggttga agtagagggc cgccccgccg agcagcagga tcgggaggac cagcccggcc
     1921 acgacgccga ggacgatgcg gaccacgagg ccgacgatga tccaggccac caggccgatc
     1981 aggagcgtct gcgggatgga ccagtcctgc tcgccgggaa ggatggcccg cagcgccact
     2041 ccgccgagcg ctccctcgat gcacaggccg acgatgaatc ggatcatggg cgctgactcc
     2101 ttcaggctcg ccggccgcgg ccggccagga gggggacaag catctcgtcg gggctcaggc
     2161 tgccgtggcc ggccaggagc cgggtctcgt ggggatgggt cgggtcggcg aaggcgacgt
     2221 tccccctgcc ggccagtgtg acatcgccga tccggccgat gacgtcgccc gggggcggct
     2281 cggggccgag ccatccctcg tcgatcagct ggtcgcgccc gaagacccag gcgtcgtcgc
     2341 cgaaggcgtc ctccgccgcc ttgagcagct cggcctcccc tcccggacgg gcgtagaggt
     2401 accgcagccg ggcgtcgccg gcgtaggccc ggacgtggcg ggccaccggc tccatcgtca
     2461 cccagcgctc gaactgcacc tgcccgtggt cggcggtgat gaccagggcg gcgtcggccg
     2521 ggaggacgtc gaggaggtcg ccgacgaggt ggtcggcggc cacctgctcg gccgggaagt
     2581 acccgtcgag gatcccgtac tcgtgggcca ccttgtcgac gccgtcgta
//
LOCUS       DATGJT010000450         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1304477, whole genome shotgun sequence.
ACCESSION   DATGJT010000450 DATGJT010000000
VERSION     DATGJT010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304477"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..557
                     /locus_tag="VKX24_07680"
     CDS             51..557
                     /locus_tag="VKX24_07680"
                     /inference="COORDINATES: protein motif:HMM:NF016874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside 2-deoxyribosyltransferase"
                     /protein_id="HLJ08403.1"
                     /translation="MSSVYVASPLGFAEPGRHYLTHVLHPRLAAAGWSVLDPWEDETG
                     AVAETFALPPGPARLEALVRMSRAIGARNRALLAAADAVLAVLDGPDADSGTAAEIGW
                     AAAQRIPVVGWRSDFRRADHEAAPVNLQVEDFVLVSGGRMAATLDEALAALECLRTAG
                     GAGTGPCP"
     gene            complement(571..762)
                     /locus_tag="VKX24_07685"
     CDS             complement(571..762)
                     /locus_tag="VKX24_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08404.1"
                     /translation="MAQVWFCLACDDQPPWTADIARPCPTCQSTADVKKAQRFGNLFT
                     DEDGDPHLKDNMPMPKDGR"
     gene            1006..1677
                     /locus_tag="VKX24_07690"
     CDS             1006..1677
                     /locus_tag="VKX24_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019929760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HLJ08405.1"
                     /translation="MIKGADWPLLRSLTDEDRRRVLAAARRRRFARREVLFHEGDPGD
                     TLHLVDKGRVAIRITTPLGDVATVGVVGRGDVVGEMAVLEDAGRRGATVIALEPTETL
                     SIDRNQFCELRRRHPGVDLFIFDVLTATIRRVDRHLTDALFVPVDRRVLRRLLALTEI
                     YAGGDQTTGVEVTLTQDDLASLAGTSRATVNRVLRQAEEAGAVSLGRGRIRITDPALL
                     ATRAR"
     gene            complement(1680..>2112)
                     /locus_tag="VKX24_07695"
     CDS             complement(1680..>2112)
                     /locus_tag="VKX24_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015579409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08406.1"
                     /translation="VNVSSCAGRVGGLPIHGSYMASKHALSVLSDSLAAEVKPFGIRV
                     VCIEPGFFRTPIFTKSTVPTDADSPYRTLDEAVVRFMFDGVDGGADTDAVAAAVLDAI
                     DHDDGRIHFLVGDDAEAFVAQDRASTDAELQAFYAEVLGVG"
BASE COUNT          286 a          757 c          782 g          287 t
ORIGIN      
        1 catccgcccg attcaccgac cggagcggcg tagcgtgcca cagtgacgcg gtgagctcgg
       61 tctatgtcgc cagcccgctc ggcttcgccg aaccgggccg ccactatctc acccacgttc
      121 tccacccgcg gctcgccgcc gccggctggt cggtgctcga cccctgggag gacgagaccg
      181 gcgcggtggc cgagaccttc gcccttcccc cggggccggc ccgcctcgag gcgctggtgc
      241 ggatgagccg cgccatcggc gcacgcaacc gtgccctgct ggccgccgcc gacgccgtgc
      301 tggccgtcct cgacgggccg gacgccgatt cggggaccgc cgccgagatc ggatgggcgg
      361 cggcgcagcg gattccggtg gtcggatggc gaagcgattt ccgccgggcc gaccacgagg
      421 cggccccggt caatcttcag gtcgaggact tcgtgctcgt ctccggcggg cggatggccg
      481 ccaccctgga cgaggcgctc gccgccctcg agtgcctccg caccgccggc ggcgcaggga
      541 cggggccgtg tccctagcgt cggctgcggc tcagcggccg tccttcggca tcggcatgtt
      601 gtccttcagg tgcgggtcgc cgtcctcgtc cgtgaacagg ttcccgaacc gctgggcctt
      661 cttgacgtcg gccgtcgact ggcacgtggg gcagggccgg gcgatgtcgg ccgtccacgg
      721 aggctgatcg tcgcaggcga gacagaacca gacctgggcc atgcccggca gggtagcccg
      781 gacggcgagc ggtgggagcg caggacaggc ggccgggcgg acgcgccggg gcgagggtca
      841 agcacggctg cgtccgcgtg actgtggccg ccgtgacaca ccgagcgaca ggcccggcaa
      901 cgtccggggt cggcgccacc ggtagcttgc ggggatatga ccagtgccac cgccgttcgg
      961 cgctcatcgc cgggaggacg ctcgcccggc gcacacgatg ggaccgtgat caaaggtgcc
     1021 gactggccac tgctgcgttc cctcacggac gaggaccgcc ggcgggtcct ggcggcggcc
     1081 cgccggcggc gtttcgcccg ccgggaggtg ctgttccacg agggcgaccc gggtgacacg
     1141 ctccacctgg tcgacaaggg ccgggtggcg atccggatca ccacgccgct gggtgacgtc
     1201 gccacggtcg gcgtcgtcgg ccggggcgac gtggtggggg agatggcggt cctggaggac
     1261 gccggacggc gcggcgccac cgtgatcgcc ctcgagccga ccgagacgct gtcgatcgac
     1321 cgcaaccagt tctgcgagct gcgccgccgc caccccggcg tcgacctgtt catcttcgac
     1381 gtcctgaccg ccaccatccg cagggtcgac cggcacctga ccgacgcctt gttcgtgccc
     1441 gtcgaccgcc gggtcctgcg gcggctcctg gcgctgaccg agatctacgc cggcggcgac
     1501 cagacgacgg gagtcgaggt gaccctcacc caggacgacc tcgccagcct ggccggcacg
     1561 tcccgggcca ccgtcaaccg ggtgctgcgc caggccgagg aggcgggagc ggtgtcgctc
     1621 ggccggggtc gcatccggat caccgacccg gcactgctgg ccacgcgggc ccgctgagat
     1681 cacccgacgc cgaggacctc ggcgtagaag gcctggagct cggcgtcggt ggaggcccgg
     1741 tcctgggcga cgaaggcctc ggcgtcgtcg ccgacgagga agtggatccg gccgtcgtcg
     1801 tgatcgatgg cgtcgagcac cgcagcggcg acggcgtcgg tgtcggcgcc cccgtcgacg
     1861 ccgtcgaaca tgaaccggac caccgcctca tccagtgtcc ggtaggggga gtcggcgtcg
     1921 gtgggcaccg tcgacttggt gaagatcggg gtgcggaaga accccggttc gatgcacacc
     1981 acccggatcc cgaacggctt cacttcggcg gccaacgagt cgctcagcac gctgagggcg
     2041 tgcttgctcg ccatgtagga gccgtggatc ggaaggcccc cgacccggcc cgcacaggac
     2101 gagacgttga cg
//
LOCUS       DATGJT010000451         2375 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_889768, whole genome shotgun sequence.
ACCESSION   DATGJT010000451 DATGJT010000000
VERSION     DATGJT010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889768"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1028)
                     /locus_tag="VKX24_07700"
     CDS             complement(<1..1028)
                     /locus_tag="VKX24_07700"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ08407.1"
                     /translation="MARASVLTAEPPRPAARGRTHSAAAVSDPVGSYLDEIGRVPLLT
                     GAQERELAERIGDGVKAEALGSREELDLPAIAALARARLGPVAVADLTPERALELCRR
                     LQRDGLAARAALIEANLRLVVSIAKRYRGKGMQLLDLIQDGNLGLIRAVERFDPSRGF
                     KFSTYATWWIKQNISRALADRDRVVRLPVHVVNSVAAIKRLQRDLVQDLGRQPKVEDL
                     AAELGIGVEEVKRLLTYCKETLSLDVPIGEQARSHLGDYIPDEGAEEPPEAAVEVMMR
                     EQVGSALGALSKTERSVIELRYGLSDDVQRTLDEAGAIVGLTRERVYRIERRALCKLR
                     HPCTAHTLR"
     gene            complement(1221..1826)
                     /locus_tag="VKX24_07705"
     CDS             complement(1221..1826)
                     /locus_tag="VKX24_07705"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ08408.1"
                     /translation="MNVLIVEDDPVISLGLEQKLTELGYGLAGRAGTGSQAVERAREL
                     KPDIILMDVMIPEFDGLEAARRISAAGLRVPVVAITAHEDPDLVERAISVGVAAYLMK
                     PVSRAQLRSALELARSRQNEFETLRSENADLRQALATRKLVERAKGVLMDQGGLTEAD
                     AFSAIQQQARRTGRTMAEVAGEIVRSSEVLAQARRSRRGPP"
     gene            complement(1823..>2375)
                     /locus_tag="VKX24_07710"
     CDS             complement(1823..>2375)
                     /locus_tag="VKX24_07710"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HLJ08409.1"
                     /translation="AAKPKASLPDVVEVTLGRVQAVAAVHALLSASDNGRVRTRVVLE
                     RVLALLSERAGSGIPVRARVEGTCPDLDPQRGTWLAIAVNELATNAIVHGFRGGGGQL
                     TLWLEEGADCRVVLEDDGVGCAGATEGLGLSLVRRLVTEGLHGTFDLCSDGPGTTAEI
                     VFPAMAPPLGPARTPRPATAGRA"
BASE COUNT          337 a          884 c          808 g          346 t
ORIGIN      
        1 cgcaacgtgt gcgccgtgca cgggtggcgc agcttgcaca acgcccggcg ctcgatgcgg
       61 tagacacgct cccgggtcag tccgacgatc gccccggcct cgtccagcgt tcgctggacg
      121 tcgtcggaca acccgtaccg gagttcgatc acgctgcgct cggtcttgga cagggcgcca
      181 agggccgagc caacctgctc gcgcatcatc acctcgaccg ccgcctcagg gggttcctcg
      241 gccccctcgt cggggatgta atcgccgagg tgggagcggg cctgctcgcc gatcgggaca
      301 tcgagcgaca gcgtctcctt gcagtaggtg agcagccgct tgacctcctc gaccccgatg
      361 ccgagctccg ctgccaggtc ctcgaccttc ggctggcggc cgagatcctg gacgaggtcc
      421 cgttgcagcc tcttgatcgc cgccaccgag ttgacgacgt gcaccgggag gcggaccacc
      481 cggtcccggt cggcgagcgc ccgggagatg ttctgcttga tccaccaggt ggcgtaggtc
      541 gagaacttga agccccgcga ggggtcgaac cgctccaccg ctcggatgag cccgaggttg
      601 ccgtcctgga tcaggtcgag gagctgcatg cccttgcccc ggtaccgctt ggcgatcgac
      661 accaccagcc gcaggttggc ctcgatcagt gccgcccggg ccgccaggcc gtcccgttgg
      721 agccgacggc acagctcaag tgctcgttcc ggggtgagat cggccaccgc caccggcccc
      781 agccgggctc tggcaagagc ggcaatggct gggagatcaa gctcctcccg gctccccagc
      841 gcctcggcct tcacgccgtc gccgatccgc tctgccagct cccgctcctg ggcgccggtg
      901 agcaggggga cccggccgat ctcgtcgagg taggaaccga ccgggtcgct gacagctgcc
      961 gccgagtggg tccggccccg ggcggcgggg cgcgggggct ccgccgtgag gaccgacgcc
     1021 cgtgccatcc gatccaactc cgatctgctc tgcgctcacc gtgcttccgg gacacggcgc
     1081 ggcgctggaa tccatccagg caacaaaaaa agccgcgagt ccaaggggac tgcggcttcg
     1141 cggcctactc cgccaggtcg tcgtggaccc ggcgttaaca gcacgtcaat gttaccccag
     1201 gttcacccgg tagctccact tcacggcggg ccgcgacggg agcgccgcgc ttgggcaagc
     1261 acctccgacg agcgcacgat ctcccccgcc acctccgcca tcgtccggcc ggtccggcgg
     1321 gcctgctgct ggatggcgga gaaggcgtcg gcttcggtca ggcctccctg gtccatgagc
     1381 acccccttgg cccgctccac cagcttgcgg gttgccagcg cctggcgcag gtcggcattc
     1441 tccgagcgaa gagtctcgaa ctcgttctgg cgcgagcggg cgagctcgag ggccgagcgc
     1501 agctgcgccc ggctcaccgg cttcatcagg taggcagcga caccgactga gatcgcccgc
     1561 tcgacgaggt ccgggtcctc gtgggcggtg atggcgacga ccggcacccg gagccccgcc
     1621 gccgagatcc gccgggcggc ctcgagcccg tcgaactccg ggatcatcac gtccatcagg
     1681 atgatgtccg gtttcagttc ccgggctcgc tcgaccgcct ggctgccggt gccggcccgg
     1741 ccggccagcc cgtagcccag ctcggtgagc ttctgctcga gcccgagcga aatcaccggg
     1801 tcgtcctcga cgatcagtac gttcatgccc ggcccgcggt cgccgggcgg ggggtgcgcg
     1861 ccggccccag cggcggcgcc atggccggga acacgatctc ggccgtggtg cccggaccgt
     1921 cggagcagag atcgaaggtg ccatgcagcc cctcggtcac caggcgccgc accaggctga
     1981 gcccgaggcc ctcggtcgcc ccggcgcacc cgacgccgtc gtcttccagc accacccggc
     2041 agtcggcacc ctcctcgagc cacagtgtca gctggccgcc cccaccccgg aagccgtgga
     2101 cgatggcgtt ggtggcgagc tcgttgactg cgatcgccag ccaggtgccc cgctgcgggt
     2161 cgaggtcggg gcaggtcccc tccacccggg cacgcaccgg gatgccggaa ccggctcgct
     2221 cggagagcag ggcgagcact cgttccagca ccacgcgggt gcgcacccgg ccgttgtcgc
     2281 tcgccgagag caaggcgtgc accgcggcga ccgcctgcac ccgcccaagg gtgacttcga
     2341 cgacgtcggg cagggacgcc ttgggcttgg ccgcc
//
LOCUS       DATGJT010000452         2954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1304815, whole genome shotgun sequence.
ACCESSION   DATGJT010000452 DATGJT010000000
VERSION     DATGJT010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304815"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VKX24_07715"
     CDS             <1..328
                     /locus_tag="VKX24_07715"
                     /inference="COORDINATES: protein motif:HMM:NF021445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /protein_id="HLJ08410.1"
                     /translation="TIFHLKAEGYRGLTLNFATLRAVLAGETGDGVSQRIERWLLQKM
                     SGTMQIESLWHFNAKYDPEWRPRYAVYESPGNMLPAAWAVAKAESFVELPLIGRMLAP
                     KSDTAA"
     gene            401..1060
                     /locus_tag="VKX24_07720"
     CDS             401..1060
                     /locus_tag="VKX24_07720"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08411.1"
                     /translation="MHRVLIVEDEPDLAEALDDGLRRHGFETERVGTRAAALDRASSA
                     DLVLLDLSLPDGDGLDLCPRLAGQVGLVVISGRTDEADRVAALEMGADDYITKPFGAR
                     ELVARCRSVLRRTKPRNGSVVRAGDLEVDVERYEARRQGQPVDLTTKELGLLVALARR
                     PGVLVRREELAEEVWGTGLWPVNRSLDVHMSSLRRKLGDTPRQPRYVQTVHGLGFRLL
                     P"
     gene            1137..1523
                     /locus_tag="VKX24_07725"
     CDS             1137..1523
                     /locus_tag="VKX24_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08412.1"
                     /translation="MAEPQPTQVGPEELADLAWMVDCAIRFGERKQAAALAERLLEEL
                     SRHYRAMRPLRLRCAPHVGAALADEAFGLIGDVEQLTSFLPDGDDEGAAGDALADDRP
                     LIQLRPRVERLVAHEAAEMAALGQQF"
     gene            1534..2205
                     /locus_tag="VKX24_07730"
     CDS             1534..2205
                     /locus_tag="VKX24_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007572424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08413.1"
                     /translation="MRVLVVEDEVKMADLIKRGLEHEGYAVDLAGDGGEALWAAREFD
                     FDAIVLDAMIPDPDGFEVCRTLRSEGRWTPVLLLTARDGVDDRVQGLDAGADDYLTKP
                     FAFSELFARLRALTRRDLGARPTVLVVGDLVLDPATRQVRRGDTEISLSAKQFAILEQ
                     FMRRPGEVLSRADLLEHVWDFAYEGTSNLVDVYVRTLRERIDRPFGVDSIETVRGAGY
                     RLRAE"
     gene            2202..>2954
                     /locus_tag="VKX24_07735"
     CDS             2202..>2954
                     /locus_tag="VKX24_07735"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HLJ08414.1"
                     /translation="MTRRRFAPVSLRGRLALLFTAGSAIVLVLAGILIYLDLNGELNH
                     TINTGLEARATDIEGDIQAGRVAIRQEEAFAQILGPGATVIDSSAPAPPALSPAEVAR
                     ASRHNLFIDRRIPHTPALGRRARLLAHPVQSAGRTLVVVVGASTVAVFRGRERLALIL
                     AILSPLLGAILSAGGWLLAGAALRPVRRMSEEADAISLALAGRRLPYPEGEDEIAQLG
                     RTLNAMLDRIEAAFARERMFLDDASHELRTPIA"
BASE COUNT          386 a         1106 c         1034 g          428 t
ORIGIN      
        1 cacgatcttc cacctgaagg ccgagggcta ccgggggctc acgctcaact tcgccacgct
       61 gcgggccgtg ctggccggcg agacggggga cggtgtcagc cagcggatcg agcgctggct
      121 gctccagaag atgtcgggga ccatgcagat cgagtcgctg tggcacttca acgccaagta
      181 cgaccccgag tggcggcccc gctacgccgt ctacgagtcg ccgggcaaca tgctgccggc
      241 ggcgtgggcc gtggccaagg cggagtcctt cgtggagctg ccgctgatcg gccggatgct
      301 cgctccgaag agcgacaccg cggcctgaac cccgctgaac cgggcctcgt cggccccgac
      361 ttcatcgtcc ttacatggaa gtctttagat aattgccagc gtgcaccgag tattgatcgt
      421 cgaggacgag cccgatctgg ccgaagcgct ggacgacggc ctccgccgcc acggtttcga
      481 gaccgagcgg gtcggcaccc gggcggcggc cctcgaccgg gcctcctccg ccgacctcgt
      541 cctcctcgac ctgtcgctgc ccgacggtga cgggctcgac ctctgtcccc gcctggccgg
      601 ccaggtcggc ctcgtggtga tctccggccg gaccgacgag gccgaccggg tcgccgccct
      661 ggagatgggc gccgacgact acatcaccaa gcccttcggg gcccgggagc tcgtcgcccg
      721 gtgccgctcc gtcctgcgcc gcacgaagcc ccgcaacggg agcgtcgttc gggccggcga
      781 cctcgaggtc gacgtcgagc gctacgaggc ccgccgtcag ggccagccgg tcgacctgac
      841 caccaaggag ctcgggctgc tggtggcgct ggcccgccgg cccggcgtcc tcgtccggcg
      901 ggaagagctg gccgaggagg tctggggaac cggcctctgg ccggtgaacc ggtcgctcga
      961 cgtccacatg tcgtccctgc gccgcaagct gggcgacacg ccccgccagc cgcgctacgt
     1021 gcagaccgtc cacgggctcg gcttccgcct gcttccctga cagaccttga ttcatcgccg
     1081 gttcatcggt ccggcggcac gctgatcgag gtcaacgtcg agaggagagg taaccgatgg
     1141 cggagcccca gccgacccag gtcggccccg aggagctggc cgacctggcg tggatggtcg
     1201 actgcgccat ccggttcggg gagcgcaagc aggcggcggc gttggcggag cgcctcctcg
     1261 aggagctgtc ccgccactac cgggcgatgc ggccgctgcg gctgcgctgc gcccctcacg
     1321 tgggtgccgc cctggcggac gaggccttcg ggctcatcgg cgacgtcgag cagctgacct
     1381 ccttccttcc cgatggcgac gacgagggcg ccgccgggga cgccctggcc gacgaccggc
     1441 ccctcatcca gctccgcccc cgggtcgagc gcctcgtggc ccacgaggcg gccgagatgg
     1501 ccgccttggg ccagcagttt tagattcagc gtcatgcggg tgctcgtcgt cgaggacgag
     1561 gtcaagatgg ccgacctcat caagcgcggc ctggagcacg agggctacgc cgtcgacctc
     1621 gccggcgacg gcggcgaggc gctgtgggcg gcccgggagt tcgacttcga cgccatcgtc
     1681 ctcgacgcca tgatccccga cccggacggg ttcgaggtct gccgcacgct gcgctccgaa
     1741 ggccggtgga cgccggtgct gctcctcacc gcccgtgacg gcgtcgacga ccgggtgcag
     1801 ggtctcgacg ccggtgccga cgactacctc accaagccct tcgccttctc ggagctgttc
     1861 gcccggctgc gggcgctgac ccggcgcgac ctcggcgccc ggccgacggt gctggtggtc
     1921 ggcgacctcg tcctcgaccc ggccacccgc caggtccgcc ggggcgacac cgagatctcc
     1981 ttgtcggcca agcagttcgc catcctcgag cagttcatgc gccggccggg cgaggtcctc
     2041 tcccgggccg acctcctcga gcacgtctgg gacttcgcct acgagggcac gtcgaacctg
     2101 gtcgacgtct acgtccgaac attgcgggaa cggatcgacc ggccgttcgg cgtggacagc
     2161 atcgagacgg tccggggcgc cggctaccgg ttgcgggcgg agtgacgcgg cgccggttcg
     2221 ctcccgtctc gctgcggggc cgtctcgccc tgctgttcac cgccggcagc gccatcgtcc
     2281 tcgtcctggc cgggatcctc atctacctcg acctgaacgg cgagctgaac cacacgatca
     2341 acaccgggct cgaggcccgg gcgaccgaca tcgagggtga catccaggcc gggcgcgtcg
     2401 ccatccgcca ggaggaggcc ttcgcccaga tcctcgggcc gggggcgacc gtcatcgact
     2461 cgtcggcgcc ggcgcccccc gccctctcgc cggccgaggt cgcccgggcg tcgcgccaca
     2521 acctcttcat cgaccggcgg atcccccaca cgccggcgct gggccggcgg gcccggctgc
     2581 tggcccatcc ggtgcagtcc gccgggcgca cgctggtggt cgtcgtcggg gcctccaccg
     2641 tggccgtgtt ccggggccgg gagcgcctgg cgctgatcct ggccatcctg agcccgctgc
     2701 tcggcgccat cctctcggcc ggcggatggc tgctggccgg ggcggcgctg cggcccgtcc
     2761 ggcggatgag cgaagaggcc gacgccatct cgctggccct ggccgggcgg cggctgccct
     2821 acccggaggg cgaggacgag atcgcccagc tcggccgcac gctcaacgcc atgctcgacc
     2881 gcatcgaggc cgccttcgcc cgggagcgca tgttcctcga cgacgccagc cacgagctgc
     2941 ggaccccgat cgcc
//
LOCUS       DATGJT010000453         2645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_889967, whole genome shotgun sequence.
ACCESSION   DATGJT010000453 DATGJT010000000
VERSION     DATGJT010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889967"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..>2645
                     /locus_tag="VKX24_07740"
     CDS             218..>2645
                     /locus_tag="VKX24_07740"
                     /inference="COORDINATES: protein motif:HMM:NF021445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /protein_id="HLJ08415.1"
                     /translation="MDRAAAVDVAEVRDHLDIEVPLGGRALVASDMHLASPSTAASRQ
                     AARELALALEGWAGPGVVVLNGDIFELLLGEHGGDPAPALAAHPRFTAALARFAAEPN
                     RRIVYVVGNHDGRLAWDAAAARTVSTEIGAELCLAAELRFQTGAGPRLVRIEHGHRLD
                     PSNAFADPRNPLDVPVGHYVVKEALPALENAVWLAGVEHLADPASIPNFIASRLTYRK
                     MARYLGWLAVPLLLALAVKIPLVMAMAERRGRAAGLESWSRHLLMIGGVVFVDVALVG
                     ITVALGARQAWRAMAGGLGSLSSRAGNKAALGEAEALMRAGHAGYITGHTHRAELRPV
                     GDGFYANTGCCDEILVERPARLGLPPVFAAEQERTWVELEAGAELRVRLHHTRSPQPA
                     ERLLERLVARRRPDTPLRPAVVAEYPHGESWPQDETSLLRLRSVRRRASGVVAAAGVL
                     NLVSAVTPPLRYRLKWLLDAVPLAVPQVAAVAVALAGLGLLLLSMGVRRGQRRAWLVS
                     FLLLLGSVVLHLAKGVDVEEVAVAGLVAGYLLVHRKAFKVASDASSARAGLVWGAAGA
                     AVTTVVATAAAWLIKPYRGSRLSLHRAALAAVERLVGASSVPVAHRLDEFLSPVLAAV
                     GFGLVAVLGWQLLRPVIHRVYDHGRADRARAKSAVARYGADSLAYFALRDDKRYFFSG
                     ETVVAYAVLGGVALVSPDPIGPVGERAGAWAAFRRFADESGWIVACMGVTEDWLPIYR
                     ASGLRTMYVGDEALVDCSVFTLEGSRMKSLRQAYNRVKRGGYTVEFHDPARIDPVLAD
                     ELRALSLESRR"
BASE COUNT          284 a          989 c          976 g          396 t
ORIGIN      
        1 tcggcgagca caccgacgag gtcctgagtg gcatcctggg gatgtcggag ggggagatcg
       61 gccggctcca cgacgatggt gtggttgccg gggcggatgt catgagccgg tagaatttgg
      121 ggcggtttgt cccggttgtt catccccggc tcatgcacgt cgacttacca tcgtggtggt
      181 gcggggggct ttgacgcgat cgggtaggaa ccgggacatg gacagggcag ctgcggtcga
      241 cgtcgccgag gtgcgcgatc acctcgacat cgaggttccg ctcggcggac gggcgctggt
      301 ggcgagcgac atgcacctcg cctcgccgtc gaccgccgcc tcccgccagg ccgcccggga
      361 gctggccctg gctcttgagg gctgggccgg gccgggggtc gtcgtcctca acggcgacat
      421 cttcgagctc ctcctcggcg agcacggcgg cgatcccgcc ccggcgctgg ccgcccaccc
      481 ccgcttcacc gccgccctgg cccgcttcgc cgccgagccc aaccggcgca tcgtctatgt
      541 cgtcgggaac cacgacggcc gtctcgcctg ggacgccgcc gccgcccgca cggtgagcac
      601 cgagatcggc gccgagctgt gcctggccgc cgagctgcgc ttccagaccg gcgccgggcc
      661 ccgcctcgtg cggatcgagc acggccaccg cctcgacccg tccaacgcct tcgccgatcc
      721 ccgcaacccg ctcgacgtgc ccgtcggcca ctacgtggtg aaggaggcgc tgccggcgct
      781 ggagaacgcc gtgtggctgg ccggcgtcga gcacctggcc gatccggcgt cgatcccgaa
      841 cttcatcgcc tcccggctga cctatcgcaa gatggcccgc tatctcggct ggctggccgt
      901 gccgctgctg ctggccctgg cggtcaagat cccgctggtg atggccatgg ccgagcggcg
      961 gggccgggcc gcgggcctgg agtcgtggtc ccgccacctg ctgatgatcg gcggggtcgt
     1021 cttcgtcgac gtcgccctgg tcggcatcac ggtggctctc ggcgcccggc aggcctggcg
     1081 ggccatggcc ggcggcctgg ggtcgctcag cagccgggca ggcaacaagg ccgccctggg
     1141 cgaggccgag gccctcatgc gggccggcca tgcgggctac atcaccggcc acacccaccg
     1201 cgccgagctg cgcccggtcg gcgacggctt ctacgccaac accggctgct gcgacgagat
     1261 cctcgtcgag cggccggccc gcctcgggct cccgccggtc ttcgccgccg aacaggagcg
     1321 gacatgggtg gagctcgagg ccggcgccga gcttcgcgtc cgcctccacc acacccgttc
     1381 cccgcagccg gccgaacggc tcctggagcg gctggtggcc cggcgccgtc ccgacacgcc
     1441 gctgcggccg gcggtggtgg cggagtaccc ccacggggag tcgtggcccc aggacgagac
     1501 gagcctgctc cggctgcgca gcgtccgccg gcgggcgtcg ggggtggtgg ccgcggccgg
     1561 cgtcctcaac ctggtctcgg cggtgacccc gccgctgcgc taccggctca agtggctcct
     1621 cgacgccgtc ccgctggcgg tgccccaggt ggcggcggtg gccgtggccc tggcgggcct
     1681 cgggctgctg ctcctcagca tgggcgtgcg ccgggggcag cggcgggcct ggctggtgtc
     1741 gttcctgctg ctgctcggct ccgtcgtcct ccacctggcc aagggtgtcg acgtcgaaga
     1801 ggtcgccgtg gccggcctgg tggccggcta cctgctggtc caccgcaagg cgttcaaggt
     1861 ggccagcgac gccagctcgg cccgggccgg tttggtgtgg ggcgccgccg gcgccgccgt
     1921 gaccacggtc gtcgccaccg ccgccgcctg gctcatcaag ccctaccgcg gctcccggct
     1981 gtcgctgcac cgggcggcgc tggccgccgt cgagcgcctc gtcggcgcct ccagcgtgcc
     2041 ggtcgcccac cgcctcgacg agttcctctc gccggtgctg gccgccgtgg gcttcggcct
     2101 cgtggccgtc ctcggctggc agctgctccg gccggtcatc caccgggtct acgaccacgg
     2161 ccgggccgac cgggcccggg cgaagtccgc cgtcgcccgc tacggcgccg actcgctggc
     2221 gtacttcgcc ctgcgcgacg acaagcggta cttcttctcc ggcgagaccg tcgtggccta
     2281 tgccgtcctc ggcggcgtgg cgctggtgtc gcccgacccg atcgggccgg tcggggagcg
     2341 ggccggcgcc tgggccgcct tccggcgctt cgccgacgag tcgggctgga tcgtggcctg
     2401 catgggcgtg accgaggact ggctgccgat ctaccgggcc agcgggctgc ggacgatgta
     2461 cgtcggcgac gaggccctcg tcgactgctc ggtgttcacg ctcgaggggt cccgcatgaa
     2521 gtcgctccgc caggcctaca accgggtcaa gcggggcggc tacaccgtcg agttccacga
     2581 cccggcccgg atcgacccgg tgctggccga cgagctgcgg gcgctgtcgc tggagagccg
     2641 ccggg
//
LOCUS       DATGJT010000454         5441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_787005, whole genome shotgun sequence.
ACCESSION   DATGJT010000454 DATGJT010000000
VERSION     DATGJT010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5441
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787005"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VKX24_07745"
     CDS             complement(<1..206)
                     /locus_tag="VKX24_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008326737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ08416.1"
                     /translation="MLDVSSLSVSYGSARVLYGVDLRVDDGEIVALIGPNGAGKTTAL
                     SAIGGLLPHEGRVTLDGEVLPTTP"
     gene            complement(206..1048)
                     /locus_tag="VKX24_07750"
     CDS             complement(206..1048)
                     /locus_tag="VKX24_07750"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08417.1"
                     /translation="MSSLGRSGPAAAVELAEHPPSRNGVGPRAQRDLLVIENLAISFG
                     GIRALSDVSVTARTGEVAGVIGPNGAGKTTLFNCISGLLTPDRGSITFDGHHLHSMGN
                     PMLRARRGIGRTFQTPRLFRSVSVGDNLMMGCRAAHAARRGYDFDPALRELGPEERAR
                     RIAGLVGYRGALDAPAASLSFGEMRVVELARALCASPSLLMLDEPASGLDVGQAQDLV
                     GLVRDLADLGLAVLLIEHDMSVVMGVCEDITVLDFGSVIARGAPGDIQQNQDVLDAYL
                     GKAH"
     gene            complement(1045..2076)
                     /locus_tag="VKX24_07755"
     CDS             complement(1045..2076)
                     /locus_tag="VKX24_07755"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ08418.1"
                     /translation="MSTTAEFQIQEPVVGDAGPTTRPGRMAPARPLAARGVGAFLLAT
                     FVLMGPKLFTWAGPPAAYDFGLTVAMLVVAVSVLAWIGEISLAVVAQMGLGMVALSWF
                     QDHTSFPLAVSLVLVTLSSIPTSLILGVFCLRLRGVNFVIASLAFAGMTQKAFFQKVL
                     GAATSLHGRVSRPAIVRSDGALYYLIVFSLIAVVAGLYLLQRSRVGTALASLRDSETA
                     FWTLGYSPAAYKLFVVCLSGAIATLAGAYYGLLQGTVPSFYFNPGLAIVYFGFAVAGG
                     MGSIGGAVGGGLFFGALPKYLEVLWPSIYNKFDFLFYGLVALLIIVWVPGGLAGVGRR
                     FWHRVEGRP"
     gene            complement(2073..2984)
                     /locus_tag="VKX24_07760"
     CDS             complement(2073..2984)
                     /locus_tag="VKX24_07760"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ08419.1"
                     /translation="MSKLLQVLVIGVIAGSIYGFIAMGMVLVYRTTGVLNVAHGGIGI
                     LSGYVAHELIHFRHQPYYEGVAGGVAVACLLGLLFELVVVRRLPGRPDLQTAATLGLY
                     TLLLGVVVTVPWWTTNAFQVLPSPLLNKTFRVPGTPESVTYDQVVLIVALALFSAGLY
                     WMLRRTRIGLAMRAVSDSSAAAGLMGIRPETVSRVLWIVGFGLSGLTTMLVAPITLLD
                     ANALSLLTLKALTVAFLGGLVSLPLTVAGGLILGTLEAFNDLYLVHLPDLKYAWPFIL
                     MVVALLWRAAEKRRSVRDDAPVVAAAA"
     gene            complement(3087..4739)
                     /locus_tag="VKX24_07765"
     CDS             complement(3087..4739)
                     /locus_tag="VKX24_07765"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ08420.1"
                     /translation="MKTKPTSRSIAVVALLALLGGACGGGSSNKTATGKPGEQAAAAA
                     GPVAAAQPDGASPAGTPQADPNGATAAAPVAAASGPAAGAAAGGTSSDAASKAGSAAP
                     GPAGRTAAAAAKSGPAASAAPGAATPGAAAPTAGGGSAPTPGVPANPGASGAPNGGAT
                     DVGVSATSIKVGHICICSGPVGGVGDDLSWAGQATMKWYNDNGGINGRKLDVLVRDDQ
                     WDGTKGMNAVRDLVEREGVFGFSASQTVPTNDLMGPYVDQKKVPNVGGDGWGEAQYGH
                     AWQFPTGNSATVDGYVLADYATKTQGAKTASIFYFDSPQGRSYVKGFTKQFEKDGGKV
                     VFSQPGTFDDPATSTYVARSRAENVDVSTYWGEPGLWVKMIREAASQAYRPKFGFQGC
                     ACNYFDEIPGLAGPWAEGSIATTGWTPNDLGEAAGAKMPGYAEYKAITEKYFPKIHHS
                     NWTKVGFTGAHLFGDTLKKLGLNVTRQGLKDALDQVRDFDLGLGAKVRIWPNSHRANH
                     TVYLVKLVKDNPGTSGGMRWKYLSGPFDDPVNSEGNDAPLTG"
     gene            complement(4751..>5441)
                     /locus_tag="VKX24_07770"
     CDS             complement(4751..>5441)
                     /locus_tag="VKX24_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08421.1"
                     /translation="ESARLASRAVNADWAKAIVVYRDDLAEDDREALKTATTTAQLDL
                     APVWIFWFADLSSPSEGHETLRELFDVGALTPGQGWSYAYIEDVVYPQVLGPIANHEV
                     ALAAYGGCEAGLAICQALLAAVDEGLGTQLTAFTPAKAKEVLGFPEHWFPLWVQLVGY
                     PAESPDAGGQRPRKPMAQIYCEGKYGNAFEPDEAVTEQLKAAGMIQESNGQDWRAAEV
                     RGLARMFGLPE"
BASE COUNT          845 a         1887 c         1955 g          754 t
ORIGIN      
        1 catggcgtcg tcggcagcac ctcgccgtcg agggtcaccc ggccttcgtg ggggaggagc
       61 ccgccgatgg ctgacagcgc cgtggtcttg ccggcgccgt tggggccgat cagcgccacg
      121 atctcgccgt cgtcgacccg caggtcgacc ccgtagagga cccgggcgct gccgtacgac
      181 acgctgagcg aggacacgtc gagcatcagt gggcctttcc cagataggcg tcgaggacgt
      241 cctggttctg ctggatgtcg cccggcgcac cccgagcgat gaccgagccg aagtcgagga
      301 cggtgatgtc ctcgcagacc cccatgacga cgctcatgtc gtgctcgatg aggagcaccg
      361 ccagccccag gtcggccagg tcccggacga gaccgacgag atcctgggcc tggccgacgt
      421 cgagacccga cgccggttcg tcgagcatca gcagggaggg cgaggcacac agggcgcggg
      481 ccagttcaac gacgcgcatc tccccgaagg agaggctggc ggcgggggcg tccagcgcgc
      541 cgcggtagcc gaccaggccg gcgatgcgcc gagcgcgctc ctccggcccc aactcccgca
      601 gcgccgggtc gaagtcgtag ccccggcggg cggcgtgggc cgcccggcag cccatcatca
      661 ggttgtcacc gaccgagacg ctgcggaaga gtcggggcgt ctggaacgtc cggccgatcc
      721 cccgccgggc ccggagcatg gggttgccca tcgagtggag gtggtggccg tcgaaggtga
      781 tggagccgcg gtccggcgtg aggagaccgg agatgcagtt gaacagcgtg gtcttgccgg
      841 cgccgttggg cccgatcacg ccggcgactt cgccggtccg ggccgtgacc gacacgtcgc
      901 tcagggcgcg gatgccgccg aaggagatgg ccaggttctc gatgaccagc aggtcccgtt
      961 gcgcccgggg tcccaccccg ttgcgcgacg gcggatgctc ggccagctcc accgccgcgg
     1021 cggggccgct ccgtccaagg ctgctcatgg gcgaccttcc acacggtgcc agaagcggcg
     1081 gccgactccg gccaggccgc cggggaccca gacgatgatc agcagggcga cgagcccgta
     1141 gaacaggaag tcgaacttgt tgtagatgct cggccagagc acctcgaggt acttgggcag
     1201 cgcaccgaag aacaggccac cgcccacggc gccgccgatc gaccccatgc cgccggccac
     1261 ggcgaagccg aagtacacga tggcgaggcc ggggttgaag tagaacgagg ggaccgtgcc
     1321 ctgcagcagg ccgtagtacg ccccggccag ggtggcgatc gcccccgaca ggcagacgac
     1381 gaacagcttg taggccgccg gcgagtagcc gagggtccag aacgccgtct cggagtcccg
     1441 cagcgaggcc agggccgtgc cgacccggga acgctgcagc aggtagagac cggcgacgac
     1501 ggcgatcagc gagaacacga tcaggtagta gagcgccccg tcgctccgca cgatcgccgg
     1561 ccggctgacc cggccgtgca gcgatgtcgc cgcccccagc accttctgga agaacgcctt
     1621 ctgggtcatg ccggcgaagg ccagggaggc gatgacgaag ttgacgcccc gcagtcgcag
     1681 gcagaacacg ccgaggatga gcgaggtggg gatcgacgac agggtgacca gcaccagcga
     1741 gacggccagc gggaacgacg tgtgatcctg gaaccagctg agcgccacca tcccgaggcc
     1801 catctgggcc acgacggcga gggagatctc gccgatccag gccaggaccg aaaccgccac
     1861 gacgagcatc gccacggtga ggccgaagtc gtaggccgcc ggcgggccgg cccaggtgaa
     1921 gagcttcggg cccatcagga cgaaggtggc cagcaggaac gccccgacac cccgggcggc
     1981 cagtggccgg gccggcgcca tccgcccggg ccgggtcgtg ggaccggcgt cgccgacgac
     2041 cggctcctgg atctggaact ccgcggtggt gctcatgccg ccgccgccac gaccggagcg
     2101 tcgtcccgca cggaccggcg cttctccgcc gcccgccaca gcagggccac gaccatgagg
     2161 atgaacggcc aggcgtactt gaggtcggga aggtggacga ggtagaggtc gttgaaggcc
     2221 tccagggtcc cgaggatcaa cccgccggcc accgtgaggg gcagcgacac cagcccgccg
     2281 aggaacgcca cggtcagcgc tttgagggtg aggaggctga gggcgttggc gtcgaggagc
     2341 gtgatggggg cgacgagcat ggtcgtcagg ccggaaaggc cgaagcccac gatccacagc
     2401 acccggctca ccgtctcggg tctgatgccc atgagcccgg cggcggcgga actgtccgac
     2461 accgcccgca tggccaggcc gatccgggtc cggcgcaaca tccagtacag cccggccgag
     2521 aacagcgcca gcgccacgat cagcaccacc tggtcgtagg tgacggactc gggagtgccg
     2581 ggaacccgga acgtcttgtt gagcagcggc gagggcagca cctggaaggc gttcgtcgtc
     2641 caccagggaa cggtgacgac gacgccgagg aggagcgtgt agagcccgag cgtcgccgcc
     2701 gtctgcagat cgggccggcc gggaaggcga cggaccacga ccagctcgaa gagcagcccg
     2761 aggaggcagg cgaccgccac gccgccggcc acgccctcgt agtacggctg atgccggaag
     2821 tggatcagct cgtgggccac gtacccggac aggatcccga taccgccgtg cgccacgttg
     2881 aggactccgg tggtgcggta gacgagcacc atgcccatgg cgatgaaccc gtagatcgac
     2941 cccgcgatca ccccgatcac gaggacttgc agcaatttgc tcatcccccg aactcccttg
     3001 ttgtgtcgtc gctccgggcg gtgggagccg gccggacctt gctccggctc ccaccgcaac
     3061 gtcggatggc gtgttggccc cggcgatcag ccggtgagcg gggcgtcgtt cccctcgctg
     3121 ttgaccgggt cgtcgaacgg gccggagagg tacttccagc gcatcccgcc gctcgtgccc
     3181 gggttgtcct tcaccagctt caccaggtag acggtgtggt tcgcccggtg gctgttaggc
     3241 cagatgcgga ccttggcccc gagcccgaga tcgaagtccc ggacctggtc gagggcgtcc
     3301 ttcagtccct gccgcgtcac gttgagcccg agcttcttca gcgtgtcccc gaagaggtgg
     3361 gcgccggtga acccgacctt ggtccagttc gaatggtgga tcttggggaa gtacttctcg
     3421 gtgatggcct tgtactcggc atagcccggc atcttcgccc cggcggcttc accgaggtcg
     3481 ttgggcgtcc agccggtcgt ggcgatcgag ccctcggccc acggcccggc cagccccggg
     3541 atctcgtcga agtagttgca ggcacagccc tggaagccga acttcggccg gtaggcctgg
     3601 gaggcggcct cccggatcat cttcacccac aggccgggct cgccccagta cgtcgacacg
     3661 tcgacgttct ccgcccggga acgggcgacg taggtcgagg tagccgggtc gtcgaacgtg
     3721 ccgggctggg agaagacgac cttcccgccg tccttctcga actgcttcgt gaaccccttg
     3781 acgtacgacc ggccctgcgg gctgtcgaag tagaagatcg acgccgtctt cgccccctgc
     3841 gtcttggtgg cgtagtcggc caggacgtag ccgtcgacgg tggcgctgtt gccggtcggg
     3901 aactgccagg cgtggccgta ctgggcctcg ccccacccgt cgccgccgac gttgggcacc
     3961 ttcttctggt cgacgtaggg gcccatcagg tcgttggtcg gaacggtctg ggaggcggag
     4021 aatccgaaca cgccttcccg ctcgacgagg tcccgtacgg cgttcatgcc cttcgtgccg
     4081 tcccactggt cgtcccgcac gaggacgtcg agcttgcgcc cgttgatgcc gccgttgtcg
     4141 ttgtaccact tcatggtggc ctggccggcc cacgacaggt cgtcgccgac gccgccgacc
     4201 gggcccgagc agatgcagat gtggccgacc ttgatcgagg tggcgctcac ccccacgtcg
     4261 gtcgcaccgc cgttgggagc cccgctcgcc cccgggttgg ccggaacgcc gggtgtgggt
     4321 gccgagccgc cgccggcggt cggtgccgcc gcccccggag tggcggcgcc cggtgcggcc
     4381 gaggcggccg gcccgctctt cgccgcggcc gccgcggtcc tgcccgccgg accgggagcg
     4441 gcgctgccgg ccttggaggc ggcgtcggag cttgtacccc ctgcggcggc gccggcggcc
     4501 gggcccgaag ccgcggcgac cggggccgcg gccgttgcgc cgttggggtc ggcttgcgga
     4561 gtaccggccg gtgaggcgcc gtcgggctgg gcggcggcga ccggtccggc ggcggccgcg
     4621 gcctgctccc ccggcttccc ggtggccgtc ttattggagg aaccgccgcc gcaggcccca
     4681 ccgagcaggg ccagcagggc caccacggca atcgagcgac tggtcggctt cgtcttcacg
     4741 gccatcaccg tcactccggc aacccgaaca tgcgggcgag gccccggacc tcggcggccc
     4801 gccaatcctg gccgttggac tcctggatca tcccggcggc cttcagctgc tcggtgacgg
     4861 cctcgtcggg ctcaaaggcg ttgccgtact tgccttcgca gtagatctgg gccatcggct
     4921 tgcgcggccg ctggccgccg gcgtcgggcg actccgccgg gtacccgacc agctgcaccc
     4981 acagcgggaa ccagtgctcg gggaagccca gcacttcctt ggccttggcg ggcgtgaagg
     5041 ccgtcagctg ggttccgaga ccctcgtcga ccgcggccag gagcgcctgg cagatggcca
     5101 accccgcctc gcaaccaccg taggcggcca gggcgacctc gtgattggcg atgggaccga
     5161 gcacctgggg gtagacgacg tcctcgatgt aggcgtagct ccagccctga ccgggcgtca
     5221 acgcgccaac gtcgaagagc tcccgcagcg tctcgtggcc ctccgacggc gaactgaggt
     5281 cggcgaacca gaagatccac accggggcca ggtcgagctg ggcggtggtg gtcgccgtct
     5341 tgagcgcctc gcggtcgtct tcggcgaggt cgtcgcggta gaccacgatg gccttggccc
     5401 agtcggcgtt caccgctcgg gaggccagcc gtgccgactc c
//
LOCUS       DATGJT010000455         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_60617, whole genome shotgun sequence.
ACCESSION   DATGJT010000455 DATGJT010000000
VERSION     DATGJT010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60617"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1731
                     /gene="glgX"
                     /locus_tag="VKX24_07775"
     CDS             <1..1731
                     /gene="glgX"
                     /locus_tag="VKX24_07775"
                     /inference="COORDINATES: protein motif:HMM:TIGR02100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HLJ08422.1"
                     /translation="VWMPRGIVVDPAFSWADDRPPRHPWNRTVIYECHVRSMTVRHPG
                     VPEHLRGTYLGLASDAVIDHLLGLGVTAVELMPVHHFVADRTLVERGLTNFWGYNSIG
                     FLAPHVGYATGGLGEQVSEFKSMVRTLHRAGLEVILDVVFNHTGEGNHLGPTLSLRGI
                     DNASYYRLVPDQPRYYLDFTGTGNSLNILHPRTMGLITDSLRYWVTDMHVDGFRFDLA
                     PVLVRGYEAGQPSAFFEIIQQDPVLSTVKLIAEPWDAGPDGYLLGRFPAGWSEWNGAF
                     RDCVRRYWRGDAGQVPELASRLTGSREIFAPSGRRTSASINFVTCHDGFTLTDLVTYD
                     HKHNEANGDENRDGADENYSRNWGVEGPTESVRIQRLRDRMKRNLLTTLFLSQGVPML
                     LGGDEIGSSQGGNNNAYCQDNEISWLDWDVGATGIDFMHFVRDLIAVLRANPILRRRN
                     FFNGEPISPGHAKDVTWIRPDGQEMTEPDWADPENRAIGMLLLGRAADEVDALGRAER
                     GDTLLVLLNAGNSSRSYTLPPVDGPGRWEELLSTLRPTGSFPRPLRNGAVNLGAQSCL
                     VLRHTERPGA"
BASE COUNT          301 a          769 c          667 g          284 t
ORIGIN      
        1 gtgtggatgc ccaggggcat cgtggtcgac cccgcgttca gctgggcgga cgaccgtccg
       61 ccccgccacc cgtggaaccg caccgtcatc tacgagtgcc acgtccgatc catgacggtc
      121 cggcatcccg gcgtgcccga gcacctgcgc ggcacctacc tcggcctggc ctccgacgcg
      181 gtgatcgacc acctgctcgg gctgggggtg accgcggtcg agctcatgcc cgtgcaccac
      241 ttcgtggccg accgcaccct cgtcgagcgc gggctcacca acttctgggg ctacaactcg
      301 atcggcttcc tcgcccccca cgtcggctac gcgacgggcg ggctcggtga gcaggtgagc
      361 gagttcaagt cgatggtgcg gaccctgcac cgggccggcc tcgaggtgat cctcgacgtc
      421 gtcttcaacc acaccggcga gggcaaccac ttggggccga ccctgtcgct gcggggcatc
      481 gacaacgcct cctactaccg gctcgtgccc gaccagcccc gctactacct cgacttcacc
      541 ggcaccggca acagcctcaa catcctgcac ccccgcacga tggggctcat caccgacagc
      601 ctccgctact gggtgaccga catgcacgtc gacgggttcc gcttcgacct cgccccggtg
      661 ctcgtgcgcg ggtacgaggc gggtcagccg agcgccttct tcgagatcat ccagcaggac
      721 ccggtcctct ccacggtgaa gctgatcgcc gagccctggg acgccgggcc cgacggctac
      781 ctgctggggc ggttcccggc gggctggtcg gagtggaacg gtgccttccg ggactgtgtg
      841 cgccggtact ggcgggggga cgcgggccag gtgcccgagc tcgcctcccg cctcaccggt
      901 tcccgggaga tcttcgcccc gagcggtcgg cgcacctcgg ccagcatcaa cttcgtcacc
      961 tgccacgacg ggttcaccct gaccgacctc gtcacctacg accacaagca caacgaggcc
     1021 aacggggacg agaaccgcga cggcgccgac gagaactaca gccgcaactg gggggtggag
     1081 ggcccgaccg agtcggtgcg catccagcgg ctccgggacc gcatgaagcg caacctgctc
     1141 accacgcttt tcctctccca gggcgtcccc atgctcctcg gcggggacga gatcggtagc
     1201 tcccagggcg gcaacaacaa cgcctactgc caggacaacg agatcagctg gctcgactgg
     1261 gacgtcgggg cgacgggcat cgacttcatg catttcgtcc gcgacctcat cgccgtcctc
     1321 cgcgccaacc cgatcctgcg gcgccgcaac ttcttcaacg gcgagcccat ctccccgggg
     1381 cacgccaagg acgtcacctg gatccgtccc gacggccagg agatgacaga gcccgactgg
     1441 gccgacccgg agaaccgggc gatcgggatg ttgctcctcg gccgcgccgc cgacgaggtc
     1501 gacgccctgg gacgcgcgga gcgcggtgac accctgctcg tcctgctcaa cgccggcaac
     1561 agctcccggt cctacaccct gcccccggtc gacgggccgg ggcgttggga ggagctcctg
     1621 agcacgctgc ggccgaccgg ctcgttcccc cggccgctcc gcaacggtgc ggtcaacctc
     1681 ggcgcgcagt cgtgtctcgt gctgcggcac accgagcgcc ccggcgccta gcgcgcccgt
     1741 cccggcgcac cgggaccttg gaccctggtc gcaggccacc ggtgccgggc accatcgcga
     1801 cagggcgagg gagcgcgcga tggcacagcg gccggcaggg gaccacgcgg cagcgggcgg
     1861 cggcccgtcc gtccgcggtc cggacgaggc ccgtgaccgg atgctggtgc tcgcctaccg
     1921 gtcgggggac cccgacgcgt tctcgatcat cttcgacgac cactaccccg agctgctcgc
     1981 ccaggcccgg gccgcgctcg ggttcggcgg gacggccgag g
//
LOCUS       DATGJT010000456         2979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_787041, whole genome shotgun sequence.
ACCESSION   DATGJT010000456 DATGJT010000000
VERSION     DATGJT010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787041"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2139
                     /locus_tag="VKX24_07780"
     CDS             <1..2139
                     /locus_tag="VKX24_07780"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HLJ08423.1"
                     /translation="IAGPTLAIAARIGFADGAGAFPTKTDEVPDIQDFTDIFVAAETP
                     TVYDLLIEIKPDNRVYFELPRMDIGQGIITTTTMMVADNLDVPYENMDTVLAPAEQRL
                     AAAQITGGSHNTRVLWDPIRVITARMRGQLMTAGSQKLGVPVSALRTENGYVVATDGR
                     KLSYGELSADAAKLPPAKVAMPKPASEYKIIGKPHTKYRARDIFTGKWQYSTDLFSSK
                     QFLPTVLAMAATHGASVVSIDDSEAKKIPGFIAVTHIPGMPDYLIPEAVAVTAETTGI
                     AKKAKNALKIKWSAGPMDQMSDAQIDDMLNGIVDKVTSPGEGLDAVFRWPYVPHAPMQ
                     ENAACADVKKDSAEIWSSDQIPNTGQRHVAETLGLPVEKVKYNLVPGGGAFGRHLFHD
                     EVVMVAQISQRVGKPIKLQWMREEGIKNGRCRPVSIHHVKATVANGDVVSFEHRMACP
                     EMDLRHGLGDVATGYVTEYNNEGACQYFFTHTQKLPYKFGPTAITLKQRLLAKPTAAW
                     RVVYSGQVGGVNEIVVRELAEALGKDEFEFRMANLDSERHRSVLEKAAHAAGWGKQLP
                     KGVAQGIGMHDEYKSIAAYVMTVDTRGKEPRMTAVHIAVDNGYCVNPTGTASSLLGQA
                     MDGFALAFRAGLHVDNGATRESNFHDYKWSRQFDSPLEATVDILPNSNVLPGGIGELG
                     IPAASAAAANAWARATGKKPRNFPLNEYGA"
     gene            2145..2606
                     /locus_tag="VKX24_07785"
     CDS             2145..2606
                     /locus_tag="VKX24_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016335901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HLJ08424.1"
                     /translation="MPNITFTLNGNPVTVDADKDEELLWVLRDRMDVHGLKYGCGMGL
                     CGACTSHIDGVAHRTCITPVSAVQGKSVTTIEGLAKGDQLHPVQQAWIDNDVAQCGYC
                     QAGQIMQAVSLLNQNPHPTDKDIDEAMGGNLCRCGTYFRIRSAIKQVAAGK"
     gene            2714..>2979
                     /locus_tag="VKX24_07790"
     CDS             2714..>2979
                     /locus_tag="VKX24_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012084835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLJ08425.1"
                     /translation="MRDIEELGDLVGAVAQSGLGYEDLRPGQEEAAAAVLAGHDVLAV
                     MPTGAGKSAIYQIAGTLIPGATVVVSPLIALQHDQVEAIGGDLGG"
BASE COUNT          548 a         1047 c          964 g          420 t
ORIGIN      
        1 attgccgggc cgacgctggc gattgcggct cgtatcgggt ttgccgacgg tgccggggca
       61 ttccccacga agaccgatga agttcctgac atccaggact tcaccgacat cttcgtggcc
      121 gccgagacgc ccacggtcta cgacctgctg atcgagatca agcccgacaa ccgggtgtac
      181 ttcgaactgc cccggatgga catcggccag ggcatcatca ccaccaccac gatgatggtg
      241 gccgacaacc tggatgtccc ctacgagaac atggacaccg tcctggcccc ggccgagcag
      301 aggctcgccg ccgcccagat caccggtggt tcccacaaca cccgtgtcct gtgggacccg
      361 atccgggtca tcaccgcccg gatgcggggc cagctgatga ccgccggctc ccagaagctc
      421 ggcgtcccgg tcagcgccct ccgcaccgag aacggctacg tcgtcgccac ggacggccgc
      481 aagctgtcct acggcgagct ctcggccgac gccgcgaagc tgccgccggc caaggtggcc
      541 atgccgaagc cggccagcga gtacaagatc atcggcaagc cccacaccaa gtaccgggct
      601 cgcgacatct tcaccgggaa gtggcagtac agcactgacc tcttctcctc gaagcagttc
      661 ctgcccaccg tcctggcgat ggcggccacg cacggtgcgt ccgtcgtgtc gatcgacgac
      721 tccgaggcca agaagatccc cggcttcatt gccgtcaccc acatcccggg catgcccgac
      781 tacctcattc ccgaggccgt cgccgttacc gctgagacca ccggcatcgc caagaaggcc
      841 aagaacgcgc tcaagatcaa gtggagcgcc ggcccgatgg accagatgtc cgacgctcag
      901 atcgacgaca tgctgaacgg catcgtcgac aaggtcacct cgcccggcga gggccttgac
      961 gccgtcttcc gttggccgta cgtgccgcac gctcccatgc aggagaacgc ggcctgcgcc
     1021 gacgtgaaga aggactcggc cgagatctgg agctccgacc agatcccgaa caccggccag
     1081 cggcacgtcg ccgagacgct cggcctgccg gtcgagaagg tcaagtacaa cctcgtcccc
     1141 ggcggtggcg ccttcggtcg tcacctgttc cacgacgagg tcgtcatggt ggcccagatc
     1201 tcgcagcgcg tcggcaagcc gatcaagctg cagtggatgc gggaagaggg catcaagaac
     1261 gggcggtgcc gcccggtctc gatccaccac gtcaaggcca ccgtggccaa cggcgacgtg
     1321 gtcagcttcg agcaccgcat ggcctgcccc gagatggacc tccgccacgg cctcggcgac
     1381 gtcgccaccg gctacgtcac cgagtacaac aacgagggtg cgtgccagta cttcttcacg
     1441 cacacccaga agctgccgta caagttcggg cccacggcca tcacgctcaa gcagcgcctg
     1501 ctggccaagc ccacggcggc gtggcgggtc gtgtactccg gccaggtcgg cggcgtcaac
     1561 gagatcgtcg tccgggaact ggccgaggcg ctcggcaagg acgagttcga gttccgtatg
     1621 gcgaacctcg actccgagcg gcaccgcagc gtcctggaga aggctgccca cgccgcgggc
     1681 tggggcaagc agctcccgaa gggcgtggcg cagggcatcg gcatgcacga cgagtacaag
     1741 tcgatcgcgg cgtacgtgat gacggttgac acccggggca aggagccgcg gatgaccgcc
     1801 gtgcacatcg ccgtcgacaa cggctactgc gtgaacccca ccggtacggc gtcgagcctc
     1861 ctcggccagg ccatggacgg attcgccctg gccttccggg ccggcctcca cgtcgacaac
     1921 ggggcgacgc gggaatcgaa cttccacgac tacaagtggt cgcgccagtt cgactcgccg
     1981 ctcgaggcga ctgtggacat cctgccgaac tccaacgtgc ttcccggcgg tatcggcgag
     2041 ctgggtatcc cggctgcgtc ggcggccgcc gccaacgcct gggcgcgagc cacaggtaag
     2101 aagccccgga acttcccgct caacgagtac ggagcctgat tgccatgccc aacatcacct
     2161 tcacactcaa cggcaacccg gtcaccgtcg acgccgacaa ggacgaggag ctcctctggg
     2221 ttcttcgtga ccgcatggac gtccacggcc tgaagtacgg ctgcggtatg ggcctctgtg
     2281 gcgcctgcac gagccacatc gatggtgtgg cccaccgcac gtgcatcacg cccgtgagcg
     2341 cggtccaggg caagagcgtg accacgatcg agggactggc gaagggtgac cagctgcacc
     2401 cggtgcagca ggcctggatc gacaacgacg tggcccagtg cggctactgc caggccggcc
     2461 agatcatgca ggccgtgtcg ctcctcaacc agaaccctca cccgacggac aaggacatcg
     2521 acgaggcgat gggcggcaac ctctgccgct gcgggacgta cttccgcatc cggtccgcca
     2581 tcaagcaggt cgcggccggc aagtagtcgc cagccgtagt accacctacg cagtcaaccg
     2641 gtgcgccgcc tggaggtccg ggcggcgcac cggcgcgttt cgacagcccg caccgccggg
     2701 gtaagagcag gccgtgcgcg acatcgaaga actcggcgac ctcgtcgggg cggtggccca
     2761 gtcgggcctc gggtacgagg acctgcggcc gggccaggag gaggcggcgg cggccgtgct
     2821 ggccgggcac gacgtactgg ccgtcatgcc gacgggagcg ggcaagtcgg ccatctacca
     2881 gatcgccggg acgctgatac cgggggcgac ggtggtcgtg tcgcccctca tcgccctgca
     2941 gcacgaccag gtcgaggcca tcggcggcga cctcggggg
//
LOCUS       DATGJT010000457         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_787480, whole genome shotgun sequence.
ACCESSION   DATGJT010000457 DATGJT010000000
VERSION     DATGJT010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787480"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1067
                     /locus_tag="VKX24_07795"
     CDS             <1..1067
                     /locus_tag="VKX24_07795"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HLJ08426.1"
                     /translation="VYGGAGPGVRLRQPDLARTLKTVAAEGPDAFYRGAVGAEAAAHV
                     RRIGGLLDRSDLAAHRGEWVEPLEGRYRDLTVAELPPNSQGSAALLALHVLDRAGPLP
                     PDGPERQHRLIEAVATALAERDAHLTDPAHMRLPPAVLADPARAEQIAAGGDPVGSVG
                     RVGGAARGAGGDTAYLCAVDASGLCVSLIQSNYNGFGSGVTVPGLGINLHNRGSYFSL
                     DPGHVNVLAPGKRTLHTLMPALARRAGRPWLVFGTMGADGQLQTQVQLLARLVDDGAD
                     PAVALAAPRWVVDPGDFSVAIENRFPVDVLDGLRRRGHRLVPVGPFDDVMGHAHVIRI
                     DGDGLTAASDPRCEGLAAGL"
     gene            1154..1372
                     /locus_tag="VKX24_07800"
     CDS             1154..1372
                     /locus_tag="VKX24_07800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08427.1"
                     /translation="MKLFRPKTLALFGIGFLAGSRAGHGPWEKAQAGMDQMKQKFSGS
                     MGSGSGSSTSSNGVDGHWSKKDPQLTEM"
     gene            1445..1855
                     /locus_tag="VKX24_07805"
     CDS             1445..1855
                     /locus_tag="VKX24_07805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020576145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HLJ08428.1"
                     /translation="MDADTARDFIRKNHHAVLATYRADGSPQMSPVAADVDPDGMVVV
                     STRETAMKTKNLRRDPRASLCVLSDGFYGQWVLVDGRAVVVSLPEAMDGLVEYYRRVA
                     GEHPDWDDYRAAMERERRVLLRISVDRVGPNQSG"
     gene            1874..2326
                     /locus_tag="VKX24_07810"
     CDS             1874..2326
                     /locus_tag="VKX24_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018637426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HLJ08429.1"
                     /translation="MLAERLREDLTAAMKRRDELATSALRMALAAVKEAAVSGKEARE
                     LDDDEILQVLAKQVKRREESAEAFRNAGRTDRADRELAERDVLAVYLPAALSPGELEA
                     IVDEVLSEGGFSGMAAMGPAMKAVTARVAGRADGKTVSTLVRERLGAG"
BASE COUNT          333 a          906 c          878 g          303 t
ORIGIN      
        1 ccgtgtacgg cggggcgggg ccgggcgtcc gcctccggca gccggacctg gcccgaacgc
       61 tgaaaaccgt ggccgccgag gggcccgacg ccttctaccg gggcgccgtc ggcgccgagg
      121 ccgccgccca cgtccgacgg atcggcggac tcctcgaccg gagcgacctc gccgcccacc
      181 ggggcgagtg ggtcgagccg ctggagggcc gctaccgcga cctgacggtg gccgagctgc
      241 cgcccaacag ccagggttcg gccgccctgc tcgccctcca cgtgctcgac cgggccggcc
      301 cgctgccgcc cgacggcccc gagcgccagc accgcctcat cgaggcggtg gcgaccgccc
      361 tcgccgagcg cgacgcccac ctcaccgatc cggcccacat gcggctcccg cccgccgtcc
      421 tcgccgaccc ggcccgagcc gagcagatcg ccgccggcgg cgaccccgtc ggctcggtcg
      481 gccgggtcgg cggagcggcc cggggcgccg ggggcgacac cgcctacctc tgcgccgtcg
      541 acgcctcggg gctgtgcgtc agcctcatcc agtccaacta caacgggttc ggttccggtg
      601 tcaccgtccc cggcctcggg atcaacctcc acaaccgggg gtcgtatttc agcctcgacc
      661 ccgggcacgt caacgtcctc gcccccggca aacggacgct gcacaccctg atgcccgccc
      721 tggcccgccg ggcgggacgg ccgtggctgg tcttcggcac catgggcgcc gacggccagc
      781 tccagacgca ggtccagctc ctcgcccgcc tcgtcgacga cggtgccgat cccgccgtgg
      841 ccctcgccgc cccccggtgg gtcgtcgacc ccggggactt ctccgtcgcc atcgagaacc
      901 ggttcccggt cgacgtcctc gacgggctgc gccgccgggg tcaccgcctc gtccccgtcg
      961 gccccttcga cgatgtcatg ggccacgccc acgtcatccg gatcgacggg gacgggctga
     1021 cggcggcgtc cgacccccgc tgcgaagggc tcgccgccgg cctctgacga ccgcccgccg
     1081 gcggtttgcc gccgagcggc ggggggaagg tttcgctgac agagactgac agggatgccg
     1141 cgaaggagac gccatgaagc tgtttcgccc gaagacgctg gctctgttcg gtatcggctt
     1201 cctggccggt tcacgggccg gacacgggcc gtgggaaaag gcgcaggccg gcatggacca
     1261 gatgaagcag aagttctccg ggtccatggg cagcggctcc ggatcctcga cgtcgtcgaa
     1321 tggggtcgac ggccactgga gcaagaagga tccccagctg acggagatgt gacgccgccg
     1381 tcctgagcca cggaaggccc cggggacccc ggggtcttct cgcgtcggag tagcgtcacg
     1441 gctcatggat gccgataccg cccgcgactt catccgcaag aaccaccacg cggtgctcgc
     1501 cacgtaccgg gccgacggca gcccgcagat gtcgccggtc gccgccgacg tcgatcccga
     1561 cggcatggtc gtggtgagca cgcgggagac ggcgatgaag acgaagaacc tccggcgcga
     1621 cccccgggcg tcgctctgcg tcctgagcga cggcttctac gggcaatggg ttctcgtcga
     1681 cgggcgggcg gtggtcgtgt cgcttcccga ggccatggac gggctggtgg agtactaccg
     1741 ccgtgtggcc ggcgagcacc ccgactggga cgactaccgc gccgccatgg agcgggagcg
     1801 gcgggtcctg ctgcggatca gcgtcgaccg ggtcggcccc aaccagagcg gctgaacgac
     1861 gggagccgga ccgatgctgg ccgagcgact gcgcgaggac ctcaccgccg ccatgaagcg
     1921 gcgcgacgag ctcgccacgt ccgcgctgcg catggcgctg gcggcggtga aggaggcggc
     1981 ggtgtcgggc aaggaagccc gcgagctcga cgacgacgag atcctgcagg tcctcgccaa
     2041 gcaggtgaag cggcgggagg agtcggcgga ggccttccgc aacgccggcc ggaccgaccg
     2101 ggccgaccgg gagctggccg agcgcgacgt cctcgccgtc tacctgccgg ccgccctcag
     2161 ccccggggag ctcgaggcga tcgtcgacga ggtcctctcc gagggcggct tctccggcat
     2221 ggcggccatg ggcccggcca tgaaagccgt caccgcccgg gtggccggcc gggccgacgg
     2281 caagacggtg tccacgctcg tccgggagcg gctcggggcc ggctgacccg cctcgacatc
     2341 gaacgtctgt tcgactaggc tcccggccat ggccggggcg tccgaggagg cacgagcgca
     2401 gctgcggtgg cggctggccg
//
LOCUS       DATGJT010000458         2517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1305871, whole genome shotgun sequence.
ACCESSION   DATGJT010000458 DATGJT010000000
VERSION     DATGJT010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305871"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VKX24_07815"
     CDS             complement(<1..617)
                     /locus_tag="VKX24_07815"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLJ08430.1"
                     /translation="MRTSGDPAPPVGAEDNDAATATVVITGVSGFLGQAVLRRLAGSP
                     GVGRLVGLDVREPGYRPRSLQFHLVDVAGSDLRPLFEGVDVLVHLAGVHDAIPDEELM
                     ARVNVGGTRRVLEAAGAAGVGKVVLVSSAAVYGAWPNNPVPLTEDAALRPNPGFLHGV
                     HKAETERLLAEWALARPAVVTTVLRPVFVLGARADHAVARLIRARV"
     gene            689..1897
                     /locus_tag="VKX24_07820"
     CDS             689..1897
                     /locus_tag="VKX24_07820"
                     /inference="COORDINATES: protein motif:HMM:TIGR03624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HLJ08431.1"
                     /translation="MLRFLQSDGPVHWEVARQVARWMALEGEGEPAVPAADRARVAEV
                     APAAEQRVLAETGEPPPSPSVALLGRAEWAEQALQTLRPVLEKLAVTLQGDLPDLAAG
                     AGAGEPGDVPNPFAGLFGMGSPGAPGGPGGELGGNPLAGMAGMFGAIGPLLLGVQCGF
                     MVGQLAQGLLSEHDLLLPVADPPRPALIVPNLEAFHAAWSIPADDLRFYLALGEAVRS
                     RLMARAWVRERLVRLASDYVSSFRIDTAALEAQLGSIDITDPSSFEGAMLDPDAMLGA
                     MQSPEQLAVLERFQLTTAVLETYADVIVERLAEPMLTSLPTIREAMRRHRVERSEADR
                     FIQRLLGLDPSRRLHDQAAAFCKGVIERAGAQALDRLLEAESMLPTPAELEAPGLWLA
                     RIELFGGDTE"
     gene            1894..>2517
                     /locus_tag="VKX24_07825"
     CDS             1894..>2517
                     /locus_tag="VKX24_07825"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF012991.4"
                     /note="catalyzes the formation of
                     3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from
                     phosphoenolpyruvate and D-erythrose 4-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HLJ08432.1"
                     /translation="MIVVMQSEATEADVEGVTEALSRHGLQPSVSRGAECTVIGAIGD
                     VDAVGDLSVFSILPGVDKLVRISAPYKLVSSREGHRRSTIRVGPTLIGGTSFAFIAGP
                     CAVETPEQAAEACEAAAKAGATVLRGDVYKHRTSPYAFQGLGAAGLEILAEQKARFGL
                     PVVAEVLHPQEVDAMVDVVDIFRIGARNMQNFDLLRACSLTGKAVMLK"
BASE COUNT          323 a          943 c          917 g          334 t
ORIGIN      
        1 acccgggccc ggatcagccg ggccacggcg tggtcggccc gggcaccgag cacgaagacc
       61 gggcgcagca cggtggtcac gaccgccgga cgggccagcg cccactcggc cagcagccgc
      121 tcggtctcgg ccttgtggac accgtgcagg aagccggggt tcggccgcag cgcggcgtcc
      181 tccgtgagcg gcaccgggtt gttgggccag gcgccgtaca cggcggcgct ggagaccagc
      241 acgaccttgc ccacgccggc ggcgccggcc gcctccagca cccgccgggt gccgccgacg
      301 ttgacccggg ccatgagctc ctcgtcgggg atggcgtcgt ggaccccggc caggtgcacg
      361 aggacgtcga ccccctcgaa gagcggccgc agatcagagc cggccacgtc gacgaggtgg
      421 aactgcagcg accggggccg gtagcccggc tcccggacgt cgagcccgac cagccggccg
      481 acgccgggcg agccggccag gcggcggagg acggcctggc ccaggaaccc cgacacgccc
      541 gtgatcacca ccgtggcggt ggcggcgtcg ttgtcctcgg cgccaaccgg cggggcgggg
      601 tctcccgaag ttctcacact cctagactgg ccgcatgagc gatccccctc aacctctggg
      661 tcccttcggg gggttcgatc tcacccagat gctccgattc ctccagtcgg acgggcccgt
      721 ccactgggag gtcgcccgcc aggtcgcccg ctggatggcc ctggagggcg agggcgagcc
      781 ggccgtcccc gccgccgacc gggcccgggt ggccgaggtg gcgccggccg ccgagcagcg
      841 ggtcctggcc gagaccggcg agccgccgcc gagcccgtcg gtggccttgc tcggccgggc
      901 ggaatgggcg gagcaggcgc tgcagacgct gcggcccgtc ctcgagaagc tggccgtcac
      961 gctccagggc gaccttcccg acctggccgc cggagccggc gccggcgaac ccggcgacgt
     1021 ccccaatccc ttcgccggcc tgttcggcat ggggagcccc ggggctccgg gagggcccgg
     1081 cggcgagctc ggcggcaatc cactggccgg catggccggg atgttcggcg ccatcgggcc
     1141 gctgctgctc ggtgtgcagt gcggattcat ggtcgggcag ctggcccagg gcctcctctc
     1201 ggagcacgac ctcctgctgc cggtggccga cccgccccgg ccggcgctca tcgtcccgaa
     1261 cctcgaggcc ttccacgccg cctggtcgat cccggccgac gacctccggt tctacctcgc
     1321 cctgggcgag gccgtccgct cccggctgat ggcccgggcc tgggtccggg agcggctcgt
     1381 ccggctggcg tcggactacg tttcgtcgtt ccggatcgac acggccgccc tcgaggccca
     1441 gctcggctcg atcgacatca ccgacccgtc gtccttcgag ggggcgatgc tcgaccccga
     1501 cgccatgctc ggcgccatgc agtcgccgga gcagctggcg gtgctggagc ggttccagct
     1561 gacgacggcg gtgctcgaga cctacgccga cgtcatcgtc gagcggctgg ccgagccgat
     1621 gctgacgtcg ctgccgacca tccgggaggc gatgcgccgc caccgcgtgg agcgcagcga
     1681 ggccgaccgc ttcatccagc ggctcctcgg gctcgacccg agccggcgcc tccacgacca
     1741 ggccgccgcc ttctgcaaag gcgtgatcga gcgagccggc gcccaggccc tcgaccggct
     1801 cctggaggca gaatcgatgc tgcccacccc ggcggagctc gaggcgccgg ggctgtggct
     1861 cgcccgcatc gagctgttcg gaggagacac cgagtgatcg tcgtcatgca gtccgaggcc
     1921 accgaggccg acgtcgaggg ggtgaccgag gcgctgtcgc gccacgggct ccagccgtcg
     1981 gtgtcgcggg gagcggagtg cacggtcatc ggggccatcg gcgacgtcga cgccgtcggc
     2041 gacctctcgg tgttctcgat cctccccggc gtcgacaagc tggtgcggat ctcggcgccg
     2101 tacaagctgg tgtcgtcgcg ggagggccat cgccggtcca cgatccgggt cggcccgacg
     2161 ctcatcggcg gcacgagctt cgccttcatc gccggtccct gcgccgtcga gacgccggag
     2221 caggcggccg aggcctgcga ggcggcggcc aaggccggcg ccaccgtcct gcggggcgac
     2281 gtctacaagc accgcacgtc gccctacgcc ttccagggcc tcggcgccgc cgggctcgag
     2341 atcctggccg agcagaaggc ccgcttcggg ctgccggtgg tggccgaggt gctccatccc
     2401 caggaagtcg acgccatggt cgacgtcgtc gacatcttcc gcatcggcgc ccggaacatg
     2461 cagaacttcg acctgctccg ggcctgctcg ttgaccggca aggccgtcat gctgaag
//
LOCUS       DATGJT010000459         2050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_373785, whole genome shotgun sequence.
ACCESSION   DATGJT010000459 DATGJT010000000
VERSION     DATGJT010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373785"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VKX24_07830"
     CDS             complement(<1..502)
                     /locus_tag="VKX24_07830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08433.1"
                     /translation="MARSRWRLLAGGAAVVVFLSPVVALAHEQRQVGAIQFTVGWQHE
                     PAYAGSQNAVQLFLKDAKGKPIDDLGDPPSLEVQVVTGNQTSDPLTLEPSFDADTGLG
                     THGEFDAPIIPTRPGDYTFHFTGTVNGQKVDEKFTSSDTTFDTVKEPTVAEFPAKDPS
                     AGDLATN"
     gene            complement(970..1704)
                     /locus_tag="VKX24_07835"
     CDS             complement(970..1704)
                     /locus_tag="VKX24_07835"
                     /inference="COORDINATES: protein motif:HMM:TIGR03943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03943 family protein"
                     /protein_id="HLJ08434.1"
                     /translation="MNEEAHAGIVFALGALALRLGLTDAHLAYIRPAMGPVLAVAGAA
                     LAVLGGVVLFAPQHRTAHAGHAVAHDGHGHTGASRVAWLLLAPILAIAIVVPKPLGAF
                     AANRAAATLPMPARADFGPLPPPSAAGGPVDLTLKEFVGRAVYDRGRSLQATPVRLTG
                     FVTPQAGGGGFLLTRFIVTCCAADARPLRVAVRGLAPPWPAADTWLEVTGTWHPQTRT
                     AEDQRPVILDASEFRPIPAPASPYLR"
     gene            complement(1701..>2050)
                     /locus_tag="VKX24_07840"
     CDS             complement(1701..>2050)
                     /locus_tag="VKX24_07840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012919371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="permease"
                     /protein_id="HLJ08435.1"
                     /translation="FLVLGAATAATLQVLVPRSLLDGLGGSGVGAVITLGLLAVVLAV
                     CSEADAFVAASLVQFSATARLAFMVVGPAVDVKLIALQAGTFGRSFAARFAPAAFLVA
                     LASAALVGGLLLR"
BASE COUNT          330 a          624 c          822 g          274 t
ORIGIN      
        1 ggttggtggc cagatccccg gcggacgggt ccttggccgg gaactccgcc accgtcggct
       61 ccttcaccgt gtcgaaggtc gtatccgacg acgtgaactt ctcgtcgacc ttctggccgt
      121 tgaccgtccc ggtgaaatgg aacgtgtagt cgccaggtcg ggtcgggatg atcggggcgt
      181 cgaactcgcc atgggtgccg agcccggtgt ccgcgtcgaa cgacggctcc agcgtcagcg
      241 ggtcgctggt ctggttcccg gtgacgacct ggacctccag actcggcgga tcgcccaggt
      301 cgtcgatcgg cttgcccttg gcgtccttca ggaagagttg gacggcgttc tgcgagccgg
      361 cataggccgg ctcgtgctgc cacccgacgg tgaactggat ggccccgacc tggcgctgct
      421 cgtgagccag ggcgaccacc ggactgagga acacgaccac ggccgcgccg cccgccagca
      481 gcctccaccg ggatcgggcc atgggatctc ctgacggaca ggggcggggc cggcacctca
      541 cctgacgccg tagtcgtcgg ggctcggcgt gacgaagttc ccgggggccg tcgactttgg
      601 gtctatttgg agtcccccca tcgtttccac aatccctccg gcggcgcaaa agcgtcaccg
      661 agggtgaagt cggaacttcg acccgctgta agcgttcggt gaaaggagaa ttcggcgtcg
      721 catcaggggc gaggggcacc gacgagacga catttgggga actctaatga gacgacgttg
      781 ggctttgtcg gcggcgaccg tgctcggcct cgggtgggcc ggggccctcc cggcccttgg
      841 ggcacgcgac gtttcagagc cgccagaagg tggcggtcga ctccgaacag atggtgacca
      901 tgaacgtccc cgaggaacgg ggaccggact ctcacaacac caaggtcgat gtctcggtgg
      961 ttgtaccggt cagcggaggt aggggctcgc cggcgcaggg atgggccgga attcgctggc
     1021 gtcgaggatg acggggcgtt ggtcctcggc cgttcgggtc tggggatgcc aggtgccggt
     1081 gacctcgagc cacgtgtcgg cggcgggcca gggtggggcg aggccccgga cggcgacccg
     1141 gaggggccgg gcgtcagcgg cgcagcaggt gacgatgaag cgggtgagga gaaagccgcc
     1201 gccgccggct tggggggtga cgaatcccgt gaggcggacg ggcgtggcct gcagcgagcg
     1261 acctcggtcg tagaccgccc gtccgacgaa ctccttcagg gtcaggtcga cgggcccgcc
     1321 ggcagctgac ggtggcggaa gcggcccgaa gtcggctcgg gcgggcatgg gaagggtggc
     1381 cgccgcccgg ttggcggcga aggcgccgag aggcttgggg acgacgatgg cgatagccag
     1441 gatcggagcg aggagcagcc acgccacccg ggaggcaccg gtgtggccgt gaccgtcgtg
     1501 ggcgacggca tggccggcgt gagccgtccg gtgctggggg gcgaagagga cgacgccgcc
     1561 gaggacggcg agggcggccc cggcgacggc gaggaccggc cccatggccg ggcggatgta
     1621 ggccaggtgg gcgtcggtca gcccgaggcg gagggcaagg gcgcccaggg cgaagacgat
     1681 gccggcgtgg gcttcttcgt tcatcggagc agcagccctc cgactagtgc ggcggaggcg
     1741 agagcgacga ggaatgcggc gggggcgaac cgagcggcga aggaccggcc gaaggtcccg
     1801 gcttggaggg cgatgagctt cacgtccacc gccgggccga cgaccatgaa cgccagccgg
     1861 gcggtggcgg agaactggac gaggctggcg gccacgaagg cgtcggcttc ggagcacacg
     1921 gcaaggacga cggccagcag gccgagggtg atcacggccc cgacgccaga accgccgagg
     1981 ccgtcgagca gggagcgggg gacgaggacc tggagggtgg cggccgtggc cgcgccgagc
     2041 acgaggaaac
//
LOCUS       DATGJT010000460         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1098996, whole genome shotgun sequence.
ACCESSION   DATGJT010000460 DATGJT010000000
VERSION     DATGJT010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1098996"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VKX24_07845"
     CDS             complement(<1..490)
                     /locus_tag="VKX24_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018839933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08436.1"
                     /translation="MTPAAIRAEGLSKRYGATDALSGLDLEVAPGEVFGYLGPNGAGK
                     TTTIRLLLGLIRATAGRAEIFGVDCQADPVTAHRSVAFVPGDVNLWPSLTGRETLHLL
                     GRVHGRVDAPYRDVLLERFGFDPSKKVRAYSKGNRQKLVLIAALMTRAELLLLDEPTS
                     GLD"
     gene            complement(562..1500)
                     /locus_tag="VKX24_07850"
     CDS             complement(562..1500)
                     /locus_tag="VKX24_07850"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HLJ08437.1"
                     /translation="MALQSGPLFHIGGVQALVRQLLLGGTLVFPAGRFDPAEVLDLME
                     AEGVHRWGGVPTMVSRVLNDPTIEGRDLSTVRAISLGGAPVLPELVARIKARFPNVER
                     GVSQVYGLSEGGGTLTAASGRDLVERPGTAGRPLPVVELRIDRPDEKGTGEVVARTPT
                     QMLGYWGQASDGVIDADGWVHTGDLGHIDAGGYLFITGRLKDLIIRGGENVASTHVED
                     VLLNHPAVREVAVCGRPDPDLGEIVAAAVVVDSDSTVTVAELRDFAAGHLAYFEVPTS
                     WWLRTEPLPANDVGKVRKRDLLAAWPAGAATADDGC"
     gene            complement(1521..2174)
                     /locus_tag="VKX24_07855"
     CDS             complement(1521..2174)
                     /locus_tag="VKX24_07855"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ08438.1"
                     /translation="MRGPVGERFVWGTEIVRREGGIPFLVYEPRRTDAAELLDDVRHW
                     GDRVHLVRGAQRMTYAGLLDIVPRAATVLAGHGVGPGDRVMLLAFNSVEWIVGFWATL
                     AAGAVVVLANPWWSEAEARHALGVVDVALVLTDQRSARLLPEGVPFLGLDDLAARAAA
                     PDRRPLPRPACAGEDEPAVILFTSGTSGPPKGAVLPHRSVIALQHSLLHVTRQLPPR"
     gene            2235..>2505
                     /locus_tag="VKX24_07860"
     CDS             2235..>2505
                     /locus_tag="VKX24_07860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08439.1"
                     /translation="MRRNAGRLLLVLTLVVAGGVDGIARGASALSPGPAATERPALLG
                     PVASSGGLWVPAFDDEFDGDAVDGAKWSNGFGWGDTAANFAAWCDP"
BASE COUNT          337 a          899 c          960 g          309 t
ORIGIN      
        1 ggtcgaggcc gctggtcggc tcgtcgagca gcaacagctc ggcccgggtc atgagggcgg
       61 cgatcaggac gagcttctgg cggttgccct tggagtaggc ccgcaccttc ttcgacgggt
      121 cgaacccgaa gcgttcgagg aggacgtcgc ggtaaggagc gtcgacccgg ccgtggaccc
      181 gcccgagcag gtgcagggtc tcgcggccgg tcagcgacgg ccacaggttg acgtcgcccg
      241 ggacgaaggc caccgagcgg tgggcggtga cgggatcggc ctggcagtcg acaccgaaga
      301 tctccgcccg ccccgccgtg gcccggatga gcccgagcag cagccggatg gtggtcgtct
      361 tgccggcgcc gttgggtccg aggtagccga agacctcgcc cggggccacc tcgagatcga
      421 gcccggacag ggcgtccgtg gccccgtacc gcttcgacag cccttccgct cggatcgccg
      481 ctggcgtcat cgccggccac ctcccggggt gttcctcgga ccgctcagga tatgaaacgc
      541 cggcgccgcg ccggccgacg ctcagcagcc gtcgtcggcg gtggcggcgc cggcgggcca
      601 ggcggcgagg aggtcgcgct tgcggacctt gccgacgtcg ttggccggca gcggctccgt
      661 ccgcagccac caggaggtcg gaacctcgaa gtaggcgagg tggccggcgg cgaagtcccg
      721 cagctcggcc accgtgacgg tgctgtcgga gtcgacgacg acggcggcgg caacgatctc
      781 gccgagatcg gggtcggggc ggccgcagac ggccacctcc cgcaccgccg gatggttgag
      841 cagcacgtcc tcgacgtggg tggaggcgac attctcgccg ccccggatga tgaggtcctt
      901 caaccggccg gtgatgaaga ggtacccgcc ggcgtcgatg tggccgaggt cgcccgtgtg
      961 gacccacccg tccgcatcga tgacgccgtc ggaggcctgg ccccagtagc cgagcatctg
     1021 ggtcggcgtg cgggccacga cttcgccggt gcccttctcg tcgggccggt cgatgcgcag
     1081 ctccaccacc gggagcggcc gcccggcggt gccgggccgc tccacgaggt cccgccccga
     1141 ggcggcggtc agggtgccgc cgccctccga gaggccgtag acctgcgaga cgccccgctc
     1201 gacgttcggg aaacgggcct tgatgcgggc gacgagctcg gggaggacgg gcgccccgcc
     1261 gagggagatg gcccgcaccg tcgagaggtc gcggccctcg atggtcgggt cgttcagcac
     1321 gcggctgacc atcgtcggca cgccgcccca gcggtgcacg ccttccgctt ccatgaggtc
     1381 gaggacctcg gccgggtcga agcggccggc ggggaacacc agcgtcccgc cgaggagcag
     1441 ctggcggacc agcgcctgga ccccgccgat gtggaagagc ggcccgctct ggagcgccac
     1501 ctcccggggc gactcgtcgg tcagcgtggg ggcagctggc gggtcacgtg gagcagcgaa
     1561 tgctgcaggg cgatgaccga ccggtggggg agcaccgcgc ccttcggcgg cccgctcgtg
     1621 cccgacgtga agaggatcac ggccggctcg tcctccccgg cgcaggccgg gcggggcagg
     1681 ggccggcgat cgggcgccgc cgcccgcgcc gccaggtcgt ccaggcccag gaacggcact
     1741 ccctccggca ggagccgggc cgagcgctga tcggtgagga cgagggcgac gtcgacgacg
     1801 cccagggcgt gccgggcctc ggcctcgctc caccaggggt tggccaggac gacgacggcg
     1861 ccggcggcca gcgtggccca gaagcccacg atccactcga cggagttgaa ggccagcagc
     1921 atcacccggt cgccgggccc gacgccgtgg ccggcgagca ccgtcgccgc ccgggggacg
     1981 atgtcgagga gcccggcgta ggtcatccgc tgggcgcccc ggacgaggtg gacccggtcg
     2041 ccccagtggc ggacgtcgtc gaggagctcg gcggcgtcgg tgcggcgggg ctcatagacg
     2101 aggaacggga tgccgccctc ccggcggacg atctccgttc cccagacgaa ccgttcgccg
     2161 accgggcccc gcaccggcgt atctttccct cccccgggcg gcggcaccga accggacggg
     2221 acatgatgac gtcgatgcgc cgaaacgccg gacggctgct cctggtgctg acgctggtcg
     2281 tcgccggagg cgtggacggc atcgccaggg gcgcctcggc actgtccccc ggcccggcgg
     2341 cgacggagcg gcccgccctc ctcggtccgg tcgcctcctc cggcggcctg tgggtgccgg
     2401 ccttcgacga cgagttcgac ggcgacgccg tcgacggcgc caagtggtcc aacggcttcg
     2461 gctggggcga caccgcggcc aacttcgccg cctggtgcga cccgg
//
LOCUS       DATGJT010000461         2080 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1511124, whole genome shotgun sequence.
ACCESSION   DATGJT010000461 DATGJT010000000
VERSION     DATGJT010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2080
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1511124"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VKX24_07865"
     CDS             <1..368
                     /locus_tag="VKX24_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011720952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HLJ08440.1"
                     /translation="NGGPPGDLYVTVHVAPHPLFGRKGNDLTLRVPVTFSEAALGAEV
                     KVPTLDGSVTVKIPPGTAPGKTLRVRGRGMPRAAGGAGDLLVTLDVVVPRTLSDEQRQ
                     AVEALAATEAANPRAHLGV"
     gene            374..799
                     /locus_tag="VKX24_07870"
     CDS             374..799
                     /locus_tag="VKX24_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020550041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLJ08441.1"
                     /translation="MANDERGGVGGRRDDRDRALYVISVAAELAGVHPQTLRIYERKG
                     LVEPQRTVGRSRRYSDRDIHRLQRIQELTNEGVSLAGVKRIIALEEELDAARDEIDRL
                     QDQISDLRRAADEAVADVHRQYRRDLVPFSKAVIRFGPR"
     gene            1059..1871
                     /locus_tag="VKX24_07875"
     CDS             1059..1871
                     /locus_tag="VKX24_07875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08442.1"
                     /translation="MLFGFTSLVVVVVAGAVAFADIPDGNVIEACYQNSTGRLRIVDN
                     SGCANGERKVTWNVRGPQGLRGEPGVAGARGPAGERGPAGPAGPKGLTGPAGAQGLPG
                     AAGPKGDRGPAGPPGTDGLPGQRGPVGADGPAGPQGPAGPDGPPGPPGPAGPVGPRGP
                     AGPAGPQGAQGPRGPVGMSGFEMVTVRMPATGFNSDASKRATALCPSGKRLVGTAGAV
                     DSENGGDLSGRVALYEILPVDGRGARASAAEVGSGTNLRWAVVAVAFCAFVA"
BASE COUNT          267 a          760 c          776 g          277 t
ORIGIN      
        1 gcaacggcgg gccgcccggc gacctctacg tcaccgtcca cgtcgccccc cacccgctct
       61 tcgggcggaa gggcaacgac ctcacgctgc gggtgccggt gacgttctcg gaggcggccc
      121 tcggggccga ggtcaaggtc ccgacgctcg acggctcggt cacggtgaag atcccgccgg
      181 gtacggcgcc gggcaagacc ctgcgggtcc gggggcgggg gatgccgcgg gccgccggcg
      241 gcgccggcga cctgctcgtc accctcgacg tcgtcgtgcc ccggacgctg tccgacgagc
      301 agcggcaggc ggtggaggcc ttggccgcca ccgaagcggc caatccacga gcacacctgg
      361 gggtctgacg gtcatggcga acgacgaacg cggcggtgtc ggcggccggc gggacgaccg
      421 ggaccgggcg ctctacgtga tctcggtggc cgccgagctg gccggtgtcc acccccagac
      481 cctgcgcatc tacgaacgga agggcctggt cgagccccag cggacggtgg gccgctcccg
      541 gcgctactcg gaccgcgaca tccaccggct gcagcggatc caggagttga ccaacgaggg
      601 cgtgagcctg gcgggggtca agcggatcat cgccctggag gaggagctcg acgccgcccg
      661 ggacgagatc gaccggctcc aggaccagat ctcggacctc cggcgagcgg ccgacgaggc
      721 cgtggccgac gtccaccgtc agtaccggcg ggacctcgtc cccttcagca aggccgtcat
      781 ccggttcggc ccgcgctgag cggattgcgc tctattgcca aagcgtaatt ctttcaaata
      841 gggcgggttc ctttccggct tttagagtcg aaagggtacc ccgttggacc tattgctcct
      901 ttgggtctta cgcgagtctc ggctcctcgg tgcgctgccg atccggctcc gcagagtgcg
      961 gagcagggtg agcctgcaaa ggagcgcgca tggccgttcg agaccgcgcc tttgttctcc
     1021 cgaaactgcc tcggcggggc gggagccggc ggatatggat gctgttcggc ttcaccagcc
     1081 tcgtcgttgt cgtcgtcgcg ggggccgtcg ccttcgccga catccccgac ggcaatgtga
     1141 tcgaggcctg ctaccagaac tccaccgggc gtctgcggat cgtcgacaat tccggctgcg
     1201 ccaacggcga acgcaaggtc acctggaacg tgcggggccc gcagggactc cggggcgaac
     1261 ccggtgtggc cggcgcccgc ggccccgccg gtgaacgggg gcccgccggt cccgccggcc
     1321 cgaagggcct gacgggcccg gccggcgccc agggcctccc gggggcggcc ggcccgaagg
     1381 gcgaccgggg ccccgcgggc ccgcccggca ccgacggcct gcccggccag cgcggtccgg
     1441 tgggtgccga cggccccgcc ggcccgcagg gcccggccgg tcccgacggg cctcccgggc
     1501 ctcccggccc ggccggtccg gtcggtcccc ggggcccggc cggcccggcg ggaccccagg
     1561 gtgcccaggg gccccgtggc ccggtcggca tgagcggctt cgagatggtc accgtccgca
     1621 tgccggccac cggcttcaac tccgacgcct ccaagcgggc cacggcgctg tgtccgtcgg
     1681 ggaagcgcct cgtcgggacg gcgggcgccg tcgacagcga gaatggcggc gacctgtcgg
     1741 gccgggtggc gctctacgag atcctgccgg tcgacggccg gggcgcccgg gcgtccgccg
     1801 ccgaggtcgg gtcggggacg aacctccggt gggcggtggt ggccgtggcg ttctgcgcct
     1861 tcgtcgcctg acgagcgacg gccggtgggt gacggccaga gatcacccac cggccggggc
     1921 ggccgtcgta ctctttcgta agtgtcaact gacgctttgc cggtgccggc caacaagggc
     1981 cggaagctcc cgcccgagct gctgaccgcc gacgaggtcc gggcgctcct cgccgcctgc
     2041 tcgaccacgg cgccgaccgg gatccgcaac cgggccctcg
//
LOCUS       DATGJT010000462         2612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_992721, whole genome shotgun sequence.
ACCESSION   DATGJT010000462 DATGJT010000000
VERSION     DATGJT010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_992721"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..246
                     /locus_tag="VKX24_07880"
     CDS             64..246
                     /locus_tag="VKX24_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007471944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HLJ08443.1"
                     /translation="MGGMDANMDEAKGRMKEAAGDIMDDDQMKKEGKADQMGATIKEK
                     AGDMVDKAKDMINKDR"
     gene            306..653
                     /locus_tag="VKX24_07885"
     CDS             306..653
                     /locus_tag="VKX24_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015796998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HLJ08444.1"
                     /translation="MDLGLDVKERNGWAVLSVQGEVDVYTAPQFREQLIQLVDQGQRS
                     ILVDLEGVEFLDSTGLGVLVGGLKRVRSHDGDLALVCTQRRILKVLEITGLTKVFTIY
                     DSVDAAVGGAGQG"
     gene            669..1100
                     /locus_tag="VKX24_07890"
     CDS             669..1100
                     /locus_tag="VKX24_07890"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08445.1"
                     /translation="MDGVVELEIPARPEYVGIARMAVGALAGIRPGLPYERIDDLRIV
                     VSEACTSAIEVLGMEGCLRLRCVDSPKVLEIRIEAPGAAFESVFPDDDEAGPEVDSFR
                     ISLIRALVDDAELRSAGGTTELCLVVHRDGASDEDDGDLPA"
     gene            complement(1104..1856)
                     /locus_tag="VKX24_07895"
     CDS             complement(1104..1856)
                     /locus_tag="VKX24_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017537244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO1664 family protein"
                     /protein_id="HLJ08446.1"
                     /translation="MIEPGGQGALPEQPLPGSTEERELLEGGTVEVLGRMPWSSNATF
                     LVRLRQGARESLAIYKPRKGERPLWDFPRGTLCAREVAAHLVSEALGWGIVPLTILRD
                     GPAGTGMVQRFVDHDPEEHFFTLRDRFGDVFRRFALFDMVINNADRKAGHCLRDGRDH
                     VWGIDHGVSFHRAVKLRTVIWDYEGEPIAPAELAALEGLGARLDGDVGRQLTVLLSGQ
                     ERQATQDRLEWLLAGRVFPHPLTDYPYPWPMV"
     gene            complement(1873..2478)
                     /locus_tag="VKX24_07900"
     CDS             complement(1873..2478)
                     /locus_tag="VKX24_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019633828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3090 family protein"
                     /protein_id="HLJ08447.1"
                     /translation="MPEIEFDPVDSIAAGAVGEPGQRAFYIQAEKDGQVLSVLVEKQQ
                     VAMLAERVRMLLDQVEAQFPGEAETPPVPLTPGAGELRGDPVPLFRALAIGIGFDPSR
                     RLVVLELHERPIADEEDDDEDDEDEDDDPGLEEPGPAEDEGEGYLARLYFTAAQARAM
                     ATRGTAAVEQGRPPCPLCGGPLDPSGHVCPRLNGHGHHDAP"
BASE COUNT          390 a          919 c          951 g          352 t
ORIGIN      
        1 ggagacttcc cgaggggtac ccatctggcg tcccgagacc gcgaacgaac agaggagacg
       61 cacatgggcg gcatggacgc caacatggac gaggccaagg gccggatgaa ggaagccgcc
      121 ggcgacatca tggacgacga ccagatgaag aaggaaggca aggccgacca gatgggcgcc
      181 accatcaagg agaaggccgg cgacatggtc gacaaggcca aggacatgat caacaaggac
      241 cgctagggcg gtccgcacta ggctcgccga gaggctcgac gagcgcgaag aagggaacga
      301 cgcacgtgga tctagggctc gacgtcaagg agcgcaacgg ctgggccgtc ctgtccgtgc
      361 agggcgaggt cgacgtctac accgccccgc agttccgcga gcagctcatc cagctggtcg
      421 accagggtca gcgctcgatc ctggtcgacc tcgaaggcgt ggagttcctc gactcgacgg
      481 ggctcggagt cctcgtcggg ggcctcaagc gcgtccgcag ccacgacggt gatctggcgc
      541 tcgtctgtac acagcgccgg atcctcaagg tgctggagat caccggcctc accaaggtgt
      601 tcacgatcta cgactccgtc gacgccgccg tcggcggcgc cggtcagggc tgagtctccg
      661 gcccgccgat ggacggcgtc gtcgagctgg agatccccgc ccgtccggag tacgtcggta
      721 tcgcccggat ggcggtgggg gcgctggccg gcatccggcc cggcctgccc tacgagcgca
      781 tcgacgacct ccgtatcgtc gtctcggagg cctgcaccag cgccatcgag gtgttgggca
      841 tggagggctg cctccggctg cgatgcgtcg acagcccgaa ggtcctcgag atccgcatcg
      901 aggcgccggg agcggcgttc gagagcgtgt tccccgacga cgacgaagcc ggccccgagg
      961 tcgacagttt ccggatctca ctcatccggg ccctcgtcga cgacgccgag ctgcgctcgg
     1021 ccggcggtac caccgagctg tgcctggtcg tccaccggga cggcgcctcg gacgaggacg
     1081 acggcgacct ccccgcctga ccgtcagacc atcggccagg gataggggta gtcggtcagc
     1141 gggtggggga acacccgccc ggcgagcagc cactccagcc ggtcctgcgt cgcctggcgc
     1201 tcctggcccg acagcagaac ggtgagctgg cggccgacgt cgccgtcgag gcgggcgccg
     1261 agcccctcga gggccgcgag ctccgcgggg gcgatcggtt ccccctcgta gtcccagatg
     1321 accgtgcgca gcttgacggc ccggtggaac gagacgccgt ggtcgatgcc ccagacgtgg
     1381 tcgcggccgt cccgcaggca gtgccccgcc ttgcggtcgg cgttgttgat caccatgtcg
     1441 aagagggcga agcggcggaa cacgtcgccg aagcggtccc gcagcgtgaa gaagtgctcc
     1501 tcggggtcgt ggtcgacgaa gcgctgcacc atgcccgtgc cggccggccc gtcccgcagg
     1561 atcgtgagcg ggacgatccc ccagccgagc gcctccgaca ccaggtgggc ggccacctcc
     1621 cgggcgcaca gcgtgccccg cgggaagtcc cacagcggcc gttcgccttt gcgcggcttg
     1681 tagatcgcca ggctctcccg ggctccctgg cggagccgga cgaggaaggt ggcgttcgac
     1741 gaccacggca tgcgcccgag cacctcgacg gtgccgccct cgagcagctc ccgctcctcc
     1801 gtgctccccg gcaggggctg ttcggggagc gccccctggc ccccgggctc gatcaccgtg
     1861 gcccggcggc ggtcacgggg cgtcgtgatg gccgtgcccg ttcaaccggg gacagacgtg
     1921 gcccgacggg tcgagcggcc cgccgcacag cgggcagggc ggccggccct gctccaccgc
     1981 ggccgtgccc cgggtggcca tcgcccgggc ctgggcggcg gtgaagtaca ggcgggccag
     2041 gtagccctcg ccttcgtcct ccgccggccc gggctcctcg aggccggggt cgtcgtcctc
     2101 gtcctcgtcg tcctcgtcgt cgtcctcctc gtcggcgatc ggccgctcgt gcagttccag
     2161 gacgaccagg cggcgcgacg ggtcgaagcc gatcccgatg gccagcgccc ggaacagcgg
     2221 cacgggatca ccccgcagct cgccggcgcc cggggtcagc gggacgggag gggtctctgc
     2281 ttcaccgggg aactgcgcct ccacctggtc gagcagcatc cgcacccgct cggccagcat
     2341 ggccacctgc tgcttctcga cgaggacgga aaggacctgc ccgtccttct ccgcctggat
     2401 gtagaaggcc cgctggcccg gctcgccgac ggcgccggcg gcgatcgaat cgacgggatc
     2461 gaactcgatc tcaggcaccg gcggcctcgg ccggagcgag ggcggcgccg gggtcggtcg
     2521 tggcgccggc ggcggtgtcg acggcgtccg acttcgggtc gggggggcgg aggtcgtcga
     2581 gcgagccggt gtcgttgagc ttcaccagcg cc
//
LOCUS       DATGJT010000463         4014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_61404, whole genome shotgun sequence.
ACCESSION   DATGJT010000463 DATGJT010000000
VERSION     DATGJT010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4014
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61404"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VKX24_07905"
     CDS             <1..241
                     /locus_tag="VKX24_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012157556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HLJ08448.1"
                     /translation="PSFVMSNSFTNQVIAQLELFTRSEHYPVGVYVLPKHLDEKVARL
                     HLDALGVKLTTLSPDQAAYLGVPVEGPYKSDHYRY"
     gene            complement(248..1444)
                     /locus_tag="VKX24_07910"
     CDS             complement(248..1444)
                     /locus_tag="VKX24_07910"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLJ08449.1"
                     /translation="MAALAHGAVAAGAVGFSTSRTLNHRSSTGEKTPSLTASAPELAG
                     IAAGLAAAGRGVLQVVSDFLDVDEEWAVLRHMAASSGRPLTISVAQIPDRPTDHVAVL
                     DRIAAANAEGLAVSAQVAPRAIGLLLGLSCTLHPFMTNPVFAEIAGEPLGEQVGALRH
                     PEFRRRLLAAHTGRLDRTKLGGFLIDRFGSMYPLGDPPDYEPHPSASLAARAESTGVP
                     AVELALDALLADDGRGLLYLAFANYVDGNLDEARRMLVHPNVVPGLSDGGAHVGTICD
                     GSFPTFLLAHWGLHRPEGRLPVEWLVERQTRATARTLGLTDRGVVARGFKADLNVIDL
                     DRLRLHRPEIHHDLPAGGRRLLQAADGYRHTFVSGVEIMRDGKPTGALPGRLVRSGSA
                     CLGGGR"
     gene            complement(1543..1989)
                     /locus_tag="VKX24_07915"
                     /pseudo
     CDS             complement(1543..1989)
                     /locus_tag="VKX24_07915"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
     gene            2127..2342
                     /locus_tag="VKX24_07920"
     CDS             2127..2342
                     /locus_tag="VKX24_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08450.1"
                     /translation="MNTLFATWHHGGDDLGDRSELDLAGLLARAENRLADVPELEGAR
                     RHVSAALADVVAWAAPPPVVRSTSYAG"
     gene            2428..2721
                     /locus_tag="VKX24_07925"
     CDS             2428..2721
                     /locus_tag="VKX24_07925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08451.1"
                     /translation="MAATTTQSRSNGHRPGARKAVEHALDRHGLPISLPVVGRLRLPA
                     PQHLVWYAGVAVLVALECVEWPIALVLATGKALADNRHSAVLQEFGEALEEVG"
     gene            complement(2718..3113)
                     /locus_tag="VKX24_07930"
     CDS             complement(2718..3113)
                     /locus_tag="VKX24_07930"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HLJ08452.1"
                     /translation="MGTTLFVGEIIGPDILIILAIVMVLFGSAKIPKLARSLGQASHE
                     FRKGLGEGVTDQLLAPPPAPTTPAAVAPPPAPAETVSPVAAEASAAPVEAAKPVEAAR
                     PAEPATAAGAAETAEAARVTPGGNGQATG"
     gene            complement(3176..>4014)
                     /locus_tag="VKX24_07935"
     CDS             complement(3176..>4014)
                     /locus_tag="VKX24_07935"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08453.1"
                     /translation="QAAALARQARAKAEAEAAAEHGRLEQEHRLRLQVESADQTRRDF
                     LAALAHDFRTPVASIEALSSALARRSADLDPDERAEVAQLIEGHARHLAAMVAEVRDL
                     AVSESLSAGGRVDLSDVYMPDLIRASAAAAGLPQDRLVTSIQPGVTVLRTDGEKTLRI
                     LANLLQNAAKHSPADEPVEVHLAQSNGLVEVAVLDRGPGIPPEIASQAFEKAVGFGPH
                     RSSGLGMWIVAQFVESLQGSVWVEPRPGGGMAVRARFPLGVALSLPTALGTHGGLPAS
                     TV"
BASE COUNT          546 a         1444 c         1512 g          512 t
ORIGIN      
        1 ccccagcttc gtcatgtcga actccttcac caaccaggtg atcgcccagc tcgagctgtt
       61 cacccggtcc gagcactacc ccgtcggcgt ctacgtgctg cccaagcacc tcgacgagaa
      121 ggtcgcccgc ctccacctcg acgccctcgg ggtgaagctg acgacgctca gccccgacca
      181 ggccgcctac ctcggcgtgc cggtcgaggg cccctacaag tcagaccact accggtatta
      241 gggagcctta cctgcctccc ccgaggcagg ctgagccgct gcggacgagc cggccgggga
      301 gcgccccggt cggcttgccg tcgcgcatga tctccacgcc ggacacgaac gtgtggcggt
      361 agccgtcggc cgcctgcagc aggcggcggc cgccggcggg gaggtcgtgg tggatctccg
      421 gccggtggag ccgcagacgg tcgaggtcga tgacgttgag gtcggccttg aagccccgcg
      481 ccacgacacc ccggtcggtg aggccgaggg tgcgggcggt ggcccgggtc tggcgctcca
      541 ccagccattc gaccggcagc cgcccctcgg gccggtggag cccccagtgg gccagcagga
      601 aggtcgggaa gctgccgtcg cagatggtgc cgacgtgggc gccgccgtcg gacaggccgg
      661 gaacgacgtt ggggtgcacc agcatgcggc gggcctcgtc gaggttgccg tcgacgtagt
      721 tggcgaaggc caggtacagc aggccccggc cgtcgtcggc cagcagggcg tcgagcgcca
      781 gctccacggc gggaacgccg gtcgactccg cccgggcggc gaggctggcc gacgggtggg
      841 gctcgtagtc gggcgggtcg cccagcgggt acatcgatcc gaagcggtcg atcaggaacc
      901 cgccgagctt ggtgcggtcg agccggccgg tgtgggcggc caggaggcgg cggcggaact
      961 cggggtggcg gagggcgccc acctgctcgc cgagcggctc gccggcgatc tcggcgaaca
     1021 ccgggttggt catgaacggg tgcagcgtgc aggacaggcc gagcagcagc ccgatggccc
     1081 gcggggcgac ctgggcgctg accgccaggc cttcggcgtt ggcggcggcg atgcggtcga
     1141 ggacggcgac gtgatcggtc ggccggtcgg ggatctgggc caccgagatc gtgagcggcc
     1201 gccccgacga ggcggccatg tgccgcagca ccgcccactc ctcgtcgacg tcgaggaaat
     1261 cggagaccac ctggaggacg ccccgaccgg cggcggccaa accggcggcg atgccggcca
     1321 gctcgggcgc cgaggccgtg aggctcggtg tcttctcgcc ggtgctggag cggtggttga
     1381 gcgtgcggga ggtggagaag ccgacggcgc cggcggccac ggcgccgtgc gccagggcgg
     1441 ccatggcggc gatgtcgtcg tcggtggccg gctccccggc acggcccggg gacccatggc
     1501 gtggacccgg agggcgccgt gggggacata ggcggcgcag tcgatgtcgc gccggcggcg
     1561 ctcgagggag tcgagatact cggggaagcc ggtccagtcc cacggcaggc cctcgtggag
     1621 cgccgtgccg gggatgtcct ccacgccctc catgagggcc acgaggcgat cccggtcggc
     1681 ggggcggacg ggagcgaagc cgacgccgca gttgccgaac acgacggtgg tgacgccctg
     1741 agccgaggac gggaacaggt gctcgtccca cgtcgcctgc ccgtcgtagt gggtgtggac
     1801 gtcgacccag ccgggggcga cgagggcgcc ggcggcgtcg atctcctccc ggccccggcc
     1861 ggcgacggtc ccgacctcgc tgaccgttcc gccccgcagg gcgacgtcgg cctcccgcag
     1921 gggggcgccg gtcccgtcgg ccaggagccc gttccggatc acgaggtcgt gctcgccacc
     1981 agaagccatg cctccaacct acgatgtccc gtcccccggc ggtcacggcc aggagggcag
     2041 gtgcccggcg cccgccagcg taagcgtaag gttcataacg gagtttgccc cttgcatcgg
     2101 gccgagaacc gaagcatgct gcggcgatga acactctctt cgccacctgg catcacggcg
     2161 gcgacgacct cggcgaccgg tcggaactcg acctcgccgg gctgctggcc cgggccgaga
     2221 accgcctggc ggacgtcccg gagctcgagg gcgctcgccg gcacgtgagc gccgccctcg
     2281 ccgacgtcgt ggcctgggcc gcgccgccgc cggtcgtccg gtccacctcg tacgccggat
     2341 agccgcccgc cggagcagac gggcgcgctg ctcctagagt tcctgacgcc gcagacgggg
     2401 tagtgaatcg gcgagcaggg aggtcacatg gccgcgacga caacccagag ccgcagcaac
     2461 gggcaccggc ccggagcccg taaggccgtc gagcacgcgc tcgaccggca cggcctgccg
     2521 atctcactcc cggtcgtcgg gcgcctccgg ctgccggcgc cgcaacacct cgtgtggtac
     2581 gccggcgtgg cggtgctagt ggccctggag tgcgtcgaat ggcccatcgc cctggtgctg
     2641 gccaccggca aggcgctggc cgacaaccgc cacagcgcgg tgctgcagga gttcggcgag
     2701 gccctcgagg aagtcggcta gccggtcgcc tgaccgttgc cgcccggcgt cacccgggcc
     2761 gcttcggccg tctcagcggc tcccgccgcc gtcgccggct ctgccggcct ggccgcttcg
     2821 accggcttgg ccgcttccac cggcgcggcg ctggcctcgg cggccaccgg cgagacggtc
     2881 tcggctggcg ccgggggcgg cgcgacggcc gccggcgtcg tgggcgccgg cggcggcgcc
     2941 agcaactgat cggtcactcc ctcgccgagg cccttgcgga actcgtgcga cgcctggccc
     3001 agcgaccggg ccagcttcgg gatcttggca ctgccgaaca gcaccatgac gatggccagg
     3061 atgatcagga tgtccggccc gatgatctca ccgacgaaga gcgttgtccc catggtctgc
     3121 agcgtaaagc cggcaccggg ccttcgacac ggcagttaag cattcctgag ccggctcaga
     3181 cggttgatgc cggaaggccc ccgtgcgtcc ccagggcagt cggcagcgac agcgccacgc
     3241 cgagcgggaa ccgggcccgc accgccatgc ccccgccggg ccggggttcg acccaaaccg
     3301 acccctgcag cgattccacg aactgggcca cgatccacat cccgaggccg gacgatcgat
     3361 gcggcccgaa acccaccgcc ttctcgaagg cctgcgaggc gatctcgggc gggatccccg
     3421 gcccccggtc gaggacggcg acctcgacca ggccgttgga ctgggccagg tgcacctcga
     3481 ccggttcgtc ggcgggcgaa tgcttggcgg cgttctgcag caggttggcc aggatccgca
     3541 gcgtcttctc gccgtcggtc cgcagcaccg tcacgccggg ctggatcgag gtgaccagcc
     3601 ggtcctgggg cagtccggcg gccgccgccg aggcccggat gagatcgggc atgtagacgt
     3661 cggagagatc gacgcgcccg ccggcgctga gcgactcgct caccgccagg tcacgcacct
     3721 ccgccaccat ggccgccagg tgccgggcgt ggccctcgat gagctgggcg acctccgccc
     3781 gctcgtccgg gtcgaggtcg gccgaccgcc gggccagggc gctggagagc gcctcgatcg
     3841 aggccaccgg cgtgcggaag tcgtgggcca gggcggcgag gaagtcccgc cgggtctgat
     3901 cggcgctttc gacctggagg cgcaggcggt gctcctgctc gaggcggccg tgctcggcgg
     3961 cggcctcggc ctcggccttc gcccgcgcct ggcgggcgag ggcggccgcc tggg
//
LOCUS       DATGJT010000464         3430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_578957, whole genome shotgun sequence.
ACCESSION   DATGJT010000464 DATGJT010000000
VERSION     DATGJT010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3430
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578957"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="VKX24_07940"
     CDS             complement(<1..735)
                     /locus_tag="VKX24_07940"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ08454.1"
                     /translation="MCRCRSASTWTATAADFPVRARLSRIVDGLRSRICPSAEVPFAD
                     LPPETAVRLAYQVVLGRDPDPTGLADYGGRLAAGELTPDGMVREMFVAEEFEARHVYP
                     ARFLHVSLHASRRDFVRGLPPARRILDLGGGWKWSAEGALVVMGYPFGFEELVIVDLP
                     SDDRHPLYRSEDHPPLETRLGPVRYDYRSMTDLSGHPDGSYDLIYSGQSIEHVPPAEA
                     DLVLKEAHRVLRPGGTLALDTPNAAVC"
     gene            complement(689..1897)
                     /locus_tag="VKX24_07945"
     CDS             complement(689..1897)
                     /locus_tag="VKX24_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011185483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08455.1"
                     /translation="MAAAVEIENLSKIFRLYREKYTSLKERALHFRRIHYQEFYALEN
                     IDLDIEFGSTVGLLGHNGSGKSTLLKCIAGIIQPTSGLVRTTGRLAALLELGAGFHPD
                     LTGRENVYLNGSILGLKRVEVDRVFDDIVGFAGLEQFIDTPVKFYSSGMYIRLGFAVA
                     INVDPEILLVDEVLSVGDETFQRKCLDKVRTFQEEGRTIVVVSHSADLIRIMCERAAA
                     LHHGVLVSTGEPNDVIRAYRERLMQDAATDADLDPGLARAELSPLWGKVKIEEAEIIY
                     RDPDVAAVRPGEPLRLDVTIDAAEPADDVVMALTIYGPMGGLVFSTNTRVLGVDVGRV
                     HGRRTVSFVIDEVPLLDGAYPVTLGLHTSGGLIYDSWEQQRVFEVKAPGQSIGIVSLP
                     VRVDLDGHGG"
     gene            complement(1899..2762)
                     /locus_tag="VKX24_07950"
     CDS             complement(1899..2762)
                     /locus_tag="VKX24_07950"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08456.1"
                     /translation="MTQIPNSTTRIITAQGSVPRRLREIAHHRELLVNLVRLELKAKY
                     KSSTLGFFWSLLNPAMYLVVFYVAFNVILGAGIPRFAIYLLAGLLVWNFFSAAVTAGT
                     ASIVSGAGLVKKIWFPREILPLASTGAALVHFFLQSLVLVVTLVALRHPVGWLYLTLL
                     PLALLDLILLTSALSVLLAAANVYLRDIQHFVELALLAWFWVTPVVYLYSQLTTHLGG
                     RNIALINPVTPIVLTFQRAFYGLYGHVIKDVGFGWYLRNLVVLAVAVALLFYGAMWVF
                     LRLEGNLAEEL"
     gene            2962..>3430
                     /locus_tag="VKX24_07955"
     CDS             2962..>3430
                     /locus_tag="VKX24_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08457.1"
                     /translation="MRGVGSPPASGAVRAAVIAALAGAAVLAPIRMAQGNPKTRFAAL
                     PAGVPGAGARVAAAVGPPEPGPAGPVVTSAFPMSHLGARWRGSESATVEIRLAGADGA
                     WGPWQPLPADHDLDRGDGGPVLSELIRADDARRAQLRAAGDAQDVELLAIDTEH"
BASE COUNT          556 a         1169 c         1225 g          480 t
ORIGIN      
        1 gcacacggcg gcgttggggg tgtcgagggc cagggtcccg ccggggcgca gcacccggtg
       61 ggcctccttc agcacgaggt cggcttccgc cggggggacg tgctcgatcg actggccgct
      121 gtagatgagg tcgtaggagc cgtcggggtg acccgacagg tcggtcatcg accggtagtc
      181 gtagcggacg ggcccgagcc gcgtctcgag cggagggtgg tcttccgacc ggtagagcgg
      241 gtggcggtcg tcgctcggga ggtcgacgat caccagctcc tcgaagccga aggggtaccc
      301 catcaccacc agcgccccct cggcggacca cttccagcct ccgccgaggt cgaggatccg
      361 ccgggccggc gggaggccgc ggacgaagtc ccgccggctg gcgtgcagcg acacgtggag
      421 gaaccgggcg ggatagacgt ggcgggcctc gaactcctcg gccacgaaca tctcccgcac
      481 catcccgtcg ggcgtgagct cgcccgccgc caggcgcccg ccgtagtcgg ccaggccggt
      541 cgggtcggga tctcgaccga ggacgacctg ataggccagg cggacggccg tctccggtgg
      601 caggtcggcg aagggaacct ccgccgacgg gcagatgcgg ctccggagcc cgtcgacgat
      661 ccggctcagc cgggcccgga ccgggaagtc agccgccgtg gccgtccagg tcgacgcgga
      721 ccggcagcga cacaatccct atggactggc cgggagcctt gacctcgaag acgcgctgct
      781 gctcccagct gtcgtagatc agcccgccgc tggtgtggag cccgagggtc acgggatagg
      841 cgccgtcgag gagcgggacc tcgtcgatga cgaacgagac cgtccgccgg ccgtggaccc
      901 ggccgacgtc gacgcccagc acccgggtgt tggtgctgaa caccaggccg cccatcggac
      961 cgtagatcgt gagggccatg acgacgtcgt cggccggttc ggcggcgtcg atggtgacgt
     1021 cgaggcgcag cggctcgccg ggacggacgg ccgccacgtc gggatcgcgg tagatgatct
     1081 ccgcctcttc gatcttcacc ttgccccaca acggcgacag ctccgcccgg gccaaccccg
     1141 ggtcgaggtc ggcgtcggtg gcggcgtcct gcatgagccg ttcccggtag gcccggatca
     1201 cgtcgttggg ctcaccggtc gacaccaaca cgccgtggtg caacgccgcg gcccgctcgc
     1261 acatgatccg gatgaggtcg gcggagtgcg acacgaccac gatcgtgcgg ccctcctcct
     1321 ggaaggtgcg gaccttgtcg aggcacttgc gctggaaggt ctcgtcgccc accgacagca
     1381 cctcgtcgac gaggaggatc tccgggtcga cgttgatggc cacggcgaag ccgagccgga
     1441 tgtacatccc cgacgagtag aacttcaccg gcgtgtcgat gaactgctcg aggccggcga
     1501 aaccgacgat gtcgtcgaag acgcggtcga cctccacccg cttgagtccg aggatcgagc
     1561 cgttgaggta gacgttctcc cggccggtca ggtcgggatg gaaccccgca ccgagctcca
     1621 gcagagcggc caggcggccg gtggtccgca ccaggccgct ggtcggctgg atgatcccgg
     1681 cgatgcactt gagcagcgtg ctcttgcccg aaccgttgtg gcccagcagg ccgacggtgc
     1741 tgccgaactc gatgtcgaga tcgatgttct cgagggcgta gaactcctgg tagtggatcc
     1801 tccggaaatg gagcgcccgc tccttgagcg aggtgtactt ctcccggtag aggcggaaga
     1861 tcttcgacag gttctcgatc tcgacggcgg cggccatctc agagctcctc ggccaggttg
     1921 ccctcgaggc ggaggaacac ccacatcgcc ccgtagaaca gcagcgccac cgcgacggcc
     1981 agcaccacga ggttccgcag gtaccagccg aacccgacgt ctttgatgac gtggccgtag
     2041 agcccgtaga aggcccgctg gaacgtcagc acgatcggcg tcaccgggtt gatcagggcg
     2101 atgttgcggc cccccaggtg cgtcgtcagc tggctgtaga ggtagacgac cggggtgacc
     2161 cagaaccacg ccagcagcgc cagctccacg aagtgctgga tgtcgcgcag atagacgttg
     2221 gccgcggcca gcagcaccga cagcgccgag gtgagcagga tcagatcgag caacgccagc
     2281 ggcaggagcg tcagatagag ccacccgacc ggatggcgca gcgcgacaag cgtgacgacc
     2341 agcaccaggg actgcaggaa gaagtggacg agtgccgccc ccgtggaggc gagggggagg
     2401 atctcccggg ggaaccagat cttcttcacc aaccccgcgc cgctgacgat cgaggccgtc
     2461 ccggccgtga ccgcggcaga gaagaagttc cacaccagca gaccggccag gaggtaaatg
     2521 gcgaagcgcg ggattccggc gccgaggatc acgttgaagg ccacgtagaa cacgacgagg
     2581 tacatggcgg ggttgagcag cgaccagaag aaccccagcg tgctcgactt gtacttggcc
     2641 ttgagctcca gccgaacgag gttgacgagc aactcccgat ggtgggcgat ctcgcggagc
     2701 cgccggggca cgctgccctg ggcggtgatg atccgggtcg tgctgttcgg gatttgcgtc
     2761 ataaaggaat ggccgggaag ccgtcggcca gactaccgcg gggaccccgc cggcccttgg
     2821 aatgtcctgc tcgccggccg cgagcttttg acccgcttgc ccttttgggg gaggctgctt
     2881 gccacccggc cgggcgttcg ggcttctagg gtgttgcatc atgaatcact cgcgccaccg
     2941 tcgtgacggg acagtgatcg catgagagga gtcggctccc ccccggcctc cggggcggtg
     3001 cgcgccgctg tcatcgccgc gctggccggc gccgccgtcc tcgcccccat ccggatggcc
     3061 cagggcaacc cgaagacccg cttcgccgcc ctgcctgccg gtgtgcccgg cgccggggcc
     3121 cgggtggccg ccgccgtcgg gccgcccgag cccggccccg ccgggccggt ggtcaccagc
     3181 gccttcccca tgtcccacct cggggcccgc tggcgcggga gcgagtcggc gaccgtcgag
     3241 atccgtctgg ccggcgccga cggcgcctgg ggcccatggc agcccctgcc cgccgaccac
     3301 gacctcgacc ggggcgacgg cggccccgtc ctgtcggagc tgatccgggc cgacgacgcc
     3361 cgccgggccc agttgcgagc cgccggcgat gcgcaggacg tcgagctgct ggcgatcgac
     3421 accgagcacg
//
LOCUS       DATGJT010000465         2984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1099356, whole genome shotgun sequence.
ACCESSION   DATGJT010000465 DATGJT010000000
VERSION     DATGJT010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1099356"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1377)
                     /locus_tag="VKX24_07960"
     CDS             complement(<1..1377)
                     /locus_tag="VKX24_07960"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HLJ08458.1"
                     /translation="MQVAVLSNGTEREVTLDLDPEEETVASLAAAVTGSSNGAAGLLV
                     DGRFVDGATPLAEAGLRQGSVIQPAAGPDGMAAPVTTLELRIVGGTDGGKRIPLTPGA
                     HVIGRGDVDIDTGSKTVSPTHARLELSPAGEVVLSDLGSRNGTVVEGYRLRGPLRLEP
                     DQAVQLGAVQLTLAPASQPDRPQLGLPRRGGTVTFNRQPRSAVRPAEKALRLPAAIRE
                     PSGGVRFSWMQVGLPAVFGIGMGILVNPAMMGFALLSPAMAVGNYMQDKKRVKKETAE
                     GKAEAEQTLEQFRRSLVNARRAEIARLRERLPDPAEAVRRATAPSTQLWERRRNHDDF
                     LQLRLGTATVDWTPPLENAPGSFGAAPEPPPDVATALTQLGKLPLAPVGLDLTPGNSL
                     GVVGDRAVVRALLRSLVCQAAVHHGPADLRIAVLTEPDRVTDWDWAKWLPHTASLDEA
                     SGRRMLAST"
     gene            complement(1435..1728)
                     /locus_tag="VKX24_07965"
     CDS             complement(1435..1728)
                     /locus_tag="VKX24_07965"
                     /inference="COORDINATES: protein motif:HMM:NF022280.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion target"
                     /protein_id="HLJ08459.1"
                     /translation="MSGRLTVTSGELRSTAGDMRSTASNISQELQRMMGKVRELTGSW
                     TGQGASAFNGYYEEFNKSWSQCQQALEGVSQLLGRAADAYDEAERNIASQFQR"
     gene            1874..2452
                     /locus_tag="VKX24_07970"
     CDS             1874..2452
                     /locus_tag="VKX24_07970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08460.1"
                     /translation="MPTLEDTVDFKVVTLNDLLDADVRTGVPVAADDKYKRWAFLSTG
                     VAGMLLIALIVALVTGGGSGGGETSKASKEVPAPVNTSPVDITVGGSVPSGITLGGLA
                     SVLSGGQVIASGVTVTQIKEAPALIGKGKSYVVVAAVSNDDVGAVITAKGKRDIALQA
                     GKLPKATPTTTAPAATAPVPIQPAPAATTPSR"
     gene            complement(2459..>2984)
                     /locus_tag="VKX24_07975"
     CDS             complement(2459..>2984)
                     /locus_tag="VKX24_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08461.1"
                     /translation="PRATQGPNGSLAFDAIGPLATGQMYTLKLNAEVETASAPGTITN
                     REVATGMCADAPMRGDAQTTTAVGTGLVPPVRGPAGDVGGGPPGSPAVSSAAQAGSGP
                     GEASSSSSVTRTAAAVAIGRSTGRRAAAGGTSDTARTAGALPRSGADAWPTLALALTL
                     LGSGRALRRVRPRR"
BASE COUNT          428 a         1046 c         1093 g          417 t
ORIGIN      
        1 cgtcgaggcc agcatccgcc gcccggacgc ttcgtcgagg ctggcggtgt ggggaagcca
       61 cttggcccag tcccagtcgg tcacgcggtc cggttccgtg aggacggcga tgcggagatc
      121 ggccgggcca tggtggaccg ccgcctggca gacgaggctg cgcaacagcg cccggacgac
      181 cgcccggtcg ccgaccactc cgaggctgtt gcccggcgtg aggtcgagac cgacgggcgc
      241 cagaggcagc ttgcccagct gggtcaaggc cgtggccaca tccgggggcg gctcgggggc
      301 ggcaccgaac gatccggggg cgttctccag cggaggggtc cagtcgaccg tggccgttcc
      361 gagccggagc tggaggaagt cgtcgtggtt ccggcgccgt tcccagagct gggtgctcgg
      421 ggcggtggcc cggcggacgg cttcggcagg gtcggggagg cgctcccgga ggcgagcgat
      481 ctcggcccgg cgggcgttga ccagcgaccg gcggaactgc tccagcgtct gttcggcctc
      541 ggccttgccc tcggcggttt ccttcttcac ccgcttcttg tcctgcatgt agttcccgac
      601 ggccatggcc gggctaagca gggcgaagcc catcatggcc gggttcacca agatccccat
      661 cccgatcccg aagacagccg ggagaccgac ctgcatccag ctgaagcgga cgcctcccga
      721 tggttcgcgg atggcggccg gaagccggag cgccttctcc gccggccgga cggccgaccg
      781 aggctggcgg ttgaaggtga ccgtgccacc gcggcgaggg agtcccagct gcgggcggtc
      841 cggctgggag gccggcgcca gcgtgagctg gacggcaccg agctggacgg cctgatcggg
      901 ctccagccgc agcgggcccc ggagccggta accctcgacg accgtgccgt tgcgggaacc
      961 gaggtcggac aggacgacct cacccgcagg gctcagctcg agccgggcgt gggtcggaga
     1021 caccgtcttc gagccggtgt cgatgtcgac gtcgccccgg ccgatgacgt gggcgccggg
     1081 ggtcagcggg atacgtttcc cgccgtcggt gccgccgacg atccgcaact cgagcgtggt
     1141 caccggggcg gccatgccgt cgggtccggc ggccggctgg atgaccgatc cctgacggag
     1201 gccggcctcg gccagcggtg tcgccccgtc gacgaaccgg ccgtcgacca gcagaccggc
     1261 tgcgccgttg gaggagccgg tgacggcggc ggcgaggctg gcgaccgtct cctcctcggg
     1321 gtcgagatcg agggtgacct cgcgctccgt gccgttcgac aggacagcga cttgcatggc
     1381 ggcctccccc ggcccagggc ccaggatcgg agctgacccg agcggccgct ccggtcagcg
     1441 ctggaactgc gacgcgatgt tgcgctcggc ctcgtcgtag gcgtcggccg cccgtcccag
     1501 cagctgcgac acgccttcga gagcctgctg gcactgcgac cagctcttgt tgaactcctc
     1561 gtaataaccg ttgaaggcac tggcgccctg gcccgtccag cttccggtga gctcgcgaac
     1621 cttgcccatc atccgttgga gctcctgcga gatgttgctc gccgtactgc gcatgtcccc
     1681 ggcggtgctg cgaagttcgc cggaggtgac ggtgagacga ccgctcatgc cggactcctt
     1741 ctgtcgtggg gcccgatgac cgagcacccg gacggccgga tcgtaccgaa ggaatcgctg
     1801 accagcacgt gtgttttttg cagttcatcg ctacgatgcc ggcaacgggg cgagggccag
     1861 aaggggtgcc gcgatgccga cgctcgaaga caccgtcgac ttcaaagtgg tcacgctcaa
     1921 cgacctgctc gacgccgacg tccgcaccgg cgtccccgtc gccgccgacg acaagtacaa
     1981 gcgctgggcg ttcctctcca ccggggtcgc cgggatgctc ctgatcgccc tgatcgtcgc
     2041 cctcgtgacc ggcggcggca gcggcggtgg cgagacctcc aaggccagca aagaggttcc
     2101 cgcgccagtc aacacgagcc ccgtcgacat cacggtcggc gggtcggttc cgagtgggat
     2161 cactttaggg ggcctggcaa gcgtgctctc cggtggtcag gtcatcgcca gcggagtcac
     2221 cgtcacgcag atcaaggaag ccccggccct tatcggcaag gggaagtcct atgtggtcgt
     2281 cgccgcggtc agcaacgacg acgtgggagc cgtcatcacc gccaagggca agcgggacat
     2341 cgcgctgcag gccggcaaat tgcccaaggc gacaccgacg acaacggccc cggcggcgac
     2401 ggcgcccgtt ccgatccagc cggcgccggc ggcgacgacg ccgtcgcggt aacggccgtc
     2461 agcggcgggg tctcacccgc cggagcgccc gaccggagcc gaggagcgtc agagcgagcg
     2521 ccagggtcgg ccaggcatcg gcaccgctgc gggggagggc gccggccgtt cgagcggtgt
     2581 ccgaagtccc gcccgccgcg gcccggcggc ccgtggaccg gccgatcgcc accgccgccg
     2641 ccgtccgggt caccgacgag gacgacgacg cctcgcccgg gcccgagccg gcctgggcgg
     2701 cagacgaaac agcagggctg ccgggtgggc ccccgccgac gtcaccggcc ggaccccgga
     2761 ccggcgggac caacccggtg ccgaccgcgg tcgtggtctg agcgtcgccc cgcatgggag
     2821 cgtcggcgca cattccggtc gccacctccc ggttcgtgat cgtgccgggc gcggaggccg
     2881 tttcaacctc ggcgttgagc ttcagcgtgt acatctgccc ggtggccaac ggtccgatgg
     2941 cgtcgaacgc cagcgagccg ttggggccct gcgtcgcccg ggga
//
LOCUS       DATGJT010000466         2844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_61653, whole genome shotgun sequence.
ACCESSION   DATGJT010000466 DATGJT010000000
VERSION     DATGJT010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61653"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VKX24_07980"
     CDS             <1..454
                     /locus_tag="VKX24_07980"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HLJ08462.1"
                     /translation="GSGYHRGANASSLDLAERVIAAADCYQAVISDRPHRPAVTRRAA
                     AEELRAMAAAGRLDGEAVERVLAAAGHRRLARPQAAAGLTAREAEVLRLLALGLTTRQ
                     VADRLVISPKTADHHIQHIYTKIGASTRGAAAVFAIEQGILPGEAQLS"
     gene            complement(540..889)
                     /gene="ssrA"
                     /locus_tag="VKX24_07985"
     tmRNA           complement(540..889)
                     /gene="ssrA"
                     /locus_tag="VKX24_07985"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(926..1474)
                     /gene="smpB"
                     /locus_tag="VKX24_07990"
     CDS             complement(926..1474)
                     /gene="smpB"
                     /locus_tag="VKX24_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019548964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HLJ08463.1"
                     /translation="MAAKGPGRRAARPGDGVAERYKQVARNRRARHDYDILEVFECGI
                     ALQGSEVKSLREGRVSLQDAYARIDRGEAWLLGVHIPPYSQATGFGAHDPDRPRKLLL
                     HRTEIDELLGRTQQQSLTLVPLSIYFKEGRAKVELALARGRKLYDKRHAIAARDAERE
                     AAREAARAAGRSTSRGSRREFD"
     gene            1533..1991
                     /locus_tag="VKX24_07995"
     CDS             1533..1991
                     /locus_tag="VKX24_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005149241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HLJ08464.1"
                     /translation="MLRISPKIHAQIVAHCLAGLPDEACGLLAAVPSPVSGAELADHT
                     IERCYPTRNAAASAKLYVVHPQDQLRADRDAEAGGLEIVGVFHSHTHTDAYPSATDVD
                     QAPDPGWHYVIVSLRQAQPSLRSYRIVDGTVSEEPLLTAEQAGPGAPVEY"
     gene            2080..2355
                     /locus_tag="VKX24_08000"
     CDS             2080..2355
                     /locus_tag="VKX24_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013131194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-like small modifier protein 1"
                     /protein_id="HLJ08465.1"
                     /translation="MAVEVRLPTVLRAHAGGRSVVTVEGATIGDVLRTLVAEYPGMAG
                     QVLTDDGGLHRFVNVYLNDDDVRYLEKLDTKVSDGDTISILPAVAGG"
     gene            2366..>2844
                     /locus_tag="VKX24_08005"
     CDS             2366..>2844
                     /locus_tag="VKX24_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013131195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HLJ08466.1"
                     /translation="MAVVRSVLDLIGNTPLVDVSQLSPNPDARILIKLEGQNPGGSVK
                     DRIALSMIEQAEKDGLLEPGAVLLEPSSGNTGIGMALVARVKGYHLKVVLPANVSPER
                     RQLLQVWGAEIIESPGSEGSNGAVRMAQRIAAEHPEWVFLYQYGNHANPRAHYEGTGP
                     "
BASE COUNT          437 a         1024 c          957 g          426 t
ORIGIN      
        1 cggttctggg tatcaccgcg gggccaacgc cagttcgctc gacttggcgg agcgcgtgat
       61 cgccgcggcc gactgctacc aggccgtgat ctcggacagg ccccaccggc cggccgtcac
      121 ccgaagggcg gccgccgaag aactgcgggc gatggccgct gccggccggc tagacggaga
      181 agcagtcgag agggtcctcg ccgctgcggg acaccgccgt ctggcgagac cgcaggccgc
      241 tgccggcttg accgcccgtg aagccgaagt gctgcgtctt ctcgcgctgg gcctcacgac
      301 ccgtcaagtc gccgatcggc tcgtgatctc tccgaagacc gccgatcacc acatccagca
      361 catctacacc aagatcgggg catccacccg cggggcggca gccgtgttcg ccatcgagca
      421 aggaatcctt cccggcgaag cccaactgtc ctgacgaagg gcctcgtcga gggctacgac
      481 cggtacgtgg cgactggcgc acctccaaca acgctcacgg gactgacccc tgagcgctct
      541 tggaggtggc gggaatcgaa cccgcgtcct ccggcttctc atcgggcctt ctccgagcgc
      601 agccggcggc tggatctcgg gacctgcgcc gccaccggcg aactcacagg tccccagccg
      661 acctttggtg tccccggcgg ccggtcggcg gaaccgctcg ggtgagccct actggatgac
      721 gcccgtgacc ggcccgcagg gctgagaccg gacggacggg ctacttgtta agcagccagc
      781 gcgagctgag gctcggcgtt tgtgttgttt cccggctctt taacgtggct ccggggacca
      841 cggctcgctt ctcccgactc gacgaccgaa gtcgaaacca atcaccccca taggttgtcc
      901 agccggcaca ttctaccgga ccggctcagt cgaactccct tcggcttccc ctggacgtgg
      961 accggcctgc ggcccgagcc gcctcccggg cagcctcccg ctcggcatcg cgggcagcga
     1021 tggcatggcg cttgtcgtag agcttgcggc cccgggccag ggccagctcc accttggccc
     1081 ttccctcctt gaagtagatg gacagcggca cgagcgtgag cgactgctgc tgggtcctcc
     1141 cgagcagctc gtcgatctcg gtccggtgga gcaggagctt gcgggggcgg tcggggtcgt
     1201 gggcgccgaa accggtggcc tgcgaatagg gcgggatgtg cacgccgagc agccacgcct
     1261 ccccacggtc gattcgggcg taggcgtcct gcagcgagac acgtccctcg cgcagcgact
     1321 tcacctcgct tccctgcagg gcgatgccgc actcgaagac ctcgaggatg tcgtagtcgt
     1381 ggcgggcccg gcggttacga gccacctgct tgtagcgctc ggcgacgccg tcgcccggcc
     1441 gcgccgcacg tcgacctggt cccttggcgg ccatcggccg agggtaccca tcaaaagggg
     1501 gtacacggag cggcccggta gcctcggcgg ccgtgcttcg gatctcgccc aagatccacg
     1561 cccagatcgt ggcccactgc ctcgccggcc ttcccgacga ggcctgcgga ctgctcgccg
     1621 ccgtcccttc cccagtcagc ggcgccgagc ttgcggacca cacgatcgaa cgctgctacc
     1681 ccacgcgcaa cgcggcggcg tcggccaagc tctacgtcgt ccatccccag gaccagctgc
     1741 gtgccgaccg cgatgccgag gcaggcgggc tcgagatcgt gggcgtcttc cattcccaca
     1801 cccacaccga cgcctatccg tcggcgaccg acgtcgacca ggcgcccgat ccgggctggc
     1861 actacgtgat cgtctcgctc cgccaggccc agccgtcgtt gcgctcctac cggatcgtgg
     1921 acggcaccgt ctccgaggag ccgctgctca ccgccgagca ggcgggcccg ggggcaccgg
     1981 tagaatattg accggatccg tcaacaatca ctggccaccc cggtgaggcc gttcggggct
     2041 tacgcggtgg cggcgcagga accaggaaat ggaggctccg tggccgttga agtccgcttg
     2101 ccgaccgtgc tgcgggccca cgccggcggc cggagcgtgg tgacggtcga aggggcgacc
     2161 atcggcgacg tgctgcgcac cctggttgcc gagtacccgg gcatggccgg ccaggtgctg
     2221 accgacgacg gtggcctgca ccgcttcgtg aacgtgtact tgaacgacga cgacgtgcgc
     2281 tacctggaga agctcgacac caaggtctcg gacggcgaca ccatctcgat cctgccggcc
     2341 gtggccgggg gctgaggcag ctgccgtggc ggtcgtccgc agcgtcctcg acctcatcgg
     2401 caacacgccg ctggtcgacg tcagccagct gagccccaac cccgacgccc gcatcctcat
     2461 caagctcgag gggcagaacc ccggcggctc ggtgaaggat cgcatcgccc tgtcgatgat
     2521 cgagcaggcg gagaaggacg ggctgctcga gccgggcgcc gtgctcctcg agccctcgtc
     2581 gggcaacacc ggcatcggca tggccctcgt ggcccgggtg aagggctacc acctgaaggt
     2641 ggtgctcccg gccaacgtgt cgcccgagcg ccgccagctc ctgcaggtct ggggggcgga
     2701 gattatcgag tcgcccggat cggagggctc gaacggcgcc gtgcgcatgg cccagcggat
     2761 cgcggcggag catcccgagt gggtgttcct ctaccagtac ggcaaccacg ccaacccgcg
     2821 ggcccactac gaggggaccg ggcc
//
LOCUS       DATGJT010000467         3220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1099553, whole genome shotgun sequence.
ACCESSION   DATGJT010000467 DATGJT010000000
VERSION     DATGJT010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1099553"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..994)
                     /locus_tag="VKX24_08010"
     CDS             complement(<1..994)
                     /locus_tag="VKX24_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014669285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HLJ08467.1"
                     /translation="MARPSDAAIEGVDVAAYTIPTDQPESDGTLEWDATTMVLARIHA
                     GGETGLGYTYGSQAVATLIEGKLASVLLGQDPTNIAALWQAMRIQLRNEGYRGESMMA
                     VSALDVALWDLKARLLGVPVVHLLNTAHEAVPIYGSGGFTSYPLERIAEQLGGWAGEG
                     IGRVKMKVGRNQAEDPARLDAARKAIGADVELFVDANGAYSRKQAVEWAERFRSEWDV
                     RWFEEPVSSDDVEGLALVRDRGPGGMDIAAGEYGYELSDFRRWLGAVDCLQADVTRCG
                     GFTGMARVSGLCDAHCLDLSGHCAPALSAHALCAAVHMRHLEYFHDHVRIERLLF"
     gene            complement(997..2814)
                     /locus_tag="VKX24_08015"
     CDS             complement(997..2814)
                     /locus_tag="VKX24_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004003147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HLJ08468.1"
                     /translation="MGLAVTDFVLNRLTQWGIHRVYGFPGDGINGFLGAFDRAGGDPE
                     FIQVRHEEMAAFMACAHAKFTGDIGCCIATSGPGAVHLLNGLYDAKMDHAPVLAIVGQ
                     QKRMSIGAEYQQEIDLNTLFKDVSDFVSTCMSPAQARQLIDRGIRTALSRMGVATVII
                     PADVQEEAAVESPPRMHGAVYTSVGWSRPRIVPHKPDLERAAGVLNEGKKVAMLVGQG
                     AAGATDQIIETAELLGAGVAKALLGRDVIPDDLPFVTGPIGLLGSTASYHMMEHCDTL
                     FMVGTNFPYAEWLPKEGQARGVEIDIAGSRIGDRYPMDVLLVGDARDSLEELIPLLQR
                     KTDRSFREELEKEIEQWWRVVEDRAMQHGDPMNPQRVAFELNKRLPDDVILTADSGSS
                     TNWWARYLKVRKGMRASLSGNLATMGPGTPYAISAKFAHPTRPVIAFVGDGAFQMNGM
                     NELITMKRYWERWTNPTLIICVFNNQDLNQVTWEQRVLAGDPKFPGSQWIPDFPYHRY
                     AELCGFKGIFCDSEDRVGDAWDEALAADRPCVLEVKVDNEIPPMAPHVTKSLAEKSVK
                     AIAAGDPQALGVVEKAVRSKLTEFKEAIPGPRGHSLEGE"
BASE COUNT          506 a         1103 c         1065 g          546 t
ORIGIN      
        1 cgaacaggag ccgctcgatg cggacgtggt catggaagta ctcgagatgg cgcatatgca
       61 cggcggcgca cagcgcgtgt gccgagaggg cgggggcaca gtgccccgac agatcgaggc
      121 agtgcgcgtc gcagaggccg gagaccctgg ccatcccggt gaacccgccg cagcgggtga
      181 cgtctgcctg gaggcagtcg acggcgccca accacctacg gaagtcgctg agctcgtagc
      241 cgtattcccc ggcggcgatg tccatcccgc caggcccccg atcgcggacg agggcgagac
      301 cctccacgtc gtcggaggaa acgggctcct cgaaccagcg cacgtcccat tccgagcgga
      361 atcgttccgc ccactccacc gcctgcttcc gggagtaggc gccgttggca tcgacgaaca
      421 gctccacgtc tgccccgatc gccttgcggg cggcgtcgag ccgggcagga tcctccgctt
      481 ggttgcggcc caccttcatc ttgacccgcc cgatcccttc gccggcccac ccccccagct
      541 gctcggcgat gcgctcgagc ggatagctgg tgaatcctcc gctgccatag atcggcaccg
      601 cttcgtgcgc ggtgttgagg aggtggacga ccgggacccc gagcaggcgc gccttcaggt
      661 cccacagcgc cacgtcgagg gcggagacgg ccatcatcga ctccccgcgg tagccctcgt
      721 tgcggagctg gatccgcatc gcctgccaga gggcggcgat gttggtgggg tcctggccca
      781 ggagcacgct cgccagcttg ccctcgatca gggtggccac tgcttggctt ccgtaggtgt
      841 agccgagccc cgtctctcct ccggcgtgga tccgggcgag gaccatcgtt gtggcatccc
      901 attccaacgt gccatcggac tccggctggt cggtggggat ggtgtacgcc gcgacgtcga
      961 ccccctcgat cgccgcgtcg cttggccgcg ccacgctcat tccccttcga gcgaatggcc
     1021 gcgcgggccg gggatcgcct ccttgaactc ggtcagcttc gagcggaccg ctttctccac
     1081 cacgccgagg gcttgcgggt cccccgcagc aatggccttg acggacttct cggcgagcga
     1141 cttcgtcacg tggggggcca tgggcgggat ctcgttgtca accttgacct ccagcacgca
     1201 cggccggtcc gccgccaacg cctcgtccca ggcgtctccg acccgatcct cggagtcgca
     1261 gaagatccct ttgaatccgc acagctcggc atagcggtga taggggaagt cggggatcca
     1321 ctgggatccg gggaacttcg ggtctcctgc gaggacccgc tgctcccagg tcacctgatt
     1381 gaggtcctgg ttgttgaaca cgcagatgat cagcgtcggg ttcgtccatc gctcccagta
     1441 ccgcttcatg gtgatgagtt cgttcatgcc gttcatttgg aacgccccgt cccccacgaa
     1501 ggcgatgacg ggccgggtcg gatgcgcgaa cttggcgctg atggcatagg gcgtaccggg
     1561 gcccatcgtg gcaaggttgc ccgaaagcga ggcccgcatc cccttgcgca ccttcaggta
     1621 gcgagcccac cagttcgtcg acgaccccga gtccgcggtg aggatgacgt cgtcggggag
     1681 ccgcttgttc aactcgaagg cgacgcgctg gggattcatc gggtcgccgt gctgcatcgc
     1741 ccggtcctcg accacccgcc accattgctc gatctccttc tccagctctt cccggaagga
     1801 gcggtcggtc ttgcgctgca agagagggat cagctcctcc aggctgtccc gagcgtcgcc
     1861 gacgagcagg acgtccatgg gatagcggtc gccgatgcgg gatccggcga tgtcgatctc
     1921 gacgccgcgg gcctggccct ccttgggaag ccattcggca tagggaaagt tggtccccac
     1981 catgaacagc gtgtcgcagt gctccatcat gtggtagctg gcggtcgagc cgagcaggcc
     2041 gatcggcccg gtgacgaagg gcaggtcgtc ggggatgacg tcgcggccca gcaacgcttt
     2101 ggccacgccg gcgccgagca gctccgcggt ttcgatgatc tggtcggtcg cgccggccgc
     2161 cccctggccg acgagcatcg cgaccttctt cccttcattg aggacgcccg ctgcgcgctc
     2221 gaggtccggc ttgtggggaa cgatcctcgg cctggaccat ccgacgctcg tgtagaccgc
     2281 gccgtgcatg cggggcggcg actcgaccgc cgcctcctcc tggacgtcgg cggggatgat
     2341 gaccgtggcc acgcccatcc gggacagggc ggtacggatg ccgcggtcga tcagttggcg
     2401 cgcctgcgcc ggcgacatgc aggtgctgac gaagtcggag acgtccttga agagcgtgtt
     2461 gaggtcgatc tcctgctggt actcggcgcc gatcgacatc cgcttctgct gcccgacgat
     2521 cgccaggacg ggcgcgtggt ccatcttggc gtcgtagagg ccattgagca ggtgcaccgc
     2581 gcccgggccg gaggtggcga tgcagcaacc gatgtcaccg gtgaacttgg cgtgggcgca
     2641 ggccatgaag gccgccatct cctcatggcg aacctggatg aactccggat caccgcccgc
     2701 tcggtcgaag gctcccagaa acccgttgat cccgtcgccc gggaagccgt aaaccctgtg
     2761 aattccccac tgcgtcagcc ggttcagcac gaaatccgtc accgcaaggc ccattggccc
     2821 tcctttccaa tcgatgtcga agcccacgcc cgtcgctccg ttccgcacga gcccgagcgg
     2881 aacccgccca gggaacccct gcctgcggcg cgatcgaaac ggatgtggct ccagtcggtg
     2941 atcgacaggc agttgctcgt cggagaggta gaaggccgga actcggggac ttcgtggacg
     3001 acgaatgcca ttcgctccga caacgccaca tctgtcctca tccctgcctt ctcatcgccg
     3061 gccacaaggg aagccttccc cctgcaggtc gcacggaggg cccggggagg taacagcttt
     3121 gtcacaacgg ccgtcccgcc gggccgggtc cgggagcgcc ggaggctgag gtcggaaccc
     3181 cgtgaccgga gtggtaccga cgtcggccgg cggcgacagc
//
LOCUS       DATGJT010000468         2564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1200264, whole genome shotgun sequence.
ACCESSION   DATGJT010000468 DATGJT010000000
VERSION     DATGJT010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1200264"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..913)
                     /locus_tag="VKX24_08020"
     CDS             complement(<1..913)
                     /locus_tag="VKX24_08020"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ08469.1"
                     /translation="MARSEIEADDSMPLRHDSVGVALRRAAAAAPDGLALVEGQPDPE
                     RRRRWTFTELLADAERMARALATRFEPGEHVAVWASSTPEWVILDRGGAYLNCMPLFH
                     TGGCVLGVLGPIQRLATCVCLREFDPALMLDLCEAERVTHFLAVPTMLVALLAEQARK
                     ERDLSSLRLICSGAAPVPTELVRRVQREFGVEFSILFGQTEAAPVITMTRPDDAPEDI
                     AGTLGTAIPQVAIKVVDPATGDTVPVGQPGELCAKGFMIIRAGENIYPVEIEEVVFRH
                     PGVAEVAVVGLPDETSGEIVAAFIRDAD"
     gene            1113..1748
                     /locus_tag="VKX24_08025"
     CDS             1113..1748
                     /locus_tag="VKX24_08025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08470.1"
                     /translation="MFKSSRRVFGVATAMTLGALIAAPSASAALLGSGSSSGSSSVPA
                     LAGVPLPLSGDLLAPVGSLLGSGGAGGLLGGSSGYLGGVTGLLGAGLLGTGVLGNSGG
                     GLLSGVTGVVGGTGLLGGAGGVTGVTGVLGGVTGVLGGGGLLGGGAGVGAADSAGGDL
                     LDGVFQSVGGTTLACDAAVPQVLSTFVGDAAGAVCALNPFDGGLVGLLGVL"
     gene            1856..2428
                     /locus_tag="VKX24_08030"
     CDS             1856..2428
                     /locus_tag="VKX24_08030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08471.1"
                     /translation="MVRLLRRALRLGLLAGVGVGIVKALRGRRAPDPWADSWVSTGAP
                     GGTRPSAAPVPAAPKPPAPATTGSETAATPPAAAPKPPAPADTGSATAATPPAAAPKP
                     PAPVARAAKPRTGPARKSPTGKAAEPPEERLWVPANDGVCPQSHPVKAKLSSKIFHTP
                     ASRNYSRTKADRCYPDEASAQADGLRPAQR"
BASE COUNT          309 a         1020 c          887 g          348 t
ORIGIN      
        1 gatcggcgtc gcggatgaag gcggccacga tctcgcccga cgtctcgtcg ggcagcccca
       61 ccaccgccac ctcggccaca cccggatggc ggaagacgac ctcctcgatc tcgaccgggt
      121 agatgttctc cccggcccgg atgatcatga accccttggc gcacagctcc cccggctgcc
      181 cgaccgggac cgtgtcgccg gtggccgggt cgacgacctt gatcgccacc tgggggatgg
      241 ccgtgccgag cgtcccggca atgtcctccg gggcgtcgtc gggccgggtc atggtgatga
      301 ccggagcggc ctcggtctgg ccgaagagga tggagaactc cacgccgaac tctcgctgga
      361 cgcgccggac gagctcggtg ggcaccggcg cggcaccgga gcagatcagg cgcagcgagg
      421 agagatcgcg ctccttgcgg gcctgttcgg ccaacagcgc gaccagcatg gtggggacgg
      481 ccaggaagtg cgtgacgcgc tccgcctcgc acaggtcgag catcagggcg gggtcgaact
      541 cccggagaca gacgcaggtg gcgagccgct ggatcggccc caggacgccg aggacgcagc
      601 cgccggtgtg gaagagcggc atgcagttca ggtaggcgcc gccgcggtcg aggatcaccc
      661 actccggcgt gctcgaggcc cacaccgcca cgtgctcgcc cggctcgaag cgggtcgcca
      721 gggcgcgggc catccgctcc gcgtcggcca gcagttcggt gaacgtccag cgccggcggc
      781 gctcgggatc gggctgcccc tccaccagcg ccaggccgtc aggggcggcc gccgccgccc
      841 gccgcagcgc gacaccgacg gaatcgtgcc gcagcggcat cgagtcgtcg gcttcgatct
      901 cgctcctcgc catgattccc cccgagtggc gcagccttcg ccatcggtac attacgagca
      961 cagcgcgcat tcctggcata gctgttgcac cgccgggctc cggcaaaggg tgcagagctg
     1021 acgcggtcga atcggaggac gctgggcaaa ccttccggct ttctcctgtc ccgccccccg
     1081 ggaccgccgg tcctcgtcgc aaggagcttt ccgtgttcaa gtcctcccga cgcgtcttcg
     1141 gcgtcgccac cgccatgacc ctcggagcgc tgatcgccgc tccgtccgcc tccgccgcgc
     1201 tgctcggctc gggcagcagc agcggttctt cgtccgtgcc ggcgctggcc ggcgtccccc
     1261 ttcccctctc cggtgacctt ctcgccccgg tcggcagcct gctcggctcc gggggtgccg
     1321 gcggcctcct cggcggctcc agcggctacc tcggcggcgt caccggcctc ctcggcgccg
     1381 gcctcctcgg cacgggcgtc ctcggcaact ccggcggcgg tctcctcagc ggggtgaccg
     1441 gcgtcgtggg tggcaccggc ctcctcgggg gcgccggcgg cgtcaccggc gtcaccggcg
     1501 tcctcggcgg cgtcaccggc gtcctcggcg gcggcggcct cctcggcgga ggcgccggcg
     1561 tcggcgcggc cgacagcgcc ggcggcgatc tcctcgacgg cgtgttccag tcggtcggcg
     1621 gcaccacgct ggcctgtgac gccgccgttc cccaggtgct gtcgaccttc gtcggcgacg
     1681 ccgccggggc cgtgtgcgcg ctcaacccgt tcgacggggg cctcgtcggg ctgctcggcg
     1741 tgctctgagt cctcttccga ggtgcaccac tggccagggg gccggcgaca tccgtcgccg
     1801 gccctccggc cgtcccgagc ccgggctggc cggggtctcg tcctagactc cgggaatggt
     1861 ccgactgctg cgcagggccc tccgcctcgg cctcctggcc ggcgtcggcg tgggaatcgt
     1921 gaaggccctc cggggccgcc gggcccccga tccgtgggcc gactcctggg tgtccaccgg
     1981 ggcgccgggc ggcacccgcc cgtcggccgc tcctgttccc gccgccccga agccgccggc
     2041 gcccgccacc acgggctcgg aaacggcggc caccccgccg gccgccgccc cgaagcctcc
     2101 ggccccggcg gacaccggat ccgccaccgc cgccactccg ccggccgccg ccccgaagcc
     2161 gccggcaccg gtcgcccggg cggcgaagcc ccgcaccggc ccggcccgga agtcgcccac
     2221 cggcaaggcc gccgagcccc ccgaggaacg gctctgggtg ccggccaacg acggcgtctg
     2281 cccccagtcg caccccgtca aggccaagct gtcgagcaag atcttccata cgccggccag
     2341 tcggaactac agccgcacca aggccgaccg gtgctatccc gacgaggcgt cggcccaggc
     2401 cgacgggctc cgtccggcac aacgatgacg ggcccgcact tgacggatcg gccgttgtgc
     2461 ctcacgatca acgggatgct gtcactcctc gcgacctccg gactcctcct tacgtagggc
     2521 gggcgccccg ataccggcgc tcgcctgccg cctcctgccc tccc
//
LOCUS       DATGJT010000469         3383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_269975, whole genome shotgun sequence.
ACCESSION   DATGJT010000469 DATGJT010000000
VERSION     DATGJT010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269975"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VKX24_08035"
     CDS             <1..198
                     /locus_tag="VKX24_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08472.1"
                     /translation="EEELHLDSVAERQNSRWARLMPESITGRRIAGEFAASEPPVLVA
                     DPGLEEWNGGGTDRWVSPRRP"
     gene            671..1126
                     /locus_tag="VKX24_08040"
     CDS             671..1126
                     /locus_tag="VKX24_08040"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HLJ08473.1"
                     /translation="MRSTVWTTIDEVSNHEPVMLPPQTVIRAVSEAMARHSIGAVLVG
                     TPNRPLGIVSERDVVTALARGADPDATRAGEIMSYDLVALRPSDAVYDAAIDMLDLGI
                     RHVAVLDEYGTAVGMVSVRDLLRPLVVGALEHRSDERPGVSGVPGAGAR"
     gene            complement(1095..1751)
                     /locus_tag="VKX24_08045"
     CDS             complement(1095..1751)
                     /locus_tag="VKX24_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018957253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08474.1"
                     /translation="MTTKVFLLDDHEIVRRGLRDLLEAEEDLSVVGEASTAEQALGRI
                     PATQPDVAVLDVRLGGETESGIEVCREVRSRHPEVRCIMLTSFADDEALFAAIMAGAS
                     GYVLKQVRGSDLVDAIRRVGRGESLIDPALTGRVLERLRTKPEEDELAGLSDQERRIL
                     DLIAEGYTNRQIAETIFLAEKTVKNYVSNLLAKLGMSRRTEAAAYAARLTERRRQEPH
                     "
     gene            1898..3046
                     /locus_tag="VKX24_08050"
     CDS             1898..3046
                     /locus_tag="VKX24_08050"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HLJ08475.1"
                     /translation="MTEFAGPRALRRLVEAVLSISADLELSSVLQRIIDAAMDLVDAR
                     YGAIGVLDDTKSSLAEFVTAGIDPETYRAIGDLPKGHGILGLLIVDPRPLRLPDLREH
                     PESYGFPPHHPPMRSFLGVPIVVRQEVFGNLYLTDKRSGEVFTDVDEELTVALAGAAA
                     VAIDNARLQARVSELALLEDRERIARDLHDTVIQRLFATGLSLQGTGRLAQRPDVAAR
                     IQDAVEDLDQTVKHIRTVIFALESSGTRGAGVRQRVMALTREASGAIGFLPEVHFTGP
                     VDTLVDDDIAEELLATLREALSNVARHARATRVAVSVDSADEITLRVADNGRGLPADA
                     GSGPGLGLRNMASRAEALGGRFTVRAGDAGGAVVEWAVPRVGRPGHGS"
BASE COUNT          471 a         1232 c         1210 g          470 t
ORIGIN      
        1 gaggaggagt tgcacctcga ctccgtggcc gagcggcaga acagccgctg ggcccggctc
       61 atgcccgagt ccatcaccgg gcgccggatc gccggggagt tcgccgcatc ggagccgccg
      121 gtgctcgtcg ccgacccggg cctcgaggaa tggaatggcg gaggcaccga ccggtgggtc
      181 tcgccgcgga ggccctgagg agcccggcgc ggaacggcga gaaacgggcg gcatggaact
      241 cctgccgatc gtcgaggaga tcctggcgtc gcccgagccg ctgacgctcg tcgacctgtg
      301 gtggctgaag cagggcggcc tcctgaccaa cgccacgccg agcgcggatc ggggactgcg
      361 gtctccgtac ccgcggcgac ccggccggac gatcaaaccc ggggcatccg gacgtcctcg
      421 tcgtcggcga gcgagaggta gccctcgtcc tcctgcgtga agtgcaacgt cgggatggtc
      481 cttcggctgt caaggccggg ccggacgcct cgcttgcggc gccggtcggg actttcggcc
      541 ctaccaggga accgtcccga ggcgcaggct ggtcaccgaa gccccgccgc gccgggcccg
      601 agtcgcctcc ccgctcggtc ccggcggggc ggcggcgcgt tctcggactg cgagggaagg
      661 gacggatccg atgcgctcga cggtctggac gacgatcgac gaagtttcca accatgagcc
      721 ggtgatgctt cccccgcaga cggtcatccg ggcggtcagc gaggcgatgg cccggcactc
      781 catcggcgcg gtgctggtgg gaacgccgaa tcgcccgctc gggatcgtgt cggagcgtga
      841 cgtcgtcacc gccctcgccc gcggcgccga ccccgacgcc acccgggcgg gcgagatcat
      901 gagctacgac ctcgtcgccc tccgccccag cgacgccgtc tacgacgccg ccatcgacat
      961 gctcgacctc ggcatccgcc acgtcgccgt cctcgacgag tacggcaccg ccgtcggaat
     1021 ggtgtcggtc cgcgacctgc tccggcccct ggtcgtcggc gccctggagc accgctcgga
     1081 cgagcggccg ggggtcagtg gggttcctgg cgccggcgct cggtgaggcg agcggcgtag
     1141 gccgcggcct cggtccggcg gctcatgccc agcttggcca ggaggttgga gacgtagttc
     1201 ttcacggtct tctcggccag gaagatcgtc tcggcgatct ggcggttggt gtacccctcg
     1261 gcgatgagat ccaggatgcg gcgctcctgg tcgctcaacc cggcgagctc gtcctcctcc
     1321 ggcttggtcc gcaaccgctc cagcacccgt ccggtgagcg ccgggtcgat gagcgactcg
     1381 ccgcggccga cccggcggat ggcgtccacg aggtcgctgc cccggacctg cttgagcacg
     1441 tagcccgagg ctccggccat gatggcggcg aagagcgcct cgtcgtcggc gaacgacgtc
     1501 agcatgatgc agcgcacctc gggatggcgg gaccgtacct cccggcacac ctcgatcccg
     1561 ctctccgtct cgccccccaa ccggacgtcg aggacggcga cgtcgggctg ggtcgccggg
     1621 atccggccga gcgcctgctc cgccgtcgac gcctccccga cgaccgagag atcctcttcc
     1681 gcctcgagca ggtcgcgcag accccgccgc acgatctcgt ggtcgtcgag gagaaacacc
     1741 ttggtggtca tggccccatt ctgacctacc ggaggagtgc gggcaggcca gagcccgtcg
     1801 ggggcgaacg gcccgcggcg gacgggactt cgggctctac ccggcgatgg ggttcagcgt
     1861 cgacagtgga gccgtgccgc tgcctagact ttcgcccgtg accgagttcg ccgggccccg
     1921 ggcgcttcgg cgactcgtcg aggccgtcct gtcgatcagc gccgatctcg agctctccag
     1981 cgtgctccag cggatcatcg acgccgccat ggatctcgtc gacgcccgct acggcgccat
     2041 cggcgtgctg gacgacacga agtcgtcgct ggccgagttc gtcactgcgg gcatcgatcc
     2101 cgagacgtac cgggcgatcg gtgacctgcc caagggccac ggcatcctcg gtctcctgat
     2161 cgtggatccg aggccgctcc gcctcccgga tctgcgggag catcccgaga gctacggctt
     2221 cccccctcat cacccgccca tgcggtcgtt cctcggggtg ccgatcgtgg tgcgccagga
     2281 ggtcttcggg aacctctacc tcaccgacaa gcggagcggg gaggtgttca ccgacgtcga
     2341 cgaggaactc accgtggccc tggccggggc ggcggcggtg gccatcgaca acgcccgcct
     2401 ccaggcccgc gtcagcgagc tcgccctgct ggaggaccgg gagcggatcg cccgggatct
     2461 gcacgacacg gtgatccagc gcctcttcgc caccgggctc tccctgcagg ggacgggccg
     2521 gttggcccag cggcccgacg tggcggcccg gatccaggac gccgtggagg acctcgacca
     2581 aaccgtcaag cacatccgca ccgtgatctt cgccctggag tcctccggca cccggggggc
     2641 cggcgtccgc cagcgcgtca tggccctcac ccgggaggcc agcggtgcca tcgggttcct
     2701 tcccgaggtc cacttcaccg ggcccgtcga cacgctcgtc gacgacgaca tcgccgagga
     2761 gctgctggcg acgctgcgcg aagcgctgtc caacgtcgcc cgccacgccc gtgccacccg
     2821 ggtggcggtg tcggtcgaca gcgcggacga gatcacgctc cgggtcgccg acaacggccg
     2881 gggcctgccg gccgacgccg gctccggccc gggcctcggg ctgcgcaaca tggccagccg
     2941 ggcggaggcg ctcggcgggc ggttcaccgt gcgcgccggc gacgccggcg gtgccgtggt
     3001 cgaatgggcc gtcccccgcg tcgggcgccc cggccacggt tcctgacccg gcaaggagga
     3061 cgccgtgtcc gagatccgca ccgcgacatc cacatggcgg tgggcgaggg tggcctccag
     3121 cagcggaaac aagccggggt gccgggccgc ctccaaccgg atcgacacac tgaccgggaa
     3181 gcagctcgtc cgccggctgg aagcggcgct tccggccccg ccctcgcccg gctaggacgc
     3241 cgaccggcgg gcggcgatga cggtcaggcg gacagttcgg gcagcccgta gaggcgggtg
     3301 agcgtgacga ggatcaggtc ggccgagtcg agccgctccg cctcggggtc gccgaagagc
     3361 tcgagctcca gcgggacgag gaa
//
LOCUS       DATGJT010000470         3131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1099955, whole genome shotgun sequence.
ACCESSION   DATGJT010000470 DATGJT010000000
VERSION     DATGJT010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1099955"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..942)
                     /locus_tag="VKX24_08055"
     CDS             complement(<1..942)
                     /locus_tag="VKX24_08055"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007809957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HLJ08476.1"
                     /translation="MSPDGTAGPLTSRQLASGSRPRADALVLFGATGDLAHKKLFPSL
                     YHLAARGVLKGLPIVGVASSDWDDEALRNRARQSVADAGIANVERAALDRLTKALGYV
                     SGNYQDPKTFERLAERLKGCEHPLFYLAIPPSLFDDVASGLANAGLAGGARVVVEKPF
                     GRDLPSARDLNGVLHQYFPEDEIFRIDHYLGKEAVENLMVFRFANTLLEPVWNRRYVA
                     SFQITMAESFGIGSRGRFYEEAGAIRDVVQNHLLQVVTLVAMEPPVGVDANALRDERV
                     KVLKAMDPVDPDHVVRGQYKGYRQEEGVPPDSDVETFA"
     gene            complement(939..1811)
                     /gene="gnd"
                     /locus_tag="VKX24_08060"
     CDS             complement(939..1811)
                     /gene="gnd"
                     /locus_tag="VKX24_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017562928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HLJ08477.1"
                     /translation="MKIGMVGLGRMGGNMAERLRRAGHEVVGYDRDPKIADVKTLAEL
                     VEALPAPRVAWVMVPAGEPTKSTISELGELLSSGDLVVDGGNSNYKESIARSEELAPK
                     GVGFVDCGVSGGIWGLQNGYGLMVGAGDEHFAVLRPILEALAPADGGLVHAGPVGAGH
                     FTKMVHNGIEYGLMQAYAEGYEILAASELGIDVAGAVEAWRHGTVIRSWLLDLLARAL
                     EEDPGLSKLKGFADDSGEGRWTVEEAIRLAVPAPVISSALFARFGSRQEDSPAMKVVA
                     ALRQQFGGHAVHPE"
     gene            complement(1844..>3131)
                     /locus_tag="VKX24_08065"
     CDS             complement(1844..>3131)
                     /locus_tag="VKX24_08065"
                     /inference="COORDINATES: protein motif:HMM:NF013593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08478.1"
                     /translation="VEELSEIVSFLHDPSHFDAAGAKMPRGFLLVGPPGTGKTLLARA
                     VAGEAGVPFYSAAGSDFSEMFVGVGAARVRDLFAKAKKTGGIVFLDEIDSVGRARNGN
                     APGGGANDERESTLNALLVEMDGFAKEANVVVIAATNRPDILDPALTRAGRFDRQVTV
                     APPDRRGRTRLLELYAKDRTMADDVDFVALARRTPGLTGADVCNLVNQAALEAARGKR
                     NVVTNADFDEALATVMMGRARKSAVVTDRDREVTAWHEAGHTVAALVLPDAHDPVQVT
                     IVPRGPAGGVTWMGGDDHSFLTRSQARAQLVVALGGRAAEELLLDGDFTQGASGDLQS
                     ATGLAVQMVTQWGMSDLGLMALDPDRIVFGGIGDKVHAEVDGMLGTALQSARQVLADH
                     RPLFDAVVKELLDEDTVDVDRLKAIWSQVEGTPVAA"
BASE COUNT          427 a         1098 c         1165 g          441 t
ORIGIN      
        1 ggcgaaggtc tcgacgtcgg agtcgggggg gacgccctcc tcctggcggt agcccttgta
       61 ctggccccgc acgacgtggt cggggtcgac ggggtccatg gccttcagca ccttgacgcg
      121 ctcgtcccgc agggcgttgg cgtccacgcc gaccggcggc tccatggcca ccagcgtgac
      181 cacctggagg aggtggttct ggacgacgtc gcggatcgcc cccgcctcct cgtagaaccg
      241 gccccggctg ccgatcccga agctctcggc catggtgatc tggaagctgg ccacgtagcg
      301 gcggttccac accggctcca gcagcgtgtt ggcgaaccgg aacaccatca ggttctcgac
      361 cgcctccttg ccgaggtagt ggtcgatgcg gaagatctcg tcctcgggga agtactggtg
      421 gagcacgccg ttgagatccc gggccgacgg caggtcgcgg ccgaagggct tctccaccac
      481 gacccgggcg ccgcccgcca ggccggcgtt ggccagcccc gaggcgacgt cgtcgaacag
      541 gctcggcggg atggccaggt agaacagagg gtgctcgcag cccttcagcc gctcggccag
      601 gcgctcgaag gtcttcgggt cctggtagtt gccgctgacg tagcccaggg ccttggtcag
      661 ccggtcgagg gcggcccgct ccacgttggc gatgccggcg tccgccaccg actggcgggc
      721 ccggttgcgc agcgcctcgt cgtcccagtc cgacgaggcc acgcccacga tcggcaggcc
      781 cttcaggacg ccgcgggcgg ccaggtggta gagcgagggg aagagcttct tgtgggccag
      841 gtcgccggtg gccccgaaga ggacgagggc gtcggcccgg ggccgggacc ccgacgccag
      901 ctggcgcgac gtcagcggtc cggcggtgcc gtcggggctc attcgggatg taccgcgtgc
      961 ccgccgaact gctggcggag ggcggccacg accttcatgg ccggcgagtc ctcctggcgg
     1021 gagccgaagc gggcgaacag cgccgaggag atcaccgggg ccggcaccgc caggcggatc
     1081 gcctcctcga ccgtccagcg gccctcgccg gagtcgtcgg cgaagccctt gagcttcgag
     1141 agccccggat cctcctccaa tgcccgggcc aggaggtcga ggagccagga gcggatgacg
     1201 gtgccgtggc gccaggcctc caccgccccc gcgacgtcga tgccgagctc cgaggcggcc
     1261 aggatctcgt agccctcggc gtaggcctgc atcaggccgt actcgatgcc gttgtggacc
     1321 atcttggtga agtggccggc accgaccggc ccggcgtgca ccaggccgcc gtcggccggg
     1381 gccagcgcct ccaggatcgg gcggaggacg gcgaagtgct cgtcgccggc gcccaccatg
     1441 aggccgtagc cgttctgcag cccccagatc ccgcccgaca cgccgcagtc gacgaacccg
     1501 acgcccttgg gcgccagctc ctcggagcgg gcgatcgact ccttgtagtt ggagttgccg
     1561 ccgtcgacga cgaggtcccc cgacgacagg agttcaccga gttcgctgat tgtcgacttc
     1621 gtcggttcac cggcgggaac catcacccac gccacgcggg gggccgggag cgcttcgacg
     1681 agctcggcca gcgtcttgac gtcggcgatc ttgggatccc ggtcgtagcc cacgacctcg
     1741 tggccggccc ggcgcagccg ttcggccatg ttcccgccca tccggcccag accaaccatt
     1801 ccgatcttca cggcgaggga ccttaccccc gccgggggga gggctacgcc gcgaccggcg
     1861 tcccctccac ctgggaccag atggccttca gccggtcgac gtcgacggtg tcctcgtcga
     1921 ggagctcctt gacgacggcg tcgaacagcg gccggtggtc ggccagcacc tggcgggccg
     1981 actgcagcgc ggtgcccagc atcccgtcga cctcggcgtg gaccttgtca ccgatcccgc
     2041 cgaagacgat ccggtcgggg tcgagggcca tgaggccgag gtccgacatg ccccactggg
     2101 tgaccatctg cacggccagg ccggtggccg actgcaggtc gcccgaggcg ccctgcgtga
     2161 aatcgccgtc gaggagcagc tcctcggccg cccgtccgcc gagggccacg accagctggg
     2221 cccgggcctg ggagcgggtg aggaaggagt ggtcgtcgcc gcccatccac gtgacgccgc
     2281 ccgccgggcc ccggggcacg atcgtgacct ggaccgggtc gtgggcgtcg gggaggacga
     2341 gcgccgccac ggtgtggccg gcctcgtgcc aggcggtgac ctcgcggtcg cggtcggtga
     2401 cgacggctga cttgcgggcc cggcccatca tcaccgtggc cagcgcctcg tcgaagtcgg
     2461 cattggtgac gacgttgcgc ttgccccggg cggcctcgag ggcggcctgg ttgacgaggt
     2521 tgcagacgtc ggcgccggtg aggccggggg tgcggcgggc cagggcgacg aagtcgacgt
     2581 cgtcggccat cgtccggtcc ttggcgtaca gctcgagcag gcgggtccgg ccccggcggt
     2641 cgggcggcgc cacggtgacc tggcggtcga agcggccggc ccgggtcagg gcggggtcga
     2701 ggatgtcggg ccggttggtg gcggcgatga cgacgacgtt ggcctccttg gcgaagccgt
     2761 ccatctccac cagcagggcg ttgagggtcg actcccgctc gtcgttggcg ccgccgccgg
     2821 gggcgttgcc gttgcgggcc cgtccgacgg agtcgatctc gtcgaggaac acgatgccgc
     2881 cggtcttctt ggccttggcg aagaggtcgc gcacccgggc ggcgcccacg ccgacgaaca
     2941 tctcggagaa gtcggagccg gccgcggagt agaacggcac cccggcctca ccggctacgg
     3001 cccgggccag gagcgtcttg ccggtgcccg gcgggccgac caggaggaag ccgcggggca
     3061 tcttggcgcc ggcggcgtcg aagtgcgacg ggtcgtggag gaagctgacg atctccgaca
     3121 gctcctcgac c
//
LOCUS       DATGJT010000471         4653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_993910, whole genome shotgun sequence.
ACCESSION   DATGJT010000471 DATGJT010000000
VERSION     DATGJT010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4653
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993910"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VKX24_08070"
     CDS             <1..215
                     /locus_tag="VKX24_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012648866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08479.1"
                     /translation="ASVLADHSVNITDVNTRVLGEEDGEPVYAMLLEVTLPRSLDPVA
                     LENRIRAVAKELGVDASLHPADADVL"
     gene            240..743
                     /gene="def"
                     /locus_tag="VKX24_08075"
     CDS             240..743
                     /gene="def"
                     /locus_tag="VKX24_08075"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HLJ08480.1"
                     /translation="MPVRPVVRLPESVLKRVADPVAGIGPEEKALAADLLDTMFASPS
                     CVGVAAPQIGVSLRAFSVDVSGHRKADSCHGPFVLFNPVLVLARHQELAREGCLSVPD
                     FTGNVARATDVVVRGLTPDGTVRVIEANAFEARALLHELDHLDGMLFLDRVGSLSTDV
                     FRRKRYR"
     gene            760..1377
                     /locus_tag="VKX24_08080"
     CDS             760..1377
                     /locus_tag="VKX24_08080"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HLJ08481.1"
                     /translation="MPFPKRLLLDGETVALDLRPHWWFFAGPLFAGIPVIVLLVAALK
                     QNGDVQTVTLWAVAAIALGWAVWLGSRLVSWQLTHFVVTSDRLVFRSGILAKHMRDIP
                     LEKVNDLASSQSLFERMIGAGDLLIESAGERGQEVFSHIPHPDAVQQEIYRQMEANNA
                     RLRGVAVPRQPSVTDQIAALADLRDRGAISPAEYEAKKAQLLDRL"
     gene            1374..2093
                     /locus_tag="VKX24_08085"
     CDS             1374..2093
                     /locus_tag="VKX24_08085"
                     /inference="COORDINATES: protein motif:HMM:NF038402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HLJ08482.1"
                     /translation="MRVISLVPSATETLLALGVAPIACTRFCEQPGIETVGGTKDPDV
                     AGIALLKPDLVVVNDEENRFEDVDRLRRLGLAIHEMSPRSIADVGPAVAALAGAVGAA
                     VPEPFGPEAWRIWLEERRRQRRGEPRRTFVLVWRRPWMTLAGDTYGSSLLQLLGCFNV
                     FTGRGTRYPTVDLAEAAGRKPDLVLLPTEPYPFKDRHAAEVAESFPGAEVAIVDGQDL
                     FWWGIRTPGAVDRLAEVLAGR"
     gene            complement(2079..2531)
                     /locus_tag="VKX24_08090"
     CDS             complement(2079..2531)
                     /locus_tag="VKX24_08090"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HLJ08483.1"
                     /translation="MLYRSSTPGSYFFCRGGGLGWGVPAALGVQLARPDQAVLCIVGD
                     GSVMYSAQALWTAAHEDLPVVVAVVDNRQYGILKMNLTESGSPAARAGRFVAMDLDSP
                     PVDHVGLARSLGVDAHLVEKPAEVTEAARAAFESRRPTLLHLPISAPG"
     gene            3028..3879
                     /locus_tag="VKX24_08095"
     CDS             3028..3879
                     /locus_tag="VKX24_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08484.1"
                     /translation="MERGSVDPGAEHLGEGRHLGQRPGGGHLVAHDQCQPVGRRLGQQ
                     PGQLLEAAGHRRLAEPRPGRDVDVAVLVEDVHGDRDEHRPGRRRRRGQERPPQHRRQL
                     AEVADLVLPLGGRPGQAGQVAGEDRLGQQVAPVLLAGGDDHRRAVGQGVGQVPRPAAE
                     PGDGVEVHEARPAAGLGVAVGHGHHHVLLQAEHVVELGMVGQGVDEGQLRRPRVAEAV
                     DDAFGPKHLEQDIPPVGRCHRPSSSWPSLHRNRGRSGQSHDGPGGTVEAASKPMVVSP
                     ALLRRIR"
     gene            3876..>4653
                     /locus_tag="VKX24_08100"
     CDS             3876..>4653
                     /locus_tag="VKX24_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08485.1"
                     /translation="MTLSLRWRVASAVTSMLAVAALAAPAGGANVSSVSLTDATGDTQ
                     PSSLAQADLTGSTATFKATEIAFTAVTASPEDPRTSPNWANPGTKISWLIRTASAAPG
                     FDYELRYQMINGALAANVFSGSDPANALCAATKVDYSGHTYRASIDPACIGRPTNLTF
                     ATTIAYQNGADTITDGPDNGAYSAVLSRPSLGYWLVGRDGGIFAFGDAPFAGSTGGIH
                     LNQPIVGMAANPAGPGYWFVASDGGVFAFGGAPFFGSTGAI"
BASE COUNT          627 a         1744 c         1645 g          637 t
ORIGIN      
        1 tcgccagcgt cctcgccgac cacagcgtga acatcaccga cgtcaacacc cgcgtcctcg
       61 gcgaggagga cggcgagccg gtctacgcca tgctgctcga ggtgacgctg ccccgcagcc
      121 tcgaccctgt cgccctcgag aaccggatcc gggcggtggc caaggagctc ggcgtcgacg
      181 ccagcctcca cccggccgac gccgacgtcc tctgagcgga gcgccgaggc aaccggccgg
      241 tgcccgtccg ccccgttgtc cgcctgcccg agagcgtgct gaagcgggtg gccgaccccg
      301 tcgccgggat cgggccggaa gagaaggcgc tcgccgccga tctcctcgac acgatgttcg
      361 cctcgccgtc ctgcgtcggg gtggccgccc cccagatcgg cgtctcgctg cgggccttct
      421 ccgtcgacgt cagcggccac aggaaggccg attcctgcca cggccccttc gtcctcttca
      481 atcccgtcct cgtcctcgcc cgccaccagg agctggcccg ggagggctgc ctgtcggtcc
      541 ccgacttcac cggcaacgtc gcccgggcga ccgacgtggt cgtccgcggg ctgacgcccg
      601 acggcaccgt ccgggtgatc gaggccaacg ccttcgaggc ccgggccctg ctccacgagc
      661 tcgaccatct ggacgggatg ctgttcctcg accgcgttgg ctcgctctcg accgatgtgt
      721 tccgtcgcaa gcggtacagg tgagtcgtac gcttgaacca tgccctttcc gaagcggctc
      781 ctgctcgacg gtgagacggt cgccctcgac ctccgcccgc actggtggtt cttcgccggg
      841 ccgctgttcg ccgggatccc ggtcatcgtg ttgctggtgg cggcgctcaa gcagaacggc
      901 gacgtgcaga ccgtgacgct gtgggcggtg gccgccatcg cgttgggctg ggcggtgtgg
      961 ctcggcagcc ggctcgtcag ctggcagctg acgcacttcg tcgtcaccag cgaccggctc
     1021 gtgttccgtt cggggatcct ggccaagcac atgcgcgaca tcccgctgga gaaggtcaac
     1081 gacctcgcct ccagccagtc gctgttcgag cggatgatcg gggccggcga cctgctcatc
     1141 gagtcggcgg gggagcgggg ccaggaggtc ttcagccaca tcccccaccc ggacgccgtg
     1201 cagcaggaga tctaccggca gatggaggcc aacaacgccc gcctgcgcgg cgtcgccgtc
     1261 ccccgccagc cgtcggtgac ggaccagatc gcggcgctgg ccgacctgcg ggaccggggg
     1321 gctatcagcc cggccgagta cgaggccaag aaggcgcagt tgctcgaccg gctgtgagag
     1381 tcatctccct ggtcccgtcg gccaccgaga cgctgctggc gctcggggtg gcgccgatcg
     1441 cctgcacccg cttctgcgag cagcccggca tcgagacggt gggcggcacg aaagatcccg
     1501 acgtggccgg gatcgcattg ctgaagcccg atctcgtcgt cgtcaacgac gaggagaacc
     1561 gcttcgagga cgtcgaccgc ctccgccggc tcgggctggc gatccacgag atgtcgcccc
     1621 ggtcgatcgc cgacgtgggg ccggcggtgg cggccctggc cggcgccgtc ggcgccgcgg
     1681 tgcccgagcc gttcggcccc gaggcgtggc gcatctggct cgaggagcgc cgccggcagc
     1741 ggcgcgggga accgcgccgc accttcgtcc tcgtctggcg ccggccgtgg atgacgttgg
     1801 ccggcgacac gtacggttca tcgctgctcc aattgctcgg ctgtttcaac gtcttcaccg
     1861 gccggggaac ccggtacccg accgtggacc tggccgaggc cgccggccgc aagcccgacc
     1921 tcgtgctgct cccgaccgag ccctacccgt tcaaggaccg gcacgcggcc gaggtcgccg
     1981 agtcgttccc cggcgccgag gtggcgatcg tcgacggcca ggacctgttc tggtggggca
     2041 tccgcacccc cggcgccgtc gaccggctgg cagaggttct agccgggcgc tgagatcggc
     2101 aggtgcagca gcgtcggccg gcgcgactcg aaggccgccc gcgctgcttc ggtcacctcg
     2161 gccggcttct ccaccaggtg ggcgtcgacg cccagggagc gggccaggcc gacgtggtcg
     2221 acgggcgggg agtcgaggtc catggccacg aatcgccccg cccgggccgc cgggctgccc
     2281 gactccgtca ggttcatctt gaggatgccg tactgccggt tgtcgacgac ggcgacgacg
     2341 accggcagat cctcgtgggc cgccgtccac agcgcctggg cggagtacat gaccgacccg
     2401 tcgcccacga tgcagagcac ggcctggtcg ggccgggcca gctgcacccc gagggcggcg
     2461 gggacacccc atccgagccc cccgccccgg cagaagaagt aggagcccgg cgtcgacgac
     2521 cggtacagca tccggacgtg gaaacccgtg gtgatggcct cgtcgacgag ggcgccgccc
     2581 gccgggagcg cgctcagcag ggcgtgggtg gcgggacgcg aaggggtgca tcgggctgtc
     2641 ggcggcccgc tcggcggcca tggcggcgaa gcgctcccaa gctcccgcgg ccgtcgcccg
     2701 ggcccgcccg agcgcggcgt cgaccgcggc gcggtccacc cgggcccgca ccagcgggac
     2761 gagcgcctgc aggctggcgg cgatgtgccc ggcagtgccg aagcgcgtcg gaaggtcccg
     2821 gcccaccagc gtcgggtcgg cggccaggtg gagcagctcg gcgccgggcg gcagcggcga
     2881 cggcggcgtc caggggtaga cgaggaacgc cttggccccg atgacgaaga tccgccggta
     2941 gcgggacagc gtggccgaca cggccgcggc gctgaagccc agcatccccg accacagcgg
     3001 atggtcggtc gggaagtcga ggttggagtg gagcggggct ccgtggaccc gggcgccgag
     3061 cacctcggcg agggccgtca cctcggccag cgccccggcg gcggccacct cgtcgcccac
     3121 gaccagtgcc agcccgtcgg gcgccgcctc ggccagcagc ccggccagct cctcgaggcc
     3181 gccggccacc gccgcctggc tgaaccgcga ccggggcggg acgtcgacgt cgccgtcctc
     3241 gtcgaggacg tccatgggga tcgagacgaa caccggcccg gtcggcggcg tcgccgcggc
     3301 caggaacgcc cgccgcagca ccggcgccag ctcgccgagg tggcggacct cgtgctgcca
     3361 cttggtggcc gcccgggcca ggccggtcag gtcgccggag aggatcggct cggccagcag
     3421 gtggcgccgg tcctgctggc cggcggtgac gaccatcggc gtgcggttgg ccagggcgtt
     3481 ggtcaggttc cccgtcccgc cgccgagccc ggcgacggtg tggaggttca cgaagctcgg
     3541 ccggccgctg gcctgggcgt agccgtcggc catggccacc accacgttct cctgcaggcc
     3601 gagcacgtag tggagctcgg gatggtcggc cagggcgtcg acgaagggca gctccgtcgt
     3661 ccccgggttg ccgaagcagt ggacgacgcc ttcggtccga agcacctcga gcaggacatt
     3721 ccgcccgttg gtcgctgcca tcgcccgtcc tcctcgtggc cgagcctgca ccgtaatcgg
     3781 ggacgaagcg gtcaatcgca cgacggcccg ggaggcaccg tggaggcggc gtcgaaaccc
     3841 atggtcgtgt cgcccgcact gctccggagg atccgatgac actgtccctg cggtggcgcg
     3901 tcgccagcgc cgtcacctcg atgctcgccg ttgcggcgct ggccgcgccg gccggcggcg
     3961 ccaacgtctc ctcggtctcg ctcaccgacg ccaccggtga cacccagccc agctcgctgg
     4021 cgcaggccga cctcaccggc agcacggcca cgttcaaggc gacggagatc gccttcacgg
     4081 ccgtgacggc ctcccccgag gatccccgca cgtcgcccaa ctgggccaat cccggcacga
     4141 agatcagctg gctcatccgc acggcgtcgg cggcgccggg cttcgactac gagctgcgct
     4201 accagatgat caacggcgcc ctggcggcca acgtgttctc cggctccgac ccggccaacg
     4261 ccctgtgcgc cgcgaccaag gtcgactaca gcggccacac ctatcgagcg tcgatcgacc
     4321 cggcctgcat cggccggccc accaacctca ccttcgccac cacgatcgcc taccagaacg
     4381 gtgccgacac gatcaccgac gggcccgaca acggtgccta ctcggcggtg ctctcccggc
     4441 cgtcgctcgg ctactggctc gtcggccggg acggcggcat cttcgccttc ggcgacgctc
     4501 cgttcgccgg ctcgacgggt ggcatccacc tcaaccagcc gatcgtcggc atggccgcca
     4561 accccgccgg ccccggctac tggttcgtgg cctccgacgg cggcgtgttc gccttcggcg
     4621 gcgccccgtt cttcggctcc accggtgcga tcc
//
LOCUS       DATGJT010000472         2347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_62925, whole genome shotgun sequence.
ACCESSION   DATGJT010000472 DATGJT010000000
VERSION     DATGJT010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62925"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2347
                     /locus_tag="VKX24_08105"
     CDS             <1..>2347
                     /locus_tag="VKX24_08105"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08486.1"
                     /translation="AELDRAAAGEFRVVLVLADAGVGKSRLVAQFLADRPDGVAVLAG
                     RAHTFGVTTSFGPWVEAMERYLRPLGAAELAGLGAGVAGDLAGMLPAMASTGAVPPGG
                     AEAPSFRFLQAFGVLLGRLGREGPVVVVLDDVHLADPSSFEALHYLARHLADVPVLVV
                     ATARPAELRARSVGHDVLLGLEDEGFLRRLRLTPLDAAAIGALAGDVLAQPAPPALVD
                     WLAERSRGVALFALGLLQALVDEGADLAAPALRSLPEGLAERVSGRLARLDDRAREMV
                     ELLATVGRSIGAGDLYGLAEVPPAEGERALQALVGQGLIAEEEQGRDLLIDMEHPLMT
                     EIVLRSIGPVRRRSLHRRVARYLHAAGRVGEAAGHFGRCADVGDAEAIASLQEAMRQA
                     ESRQAYREALSILGILVDVIPAGSDQWLEVLDAMSWQAEWVVDHRADTHAVLGIAALR
                     AIDAVVAESPDPYRRATVKFRLSSFLSWGTGELEEAERCCREALRLFGEAGTPAPALV
                     ARNELAWIRGMGGDIGAWAAGVAEVAAAAEESGVAPLAMLAQSGIGYSSAFQGDFDRC
                     EAAFRRALDIARAAGEPHRLTLCLAALAVGLAVGGRPGEAFPLIAEAKAANTAYGDNV
                     LLEWETICRWMAGDYPGALRSAQESVGWNPAGMSRRRALGTAYAALAAVEAGQPVDAR
                     RYLALAAAAYDGIDWFFFRDYCDYALALVDWQAGARDAALPRLDATAAAILSLDARPF
                     AAFPLADLAQLATECRQPDVAARAARELAGIAPGLGRPLYRA"
BASE COUNT          226 a          893 c          918 g          310 t
ORIGIN      
        1 ggccgagctg gaccgggccg ccgccgggga gttccgggtc gtgctggtcc tggccgacgc
       61 cggcgtgggc aagagccggc tggtggccca gttcctggcc gaccggcccg acggcgtggc
      121 ggtcctggcc gggcgggccc acacgttcgg ggtgacgacg tccttcggcc cctgggtcga
      181 ggccatggag cggtacctgc ggccgttggg agcggcggag ctggccggtc tcggcgccgg
      241 ggtggccggc gacctggccg ggatgctgcc ggccatggcc tccaccggtg ccgtcccgcc
      301 cggcggggcc gaggccccga gcttccggtt cctccaggcc ttcggcgttc tcctcgggcg
      361 gctggggcgg gaagggccgg tcgtcgtggt cctcgacgac gtccacctgg ccgacccctc
      421 gtccttcgag gccctccact acctggcccg gcatctggcc gacgtccccg tcctcgtcgt
      481 ggccaccgcc cggccggcgg agctgcgggc ccgctcggtc ggccacgacg tgctcctcgg
      541 gctggaggac gaggggttcc tgcgccggct gcgcctgacg ccgctcgacg ccgcggccat
      601 cggcgccctg gccggcgacg tcctcgccca gcccgcgccg ccggccctgg tcgactggct
      661 ggcggagcgg tcccgggggg tggcgctctt cgccctgggc ctgctccagg cgctggtcga
      721 cgagggcgcc gacctcgccg ccccggcgct gcggtcgctg cccgaggggc tggccgaacg
      781 ggtgagcggc cgcctggccc gcctcgacga ccgggcccgg gagatggtgg agctgctggc
      841 caccgtgggc cggtccatcg gcgccggcga tctctacggg ctggccgagg tgccgccggc
      901 cgagggcgaa cgggcgctcc aggcgctggt cggccagggg ctcatcgccg aggaggagca
      961 gggccgcgac ctcctcatcg acatggagca tccgctgatg acggagatcg tgctgcggtc
     1021 gatcgggccc gtccgccgcc ggtcgctgca ccggcgggtg gcccgttacc tccacgccgc
     1081 cggccgcgtc ggcgaggccg ccggccactt cggccgctgc gccgacgtcg gcgacgccga
     1141 ggccatcgcc tcgctgcagg aggcgatgcg ccaggcggaa tcccgccagg cctaccggga
     1201 ggccctgtcg atcctcggga tcctcgtcga cgtgatcccg gcgggcagcg accagtggct
     1261 cgaggtgctc gatgccatgt cgtggcaggc ggagtgggtg gtcgaccacc gggccgacac
     1321 ccacgccgtt ctcggcatcg ccgccctccg ggccatcgac gccgtggtgg ccgagtcgcc
     1381 cgacccctac cggcgggcga cggtgaagtt ccgcctgtcg agcttcctgt cgtgggggac
     1441 gggcgagctg gaggaggccg aacgctgctg ccgggaggcc ctgcggctct tcggcgaggc
     1501 cggcacgccg gcgccggcgc tggtggcccg caacgagctg gcctggatcc gggggatggg
     1561 cggggacatc ggggcctggg ccgccggtgt ggccgaggtg gccgccgccg ccgaggagtc
     1621 gggcgtggcg ccgctggcca tgctggccca gagcggcatc gggtactcct ccgccttcca
     1681 gggcgacttc gaccgctgcg aggcggcctt ccgccgggcg ctggacatcg cccgggcggc
     1741 cggcgagccc caccgcctca cgctgtgcct ggccgccctg gccgtggggc tggccgtcgg
     1801 cggccggccc ggcgaggcct ttccgctgat cgccgaggcc aaggcggcca acaccgccta
     1861 cggcgacaac gtgctgctgg agtgggagac gatctgccgc tggatggccg gcgactatcc
     1921 cggggcgctg cgcagcgccc aggagtcggt ggggtggaac ccggccggga tgagccggcg
     1981 ccgggcgctc ggcacggcct acgccgccct ggcggcggtg gaggccggcc agccggtcga
     2041 cgcccgccgc tacctcgccc tggcggcggc ggcctacgac ggaatcgact ggttcttctt
     2101 ccgggactac tgcgactacg ccctggccct ggtcgactgg caggccggcg cccgggacgc
     2161 cgcgctgccc cggctcgacg ccacggcggc ggcgatcctc tcgctcgacg cccggccctt
     2221 cgccgccttc ccgctcgccg acctggccca gctggccacg gagtgccgcc agcccgacgt
     2281 cgccgcccgg gccgcccggg agctggccgg catcgccccc ggtctcggcc ggccgctgta
     2341 ccgggcc
//
LOCUS       DATGJT010000473         2692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_789294, whole genome shotgun sequence.
ACCESSION   DATGJT010000473 DATGJT010000000
VERSION     DATGJT010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_789294"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VKX24_08110"
     CDS             complement(<1..336)
                     /locus_tag="VKX24_08110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08487.1"
                     /translation="MAAKNKPHHHSKRSGQSISVKAGNGGNGTGGNGGNGGNGGSAGP
                     VACVVGPCGSVAGSGGAGGAGGPGTGGAGGDAINGGSNTNAPTNSDNGVNGDVTTAGL
                     SQRINTQAGN"
     gene            complement(569..889)
                     /locus_tag="VKX24_08115"
     CDS             complement(569..889)
                     /locus_tag="VKX24_08115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08488.1"
                     /translation="MAAKSKSKNHVHQSIHVKSGNGGNATAGNGGAGGAGGSSGAVAC
                     QVNSAPPAPPAGPGPIFCGSTAGGGGFGGAGGTAVGGAGGAATNAGSNNNIPTNSGNA
                     VSAG"
     gene            complement(1716..2471)
                     /locus_tag="VKX24_08120"
     CDS             complement(1716..2471)
                     /locus_tag="VKX24_08120"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HLJ08489.1"
                     /translation="MNLESAAKVLGVHYQTAYRWVRTGQLPAAKVGSGYELLPEDVER
                     LAEERRAQARRAEAGSPDWVKAQERLYEALAAAQPEPAQLVVDDVLAAGATPLQVCDR
                     LLAPVLRWLDDDDLLLPGQVAAAAEICEEVAGRLAAPPRGRPRGLAVVASPAGEGHRL
                     PSLMATVALRADRWRVHHLGADVPDEDLLSFITEALPDVVVLSLIVTDGRVAEAAARL
                     TAAVDVPVVVGAAGRSLEELLEAVEGAVRAGAG"
BASE COUNT          387 a          973 c          916 g          416 t
ORIGIN      
        1 gttgccggcc tgcgtgttga tgcgctggct cagcccggcg gtggtcacgt cgccgttgac
       61 cccattgtcg ctgttcgtcg gggcgttggt gttgctgccg ccgttgatgg cgtcgccgcc
      121 ggcgccgccg gttccgggcc caccggcgcc accggcgccg ccggagccgg ccacactgcc
      181 gcacgggccg accacgcagg ccaccggccc ggcgctgccg ccgttgccgc cgttgccccc
      241 gttgcctccg gtgccgttcc caccgttgcc ggccttgacg ctgatcgact ggccggagcg
      301 cttcgagtgg tgatgcggct tgttcttcgc ggccatcgcg gcaggcgcgg cgaaggcgac
      361 gaccagcgca gccgtcccca gcaatgctgc gagcctgcga accccagctc gattcatgaa
      421 ccctcctgtt ccgagatttc ctgtggtatt ccggcttggc cgagcctcga agggcgtccc
      481 gccgcttcac tccaagaccg tgccgaagcc aatgaccggg gtgagcggcg agcgcccacc
      541 ccggtcatcg tccgtaccgt ggctttgact agccggccga gacagcgttc ccgctgttgg
      601 tcgggatgtt gttgttgctg ccagcgttcg tcgccgcacc accggcgcca ccaactgccg
      661 tgccgccagc gccgccgaag ccaccgccgc cggcggtcga accgcagaag atcgggccgg
      721 ggccggccgg aggagcgggc ggagcgctgt tgacctggca ggccaccgca ccggagctgc
      781 cgccggcgcc gccagcgcca ccgttgccgg ccgtggcgtt gccgccgttg ccggacttca
      841 cgtggatcga ctggtgaacg tggttcttgg acttcgactt ggcggccatg gccgggacgg
      901 ccccaccgaa gaggagcgcc gtaacgctga gaccagccag agcaagacgg atcttagaag
      961 acaaggtacc ttcctccatt aacgaatgcg accacgtcgt tactttcgct actgggatcg
     1021 cgagcagacc gggccgtcat gatgggctcc atgtgatttc ggcctccccc agcgggccga
     1081 gccggccgcc ccttcgagca ctttcgggcc gacgatcaca tattaacgac tatggcccgg
     1141 tatagcaaga atgtccgaaa gaatttcttt gacatcctgt gggcggtttc gcccgagaca
     1201 aacaatgata aacgcgcagg tcattgagca ccgttgagca cgactatttc gatttccgtc
     1261 ctccgtctgc cgcgctgggt ccggcgattc gaccagtcag cggccctatc ggcgcaggtc
     1321 agaccgttat ggagtccgct ccgggtggca gtgcggggag tcgcgccatc accgggcagc
     1381 cagcgtgtga cgccggcccg gcggtcggcg gccgaggaaa ggcgtaggcg gtgagcccaa
     1441 ttttgaagaa taagggctcg gctcatagct aatcctgatc gggcatccgg agtgtgcaaa
     1501 tggaaaaagg acaggcggcc tcaccaccgg ctggcgcgcc acgatgcggc ccccgaacga
     1561 gctgaccggc ggcgcgcctt ccgtggtcga agaacccctg ctcccccttc ggcgacagtc
     1621 gccccgtccc cacggggcgc cttccgtccc acgctgattc gccggtttgc ccgatttttc
     1681 ctgcttcgga ggggaacaaa ccggttgggc agttttcagc cggctcccgc ccggaccgcc
     1741 ccctcgacgg cctcgagcag ttcctcgaga gatcggccgg cggcgcccac gacgaccggc
     1801 acgtcgacgg cggccgtgag gcgcgccgcc gcttccgcca cgcgtccgtc ggtcacgatg
     1861 agggacagga cgacgacgtc gggaagggcc tcggtgataa agctgagcag gtcctcgtcc
     1921 gggacgtcgg ctccgagatg gtggacccgc caccggtccg cccgcagggc gacggtggcc
     1981 atgaggctcg gcagacggtg cccctcaccc gccgggctcg ccaccactgc cagcccccgg
     2041 ggccgcccgc ggggcggggc ggccagccgc ccggccacct cctcgcagat ctcggcggcg
     2101 gcggcgacct ggccgggcag gagcaggtcg tcgtcgtcga gccagcgcag caccggggcc
     2161 aggaggcggt cacacacctg caggggcgtc gcgccggcgg ccagcacgtc gtcgacgacg
     2221 agctgcgcag gctcgggctg cgccgccgcc agggcctcgt acagccgttc ctgcgccttc
     2281 acccagtccg gggacccggc ctcggcccgg cgggcctgcg cccggcgctc ctcggccagc
     2341 cgctccacgt cctccggcag gagctcgtag cccgagccga ccttggccgc cggcagctgg
     2401 cccgtccgca cccagcggta ggccgtctgg tagtgcacgc cgagcacctt cgccgccgac
     2461 tcgagattca cgccagcccc cgccctctgg gtgtccggtt ccgagccgaa ccggttcgga
     2521 gcctatcccc gggcgcacta ccccgagagg ggcaaacgaa ccgcgattgt gaggctgtcg
     2581 tcggccaggg cggcgagatc ctgccggggc ccaccgatga ggacggggat gccggtttcc
     2641 gtctggaggc gggcctgcag ggcgccggcc gcctcgaggc ccgacgtctc gc
//
LOCUS       DATGJT010000474         2792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_166598, whole genome shotgun sequence.
ACCESSION   DATGJT010000474 DATGJT010000000
VERSION     DATGJT010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166598"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..1256
                     /gene="hutI"
                     /locus_tag="VKX24_08125"
     CDS             54..1256
                     /gene="hutI"
                     /locus_tag="VKX24_08125"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003892542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HLJ08490.1"
                     /translation="MSDGSLLVRGASSVVTCEGRRPFDLGLVERGAVLVRGGKVWWVG
                     PEAELSAELARSGDVEELDAGGGCVLPGFVDAHTHLVFAGDRAAEHESRLRGQRYETG
                     GIMTTVAATRAASTEQLLAETETRARSALASGTTTLEAKSGYGLDTETERRQLEVLAT
                     VAERTPLRIVPTFLGAHLNPEPGYLDLLVEEMLPACAPLAEGCDAFCDLGALTVPEAR
                     KVLEAGVAQGLTPRLHAEELAHTGGALLAADLECASADHLVHATDDDARALAFAGVVA
                     VLLPATSFCLRSAYAPARRLLDRGVTIALATDCNPGTSYTTSMPFVIAVACSELRLSA
                     EEAVRAATAGGAAALRRPDLGRLTVGGAGDLVVLAGETYADLAYHPGMDRIAAVVAGG
                     EIVKGGPS"
     gene            1253..2161
                     /locus_tag="VKX24_08130"
     CDS             1253..2161
                     /locus_tag="VKX24_08130"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase family protein"
                     /protein_id="HLJ08491.1"
                     /translation="MRARDPQWPTAADWLRRGRDDPPAETELAVLGVPLSVTSITQPA
                     GAHETPAAIRRRLAVLSTYHSERDVDVGELAAVDFGDLDLQPSNKEIASATSEVVREA
                     PMAVLLGGDNAVTYPALLGMAGEGLEGWGLVTLDAHHDVRTYEGRPGNGSPVRALIDA
                     GLPGNQVVQVGIAGFANSVAYRRWCDEVGIDVVTAAEVRFGTIEDVLVEAFERLAMSV
                     DHVYVDLDVDVLDSAFAPACPGARPGGLFPGELLAAAFLAGRNPRVRAIDIVEVDASR
                     DIAERTVDVAALCLLNAAAGLHERLR"
     gene            2173..2604
                     /locus_tag="VKX24_08135"
     CDS             2173..2604
                     /locus_tag="VKX24_08135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08492.1"
                     /translation="MGGDNDACADPARPPRTRLDKLGIKDGTRVVVLDPDHLLDGDDD
                     FEAELAARAVRRLPDGPADVVVWPLDEAADLARLPSLIDWIFPAGALWAVWVKGRKEL
                     NENNVREAALDAGLVDVKVASFSGTHSALKLVVPRARRGKR"
     gene            2601..>2792
                     /locus_tag="VKX24_08140"
     CDS             2601..>2792
                     /locus_tag="VKX24_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016435647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HLJ08493.1"
                     /translation="MKLERAYYPADTSSPVLESTVGSALREAAERTPDGAAMVEGVPG
                     PVLDRRRWTNAELLAEAEAV"
BASE COUNT          338 a         1044 c         1056 g          354 t
ORIGIN      
        1 cgggcccggg gcatccgcat gccgatgctc ccgtcgtcga cgccggacgg ccgatgagcg
       61 acggcagcct gctcgtccgg ggggcgtcct ccgtggtgac ctgcgagggc cgccgcccgt
      121 tcgacctcgg gctcgtcgag cggggggcgg tgctcgtccg gggcggcaag gtgtggtggg
      181 tcgggccgga ggcggagctg tcggccgagc tggcccgcag cggcgacgtc gaggagctcg
      241 acgccggcgg cgggtgcgtg ctgcccggct tcgtcgacgc ccacacccac ctcgtgttcg
      301 ccggggaccg ggccgccgaa cacgagtccc ggctgcgggg gcagcgctac gagaccggcg
      361 ggatcatgac cacggtggcg gccacccggg cggcgtcgac ggagcaactc ctggccgaga
      421 cggagacccg ggcccggtcg gcactggcct cggggacgac gacgctggag gccaagtcgg
      481 gctacggcct cgacaccgag accgagcgcc ggcagctgga ggtgctggcc accgtggccg
      541 agcggacgcc gctgcggatc gtgccgacgt tcctcggcgc ccacctgaac cccgagcccg
      601 gctacctcga cctgctggtc gaggagatgc tcccggcctg cgccccgctg gccgagggct
      661 gcgacgcctt ctgcgacctc ggggccctca ccgtccccga ggcccgcaag gtgctcgagg
      721 ccggcgtggc ccagggcctc acgccccggc tccacgccga ggagctggcg cacaccggcg
      781 gcgcgctgct cgccgccgac ctcgagtgcg ccagcgccga ccacctggtc cacgccaccg
      841 acgacgacgc ccgggccctg gccttcgccg gcgtcgtggc cgtgctgctg ccggcgacgt
      901 cgttctgcct ccgatcggcc tacgccccgg cccgccggct cctcgaccgg ggcgtcacga
      961 tcgccctggc caccgactgc aaccccggca cgagctacac cacgtcgatg ccgttcgtca
     1021 tcgccgtggc ctgctccgag ctccggctgt cggccgagga ggcggtgcgg gcggcgacgg
     1081 ccggcggggc ggcggcgctg cggcgcccgg acctcggccg gctgaccgta ggcggcgccg
     1141 gcgacctggt cgtgctggcg ggggagacgt acgccgacct cgcctaccac ccgggcatgg
     1201 accgcatcgc ggcggtggtg gccggcggcg agatcgtgaa gggcggcccc tcgtgagggc
     1261 ccgcgacccg cagtggccga cggcggccga ctggctgcgc cgggggaggg acgacccgcc
     1321 ggccgaaacc gagctggccg tgctcggagt gccgctgtcg gtcacgtcga tcacccagcc
     1381 ggccggagcc cacgagacgc cggcggccat ccggcggcgg ttggcggtgc tgtcgaccta
     1441 ccactccgaa cgcgacgtcg acgtcggcga gctggccgcc gtcgacttcg gcgacctcga
     1501 cctgcagccg tccaacaagg agatcgcctc ggcgacgagc gaggtcgttc gggaggcgcc
     1561 gatggccgtc ctcctcggcg gcgacaacgc cgtcacctac ccggcgctgc tcggcatggc
     1621 cggcgagggc ctggagggct gggggcttgt gacgctcgac gcccaccacg acgtccgcac
     1681 ctacgagggc cgccccggca acgggtcgcc ggtgcgggcg ctgatcgacg ccgggctccc
     1741 cggcaaccag gtcgtgcagg tcggcatcgc cggcttcgcc aactccgtcg cctaccgccg
     1801 gtggtgcgac gaggtcggca tcgacgtcgt gaccgccgcc gaggtccgct tcggcaccat
     1861 cgaggacgtc ctcgtcgagg ccttcgagcg gctggcgatg tcggtcgacc acgtctacgt
     1921 cgacctcgac gtcgacgtcc tcgactcggc cttcgccccg gcctgccccg gcgcccgccc
     1981 cggcgggctc ttccccggcg agctgctggc cgcggccttc ctggccggcc gcaacccccg
     2041 ggtgcgggcg atcgacatcg tcgaggtcga cgccagccgc gacatcgcgg agcggacggt
     2101 cgacgtcgcc gccctctgcc tgctcaacgc cgccgccggc ctccacgagc ggctccgttg
     2161 acgccgtccg gtatgggcgg ggacaacgac gcctgcgccg atcccgcccg tccgccccgg
     2221 acgcggctcg acaagctcgg gatcaaggac ggcacccgcg tcgtcgtcct cgaccccgat
     2281 catcttctgg acggcgacga cgacttcgag gccgagctcg ccgcccgggc cgtgcggcgg
     2341 ctgcccgacg gcccggccga cgtcgtggtc tggccgctcg acgaggcggc cgacctcgcc
     2401 cggctcccgt cgctgatcga ctggatcttt ccggccggcg ccctgtgggc ggtgtgggtg
     2461 aagggccgca aggagctgaa cgagaacaac gtccgggagg cggcgctcga cgccggactc
     2521 gtcgacgtga aggtggccag tttctccggg acccacagtg cgctgaaatt ggtcgttcca
     2581 cgggcgagga gggggaagcg gtgaagctcg agcgggccta ctacccggcg gacacgtcgt
     2641 cgccggtcct ggagtcgacc gtcggttcgg cgttgcggga ggcggccgaa cggacgccgg
     2701 acggcgcggc catggtggag ggggtgcccg ggccggtgct cgaccggcgg cggtggacga
     2761 acgccgagct gctggccgag gccgaggcgg tg
//
LOCUS       DATGJT010000475         2204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_63198, whole genome shotgun sequence.
ACCESSION   DATGJT010000475 DATGJT010000000
VERSION     DATGJT010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63198"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1341
                     /locus_tag="VKX24_08145"
     CDS             <1..1341
                     /locus_tag="VKX24_08145"
                     /inference="COORDINATES: protein motif:HMM:NF015140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HLJ08494.1"
                     /translation="ALGSVMPTAPHSTVLGHCTDAADRMCYQDESTVVLSNVCPETEE
                     ALFDCHKDDYFSAAASPGGYLAGHWNTARSAFLSTTDGDDPVSITGSSITEGDLGTKP
                     LPFTISLAVAQNNTATVHWQTQDGTATAGSDYQAAGGDVSFAPGETQKTIAVNVVGDF
                     DTEPDEFFTVALSNPVNAVVSGAPGQGIIVNDDPKGQGYWLVASDGGIFAYADSRFFG
                     STGNVRLNQPIVGMTPTPSGLGYWLVARDGGIFAYGDAAFHGSTGDIRLNEPIVGMAA
                     NQAGTGYWLVAADGGVFAFDAPSFGSAAGRARSPVVAMAPTSSGQGYWVVTADGQIFS
                     FGDAANFGTTGPLKQPIVGAAAAPGGHGLWLVARDGGIFAFGEAGFYGSTGALTLNQP
                     IVGMAHSPSGHGYWLVASDGGIFAFGDAGFFGSTGSIKLNKPINGMGALPHPLS"
     gene            1372..1767
                     /locus_tag="VKX24_08150"
     CDS             1372..1767
                     /locus_tag="VKX24_08150"
                     /inference="COORDINATES: protein motif:HMM:NF025734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding domain-containing protein"
                     /protein_id="HLJ08495.1"
                     /translation="MPKWLKLGVIVAVAVFVVAQLVPKRVSDAAVKAEPPWDSPTPLS
                     WWIARYVDGGRRALNFSEFDPNHHRSGERIAHEVQEGNMPPAYYTWFLQHSESKLSAA
                     DKDALIKGLTATYGPAVGVVERKRRPGGD"
     gene            complement(1784..>2204)
                     /locus_tag="VKX24_08155"
     CDS             complement(1784..>2204)
                     /locus_tag="VKX24_08155"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLJ08496.1"
                     /translation="ARVVVAAAVAGAALAAGGVWIARPGGAPAPRTILVTAHHSRFEP
                     DRITVKAGATVWFVVHNSDPIDHEFIIGPPAVHELHERGTPHVHTGVVPGEITVPAGA
                     TVETTWTFGPSGSPPVAYGCHLAGHWAYGMHGLAVIR"
BASE COUNT          323 a          784 c          787 g          310 t
ORIGIN      
        1 gccctcggtt cagtgatgcc gacagcaccg cactccaccg tcctcggcca ctgcaccgac
       61 gccgccgacc gcatgtgcta ccaggacgag tcgaccgttg tcctctccaa cgtctgcccg
      121 gagaccgagg aggcgctgtt cgactgccac aaggacgact acttcagcgc cgccgcctcc
      181 cccgggggct acctggccgg ccactggaac acggcccgca gcgccttcct gtcgactacc
      241 gacggcgacg accccgtcag catcacggga tcgtcgatca ccgaaggcga cctcggtacg
      301 aaaccgttgc cgttcaccat cagcctggcg gtggcgcaga acaacaccgc aacggtgcac
      361 tggcagacgc aggacggcac cgccacggcc gggagcgact accaggcggc cggcggcgac
      421 gtcagcttcg cccccgggga gacgcagaag accatcgccg tcaacgtggt cggcgacttc
      481 gacaccgagc ccgacgagtt cttcaccgtt gccctgtcga atccggtcaa cgccgtggtc
      541 agcggcgcgc cgggccaggg gatcatcgtc aacgacgacc cgaaggggca gggctactgg
      601 ctggtggcgt cggacggcgg gatcttcgcc tacgccgaca gccgcttctt cggctctacc
      661 gggaacgtga ggctcaacca gccgatcgtc ggcatgacgc ccacgccgtc ggggctcggc
      721 tactggctcg tggcccggga cggcggcatc ttcgcctacg gcgacgccgc cttccacggc
      781 tcgaccggcg acatccggtt gaacgagccg atcgtgggca tggccgccaa ccaggccggg
      841 accggctact ggctcgtggc ggcggacggc ggcgtcttcg ccttcgacgc tccgtcgttc
      901 ggatcggccg ccggccgggc ccggtcgccg gtggtggcca tggcgccgac gtcctccggg
      961 cagggctact gggtcgtcac cgccgacggc cagatcttca gcttcggcga cgccgcgaac
     1021 ttcggcacca ccggcccgct gaagcagccg atcgtcgggg ccgccgccgc cccgggtggg
     1081 cacggcctgt ggctggtggc ccgggacggc ggcatcttcg ccttcggcga ggccggcttc
     1141 tacggctcga ccggcgccct cacgctgaac cagccgatcg tcggcatggc gcacagcccg
     1201 tcgggccacg gttactggct cgtggcgtcc gacggcggga tcttcgcctt cggcgacgcc
     1261 ggcttcttcg ggtcgaccgg gagcatcaag ctgaacaagc cgatcaacgg gatgggcgcc
     1321 ctgccgcacc ctctgagcta gcgtcgctgg cccggtggcg aggaggctcc attgccgaag
     1381 tggctcaagc tgggggtcat cgtcgccgtc gccgtgttcg tggtggcgca gctcgtcccc
     1441 aagcgggtgt cggacgccgc ggtgaaggcc gagccgccgt gggacagtcc gactccgctg
     1501 tcgtggtgga tcgccaggta tgtcgacggc ggccgccggg cgctgaactt ctcggagttc
     1561 gacccgaacc accaccggag cggcgagcgg atcgcccacg aggtgcagga gggcaacatg
     1621 ccgccggcgt actacacgtg gtttctgcag cattccgagt cgaagctgtc ggccgccgac
     1681 aaggacgccc tgatcaaggg gctcaccgcc acctacgggc cggcggtcgg cgtggtggaa
     1741 cggaaacggc gcccgggcgg cgactgaggc cggtggcggc cggtcagcgt atgacggcca
     1801 ggccgtgcat gccgtaggcc cagtggccgg ccaggtggca gccgtaggcc accggcggcg
     1861 agcccgacgg tccgaacgtc caggtcgtct cgacagtggc gccggccgga acggtgatct
     1921 cgcccggcac gacgccggtg tggacgtgcg gggtgccgcg ctcgtgaagt tcgtggacgg
     1981 cgggcggccc gatgatgaac tcgtggtcga tgggatcgct gttgtggacc acgaaccaca
     2041 ccgtggcgcc cgccttcacg gtgatccggt cgggctcgaa ccggctgtgg tgggcggtga
     2101 cgaggatcgt ccgcggcgcc ggggcgccgc cggggcgggc gatccacacg ccaccggcgg
     2161 cgagagccgc gccggcgacc gccgccgcca cgaccacccg ggcc
//
LOCUS       DATGJT010000476         2162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1307886, whole genome shotgun sequence.
ACCESSION   DATGJT010000476 DATGJT010000000
VERSION     DATGJT010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307886"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..>2162
                     /locus_tag="VKX24_08160"
     CDS             166..>2162
                     /locus_tag="VKX24_08160"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HLJ08497.1"
                     /translation="MLSGDAAPDPSARHRLPYTVSPSRYQVHLAPDLEAETFSGRVVI
                     AAEAHEPVDRVALHAQELEITMAALRSGDRAIVPEVCQDPEHDDRIVLVLAEQVPAGP
                     FELELDFSGKLLEQLHGFYRSSYTDDEGVSRTIAVTQFEAADARRAFPCFDEPDRKAV
                     FALSADVPEGMDAFSNAPLVSEEPLPGGGRRVRFADTIPMSSYLVALVVGPLVATAPR
                     DVDGVPVRVVHVPGRDRLTGFALDAAEHALRYFVDWFGLPYPGAKLDLVAVPDFAFGA
                     MENLGCVVFRETTLLVDPERASRLEFERVADVVAHEIAHMWFGDLVTMKWWNGIWLNE
                     AFASLMEMFATDHFQPEWQRWVTFGLERDSAMATDALRSTRTVEYPVGSPDEANGMFD
                     VLTYQKGSGVLRMLERYLGGEAFRAGIRRYLADHQLSNTDTADLWDAIAAATSQPVRR
                     IMDSWILLQGGFPLVSASRSGSRLTLRQEPFSYRRPLPEGPASRRWSVPVVLRPVDAG
                     TAPGTATGDEHPDARRVLLEDEQTVEVQPGPVVVNAGGWGFYRVRYDPASLDELLSVV
                     GSLETLERYNLLSDSWAGVVAGEGELRDFLRLAERLRHDPEPGVWRPVSGALDFLDHV
                     VDDQERPRLAAYVRALVAPAFEELGWDRQPGEGERTATLRA"
BASE COUNT          296 a          797 c          727 g          342 t
ORIGIN      
        1 tcgaggtcga ccagcgccat ggagcccttg ttgagcccga gctgtcgcag ttcgtcgtcg
       61 tcggcatggc tgagcacgtc gacgagcggg gaccccagag cgacgacgtc gagatcgggc
      121 atggggcctg accctaatcc cggcgcgcgc tgtagcctcg ccgggatgct ctcaggcgac
      181 gccgcgccgg acccctccgc ccgccaccgc ctgccctaca cggtctcgcc gtcgcggtat
      241 caggtccacc tcgcgcccga cctcgaggcc gagaccttca gcggcagagt ggtcatcgca
      301 gccgaggccc acgaacccgt ggaccgcgtc gcgctgcacg cccaagagct cgagatcacc
      361 atggccgccc tgcgctccgg cgaccgcgcc atcgtgccgg aggtctgcca ggaccccgag
      421 cacgacgacc gcatcgtcct ggtgctggcc gaacaggtcc ccgccggccc gttcgagctc
      481 gagctggact tctccggcaa gctcctcgag cagctgcacg ggttctaccg ctcgagctac
      541 accgacgacg agggcgtcag ccggaccatc gccgtcaccc aattcgaggc ggccgacgcc
      601 cggcgcgcct tcccgtgctt cgacgagccc gaccgcaaag ccgtcttcgc cttgtccgcc
      661 gacgtgcccg aaggcatgga cgcgttctcc aacgctccgc tcgtctccga ggagccgctc
      721 ccggggggcg gacggcgggt tcgtttcgcc gacaccatcc ccatgtcgag ctacctcgtc
      781 gctctcgtcg tcgggccgct ggtggcgacg gctccgcgcg acgtggacgg cgtgccggtg
      841 cgggtcgtgc acgtcccggg acgcgatcgc ctcacgggct ttgccctcga cgccgccgag
      901 cacgccttgc gctacttcgt cgactggttc gggctcccgt accccggggc caagctcgac
      961 ctcgtcgccg tgcccgactt cgccttcggc gccatggaga acctcggctg cgtggtgttc
     1021 cgcgagacga cgctgctcgt cgaccccgaa cgggcgtccc gcctcgaatt cgagcgcgtc
     1081 gccgacgtcg tggcgcacga gatcgcccac atgtggttcg gcgacctcgt gacgatgaag
     1141 tggtggaacg gcatctggct gaacgaggcc ttcgccagct tgatggagat gttcgccacc
     1201 gatcacttcc aacccgagtg gcagcgctgg gtgaccttcg gcttggagcg cgactcggcc
     1261 atggctaccg acgccctgcg gagcacccgg acggtcgaat acccggtggg ctcgcccgac
     1321 gaggccaacg gcatgttcga cgtgctcacc taccagaagg gttcgggggt cctgcgcatg
     1381 ctcgagcgct atctcggtgg cgaggccttc agggcgggca tccgcaggta cctcgccgac
     1441 caccagctgt cgaacaccga taccgccgac ctgtgggacg ccatcgccgc ggcgacaagc
     1501 caaccggtgc gacgcatcat ggacagctgg atcctcctcc aaggtgggtt ccctctcgtc
     1561 tcggcgtccc gttccgggag ccggctcacg ctccgtcagg agccgttctc ctaccgtcgc
     1621 ccactcccgg agggtccggc gtcccgccgc tggtcggtgc cggtcgtgtt gcgccccgtg
     1681 gacgccggca cagcgccggg taccgccacg ggcgacgagc atcccgacgc ccggcgcgtg
     1741 ctgctcgagg acgagcagac cgtcgaggtg caaccggggc cggtcgtcgt gaacgccgga
     1801 ggctggggct tctaccgggt gcgctacgac ccggcgtcgc tcgacgagct gctctcggtt
     1861 gtggggtccc tcgagacctt ggagcgctac aacctgctct ccgacagctg ggccggggtc
     1921 gtcgccggcg agggtgagct gcgcgacttc ctccggctgg ccgagaggct gcgccacgac
     1981 cccgaacccg gtgtgtggcg cccggtgtcg ggcgccctcg acttcctcga ccatgtggtg
     2041 gacgaccagg agcggcctcg gctcgctgcc tacgtccgtg cgttggtggc accggccttc
     2101 gaggagctcg gctgggaccg tcagccaggt gagggcgagc gcacggccac cctgcgcgcc
     2161 ga
//
LOCUS       DATGJT010000477         6277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_63965, whole genome shotgun sequence.
ACCESSION   DATGJT010000477 DATGJT010000000
VERSION     DATGJT010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6277
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63965"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2011
                     /locus_tag="VKX24_08165"
     CDS             <1..2011
                     /locus_tag="VKX24_08165"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08498.1"
                     /translation="LGPAVDLITIEPGCESAAAAALGEVLRGVVARDAGSARAALARL
                     RSTGTAGTVLVPDSAGEAEPAFENRCIPVDERQLDGPAGSRPVAGCVGTAVPGLGPVL
                     GRILAGTVVVDGTWEQALGVALAHPELVVVTPDGDRFDGRGAWHAGGTAIGATPAAAD
                     DAHRRAVEAAGARDRAEAALAEARAALDEARRWEAAGDKALDSQRARQAAVASAAARL
                     RTERAEAEAEAGALDEHAAALAAQAEAEAARRRELETALPALEAAEDDERRQESARRA
                     AAEALDAETRALAAARRDHDLKVAAVDERRRGLAKRLEEVEARLVRHGQARQQAEQRR
                     EALARRGDAYAAVERAIQGRIALLAEVHGRLRDQRRERSEAARAAAARLDALRRERTA
                     AERAVGDARERRARVEIEEAEVRTKLDAATEACRRDLECEPDVALAAPAPPCPDGTTL
                     PARARDIERELRQMGAINPLALEEYEAQKERYTLLESQLEDVKAARRDLAQIIRQVNE
                     EIATLFASAYEDTERHFESLIATLFPGGSGRLRLTDPEDPLNTGIEIEARPSGKSVRR
                     LSLLSGGERSLTALAFLFAVFRARPTPFYILDEVEAALDDVNLCRFVDLIHEFRHEAQ
                     LLVVSHQKRTMEAADCLYGVSMPPGGSSIVVTQRVPSAEPAAVAV"
     gene            2266..2862
                     /locus_tag="VKX24_08170"
     CDS             2266..2862
                     /locus_tag="VKX24_08170"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HLJ08499.1"
                     /translation="MLIVALALLWTQFPFGSGGASAEGNHELALCCAWGESLAHGNLT
                     YSIASPDPASAQVIRAAVEEWDADLLALTLSEVAPGQPADITIRFIPAEGRTEGQAVT
                     SFTHRGLIGKVEITIQGALAPANSGGLNQIAKHEFGHALGLGHANYEGNLMSPAVSPD
                     AQPVPPCVIQGVLEANRWEMLTPQPKHPTPPRVSQVAC"
     gene            2957..3400
                     /gene="cynS"
                     /locus_tag="VKX24_08175"
     CDS             2957..3400
                     /gene="cynS"
                     /locus_tag="VKX24_08175"
                     /EC_number="4.2.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017729407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008824 - cyanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanase"
                     /protein_id="HLJ08500.1"
                     /translation="MERTQCTQRILDAKAAKGLTYAEIGGKIGRSEVWTAAAIMGQAQ
                     MDASEAEGLCDLLGLEPEVAHTLQAHPMRGSLDTSVPVDPLIYRFHEITQVYGTTIKA
                     VINEKFGEGIMSAIDFELSIDRKEDPKGDRVVVTMDGKFLPFRKW"
     gene            complement(3404..5509)
                     /locus_tag="VKX24_08180"
     CDS             complement(3404..5509)
                     /locus_tag="VKX24_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018222420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HLJ08501.1"
                     /translation="MTHASPTAPVAKRVPHVHAAHGDERPDDYHWLRDRDDPDVTAYL
                     EAENAYADAVLEPLRPLQEKLYAEIVSRIQETDLSVPVPHGPFLYYSRSVEGLQYAIH
                     CRKAAGAAGTGEGGTGEGGTGEGSPEQVLIDENVLAEGHEYCALGALEVSPDHRLLAW
                     SVDTEGDEEHVLRIRDLETGRDHPEAIPNTSYGVAWAGDNRTFFYTTLDESRRPWQVW
                     RHRLGTDPGDDVLVHQEDDDRFFCSVERTRSGGFIVIDLRSAVTSETRLLPADDPDGS
                     FTVLHPRRQDVEYGLDHHTDRFFIMTNEDAPNFRLVEAPVADPSPSNWRELIPHSADV
                     KLEGLAAFTGHLVVLERAEAVRRLRVIDLARGGHHVIEQPEAVCRVGIPEEDNPEFER
                     RTLRYTYTSLVTPQSIFDYDLDTRERTLLKQEPVLGGYDPAEYETGRLWATAPDGTRV
                     PISYVAKKGVARDGSAPCVLYGYGSYESSSDPRFSSLRLSLLDRGFVWAIAHVRGGGE
                     MGRAWYESGKLVHKMNTFTDFVACAEHLVTEGWTSAGRLAILGGSAGGLLVGAAVNIR
                     PDLFRAAVAEVPFVDVVSTISDPTLPLSVIEWEEWGNPADPEFYATMKAYSPYDNVRP
                     VRYPDLFVTAGLNDPRVSYWEPAKWVAKLRVTADPETRILLRTEMGAGHGGPSGRYDA
                     WRKEAEIFAFLLDAVGLTE"
     gene            5549..>6277
                     /locus_tag="VKX24_08185"
     CDS             5549..>6277
                     /locus_tag="VKX24_08185"
                     /inference="COORDINATES: protein motif:HMM:NF014880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HLJ08502.1"
                     /translation="MALVIVLGIVVLLLVAAVAGLSVSRRSQRRMDAAERSAITQAKP
                     LRPQAPAQVEIVLPPGEDVQIPPQEPVAQEPLPDERVPEEPGPEERVPEEPVPEEPVP
                     VRPRLRDRLGKARELLAGYFGDIRGRSAIDDDVWDEIEEALIRADVGVGPTERILDDL
                     RRRAKEAAVSSPADLLDLLKADLVDTLRAADRSLSFEPGQPNVWMFVGVNGVGKTTSI
                     GKIAQREAAAGRNVVMAAADTFRAA"
BASE COUNT          879 a         2256 c         2341 g          801 t
ORIGIN      
        1 gctcggcccg gccgtcgacc tgatcacgat cgagccgggc tgtgagtccg ccgcggcggc
       61 cgccctcggc gaggtcctgc ggggcgtggt cgcccgcgac gccggctcgg cccgcgccgc
      121 gctggcccgg ctgcgctcca ccggcaccgc cggcaccgtc ctcgtccccg attcggccgg
      181 cgaagccgaa ccggcgttcg aaaaccgctg tatcccggtc gacgaacgcc agttggacgg
      241 gccggcgggt tcccggcctg tcgccgggtg cgtcgggacc gcggttcccg gcctcgggcc
      301 cgtcctcggg cggatcctgg cggggaccgt cgtggtcgac gggacgtggg agcaggcgct
      361 cggcgtggcg ctggcccatc cggagctcgt cgtcgtgacg ccggacgggg accgcttcga
      421 cgggcgcggc gcctggcacg ccggcgggac cgccatcggc gccaccccgg cggcggccga
      481 cgacgcccac cggcgcgcgg tcgaggcggc cggagcgagg gaccgggccg aggcggcgct
      541 cgccgaggcc cgcgccgcgc tcgacgaagc gcgccgctgg gaggccgccg gcgacaaggc
      601 cctcgactca cagcgggccc ggcaggcggc cgtcgcctcc gccgccgccc ggctccggac
      661 cgagcgggcc gaggccgagg ccgaggccgg cgccctcgac gagcacgccg ccgccctggc
      721 cgcccaggcc gaggccgagg ccgcccgccg ccgggagctc gagaccgccc tcccggctct
      781 cgaagccgcc gaggacgacg agcgccgcca ggagtccgcc cgccgggcgg cggccgaggc
      841 gctcgacgcc gagacccggg cgctggccgc cgcccgccgt gaccacgacc tgaaggtcgc
      901 cgccgtcgac gagcgccgcc ggggcctggc caagcgcctg gaagaggtcg aggcccgcct
      961 cgtccgccac ggccaggccc gccagcaggc cgagcagcgc cgggaggccc tggcccgccg
     1021 cggcgacgcc tacgccgccg tcgagcgggc gatccagggc cggatcgccc tgctggccga
     1081 ggtccacggc cgcctccggg accagcgtcg tgagcggtcg gaggcggcca gggcggccgc
     1141 cgcccggctc gacgccctcc gccgggagcg gacggccgcc gagcgggccg tcggcgacgc
     1201 ccgggagcga cgggcccggg tcgagatcga ggaggccgaa gtccggacca aactcgacgc
     1261 cgccaccgaa gcctgccggc gcgacctcga gtgcgagccc gacgtggccc tggccgcccc
     1321 ggctccgccc tgccccgacg gcacgacgct gcccgcccgg gcccgggaca tcgagcggga
     1381 gctgcggcag atgggggcca tcaaccccct ggcgctcgag gaatacgagg cccagaagga
     1441 gcgctacacg ctgctggagt cgcagctgga agacgtcaag gccgcccggc gggacctggc
     1501 ccagatcatc aggcaggtca acgaggagat cgccaccctc ttcgcctcgg cctacgagga
     1561 caccgagcgc cacttcgagt cgctcatcgc cacgctgttc cccggcgggt cggggcgcct
     1621 tcggctgacc gacccggagg atccgctcaa caccggcatc gagatcgagg cccgcccgtc
     1681 gggcaagagc gtgcgccggc tctcgctgct ctccggcggg gagcggtcgc tcaccgccct
     1741 ggccttcctc ttcgccgtct tccgggcccg gccgacgccc ttctacatcc tcgacgaggt
     1801 cgaggcggcg ctcgacgacg tcaacctctg ccggttcgtc gacctgatcc acgagttccg
     1861 ccacgaggct cagctcctgg tggtgagcca ccagaagcgg acgatggagg ccgccgactg
     1921 cctctatggc gtgtcgatgc cgccgggcgg gtcgagcatc gtcgtgaccc agcgggtgcc
     1981 gagcgccgag ccggcggccg tcgccgtcta aagaaagttt cgacagcaag gccctggctg
     2041 aggagggcct gagaccctgt cacctttggc cccacggcca acaggagccc cgccggccac
     2101 tagcttctgt ccgatttgcc ggaatatgct cggcccgggt tgcggcggag tacctgggga
     2161 gggcctttga gggaccgggt cgatgcctcc gtggcggggc cggcgatggt cgggatgtcg
     2221 cgtccggggc cgagccgacc gccccggtcc cgccggacgg caagggtgct catcgtcgcc
     2281 ctggcgctcc tgtggacgca gttcccgttc ggcagcggag gcgccagcgc cgagggcaac
     2341 cacgagctgg ccctgtgctg cgcctggggc gagagcctgg cgcacggcaa tctgacctac
     2401 agcatcgcgt cgcccgaccc ggccagcgcc caggtcatca gggccgcggt ggaggagtgg
     2461 gacgccgacc tcctggcgct cacgctgagc gaggtcgcac ccggccagcc cgccgacatc
     2521 accatccgct tcataccggc cgagggccgc acggagggtc aggcggtgac gagcttcacc
     2581 caccggggcc tcatcggcaa ggtggagatc accatccagg gcgccctggc gccggccaac
     2641 tccggcggcc tcaaccagat cgccaagcac gagttcggcc acgccctcgg gctgggccac
     2701 gccaactacg agggcaacct catgtcgccg gcggtgagcc ccgacgccca gcccgtcccg
     2761 ccctgcgtga tccagggcgt cctcgaggcc aaccggtggg agatgctcac gccgcagccg
     2821 aagcatccaa ccccgccccg ggtgtcccag gtcgcctgct gagccggcga atgtgacgcg
     2881 ccggcgtcag atggcggtcc gcggatcgaa acacaaaccc aaacctggtg tgacgagcgc
     2941 gtcgtagggt tgcgccatgg agcgcactca atgcacgcag cggatcctcg acgccaaggc
     3001 ggccaaaggc ctgacgtacg ccgagatcgg cgggaagatc ggccggtccg aggtgtggac
     3061 ggcggcggcg atcatgggcc aggcccagat ggacgcctcc gaggcggaag gcctctgtga
     3121 cctcctcggg ctcgagcccg aggtggccca caccctccag gcgcacccga tgcggggatc
     3181 gctggacacg tccgtgcccg tcgacccgct gatctaccgg ttccacgaga tcacccaggt
     3241 ctacggcacg acgatcaagg cggtcatcaa cgagaagttc ggcgagggca tcatgagcgc
     3301 catcgacttc gagctctcga tcgaccgcaa ggaagacccc aagggcgacc gcgtcgtcgt
     3361 caccatggac gggaagttcc tgcccttccg gaagtggtag cggctactcg gtgagcccga
     3421 cggcgtcgag gaggaaggcg aagatctcgg cctccttgcg ccaggcgtcg tagcggcccg
     3481 aggggccgcc gtggcccgcg cccatctccg tccgcaggag gatccgcgtc tccgggtcgg
     3541 ccgtgacccg gagcttcgcc acccacttgg ccggttccca gtacgagacg cgggggtcgt
     3601 tcagcccggc ggtgacgaag aggtcgggat accgcaccgg ccggacgttg tcgtagggcg
     3661 agtaggcctt catcgtggcg tagaactcgg ggtcggcggg gttgccccac tcctcccact
     3721 cgatgaccga gagcgggagc gtcgggtcgg agatcgtgct gacgacgtcg acgaagggca
     3781 cctcggccac cgccgcccgg aagagatcgg gacggatgtt gacggccgcc ccgaccagca
     3841 gcccgccggc gctgccgccg aggatcgcca gccgcccggc cgacgtccat ccctcggtga
     3901 cgaggtgctc ggcgcaggcg acgaagtcgg tgaaggtgtt catcttgtgg acgagcttgc
     3961 cggactcgta ccacgcccgc cccatctcgc cgccgccgcg gacgtgggcg atggcccaca
     4021 cgaagccccg gtcgagcagg ctgaggcgca gtgacgagaa acggggatcg gagctcgact
     4081 cgtaggagcc gtagccgtag aggacgcagg gcgcggagcc gtcccgggcg acgcccttct
     4141 tcgccacgta ggagatcggc acccgggtgc cgtcgggggc ggtggcccag agccggccgg
     4201 tctcgtactc cgccgggtcg tagccgccga ggaccggctc ctgcttgagg agcgtgcgct
     4261 cccgggtgtc gaggtcgtag tcgaagatcg actgcggagt aaccagcgac gtgtaggtgt
     4321 agcggagcgt gcgccgctcg aactcggggt tgtcctcctc gggtatgccc acccggcaga
     4381 ccgcctcggg ctgctcgatc acgtggtggc cgccgcgggc caggtcgatg acccgcagcc
     4441 ggcggacggc ctccgcccgc tccaggacca cgaggtggcc ggtgaaggcg gccagccctt
     4501 ccagcttcac gtcggcggaa tgggggatca gctcccgcca gttcgacggg gacgggtcgg
     4561 cgaccggcgc ctcgaccagc cggaagttgg gcgcgtcctc gttggtcatg atgaagaacc
     4621 ggtcggtgtg gtggtcgagg ccgtactcca cgtcctgtcg gcgggggtgg agcacggtga
     4681 acgagccgtc ggggtcgtcg gccggcagca gccgggtctc ggaggtgacg gcgctgcgga
     4741 ggtcgatcac gatgaagccg ccgctgcggg tgcgctcgac ggagcagaag aagcggtcgt
     4801 cgtcctcctg gtggacgagg acgtcgtcgc cggggtcggt ccccagccgg tggcgccaga
     4861 cctgccaggg ccggcggctc tcgtcgaggg tggtgtagaa gaacgtgcgg ttgtcgccgg
     4921 cccaggccac gccgtaggac gtgttgggga tggcctcggg atggtcgcgg ccggtctcga
     4981 ggtcgcggat gcgcaggacg tgctcctcgt cgccctcggt gtcgactgac caggccagga
     5041 gccggtggtc gggactgacc tcgagggcgc cgagggcgca gtactcgtgg ccctcggcga
     5101 ggacgttctc gtcgatgagg acctgctccg ggctgccctc gccggtgccc ccctccccgg
     5161 tgcccccctc cccggtgccg gcggccccgg cggccttgcg gcagtggatg gcgtactgga
     5221 gcccctcgac gctgcgggag tagtagagga acgggccgtg ggggacgggc accgacaggt
     5281 ccgtctcctg gatgcggctc acgatctcgg cgtagagctt ctcctgcagc ggccgcagcg
     5341 gctccaggac cgcgtcggcg taggcgttct cggcctcgag ataggcggtg acgtcggggt
     5401 cgtcgcggtc ccggagccag tggtagtcgt ccggtcgctc gtcgccgtgg gccgcatgca
     5461 catgggggac gcgcttggcc accggcgccg tgggggaggc gtgggtcacg ggtggggaca
     5521 ctaccggcgg ccggtaggat cgcccgccat ggcgctcgtg atcgtcctgg ggatcgtcgt
     5581 cctcctcctg gtggccgccg tggccggcct gtcggtgtcc cgccggtccc agcgccggat
     5641 ggacgccgcc gagcgctccg cgatcaccca ggcgaaaccg ctgcgaccgc aggcgcccgc
     5701 ccaggtggag atcgtgctgc cacccggcga ggacgtccag attccaccgc aggagccggt
     5761 ggcccaggaa ccgctccccg acgagcgggt gcccgaggaa ccggggcccg aggagcgggt
     5821 gcccgaggaa ccggtgcccg aggagcccgt ccccgtccgg ccccgactgc gggaccggct
     5881 ggggaaggcc cgggagctgc tggccggcta cttcggcgac atccggggcc ggagcgccat
     5941 cgacgacgac gtatgggacg agatcgagga ggcgctcatc cgggccgacg tcggtgtggg
     6001 gcccacggag cggatcctcg acgacctccg ccgccgggcc aaggaggccg cggtgtcgag
     6061 tccggccgac ctgctcgacc tgctcaaggc cgacctcgtc gacacgctgc gggccgccga
     6121 ccggtcgctg tccttcgagc ccggccagcc caacgtctgg atgttcgtcg gggtcaacgg
     6181 cgtcgggaag acgaccagca tcggcaagat cgcccagcgg gaggccgccg ccggccgcaa
     6241 cgtggtgatg gcggcggccg acacgttccg ggcggcc
//
LOCUS       DATGJT010000478         4091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_64046, whole genome shotgun sequence.
ACCESSION   DATGJT010000478 DATGJT010000000
VERSION     DATGJT010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4091
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64046"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VKX24_08190"
     CDS             <1..541
                     /locus_tag="VKX24_08190"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011718892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HLJ08503.1"
                     /translation="LGPLVTDIAPGYDHITSAIGAAMIGWYGASMLCYVTPKEHLGLP
                     DRDDVKAGVIAYKIAAHAADLAKGHPGAQAWDDALSKARFEFRWADQFELSLDPETAR
                     SFHDETLPAEGAKTAHFCSMCGPKFCSMRITADVRAYAEAHGLSPEAAVEVGLKEKAA
                     EFVDHGAKVYLPVEAGSGA"
     gene            complement(530..1225)
                     /locus_tag="VKX24_08195"
     CDS             complement(530..1225)
                     /locus_tag="VKX24_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08504.1"
                     /translation="MATAHVLVRVWLPDRPGALGQVASRIGSVRGDIIGVDVLECDGG
                     VAIDEFAVNLADAELVPMLVREIEEVDGASVEEVRVVNHFPDPRLDALEGAARLCQAA
                     DVKELHGVLVDQVRKEFLAEWAALVVDVGPEEEHVGGNGAGGERAVVAATAGDAPGAD
                     HLEALALGVAASPLVASGAAGPEDLAAAPLPRHRAVLLASRSGYALRERERGQLIALG
                     RIADRLWTLLSSA"
     gene            1252..1848
                     /gene="nadD"
                     /locus_tag="VKX24_08200"
     CDS             1252..1848
                     /gene="nadD"
                     /locus_tag="VKX24_08200"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HLJ08505.1"
                     /translation="MTERIGVYGGTFDPVHVAHVVAAVEARRALGLDRVILVPAGDPW
                     QKRGSVAAPAADRLAMVQAAVDGIDGLEVSPLEVERQGPSYTYQTLAALAGPGRELFL
                     IVGADVAGTMKTWVGIERLPGLATLVVVDRSGDAPPDEGPPADGLPDGWACRRVAIPR
                     LDVSSTELRARAARGWPLDGLVPPGAVRLIAERGLYRR"
     gene            2011..2352
                     /gene="rsfS"
                     /locus_tag="VKX24_08205"
     CDS             2011..2352
                     /gene="rsfS"
                     /locus_tag="VKX24_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017987737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HLJ08506.1"
                     /translation="MAARAAAAKNGADTLVLDVGPIIGITEVFVITSGRNVRQVRTIA
                     EEIEKKLKEEGHPGPIRTEGLRDASWVLLDYGDFVAHVFLEETRGYYNLDRLWADAPR
                     LAWEESTAAVS"
     gene            2478..3473
                     /locus_tag="VKX24_08210"
     CDS             2478..3473
                     /locus_tag="VKX24_08210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08507.1"
                     /translation="MAGVVVMAMGLGLVMGPPGAGAADTAPPLVTTVQKVVDGVGDVV
                     NGVTSGLFDNGRADITGASLEWAPGWIRMKVQLKNPTDPLKDAAWSDADDLEWDFDTN
                     NDGKVDYTLEFATDKGELYGAVFDASKPNADSVCDADSASFSAQDGYTVVFDPKCIGS
                     PKSLYWAVMSFISSNPKDANAQVVSDRVPDVGFTAQAAPGEPAAAPAFQPPPPPVGPP
                     PGAAPAGGTRAPASVGPNIAAPPKSAAAPGAPGRTASGAPGPSSAKSPAPTAGAPASA
                     APGGAPTTGAAPAPADLARTGSTSSRDGLFGLGLMLLGFGVVVMTRPTRRAGVPA"
     gene            3614..>4091
                     /locus_tag="VKX24_08215"
     CDS             3614..>4091
                     /locus_tag="VKX24_08215"
                     /inference="COORDINATES: protein motif:HMM:NF014646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ08508.1"
                     /translation="MEIEQCRMDLESAARALGVHYQTAYRWVRTGLLPAVKADQGYRL
                     DPRDVEALAAARRAPRPLSYTGRRRDWDRLREQLYEALLAGDETAARRVFERVRLGRV
                     PLLEQCRELLTPTMERLADAWAGGELSAARLRLAIGIAERVLALAIGWVPAGSRGLA"
BASE COUNT          544 a         1510 c         1511 g          526 t
ORIGIN      
        1 gctcggcccg ctcgtgaccg acatcgcccc cggctacgat cacatcacct cggccatcgg
       61 cgccgccatg atcggctggt acggcgcgtc gatgctctgc tacgtcacgc ccaaggagca
      121 cctcggcctg cccgaccggg acgacgtcaa ggccggcgtc atcgcctaca agatcgccgc
      181 ccacgccgcc gacctggcca agggccaccc gggggcccag gcgtgggacg acgccctctc
      241 caaggcccgc ttcgagttcc gctgggccga ccagttcgag ctgtcgctcg acccggagac
      301 ggcccggtcg ttccacgacg agacgctgcc cgccgagggg gccaagaccg cccacttctg
      361 ctcgatgtgc gggccgaagt tctgctccat gcggatcacc gccgacgtgc gggcctacgc
      421 cgaggcacac ggcctcagtc cggaagcggc ggtggaggtc ggcctgaagg agaaggcggc
      481 ggagttcgtc gaccacggcg ccaaggtcta cctgccggtc gaggcgggct caggcgcttg
      541 acaggagcgt ccagaggcgg tcggcgatcc ggccgagggc gatgagctgg ccccgctcgc
      601 gctcccggag ggcgtagccg ctgcggctgg ccagcagcac ggcccggtgg cggggcagcg
      661 gggcggcggc caggtcctcc ggcccggcgg cgccgctggc caccagcggg gaggcggcca
      721 cacccagcgc cagggcctcg aggtggtcgg cgccgggggc gtcgccggcc gtggcggcca
      781 cgacggcccg ctcgccacct gcgccgttgc ctccgacgtg ctcctcctcc gggccgacgt
      841 ccaccacgag ggcggcccac tcggccagga actccttgcg gacctggtcg acgagcaccc
      901 cgtggagctc cttcacgtcg gcggcctggc agaggcgggc ggcgccctcc agggcgtcga
      961 ggcgggggtc ggggaagtgg ttgacgaccc gcacctcctc gaccgaggcg ccgtcgacct
     1021 cctcgatctc ccgcaccagc atcggcacga gctcggcgtc ggccaggttg acggcgaact
     1081 cgtcgatggc cacgccgccg tcgcactcga ggacgtcgac gccgatgatg tcgccccgga
     1141 cggagccgat ccgggaggcc acctgaccca gggcccccgg ccggtcgggc agccacaccc
     1201 gcacgaggac gtgggctgtc gccatgtcgg caccttatgc tgcccgccat cgtgacggag
     1261 cggatcggtg tctacggcgg gacgttcgac cccgtccacg tcgcccatgt cgtggccgcg
     1321 gtggaggctc gccgggcgct cgggctcgac cgggtgatcc tcgtcccggc cggcgacccc
     1381 tggcagaagc ggggcagcgt ggccgccccg gccgccgacc ggctggccat ggtgcaggcg
     1441 gcggtggacg ggatcgacgg gctcgaggtc tcgccgctgg aggtcgagcg ccaggggccg
     1501 agctacacgt accagacgct cgcggcgctg gccgggccgg gacgggagct cttcctgatc
     1561 gtcggcgccg acgtggcggg cacgatgaag acgtgggtgg ggatcgagcg gctcccgggg
     1621 ctggcgacac tggtggtggt cgaccgctcc ggggacgccc cgcccgacga ggggccgccg
     1681 gcggacggcc tccccgacgg ctgggcctgc cggcgcgtcg ccatcccccg cctcgacgtg
     1741 tcgtcgaccg agctgcgggc ccgggcggcc cggggctggc ccctcgacgg gctggtgccg
     1801 ccgggcgcgg tccggctgat cgccgagcgg ggcctgtacc gccgctgacc cggcggtctg
     1861 gacggtcccg atagactggc ggtcagatga cggcgatttc ggcaggtttg gcgtcggggc
     1921 ccgatcccgg cgcctttttg cgtcccggcc cgccgccgtc cccgcaccct gaggagggat
     1981 cccacggaag acgcccgtag tcgcagcatc gtggccgccc gggcggcggc ggcgaagaac
     2041 ggagcggaca cgctcgtcct cgatgtcggc ccgatcatcg ggatcaccga ggtgttcgtg
     2101 atcaccagtg gcaggaacgt gcgccaggtg cgcacgatcg ccgaggagat cgagaagaag
     2161 ctgaaggagg agggccatcc cgggcccatc cgcaccgagg gcctgcggga cgcctcctgg
     2221 gtactgctcg actacggcga cttcgtggcc cacgtcttcc tggaggagac gaggggctac
     2281 tacaacctgg accgcctctg ggccgacgcg ccccgtctgg cctgggagga gtcgacggcc
     2341 gcggtatcct gaatggtgca ctggggatga aagcagggaa atcgcccaaa ctgtcgaaaa
     2401 acgacaaaag gggcgggtag tgggccccgg cgcctgacgt gctcgtcgac tgggggtggc
     2461 tcgtggggat tcgccgattg gcgggtgtcg tggtcatggc catggggctc gggctggtca
     2521 tggggccgcc cggagccggc gcggccgaca cggcgccgcc cctcgtcacg acggtccaga
     2581 aggtcgtcga cggcgtcggc gacgtcgtca acggcgtcac ctccggcctc ttcgacaacg
     2641 gccgggccga catcaccggt gcctcgctcg aatgggcgcc gggctggatc cggatgaagg
     2701 tccagctgaa gaacccgacc gatcccctga aggacgcggc ctggagcgat gccgacgacc
     2761 tcgagtggga cttcgacacc aacaacgacg gcaaggtcga ctacaccctc gagttcgcca
     2821 ccgacaaggg cgagctctac ggcgcggtct tcgacgccag caagcccaac gcggactcgg
     2881 tgtgcgacgc cgactcggcc agcttctcgg cccaggacgg ctacaccgtc gtcttcgacc
     2941 cgaagtgcat cgggagtccg aagtccctct actgggcggt gatgtcgttc atcagctcca
     3001 accccaagga cgccaacgcc caggtggtca gcgaccgcgt ccccgacgtg gggttcacgg
     3061 cccaggccgc cccgggcgag ccggccgccg ccccggcgtt ccagcccccg ccgccccccg
     3121 tgggcccgcc gccgggtgcc gcgccggcgg gtggcacccg ggctccggcg tccgtcgggc
     3181 ccaacatcgc cgctccgccg aagtccgccg ccgctccggg tgcgccgggc cggacggcct
     3241 cgggtgcgcc gggtccgtcg tcggccaagt cgccggcgcc gaccgccggc gcgccggcct
     3301 cggcggcccc tggcggcgcg ccgacgaccg gagcggcccc ggctcccgcg gacctggccc
     3361 ggaccgggtc cacgagctct cgggacgggc tcttcgggct cgggctcatg ctgctcggct
     3421 tcggcgtcgt ggtcatgacc cggccgaccc gccgggccgg cgtaccggcc tgacaccggc
     3481 ctgatcccgg gccgtctcat cccggccaaa ccgcccgaag ggcgaagacc ttccaccagc
     3541 ggactcgacc cgcgctccgg ccgtgccgat ccaaaggcgt cggatcggga caccgtggct
     3601 cggatgggtg ggaatggaaa tcgagcagtg ccggatggac ctggagtcgg ccgcccgcgc
     3661 tctcggcgtc cactaccaga cggcctaccg ctgggtgcgc accgggctcc tgccggccgt
     3721 gaaggccgac cagggctacc ggctcgatcc ccgggacgtc gaggcgctgg ccgccgcccg
     3781 gcgggccccc cgcccgctgt cgtacaccgg ccgccgccgg gactgggacc ggctgcggga
     3841 acagctctac gaggccctgc tggccggtga cgaaaccgcc gcccgccggg tcttcgagcg
     3901 ggtccggctc ggccgggtcc cgctcctgga gcagtgccga gaactcctga cgcccacgat
     3961 ggagcggctc gccgacgcct gggcgggcgg cgagctgtcg gccgcccggc tccggctggc
     4021 gatcggcatc gccgagcggg ttctggccct ggccatcggc tgggtgccgg ccggatcccg
     4081 gggcctggcg c
//
LOCUS       DATGJT010000479         2274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_581498, whole genome shotgun sequence.
ACCESSION   DATGJT010000479 DATGJT010000000
VERSION     DATGJT010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_581498"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..756)
                     /locus_tag="VKX24_08220"
     CDS             complement(<1..756)
                     /locus_tag="VKX24_08220"
                     /inference="COORDINATES: protein motif:HMM:NF037626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HLJ08509.1"
                     /translation="MVQEDDRTLSPLEALAPLLRAHPELGSVLGRTNATLAVPAAARP
                     LVLGGLAHLSGLRPFLVVTPTLADAEHLAEDLRCFLEPGTVEVFAPWETLPLERVSPD
                     VHTMGTRLSVLWRLVGDEVLPGDPGLRVVVAPVRAVLQRLGPVDDAARPLVVSRGARL
                     EQAELLARLVDLGYRREHQVEHRGEFAVRGGIVDVFASTAEEPFRLDLFGDEVDRLSA
                     FDVGDQRSTAELEQAVVFSCRELVLTGAIRDRAR"
     gene            complement(758..1384)
                     /gene="pth"
                     /locus_tag="VKX24_08225"
     CDS             complement(758..1384)
                     /gene="pth"
                     /locus_tag="VKX24_08225"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HLJ08510.1"
                     /translation="MLAHRSSTRPARRGTPAEFLVVGLGNPGAEFAGTRHNVGADAVV
                     ELATRHGEGRLAPLKRQRALVEEVAIDGHRVALAVPTTYMNDSGSAVVLLVRRFGVED
                     PSSLLIVHDELDLPPGTLQVKEGGGLAGHNGLRSVEAHLHTNAFVRVRVGIGKPRGPG
                     ADHVLGKPSRSDREALAVATARAADAVETIVSDGVAAAMNRFNTRAER"
     gene            complement(1398..2069)
                     /locus_tag="VKX24_08230"
     CDS             complement(1398..2069)
                     /locus_tag="VKX24_08230"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HLJ08511.1"
                     /translation="MPEIVLEAQVGRAVGTRASRRLRREGLIPGTVYGHGTEPVSVAV
                     EARELRNALSGDSGSNTLLSLKAGKQTYLTLAREMQRHPVKGTVTHVDFVIVRRDEVI
                     AAEVPVNLVGEAVEVAHGDGLVEQQLFSLSVRARPADIPHAIEVDISSLTIGSSLRVA
                     DLTLPASVSVDIDPEVTVVVGQPPRVEAAPAGEAAEGEGAEGAPAEVPAEAPSEAAAS
                     TDDEA"
BASE COUNT          294 a          821 c          865 g          294 t
ORIGIN      
        1 ccgcgcccgg tcccggatcg ccccggtcag gaccagctct cggcaggaga agaccaccgc
       61 ctgctcgagc tccgccgtcg accgctggtc gcccacgtcg aaggcgctca gccggtcgac
      121 ctcgtcgccg aagagatcga ggcggaaggg ctcctccgcg gtcgacgcga agacgtcgac
      181 gatccccccg cgcaccgcga actcgccgcg gtgctcgacc tggtgctcac ggcgatagcc
      241 gaggtcgacg agtcgcgcga ggagctcggc ctgttcgagg cgcgcccctc gcgacacgac
      301 gagcgggcgg gcggcgtcgt ccactggtcc gagccgctgg agcacggcgc ggaccggcgc
      361 gacgacgacc cggagcccgg gatcgcccgg gaggacctcg tcgcccacca gccgccagag
      421 cacggacagc cgggtgccca tcgtgtggac gtcgggactg acccgttcga gcgggagggt
      481 ctcccagggg gcgaagacct cgaccgtccc gggctcgagg aaacacctca ggtcctcggc
      541 taggtgttcg gcgtcggcca gggtcggggt gacgacgagg aacgggcgca gccccgagag
      601 gtgcgccagc cccccgagca cgagcggccg ggccgccgcc ggcaccgcca gggtggcgtt
      661 cgtccggccc agcaccgagc cgagctcggg atgggcgcgc aggagcggcg cgagcgcctc
      721 aagggggctc agggtgcggt cgtcctcctg gaccatctca gcgctcggct ctcgtgttga
      781 agcggttcat ggcggcggcc accccgtcgc tcacgatcgt ctcgaccgcg tcggcggccc
      841 gtgccgtcgc caccgcgagc gcctcacggt ccgaacgcga cggtttgccg agcacgtggt
      901 cggcgccggg ccccctgggc ttgccgatcc cgacgcgcac ccggacgaag gcgttcgtgt
      961 gcaggtgggc ctcgaccgag cgcagcccgt tgtgaccggc gaggccgccg ccctccttca
     1021 cctgaagggt gccgggaggg aggtcgagct cgtcgtggac gatgagcagg gagctcgggt
     1081 cctccacccc gaagcgccgg acgagcagca ccacggcgct ccccgagtcg ttcatgtagg
     1141 tggtcgggac ggcgagcgcc acccggtgtc cgtcgatggc gacctcctcg accagggcgc
     1201 gctgccgctt gagcggggcc aggcgaccct cgccgtggcg cgtcgccagc tcgacgaccg
     1261 cgtcggcgcc gacgttgtgg cgggtcccgg cgaactcggc accggggttg ccgaggccga
     1321 cgaccaggaa ctcggccggc gtcccgcgtc tcgccgggcg ggtggacgag cggtgtgcga
     1381 gcagcctcgc cagggggcta cgcctcgtcg tcggtgctcg ccgcggcttc gctcggagcc
     1441 tcggccggga cctcggccgg cgcgccctcc gcgccctcgc cctccgctgc ctcgccggcg
     1501 ggggcggcct cgacccgcgg cggctgtccg acgaccacgg tgacctccgg gtcgatgtcg
     1561 acggagaccg atgccgggag ggtcaggtcg gcgacgcgca gcgagctgcc gatggtgagc
     1621 gaggagatgt cgacctcgat ggcgtggggg atgtcggcgg gccgtgcccg gaccgagagg
     1681 ctgaacagct gctgctcgac caggccgtcg ccatgggcca cctcgaccgc ctcgccgacg
     1741 aggttcaccg ggacctcggc cgcgatgacc tcgtcccggc gcacgatcac gaagtcgacg
     1801 tgggtgacgg tccccttcac ggggtggcgc tgcatctcac gggccagggt gaggtaggtc
     1861 tgcttcccgg ccttgagcga gagcagcgtg ttgctcccgg agtcgccgga gagggcgttg
     1921 cgcagctcac gggcctcgac cgcgaccgac accggttcgg tgccgtggcc gtagacggtg
     1981 cccgggatca ggccttcgcg ccgcagccgg cgggaggcac gcgtcccgac ggccctgccc
     2041 acctgggcct ccaagacgat ctcgggcatg gctggttctc cttggcgggg cgatcgggcg
     2101 tcgggcggcc gacgtcacgg cagcccgttc gggcgccgcc ggggtcggca ggtcggtcac
     2161 cagggtactc ggcgccggca gacccgagga cggccgctgg ggttcgggcg gcgacgccgg
     2221 agccgttgcc cggccggttc agacctggtt ggcgcccccg aagatctccg agac
//
LOCUS       DATGJT010000480         2290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_167642, whole genome shotgun sequence.
ACCESSION   DATGJT010000480 DATGJT010000000
VERSION     DATGJT010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167642"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VKX24_08235"
     CDS             <1..697
                     /locus_tag="VKX24_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08512.1"
                     /translation="HFIRDVDGNPGAVVTNGVSPPAPAPAQTVCAASGRLQLSSPGGN
                     AYDTTLTVVPPDAQDPQLDITQASFTVDQAHDALVVSIGGPSLSTTGPPDAIDGYTFY
                     ATWNYAGTTYFAAAAVDQPPNTPAVPGVLNAVPVPISPPTRTVTYGDGVMDSVTPTFA
                     HFDAGSFANGTFTITVPLGHVGNPSIGGAGPGPLLQEPFVFDTLPDGVLVPFAFDEAA
                     ADPPGLQLLLGGC"
     gene            complement(704..1651)
                     /locus_tag="VKX24_08240"
     CDS             complement(704..1651)
                     /locus_tag="VKX24_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016573478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ08513.1"
                     /translation="MSHGPDHAHDDRPLPPPRVVEVADKVFAYVQPDGTWWINNTGFV
                     VDGPVVVSVDTCATERRTRAYLDAVRARAGGVPQLVVNTHHHGDHTNGNGIVAGATII
                     GHRRCREEMLRNGILRPEGVFEPVEWGELTLAPPVVTFEERLDLHLGDRRLELHHVGI
                     AAHTTNDVVVWVPEERVLFTGDLAFNGGTPFVLMGSIAGTLLALDRLVEFDAEVIVPG
                     HGPPSGPEVLDTVGAYVRLVQEHAETAYKAGLSPLEAARQLELGSFAELTDSERLVGN
                     MHRAFAECAGARPGADIDLAAAFADMIAFNGGRPLRCRA"
     gene            complement(1701..1988)
                     /locus_tag="VKX24_08245"
     CDS             complement(1701..1988)
                     /locus_tag="VKX24_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08514.1"
                     /translation="MVPHPDAPWGDIEEFALACAPEAGRAELAHMASRARRAWTRYRQ
                     LPQGVEELRACLFFEQRRWHLFGAEPDGPARAYASALVLAIGIAGDCAEAG"
     gene            complement(1991..>2290)
                     /locus_tag="VKX24_08250"
     CDS             complement(1991..>2290)
                     /locus_tag="VKX24_08250"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLJ08515.1"
                     /translation="DRLLAEVSRAWQGHLRDTDVLARAGGDEFVLLLPSTGVSQALAV
                     LNRLGRSTAQAFSAGVALATPGCTVEDVLREADDACYQAKQRGGGRVVVSQATAA"
BASE COUNT          316 a          839 c          817 g          318 t
ORIGIN      
        1 gcacttcatc cgtgacgtgg acggcaaccc cggcgctgtc gtcacgaacg gcgtttcccc
       61 gccggcgccg gccccggcgc agacggtgtg cgccgcttcc ggccgcctgc agctgagctc
      121 gccgggcggc aacgcctacg acaccacgct gaccgtcgtt ccgccggacg cccaggatcc
      181 gcagctcgac atcacccagg cctcgttcac cgtcgaccag gcccacgatg cgctggtcgt
      241 cagcatcggc ggtcccagcc tgtccacgac agggccgccc gacgccatcg acggctacac
      301 gttctacgcc acctggaact acgccgggac cacctatttc gccgccgctg cggtcgacca
      361 accgccgaac acgcccgccg ttccgggagt gctcaacgcc gttccggtcc cgatctcgcc
      421 accgactcgg accgtgacct acggggacgg ggtgatggac agcgtcacgc cgaccttcgc
      481 ccacttcgac gccggttcgt tcgccaacgg gacgttcacg atcacggtgc cgctcggcca
      541 cgtgggcaac ccgtcgatcg gcggagccgg gcccgggccg ctgctgcagg agccgttcgt
      601 gttcgacacc ctgcccgacg gcgtgctcgt gcccttcgcc ttcgacgagg ccgccgcgga
      661 tcctcccggc ctgcagctgc tcctcggagg gtgctgacga cgctcaggcc cggcagcgca
      721 ggggcctgcc tccgttgaag gcgatcatgt cggcgaaggc agcggcgagg tcgatgtccg
      781 ccccgggccg ggcgccggcg cattcggcga aggcgcgatg catgttgccg accagccgct
      841 cggagtcggt cagctcggcg aacgatccca gctcgagctg gcgggcggcc tccaaggggg
      901 acagcccggc cttgtaggcg gtctcggcgt gctcctggac gaggcgcacg taggcgccga
      961 ccgtgtcgag gacctcgggc ccggacggcg gcccgtggcc gggcacgatc acctcggcgt
     1021 cgaactccac caaccggtcg agcgcgagca gcgtgccggc gatcgagccc atgaggacga
     1081 acggcgtgcc tccgttgaac gccaggtccc cggtgaacag gacccgctcc tcgggcaccc
     1141 agaccacgac gtcgttggtg gtgtgggcgg cgatgcccac gtggtggagc tccaggcggc
     1201 ggtccccgag gtggaggtcc aaccgctcct cgaaggtgac cacgggcggc gccagcgtga
     1261 gctcccccca ctccaccggc tcgaagacgc cctcgggccg caggatgccg ttgcggagca
     1321 tctcctctcg gcagcgccgg tgcccgatga tcgtggcccc ggcgacgatc ccgttgccgt
     1381 tggtgtggtc gccgtggtgg tgggtgttga cgaccagctg agggacgccc ccggcccggg
     1441 cgcgcacggc gtcgagatag gcgcgggtgc gacgctccgt cgcgcacgtg tcgaccgaga
     1501 ccaccaccgg cccgtcgacg acgaacccgg tgttgttgat ccaccaggtg ccgtcgggct
     1561 gcacgtaggc gaacaccttg tcggccacct cgacgaccct cgggggagga agcggacggt
     1621 cgtcgtgggc gtggtcgggg ccgtggctca cgcggtcgtt gtagcaccga gcgccgtcct
     1681 tggtgcggtc gggacctcgc tcagccggcc tcggcgcagt cgccggcgat gccgatggcg
     1741 agcacgagcg ccgaggcata ggccctcgcc gggccgtcgg gctcggcgcc gaagaggtgc
     1801 cagcggcgct gctcgaagaa caggcaggcc cgcagctcct ccacgccttg gggcagctgc
     1861 cggtagcggg tccacgcccg tcgtgccctg ctggccatgt gggcgagctc ggcacgcccc
     1921 gcctcgggcg cgcacgccag ggcgaactcc tcgatgtcgc cccaaggcgc atcggggtga
     1981 ggtaccacgc tcaggccgcc gtcgcctggg agaccacgac acgcccgccg ccgcgctgct
     2041 tggcctggta gcaggcatcg tcggcttcgc gcagcacgtc ttcgacggtg caaccgggtg
     2101 tggccagggc cactccggcc gagaaggcct gcgcggtgga gcgccccagc cggttgagga
     2161 cggcaagggc ctggctcacg ccggtggagg gaaggagcag cacgaactcg tcgccaccgg
     2221 cgcgggcgag cacgtcggtg tcccgcaggt gtccttgcca ggcccggctc acctcggcga
     2281 ggaggcggtc
//
LOCUS       DATGJT010000481         3058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1308695, whole genome shotgun sequence.
ACCESSION   DATGJT010000481 DATGJT010000000
VERSION     DATGJT010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308695"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..763
                     /locus_tag="VKX24_08255"
     CDS             <1..763
                     /locus_tag="VKX24_08255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08516.1"
                     /translation="LAGSATAVASVAVLVAAGVVGSGGGGRPAVSHKQALQAGAAPIS
                     PPSVPASAAADAVTPPAGAASTSVVGAAGPPATARPKPAPTVDTLLGALPLTPPAPGP
                     ASGAPAAAVGPSAPAGAAPAPPAPSVPAPVTPYTAHGQLLAPDLLGPLGLGLTTRSSA
                     PGSCGPSATQGLDAWVFELPAGAPGAGAPVKVSGSDLLGLHNLAATFVGADCTVLGQL
                     DTDAADEAGVLPAGTKYVVVSDRSGLATAVTLTVG"
     gene            970..2871
                     /gene="gyrB"
                     /locus_tag="VKX24_08260"
     CDS             970..2871
                     /gene="gyrB"
                     /locus_tag="VKX24_08260"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012886815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HLJ08517.1"
                     /translation="MAYDAKDITVLKGLEPVRERPGMYIGSTGPSGLHHLVYEVVDNA
                     VDEAMAGHANRIDVTLLKDGGCRVVDNGRGIPVDEHPEYPGISAAEIVLTTLHAGGKF
                     GGEGYKISGGLHGVGVSVVNALSSRLELEVNRDGGKFVQAFVDGGRPEGPLERVSGTR
                     KKGTSVTFWPDPTVFEETEFRAQTLLERLREMAFLTKGLEIVFRDERPDPALEVTYKY
                     TGGIKNFVEHLNATKEALHKRIIFFEEAQDSSEVEVAMQWNTGYHEGLHSFANNIATT
                     EGGMHEEGFRKALTNVVNKYAREKGLLKEKDDAFAGEDIREGLTAIISVKLRNPQFEG
                     QTKTKLGNTDMRSLVEKATNARLRDWFEENPSEAKQIVSKVIQAARARMAARQARDLT
                     RRKSLLESASMPGKLADCSSRDPRQSELFIVEGDSAGGSAKQARDREFQAILPIRGKI
                     LNVERARIDRMLKNEEIQALITAIGAGIADEFNLDNARYHKIVLLTDADVDGAHIRTL
                     LLTFFYRQMADLVKMGYVYIAQPPLYSAVLGKEKTYLKDDHALQAFLGQHEGRKPEIS
                     RFKGLGGMNYDELWATTMDPGNRSLLQVQVEDAAIADDIISRLQGDDVDARRTFIQEN
                     ANDVRFLDF"
BASE COUNT          496 a         1116 c         1039 g          407 t
ORIGIN      
        1 tctggccggt tcggcgacgg ccgtggccag cgtcgccgtc ctggtggcgg ccggggtcgt
       61 cggctcgggc gggggcgggc gccccgccgt cagccacaag caggcgctgc aggccggggc
      121 cgccccaatc agcccgccca gcgtcccggc gtccgctgcc gctgacgcgg tgacgccacc
      181 ggccggcgcc gcctcgacgt ccgtcgtcgg tgcggcgggg cctccggcca ccgcccgccc
      241 gaagcccgcg ccgacggtcg acacgctcct cggggcgctg ccgttgacgc cgccggcgcc
      301 cgggccggcg tcgggtgccc ccgccgccgc cgtgggtccc tccgccccgg ccggcgctgc
      361 gcccgcgccg cccgcgccgt ccgtcccggc gccggtgacg ccgtacaccg cccacggcca
      421 actcctcgcc cccgacctcc tcggcccgct cggcctcggc ctgacgaccc ggagcagtgc
      481 gccggggagt tgcggcccgt ccgccacgca ggggctcgac gcctgggtct tcgagctgcc
      541 ggccggcgcc cccggggccg gcgcgccggt caaggtttcc ggcagcgacc tcctcggcct
      601 ccacaacctc gccgcgacct tcgtcggcgc cgactgcacg gtcctggggc agctggatac
      661 cgatgcggcc gacgaggccg gagtgctccc cgccggcacg aaatacgtcg tcgtctccga
      721 ccgcagcggg ctcgccacgg ccgtcacgtt gaccgtcggc tgaccgccga gcggggctcc
      781 ccgtcccgcc ccgtcgccgg cccgcgaaac cggccggaaa actcgtccga cggcggccga
      841 aacgtcgctt tcggggaccg atcaggaccc ccgttctggt aagatgacaa cattggattt
      901 cggggctctg accagcggtt tcccccgagc tgaggccccg caccccggtt ccgaacggaa
      961 ggttcgcgcg tggcgtacga cgccaaggac attacggtcc tcaagggcct cgagcccgtc
     1021 cgggaacgcc ccgggatgta catcggatcc accggtccgt cggggctcca ccacctggtc
     1081 tacgaggtgg tcgacaacgc cgtcgacgag gcgatggccg gccacgccaa ccgcatcgac
     1141 gtgacgctgc tgaaggacgg cggctgccgc gtcgtcgaca acggccgggg catccccgtc
     1201 gacgaacacc ccgagtaccc ggggatctcg gcggccgaga tcgtgctcac gacgctccac
     1261 gccggcggca agttcggcgg cgagggctac aagatctccg gcggcctcca cggtgtcggg
     1321 gtgtcggtcg tcaacgccct ctccagccgg ctcgagctcg aggtcaaccg cgacggcggc
     1381 aagttcgtcc aggccttcgt cgacggcggc cggcccgagg gcccgctgga gcgcgtctcg
     1441 gggacccgca agaagggcac gtcggtcacg ttctggcccg accccaccgt cttcgaggag
     1501 accgagttcc gggcccagac gctgctggag cggctccggg agatggcctt cctcaccaag
     1561 gggctcgaga tcgtcttccg ggacgagcgg cccgacccgg ccctcgaggt cacctacaag
     1621 tacaccggtg ggatcaagaa cttcgtggag cacctgaacg ccacgaagga ggcgctgcac
     1681 aagcgcatca tcttcttcga ggaggcgcag gacagctccg aggtcgaggt ggccatgcag
     1741 tggaacaccg gctaccacga gggactgcac agcttcgcca acaacatcgc caccaccgag
     1801 ggcggcatgc acgaggaggg cttccgcaag gcccttacca acgtcgtcaa caagtacgcc
     1861 cgggagaagg gcctcctcaa ggagaaggac gacgccttcg ccggagagga catccgggag
     1921 ggcctcacgg ccatcatctc ggtcaagctc cgcaacccgc agttcgaggg ccagacgaag
     1981 acgaagctcg gcaacaccga catgcggtcg ctggtggaga aggccaccaa cgcccgcctg
     2041 cgggactggt tcgaggagaa cccgagcgag gccaagcaga tcgtttcgaa ggtcatccag
     2101 gccgcccggg cccgcatggc cgcccgccag gcccgcgacc tgacccggcg aaagtcgctg
     2161 ctggagtcgg cgtcgatgcc gggcaagctc gccgactgct cgtcgcggga tccccgccag
     2221 tccgagctgt tcatcgtcga gggcgactcg gccggcggct cggccaagca ggcgcgggac
     2281 cgggagttcc aggcgatcct gccgatccgg gggaagatcc tcaacgtcga gcgggcccgg
     2341 atcgaccgga tgctgaagaa cgaggagatc caggcgctga tcaccgccat cggagcgggc
     2401 atcgccgacg agttcaacct cgacaacgcc cggtaccaca agattgtcct gctgaccgac
     2461 gccgacgtcg acggcgccca catccggacg ctgctgctca cgttcttcta ccggcagatg
     2521 gcggatctgg tgaagatggg ctacgtctac atcgcccagc cgccgctgta ctcggccgtc
     2581 ctcggcaagg agaagaccta cctgaaggac gaccacgccc tacaggcctt cctcggccag
     2641 cacgaggggc gcaagccgga gatcagccgg ttcaagggcc tcggcgggat gaactacgac
     2701 gagctgtggg cgacgacgat ggacccgggc aaccggtcat tgctgcaggt ccaggtggag
     2761 gacgccgcca tcgccgacga catcatctcc cggctccagg gcgacgacgt cgacgcccgg
     2821 cgcacgttca tccaggagaa cgccaacgac gtgcggttcc tggacttctg attttttgta
     2881 gttcgcggta gcaccacaac cacagggagg gcggccgagg tgcctgacgg ccagcagagc
     2941 ctgggagcga tcgagccgat cgagatccag gaggagatgt cgcggtcctt catggactac
     3001 gcgatgtccg tcatcgtgtc ccgggccctg cccgacgccc gcgacggtct gaagccgg
//
LOCUS       DATGJT010000482         3247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_581648, whole genome shotgun sequence.
ACCESSION   DATGJT010000482 DATGJT010000000
VERSION     DATGJT010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_581648"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VKX24_08265"
     CDS             <1..246
                     /locus_tag="VKX24_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08518.1"
                     /translation="AYATAGVGAGGGGGAAARRAAAAAAAAAGSGAAPAPAPAERDEG
                     EAAEKPAPAAARQGPRPVPTRRPGGAAPRPRQKRRKR"
     gene            293..823
                     /locus_tag="VKX24_08270"
     CDS             293..823
                     /locus_tag="VKX24_08270"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011419809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HLJ08519.1"
                     /translation="MERDAARLKDLIRDIPDFPKPGVVFKDITPLLADPEGFALVIDS
                     IADRFVGRGIRKVVGIEARGFIVAAPVAHRLGAGFVPVRKVGKLPWQVEAEAYELEYG
                     TGLLELHSDAVDLDEQVLVVDDVLATGGTAAATVRLIERLGARVAGLGFVIELGFLDG
                     RRQLPEREIVSLLHYE"
     gene            980..3079
                     /locus_tag="VKX24_08275"
     CDS             980..3079
                     /locus_tag="VKX24_08275"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HLJ08520.1"
                     /translation="MERAFEVARKAHQDQVRRSGDPYISHPLSVARILAGLGLDDVTI
                     AAALLHDAVEDTDVTLADISKDFGPDVAAIVDGVTKLDRLQFDTKEAQQAATLRKMLV
                     AMAKDIRVLLIKLADRLHNMRTIAALPEGKQRRIAQETLDIYAPLAHRLGIQDVKWQL
                     EDLSFAVLYPKRYAEIEQMVAVRAPERDFQLREVLEAVSNRLAVLRIRAEVFGRPKHY
                     FSIYEKMVVKGKEFDEVQDLVAIRVVVDSVKDCYGALGSIHALWKPIQGRFKDYIAMP
                     KFNLYQSLHTTVVGPQGKPVEVQIRTKEMHQRAEYGIAAHWGYKENRSPQEDLGWLQR
                     LVDWQQETADPTEFMEVLKVDLEQDEVFVFTPKGDVVTLPSGATAVDFAYTIHTEVGH
                     RTIGARVNGRLVPLDSALASGDSVEIFTSKVAGAGPSRDWLRFVQTPRARSKIRQWFS
                     RERREDAIETGREELVKSLRKEGLPVQKLAGSSILAKVAVAMNYADLEALHAAIGEGH
                     VSGKAVAQRIQREMRGGEEQISTTATRPRRKPRGPHSKIGVHVEGLDDVLVRLSRCCT
                     PVPGDEIIGFVTRGRGVSVHRADCANAAGLTSQSSRLIEVEWDGESSGSWVVSIQIEA
                     LDRSKLLRDVAQVLADHHVDIISCSTHTTADRVATLHFEFELSDPGHLDSILAAVRRV
                     DSIYEVSRVLPGRSPVH"
BASE COUNT          486 a         1188 c         1127 g          446 t
ORIGIN      
        1 gcctacgcca cggccggcgt cggcgccggt gggggcggtg gggcggcagc ccgccgagcc
       61 gccgcagccg cagccgctgc cgccgggagc ggcgccgccc ccgcgccggc gcccgccgag
      121 cgcgacgagg gcgaggcggc cgagaaaccg gcgccggccg ccgcccggca ggggccccgg
      181 cccgtgccga cccgccggcc cggcggagcc gcgccccggc cccgccagaa gcgtcggaag
      241 cgctgaacgc ccggcgtccc ggccgatgcg ggtcggccgg tacgcttgat gtgtggagcg
      301 tgacgcggcg cgtctcaaag atctcatccg ggacatcccc gacttcccca agccgggggt
      361 cgtcttcaag gacatcacgc cgctcctcgc cgacccggag ggcttcgccc tcgtcatcga
      421 ctccatcgcc gaccgcttcg tcggccgggg catccgcaag gtcgtcggca tcgaggcccg
      481 ggggttcatc gtcgccgctc cggtggccca ccggctcggg gccgggttcg tgcccgtccg
      541 caaggtcggg aagctgccgt ggcaggtcga ggccgaggcc tacgagctgg agtacggcac
      601 cgggctgctc gagctccaca gcgacgccgt cgatctcgac gagcaggtcc tggtggtcga
      661 cgacgtcctc gccaccgggg ggacggcggc ggccaccgtc cgcctgatcg agcggctcgg
      721 cgccagggtc gccgggctgg gcttcgtgat cgagctgggc ttcctcgacg ggcggcggca
      781 actgccggag cgcgagatcg tttcgctgct ccattacgag taggacggag gccgcttgag
      841 caccgtcgac cggcgcatcg acctgcgggt ggagggccgc cgggccgtcg tgccctggcg
      901 ccggcactac gccagctccg aggtcgcccc gctcctcgcc gcctacctcg agcgccaccc
      961 gaagggggag accggccgga tcgagcgggc gttcgaggtg gcccgcaagg cccaccagga
     1021 ccaggtgcgc cgctccggcg acccctacat ctcccacccg ctgtcggtgg cccgcatcct
     1081 cgccggcctc ggcctcgacg acgtcacgat cgccgccgcc ctgctccacg acgcggtgga
     1141 ggacaccgac gtcaccctgg ccgacatctc caaggacttc gggcccgacg tggcggccat
     1201 cgtcgacggc gtgaccaagc tggaccggct ccagttcgac accaaggagg cccagcaggc
     1261 cgccaccctg cgcaagatgc tggtggccat ggccaaggac atcagggtcc tcctgatcaa
     1321 gctggccgac cggctccaca acatgcgcac gatcgccgcc ctccccgagg gcaagcagcg
     1381 ccgcatcgcc caggagacgc tcgacatcta cgccccgctg gcccaccgcc tcggcatcca
     1441 ggacgtcaag tggcagctgg aggatctcag cttcgccgtc ctctacccga agcgctatgc
     1501 cgagatcgag cagatggtgg ccgtccgggc ccccgagcgg gacttccagc tccgggaagt
     1561 gctcgaagcg gtgtcgaacc gcctggccgt gctgcggatc cgggccgagg tcttcggacg
     1621 gccgaagcac tacttctcga tctacgagaa gatggtcgtg aagggcaagg agttcgacga
     1681 ggtgcaggac ctggtggcga tccgggtcgt cgtcgactcg gtgaaggact gctacggcgc
     1741 cctcggttcc atccacgccc tgtggaagcc gatccagggg cgcttcaagg actacatcgc
     1801 catgcccaag ttcaacctct accagtcgct gcacacgacg gtggtggggc cccagggcaa
     1861 gccggtcgag gtccagatcc ggaccaagga gatgcaccag cgggcggagt acggcatcgc
     1921 cgcccactgg ggctacaagg agaaccgctc cccccaggag gacctcggct ggctccagcg
     1981 cctcgtcgac tggcagcagg agaccgccga ccccacggag ttcatggagg tcctgaaggt
     2041 cgacctcgag caggacgagg tcttcgtctt cacccccaag ggcgacgtcg tgacgctgcc
     2101 gtccggggcg acggcggtcg acttcgccta caccatccac accgaggtcg ggcaccgcac
     2161 gatcggcgcc cgggtcaacg ggcggctggt gccgctggac tcggcgctgg cctcgggcga
     2221 ctctgtcgag atcttcacct ccaaggtcgc cggcgccggt ccgtcgcggg actggctgcg
     2281 cttcgtccag acgccccggg cccggtccaa gatccggcag tggttctccc gggagcgccg
     2341 ggaggacgcc atcgagaccg gccgggagga gctggtcaag tcgctgcgca aggaagggct
     2401 gcccgtccag aagctggccg gcagctcgat cctggccaag gtggccgtgg ccatgaacta
     2461 cgccgacctg gaggcgctcc acgccgccat cggcgagggc cacgtctcgg gcaaggcggt
     2521 ggcccagcgg atccagcggg agatgcgggg cggcgaggag cagatctcca ccaccgccac
     2581 ccgcccccgg cgcaagcccc gggggccgca ctccaagatc ggcgtccacg tcgaagggct
     2641 cgacgacgtg ctggtgcggc tgtcgcgctg ctgcacgccg gtgcccggcg acgagatcat
     2701 cggcttcgtc acccggggcc ggggcgtgtc ggtccaccgc gccgactgcg ccaacgccgc
     2761 tggcctcacc agccagagct cccggctgat cgaggtggag tgggacggcg agagctcggg
     2821 cagctgggtc gtctcgatcc agatcgaggc cctcgaccgg tcgaagctcc tgcgcgacgt
     2881 cgcccaggtc ctcgccgacc accacgtcga catcatctcc tgctcgaccc acaccaccgc
     2941 cgaccgggtg gccacgctcc acttcgagtt cgaactgtcc gaccccgggc atctcgactc
     3001 gatcctcgcc gccgtgcggc gcgtcgactc gatctacgag gtttcgcgcg ttttgcccgg
     3061 taggtccccc gtccactgag gggcatttag cccgctcttg aaggagcctt aacgccgctg
     3121 tcgaagtgag gcggcgcagt ggcgtttacc tgcacggaaa gcacccggcc gggggtgtgg
     3181 cgcccccggc cgtgttcact caagcgggct ccgggtccgg tcgatcacca gagcatgggt
     3241 gaactct
//
LOCUS       DATGJT010000483         2216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1412914, whole genome shotgun sequence.
ACCESSION   DATGJT010000483 DATGJT010000000
VERSION     DATGJT010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412914"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VKX24_08280"
     CDS             <1..299
                     /locus_tag="VKX24_08280"
                     /inference="COORDINATES: protein motif:HMM:NF022044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HLJ08521.1"
                     /translation="TGRDGRPVLVVATDGDQLTVPYDAANEAQFRQLCAALTGVAEPP
                     ATPTPPPTPTATSPPATASPGTPSPDTKTCPMCAEEVKAAAVLCRFCGHRFDQQ"
     gene            complement(642..1325)
                     /locus_tag="VKX24_08285"
     CDS             complement(642..1325)
                     /locus_tag="VKX24_08285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08522.1"
                     /translation="MEEGWFERLTGIMSRMAGGDATALEALYVGFGDPIRRRVRRELE
                     RLGVTPTDPADVDGLTLDVCTDLFQRAGSWDPSHGAAPWTWARLRIRALVSAHVGQFA
                     DPLPDTGLADADLPVVPPAAAADDGDDNVLCALGRLAAARSDVRLLHEALERVSRPAQ
                     QEILFEVKMQAGQGDPSPAATVARAYALRPEAVRQTCKRVLDRVSHLAATEPRFAPLA
                     ELPLLRRAS"
     gene            1674..>2216
                     /locus_tag="VKX24_08290"
     CDS             1674..>2216
                     /locus_tag="VKX24_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014739565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HLJ08523.1"
                     /translation="MDTHRDINVAAVVDHTGRILGTAGFPTTLAGHRQLLRWLRRHGR
                     LTLVGVEGTGAWGAGLARFLTREGIPVVEVDRPNRQHRRRRGKSDPADAEAAARAALN
                     GEAAGTPKTRTGKVEAIRALRVARRSALKARTQAANQLHSLVVTAPDDLRSQLGGLRL
                     DDLAATAQRFRPGPPTTPAAA"
BASE COUNT          307 a          789 c          813 g          307 t
ORIGIN      
        1 ccaccggccg cgacggccgg ccggtcctcg tcgtggcgac cgacggcgat cagctcaccg
       61 tcccctacga cgccgccaac gaggcgcagt tccgccaact gtgcgccgcc ctcaccggcg
      121 tggccgaacc accggccacc ccgacgccac cgccgacccc gacggcgacg tctccgcccg
      181 cgacggcttc gcccgggacc ccgtctccgg acacgaagac ctgcccgatg tgcgccgagg
      241 aggtcaaggc cgccgccgtc ctgtgccggt tctgcggcca ccgcttcgac cagcagtgag
      301 ggctgagttc ggcaaatgga tgagacagca tgggggtcgt ccttcggaag gccagccatg
      361 ctgagcgccc gagagccgat acgcgggcgg tccgcagtca gccgccccga gccggagacc
      421 gaccgggacc ggcacgtcgg agcgattgga tggaccggcg tgcctgagga acacctgtcg
      481 ttcctgaagc acgccggttg cccgccccgc ccggcagccg accgattcgg cgttcctgag
      541 gaacacctgt cgttcctcgg gaacgccggt tgtcaggccg acttggtgag ggctgagggc
      601 ggcgtccccc acagcgggcg gtgcgtccga ggccgcccgg gtcagctggc ccggcgcagg
      661 agcggcagct cggccagcgg agcgaagcgg ggttcggtgg ccgccaggtg cgagacccgg
      721 tcgaggaccc gcttgcaggt ctggcggacg gcttcgggcc gcagggcgta ggcccgggcc
      781 acggtcgcgg cgggggacgg gtcgccctgg ccggcctgca tcttcacctc gaagaggatc
      841 tcctgctggg ccgggcggct gacccgctca agagcctcgt ggaggaggcg gacgtcgctg
      901 cgggcggcgg ccagccgccc gagggcgcag aggacgttgt cgtccccgtc gtcggcggcg
      961 gcggccgggg ggacgacggg caggtcggcg tcggcgaggc cggtgtcggg cagcgggtcg
     1021 gcgaactggc cgacgtgggc cgacaccagg gcccggatgc gcagcctggc ccacgtccag
     1081 ggggcggcgc cgtgggacgg gtcccacgat ccggcccgct ggaacaggtc ggtgcagacg
     1141 tcgagggtga gcccgtcgac gtcggcgggg tcggtcggcg tgacgccgag gcgctcgagc
     1201 tcccggcgga cgcggcgccg gatcgggtcg ccgaagccca cgtacagcgc ttccagggcg
     1261 gtggcgtcgc cgcccgccat ccggctcatg atcccggtca accgttcgaa ccagccctct
     1321 tccacgtggg ttccttctct ctcgtttcgc tcgaaaccca ttgtgcggaa agggtctgac
     1381 atctaagagg tccaccggct cgagggcggg ggtcgaaagg atgtggtcgg tgtttgggaa
     1441 gcctggtctg acccggggtc tgactggctt cgtgcctgtt tcttgatctg tcggccaggc
     1501 gccctgagca ccgatcgcgg caccagccgg tccggacgga cgtgacctca taggagcttg
     1561 gcgttccctg tagatgtctt gtccgccgtc ccggccggcg cgtgccatcc actcgagcat
     1621 ggagggatga cgtgaccaga ctggcagagc cacccctgac cgtcacgggt ggggtggata
     1681 cccaccgcga catcaacgtg gccgcggtgg tggaccatac cggtcgaatt ctcgggacgg
     1741 ctgggtttcc gaccacgctc gccggtcacc ggcagttgct ccggtggctg cggcgtcacg
     1801 gccggttgac gttggttggc gtcgagggga cgggggcatg gggggccggc ctggctcgct
     1861 tcctgaccag ggagggcatc ccggtggttg aggtcgaccg ccccaaccgc cagcaccgcc
     1921 gtcgccgagg caagtccgat ccggctgacg ctgaagccgc cgcccgagca gccctcaacg
     1981 gcgaggcggc tggcaccccc aagactcgga cgggcaaggt cgaggcgatc cgggccctgc
     2041 gggtggcccg ccggtcggcc ctcaaggccc gaacccaggc cgccaaccag ctccactccc
     2101 tggtggtcac cgcccccgac gacctccgat cccaactcgg tggcctccgt ctggacgacc
     2161 tcgccgccac cgcccagcgc ttcaggccgg gaccgccgac gaccccggcc gcagcc
//
LOCUS       DATGJT010000484         2304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_271829, whole genome shotgun sequence.
ACCESSION   DATGJT010000484 DATGJT010000000
VERSION     DATGJT010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271829"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..438
                     /locus_tag="VKX24_08295"
     CDS             34..438
                     /locus_tag="VKX24_08295"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HLJ08524.1"
                     /translation="MNGERGSVTLFIVLLATAILGLGGVVNDAGAALVSARRVTDIAE
                     TAARAGVQAGTAPDAAGAARLDPQQARQAAANFLAGQGLRGDVRADAGRVEVTVRLQQ
                     PTTLLRAVGITHLDVSGTGVARPLLGVTEAQR"
     gene            435..>2304
                     /locus_tag="VKX24_08300"
     CDS             435..>2304
                     /locus_tag="VKX24_08300"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HLJ08525.1"
                     /translation="MTLRRRGSSLATFLGSMALLAGLPVLLAAVAGWPLPRQLPRWGE
                     VGQALADGWRPEGTTLLHCVAILAWVAWAQLAANTVLELAAQLRNRPSGAVTLPLSGW
                     SRPFAIRFATAVVALIGTIGPRPLPAVALPVPAVVTTSTAMAVSVPAGNDSIVPTSAE
                     PMEASPLAPPTAAVKPEPPFDVQLHGAVAESEQLVSPGDSLWRLAERHLGDPLRWREL
                     WRLNQGRLQPDGRRLGDPDLLRPGWRLTIPTMPTWAAEGASPTRSASIASTTAGPPAA
                     TLPPDALGAGHPTVEFRHADRDETGSPTTTQTRPQPAAESPPSSARSESRSASATAQP
                     AQPPWAASKPQSLAPSDSKRDDGTPSASPASAQADGQPASNRISTPDRFQSPPANRQA
                     EHSPFSAGVPYLVAGAVVGYLAALLTLRERWRRPGHRFPKPTPQLTDVERRVRGVADP
                     EAPRLVDLALRHLAAALSAAPERSVPGVLAVRCGPSGVEVLLDEPVASAPGQFEVGDD
                     GHSWRLDHRITGDELAALAGDQPPPFPALVSVGTTSDGPVLIDLGAAGSVGLAGDPDR
                     VKATFQSIALELATTPWAASVDVVLVGEDRRLACLERVRVVDPTGALDGLRSCARPE"
BASE COUNT          318 a          914 c          740 g          332 t
ORIGIN      
        1 cgttcaaccg ctcgatccct acaaggcgtt ccggtgaacg gcgagcgggg ctcggtgacc
       61 ctgttcatcg tgctgctggc cacggccatt ctcggcctcg gcggcgtcgt caacgacgcc
      121 ggcgcggcgc tcgtgtcggc ccgacgtgtg accgacatcg ccgagacggc cgcccgggcc
      181 ggagtccagg ccggcaccgc gcccgacgcg gccggagccg cccgactcga tccgcaacaa
      241 gcccgccagg cagcagcgaa cttcctggcg ggacagggcc tgcggggcga cgtccgcgcc
      301 gacgccggcc gcgtggaagt caccgtgcgc ctgcagcaac cgacaaccct gctccgagcc
      361 gtgggcatca cccatctcga cgtctcaggg accggcgtcg cccgcccgct gctcggcgtg
      421 acggaggcac aacgatgacc ctgcgcagaa gaggcagcag cctggccacc ttcctcggct
      481 cgatggccct cctcgccggc ctgcccgtgc tcctggcggc cgtcgccggg tggccgctgc
      541 cccggcagtt gccccgctgg ggcgaagtcg gccaggcgct cgccgacggc tggcggccgg
      601 aaggcacaac gctgctccac tgcgtcgcca tcctcgcctg ggtcgcctgg gcccagctgg
      661 ccgccaacac ggtgctcgaa ctcgccgccc agctgcgcaa ccgtccctcc ggggcggtga
      721 cgttgcccct gtccgggtgg agccgcccgt tcgccattcg attcgccacc gcggtggtcg
      781 ccctcatcgg caccatcggt ccacgtccgc tccctgccgt cgcccttccg gtcccggctg
      841 tagtcaccac gtcgactgcc atggcagtgt ccgtcccggc ggggaatgac tcgatcgtgc
      901 cgacatcagc ggagccgatg gaagcatcgc cgctggcgcc acccaccgcg gccgtcaaac
      961 ccgagcctcc gttcgacgtc caactgcatg gggctgtggc cgagtcggag caactggtca
     1021 gccccgggga ttctctctgg cgtctcgccg agcggcatct cggcgacccg ctgcggtggc
     1081 gggaactctg gcggctgaac cagggccggc tccaacctga cggccgccgg ctcggtgacc
     1141 ccgatctctt gcgtcccggc tggcgcctca cgatcccgac catgccgacg tgggcagctg
     1201 aaggcgcatc gccgacccga tcagcctcga tcgcctcaac aacggccggg ccaccagccg
     1261 cgacgcttcc ccccgacgcg ctgggtgccg gtcatccaac cgtcgagttc cgccacgcgg
     1321 accgagatga gactggatcc ccgacgacga cacagaccag gccacagcca gcagcggaat
     1381 ctcccccgtc ctcggcgcgt tccgagtccc gctcggcgtc ggcgaccgca caacccgccc
     1441 aacctccctg ggcagcttcg aaaccgcagt ccttggcacc gtccgactcc aagcgggacg
     1501 acggcactcc cagcgcctcg cctgcaagcg cccaagccga cggccagccg gcttcaaaca
     1561 gaatctccac gccggaccgg tttcaatcgc ccccagccaa ccgccaggcc gaacattctc
     1621 ccttcagtgc cggtgttccc tatctcgtcg ccggtgccgt ggtcggctat ctcgccgcgc
     1681 tcctgaccct ccgggaacgc tggcggcgcc cagggcaccg gttcccgaag ccaacgccgc
     1741 agttgaccga cgtcgaacgc cgggtccggg gcgtcgccga ccccgaggca ccgaggctcg
     1801 tcgacctcgc cctgcgccac ctcgccgccg cgctttcggc cgcaccggaa cggtcggtgc
     1861 ccggcgttct ggccgtccgg tgcgggccat ccggagtcga agtgttgctc gacgagccgg
     1921 tggccagcgc acccggccaa ttcgaggtgg gcgacgacgg ccattcctgg cggctcgatc
     1981 accggatcac cggcgacgag ctcgccgccc tggcgggaga tcagcctcct ccgttccccg
     2041 cgctcgtctc cgtcggcacg acgtccgacg gcccggtcct gatcgacctt ggcgccgccg
     2101 gctccgtcgg gctcgccgga gaccccgacc gggtcaaggc cacgttccaa tccatcgcgc
     2161 tcgagctggc cacgacaccg tgggccgcaa gcgtcgacgt cgtcctcgtg ggggaggacc
     2221 gtcggcttgc ctgcctggaa cgggtccggg tggtggatcc gaccggtgcc ctcgacggcc
     2281 tccgttcatg tgcccgtccc gaag
//
LOCUS       DATGJT010000485         2356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_168111, whole genome shotgun sequence.
ACCESSION   DATGJT010000485 DATGJT010000000
VERSION     DATGJT010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168111"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VKX24_08305"
     CDS             complement(<1..462)
                     /locus_tag="VKX24_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08526.1"
                     /translation="MAASSLPASAGRTVPYTPPPAPTAPDPMPALPAGPLVPAQGALF
                     GMHTTPDQSAKDPSGMGITQREQQLGRTMDVDNHYYGCIPTSAAPMPSFRETWDIQQG
                     RIPLVSWGRQCDKAQVASGALDAQLGKIADAFKALGAPFFLRWSWEGDGNQN"
     gene            750..>2356
                     /locus_tag="VKX24_08310"
     CDS             750..>2356
                     /locus_tag="VKX24_08310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08527.1"
                     /translation="MRRSWTAIAARVRRPGRRPLLAGAVAVLAVASSFAPPASPLAQT
                     ATASATVPYVNPPAPTPPDPMPPRPTGRLVPAQGALFGIHTVPDSPTAKTAADMGITK
                     READTGRTLDIDNHYYASFDSAAPLNGSKPTLPGWREQWDIQNGRIPMISWGGADVID
                     IVNGKYDAAIDAAATRLQALGAPFFLRWFWEPDGNRPSKSGKSHTPADYIKAWRYIHD
                     RFAKDGNTNAVWVWCPVSLDFYPPSGQTDPNLAPDHAINPLGAQPYYPGDDVVDWMCA
                     DGYNWAPNLAGARYEPFQELFQAFYNWSVPHNKPLMVGETGVQENNPGDKANWLKAAH
                     LALTQHYPNIVAFDYFDTQNANGLANNWWLESSPEAYQAWKDMAADPYFNHRDTLPPP
                     YGTSAAVPPPPGCGCPTGQPSGPPVVTPPGPQPNTGDPGDHTAAVPQGYWMLGADSKV
                     YPFGQARSFGDGPAGVAAVDLEPTPSGQGYWLLSADGRVTPMGDATPLGNADMTRLAP
                     GEQVTSLSATPSGKGYWIFTSRGRALA"
BASE COUNT          353 a          903 c          789 g          311 t
ORIGIN      
        1 gttctggttc ccgtcaccct cccacgacca gcggaggaag aacggcgccc cgagggcctt
       61 gaaggcgtcg gcgatcttgc cgagctgggc gtcgagggcg ccgctggcca cctgggcctt
      121 gtcgcattgc cggccccagg agacgagcgg gatgcgaccc tgctggatgt cccacgtctc
      181 ccggaagctc ggcatcgggg ccgccgaagt tgggatgcag ccgtagtagt ggttgtcgac
      241 gtccatcgtc cggccgagct gctgctcgcg ctgggtgatg cccatgccgc tcgggtcctt
      301 ggccgactgg tcgggcgtcg tgtgcatccc gaacagcgcg ccctgggccg gcaccagcgg
      361 cccggccggc agcgccggca tggggtcggg cgcggtgggc gccggcggcg gcgtgtacgg
      421 caccgtccgg ccggcgctgg ccggcaggga ggaggcggcc attgcgagcg acgccgcgac
      481 gagcgcggcc gtcccgatga ttccccagcg tcgtttcatg ggtgccttcg gtgagggggg
      541 cgtcgcgcac cacgatcggg cgcgaccggt gagcaattga tgaacacccc tatgaacgaa
      601 gctgcggccg aggtatggcg cggacgtcct gaaggcagtc tgacttcgac ctgaattctc
      661 tctgaatggg gcaaaagagg ggcgcggcgc tgcgccggtg aaaacgctcg tgggcctctc
      721 cgcgccctca ccccccggag gatgtcgtcg tgcgcagatc ctggaccgcc atcgccgctc
      781 gtgtacgccg cccgggtcgc cgcccgctcc tggccggcgc cgtggccgtc ctggcggtgg
      841 cgtcctcgtt cgctccgccg gcgtcgccgc tggcgcagac ggcgaccgcc tcggcgaccg
      901 tcccctacgt caatccgccg gcgccgacgc cgcccgaccc aatgccgccc cgtccgaccg
      961 gccggctggt gccggcgcag ggcgccctct tcggcatcca caccgtcccc gactcgccca
     1021 cggccaagac cgccgccgac atggggatca ccaagcggga ggccgacacg ggccgcacgc
     1081 tggacatcga caaccactac tacgccagct tcgactccgc cgcgccgctc aacggcagca
     1141 agccaaccct gccgggctgg cgggagcagt gggacatcca gaacggccgc atccccatga
     1201 tctcctgggg cggcgccgac gtcatcgaca tcgtcaacgg caagtacgac gccgccatcg
     1261 acgccgccgc cacccggctg caggccctcg gcgcgccgtt cttcctccgg tggttctggg
     1321 agccggacgg gaaccgcccc agcaagtcgg gcaaatccca cacgccggcc gactacatca
     1381 aggcctggcg ctacatccac gaccgcttcg ccaaggacgg caacaccaac gccgtgtggg
     1441 tctggtgccc ggtgtcgctc gacttctacc cgccctccgg gcagacggac ccgaatctgg
     1501 cgccggacca cgccatcaac ccgctgggcg cccagccgta ctaccccggc gacgacgtcg
     1561 tcgactggat gtgcgccgac gggtacaact gggcccccaa cctggccggc gcccgctacg
     1621 agccgttcca ggagctcttc caggccttct acaactggag cgtcccccac aacaagccgc
     1681 tgatggtcgg cgagaccggc gtgcaggaga acaaccccgg cgacaaggcc aactggctca
     1741 aggccgcgca cctcgcgctg acccagcact acccgaacat cgtcgccttc gactacttcg
     1801 acacccagaa cgccaacggg ctggccaaca actggtggct ggagtcgtcg cccgaggcgt
     1861 accaggcctg gaaggacatg gccgccgacc cctacttcaa ccaccgggac acgctgccgc
     1921 cgccctacgg gaccagcgcc gcggtcccgc cgccccccgg ctgcggctgc ccgacgggcc
     1981 agccgtccgg gccgccggtg gtcacgccgc cgggcccgca accgaacacc ggcgaccccg
     2041 gcgaccacac cgccgccgtc ccccagggct actggatgct cggcgccgat tccaaggtct
     2101 acccgttcgg ccaggccagg agcttcggcg acgggccggc cggcgtggcc gccgtcgacc
     2161 tcgagccgac gccgtcgggt cagggctact ggctcctctc ggccgacggg cgggtgacgc
     2221 ccatgggcga cgccactccg ctcgggaacg ccgacatgac ccggctcgcg ccgggcgagc
     2281 aggtgaccag cctctcggcc accccgagcg ggaagggcta ctggatcttc accagccggg
     2341 gccgggcgct ggcctt
//
LOCUS       DATGJT010000486         3273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1413222, whole genome shotgun sequence.
ACCESSION   DATGJT010000486 DATGJT010000000
VERSION     DATGJT010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413222"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VKX24_08315"
     CDS             <1..429
                     /locus_tag="VKX24_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HLJ08528.1"
                     /translation="RGEGGFGGDRGPSGDENTPPDRAPDHEVTYATRSDQALLYRLSG
                     DRNPLHSDPEFAKSAGFPKPILHGLCTYGFTGRALLHALCGSDPTRFKTMEGRFSKPV
                     FPGESLTVRMWVDGGRATFTTESSSGQIVIDRGACEFTPA"
     gene            complement(448..1437)
                     /locus_tag="VKX24_08320"
     CDS             complement(448..1437)
                     /locus_tag="VKX24_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018556713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HLJ08529.1"
                     /translation="MPKSRAVHLVARPEGLPTEADFAVVESEVGDPGDGEVLVENLYM
                     SVDPAMRPRLTVGYELDQPMGGSAIGRIVASRTDAFSPGDLVLDRFGFREYFVSPPEG
                     LQRVEPVEGLPVTVHLHALGGTGFTAYGGILKVAALQPEDKVFVSTAAGAVGSVAAQI
                     AKIKGCWVLGSTGSAEKARWLSEEVGLDAVVNYKETPIRRAIHEAAPEGIDVYFDNVG
                     GDHLDAALAVMHTLGRVAVCGMISGYNEPGARTVVRNLANVIYGRITIRGFTAADYPE
                     LRGDFVSDMTRWLREGRVKYEETVLHGIDAAPRALIGLFEGLNTGKMLVQLAE"
     gene            complement(1530..3047)
                     /locus_tag="VKX24_08325"
     CDS             complement(1530..3047)
                     /locus_tag="VKX24_08325"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HLJ08530.1"
                     /translation="MSEVETSLGRLAGIEEGGLSVFRGIPYASPPIGELRLRAPRPAV
                     PWAGVRDATRFGPAAPQNPPVSSLTGAVPLAHDEDCLTLNIWTPRPDAARRPVLVWIH
                     GGGFTSGSGSEPLYSGAALARRGDVVVVTINYRLGILGFLAHPGLADEEGGGAQGNWG
                     LLDQAAALRWVHDNIAAFGGDPANVTIFGESAGSMSVCDLMALPSAAGLFHRAIAQSG
                     PPSATTMDRAEENAAKLMAELGCADPAQLRAVPVESLLAAQQGVLSPRAGAGLVLVPV
                     ADGASLPTDPARAFASGTAAPVPLLIGTNRDEAKLFMVADPKNRDPDEDLLLRRIDRA
                     FAGSGVKLAPERAIDAYRSARQLRGEPTTPRELWSAIESDRMFRIGSVRAAAAHARTQ
                     PATYAYLFTWESPGMHGALGACHALEIPFVMGNLDAPTMDRFAGTGPAVSALSEQMMD
                     AWLAFARAGDPAHAGLPDWPAYEGSRRSTMVFGAETRPEHAPMDAERAFWDEVPA"
BASE COUNT          440 a         1192 c         1215 g          426 t
ORIGIN      
        1 cggggcgagg gcggcttcgg cggcgaccgc gggccgagcg gggacgagaa cacgcccccc
       61 gaccgcgccc ccgaccacga ggtgacctac gccacccggt cggaccaggc cctcctctac
      121 cgcctctccg gcgaccgcaa cccgctgcac tcggaccccg agttcgccaa gtcggcgggg
      181 ttcccgaagc ccatcctgca cggcctgtgc acctacgggt tcaccggccg ggcgctgctg
      241 cacgccctgt gcgggtcgga cccgacccgg ttcaagacca tggagggacg gttctccaag
      301 ccggtcttcc cgggcgagtc gctgaccgtg cgcatgtggg tcgacggcgg ccgggcgacc
      361 ttcaccaccg agtcgagcag cgggcagatc gtgatcgacc ggggggcctg cgagttcacg
      421 ccggcctgaa gccgggtccc cggccggtca ctccgccagc tggaccagca tcttcccggt
      481 gttcagcccc tcgaagagcc cgatgagcgc gcgcggggcg gcgtcgatgc cgtggaggac
      541 cgtctcctcg tacttcaccc ggccctcgcg cagccaacgg gtcatgtcgg agacgaagtc
      601 gccccggagc tcggggtagt cggcggccgt gaagccgcgg atggtgatcc gcccgtagat
      661 gacgttggcc aggttccgga cgacggtgcg ggcgccgggc tcgttgtagc ccgagatcat
      721 cccgcacacg gccacccgcc ccagggtgtg catcacggcc agggcggcgt ccaggtgatc
      781 gccgcccacg ttgtcgaagt agacgtcgat gccttccggg gccgcctcgt ggatggcccg
      841 tcggatcggg gtctccttgt agttgacgac cgcgtccaga cccacctcct cggacagcca
      901 gcgggccttc tccgccgacc cggtcgagcc gagcacccag caccccttga tcttcgcgat
      961 ctgggcggcc accgagccca cggcgccggc tgcggtcgag acgaacacct tgtcctctgg
     1021 ctgcagggcg gcgaccttca agatgccgcc gtaggcggtg aagccggtcc cgccgagcgc
     1081 gtgcaggtgg acggtgacag ggaggccctc gaccggctcg acgcgctgca gtccctcggg
     1141 cgggctgacg aagtactcgc ggaaaccgaa gcggtcgagg acgaggtcgc ccggactgaa
     1201 ggcgtcggtc cgggacgcga cgatccggcc gatcgccgac ccccccatcg gctggtcgag
     1261 ctcgtagccg accgtgaggc gcggccgcat cgccgggtcg accgacatgt acaggttctc
     1321 gacgaggacc tcgccgtcgc cggggtcgcc cacctcgctc tcgacgacgg cgaagtcggc
     1381 ctcggtcggc aggccctcgg ggcgggcgac gagatggacg gctcggctct tgggcatgcc
     1441 gcatcttcgc accgcccgac cggatctgcg cccctgacgc gacgaggccg gccggacgcc
     1501 gtgacaggac ggcaggggcg gccgatccgc tacgcgggca cctcgtccca gaacgcccgc
     1561 tcggcgtcca tcggcgcgtg ctcgggccgg gtctcggccc cgaacaccat cgtcgagcgc
     1621 cgcgacccct cgtaggcggg ccagtccggc agcccggcgt gcgcggggtc gccggcgcgg
     1681 gcgaaggcca gccacgcgtc catcatctgc tcgctgaggg cggagaccgc cgggcccgtg
     1741 cctgcgaagc ggtccatggt gggggcgtcg aggttgccca tgacgaaggg gatctcgagc
     1801 gcatggcacg cgccgagggc gccgtgcatc ccgggcgact cccaggtgaa gaggtaggcg
     1861 taggtcgccg gctgggtgcg ggcatgcgcc gccgccgccc gcaccgaacc gatccggaac
     1921 atccggtcgc tctcgatcgc cgaccacagc tcgcgcggcg tcgtcggctc acccctcaac
     1981 tgtcgcgccg agcggtaggc gtcgatggcc cgctccgggg cgagcttgac gccggatccg
     2041 gcgaaggccc ggtcgatccg gcgcaggagc aggtcctcgt cggggtcgcg gttcttcggg
     2101 tcggcgacca tgaagagctt ggcctcgtcc cggttggtcc cgatgaggag ggggaccggg
     2161 gcggcggtgc ccgaggcgaa ggcccgggcg gggtccgtcg ggaggctggc cccgtcggcg
     2221 acggggacga gcacgaggcc agcgccggcc ctcggcgaga ggacgccctg ctgggccgcg
     2281 agcagggact cgaccgggac cgcgcgcagt tgcgcggggt cggcgcaccc gagctcggcc
     2341 atcagcttgg ccgcgttctc ctcggcccgg tccatggtgg tcgcagacgg gggcccgctc
     2401 tgcgcgatcg cccggtggaa cagcccggcg gccgacggca gggccatcag gtcgcagacc
     2461 gacatcgacc ccgcagactc gccgaagatc gtcacgttgg ccggatcgcc gccgaatgcc
     2521 gcgatgttgt cgtggaccca gcggagcgcc gcggcttggt cgaggaggcc ccagttcccc
     2581 tgggctccgc cgccctcctc gtcggcgagg cccggatggg ccaggaaccc gaggatgccg
     2641 agccggtagt tgatggtcac gaccacgacg tcgccccgac gggcgagcgc tgcgccggag
     2701 tagaggggct cggagcccga tccgctcgtg aatcccccgc cgtggatcca caccagcacg
     2761 gggcgacggg cggcgtcggg gcgtggtgtc cagatgttga gcgtgaggca gtcctcgtcg
     2821 tgggccaggg ggaccgcacc ggtgagcgag ctcaccgggg ggttctgcgg ggcggcgggg
     2881 ccgaagcgcg tcgcgtcgcg gaccccggcc caggggacgg ccgggcgcgg ggcccgcagc
     2941 cggagctccc cgatcggcgg gctggcatag gggatgccgc ggaagaccga gaggcccccc
     3001 tcctcgatcc cggccagccg tccgaggctc gtctcgacct cgctcatggg tcctcccttc
     3061 gtcggctggc cacacactac gaccgggcct gcctgcggtc cccgtccgcg ccaggccgcg
     3121 tgcggtcgcg tccccggtcc cgagcctggt tccggtcgtc ccctcaggag ccgagcacga
     3181 cccccgaggg gtccttggcc ccccgccacg cgagctcgcg gatccggcgg agggccgccg
     3241 ccgacgccgg cagcgggcac cagaggttga agc
//
LOCUS       DATGJT010000487         3862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_791794, whole genome shotgun sequence.
ACCESSION   DATGJT010000487 DATGJT010000000
VERSION     DATGJT010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3862
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_791794"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1432
                     /locus_tag="VKX24_08330"
     CDS             <1..1432
                     /locus_tag="VKX24_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009739787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HLJ08531.1"
                     /translation="AAVVAGSGAERLVYVARNDPVLPALLFGGGLAGVPLAPVNYRLA
                     DGPLRSMLSRTAPAVAVVEDNAVGRVAGVDGLTVLTLDALRARIEAAAPAEPGVVDPE
                     AIAVLLYTSGTTGEPKAAVLRHRHLASYVISAVEFRGAADDHAALVSVPPYHIAGIVT
                     ILSSLYAGRRIVYQAQFDAERWVEVARDEGITHAFVVPTMLARILDVLEARGEKLPGL
                     LHLAYGGGRMPPPVLERALGLLPGVGFVNAYGLTETASTIAMLRPEDHREAVGSDDPA
                     VRARLGSVGRPLPALEVEIRDPTGRPVPAGERGEIYVRGEQVAGEYLARRALTADGWF
                     PTNDGGRLDEAGFLFVEGRLDDVIVRGGENLSPGEIEDALLAHPAVRDAGVVGLPDEE
                     WGETVAAAVVLRAGGGASVAELQDWVRARLRSSRTPAVIEFRAELPYNETGKLLRRVL
                     RTELGQEGLGQEGLGQEGLGRAGLGQ"
     gene            1429..2109
                     /locus_tag="VKX24_08335"
     CDS             1429..2109
                     /locus_tag="VKX24_08335"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08532.1"
                     /translation="MNPGPATGGAWRTATLRDGIAGWAAARPAGERSVVVLDVARPTL
                     VLGTSQAEDTVDHERAAARGVDVLRRRSGGAAVLVEPGAAVWIDVTIPAGDPLWDSDV
                     GRAFHWLGAAWAEVLTAEGLPARVHQGPLRSTPWSGRVCFAGLGPGEVTADGRKVVGL
                     SQRRTREAARFQCCALLRWEPERLLDVLALGDAQRRQGAEELRDVAAGAGAVPDLAAS
                     FLAAVTAR"
     gene            complement(2113..2460)
                     /locus_tag="VKX24_08340"
     CDS             complement(2113..2460)
                     /locus_tag="VKX24_08340"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLJ08533.1"
                     /translation="MDETDPLDVVTRFGAAWAAHDLDAALALVTDDCLFDATGPAPDG
                     VPHVGPDALRAAWQGIFDDASASFEEEETFGAGDRVVQRWRYRWDGGSIRGVDVFRIR
                     DGRVAEKISYVKG"
     gene            2480..3121
                     /locus_tag="VKX24_08345"
     CDS             2480..3121
                     /locus_tag="VKX24_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014138623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 domain-containing protein"
                     /protein_id="HLJ08534.1"
                     /translation="MAFRGWPAEAIEFYEGLEADNTRAYWTDHKQEYEELVKAPMLAL
                     LADLEADFGAGKIFRPHRDVRFSRDKSPYKTAIGATLERGGYVQFSARGLAAGCGYYV
                     MMPDQLEQYRRAVADDGSGADLERLVAELRRSGADVTARESLRTAPKGYPKDHPRIDL
                     LRHKGLIAWREWPVAAWMGTAKAKQRVVDFLVGARPLTAWLDKHVGPSAMPGR"
     gene            3156..3833
                     /locus_tag="VKX24_08350"
     CDS             3156..3833
                     /locus_tag="VKX24_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014376707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08535.1"
                     /translation="MARILLVEDDDRIRETTRILLEDEGHTVDEAATGEEGLAVVESR
                     PIDCVLLDLLLPGRDGFDICREIRATSAVPVIMLTARTDTYDVVAGLEAGADDYVTKP
                     FEPKELTARVRAQVRRNRIRHPDAVPLQIRDLTIDLVDGTVHRGGEEVPLTRTEFQLL
                     STMAAHPGRIFSRDMLLTEVWGYDDLPESKVVDMHVHRLRLKLEPDPARPQYVMTVRG
                     RGYRVAR"
BASE COUNT          494 a         1422 c         1457 g          489 t
ORIGIN      
        1 ggcggcggtg gtggccggga gcggtgcgga gcgtctggtc tacgtggccc gcaacgatcc
       61 cgtgctgccg gcgctgctgt tcggcggcgg gctggccggt gtgccgctgg cgccggtcaa
      121 ctaccggctg gccgacgggc cgctgcggtc gatgctgtcc cggaccgcgc cggcggtggc
      181 ggtcgtcgag gacaacgccg tcgggcgggt ggccggcgtc gacggcctca ccgtcctcac
      241 cctcgatgcc ctccgggccc ggatcgaggc ggcggccccc gccgaacccg gggtcgtcga
      301 ccccgaggcg atcgccgtcc tgctctacac cagcggcacc accggggagc cgaaggcggc
      361 cgtcctgcgc caccgccacc tggcgtcgta cgtgatctcg gcggtggagt tcaggggggc
      421 ggccgacgac cacgccgccc tggttagcgt gccgccctac cacatcgccg ggatcgtcac
      481 gatcctgagc tccctctacg ccgggcgccg catcgtgtac caggcccagt tcgacgccga
      541 gcgctgggtc gaggtggccc gggacgaggg catcacccac gccttcgtcg tgcccacgat
      601 gctggcccgc atcctcgacg tgctcgaggc ccggggggag aagctcccgg gcctgctcca
      661 ccttgcctac ggcggcggtc ggatgccgcc gcccgtgctg gagcgggccc tcggcctgct
      721 cccgggggtg gggttcgtca acgcctacgg cctgaccgag acggcgtcga ccatcgccat
      781 gctccggccg gaggaccacc gggaggccgt cgggagcgac gatccggcgg tgcgggcccg
      841 gctcggttcg gtgggccggc cgttgccggc gctcgaggtc gagatccgcg accccaccgg
      901 tcggccggtg ccggccgggg agcggggcga gatctacgtc cggggcgagc aggtggccgg
      961 cgaatacctc gcccgccgcg ccctcaccgc cgacgggtgg ttcccgacca acgacggcgg
     1021 tcggctcgac gaggccgggt tcctcttcgt cgagggccgc ctcgacgacg tgatcgtgcg
     1081 aggcggcgag aacctctcgc cgggagagat cgaggacgcg ctgctcgccc atccggcggt
     1141 gcgcgacgcc ggcgtcgtcg gcctccccga cgaggagtgg ggcgagacgg tggccgccgc
     1201 cgtcgtcctc cgagcggggg gcggggcgag cgtcgccgag ctgcaggact gggtccgggc
     1261 ccggctccgc tcgtcccgca cgccggcggt gatcgagttc cgggccgaac tgccctacaa
     1321 cgagaccggc aagctgctcc gccgggtgct gcgcaccgag ctgggtcaag aggggctcgg
     1381 tcaagagggg ctcggtcaag aggggctcgg ccgggcgggg ctcgggcagt gaaccccggt
     1441 ccggcgaccg gcggggcctg gcggacggcg accctccggg acggcatcgc cgggtgggcg
     1501 gcggcccggc cggcggggga gcgcagcgtc gtcgtcctcg acgtcgcccg tccgacgctg
     1561 gtgctcggga cgtcgcaggc cgaggacacg gtggatcacg agcgggcggc ggcgcggggg
     1621 gtcgacgtcc tccgccggcg cagcggcggc gccgccgtgc tcgtcgaacc gggggcggcg
     1681 gtgtggatcg acgtcaccat cccggccggg gacccgttgt gggacagcga cgtcgggcgg
     1741 gccttccact ggctgggggc cgcctgggcc gaggtcctga ccgccgaggg cctcccggcc
     1801 cgggtgcacc agggcccgct ccggtcgaca ccgtggtcgg gccgggtgtg cttcgccggc
     1861 ctcgggccgg gagaggtgac ggcggacggc cgcaaggtcg tcggcctctc ccagcggcgc
     1921 acccgggagg cggcccggtt ccagtgctgc gccctgctgc gctgggagcc cgagcgcctg
     1981 ctcgacgtcc tggccctcgg cgacgcccaa cgccgacagg gagcggagga gctgcgcgac
     2041 gtcgccgccg gagccggcgc cgtccccgac ctggcggcgt cgttcctcgc cgccgtcacc
     2101 gcccgctgag gatcagccct tcacgtagga gatcttctcg gccacccggc cgtcgcggat
     2161 gcggaagacg tcgacacccc ggatgctgcc gccgtcccag cggtaccgcc accgctgtac
     2221 gacccggtcg ccggccccga acgtctcctc ctcctcgaac gacgccgagg cgtcgtcgaa
     2281 gatcccctgc caggcggccc ggagagcgtc cgggccgacg tgggggacgc cgtcgggcgc
     2341 gggcccggtg gcgtcgaaca ggcagtcgtc ggtcaccagg gccagggcgg cgtcgaggtc
     2401 gtgggcggcc cacgccgccc cgaaccgggt caccacgtcg agcggatcgg tctcgtccac
     2461 gccgataacc tacgccacca tggcgttccg gggctggccg gccgaggcga tcgagttcta
     2521 cgaagggctg gaggccgaca acacgcgggc ctactggacg gaccacaaac aggagtacga
     2581 ggagctcgtc aaggctccga tgctggcgct gctggccgac ctggaggcgg acttcggcgc
     2641 cgggaagatc ttccgccccc accgcgacgt ccgcttcagc cgcgacaagt cgccctacaa
     2701 gacggccatc ggcgccacgc tggagcgcgg cgggtacgtg cagttctcgg cccgggggct
     2761 ggcggccggc tgcggctact acgtgatgat gcccgaccag ctcgagcagt accgccgggc
     2821 ggtggccgac gacgggagcg gcgccgacct ggagcgcctg gtcgccgagc tgcgccggag
     2881 cggcgccgac gtcaccgccc gggagtcgct gcggacggcg cccaagggct acccgaaaga
     2941 ccatccccgc atcgacctgt tgcgccacaa gggcctcatc gcctggcggg agtggccggt
     3001 ggcggcgtgg atgggcacgg ccaaggccaa gcagcgcgtc gtcgacttcc tcgtcggcgc
     3061 ccgtccgctc accgcctggc tcgacaagca cgtcgggccg agcgccatgc cggggcgctg
     3121 actccgcgcc gcccgctcgg cggtaacctc gccgtatggc ccgcatcctc ctcgtcgagg
     3181 acgacgaccg catccgcgag acgacccgca tcctgctgga ggacgagggt cacaccgtcg
     3241 acgaggcggc caccggggag gaggggctgg cggtcgtgga gtcccgcccg atcgactgcg
     3301 tcctcctcga cctgctgctc cccgggcgcg acggcttcga catctgccgg gagatccggg
     3361 ccacgagcgc cgtgccggtg atcatgctga cggcccggac cgacacctac gacgtggtgg
     3421 ccgggctcga ggccggcgcc gacgactacg tcacgaagcc gttcgagccc aaggagctga
     3481 cggcccgggt ccgggcgcag gtccgcagga accggatccg ccaccccgac gccgtgccgc
     3541 tgcagatccg cgacctcacc atcgacctgg tcgacggcac cgtccaccgc ggcggggagg
     3601 aggtccccct cacccgcacc gagttccagc tgctgtcgac catggccgcc caccccgggc
     3661 ggatcttcag ccgcgacatg ctgctgaccg aggtctgggg ctacgacgac ctccccgaga
     3721 gcaaggtcgt cgacatgcac gtccatcggc tgcggctgaa gctcgaaccc gatccggccc
     3781 gtccgcagta cgtcatgacc gtccggggcc ggggctaccg ggtcgcccga tgacacggat
     3841 cagccggtga gcctccggcg gc
//
LOCUS       DATGJT010000488         3017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1513889, whole genome shotgun sequence.
ACCESSION   DATGJT010000488 DATGJT010000000
VERSION     DATGJT010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3017
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513889"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VKX24_08355"
     CDS             <1..288
                     /locus_tag="VKX24_08355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HLJ08536.1"
                     /translation="PHFFPEQGLPPHRPTSLLLWEADVVDHVESLEGFLPAKMAALLA
                     HRSQWRSTMGIDADPTAEEEVFAARIRDRAAEAGAVAGVPLGEAFKRIDRL"
     gene            complement(340..813)
                     /locus_tag="VKX24_08360"
     CDS             complement(340..813)
                     /locus_tag="VKX24_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008259006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HLJ08537.1"
                     /translation="MNKSQLVDKIVADTALGKREVEKVVGAFIDNVQQSVKKGEKVSL
                     PGFGGWSQTQRKARTARNPRTGAAVKVPAGKGVKFTVGATFKDIVAAKRGTAAAKAPA
                     KTAAKAAAAKAPAKASAAKAPARKAPAKAAPAKTATKAPAKTAAKKAPAARASKR"
     gene            complement(1078..1971)
                     /locus_tag="VKX24_08365"
     CDS             complement(1078..1971)
                     /locus_tag="VKX24_08365"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HLJ08538.1"
                     /translation="MTFTLDPGQPIPKTVSKAAEKQLRKIVEALTDQAGLDPDEATHD
                     ARKRTKKLRALLRLVRPELGEKVYRRENRALRDAARRLSPVRDAWVLVEALDGLVAPP
                     DEDIDPASVAALRAVLVREHRMLQEDQAEGRTAQRSAEEFERVLARVARWPLRDNGWR
                     SLEEGLEAVTRAGRKAMAAAEAAGTAEAFHEWRKQVKYLRHQFALLRQVWPDVLDAME
                     ATADELGEVLGADHDLAVLRERVETASVLLPASRKALVRRIDARRTGHRSEALTLGHR
                     LYAEKPSGLTDRLGRLWNAAA"
     gene            complement(2030..2929)
                     /locus_tag="VKX24_08370"
     CDS             complement(2030..2929)
                     /locus_tag="VKX24_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013677518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ08539.1"
                     /translation="MNRTDVEFNAEGTTLRGWLYRPDGDGPVPGVVMAHGFSAVKEMY
                     LDSFAEVFAGAGLAVLVFDNRNFGASDGEPRYEIDPWAQVRDYRHAITYLQSMPGIDR
                     ERIGVWGSSYSGGHAIVVAAIDKRVKAVVSQVPLVSGFGNVQRLVRSDFLPMVRAQLD
                     ADREARFGGKEPGMIPVVAEDPLAPSALPTPDSWQWFTETGKTRAPSWHNEVTLRTLE
                     MLMEYEPGSYIERISPTPLLMVVAAGDVLAVADLAFDAYERAREPKKLVVLPGGHFGA
                     YTGPDFELSSGAARDWLVQHLLG"
BASE COUNT          407 a         1087 c         1068 g          455 t
ORIGIN      
        1 ccccacttct tccccgagca gggcctgccg ccgcaccggc cgacgtcgct gctgctgtgg
       61 gaggccgacg tcgtggacca cgtcgagagc ctcgagggct tcctgccggc caagatggcc
      121 gccctcctcg cccaccggag ccagtggcgc agcacgatgg gcatcgacgc cgatccgacc
      181 gccgaggagg aggtcttcgc cgcccgcatc cgggatcggg cggccgaggc cggtgcggtc
      241 gccggggtgc cgctcggcga ggcgttcaaa cgcatcgacc ggctctgaac gcgtgaaagc
      301 ggcgccccga ggggcgccgc ttcacggaga aggaacggct cagcgcttgg aggcgcgggc
      361 ggcgggggcc ttcttggccg cagtcttcgc cggggccttg gtcgccgtct tggccggcgc
      421 ggccttggcc ggagccttgc gggccggcgc cttggccgcc gaagccttgg ccggggcctt
      481 ggctgccgcg gccttcgccg ccgtcttggc cggggccttg gccgccgccg tcccgcgctt
      541 ggcggcgacg atgtccttga aggtggcgcc gacggtgaac ttcacgccct tgccggcggg
      601 gaccttcacg gccgccccgg tgcgggggtt ccgggccgta cgggccttgc gctgcgtctg
      661 gctccagccg ccgaacccgg ggagggagac cttctcgccc ttcttcacgg actgctgcac
      721 gttgtcgatg aaagcgccga cgaccttctc gacctctcgc ttgcccaaag cggtgtcagc
      781 aacgatcttg tccaccagtt gggacttgtt cacaccgacc tcccgagtta acggctgctt
      841 caacgtggaa tcagaaccta caaacgcggg ttcgtcaagc atcattttcg aggcagggca
      901 aggagatcag gggccttacc gccgagaaac ccttacggca caacggttct gcgccactgc
      961 ggccgtcgcc gggaaatgtc ggaaaagttc ggtggcgggg ggtccaggac ccttgtggga
     1021 caaggaaagt gggtcggccg gagggcagaa tccccgacgg ggcaacggtc cggccggtca
     1081 ggcggccgcg ttccagagcc gccccagccg gtccgtgagc ccggaaggct tctcggcgta
     1141 gagccggtgc ccgagggtca gggcctcgga ccggtgaccg gtgcggcggg cgtcgatccg
     1201 ccggacgagc gccttcctgc tcgccggaag tagcaccgac gccgtctcca cccgctcccg
     1261 caggacggcc aggtcgtggt cggcgccgag cacctccccg agctcgtcgg ctgtggcctc
     1321 catggcgtcg aggacgtcgg gccagacctg gcgcaacagg gcgaactggt gacgaaggta
     1381 cttcacctgc ttgcgccact cgtggaaggc ctcggcggtg ccggcggcct cggcggcggc
     1441 catcgccttc cgcccggccc gggtgacggc ctccaaaccc tcctccaggc tgcgccagcc
     1501 gttatcccgc aggggccacc gggccacccg ggccagcacc cgctcgaact cctcggcgga
     1561 ccgctgcgcc gtccggcctt cggcctggtc ttcctggagc atgcggtgct cccggaccag
     1621 caccgcccgc agcgccgcca ccgacgccgg gtcgatgtcc tcgtcgggcg gggcgaccag
     1681 cccgtcgagc gcctcgacca gcacccaggc gtcgcgcacc gggctcagcc ggcgggcggc
     1741 gtcacgcagg gcccggttct cccggcggta caccttttcc ccgagctccg ggcgcaccag
     1801 gcggagcagc gcccggagct tcttcgtgcg cttgcgggcg tcgtgggtgg cctcgtcggg
     1861 gtcgaggccg gcctgatccg tgagggcctc cacgatcttc cgcaactgct tctcggccgc
     1921 cttgctgacg gtcttcggga tcggctggcc ggggtcgagc gtgaatgtca tgcagagggg
     1981 atacccggca ccgccggcgt tcattgccgc cggcggtgcc ggggacggct caaccgagca
     2041 ggtgctgcac cagccagtcg cgggctgccc ccgacgacag ctcgaagtcg ggcccggtgt
     2101 aggcgccgaa gtggccgccg gggagcacga cgagcttctt cggctcccga gcccgctcgt
     2161 aggcgtcgaa ggccaggtcc gccacggcga ggacgtcacc ggcggcgacc accatgagca
     2221 acggcgtggg actgatccgc tcgatgtagg agcccggctc gtactccatc agcatctcca
     2281 gcgtccgcag ggtgacctcg ttgtgccacg acggcgcccg ggtcttcccc gtctcggtga
     2341 accactgcca ggagtccggc gtcggcagcg ccgacggcgc cagcgggtcc tcggccacca
     2401 ccgggatcat gcccggctcc ttgccgccga agcgggcttc gcggtcggcg tcgagctggg
     2461 cccgcaccat gggcaggaag tcgctgcgga cgaggcgctg gacgttgccg aacccgctca
     2521 ccagcgggac ctgggagacg accgccttca cccgcttgtc gatggcggcc acgacgatgg
     2581 cgtggccgcc gctgtagctg gagccccaca cgccgatccg ctcccggtcg atgcccggca
     2641 tcgactggag gtaggtgatg gcgtggcggt agtcgcggac ctgggcccag gggtcgatct
     2701 cgtagcgggg ctcgccgtcg ctggccccga agttgcggtt gtcgaagacg aggaccgcca
     2761 gccccgcccc ggcgaagacc tcggcgaagg agtcgaggta catctccttc acggccgaga
     2821 agccatgggc catcaccacc ccggggaccg gcccgtcccc gtcgggccgg tacaaccagc
     2881 cccgcaacgt cgttccctcg gcgttgaact ccacgtcggt gcggttcatc gctccccctt
     2941 gtgcgatcgg gcgcctggcc gactgggtag cgtacgtggc atggccgacg agcgcatcag
     3001 ctggttcccc gtcctcg
//
LOCUS       DATGJT010000489         3658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_792008, whole genome shotgun sequence.
ACCESSION   DATGJT010000489 DATGJT010000000
VERSION     DATGJT010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792008"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="VKX24_08375"
     CDS             complement(<1..654)
                     /locus_tag="VKX24_08375"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020679190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HLJ08540.1"
                     /translation="MASAVSVSGRRNGTARKARRPGAPKLLVEQGCFDDGARLVCGVD
                     EVGRGAWAGPVSVGAVVIGPAPKRILKVRDSKELTPEQREKLYPKILGWAMAAAVGHA
                     SPAECDDLGMTAALRLAGERALAGLAEAGCVPDRIILDGNHDYFGRPDQVRTVIDGDA
                     LCLSVAAASIVAKVTRDRLMAAEAECYPGYDFDSNRGYPSHRHRCALLGYGPTAIHRR
                     "
     gene            complement(679..1476)
                     /locus_tag="VKX24_08380"
     CDS             complement(679..1476)
                     /locus_tag="VKX24_08380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08541.1"
                     /translation="MPPKSSAAFDIGLIGDTGYNSGEDATLLRVRAQMAKYSLAFVTH
                     DGDTKPQSMPCSDTRDKAVYNAFNGFSEPFVYTPGDNEWTDCKNALTRIASLRKIFFS
                     TPNSLGVTKIPLTRQKTYVENARWTKGGVVFTTLDVPGPNSKSPSAGETSARHAANVA
                     WLNAAFDQATATNAPAVMVIWQDDPFNGSADASLVATLKSRTIKFGKPVVLVHGDSHV
                     FTLDHPWPTVPNFTRLETYGDGGTNHWVKATVDPYSPGVFTFTSVTS"
     gene            1445..1882
                     /locus_tag="VKX24_08385"
     CDS             1445..1882
                     /locus_tag="VKX24_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08542.1"
                     /translation="MSKAADDFGGIVVVVVDVVDVVVVDVVVVVVDVVVVDVVVVEVG
                     STGGGAVVVVVVDVVVESVTGGVVGSVDGGVEGSVGGGVEVAVVVPVAPAERSSPTAR
                     TAEPTSAPEARNVITTSTRAARARNTAGNGLSPSDGTPRKWPL"
     gene            complement(1988..2407)
                     /locus_tag="VKX24_08390"
     CDS             complement(1988..2407)
                     /locus_tag="VKX24_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011752904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HLJ08543.1"
                     /translation="MRIALGSDERTVLTDAVADDLRGRGHEVVLVGPPGGQELGWADV
                     GRRVGELVAKGEADTAVLCCWTGTGASIAANKVPGVRAALCTDAETARGARRWNDANV
                     LVLSLRLVSPPVAEEMLDAWFTTDPDPSEAEAIASLG"
     gene            2430..>3658
                     /gene="glgC"
                     /locus_tag="VKX24_08395"
     CDS             2430..>3658
                     /gene="glgC"
                     /locus_tag="VKX24_08395"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014445308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HLJ08544.1"
                     /translation="MAVPKVMTMILAGGEGKRLAPLTADRAKPAVPFGGHYRIVDFAL
                     SNMANAGYLQIVVLTQYKSHSLDLHITRTWRLSTLLGSYVTPVPAQMRRGPRWFAGSA
                     DAVYQNLNLVHDEGPAYILVFGADHIYRMDPRQMVEQHIATGAGVTVAGIRAPRSQAN
                     QLGVIELGEGTKIASFKEKPPQAEGLPDAPDEIFASMGNYVFTTKTLIDIVSLDAEDQ
                     NSHHDIGGSIIPALVEAGEAHVYDFTKNHVPGETERDHAYWRDVGSLDSYYDAHMDLV
                     SVHPIFNLYNRQWPIYTSLPTLPPAKFVLQGAEAGTGMALDSMVCAGSIISGGTVRSS
                     VISPGVLVHPHAVVEQSVLMHDVVVGAGAVVRNAIIDKSVHVPPGARIGVDPLLDKSR
                     FTVSPNGIVVIGKGEKVP"
BASE COUNT          518 a         1280 c         1297 g          563 t
ORIGIN      
        1 ccgccggtgg atcgccgtcg ggccgtaccc gagcagggcg cagcggtggc ggtgcgacgg
       61 gtagccccgg ttgctgtcga agtcgtagcc ggggtagcac tcggcctcgg cggccatcag
      121 ccggtcccgg gtgaccttgg ccacgatcga cgccgccgcc accgacagac agagggcgtc
      181 gccgtcgatg accgtccgca cctggtcggg acggccgaag tagtcgtggt tgccgtcgag
      241 gatgatccgg tcggggacgc agccggcctc ggccaggccg gccagagcgc gctccccggc
      301 cagccggagg gcggccgtca tgccgaggtc gtcgcactcc gcggggctgg cgtggccgac
      361 ggccgccgcc atcgcccagc ccaggatctt cggatagagc ttctcccgtt gctcgggcgt
      421 gagctccttg gagtcccgaa ccttgaggat ccgcttggga gccgggccga tcaccaccgc
      481 cccgacgctc accgggccgg cccaggcgcc ccgcccgact tcgtcgactc cgcacaccag
      541 ccgggcgccg tcgtcgaaac agccctgctc caccagcagc ttcggggccc cgggccggcg
      601 ggccttgcgg gcggtgccgt tccgccgccc ggagacgctg accgccgacg ccatggatcg
      661 gaccgtacca ggcggcgcct agctggtgac ggaggtgaag gtgaagacgc cgggactgta
      721 cggatcgacc gtcgccttca cccagtggtt ggtcccgccg tcgccgtagg tctcgagccg
      781 ggtgaagttg gggacggtcg gccagggatg gtcgagcgtg aagacgtgcg agtcgccgtg
      841 gacgagcacc accggcttgc cgaacttgat cgtccggctc ttcagggtcg ccaccagcga
      901 ggcgtcggcg gagccgttga acgggtcgtc ctgccagatc accatgacgg ccggggcgtt
      961 cgtcgccgtc gcctggtcga aggcggcgtt gagccaggcg acgttggcgg cgtggcgggc
     1021 cgaggtctca ccggcgctcg ggctcttgct gttcggcccg gggacgtcga gggtcgtgaa
     1081 gaccacaccg cccttggtcc agcgggcgtt ctcgacatac gtcttctgcc tggtgagcgg
     1141 gatcttcgtc accccgaggg agttgggggt cgagaagaag atcttccgta gcgaggcgat
     1201 ccgggtcagg gcgttcttgc agtcggtcca ctcgttgtcg cccggggtgt agacgaacgg
     1261 ctccgagaac ccgttgaacg cgttgtagac ggccttgtcg cgggtgtcgc tgcacggcat
     1321 cgactgcggc ttggtgtcgc cgtcgtgggt cacgaaggcc aggctgtact tcgccatctg
     1381 ggcccggacc cggagcagcg tggcgtcctc gccgctgttg tagccggtgt cgccgatgag
     1441 accgatgtcg aaggccgccg acgacttcgg cggcatcgtg gtcgtcgtcg tggacgtggt
     1501 cgacgtcgtc gtcgtggacg tcgtggtcgt ggtcgtggac gtcgtggtcg tggacgtcgt
     1561 cgtcgtggag gtcggatcga ccggaggcgg ggccgtcgtc gtcgtcgtgg tcgacgtcgt
     1621 cgtcgagtcg gtcacgggcg gcgtcgtcgg atcggtcgac ggcggcgtcg aggggtcggt
     1681 cggcggcggg gtcgaggtcg ccgtcgtcgt gcccgtcgcc ccggccgaga ggtcgtcgcc
     1741 gacggcccgg accgccgaac cgacgagcgc gcccgaggcc aggaacgtca tcacgaccag
     1801 cacccgggcg gctcgagctc ggaacacggc gggcaacgga ttgtctcctt cggacggaac
     1861 gcctcggaaa tggccactct gagtgactaa gggcaatcag taagttccgc ccgttgcggt
     1921 gcaatccttc cgggcgggcg ctatccggcg ttcgtaccgt tcgggcggtt gatgcccgaa
     1981 cgggcggtca ccccagagag gcgatcgcct ccgcctccga cgggtcgggg tcggtggtga
     2041 accaggcgtc gagcatctct tccgccacgg gcgggctgac cagccggagg ctgaggacga
     2101 ggacgttggc gtcgttccac cgccgggcgc cccgggcggt ctcggcgtcg gtgcacagcg
     2161 ccgcccgcac cccggggacc ttgttggcgg cgatggaggc gccggtgccc gtccagcagc
     2221 agaggacggc ggtgtcggcc tcgcccttgg ccacgagctc gcccacccgc cggccgacat
     2281 cggcccagcc gagctcctgg ccgcccggcg gccccacgag gacgacctcg tgaccccggc
     2341 cccgcaggtc gtcggccacg gcgtcggtga ggaccgtccg ctcgtcactg ccgagtgcga
     2401 tgcgcacgtt cgctaccgta accgcccgta tggccgtgcc caaggtgatg acgatgatcc
     2461 tggccggcgg cgaagggaag cggctggcgc cgctgaccgc cgaccgggcg aagccggccg
     2521 tgcccttcgg cgggcactac cgcatcgtcg acttcgccct gtcgaacatg gccaacgccg
     2581 gctacctcca gatcgtcgtg ctgacccagt acaagagcca cagcctcgac ctccacatca
     2641 cccggacgtg gcggctctcc acgctgctcg gttcctacgt gacgccggtc ccggcccaga
     2701 tgcggcgggg cccccgctgg ttcgccgggt cggccgacgc cgtctaccag aacctcaacc
     2761 tcgtccacga cgagggcccc gcctacatcc tcgtcttcgg cgccgaccac atctaccgca
     2821 tggacccccg gcagatggtc gagcagcaca tcgccaccgg cgccggtgtc acggtggccg
     2881 gcatccgggc cccccgctcc caggccaacc agctcggcgt gatcgagctc ggcgagggga
     2941 cgaagatcgc ctcgttcaag gagaagccgc cccaggccga ggggctgccg gacgccccgg
     3001 acgagatctt cgcctccatg ggcaactacg tcttcaccac caagacgctg atcgacatcg
     3061 tcagcctcga cgccgaggac cagaactccc accacgacat cgggggcagc atcatcccgg
     3121 cgctggtcga ggcgggcgag gcccacgtct acgacttcac gaagaaccac gtgccgggcg
     3181 agactgagcg ggaccacgcc tactggcgcg acgtcggctc gctcgactcc tactacgacg
     3241 cccacatgga cctcgtctcc gtccacccga tcttcaacct ctacaaccgg cagtggccga
     3301 tctacacgtc gctgccgacg ctgcccccgg cgaagttcgt gctgcagggc gccgaggccg
     3361 gcaccggcat ggcgctcgat tcgatggtct gcgccggcag catcatctcc ggcgggacgg
     3421 tgcgctcctc ggtcatctcg cccggggtgc tggtgcaccc ccacgccgtc gtggaacagt
     3481 ccgtgctcat gcacgacgtg gtggtggggg cgggcgccgt cgtccgcaac gccatcatcg
     3541 acaagagcgt ccacgtcccg ccgggggccc gcatcggggt cgacccgctg ctggacaagt
     3601 cgcgcttcac cgtgtcgccc aacgggatcg tcgtcatcgg gaagggggag aaggttcc
//
LOCUS       DATGJT010000490         4258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_792306, whole genome shotgun sequence.
ACCESSION   DATGJT010000490 DATGJT010000000
VERSION     DATGJT010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4258
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792306"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2310
                     /locus_tag="VKX24_08400"
     CDS             <1..2310
                     /locus_tag="VKX24_08400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08545.1"
                     /translation="LAYRDGGQAVTIPFHRTLTVLGGLDAEHRRRFADRMVAALQGTG
                     SGHGVSLVFVDGSGSRVHLVRDTRGSTTVTDLDSGEDLAEAVADGGHVDWLRLVGLAS
                     ADLLRLGPVHFERDTAHHDPAGRTGGGAAGDDAELAEARAVLAQVEDEYRQVAARHHR
                     VADLRAAIGRLDDDIRLADERAARRRYDDAARAVARLEAELAVLQGAEPAEHKAAGAA
                     VAAVGLAADHRAAVAALDEARAAFGDRRRLDPRALSRALGLPAEIPADLERLQADFLA
                     ASRHRAELTSRLDAGAASDLPSPSAPWVITLARLPHTELWNRAEAVRAARVRAAELSM
                     GLGGAGQHGALVAEIEAAHQVVEEAERDVAATRVKALAMKARRRLAQAREEEQAVLAR
                     AGFVSWLAFQMRRIDVLLEPDALEALRVAELEHQVAAVAWTDLAGDVDPDAALAARDE
                     IGRYAEQMAAAEHNVEATELLHRELVEDAEPAYAAARSALLEACGSFDVEPEHAVSEV
                     AAIVSEARHARLQQSLEEAEAAHRGIEADLEAALTAAGRPGPGHLAERLEAVTGLAAS
                     AARHLEATRSTRNPTEVEADLGRARAALARLARPEWENLPAPAAFSAADADTETEGAD
                     RIAELLDERARVVAEADAAGRGLPDVDRLVDRREALARRVAVLETSAGTGGPVLVAAE
                     EAEMVLLGRFAQTRRVGPEAEPVPVLVDDALAAFPRHDKWRLLDLLARLGEASQVVYL
                     TDDDETIEWARSRAGNGTVGLLAADPVAV"
     gene            complement(2321..2875)
                     /locus_tag="VKX24_08405"
     CDS             complement(2321..2875)
                     /locus_tag="VKX24_08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018890164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HLJ08546.1"
                     /translation="MSKERTMPDRPPLPYEFLPKVPSFTVTSNDMADGQKLSESQVYN
                     DFGVSGGNVSPHLRWEGAPAETQSYAVTCYDPDAPTGSGFWHWVLFDIPADVTELPTG
                     AGSGSMDGLPKGATHVRNDYGKKEFGGAAPPEGHGDHRYVFAVHAVGAEKLGADDSVS
                     PAIVGFMLTFNTIARAVMIPVYGR"
     gene            2924..3781
                     /locus_tag="VKX24_08410"
     CDS             2924..3781
                     /locus_tag="VKX24_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08547.1"
                     /translation="MSMSYARRMWPAFETYHAHVYFVPEAAEEYRRLGLKGGWMGYFA
                     SRSAALGAASPGLVTAVFFNFHPAMVARALPDAWALAAPEDVLAARGRAADAALRRLI
                     PQYVGSAEEAEAAALAREAAEAPALAGRPLFGALRSLPWPEEPHLQLWHACTLLREHR
                     GDGHVVALTAAGLDGCEAHVTLTAAGTVPRATLQTNRKWSDDDWAAAEDRLRERGWLD
                     AGGALTDTGRAGRAEVEARTDALAEEPWRALGPERTQRLLELLAPTARAINEAGGVPV
                     PNPVGVPAP"
     gene            complement(3795..>4258)
                     /locus_tag="VKX24_08415"
     CDS             complement(3795..>4258)
                     /locus_tag="VKX24_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017543636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08548.1"
                     /translation="VVRAVTTPKDVKAISDALHSFGIPTTRSKWRDVNSVLPIASVVG
                     MFLGSVLGAVAGERWYTRISRRVLTAEAGEVDVREPHSHAAVAEQSAAAETNGARNGN
                     GARNGNSADADTDDIDDLTKDELYQRAQEADIPGRSQMNKEELKEALQKQG"
BASE COUNT          511 a         1670 c         1558 g          519 t
ORIGIN      
        1 ctggcctacc gcgacggggg acaagcggtc acgatcccct tccatcgcac cctgacggtg
       61 ctaggcggcc tcgacgcgga gcaccgccgc cgcttcgccg accggatggt cgccgccctg
      121 cagggcaccg gctccggcca cggcgtcagc ctcgtgttcg tcgacggctc gggcagccgg
      181 gtgcacctcg tgcgcgacac ccgggggtcc acgaccgtca ccgacctcga cagcggcgaa
      241 gacctcgccg aggcggtcgc cgacggcggc cacgtcgact ggctccggct cgtcgggctg
      301 gcctcggccg acctcctgcg gctcggcccg gtccacttcg agcgcgacac cgcccaccac
      361 gacccggccg gccggacggg cggcggcgcc gccggcgacg acgccgaact ggccgaagcc
      421 cgggccgtcc tggcccaggt ggaggacgag taccgccagg tggccgcccg ccaccaccgc
      481 gtcgccgacc tccgggcggc catcggccgg ctcgacgacg acatccgcct cgccgacgag
      541 cgggccgccc gccgccgcta cgacgacgcc gcccgcgccg tcgcccgcct cgaggccgag
      601 ctggcggtcc tccagggcgc cgagccggcc gaacacaagg cggccggggc cgccgtggcc
      661 gccgtcgggc tggccgccga ccaccgggcc gcggtcgccg ccctcgacga ggcccgggcc
      721 gcgttcggcg accggcgccg gctcgacccc cgggccctgt cccgggcgct cgggctgccg
      781 gccgagatcc ccgccgatct cgaacggctc caggccgact tcctggccgc gtcccggcac
      841 cgggccgagc tgaccagccg cctcgacgcc ggagccgcct cggacctgcc cagcccgtcc
      901 gccccctggg tcatcacgct ggcccgcctg ccgcacaccg agttgtggaa ccgggccgaa
      961 gcggtgcggg ccgcccgggt ccgggccgcc gagctgtcga tgggactggg cggggccggc
     1021 cagcacggcg cgctggtggc cgagatcgaa gccgcccacc aggtcgtgga ggaggcggag
     1081 cgcgacgtcg ccgccacccg ggtgaaggcg ctggccatga aggcccgccg ccggctggcc
     1141 caggcccggg aggaggagca ggccgtactg gcccgggcgg gcttcgtcag ctggctggcg
     1201 ttccagatgc gccgcatcga cgtcctcctc gagcccgacg ccctcgaggc cctccgcgtg
     1261 gccgagctcg agcaccaggt ggccgccgtg gcctggaccg acctggccgg cgacgtcgac
     1321 cccgacgccg ccctcgccgc ccgggacgag atcgggcgct acgccgagca gatggccgcc
     1381 gcggagcaca acgtcgaggc gaccgagctc ctccaccggg agctggtcga ggacgccgag
     1441 ccggcgtacg ccgccgcccg gagcgcgctg ctcgaagcct gcgggtcgtt cgacgtcgaa
     1501 ccggagcacg ccgtctccga ggtcgccgcc atcgtctccg aggcccgcca cgcccggctg
     1561 cagcagagcc tggaggaggc cgaggccgcc caccgcggca tcgaggccga cctcgaggcg
     1621 gcgctgacgg cggccggccg ccccggcccc ggccacctcg ccgaacgcct cgaggccgtc
     1681 accggcctgg cggcgtcggc cgcccggcac ctggaggcga cccggtccac ccgcaacccg
     1741 acggaggtcg aggccgacct cggccgggcc cgggcggcgc tcgcccgcct cgcccgcccg
     1801 gagtgggaga acctcccggc gccggcggcc ttttcagccg cggacgccga caccgaaacc
     1861 gagggagccg atcgcatcgc cgaactcctc gacgagcggg cccgggtggt ggccgaagcc
     1921 gacgccgccg gccggggcct cccggacgtc gaccgcctcg tcgaccgccg ggaggcgctg
     1981 gcccgccggg tggccgtcct ggagacgtcg gccggcacgg gcggcccggt cctggtggcg
     2041 gccgaggagg cggagatggt gctgctcggc cgcttcgccc agacccgccg ggtgggcccg
     2101 gaggcggaac ccgtccccgt cctcgtcgac gacgccctcg ccgccttccc ccgccacgac
     2161 aagtggcgcc tgctcgacct cctggcccgc ctcggcgagg ccagccaggt ggtctacctg
     2221 accgacgacg acgagaccat cgagtgggcc cgcagccggg cgggcaacgg gacggtcggc
     2281 ctcctcgccg ccgaccccgt ggcggtctga cccgaggtct tcatcgcccg tagaccggga
     2341 tcatcaccgc ccgggcgatg gtgttgaacg tcagcatgaa gccgacgatg gccggcgaca
     2401 cggagtcgtc cgctccgagc ttctccgccc cgacggcgtg gacggcgaag acgtagcggt
     2461 ggtcgccgtg cccctcgggc ggggcggcgc cgccgaactc cttcttgccg tagtcgttgc
     2521 ggacgtgggt ggcgcccttg ggcagcccgt ccatggagcc gctccccgct cccgtcggca
     2581 gctcggtcac gtcggccggg atgtcgaaga ggacccagtg ccagaaaccg ctcccggtcg
     2641 gggcgtcagg gtcgtagcag gtgaccgcgt agctctgggt ctccgccggc gcgccctccc
     2701 aacggagatg cggtgagacg ttcccgccgg agacgccgaa gtcgttgtag acctgggact
     2761 cggagagctt ctgcccgtcg gccatgtcgt tgctggtcac cgtgaaactc ggcaccttcg
     2821 gcaggaactc gtagggcagc ggcgggcggt cgggcatcgt tcgctccttc gacatcgggg
     2881 ttcggtagcg ggggacgggc cgccgtcagc ctacggtgaa gccatgagca tgagctacgc
     2941 ccgccggatg tggccggcct tcgagaccta ccacgcccac gtctacttcg tccccgaagc
     3001 ggccgaggag taccggcgcc tcgggctgaa gggcgggtgg atgggctact tcgcctcccg
     3061 gtcggcggcg ctcggggccg cctcccccgg cctcgtgacc gccgtgttct tcaacttcca
     3121 cccggcgatg gtggcccggg cgctgcccga cgcctgggcg ctggccgcgc cggaggacgt
     3181 gctggccgcc cggggtcgcg ccgccgacgc cgccctccgg cggctcatcc cgcaatacgt
     3241 cggcagcgcg gaagaggccg aggcggcggc gctggcccgg gaagcggccg aggcgccggc
     3301 gctcgccggc cggccgctgt tcggcgccct gcgctcgctg ccgtggcccg aggagccgca
     3361 cctgcagctt tggcacgcct gcacgctgtt gcgggaacac cggggcgacg gccacgtcgt
     3421 cgccctcacc gccgccggcc tcgacggctg cgaggcccac gtcacgctga ccgccgccgg
     3481 caccgttccc cgggcaacgc tgcagacgaa ccggaagtgg agcgacgacg actgggcggc
     3541 ggccgaggac cggctccggg agcggggctg gctcgacgcc ggcggtgcgc tgaccgacac
     3601 cgggcgggcc ggccgggccg aggtcgaggc ccgcaccgac gccctggccg aggaaccgtg
     3661 gcgggccctc ggcccggagc gcacccaacg gctgctggag ctgctggcgc cgacggcccg
     3721 ggccatcaac gaggcgggcg gcgtccccgt ccccaacccg gtgggcgtgc ccgccccctg
     3781 acgggggcgt ccgctcagcc ctgcttctgc agcgcttcct tcagctcttc cttgttcatc
     3841 tgcgaccggc cggggatgtc ggcctcctgg gcccgctggt agagctcgtc cttcgtcagg
     3901 tcgtcgatgt cgtcggtatc ggcgtcggcg ctgttgccgt tccgggcgcc gttgccgttc
     3961 cgggcgccgt tggtctcggc cgcagcactc tgttcggcga cggcggcgtg ggagtgcggc
     4021 tcccggacgt cgacctcgcc cgcctcggcc gtcagtaccc ggcgggagat cctggtgtac
     4081 cagcgctccc cggccaccgc cccgagcacc gaaccgagga acatccccac caccgaggcg
     4141 atcggcagca ccgagttgac gtcgcgccac ttgctccggg tggtcgggat gccgaagctg
     4201 tgcagggcgt cgctgatcgc cttcacgtcc ttcggcgtcg tcacggccct caccacgg
//
LOCUS       DATGJT010000491         2370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1203775, whole genome shotgun sequence.
ACCESSION   DATGJT010000491 DATGJT010000000
VERSION     DATGJT010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1203775"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..1379
                     /locus_tag="VKX24_08420"
                     /pseudo
     CDS             165..1379
                     /locus_tag="VKX24_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020018898.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
     gene            1376..>2370
                     /locus_tag="VKX24_08425"
     CDS             1376..>2370
                     /locus_tag="VKX24_08425"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HLJ08549.1"
                     /translation="MTAAPMELCDQVLDLVGGRADAQVTVQQGRSALTRFANSFIHQN
                     VGEIGVSVSLKLALPDGRVAAASTTRADGDGLAALVEGTLAAAALRPVDPDWPGLAPP
                     APVPDVDHHDAATEAATPDERARRVRAFVDADSSLRAAGYCDTDGGTTAFANSAGQRA
                     EGRSSRATIDGIHQTADSAGSGHGTAVRLTDLDAGGVGAAAADRARRSEAAADIEPGE
                     YEVVLEPECVATILIFLAFYGFNAKQVIEGQSAIRLGEAQFDPAVSIWDDATSPEALG
                     VAFDADGTPKRRLDLVRAGVATALAQDRRTARKMGAESTGHAVGESDAFGAIPSNL"
BASE COUNT          318 a          913 c          849 g          290 t
ORIGIN      
        1 cagaggctcc cggagccgcg cccagaaccg ccccggcgtt caccgcatcc cggcgtcacg
       61 ccgcacccgc ggccgctccg cccgtaatgt ccgcggctcg ggccgatccg gctgccgccg
      121 agcagttgcg ggcccgcgcc ctcatcgccc tcgacgccgg ccgggccggc gaggccgcgg
      181 ccgccatcgc ccgggcgtcg gccacggtgg ccggcccccc gctggtgctg gccgacgtcc
      241 ccgtccggga ggacagctac gagacccctc atcacgagga ccccttcgcc gtctcgctga
      301 cggagaaggc cgacctcgtg ctcggggtga cgaagacgat gcgggcggtc gacggcgtcg
      361 ccctcgccca cgccttcctc accgcctggg acacccgcaa gtggttcgtc tccagccagg
      421 gccaccgcat cagccagcat ctcgtcgagt gcggcggcgg aatggacgcc acagcggtcg
      481 gtgaggccga gacccagcgc cgctcctacc cccaggcctt cggccagttc gaggcggggg
      541 gctacgaggt catccggcgc ttcgacctgc cgggcaacgc cgagcgggtg gcgagcgagg
      601 cggtggccct gctgtcggcc ccgcagtgcc ccgagggcac caccgacctc gtgctggagt
      661 ccagccagct ggccctccag atccacgagt cggtgggcca cgccatcgag ctcgaccgca
      721 tcctcggctg ggaggcggcc ttcgccggaa cgtcgttcct cgagctgccg cgcctcggca
      781 gtctggtcta cggctcgccc ctcatgaaca tcaccgccga cgccacgctg ccgggcgccc
      841 tcggcacgtt cggctacgac gacgagggca ccccggcgca gcgggtcgac atcgtgcggg
      901 acggcacctg ggtcggcgtc ctctccgggc gggactcggc cgccgtggcc gggctgccgc
      961 cgggcgggat ggtgcggggc gacggctaca accgcctgcc gatggtccgg atgaccaacg
     1021 tcgggctgct gccgggcgag tcgtcgctgg aggagatcct gaccgccacc gacgacggcg
     1081 tcctcatggc caccaaccgg tcgtggtcga tcgacgacaa gcggctgaat ttccagttcg
     1141 gttgcgagat cgcctgggag atcacgggcg gtcggctggg ccgcatgctc aagaacccga
     1201 cctacaccgg gatcacgccc cagttctggg gcacgatgga catgctggcc gggccgccgg
     1261 agtggatcca ctggggcgtg ccgaactgcg ggaaggggca gccgatgcag accgcccaca
     1321 ccggccactc ggccgccccg gcccggttcc ggggcgtacg cgtcggggtg cggggatgac
     1381 cgccgccccg atggagctgt gcgaccaggt gctggacctc gtcggcggcc gggccgacgc
     1441 gcaggtcacc gtccagcagg gccgatcggc gctgacgcgc ttcgccaact ccttcatcca
     1501 ccagaacgtc ggcgagatcg gcgtctccgt cagcctcaag ctggcgctgc ccgacggtcg
     1561 cgtcgccgcc gcctccacca cccgggccga cggcgatggg ctggccgccc ttgtcgaggg
     1621 cacgctggcc gccgccgcgc tgcgccccgt ggatcccgac tggcccggcc tggcgccgcc
     1681 ggcaccggtc cccgacgtcg accaccacga cgccgccacc gaggcggcca cgcccgacga
     1741 gcgggcccgc cgggtgcggg ccttcgtcga cgccgacagc tccctgcgcg cggccggcta
     1801 ctgcgacacc gacggcggca cgacggcctt cgccaactcg gccggccagc gggcagaggg
     1861 gcgcagcagc cgggcgacga tcgacggcat ccaccagacc gccgactccg cggggtcggg
     1921 tcacggcacc gccgtccgtc tgaccgatct cgacgcgggg ggcgtcggcg cggcggcggc
     1981 cgaccgggcc cgccggtcgg aggcggcggc cgacatcgag ccgggggagt acgaggtcgt
     2041 cctcgagccg gaatgcgtgg ccacgatcct catcttcctg gccttctacg ggttcaacgc
     2101 caagcaggtg atcgagggcc agtcggccat ccggctcggc gaggcgcagt tcgacccggc
     2161 cgtctcgatc tgggacgacg ccacgagccc cgaagcgctc ggcgtggcct tcgacgccga
     2221 cggcacgccg aagcgccggc tcgacctggt gcgggccggg gtggcgaccg ccctggctca
     2281 ggaccgccgc accgccagga agatgggcgc cgagagcacc ggccacgccg tcggcgagag
     2341 cgacgccttc ggcgccatcc cgtcgaacct
//
LOCUS       DATGJT010000492         3333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_895939, whole genome shotgun sequence.
ACCESSION   DATGJT010000492 DATGJT010000000
VERSION     DATGJT010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895939"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..1414)
                     /locus_tag="VKX24_08430"
     CDS             complement(158..1414)
                     /locus_tag="VKX24_08430"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HLJ08550.1"
                     /translation="MPAARIAVLGTFDVDNYGDHLFPRVARHEFGRRLPDAVVTPFAP
                     YGALHPTGLDDGRPAESLGPWAPERARRLAADHHLVLVGGGELMHLNDPLLAPVYGAS
                     PEELVRLAPSRWFVEGLGPDLEDDCPVVWHAVGVPWAPAEEGAARLRGALGPRPYVTV
                     RDRHSAERLVAAGVERPVDVVPDTALLIDRIMPAASLRARLDRLRAAGGYPPSGSPAL
                     VVQGCDLLLPHLEGVAAAIEGWLSAQRVPPEILALETGRCRGDTEFADRLARALGSRR
                     VWRLPDARSVEDIAAAVAGGELFLGSSLHGAITALVYGRPFVLLHLFGDAKLDGFGDL
                     TGLERLVVHHPGDIPKGMRSAAEPVPVGLMPSLQARIDVHFDRLADLAAERAAARADG
                     GLSPARRTLLPAAARRLYGRLRRPLR"
     gene            complement(1452..2441)
                     /locus_tag="VKX24_08435"
     CDS             complement(1452..2441)
                     /locus_tag="VKX24_08435"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HLJ08551.1"
                     /translation="MPPSLLALDFSAPDRLWLLAAAAGLAVAYVVMQARRRRDAAKFA
                     APALLPLLVPGKAPWWRHAVALVFVAGLVLATVAAAQPTVPATAQRQQATIMVAIDTS
                     DSMKATDVAPSRLAAAEAEAKTFISDLPAAYSVGIVTVDASPKVLVAPTTDHEAAKVA
                     LDRLATRPNTALGDAIFTALAALPAGSTPASGQTDSAKAPAARIVLLSDGGSNAGRPD
                     AEAIAAAKAAKVPVSTIAIGTAHAQVQSAGQTVDVPVDPTALKAIADGTGGKFFEAAT
                     EAQLRQIYADINADVQVVPIDRGVAVWFAGAALVLLLAASLTSILRTGRVVWT"
     gene            complement(2441..>3333)
                     /locus_tag="VKX24_08440"
     CDS             complement(2441..>3333)
                     /locus_tag="VKX24_08440"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HLJ08552.1"
                     /translation="VWVQRRRRHAAVRFTNVALLAEVAPPRPGWRRHVPAAAVALALC
                     ALVVSIAEPVHTVRVPKDAATIMLTIDVSASMDATDVAPTRLQAAVAAGKSFVDDLPP
                     QIKVGLIAFSRTAQVIASPTVDHQAVRDDIDRLILGTGTATGDAIYAALDALAAANDT
                     AGAAPTTKGGQAIVLLSDGVPTVGRPVAGAAQEAANEGVPISTIAFGTQDGTVAIGGR
                     LVSVPADPDTMSAIAETTHGKFFQAASEKQLRTIYKNIGTRVGYETEQHDASGPVLTL
                     AVLALLVGSGLALMWNGRLV"
BASE COUNT          458 a         1153 c         1337 g          385 t
ORIGIN      
        1 aggaaggatc accgagttcc tcggccagtg gaccaacgac cgggagaccg aggcgaaggg
       61 ccgggcggag cagaagaccg tcgaaccgac cgagaacgtc gtggagcggg agaaggagga
      121 ggtccgccgg gaccacggcg acgtgagcga ctgaccgtca gcgcagcggg cggcgcaggc
      181 ggccgtacag gcggcgggcc gccgccggga gcagcgtccg gcgggccggc gacaggccgc
      241 cgtcggcgcg ggcggcggcc cgctctgcag ccaggtcggc cagccggtcg aagtggacgt
      301 cgatgcgggc ctgcagcgac ggcatcagcc cgaccggcac gggctcggcg gcggacctca
      361 tccccttggg aatgtcgccg gggtgatgga ccaccagccg ctccagaccg gtcaggtcgc
      421 cgaagccgtc gagcttggcg tcgccgaaga ggtggagcag cacaaagggg cgtccgtaga
      481 cgagggccgt gatggcaccg tgcagcgaac tgccgaggaa cagctcgcca ccggcgacgg
      541 cggcggcgat gtcctcgacc gaacgggcgt cgggcagccg ccacacccgc cgcgagccga
      601 gcgcccgggc caaccggtcg gcgaactccg tatcgccccg gcaacggccg gtttccaggg
      661 caaggatctc cggcgggacg cgctgcgccg acagccagcc ctcgatcgcc gccgccactc
      721 cctcgaggtg gggcaggagc aggtcgcatc cctggacgac cagcgccggc gagccggacg
      781 gcggatagcc gccggcggcc cgcagcctgt ccagccgggc ccgcagcgat gcggccggca
      841 tgatccggtc gatcagcagc gccgtgtcgg gcaccacgtc gaccggccgt tccacgccgg
      901 ccgcgaccag gcgctcggcg gagtgccgat cccggacggt gacgtagggc cggggtccga
      961 gagccccccg cagccgggcg gccccctcct ccgccggcgc ccaggggacg cccacggcgt
     1021 gccacaccac cgggcagtcg tcctcgaggt ccggcccgag accctcgacg aaccagcggc
     1081 tcggtgccag ccgcacgagc tcctccggcg acgcgccgta caccggagcc aggagcgggt
     1141 cgttgaggtg catgagctcg ccgccgccca cgagcacgag atggtgatcg gcggccaggc
     1201 gacgggcccg ctccggtgcc cacggcccca gcgactccgc cggccggccg tcgtcgagcc
     1261 cggtggggtg gagggcgccg tagggggcga acggcgtcac cacggcgtcc gggagccggc
     1321 gcccgaactc gtggcgggcg acccggggga agaggtgatc gccgtagttg tcgacgtcga
     1381 acgtcccgag gacggcgatc cgggcggcgg gcatcgctga acgctagtag ggcgaagcgc
     1441 ccccgccggc gtcaggtcca gacgacccgg cccgtccgca ggatcgaggt cagcgatgcg
     1501 gcgaggagga gcacgagcgc cgccccggcg aaccacaccg ccaccccccg gtcaatcggg
     1561 acgacctgca cgtcggcgtt gatgtcggcg tagatctggc gcagctgcgc ttcggtggcc
     1621 gcctcgaaga acttcccgcc ggtgccgtcg gcgatggcct tgagtgccgt cgggtcgacg
     1681 gggacgtcga ccgtctgccc ggcgctctgg acctgggcgt gggcggtgcc gatggcgatg
     1741 gtcgacaccg gcaccttggc cgccttggcg gcggcgatgg cttcggcgtc gggccggccg
     1801 gcgttgctgc ccccgtccga gaggaggacg atccgggcgg ccggcgcctt ggccgagtcg
     1861 gtctggcccg acgccggcgt gctgccggcc gggagggcgg ccagggcggt gaagatggcg
     1921 tcgcccagtg ccgtgttggg acgggtggcc agccggtcga gggccacctt cgccgcttcg
     1981 tggtcggtgg tcggggccac cagcaccttg gggctggcgt cgacggtgac gatgccgacc
     2041 gagtaggccg ccggcaggtc ggagatgaac gtcttggcct ccgcctccgc cgccgccagc
     2101 cggctggggg cgacgtcggt ggccttcatc gagtcggagg tgtcgatggc caccatgatc
     2161 gtggcctgct gccgctgcgc cgtggccggg acggtcggct gggcggcggc cacggtggcc
     2221 agcaccagcc cggccacgaa gacgagggcg acggcgtggc gccaccacgg cgccttcccc
     2281 ggcaccagca gcggcaggag cgcgggagcg gcgaacttgg cggcgtcgcg ccgccggcgg
     2341 gcctgcatga ccacgtaggc cacggcgagg ccggcggcgg cggcgagcag ccacagccgg
     2401 tccggggcgg agaagtcgag ggccaggagg gacgggggca tcagaccagc ctcccgttcc
     2461 acatcagggc cagcccggag ccgacgagga gggccaggac ggccagggtg aggacgggcc
     2521 cgctggcgtc gtgctgctcg gtctcgtagc ccacccgggt gccgatgttc ttgtagatgg
     2581 tgcggagctg cttctccgac gccgcctgga agaacttccc gtgggtcgtc tcggcgatgg
     2641 ccgacatggt gtcggggtcg gccggtaccg ataccagccg gccgccgatg gccaccgtgc
     2701 cgtcctgggt gccgaaggcg atggtggaga tcggcacgcc ctcgttggcc gcttcctggg
     2761 cggcgccggc caccggccgg ccgaccgtcg gcacgccgtc cgacagcagg acgatggcct
     2821 gtccgccctt ggtggtgggg gccgccccgg cggtgtcgtt ggccgccgcc agggcgtcga
     2881 gagcggcgta gatggcgtcg ccggtggcgg tgccggtccc gaggatcagc cggtcgatgt
     2941 cgtcccgcac cgcctggtgg tcgacggtgg gcgaggcgat gacctgggcc gtccggctga
     3001 aggcgatcag ccccaccttg atctggggcg ggaggtcgtc gacgaaggac ttgccggcgg
     3061 ccacggccgc ctggaggcgg gtgggggcca cgtcggtggc gtccatggag gccgacacgt
     3121 cgatcgtcag catgatcgtg gcggcgtcct tcgggacccg gacggtgtgg acgggctcgg
     3181 cgatcgacac gacgagggcg cagagggcca gcgccacggc ggcggccggc acgtggcggc
     3241 gccagccggg ccggggcggg gccacctcgg ccagcagggc gacgttggtg aagcggacgg
     3301 cggcgtggcg ccggcggcgc tgcacccaga cgt
//
LOCUS       DATGJT010000493         5058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_997858, whole genome shotgun sequence.
ACCESSION   DATGJT010000493 DATGJT010000000
VERSION     DATGJT010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5058
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_997858"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VKX24_08445"
     CDS             complement(<1..466)
                     /locus_tag="VKX24_08445"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08553.1"
                     /translation="MAAALLARRLDDAGVKARVSSAGLLFDGKPVTDHGLAVMADRGI
                     DTSGHRSRRLTRELVDAADLVLGMARSHVQEAVALVPGALHRTFTLKEIVRRGEASGR
                     PAAGEPLGAWLTRLGSGRRPSDLLGESDADDVADPIGGPRRGYQRTADELDDL"
     gene            564..4067
                     /locus_tag="VKX24_08450"
     CDS             564..4067
                     /locus_tag="VKX24_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HLJ08554.1"
                     /translation="MCGVVAVLRRRSGGSPPDAAELTTDLDSALAALAAGPAGLADAA
                     AGLEALDGRLRGPAGVRVLAAHPDLAARLAAAMVEARSAIAGLEADLDARRLPLAGAE
                     LEAANAALVRLKDAVWAIATDRLRAAREVTVLAGGPEGDGAGAGDAALDGYWAIHVAL
                     SAIDRLEVRGRDSAGLHLLVTGHGIDPSDPGIAERSADPLFRSGSVRLVPDGAGSPGG
                     GPALAFVYKAAAEIGELGDNVRAVRAAILDDGLLRRALASPEAEVTVVGHTRWASVGL
                     ISEANAHPLNSEEAGRPVQQPYVAAALNGDVDNHLELRAAEGLATPAEITTDAKVIPM
                     LVSRRMAEGSPPAEAFRRTAASFEGSVAIAANAAADPGSLLLALRGSGQALYIGLADD
                     AFVVASEPYGVVEETPRYLRMDGEATGGQIVVLRRAGAGTLAGLERLAYDGTPLPVAD
                     DEVTVAEITTRDVDRAGYPHFLLKEVSEAPESFRKTLRGKVVDGADGRLTVALGEDTL
                     PAAVRKGLGAGAYRRVLVIGQGTAAVAGQILAATLTSVLPPAATVTVAALPASELSGF
                     GLDDDMSDALVIAISQSGTTTDTNRTVDLVRARGAAVLAIVNRRNSDLVEKADGVLYT
                     SDGRDVEMSVASTKAFYAQVAAGFLLSLAIARELGAGNARQEHELLAGLRELPAALEE
                     VLAARPEIAAAASAHAPPRRHWAVVGNGPNRLAASELRIKLSELAYKSIACDATEDKK
                     HIDLSSEPLILVCAAGLPPAAAADVGKELAIYRAHKAAPVVIATRGSAAAYQAALAVI
                     EVPEVHPQLAFVLSAMAGHLFGYEAALAIDAQARGLREIRAAVEDVVVGSDGPPEHLL
                     VRLAPRMVTGARTFLDGLRNGAYNGALEAGTAVQLASVLRYATRALPLELYELDHGRV
                     GTPGAVVEDLAAALTRAIDELTRPVDAIRHQAKTVTVGISRSEEELFRAGLVAAALSA
                     GMPRERFSYRVLRTLGALGPAVEEVTGFTRYRIEGDVGAAGDRAAGARIFVVDKGGVA
                     AGLRSRAEGDGGDVLRGTKHRAATLQEVTVARGGTDGRTVVLVPEIRQGAVVGMTLLH
                     GRFADRLPGPTMRAVLEGYQSRYGALVDAVTETAPFSDERLGELPVIDLLTSPVYVLA
                     EAWRSFPGESPWPAGGTKRER"
     gene            complement(4219..4749)
                     /locus_tag="VKX24_08455"
     CDS             complement(4219..4749)
                     /locus_tag="VKX24_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08555.1"
                     /translation="MLTPSRPFFVGAAVLAGVLTGGVVAAGCGGGGSHTYKAGTPAAT
                     GNVPDCSVVPLDVVTKDLGIPLTGPAGGPRPAGGYTCNYNHVKGGGSAPEVMQLGANV
                     TPETFAIVRNGLKAANNPIKTIHGWGDEAWAATVYNVVDENSFAVRKGKVSVLIQSTA
                     DYDHIKKLMKDVLAKL"
BASE COUNT          621 a         1921 c         1856 g          660 t
ORIGIN      
        1 tcaggtcgtc gagctcgtcg gccgtgcgct ggtagccgcg gcggggcccg ccgatcgggt
       61 cggcgacatc gtcggcgtca gactcgccga ggaggtcgga cgggcgccgc cccgagccca
      121 gccgggtcag ccaggccccg agtggctcgc cggcggccgg acggcccgac gcttcgcccc
      181 ggcgcacgat ctctttcagc gtgaacgtcc ggtggagcgc cccgggtacc agggccacgg
      241 cctcctgcac atggctgcgg gccatgccga gaacgaggtc ggcggcgtcg accagctccc
      301 gggtgaggcg gcgggaccgg tggcccgagg tgtcgatccc ccggtcggcc atgaccgcca
      361 ggccgtggtc ggtgaccggc ttgccgtcga agagcagccc ggccgacgac acccgggcct
      421 tgacgccggc gtcgtcgagg cgccgggcca gcagcgcggc ggccatcggg gaacgacagg
      481 tgttcccggt gcagaccatg aggatctcga tgggccggat gttacggctc cggccgggcc
      541 gccccggacg tagtctcaaa cccatgtgtg gagtcgtggc ggtcctccgc cgccgctcgg
      601 gtggatcgcc gcccgacgcc gccgaactga caaccgacct cgactccgcg ctggcggcgc
      661 tggccgccgg cccggccggt ctggccgacg ccgccgccgg actcgaagcg ctggacgggc
      721 ggctgcgggg cccggccggt gtccgggtcc tggccgccca tcccgacctg gccgcccgcc
      781 tcgccgcggc catggtcgag gcccgctcgg cgatcgccgg gctggaggcc gacctggacg
      841 cccggcgcct cccgctggcc ggcgccgagc tggaggccgc caacgccgcc ctcgtccggc
      901 tgaaggacgc cgtctgggcc atcgccaccg accggctccg ggcggcccgg gaggtgacgg
      961 tcctggccgg cggcccggaa ggtgatgggg caggcgccgg tgacgccgcc ctcgacggct
     1021 actgggccat ccacgtcgcc ctgtcggcca tcgaccggct cgaggtccgg ggccgcgact
     1081 cggccgggct gcacctgctg gtcaccggcc acgggatcga cccgtcggac cccgggatcg
     1141 ccgaacgatc cgccgacccc ctcttccggt cgggctcggt gcggctcgtc cccgacggcg
     1201 ccggctcgcc cggaggcggc ccggcgctgg ccttcgtcta caaggcggcg gcggagatcg
     1261 gggagctggg cgacaacgtg cgggccgtcc gggcggccat cctcgacgac ggtctgctcc
     1321 ggcgggccct cgcctccccg gaggccgagg tcacggtcgt cggccacacc cgctgggcca
     1381 gcgtcgggct gatcagcgag gccaacgccc accccctcaa cagcgaagag gccggccggc
     1441 cggtgcagca gccctacgtc gccgccgctc tcaacggcga cgtcgacaac cacctcgagc
     1501 tgcgggccgc cgagggcctg gccaccccgg ccgagatcac caccgacgcc aaggtcatcc
     1561 cgatgctcgt ctcccgacgg atggcggaag ggtcacctcc ggccgaggcc ttccgtcgca
     1621 ccgcggcgtc gttcgaaggg tcggtggcca tcgccgccaa cgccgccgcc gatccgggat
     1681 cgctgctcct cgccctccgg ggcagcggcc aggcgctgta catcggcctg gccgacgacg
     1741 ccttcgtcgt ggccagcgaa ccgtacggcg tggtcgagga gaccccccgc tacctccgga
     1801 tggacggcga ggccaccggc gggcagatcg tggtcctccg ccgcgccggc gccggcacct
     1861 tggccggcct cgagcgcctg gcctacgacg gcactcccct gccggtggcc gacgacgagg
     1921 tcaccgtggc cgagatcacc acccgcgacg tcgaccgggc cggttatccg cacttcctgc
     1981 tgaaggaggt ctccgaggcg cccgagtcgt tccggaagac gttgcggggc aaggtggtcg
     2041 acggggccga cgggcgcctg accgtcgccc tcggcgagga caccctgccg gcggcggtcc
     2101 gcaagggcct cggcgccggc gcctaccggc gggtgctggt catcggccag gggacggccg
     2161 ccgtggccgg ccagatcctg gccgccacgc tgacgtcggt gctgccgccg gccgccaccg
     2221 tgaccgtcgc cgccctcccg gccagcgagc tgtcgggctt cggcctcgac gacgacatga
     2281 gcgacgcgct ggtgatcgcc atcagccagt cgggcacgac gaccgacacc aaccgcaccg
     2341 tcgacctcgt gcgggcccgg ggagcggcgg tgctggccat cgtcaaccgc cgcaacagcg
     2401 acctcgtcga gaaggccgac ggcgtgctct acacgtcgga cgggcgcgac gtcgagatga
     2461 gcgtcgcctc caccaaggcc ttctacgccc aggtggcggc agggttcctg ctgtcgctgg
     2521 ccatcgcccg ggagctcggc gccggcaacg cccggcagga gcacgagctg ctcgccggtc
     2581 tgcgggagct gcccgccgcc ctggaggagg tgctggccgc ccggccggag atcgccgccg
     2641 ccgcctcggc ccacgccccg ccccggcgcc actgggcggt ggtcggcaac ggccccaacc
     2701 ggctggcggc gtccgagctg cggatcaagc tgtcggagct ggcctacaag tcgatcgcct
     2761 gcgacgccac cgaggacaag aagcacatcg acctgtcctc cgagccgctg atcctggtct
     2821 gcgccgccgg gctcccgccc gcggcggccg ccgacgtcgg caaggagctg gccatctacc
     2881 gggcccacaa ggcggcgccg gtcgtcatcg ccacccgggg cagcgccgcc gcctaccagg
     2941 cggcgctggc ggtcatcgag gtgccggagg tccaccccca gctggccttc gtgctctcgg
     3001 ccatggccgg ccacctcttc ggctacgagg ccgccctggc catcgacgcc caggcccggg
     3061 gcctgcgcga gatccgggcg gcggtggagg acgtcgtcgt ggggagcgac ggcccgcccg
     3121 agcaccttct ggtccggctg gcgccccgga tggtgaccgg cgcccggacg ttcctcgacg
     3181 ggttgcgcaa cggggcctac aacggcgctc tggaggcggg gacggcggtg cagctggcct
     3241 cggtcctccg ctacgccacc cgggccctcc ccctcgagct ctacgagctc gaccacggcc
     3301 gggtcggcac gcccggcgcg gtcgtggagg acctcgccgc cgccctcacc cgggccatcg
     3361 acgagctgac ccgtcccgtc gacgccatcc gccaccaggc caagaccgtc accgtcggga
     3421 tctcccgctc cgaggaggag ctcttccggg ccgggctggt ggcggcggcc ctgtcggccg
     3481 ggatgccccg ggagcggttc agctaccggg tgctgcggac gctcggagcc ctcgggccgg
     3541 cggtcgagga ggtcaccggc ttcacccgct accggatcga gggcgacgtg ggcgccgccg
     3601 gcgaccgcgc cgcgggcgcc cgcattttcg tcgtcgacaa gggcggcgtc gccgccgggc
     3661 tgcggtcccg ggccgagggc gacggcggcg acgtcctccg ggggacgaag caccgggcgg
     3721 ccaccctcca ggaggtgacg gtggccaggg gcgggaccga cggccgcacc gtcgtcctcg
     3781 tcccggagat ccgccagggc gccgtggtgg gcatgacgct gctccacggc cgcttcgccg
     3841 accggttgcc cgggccgacg atgcgggccg tcctggaggg ctaccagtcc cgctacggcg
     3901 cgctggtcga cgccgtcacc gagaccgccc ccttcagcga cgaacggctc ggtgagctcc
     3961 cggtgatcga cctgctgacg tcgccggtct acgtgctggc cgaggcgtgg cgttcgttcc
     4021 cgggggagtc cccgtggccc gcgggcggga cgaaaaggga acgttaagcc cccggtaaga
     4081 atggcccaag gcgggaggac tcgccccaaa gccggagaaa ttggacagtg aaaagagacg
     4141 agccggcggc gacgcccctg gccgattccc ccctcggcca cgggcgcccg ccggctcttg
     4201 tccttcccgg cgccggcgct acagcttggc cagcacgtcc ttcatcagct tcttgatgtg
     4261 gtcgtagtcg gcggtgctct ggatcagcac cgagaccttc cccttgcgga cggcgaagct
     4321 gttctcgtcc accacgttgt agaccgtggc cgcccaggcc tcgtcgcccc agccgtggat
     4381 cgtcttgatc gggttgttgg ccgccttcag gccgttgcgg acgatggcga aggtctcggg
     4441 cgtgacgttg gcaccgagct gcatgacctc cggtgccgat ccgccgccct tcacatggtt
     4501 gtagttgcac gtgtatccgc cggcgggccg ggggccgccg gccgggccgg tgagcgggat
     4561 gcccaggtcc ttcgtcacga cgtcgagcgg gacgaccgag cagtcgggaa cgttgcccgt
     4621 cgccgccggc gtgcccgcct tgtaggtgtg gctgccgccg ccgccacagc cggcggcgac
     4681 gacgccgccc gtgaggacgc cggccaggac ggcggccccg acgaagaacg gtcgggaagg
     4741 agtgagcacg gcgggagtct acggtccgtt tcggcgtgcg atggggccga tgacggttgt
     4801 gcgacgtttc gcccctcgcc ggggaatcgg cgccccggcc gtcgaatcat tactccgacc
     4861 gccccacccc cgaggcggtg ctgttggtgc cagctttcgg tcgtcgcccg gttccccgag
     4921 ccggcgccgg cctcgaggag tgcagtgtga agcgcatccc ggcgcgccgg gccgctctcg
     4981 tggcggcggc gctcgtcctc tcgacgctcg tccccggcct cggcgcggcc gccggcgcct
     5041 ccgacccgac cgtggccg
//
LOCUS       DATGJT010000494         2102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1104669, whole genome shotgun sequence.
ACCESSION   DATGJT010000494 DATGJT010000000
VERSION     DATGJT010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1104669"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..869)
                     /locus_tag="VKX24_08460"
     CDS             complement(<1..869)
                     /locus_tag="VKX24_08460"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLJ08556.1"
                     /translation="MSAGSAADILAAVVAAKPGGETRPGQEAMCAAVDAALASGEHLL
                     VEAPTGVGKSLAYLAPAVAHTRGGGDARVVVVTATKALQEQLIRDDLPSVAAAVPAGR
                     PLRFAMLKGRSNYLCRAKLDVTMTDGVEARLDFGDDGLAGALEAVKGLEAWAGETDTG
                     DRADAPGAVSDAVWSQVSVDPGECPGAAACHAGDACFAEAARESAAAADVVVVNSHLY
                     AAHLASGGNVLPPHTAVVFDEAHTLEDTFAEAFGVRLTPFRVRRAAARARTAGADSDL
                     TRRLERAADALDTA"
     gene            complement(866..1525)
                     /locus_tag="VKX24_08465"
     CDS             complement(866..1525)
                     /locus_tag="VKX24_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007828730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08557.1"
                     /translation="MSPSPVRLLIVDDHPVVRQGLRAFLATRADFDVVGEAGDGEAAV
                     AEAARLRPDVILMDLVMPGLDGLEAIGRIRAADPAARILVLTSFASEEQVLPALRRGA
                     AGYLLKDAAPAELEAAIRAVHRGDGLLDPAVTRTVLAEVVRPEPGAAADQGLEALTPR
                     EREVLGLLGRGMTNAAIARELFVAEKTVKTHVSSILAKLRLADRTQAALFAARHGLAP
                     S"
     gene            complement(1522..>2102)
                     /locus_tag="VKX24_08470"
     CDS             complement(1522..>2102)
                     /locus_tag="VKX24_08470"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08558.1"
                     /translation="SLNLTLEAAAARAAAPDPAATQEAIQEARALVDASLVELRTLIF
                     GLRPPALEADGLVGALRKHAELVGRAHAVPISVVDHRPPGAPGPGPEAEEELWRAAQE
                     ALSNAVRHAKASAVTVTVEADGSGRGTRLSVADDGVGFDPEARSIAARRLGLVSMRER
                     VEAVGGVFEIVSAPGRGTTVRASVPAGGGRRR"
BASE COUNT          250 a          834 c          788 g          230 t
ORIGIN      
        1 gcggtgtcga gggcgtcggc ggcccgctcc aggcgccggg tcagatcgga atcggcgccg
       61 gccgtgcggg cccgggccgc ggcccgccgg accctgaacg gcgtgagacg aaccccgaag
      121 gcctcggcga aggtgtcctc cagggtgtgg gcctcgtcga agacgacggc ggtgtggggc
      181 ggcagcacat tgccccccga ggccaggtgg gcggcgtaca gatggctgtt gaccacgacg
      241 acgtcggcgg cggccgccga ctcccgggcg gcctcggcga agcaggcgtc gccggcgtgg
      301 caggcggccg cgcccgggca ttcccccgga tcgaccgaga cctgcgacca cacggcgtcc
      361 gacaccgccc cgggggcgtc ggcgcgatcg cccgtgtcgg tctccccggc ccaggcctcc
      421 agccccttca ccgcttccag cgcccccgcc aagccgtcgt cgccgaaatc gagccgggcc
      481 tcgacaccgt cggtcatcgt cacgtccagc ttcgcccggc acaggtagtt ggaccggccc
      541 ttcagcatgg cgaagcggag cggccgcccc gccggcaccg ccgccgccac cgaaggcagg
      601 tcgtcgcgga tcagctgctc ctgcagcgcc ttggtggcgg tgacgaccac cacccgggcg
      661 tcgccgccgc cccgggtgtg ggccacggcc ggcgccaggt aggccaggct cttgcccacc
      721 ccggtcggcg cctcgaccag gaggtgctcg ccggacgcca gggcggcatc gaccgcggcg
      781 cacatcgcct cctgcccggg gcgggtctcg ccgcccggct tcgccgccac cacggcggcg
      841 aggatgtcgg ccgccgaccc cgcgctcacg acggcgccag cccgtgccgg gcggcgaaga
      901 gggcggcctg ggtgcggtcg gccagccgaa gcttggccag gatcgagctg acgtgggtct
      961 tcaccgtctt ctcggccacg aacagctccc gggcgatggc ggcgttggtc atgccccggc
     1021 cgagcaggcc gagcacctcc cgctcccggg gcgtgagcgc ctccaggccc tgatcggcgg
     1081 cggcccccgg ctccggccgg acgacctcgg ccagcacggt ccgcgtcacc gccgggtcga
     1141 gcagcccgtc gccccggtgc acggcccgga tggccgcttc gagctcggcg ggggcggcgt
     1201 ctttcaggag gtaccccgcc gccccccggc gcagggcggg gaggacctgc tcctccgagg
     1261 cgaagctggt cagcaccagg atccgggcgg ccgggtcggc ggcccggatg cggccgatgg
     1321 cctcaagccc gtcgaggccc ggcatcacga ggtccatgag gatcacgtcg gggcggagcc
     1381 gggccgcctc ggccaccgcc gcctccccgt cgccggcttc gccgaccacg tcgaagtcgg
     1441 ctcgggtggc gaggaacgcc cgcaggccct ggcgtaccac gggatggtcg tcgacgatga
     1501 ggagccggac gggcgacggg ctcaccgccg ccgcccccca ccggccggca ccgaggcccg
     1561 cacggtcgtc ccccggcccg gcgcggagac gatctcgaac accccgccga cggcctccac
     1621 ccgctcccgc atcgacacga ggccgagccg gcgggcggcg atcgaccggg cctcggggtc
     1681 gaagccgacg ccgtcgtcgg ccaccgacag ccgggtgccc cggccggacc cgtccgcctc
     1741 caccgtgacg gtcaccgccg acgccttggc gtggcgcacg gcgttggaca gcgcctcctg
     1801 cgccgcccgc cacagctcct cctcggcctc gggccccggc cccggcgcgc ccgggggccg
     1861 gtggtcgacg accgagatcg ggacggcgtg ggcccggccc acgagctcgg cgtgcttgcg
     1921 gagggcgccg acgagaccgt cggcctcgag ggcgggcggc cgcagcccga agatcagcgt
     1981 ccgcagttcg accagcgagg cgtcgaccag cgcccgggcc tcctggatcg cctcctgcgt
     2041 ggcggcgggg tcgggggcgg cggcccgtgc ggccgccgcc tccagcgtca ggttgaggct
     2101 ga
//
LOCUS       DATGJT010000495         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1104733, whole genome shotgun sequence.
ACCESSION   DATGJT010000495 DATGJT010000000
VERSION     DATGJT010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1104733"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1031)
                     /locus_tag="VKX24_08475"
     CDS             complement(<1..1031)
                     /locus_tag="VKX24_08475"
                     /inference="COORDINATES: protein motif:HMM:NF025168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing protein"
                     /protein_id="HLJ08559.1"
                     /translation="MMRAELEESGMRLQLRVGGKERVITVPEARVEQLRRFSGALKRG
                     PFVRRTWHELLFFLVDGALSALALAFVVVTLAAGAGLAVTFVGLIVLASCVRGARGIG
                     GFHRGLAKNLLGEQIEDPPPFVSRPGLFGWLQSALRDRTGWRAIAYSLIRAPLVAFGV
                     WFALSVWIDAFFCLTYPLLERGRVRPTEFGVVYNLFPPGFFSVGSDGVFHGLFIVATG
                     VVLLFLAPWPMRLLVSIDRRLMHVFLAPDALTARVRSLEQARAQTVDASAAVLRRIER
                     NLHDGTQAQLVAVAMRLGQAKEKLAEGDGVDLDQVRRLVTEAHQGAKDAIVELRDLAR
                     GIHPPVLDTG"
     gene            complement(1028..1819)
                     /locus_tag="VKX24_08480"
     CDS             complement(1028..1819)
                     /locus_tag="VKX24_08480"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HLJ08560.1"
                     /translation="MAQLIALDAPVRRYGFRQAAKSEMLKLSTLRSTLVTLAITVVGT
                     LTVTALAVNGDLSQARRPGFDPTNQSMTGLLIGMLTLGVLGALAVTGEYGTGAIRSSL
                     SATPRRPLFVLAKVSVVGALTLIAGEVLTFSCFGVGQLVLSAGGAPTAALSQPGVLRA
                     VLLTGAALPLFALLGLGLGFVVRNTAGAVASYAGLTFLLPFVFQRLPGDPSRFTPVPI
                     VANSVAAVVNQGPAQLAAPVGYALIALYVVVVLAVGAALMIRRDA"
     gene            complement(1831..>2099)
                     /locus_tag="VKX24_08485"
     CDS             complement(1831..>2099)
                     /locus_tag="VKX24_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08561.1"
                     /translation="PSAESFAALLREAGAGVESGVDGSMVVSGVSCADVGRMASHRSI
                     TLHELTPLRGSLEDAFMRLTHDAVEFQSTNRSAEIPVPATPARR"
BASE COUNT          352 a          714 c          801 g          232 t
ORIGIN      
        1 ccggtgtcga ggacgggggg gtggatgccg cgggcgaggt cgcgcagttc gacgatggcg
       61 tccttcgccc cctggtgggc ctcggtgacc agccggcgga cctgatcgag gtcgacgccg
      121 tcgccctcgg ccaacttctc cttggcctgg ccgagccgca tggccaccgc caccagctgg
      181 gcctgggtgc cgtcgtggag gttgcgctcg atgcgccgga gcaccgccgc cgacgcgtcc
      241 accgtctggg cgcgcgcctg ttccaaggac cggaccctgg cagtcagcgc gtcgggggcg
      301 aggaacacgt gcatgaggcg gcggtcgatc gagacgagca gccgcatcgg ccagggggcc
      361 aggaagagca ggacgacccc ggtggcgacg atgaacagcc catggaagac gccgtcgctg
      421 cccaccgaga agaaccccgg cgggaagagg ttgtagacca cgccgaactc ggttggccgc
      481 acccggcccc gctcgagcag ggggtaggtg aggcagaaga aggcgtcgat ccagacgctc
      541 agggcgaacc acaccccgaa ggcgaccagc ggggccctga tcagcgagta ggcgatggcc
      601 cgccagccgg tccggtcgcg cagggcgctc tgtagccacc cgaagagccc ggggcgcgag
      661 acgaacggcg gggggtcctc gatctgctca ccgagcaggt tcttggcgag cccccggtgg
      721 aacccgccga tgccgcgcgc cccccggaca caggaggcga ggacgatcag gcccacgaag
      781 gtgacggcga ggccggcgcc cgcggcgagg gtcacgacga cgaaggccag ggccagggcc
      841 gagagcgccc cgtccaccag gaagaacagg agctcgtgcc aggtccggcg gacgaacgga
      901 ccccgcttga gggcgcccga gaatcggcgc agctgctcga cccgcgcctc ggggacggtg
      961 atcacccgct ctttgccgcc aacccgcagc tgcaaccgca tccccgattc ctcgagctcg
     1021 gcccgcatca tgcgtcacgc cggatcatca gggcggcgcc gacggccagg acgaccacga
     1081 cgtagagggc gatcagggcg tatccgaccg gggcggcgag ctgcgccggt ccctggttga
     1141 cgaccgccgc caccgagttg gccacgatgg ggaccggggt gaagcgggac gggtccccgg
     1201 gcagacgctg gaaaacgaag gggaggagga atgtgagccc cgcgtaggag gcgacggcgc
     1261 ccgccgtgtt ccggacgacg aagccgagcc cgaggccgag cagcgcgaac aacgggaggg
     1321 cggccccggt cagtagcacg gcgcggagca ccccgggctg ggagagcgcc gccgtcgggg
     1381 ccccgccggc cgacaggacg agctggccga ccccgaagca ggagaaggtg agcacctcgc
     1441 cggcgatgag ggtgagagcg ccgacgacgg agaccttggc caggacgaag agcggccggc
     1501 ggggggtcgc cgacagcgac gaccggatgg ccccggtgcc gtactcgccg gtgacggcga
     1561 gggcgccgag cacgcccagg gtgagcatgc cgatgagcag tccggtcatc gactggttgg
     1621 tcgggtcgaa gcccggccgg cgggcctggc tcaggtcccc gttgacggcc agcgccgtca
     1681 cggtgagcgt cccgaccacg gtgatcgcga gggtcacgag ggtcgaacgg agggtcgaca
     1741 gcttgagcat ctcgctcttg gccgcctgcc tgaacccgta gcggcggacc ggggcgtcga
     1801 gcgcgatcag ttgggccaca tcgtcccctt tcatctccgg gccggggttg ccggcaccgg
     1861 gatctccgcg gagcggttcg tcgactggaa ctcgacggcg tcgtgggtga gccgcatgaa
     1921 cgcgtcctcg agcgaccccc gcaacggcgt gagctcgtgc agggtgatcg accggtggga
     1981 ggccatccga ccgacgtcgg cgcagctgac cccggagacg accatcgacc cgtcgacgcc
     2041 cgactccacg ccggcgcccg cttctcgcaa gagggcggcg aagctctccg ccgacgggg
//
LOCUS       DATGJT010000496         3841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1204459, whole genome shotgun sequence.
ACCESSION   DATGJT010000496 DATGJT010000000
VERSION     DATGJT010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3841
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1204459"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1543
                     /locus_tag="VKX24_08490"
     CDS             <1..1543
                     /locus_tag="VKX24_08490"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLJ08562.1"
                     /translation="APQGLFDPDEPADMAGVITAALGDTPTREALVAHTGTPPRTWAD
                     VARATASVYDLVSGTRRRPRHRHRNGAARPSGSSGRLRIAVVTPLPPQPSGVADYSYL
                     LLEELAEYAEITAFVDGPPHHRAEQRAARAPAGIPVLRTSALEQAESIGGAFDAVVYT
                     LGNSEFHTGALAALQRRPGIVYAHDVRLTDLYRFAPHQHPRALAARGPDAFHRTLHAL
                     YPGLPADLGAGGGISAEEADRYGVLMARQAVAASTHFLATSEYAATLARLDAGPKDRH
                     KVRALPLAIGVHAIDPGRRPADGNRNGPPVVASFGLVNERKQTGVLLDALAAVAGRHP
                     DARLAVVGPAGEAELAGLRARADRLGLAGRVEFTGRVEPAEYGRWLQRTTVAVQLRDH
                     TNGETSGAVGACLASGVPTVVTAIGPARELPTGSVAPLPAFARPEEVAAAIDELLGDP
                     NRQVALARAAQDYAATRTFGRTARRLYDFLVESAGAEAGARDDGDDTSPARNRSYRSS
                     TVSQR"
     gene            complement(1429..2673)
                     /locus_tag="VKX24_08495"
     CDS             complement(1429..2673)
                     /locus_tag="VKX24_08495"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLJ08563.1"
                     /translation="MRLLYVVQRYGREVAGGAETHCREFATRLAARGHDVEVLTSCAA
                     SHAGWANFYAEGTSTLDGVRVHRLPVARPRDEAFFARIDERVVWGVRPAPVHLQRRWL
                     EVLGPLVPDLGPWLTQRAAGYDAVIFFTYVFHTTWSGLPAAAGVAPTVLHPTAHDEPA
                     LGVRLYDLTFRHPAGFAFSTEEEAALVARRFRVRQPHAVIGIGTDLDAGARADEAAFR
                     AEVGLGERPYVVYVGRVEGGKGAVELFDWFLAYKRRRPGPLALVKVGAVVDDPGVHPD
                     VFMTGFVDDDRRTSALAGAVALVQPSYYESFSMVLTEAWAQRRPALVQGHCAVLEGQV
                     RRSGGGIPYRGYAEFEAALDGLLADPDLRRALGDAGRRYTEANYRWDTVLDRYERFLA
                     GLVSSPSSRAPASAPADSTRKS"
     gene            complement(2678..3757)
                     /locus_tag="VKX24_08500"
     CDS             complement(2678..3757)
                     /locus_tag="VKX24_08500"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ08564.1"
                     /translation="MEIHQVVVSAAPGDAVTDAALDLRGVLRRVGPSEVFARSVDESL
                     AGEVLPLAGYAARAGAALGRNVLVYHASVGDPEVCSFLLERPEKLVLMYHNIPPAEYF
                     LEVDPAFAALLADGRVELAALRPRVRLALAVSEYNAADLKALGYDDVRLSPLPVDTAA
                     LRARPSDPATVAHLDEHLRGPLVLSVGPVLPHRRPDLLLSAYHVLVTYLVPDAYLALV
                     GSCPQPGYRQVLESYRLQLNLHRAWLPGPVSREARAAWYRAAAVFVTVSEHEGVDAPL
                     LEAMAFDVPVVARAFAAIPETLGGAGLLLPPDGDPRLVAEALAEVLGSDETRRGLVAA
                     GRRRQAAVDPEGARAAFLAHLAGAV"
BASE COUNT          519 a         1487 c         1431 g          404 t
ORIGIN      
        1 tgcgccgcaa gggctcttcg accccgacga gcccgccgat atggccgggg tcatcaccgc
       61 agccctcggc gacacgccga cccgggaggc gctcgtcgcc cataccggga cgccgccgcg
      121 cacctgggcc gacgtggccc gggccaccgc ttcggtctac gacctcgtct ccggcacccg
      181 gcgccgaccc cgccaccgcc accgcaacgg cgcggcgcgc ccgtccggat cgagcgggcg
      241 actccgcatc gccgtggtga ccccgctgcc gccgcagcca tccggagtgg cggactacag
      301 ctatctgctc ctcgaggaac tggcggagta cgccgagatc accgccttcg tcgacgggcc
      361 gccccaccac cgggcggaac agcgggcggc ccgcgccccg gcggggatcc ccgtgctgcg
      421 gacgtcggcg ctggagcagg ccgagtcgat cggcggcgcc ttcgacgccg tcgtctacac
      481 gctgggcaac agcgagttcc acaccggcgc actggcggcg ctccagcggc ggcccggcat
      541 cgtctacgcc cacgacgtgc gcctcaccga tctgtaccgc ttcgctcccc accagcaccc
      601 ccgggcgctg gccgcccggg ggcccgacgc cttccaccgc acgctccacg ccctctatcc
      661 cggactgccc gccgacctcg gggcgggcgg cggcatcagc gccgaagagg ccgaccgcta
      721 cggcgtcctc atggcccgcc aggccgtcgc cgcctcgacg cacttcctgg ccacgtcgga
      781 gtacgccgcc acgctggccc gcctcgacgc cgggccgaag gaccgccaca aggtgcgggc
      841 cctcccgctg gccatcgggg tccacgccat cgaccccggc cggcggcccg ccgacggcaa
      901 ccgcaacggc ccgccggtcg tggccagctt cgggctggtg aacgagcgga aacagaccgg
      961 cgtgctgctc gacgccctcg ccgcggtggc cggtcggcac cccgacgccc ggctggcggt
     1021 cgtcggcccg gcgggcgagg cggagctggc cgggctgcgg gcccgggccg accgcctcgg
     1081 gctggcgggc cgggtcgagt tcaccggtcg ggtggagccc gcggagtacg gccggtggct
     1141 gcagcggacg accgtcgccg tccagctgcg ggaccacacc aacggcgaaa cgtccggagc
     1201 ggtcggcgcc tgtctcgcct cgggcgtacc gaccgtcgtg accgccatcg gaccggcccg
     1261 ggagctcccg acgggcagcg tcgctcccct cccggccttc gcccgtcccg aggaggtggc
     1321 ggcggccatc gacgagctgc tgggcgaccc gaaccggcaa gtggccttgg ctcgggcggc
     1381 gcaggactac gccgcgaccc ggaccttcgg gcgcaccgcc cgccggctct acgacttcct
     1441 ggtggagtcc gccggagccg aggccggcgc ccgcgacgat ggcgacgaca ccagcccggc
     1501 cagaaaccgc tcgtaccggt cgagcaccgt gtcccagcgg tagttggcct cggtgtagcg
     1561 ccgcccggcg tcccccagcg cccggcgaag gtcgggatcg gccaggagcc cgtcgagcgc
     1621 cgcctcgaac tcggcgtacc cccggtacgg aatcccgccg ccgctccggc ggacctgccc
     1681 ctcgaggacg gcgcagtggc cctggaccag cgccggccgc cgctgcgccc acgcctcggt
     1741 cagcaccatg gagaagctct cgtagtacga cggctgcacc agggcgacgg cgccggccag
     1801 ggccgacgta cgccggtcgt cgtcgacgaa gcccgtcatg aacacgtcgg ggtggacacc
     1861 ggggtcgtcg accaccgccc ccaccttcac gagggccagc ggtcccggac gccggcgctt
     1921 gtaggccaag aaccagtcga acagctcgac ggcgcccttg ccgccctcca cccgtccgac
     1981 gtagaccacg tagggccgct cgccgaggcc cacttccgcc cggaaggccg cctcgtcggc
     2041 ccgggcgccg gcgtcgagat cggtgccgat cccgatgacg gcgtggggct ggcgcacccg
     2101 gaaccgccgg gccaccagcg ccgcctcctc ctcggtggag aaggcgaacc ccgccgggtg
     2161 gcggaaggtg aggtcgtaga ggcggacgcc gagcgccggc tcgtcgtggg ccgtcgggtg
     2221 cagcacggtg ggcgccaccc cggcggcggc cggcagcccg gaccaggtgg tgtggaagac
     2281 gtaggtgaag aagatcaccg cgtcgtagcc ggcggcccgc tgcgtgagcc aggggccgag
     2341 atccgggacg agcgggccca gcacctccag ccagcgccgc tggaggtgga cgggcgccgg
     2401 ccgaacgccc cacaccaccc gctcgtcgat ccgggcgaag aacgcctcgt cgcggggccg
     2461 ggcgaccggc agccggtgca cccggacgcc gtcgagggtg ctcgtccctt cggcgtagaa
     2521 gttggcccag ccggcgtggc tggcggcgca ggacgtcagc acctcgacgt cgtggcccct
     2581 ggcggcgagg cgggtggcga actcccggca gtgggtctcg gccccgccgg ccacctcccg
     2641 gccgtagcgt tggaccacgt agagcagccg caccggttca gaccgccccg gccaggtggg
     2701 cgaggaaggc cgcccgggcg ccctccgggt cgaccgcggc ctgccgccgc cggccggcgg
     2761 cgacgaggcc ccggcgggtt tcgtcgctgc cgagcacctc ggccagcgcc tcggccacca
     2821 gccgcgggtc gccgtcgggt ggcaggagca ggccggcgcc gccgagggtc tcgggaatgg
     2881 cggcgaaggc ccgggcgacc accggcacgt cgaaggccat cgcctccagc agcggcgcat
     2941 cgacgccttc gtgctcggag acggtgacga acaccgccgc ggcccggtac caggcggccc
     3001 gcgcctcccg gctcaccggg cccggcagcc aggcccggtg gaggttgagc tgcaggcggt
     3061 aggactccag cacctgccgg taacccggct ggggacacga cccgaccagc gccaggtagg
     3121 cgtcgggcac caggtaggtc acgagcacgt ggtaggccga cagcaggagg tcgggccgcc
     3181 gatggggcag gaccggtccg acggagagga cgagcgggcc ccggaggtgc tcgtcgaggt
     3241 gggccacggt ggcggggtcg gacggccgcg cccgcagggc ggcggtgtcg accgggagcg
     3301 gcgagaggcg gacgtcgtcg tagccgagcg ccttgagatc ggcggcgttg tactccgaga
     3361 cggccagcgc caggcgcacc cggggccgca gcgccgccag ctcgacccgg ccgtcggcca
     3421 gcagggcggc gaaggcggga tcgacctcga ggaagtactc cgccggcggg atgttgtggt
     3481 acatgagcac gagcttctcg gggcgttcga ggaggaagga gcacacctcc ggatcgccga
     3541 cggaggcgtg gtagacgagg acgttgcgcc cgagcgccgc ccccgcccgg gcggcgtagc
     3601 cggccagggg gaggacctcg ccggccaggg actcgtcgac ggaacgggcg aagacctccg
     3661 acggaccgac ccgccgcagc acgccccgca gatcgagggc cgcatcggtc acggcgtcgc
     3721 ccggcgccgc cgaaacgacg acctggtgga tctccacgcc ccggccggtc aatcccccgg
     3781 gtcgcccgcc gacgccccgc cgcggccgcc ggccgggcgc tcggcggcct ggtgcccggc
     3841 g
//
LOCUS       DATGJT010000497         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_67076, whole genome shotgun sequence.
ACCESSION   DATGJT010000497 DATGJT010000000
VERSION     DATGJT010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67076"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2035
                     /locus_tag="VKX24_08505"
     CDS             <1..>2035
                     /locus_tag="VKX24_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018439285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HLJ08565.1"
                     /translation="NDGFNRLVLGAGLTGREVAILRAYSKYLRQVGSAFSQAYMERTL
                     AGNPHIARLLVELFHARFDPARLPDPEDEASGLGKRLEAAIDAVASLDEDRILRSFLA
                     LVQATLRTNWFQSHPAGHPVAFKLDPAQVPDLPLPRPRYEIFVCSPRVEGVHLRGGRV
                     SRGGLRWSDRREDFRTEVLGLMKAQMVKNAVIVPVGAKGGFVLKRPPAAPAGGTADRE
                     ALAAEVAACYRDFVSALLDLTDNIAGGEVVHPPAVYAYDSDDPYLVVAADKGTATFSD
                     LANSISAEYGFWLGDAFASGGSSGYDHKKMGITAKGAWESVKRHFRDFGVDADTAPIT
                     VAGIGDMSGDVFGNGMLCSRSLRLVAAFDHRHVFIDPDPDPERSAAERERLFNLARSS
                     WADYDPSVISAGGGVFPRSAKAIPLSPEARAALGTDADVLRPAELIKAVLRAPVDLLW
                     NGGIGTYVKASTETHGDAGDKANDAVRIDAGELRARVVGEGGNLGFTQRARVEYALAG
                     GRINTDAIDNSAGVDCSDHEVNIKILLDAVVADGEMTGRQRDRLLAEMTDEVAAMVLR
                     DNYDQTGALAVARAQAAAMVDVHTRYLRKLESEGSLDRAIEFLPGDDVLAQRRSARTG
                     LTTPEFAVLLAYTKLDVAHRLLASDACEDPWFERELVAYFPTPLREDRFAAARA"
BASE COUNT          279 a          766 c          720 g          270 t
ORIGIN      
        1 gaacgacggc ttcaaccggc tggtgctcgg cgcgggcctc accggccggg aggtggcgat
       61 cctccgggcc tacagcaagt acctccgcca ggtcggttcg gcgttctccc aggcctacat
      121 ggagcggacg ctggccggca acccccacat cgcccggctg ctggtcgagc tgttccacgc
      181 ccgcttcgac ccggcccgcc tgcccgaccc ggaggacgag gccagcgggc tgggcaagcg
      241 gctggaggcg gccatcgacg ccgtcgccag cctcgacgag gaccggatcc tgcggtcgtt
      301 cctggccctg gtgcaggcga ccctgcggac gaactggttc cagagccacc cggccggcca
      361 cccggtggcc ttcaagctcg acccggccca ggttccggac ctgccgctgc cccggccgcg
      421 ctacgagatc ttcgtgtgct cgccccgggt ggagggcgtc cacctccggg gcgggcgggt
      481 gagccggggg ggcctgcggt ggtcggaccg ccgggaggac ttccgcaccg aggtcctcgg
      541 cctcatgaag gcgcagatgg tgaagaacgc cgtcatcgtg ccggtgggcg ccaagggcgg
      601 cttcgtgctg aagcgcccgc cggccgcccc cgccggcggc acagccgacc gggaggccct
      661 cgccgccgag gtggcggcct gctaccgcga cttcgtttcg gcgctgctcg acctgaccga
      721 caacatcgcc ggcggcgagg tcgtgcaccc gccggcggtc tacgcctacg acagcgacga
      781 cccgtatctg gtcgtggcgg ccgacaaggg gacggcgacg ttctccgacc tcgccaactc
      841 catctcggcg gagtacgggt tctggctcgg cgacgccttc gcctcgggcg gctcgtcggg
      901 ctacgaccac aagaagatgg ggatcaccgc caagggcgcc tgggaatcgg tgaagcgcca
      961 cttccgggac ttcggcgtcg acgccgacac cgccccgatc accgtcgcgg gcatcggcga
     1021 catgtcgggc gacgtgttcg gcaacgggat gctgtgctcc cggtccctgc ggctcgttgc
     1081 ggcgttcgac caccgccacg tcttcatcga ccccgacccc gaccccgagc gcagcgccgc
     1141 cgaacgggag cgcctgttca acctggcccg ctcgtcgtgg gccgactacg acccctcggt
     1201 catctcggcc gggggcggcg tctttccccg ctcggccaag gcgatcccgc tgtcgcccga
     1261 ggcccgggcg gcgctcggca ccgacgccga cgtcctccgg cccgcagagc tcatcaaggc
     1321 cgtgctgcgg gcgccggtcg acctcctgtg gaacggaggc atcgggacgt atgtgaaggc
     1381 gtcgaccgag acgcacggcg acgccggcga caaggccaac gacgccgtcc gcatcgacgc
     1441 cggggagctg cgggcccggg tggtgggcga gggcggcaac ctcggcttca cgcagcgggc
     1501 ccgcgtcgag tacgccctgg ccggcgggcg gatcaacacc gacgccatcg acaactcggc
     1561 cggcgtcgac tgctccgacc acgaggtcaa catcaagatc ctgctcgacg ccgtcgtggc
     1621 cgacggcgag atgaccggcc gccagcggga ccggctcctg gccgagatga ccgacgaggt
     1681 ggcggccatg gtgctgcggg acaactacga ccagaccggg gcgctggccg tcgcccgggc
     1741 ccaggcggcg gcgatggtcg acgtccacac ccggtacctc cgcaagctgg agagcgaggg
     1801 gtccctcgac cgggcgatcg agttcctgcc cggcgacgac gtcctcgccc agcggcgctc
     1861 ggcccgcacc ggcctcacga cgccggagtt cgcggtgctg ctggcctaca ccaagctcga
     1921 cgtcgcccac cggctgctgg cctccgacgc ctgcgaggac ccctggttcg agcgggagct
     1981 cgtcgcctac ttcccgaccc cgctgcggga ggaccgcttc gccgccgccc gggcc
//
LOCUS       DATGJT010000498         3128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_793743, whole genome shotgun sequence.
ACCESSION   DATGJT010000498 DATGJT010000000
VERSION     DATGJT010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793743"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="VKX24_08510"
     CDS             <1..503
                     /locus_tag="VKX24_08510"
                     /inference="COORDINATES: protein motif:HMM:NF024945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ08566.1"
                     /translation="DVLEGDVVGVAPRPPSLDGPIGVVGVGPPADLTAIEPSYATASR
                     VLEVAERFGLPGVHRLEDLSLRVAVAAEDELGEVLVGRYLRPLQKLGVRAAAVLETVA
                     AFIEHGLSVKATAEALDVHQNTVRYRLGRFEELTGASLERPVTAFEVWWAMQRDWLMS
                     QGGAKL"
     gene            619..1377
                     /locus_tag="VKX24_08515"
     CDS             619..1377
                     /locus_tag="VKX24_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ08567.1"
                     /translation="MAELEGKRALVTGGAQGLGKAIATLFVERGAKVMISDIDEAGAK
                     LAADELGESARAVRCDVTQESEHEAAVQATVDAFGGLDIMVNNAGIEVVKPLFHHTEQ
                     EFDAIYNINVKGVWFGMKAALAALPQPGGVIVNMASLAGLGGVPLFGAYSMSKAGVVQ
                     LTRCAATELKPMGIRINAVCPAFIATAMVDRLKPIVTEIVGVPFDDLAAMKQGRVGTP
                     EEVAEMVAFLASDDSSFCTGGTYVLDGGLQAAML"
     gene            1377..2147
                     /locus_tag="VKX24_08520"
     CDS             1377..2147
                     /locus_tag="VKX24_08520"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003940866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HLJ08568.1"
                     /translation="MGGLLEGKVAIVTGAAKGIGRAIAEAYAAQGATVVVSDIDEGMA
                     KETASRIPGASDIACDVRSEEQVKSLVDQTVAQHGGLQIMVPNAGIGRPVPLLGMDYE
                     EWRAVTSVNLDGVFLCIRYGAPAIIASGGGAIVNICSITAQAGTPLIAHYSAAKAGVM
                     SLTQTAAVELRAQGVRVNAVLPGFIETEMVTSVKGDFERLLGFPEGQFDQVIAMKQGR
                     YGTAEEVAKMAVFLASDRSSFSNGSPFVLDGGCRASLL"
     gene            complement(2208..2534)
                     /locus_tag="VKX24_08525"
     CDS             complement(2208..2534)
                     /locus_tag="VKX24_08525"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HLJ08569.1"
                     /translation="MARALIGEKLIDREGNTVGKITDVIVDSASLENEWITVKTGMMG
                     GEHLVPIAAVEEHGNQIQVPFAKDDVKSAPTVDKGHAAPSPSEREQVFSHFGMADPGP
                     PPHSSM"
     gene            complement(2615..>3128)
                     /locus_tag="VKX24_08530"
     CDS             complement(2615..>3128)
                     /locus_tag="VKX24_08530"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HLJ08570.1"
                     /translation="SLQGAVAAGLLGAGNVFLGVVEDTARFLAAIIADDADNPADAAE
                     RAVRTEIAARRRIPGLGHPVHKAEDPRTPRLYAIAREADIPTPHLELLRTVADAHAAA
                     TGKALPINGAGAAGAAWADLGFPPAIVRGFALLARTAGLVGHLAEEMEHPIGMRLWLD
                     VEERATPIED"
BASE COUNT          432 a         1021 c         1195 g          480 t
ORIGIN      
        1 tcgacgtcct ggagggcgac gtggtcggcg tcgcgccccg accgccttcg ctcgacgggc
       61 ccatcggcgt cgtcggcgtc ggcccgccgg ccgatctgac ggccatcgag ccgtcctatg
      121 ccaccgccag ccgggtgctg gaggtggcgg aacgcttcgg actgcccggc gtgcaccggc
      181 tggaggacct gtcgctgcgg gtcgccgtgg ccgccgagga cgagctgggc gaggtgctgg
      241 tgggccgcta cctccggccg ctccagaagc tcggcgtgcg ggcggcggcg gtgctcgaga
      301 ccgtggccgc cttcatcgag cacgggctgt cggtcaaggc caccgccgag gcgctcgacg
      361 tccaccagaa caccgtgcgg taccggctcg gccggttcga ggagctgacc ggcgcctcgc
      421 tggagcggcc ggtgacggcc ttcgaggtgt ggtgggccat gcagcgggac tggttgatgt
      481 cgcagggcgg agcgaagttg taggggtctc caaagcaagc tggccttctc tagcgaccgc
      541 tctgtggacg agcggaagac ggtggggaaa gctgggcggc ggttctccaa cgtcccctcg
      601 acacgaaagg agatggcgat ggcggaactg gagggtaaga gggcgctggt gacgggtggc
      661 gcccagggcc tgggtaaagc catcgccacc ttgttcgtcg agcgcggcgc caaggtcatg
      721 atctccgaca tcgacgaggc gggcgccaag ctggcggccg acgaactcgg cgagtcggcc
      781 cgggccgtgc gctgtgacgt cacgcaggag tcggagcacg aggcggcggt gcaggcgacc
      841 gtcgacgcct tcggcgggct cgacatcatg gtcaacaacg ccggcatcga ggtcgtcaag
      901 ccgctgttcc accacacgga gcaggagttc gacgccatct acaacatcaa cgtgaagggc
      961 gtgtggttcg gcatgaaggc ggcgctggcg gcgctgcccc agccgggcgg cgtcatcgtc
     1021 aacatggcgt cgctggccgg cctcggcggc gtgcccctgt tcggcgccta ctcgatgtcg
     1081 aaggccggcg tggtccagct cacccggtgc gcggccaccg agctcaagcc catgggcatc
     1141 cggatcaacg cggtgtgccc ggcgttcatc gccaccgcca tggtcgaccg gctgaagccg
     1201 atcgtgaccg agatcgtcgg cgtcccgttc gacgacctgg cggccatgaa acagggacgg
     1261 gtcggtactc cagaggaggt ggcggagatg gtggccttcc tggcctcgga tgactcttcg
     1321 ttctgcaccg gcgggaccta cgtcctcgac ggcggtctcc aggcggcgat gctgtgatgg
     1381 gcgggctcct ggaaggcaag gtcgccatcg tcaccggcgc ggccaagggc atcggcaggg
     1441 cgatcgccga ggcctacgcc gcgcagggcg ccacggtggt cgtgtcggac atcgacgagg
     1501 gaatggccaa ggagacggcg tcccggatcc cgggggcgtc ggacatcgcc tgcgacgttc
     1561 gcagcgagga gcaggtcaag agcctcgtcg accagaccgt ggcccagcac ggcgggctgc
     1621 agatcatggt gccgaacgcc gggatcgggc gccccgtccc gctgctgggc atggactacg
     1681 aggagtggcg ggcggtgacg tcggtcaacc tcgacggcgt gttcctctgc atccgctacg
     1741 gcgcaccggc catcatcgcc tccggcggcg gcgccatcgt caacatctgc tcgatcacgg
     1801 cccaggccgg cacaccgctg atcgcccact actcggcggc caaggccggc gtgatgtcgc
     1861 tgacccagac ggcggcggtg gagctgcggg cccagggcgt tcgggtcaac gccgtcctgc
     1921 ccggcttcat cgagacggag atggttacct ccgtgaaggg cgatttcgag cggctgctcg
     1981 gcttcccgga gggccagttc gaccaggtca tcgccatgaa gcagggccgc tacggcacgg
     2041 ccgaggaggt ggccaagatg gccgtcttcc tggcctcgga ccggtcgagc ttctcgaacg
     2101 gcagcccgtt cgtgctcgac ggcggctgcc gggcctcgct gctgtagatc gcggttctcg
     2161 tcggccggcc gcccgggttc cccctcccgg gcggccgcgg cgcgccgtta catcgaggag
     2221 tgcggcggcg ggccggggtc ggccatgccg aagtgggaga acacctgctc gcgctcgctg
     2281 ggcgacgggg cggcatggcc cttgtcgacg gtgggagcgc ttttcacgtc gtctttggcg
     2341 aacggcacct ggatctgatt gccgtgctcc tcgacggcgg cgatggggac gagatgctct
     2401 ccgcccatca tgccggtctt gaccgtgatc cactcgttct ccagcgacgc ggagtcgacg
     2461 atgacgtcgg tgatcttgcc gacggtgttg ccttcccggt cgatcagttt ctccccgatg
     2521 agggcgcgcg ccatcagtga gcctccttgg tcgagcctcc cggtttccta cccccgaacg
     2581 ccggatggag aacccggccg ccgacggcgc cgcgctagtc ctcgattggg gtggcccgct
     2641 cttcgacgtc gagccagagg cgcatcccga tcgggtgctc catctcctcg gcgaggtggc
     2701 cgacgaggcc ggcggtgcgg gccagcaggg cgaatccccg gacgatggcc ggggggaagc
     2761 cgaggtcggc ccaggcggcg ccggcggccc cggcgccgtt gatcgggagg gccttgccgg
     2821 tggcggcggc gtgggcgtcg gcgacggtgc ggaggagctc gagatgcggg gtggggatgt
     2881 ccgcctcccg ggcgatggcg tagaggcggg gcgtgcgggg gtcctccgcc ttgtggacgg
     2941 ggtggccgag gccgggaatg cgccgtctgg cggcgatctc cgtccgcacg gcccgttcgg
     3001 cggcgtcggc ggggttgtcg gcgtcgtcgg cgatgatcgc ggcgaggaac cgggcggtgt
     3061 cctcgacgac gccgaggaag acgttgccgg cgccgaggag cccggcggcc accgcgccct
     3121 ggagggag
//
LOCUS       DATGJT010000499         2720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_170685, whole genome shotgun sequence.
ACCESSION   DATGJT010000499 DATGJT010000000
VERSION     DATGJT010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170685"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VKX24_08535"
     CDS             <1..828
                     /locus_tag="VKX24_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798712.1"
                     /note="back-translocating Elongation Factor EF4; binds to
                     the ribosome on the universally-conserved alpha-sarcin
                     loop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HLJ08571.1"
                     /translation="TFEPESSGALGFGFRCGFLGLLHMEIVRERLEREFDLDLLITVP
                     SVAYEVVKMGGEVISVHNPAEMPDPGSILEIREPLAAAMIITPSEFLGTLMELCQERR
                     GEMVEMHYLSENRVEIRYHLPLAEMIVDFFDQLKSRTRGYGSLDYEPIGYRAENLVKV
                     EILLHGEPVDAFSAIVHRDRAQSYGRKMVDKLRELVPRQMFDVAVQAAIGSRIIARET
                     IRARRKDVLAKCYGGDITRKRKLLEKQKAGKRRMKQVGSVEIPQEAFMAALRLDDKK"
     gene            825..1994
                     /gene="hemW"
                     /locus_tag="VKX24_08540"
     CDS             825..1994
                     /gene="hemW"
                     /locus_tag="VKX24_08540"
                     /inference="COORDINATES: protein motif:HMM:TIGR00539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HLJ08572.1"
                     /translation="MSAPAVALAPLPTAPARSPGRGVYVHIPFCLVHCPYCDFNAHAG
                     MEDVKAPYVAALIAEIEAAADGGPVDTIAFGGGTPTELAPAELGRILAALRSSFAVAG
                     GAEIGLEANPESIDRAGLDALLHAGFTRVSLGVQSLTPAVLRWLGRAHSPSRALGALR
                     DAVAAGFEHVNGDLMFGTPGESPADWRASLEGVLETGVDHVSTYALTVEEKTPLATWV
                     ARGRVAAPDDDEQADRYQAAAEVIRSAGLVRYEVSNWARPGCWSRHNVGYWTGAGYLG
                     FGAGAHSLAAGRRWWNVRSPRSYVARSPAVEEDSELLAPEERAAEAAMLGLRLAGGID
                     RAAFAAVWGVDPGQRWAEELSAAAGLRLVSVTPERVALTEEGFFLWGHVARSLLG"
     gene            complement(2036..2656)
                     /locus_tag="VKX24_08545"
     CDS             complement(2036..2656)
                     /locus_tag="VKX24_08545"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HLJ08573.1"
                     /translation="MAALLFDLDGVLVDSLKAYREAWTAWAEAYGVTREEFPTDIHGL
                     RPKDVIVRLRPGEPRAVEDFDAIFDGPAARDVMAMPGAAALTAALDGRPWAIVSSSQR
                     RHVAAALRGAGIADPPVLICGDDIAVGKPDPSCFLLAAERLGVDPSGCVVIEDAPSGL
                     AAARAAGMASVAVATTHDPDSLTGADRVFPSLAEAAPYLLGLFIGC"
BASE COUNT          383 a          959 c         1013 g          365 t
ORIGIN      
        1 accttcgaac ccgagtcgtc gggtgccctc ggcttcggct tccgctgcgg gttcctcggg
       61 ctgctgcaca tggagatcgt gcgcgagcgc ctcgagcggg agttcgacct cgacctgctg
      121 atcacggtgc cgagcgtggc ctacgaggtc gtgaagatgg gtggggaagt gatctcggtg
      181 cacaacccgg ccgagatgcc cgaccccggg tcgatcctcg agatccggga gccgctggcc
      241 gccgccatga tcatcacgcc gtcggagttc ctcggcacgc tgatggagct gtgccaggag
      301 cgccgcggcg agatggtgga gatgcactac ctctcggaga accgggtcga gatccgctac
      361 cacctgccgc tggccgagat gatcgtcgac ttcttcgacc agctgaagag ccggacccgg
      421 ggctacgggt cgctcgacta cgaaccgatc gggtaccggg ccgagaatct ggtgaaggtg
      481 gagatcctgc tccacggcga gccggtcgac gccttcagcg ccatcgtcca ccgggaccgg
      541 gcgcagagct acgggcggaa gatggtcgac aagctccgcg agctcgtgcc ccggcagatg
      601 ttcgatgtgg cggtccaggc ggcgatcggg agccggatca tcgcccggga gacgatccgt
      661 gcccggcgca aggacgtgct ggccaagtgc tacggcggcg acatcacccg caagcggaag
      721 ctgctggaga agcagaaggc gggcaagcgg cggatgaagc aggtgggctc ggtcgagatc
      781 ccgcaggagg cgttcatggc ggccctgcgc ctggacgaca agaagtgagc gcgccggcgg
      841 tggcgctggc gccgctgccc accgcccccg cccggtcgcc cggccgaggc gtgtacgtcc
      901 acatcccgtt ctgcctcgtc cactgcccgt actgcgactt caacgcccac gccgggatgg
      961 aggacgtgaa ggcgccctac gtggccgccc tgatcgccga gatcgaggcg gctgccgacg
     1021 gcggcccggt cgacacgatc gccttcggcg gcgggacccc gaccgagctg gcgccggcgg
     1081 agctcggtcg catcctggcg gcgctgcggt cgtccttcgc ggtggcgggc ggggcggaga
     1141 tcgggctgga ggccaacccg gagtcgatcg accgggccgg gctcgacgcc ctgctccacg
     1201 ccggcttcac ccgggtgagc ctcggcgtgc agtcgctgac cccggcggtg ctgcgctggt
     1261 tgggccgggc gcacagcccc tccagggcgc tcggtgccct gcgcgacgcc gtggccgccg
     1321 gcttcgagca cgtcaacggg gacctgatgt tcgggacgcc gggcgagtcg ccggcggact
     1381 ggcgggcgag cctcgagggc gtcctggaga ccggggtcga ccacgtctcc acctacgcgc
     1441 tcacggttga ggagaagacc ccgctggcga cctgggttgc ccggggccgg gtcgccgccc
     1501 cggacgacga cgagcaggcc gaccgctacc aggcggccgc cgaggtgatc cgctcggcgg
     1561 gcctggtgcg ctacgaggtc tccaactggg cgcggccggg gtgctggtcg cgccacaacg
     1621 tcggctactg gacgggggcc gggtacctcg gcttcggcgc cggggcgcac tcgctcgccg
     1681 ccggccgccg gtggtggaac gtgcgctcgc cgcggagcta cgtcgcccgg tcaccggcgg
     1741 tcgaggagga ctcggagctg ctggcgcccg aggagcgggc ggccgaggcg gcgatgctcg
     1801 gcctgcgcct cgccggtggc atcgaccggg ccgctttcgc cgcggtgtgg ggcgtcgacc
     1861 cggggcagcg ctgggcggag gagctgtcgg cggccgccgg cctgcgcctg gtctcggtca
     1921 ccccggagcg ggtcgccctg accgaggagg gcttcttcct ctggggccac gtcgcccgct
     1981 cactcctcgg gtagcgaggc accttcattg ggtgaaaacg caccataatg atccctcagc
     2041 acccaatgaa cagcccaagc aagtaaggag cagcctcggc gaggctcggg aagacccggt
     2101 ccgccccggt gagcgaatcg ggatcgtgcg tggtcgccac cgcgacggac gccatccccg
     2161 ccgcccgggc ggcggcgagc cccgacgggg cgtcctcgat cacgacgcac ccggagggat
     2221 cgacgcccag ccgttcggcg gcgagcagga agcaggaggg gtccggcttg cccaccgcga
     2281 tgtcgtcgcc gcagatcagc accgggggat cggcgatccc cgccccgcgc agggcggccg
     2341 ccacgtgccg gcgctgggac gaggagacga tcgcccacgg gcgcccgtcc agcgccgccg
     2401 tcagtgccgc cgcccccggc atcgccatca cgtccctggc cgccgggccg tcgaagatgg
     2461 cgtcgaagtc ctccaccgcc cgcggctcgc ccggtcggag ccggacgatg acgtccttcg
     2521 gccgcagccc gtggatgtcg gtcgggaact cctcccgggt cacgccgtag gcctcggccc
     2581 aggcggtcca ggcttcccgg taggctttga gcgagtcgac caggaccccg tcgaggtcga
     2641 acagcagcgc ggccatggcc cccgacggcg ggctcgccct agtgcacgcc gaccaggtcg
     2701 accacgaaga tcagcgtctc
//
LOCUS       DATGJT010000500         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_170831, whole genome shotgun sequence.
ACCESSION   DATGJT010000500 DATGJT010000000
VERSION     DATGJT010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170831"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..758)
                     /gene="mreC"
                     /locus_tag="VKX24_08550"
     CDS             complement(<1..758)
                     /gene="mreC"
                     /locus_tag="VKX24_08550"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HLJ08574.1"
                     /translation="MTYRRSKSRVVLAALLAAAVTIVTLGYRSGAGGPLHRIQSGALS
                     LVSPLQTGVTKVLSPIGNFFDSIGRIPTLSSQNSQLRAQNQQLRRELDQYAGTLQQLN
                     ADQALLGEKDWLTGQTVGAQVIGGGPSNQEWTVFLDKGADQGVAVGMAVVAADGLVGR
                     VTLVTGTSSKVLLLLDPTSAVGARLTTTGDTGLITGNGQGDLSLGLFDVTSTVATGEV
                     VVTSGYDNGIYPPGIPIGRVAGVHISDNGLSKVAS"
     gene            complement(892..1914)
                     /locus_tag="VKX24_08555"
     CDS             complement(892..1914)
                     /locus_tag="VKX24_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020546378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HLJ08575.1"
                     /translation="MFQFMGRDMAVDLGTANTLVYVRGRGIVLNEPSVVALNLKTGAV
                     LAVGAEAKRMIGRTPGHITAIRPLKDGVIADFDVTEKMLRYFIQKVHRRRVLAKPRVV
                     ICVPSGITGVEQRAVEEAAYAAGARSAHIIEEPMAAAIGAGLPVHEPAGNMVVDIGGG
                     TTEVAVISLGGIVTALSIRIGGDELDESIIAYIKKEYSLALGERTAEEIKMAIGSAFP
                     LPDEPNAEIRGRDLVTGLPKTIIVSSEEIRRSIEEPVNAIVDACKSTLDRTPPELAAD
                     IMDKGIVLTGGGALLKGLDERLKHETGMPVHLTETPLSCVAIGSGKCLEEFEALKPML
                     VASSRH"
BASE COUNT          302 a          723 c          730 g          332 t
ORIGIN      
        1 gaggccacct tgctgaggcc gttgtcgctg atgtgcaccc cggcgacccg cccgatcggg
       61 atgcccggag ggtagatgcc gttgtcgtag cctgaggtca cgacgacctc cccggtggcc
      121 accgtgctgg tcacgtcgaa caggccgagc gacaggtcgc cctggccgtt gccggtgatg
      181 aggcccgtgt cgccggtcgt cgtcagccgg gcaccgaccg cgctcgtcgg gtcgagcagc
      241 agcaacacct tggacgacgt gcccgtcacc agggtcaccc ggccaacgag gccatcggcg
      301 gcgacgaccg ccatgcccac ggcgacgccc tggtcggcgc ccttgtcgag gaaaaccgtc
      361 cactcctggt tcgacggtcc cccgccgatc acctgggccc ccacggtctg gccggtcagc
      421 cagtccttct ccccgaggag ggcctggtcg gcgttgagct gctgcagggt gccggcgtac
      481 tggtccagct cccggcggag ttgctggttc tgcgcccgga gctgggagtt ctggctgctg
      541 agggtgggga tccggccgat cgagtcgaag aagttcccga tcggcgacaa caccttcgtc
      601 accccggtct gcagcggcga caccaacgac agcgcgcccg actggatgcg gtgcagcggg
      661 ccgcccgctc cggagcggta gccgagggtg acgatggtga ccgcggcggc gagcagcgca
      721 gccagcacca cccgggactt ggaccttcgg tatgtcattc tcacagcgac ctcccgaagg
      781 gttcgagccg tgcagggcgg ttcggcggac caccccgagc gcaaattcta ccggccgggc
      841 ctacgccgcc gggtcgccgg gcgactcgcc gggacgggcg ggactcgtcg gtcagtggcg
      901 gctggatgcc acgagcatcg gcttgagcgc ctcgaattcc tccaggcact tgccggagcc
      961 gatcgccacg caggacaacg gggtttcggt caggtggacc ggcatgccgg tctcgtgctt
     1021 cagccgctcg tcgaggccct tcagcagcgc cccgccaccg gtcaggacga tgcctttgtc
     1081 catgatgtcg gcggcgagct cgggcggggt ccggtcgagc gtggacttgc aggcgtcgac
     1141 gatggcgttg accggctcct cgatcgagcg gcggatctcc tcggacgaca cgatgatcgt
     1201 cttcggcagg ccggtcacca ggtcacggcc ccggatctcg gcgttgggct catcgggcaa
     1261 cgggaaggcc gagccgatcg ccatcttgat ctcctcggcg gtgcgctcgc ccagggccag
     1321 cgagtactcc ttcttgatgt aggcgatgat cgactcgtcc agctcgtcgc cgccgatgcg
     1381 gatcgacaac gcggtgacga tgccgccgag cgagatcact gcaacctcgg ttgtgccccc
     1441 gccgatgtcg acgaccatgt tgccggccgg ctcgtggact ggcaggccag ccccgatcgc
     1501 cgcggccatc ggctcctcga tgatgtgcgc ggagcgggca ccggcggcgt aggcggcctc
     1561 ctcgaccgcc cgctgctcca ccccggtgat ccccgagggc acgcagatga ccacccgcgg
     1621 cttggccagc acccgccggc ggtgcacctt ctggatgaag tagcgcagca tcttctcggt
     1681 gacgtcgaag tcggcgatca cgccgtcctt cagcgggcgg atcgccgtga tgtggccggg
     1741 ggtgcgcccg atcatgcgct tggcctcggc accaacggcg agcaccgccc cggtcttcag
     1801 gttgagggca acgacggagg gttcgttcag gacgatgccc cgaccccgga cgtagaccag
     1861 ggtgttggcg gtcccgaggt ccaccgccat gtcgcggccc atgaactgga acatcttgtc
     1921 gagcggcaac gacgtctctc ctgctcgcgg gcggtgggga agcgacccgt gcgagccgtg
     1981 cccggccggc ctgcgcggtg atccggtgcg actggtgcgg cgttcctcgg cgcgggttcg
     2041 gggcccgcaa acccggggcc actaccctac gacattcggg gaaaacc
//
LOCUS       DATGJT010000501         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_584893, whole genome shotgun sequence.
ACCESSION   DATGJT010000501 DATGJT010000000
VERSION     DATGJT010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_584893"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /gene="trpB"
                     /locus_tag="VKX24_08560"
     CDS             complement(<1..957)
                     /gene="trpB"
                     /locus_tag="VKX24_08560"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011605797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HLJ08576.1"
                     /translation="MGKPGADGRFGEFGGRFVPEPLVPACMELEQAFDDAWADPAFRR
                     RLAETLASYGGRPTPLTECHRLSERLGVRIVLKREDLAHTGSHKLNNVVGQALLTERM
                     GKHRMIAETGAGQHGVAAATAAALLGLGCTVFMGEVDTKRQALNVFRMELLGAEVVTV
                     TSGSRTLKDAVNEALREWVATVEDTHYCVGSVMGPHPFPYMVREFQRVVGDEARGQCD
                     RLLGGPPDVVVACVGGGSNAAGTFSGFVDTGARLVGVEAAGGAAATNGVPGVLHGMRS
                     RLLQDEDGQILEAESISAGLDYPGIGPEHAHLGAIGRAEYATA"
     gene            complement(996..1685)
                     /locus_tag="VKX24_08565"
     CDS             complement(996..1685)
                     /locus_tag="VKX24_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HLJ08577.1"
                     /translation="MSGSPVVKICGITSEADALLAVGLGADALGFIFAPSPRQMTAGA
                     VSDIVKRLPEEILTVGVFRDESPRRVVEIANTVGLGAVQLHGHESIEDTQWVAARVRT
                     AIKAFSAGEPAIGRFEEFGCAFLLIDGASPGSGEVFDWRLAEGVADPGRLFVSGGLHA
                     GNVGQAIAHLRPYGVDVSTGVERAPGEKDPQKIDAFIKAARAAGDAVAAEHPGLPDES
                     EPAPYDWLRDR"
     gene            complement(1682..>2208)
                     /locus_tag="VKX24_08570"
     CDS             complement(1682..>2208)
                     /locus_tag="VKX24_08570"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HLJ08578.1"
                     /translation="APDDLVAAKAAARLPVLRKDFTVARADICDARLMGADAVLLIAA
                     ALDDAELDEFVGLAAVLGLDALVEVHDEAELDRALLAGARLVGVNQRDLRTFEVDRRR
                     AEQLVARIPGYVLAVAESGIRDADDAAALAAVGYEAVLVGETLVRAADRTGAVKALLG
                     HPIGPRPAVEVEPR"
BASE COUNT          283 a          823 c          826 g          276 t
ORIGIN      
        1 ggccgtcgcg tactcggccc gcccgatcgc cccgaggtgg gcgtgctcgg ggccgatgcc
       61 cgggtagtcg aggccggcag agatcgactc ggcctcgagg atctggccgt cctcgtcctg
      121 gaggagacgc gagcgcatcc cgtggaggac gccggggacg ccgttggtgg cggcggcgcc
      181 cccggccgcc tccaccccca ccagccgggc gccggtgtcg acgaaaccgg agaaggtgcc
      241 ggccgcgttc gagccgccgc cgacgcaggc gacgacgacg tcggggggac cgccgagcag
      301 ccggtcgcac tggccccggg cctcgtcgcc gaccacccgc tggaactcgc gcaccatgta
      361 ggggaagggg tgtggcccca tcaccgaccc gacgcagtag tgggtgtcct cgacggtcgc
      421 cacccactcg cgcagcgcct cgttcaccgc gtccttgagg gtcctgctgc cggaggtcac
      481 cgtcaccacc tcggcgccca ggagctccat gcggaacacg ttcaacgcct ggcgcttcgt
      541 gtcgacctcg cccatgaaca cggtgcagcc gagcccgagc agcgccgccg ccgtggccgc
      601 cgccaccccg tgctggccgg cgccggtctc ggcgatcatg cggtgcttgc ccatgcgctc
      661 ggtgaggagg gcctggccga cgacgttgtt cagcttgtgg ctgccggtgt gggcgaggtc
      721 ctcgcgtttc aggacgatgc gcaccccgag gcgctcggag agccggtggc actcggtgag
      781 cggcgtcggc cggcccccgt aggaggcgag ggtctcggcc agccgccgcc ggaacgccgg
      841 gtcggcccag gcgtcgtcga aggcctgctc gagctccatg caggccggga cgagcggctc
      901 ggggacgaag cgcccgccga actcgccgaa gcggccgtct gcgccgggct tccccatcaa
      961 cgaccggtcg ggggcggcct ccgaccctgg cgcgctcacc ggtcgcgcag ccagtcgtag
     1021 ggggcgggct cggactcgtc ggggaggccg gggtgctcgg cggcgaccgc gtcgcccgcg
     1081 gcgcgggccg ccttgatgaa ggcgtcgatc ttctgggggt ccttctcccc gggcgcccgc
     1141 tccaccccgg tcgagacgtc cacgccgtag gggcggaggt gggcgatggc ctgtccgacg
     1201 ttgccggcgt gcaggccgcc cgagacgaac agccggccgg ggtcggcgac cccctcggcg
     1261 aggcgccagt cgaacacctc gcccgaaccg gggctggccc cgtcgatgag gaggaaggcg
     1321 cagccgaact cctcgaaccg gccgatcgcg ggctccccgg cgctgaaggc cttgatcgcg
     1381 gtccggaccc gcgccgccac ccactgggtg tcctcgatcg actcgtggcc gtgcagctgc
     1441 acggccccca ggcccacggt gttggcgatc tcgacgaccc ggcgcgggga ctcgtctcgg
     1501 aacaccccga cggtcaggat ctcctcgggc agccgtttca cgatgtcgga caccgccccc
     1561 gccgtcatct ggcggggcga gggggcgaag atgaacccga gggcgtcggc gccgaggcct
     1621 acggccagca acgcgtcggc ctccgaggtg atcccgcaga tcttgaccac gggggagccg
     1681 ctcaccgggg ctcgacctcc acggccggcc gggggccgat cgggtgcccg aggagggcct
     1741 tgaccgcccc tgtgcggtcg gccgcccgca ccagggtctc gccgaccagg accgcctcgt
     1801 agccgactgc cgccagcgcg gcggcgtcgt ccgcgtcccg gatccccgac tcggcgacgg
     1861 cgagcacgta gccggggatg cgggccacga gctgctcggc ccgccgccgg tcgacctcga
     1921 aggtccggag gtcccgttgg ttgacgccga ccagccgggc cccggcgagg agggcccggt
     1981 cgagctccgc ctcgtcgtgg acctcgacca gggcgtcgag ccccaacacc gccgccaggc
     2041 ccacgaactc gtcgagctcg gcgtcgtcga gcgcggccgc gatcaagagg acggcgtcgg
     2101 cccccatgag gcgggcgtcg cagatgtcgg ctcgggccac cgtgaagtcc ttgcggagca
     2161 caggcagtcg ggcggccgcc ttggcggcga cgaggtcgtc gggcgcgc
//
LOCUS       DATGJT010000502         2953 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_170970, whole genome shotgun sequence.
ACCESSION   DATGJT010000502 DATGJT010000000
VERSION     DATGJT010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170970"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VKX24_08575"
     CDS             complement(<1..299)
                     /locus_tag="VKX24_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008474753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation protease"
                     /protein_id="HLJ08579.1"
                     /translation="MSTRILVAGVGNIFFTDDGFGCEVARRLAERALPDGVTVADFGI
                     KGVHLAYELLEGYDVAILIDAAPCGGEPGDLYLIEPKLEEIEESPLVRAASDGEQA"
     gene            complement(296..1861)
                     /locus_tag="VKX24_08580"
     CDS             complement(296..1861)
                     /locus_tag="VKX24_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017948940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08580.1"
                     /translation="MSFETSKAIANAVLYEGYVLYPYRASAAKNQVRWQFGVLAPKSW
                     SERGGPEPWEQQTQCLLEADDAAVLALRLRFLQVQVKAVQRALPGPGGYEDVESLWVD
                     GVEHIRFEEAVEHQQELQLALPGLLAGETRVTLSVEGAAEPAEPIVDATGAVAGRVVR
                     TRQPLQGRLIVSASPLDGPFGGYRLTVRTENHTPWDGDPGDRKAAMSHSFVACHTLMA
                     LTPAGAGHFIPLLDPPEWARPAAKACQNLHTYPVMIGDPARADELFSSPIILYDYPQI
                     APESPGDLFDATEIDEILILRTMTLTEEEKAEARATDPKAAAIIDRVDSMPPELLDRL
                     HGAVRYLESVTGRGTPPGTTPAKAPSGSAASWADQIPEMGTGSDGVPVFGEYRPFGEE
                     FADKRPAPTAFEQNGPMWDPADDPSVDPDTDTVHVAGVAIRKGSKVVLRPGARRSDAQ
                     DMFLAGKVADVQAVFSDLENKQFLAVTLEEDPNADLQVEHGRFLYFSPDEVEPVPGAR
                     GSGAAGAGMRQTR"
     gene            complement(1858..2511)
                     /locus_tag="VKX24_08585"
     CDS             complement(1858..2511)
                     /locus_tag="VKX24_08585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020129549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6084 family protein"
                     /protein_id="HLJ08581.1"
                     /translation="MSELVFDCIGAEADRDAAGPAISFALRIAETTGERVHAIALRIQ
                     IRIEPKKRRYSAAEAERLLDLFGETSRWGDTVKPMQFAFVDVMVPSFTGSIELDVEVP
                     VTYDLEVSSAKYFHSLDDGEIPLLMLFSGTVFTKGDTGFSVEQVPWHKEVSYRLPVKV
                     WDDVMEQHFPGKAWIRLDKETVDALSLFKSRRMFTNFDETLLALLGEAGGAEKEATT"
     gene            complement(2504..>2953)
                     /locus_tag="VKX24_08590"
     CDS             complement(2504..>2953)
                     /locus_tag="VKX24_08590"
                     /inference="COORDINATES: protein motif:HMM:NF040271.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5947 family protein"
                     /protein_id="HLJ08582.1"
                     /translation="KATWEQIQIPVSMAFFFYNSTMERFVAFYPSPAGATESLLDLDA
                     WSEVLANNPSFEGLMPDVEALIVKAEEDHFECYLVPIDSAYELTAVVRMNWKGFSGGQ
                     EVWEKIDNFFSTLRGRSAVVGLGPRGLRSLADSDEQASRGPGGAEGE"
BASE COUNT          430 a         1037 c         1031 g          455 t
ORIGIN      
        1 gcctgctcgc cgtcggacgc ggcccggacc aggggcgact cctcgatctc ctcgagcttg
       61 ggctcgatca ggtacaggtc gcccggctcg ccgccgcacg gggcggcgtc gatgaggatc
      121 gccacgtcgt agccctccag cagctcgtag gccaggtgca cgcccttgat gccgaagtcg
      181 gcgacggtca cgccgtccgg gagcgctcgc tcggccagcc gccgggccac ctcgcagccg
      241 aagccgtcgt cggtgaagaa gatgttgccc acgccggcga ccaggatgcg ggtgctcacc
      301 gcgtctgcct catcccggcg ccggccgctc cgctcccgcg ggccccgggg accggctcga
      361 cctcgtcggg ggagaagtag aggaaacgcc cgtgctcgac ctgcaggtcg gcgttgggat
      421 cctcctccag cgtcaccgcc aggaactgct tgttctcgag gtcggagaac accgcctgca
      481 cgtcggcgac cttgccggcc aggaacatgt cctgggcgtc cgagcgccgg gcgccgggcc
      541 tcagcaccac cttcgagccc ttccggatgg ccacgccggc gacgtggacg gtgtcggtgt
      601 cggggtcgac cgacgggtcg tcggcggggt cccacatcgg gccgttctgc tcgaaggcgg
      661 tcggcgccgg acgcttgtcc gcgaactcct caccgaaggg ccggtactcg ccgaagaccg
      721 gcacgccgtc ggaaccggtg cccatctcgg ggatctggtc ggcccaggag gcggcggagc
      781 cggacggtgc cttcgccggg gtggtgccgg gcggagtgcc ccgaccggtg accgactcca
      841 ggtaacgcac ggcgccgtgc aggcggtcga gcagctccgg gggcatcgag tccacgcggt
      901 cgatgatcgc cgccgccttg gggtcggtgg cccgggcctc ggccttctcc tcctcggtca
      961 gggtcatcgt ccggaggatc aggatctcgt cgatctcggt ggcgtcgaac aggtcgcccg
     1021 ggctctccgg ggcgatctgc gggtagtcgt acaggatgat cggggaggag aacagctcgt
     1081 cggcccgggc cgggtcgccg atcatcaccg ggtaggtgtg caggttctgg caggccttgg
     1141 ccgccggccg cgcccactcc ggggggtcga gcagcgggat gaagtggccg gcccccgccg
     1201 gggtgagcgc catcagcgtg tggcaggcga cgaacgagtg actcatcgcc gccttgcggt
     1261 cgcccgggtc accgtcccag ggcgtgtggt tctcggtgcg gacggtcagc cggtacccgc
     1321 cgaagggccc gtcgagcggg ctcgccgaca cgatcagccg cccctggagc ggctgccggg
     1381 tgcgcacgac gcggccggcg acggcgccgg tggcgtcgac gatcggctcg gccggttcgg
     1441 cggcgccctc caccgacagg gtcacccggg tctcaccggc caggagcccg ggcagggcga
     1501 gctgcagctc ctgctggtgc tcgaccgcct cctcgaaccg gatgtgctcg acgccgtcca
     1561 cccacagcga ttcgacgtcc tcgtagccgc cggggccggg cagcgcccgc tggaccgcct
     1621 tgacctggac ctggaggaag cgcagacgca gcgccagcac cgccgcgtcg tcggcctcga
     1681 gcaggcactg ggtctgctgc tcccagggct cgggcccgcc ccgttcgctc cagctcttcg
     1741 gggcgaggac gccgaactgc cagcgcacct ggttcttcgc cgccgaggcc cggtaggggt
     1801 agagcacgta gccctcgtag aggacggcgt tggcaatcgc tttcgaggtt tcgaagctca
     1861 cgtggtcgcc tccttctccg ccccgcccgc ttcgccgagc agcgccagca gcgtctcgtc
     1921 gaagttggtg aacatccggc gcgacttgaa caggctcagg gcgtcgacgg tctccttgtc
     1981 cagccggatc caggccttgc ccgggaagtg ctgctccatc acgtcgtccc agaccttgac
     2041 cggcagccgg taggagacct ccttgtgcca gggcacctgc tcgacggaga agccggtgtc
     2101 gcccttggtg aacaccgtcc cggagaacag catcagcagc gggatctcgc cgtcgtcgag
     2161 cgagtggaag tacttggccg aggacacctc gaggtcgtag gtcaccggca cctcgacgtc
     2221 gagctcgatc gacccggtga agctcgggac catcacgtcg acgaaggcga actgcatcgg
     2281 cttcaccgtg tcaccccacc ggctggtctc gccgaacagg tccagcagcc gctccgcctc
     2341 ggcggccgag tagcggcgct tcttgggttc gatccggatc tggatacgca acgcgatggc
     2401 gtggacccgc tccccggtcg tctccgcgat ccgcagcgca aaggagatcg ccgggccggc
     2461 cgcatcgcgg tccgcctcgg ctccaatgca gtcgaagaca agctcactca ccttctgctc
     2521 cgcccggccc acgcgacgcc tgctcgtcgc tgtcggcgag agaccggaga ccccgggggc
     2581 cgaggccgac gacggcgctt cgcccacgca gggtcgagaa gaagttgtcg atcttttccc
     2641 acacctcctg gccgccagag aagcccttcc agttcatcct caccaccgcg gtcagctcgt
     2701 aggccgaatc gatcgggacc aggtagcact cgaaatggtc ctcctcggcc ttgacgatca
     2761 gggcctcgac gtcgggcatc aggccttcga acgaggggtt gttggcgagc acctcgctcc
     2821 aggcgtccag gtcgagcagc gactcggtgg cgcccgccgg gctgggatag aaggcaacga
     2881 agcgttccat cgtcgagttg tagaagaaga aggccatgga gaccgggatc tggatctgct
     2941 cccaggtggc ctt
//
LOCUS       DATGJT010000503         2048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_274479, whole genome shotgun sequence.
ACCESSION   DATGJT010000503 DATGJT010000000
VERSION     DATGJT010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274479"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="VKX24_08595"
     CDS             complement(<1..680)
                     /locus_tag="VKX24_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014447676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HLJ08583.1"
                     /translation="MTETNGHATTTTNGHAGDGNGAAEPVTFTRKDFQSDQEVRWCPG
                     CGDYSVLAAVQFLLPELGVPPEKTVFVSGIGCSSRFPYYMETYGMHSIHGRAPAIASG
                     IAVSRPDLDVWVITGDGDGLSIGGNHLIHALRRNVNLTILLFNNQIYGLTKGQYSPTS
                     ELGKVTKSTPFGSIDHPFNPVSLAIGSEASFVARTHDMDRKHMMEVFRRAHDHQGGAF
                     VEIYQNCNV"
     gene            complement(680..>2048)
                     /locus_tag="VKX24_08600"
     CDS             complement(680..>2048)
                     /locus_tag="VKX24_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015035501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HLJ08584.1"
                     /translation="DAERSKNFFALGVVSWMYSRPVEPVYDWIKARFANKPIVRDANT
                     AAFKAGYNFGETAELFQHAFEIAPAVLPKGRYRNITGNVALAYGLLAASRQSGLDLFL
                     GSYPITPASDILHELSKHKSFGVRTMQAEDEIAGIGAALGASFAGQLGVTTTSGPGID
                     LKSETIGLAVSLELPLVIVDIQRGGPSTGLPTKTEQADLLHVMFGRHGEAPVPIVAAR
                     SPGHCFDAALEAARIALKYRTPVFLLSDGYLANAAEPWRIPEVAELPDLRVDFATEPN
                     HGDDFWPYLRDPETLARPWAIPGTPGLMHRIGGIEKEDGTGNISYDPENHEKMVRLRA
                     AKVAGIAKDIPLLEVDRVEGSRVLVVSWGGTWGVTHAGVYRARARNRRVDWAHLIHLN
                     PFPANLGEVLSGYEKVLVPELNLGQLSKLLRMGFDVDVVSLNKIKGIHFRAAEIEACI
                     MELTD"
BASE COUNT          301 a          634 c          776 g          337 t
ORIGIN      
        1 acgttgcagt tctggtagat ctcgacgaag gccccgccct ggtggtcgtg ggcccggcgg
       61 aagacctcca tcatgtgctt gcggtccatg tcgtgcgtgc gggccacgaa cgacgcctcc
      121 gacccgatgg ccagcgagac ggggttgaac ggatggtcga tcgagccgaa cggggtcgac
      181 ttcgtcacct tgccgagctc gctggtcggc gagtactggc ccttggtcag cccgtagatc
      241 tggttgttga acagcaggat ggtcaggttg acgttgcggc gcagggcgtg gatcaggtgg
      301 ttcccgccga tcgacaggcc gtcgccgtcg ccggtgatga cccagacgtc gaggtcgggc
      361 cgcgacacgg cgatgccgct ggcgatggcc ggcgcccggc cgtggatcga gtgcatcccg
      421 taggtctcca tgtagtacgg gaagcggctc gagcagccga tgccggagac gaagaccgtc
      481 ttctccggag gtacgccgag ctcgggcagc aggaactgca cggcggccag caccgagtag
      541 tcgccgcagc cggggcacca ccggacctcc tggtcggact ggaagtcctt ccgggtgaac
      601 gtgaccggtt cggcggcccc gttgccgtcg ccggcatggc cgttggtcgt ggtggtggcg
      661 tggccgttgg tctcggtcat cagtcagtca gctccatgat gcaggcctcg atctcggcgg
      721 cccggaagtg gatgcccttg atcttgttga ggctgaccac gtcgacgtcg aaacccatcc
      781 gcagcagctt cgagagctgg cccagattga gctcggggac gagcaccttc tcgtaaccgg
      841 acaggacctc gccgaggttg gcggggaacg ggttcagatg gatgaggtgg gcccagtcga
      901 cccggcggtt gcgggcccgg gcccggtaga cgccggcgtg ggtcacgccc caggtgccgc
      961 cccagctgac gaccagcacg cgggagccct cgacccggtc gacctccagc agcgggatgt
     1021 ccttggcgat cccggccacc ttggccgccc ggaggcggac catcttctcg tggttctcgg
     1081 ggtcgtagga gatgttcccg gtcccgtcct ccttctcgat gccgccgatg cggtgcatga
     1141 ggccgggcgt gccggggatg gcccacgggc gggccagtgt ctccgggtcg cgcaggtagg
     1201 gccagaagtc gtcaccgtgg ttgggctcgg tggcgaagtc cacccgcagg tcgggcagct
     1261 ccgccacctc ggggatccgc cacggctcgg cggcgttggc caggtacccg tccgacagga
     1321 ggaagaccgg cgtgcggtac ttgagggcga tgcgggccgc ctcgagggca gcgtcgaagc
     1381 agtggccggg ggaccgggcg gccacgatgg ggacgggcgc ctcgccgtgg cggccgaaca
     1441 tcacgtggag caggtcggcc tgctcggtct tggtcggcag gccggtggac ggcccgcccc
     1501 gctggatgtc gacgatcacc agcggcagct cgaggctgac ggccaggccg atcgtttccg
     1561 acttgaggtc gatgccggga ccgctggtcg tggtgacgcc gagctggccg gcgaaagagg
     1621 cgccgagagc ggcgccgatg ccggcgatct cgtcctccgc ctgcatcgtt cggacgccga
     1681 acgacttgtg cttcgacagc tcgtggagga tgtcggacgc cggggtgatc gggtacgacc
     1741 cgaggaagag gtcgaggccc gactgccggc tggcggccag gaggccgtag gccagggcga
     1801 cgttgccggt gatgttgcgg taccggccct tggggaggac ggccggggcg atctcgaagg
     1861 cgtgctggaa cagttcggcc gtttcgccga agttgtagcc ggccttgaag gcggcggtgt
     1921 tggcgtcgcg gacgatcggc ttgttggcga agcgagcctt gatccagtcg tagaccggtt
     1981 ccacggggcg ggagtacatc cacgacacca cgccgagggc gaagaagttc ttcgaccgct
     2041 cggcgtcg
//
LOCUS       DATGJT010000504         3741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_998892, whole genome shotgun sequence.
ACCESSION   DATGJT010000504 DATGJT010000000
VERSION     DATGJT010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3741
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998892"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VKX24_08605"
     CDS             complement(<1..413)
                     /locus_tag="VKX24_08605"
                     /inference="COORDINATES: protein motif:HMM:NF014560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HLJ08585.1"
                     /translation="MPGVGDSIPVLDHGFVRLDAAEASDLSVVNGARVSFLQMKEEMD
                     VKDAGLIRFLMREDHASPFEHNLFRFHVRCPIAVAREWMRHRWSSFNEHSLRYSTAID
                     DFYVPAAAQVRTQVGKPGAYRFEPVEEAVAARAQDL"
     gene            complement(564..1409)
                     /locus_tag="VKX24_08610"
     CDS             complement(564..1409)
                     /locus_tag="VKX24_08610"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08586.1"
                     /translation="MRISVLGMGRMGESIALRLLAGGHQVTVWNRSPGKAAEPVARGA
                     TEVRSVAEAAAGADAVITSLANDDAVRALVLGEGGLAGRLGGAVYIDASTISPALSAE
                     LAGAIDAFVAMPVLGNPEAVRAGTALYLLGGPAPVLERVEPVVAALTSATRRYRTAPM
                     ASAAKLASNLLLLDAVVALAESFTVARAGGLSDDEIRDLLGESPMVAPGVRNRFAAIL
                     GHGEASWWTIALGGKDARLAAELARSAGARLPLTEAAYQRYQDAVAAGLGERDIAAIG
                     DLYRA"
     gene            1520..2620
                     /locus_tag="VKX24_08615"
     CDS             1520..2620
                     /locus_tag="VKX24_08615"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HLJ08587.1"
                     /translation="MKHSRLDLGSPVAKLWVAGFAVALVAVGGAVLWRSDTHPSPAPS
                     ARSVAIDAAATPAPVTPTLSPSPSPSPTKPAAPQGTPDPNPHLGTSGPAVLAIQQKLA
                     SLTYMVGTVDGQFGAGTRDGLIAFQKVEGLPRTGEGDPATLAKLQTATTPTPAYATPA
                     DHIELDIAHQVVYVVRGGAVTAILPTSTGSGQSFTSQGWTRKAITQNGAFSIYWKVNG
                     WHQAPLGDLYKPSFFNDGEAFHGYPEVPTYPASHGCARLPMEFADWFFANAAPYGETV
                     YVYGGPSGPNPDPVVQTSTATSAPPDLSTPTPSPSPSPSPSPTPPSLLGGLFPPPSPS
                     PSPSPLPLPSPSPSVLPSPSPEPTPTPSPSAS"
     gene            2934..3284
                     /locus_tag="VKX24_08620"
     CDS             2934..3284
                     /locus_tag="VKX24_08620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08588.1"
                     /translation="MEVQAECPWCGMVTLPPAEVRCATDPSSNEGLCEVTCPKCLRVV
                     YARTTAQGVEIIQAAGAQPIVGLVPFELLERRSGPALDWDQLLDLLAALDSSACPQAE
                     IFDALDRAKAGDTA"
     gene            complement(3331..>3741)
                     /locus_tag="VKX24_08625"
     CDS             complement(3331..>3741)
                     /locus_tag="VKX24_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08589.1"
                     /translation="QHRRAIMGDPKIRAEMKDASRLVKDAAASLKKAADEAAKIAKST
                     SDGIRSSKEVHEAQTQAGEAIKAIEAAAKAATVAIAAGVAGLSRNEDVKKVAAKTVDV
                     AKAAGKVAGDTVKKTAATAGRKAAEVKEKVAEKR"
BASE COUNT          522 a         1413 c         1271 g          535 t
ORIGIN      
        1 aggtcctgcg cccgggcagc gacggcctcc tcgaccggtt cgaaccggta ggcgccgggc
       61 ttgcccacct gggtccggac ctgggcggcg gcggggacgt agaagtcgtc gatggcggtc
      121 gagtagcgca ggctgtgctc gttgaagctg ctccagcggt gccgcatcca ttcccgggcg
      181 acggcgatcg ggcagcggac gtggaagcgg aacaggttgt gctcgaacgg ggaggcgtgg
      241 tcctcccgca tcaggaatcg gatcaggccg gcgtccttga catccatctc ctccttcatc
      301 tgcaggaagg agacccgggc cccgttgacc accgaaaggt cggaggcctc ggcggcgtcc
      361 aggcgcacga agccgtggtc gaggacgggg atggagtcac cgacaccggg catgggacca
      421 agactaccgt ggccgggaat ccggctcggg atccacccgg gctggagggg caacgacggc
      481 gaaccgggtt ctctgagcga gaacccgtca ttttggcggg ttttcgctca caaaaggccg
      541 ggcagcgccc gggcgggcca agatcaggcc cggtacaggt cgcctatggc ggcaatgtcg
      601 cgttcgccca gcccggccgc cacggcgtcc tggtagcgct ggtaggcggc ctcggtcagc
      661 ggcaaccgcg ccccggcgga gcgggccagc tcggccgcca ggcgggcgtc cttgccgccc
      721 agggcgatcg tccaccagga ggcctcgccg tggcccagga tcgccgcaaa gcggttccgg
      781 acccccgggg ccaccatcgg gctctcgccg agcaggtcac ggatctcgtc gtcgctcagg
      841 ccgcccgccc gggcgacggt gaacgactcg gcgagggcga cgacggcgtc gagcagcagc
      901 aggttggatg ccagcttggc ggcgctggcc atcggtgccg tgcggtagcg cctggtcgcc
      961 gaggtcagcg ccgccaccac cggctcgacc cgctcgagca ccggagcggg accgccgagc
     1021 aggtacagcg ccgtgccggc ccggaccgcc tccgggttgc ccaggaccgg catggcgacg
     1081 aaggcgtcga tggccccggc gagctcggcg ctgagcgccg gcgagatcgt cgaggcatcg
     1141 atgtagacgg cgccgccgag gcggccggcg agacctccct caccgagcac tagcgcccgc
     1201 accgcgtcgt cgttggccag gctggtgatg accgcatcgg cgccggcagc ggcctccgca
     1261 acggaccgga cctcggtggc gccgcgagcg accggctcgg cggccttgcc cggcgaccgg
     1321 ttccagacgg tgacctgatg gccacccgcg agcaggcgca gggcgatgct ctcgcccatc
     1381 cggcccatgc ccaacaccga gatccgcacg tctcatagct cccctggcgg cgccccgcta
     1441 accctcgccg ggcgccggag cgtggcgtcc cgagcgcccc cgccgtgaca aatcctttca
     1501 ggttgaccac aatctggccg tgaagcattc tcggctcgac ctcggctcgc ccgtcgccaa
     1561 gctctgggtg gccggtttcg ccgtggcgct ggtggccgtg ggtggcgccg tgctgtggcg
     1621 gagcgacacc catccctcac cggcgccgag cgcccgatcg gtggcgatcg acgccgccgc
     1681 gaccccggcg ccggtgaccc cgaccctgtc gccgtcgccc tcgccgtcgc cgaccaagcc
     1741 ggccgccccg cagggcaccc cggaccccaa cccgcacctg ggcacgagcg ggccggcggt
     1801 gctggccatc cagcagaagc tggcctcgct cacctacatg gtgggcacgg tcgacggcca
     1861 gttcggggcc gggacccggg acgggctgat cgccttccag aaggtcgagg gcctgccgcg
     1921 caccggcgag ggcgaccccg ccaccctggc caagctccag accgccacca ccccgacgcc
     1981 ggcctacgcc acaccggcgg atcacatcga actcgacatc gcccaccagg tcgtctacgt
     2041 cgtccggggc ggggcggtga cggcgatcct gccgacctcg accgggtccg gccagtcgtt
     2101 cacctcgcag ggctggaccc ggaaggcgat cacccagaat ggcgccttct cgatctactg
     2161 gaaggtcaac ggctggcacc aggcgccgct cggggacctg tacaaaccct ccttcttcaa
     2221 cgacggtgag gcgttccacg gctacccgga ggtaccgacc tacccggcgt cgcacggctg
     2281 cgcccggctc ccgatggagt tcgccgactg gttcttcgcc aacgccgccc cgtacggcga
     2341 gacggtctac gtctacggcg gcccgtccgg cccgaacccg gacccggtgg tgcagacctc
     2401 gaccgcgacc agcgccccac cggatctgtc gaccccgaca ccgagcccgt cgcccagccc
     2461 cagcccgagc cccaccccgc cgtcgctgct cggaggcctg ttcccgccgc cctcgcccag
     2521 cccgtccccc agcccgctcc ccctgccgtc accgagcccg agcgtgctgc ccagccctag
     2581 cccggagccg acgccgaccc cgtcgcccag cgcctcatag cagcgtccgg ttcccccgga
     2641 ccgccgtcga cgggcggccc atcccccgtt cggcctggcc cggtgatgct ggtacccccc
     2701 cgaaagaggc atgctggcac cccttcggac tagtcattcc gccgccgata ttcctcctac
     2761 gcagagcttc ccagccgtga tggtccagct gacggacccc ctgaccggac ccgggttcgg
     2821 agtcctcagg agggtcacaa agcgggccct gccggaagca aacggggtgc ggtgcagtgg
     2881 gggaaccgga gggccgaggc aaccgccgaa ggccgtgatg aaggggggtc gtcgtggaag
     2941 tgcaggcgga atgcccgtgg tgcggaatgg tgacgctgcc ccccgcagag gttcgctgcg
     3001 cgaccgaccc gtcgtcgaac gaaggactgt gcgaggtgac ctgcccgaag tgcctccggg
     3061 tggtctacgc ccggacgacc gcccaggggg tggagatcat ccaggcggcc ggcgcccaac
     3121 cgatcgttgg cctggtcccc ttcgaactgc tcgagcggcg ctcgggtccg gccctcgact
     3181 gggaccagtt gcttgacctc ctggccgccc tcgattcgtc ggcgtgcccg caggccgaga
     3241 tcttcgacgc cctggaccgg gcgaaggctg gcgacaccgc ctaaccggta gcgacgcagg
     3301 gaaccggccg ggccgactgc gcccggccaa tcagcgtttt tcggcgacct tctccttgac
     3361 ctcggccgcc ttgcggcccg ccgtggcggc ggtcttcttg accgtgtcgc cggcgacctt
     3421 ccctgccgcc ttggcgacgt cgaccgtctt ggcggcgacc ttcttcacgt cctcgttgcg
     3481 gctcagcccg gcgacgccgg cagcgatcgc caccgtggcg gccttggccg ccgcctcgat
     3541 tgccttgatc gcctcgccgg cctgcgtctg ggcctcgtgg acctccttcg agctgcggat
     3601 cccatccgac gtggacttgg cgatcttggc cgcctcgtcg gccgccttct tcaggctggc
     3661 ggcggcgtcc ttgaccagcc gcgaggcgtc cttcatctcc gccctgatct ttgggtctcc
     3721 cataatcgct ctcctatgct g
//
LOCUS       DATGJT010000505         2563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_380542, whole genome shotgun sequence.
ACCESSION   DATGJT010000505 DATGJT010000000
VERSION     DATGJT010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380542"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1830)
                     /gene="ftsH"
                     /locus_tag="VKX24_08630"
     CDS             complement(<1..1830)
                     /gene="ftsH"
                     /locus_tag="VKX24_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020459588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HLJ08590.1"
                     /translation="MSSFHLHRSSPAKPGPPTEPPKPPPAPPPPKWLHSLWLAGLVGT
                     LLLLFLPGPSPKRTALNYTDWRAKVDAGQVRTATIDPDGKVTGELTDKTDYSSRIPVA
                     LKDDALAGDLSAHHVTVTATGNSTSLLSVLGGFLPFVFLLGVYFWISRRATRQLAGGF
                     MGIGSSRAKVYDEERPTTRFSDVAGYEGAKREITEVVDFLKHPERYTAAGAVGPKGVL
                     MVGPPGTGKTLLARAVAGEAEVPFLALTGSSFVEMFVGVGAARVRDLFAAARKSAPSI
                     IFIDEIDAIGQRRAGAGVAVSNDEREQTLNQLLAEMDGFDPDTGVVVLAATNRPEVLD
                     PALLRPGRFDRQVTIPLPNVNERAAILAVHSRGKKLASDVDLASVARATPGFSGADLA
                     NLVNEAAINTVRDNRDELTKNDFDTARDRIILGRREGSNVLLPEEKHAVAVHESGHAI
                     VAALSEHADPVAKVTILPAGQTLGVTEQLPLVERHLYGEDYLHDSLAVMLGGRASELV
                     VNGQGSTGAANDLARATDLATKMVREFGLSRALGPVGYPEGGSVFLGGGGQGLSSRPF
                     AEATQATIDSEVSRLLREAEQRAVDLLRAHRGELDQLVSLLLEH"
     gene            complement(1945..2370)
                     /locus_tag="VKX24_08635"
     CDS             complement(1945..2370)
                     /locus_tag="VKX24_08635"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLJ08591.1"
                     /translation="MTTRRAVIALLAPAMAAVSLLAVTGVRSFAVSPAADGASCSPNG
                     TALSISAFDGKFDKKCLAAPANQALTIDFKNLDRGIPHNVAIYEDESAQKNFFKGDLV
                     DGPGETTYNVPALPQGRWFFRCDPHPDMKGTFIVGNPSS"
     gene            complement(2383..>2563)
                     /locus_tag="VKX24_08640"
     CDS             complement(2383..>2563)
                     /locus_tag="VKX24_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08592.1"
                     /translation="QAFYHPAHRHMAYNEGKDHILLTTMYFDLPHEPAAPVIGNTIAA
                     VDFTQAPPADCPRLR"
BASE COUNT          340 a          874 c          968 g          381 t
ORIGIN      
        1 gtgctccagc agcaggctga ccagctgatc cagctcgccg cgatgcgcgc gcagcagatc
       61 gacggcccgc tgctcggcct cgcgcagcag ccgtgacacc tcgctgtcga tcgtggcctg
      121 ggtcgcctcg gcgaacggcc ggctcgacag cccctgaccg cccccgccca ggaacaccga
      181 cccgccctcc ggatacccca ccgggccaag cgcccgggac agcccgaact cgcgcaccat
      241 cttggtcgcc aggtcggtcg ctctggcgag gtcgttcgca gcacccgtcg agccctgacc
      301 gttgacgacg agctcgctcg cccgaccccc cagcatgacg gcgagcgagt cgtggaggta
      361 gtcctcgccg tagaggtggc gctccaccag cggcagctgc tcggtcacgc cgagggtctg
      421 gccggcgggc aggatggtca ccttggccac cgggtcggcg tgctcggaca gcgccgccac
      481 gatggcgtgg ccggactcgt gcaccgccac cgcgtgcttc tcctccggca gcagcacgtt
      541 ggagccttcc cgccggccca ggatgatgcg gtcgcgggcc gtgtcgaagt cgttcttggt
      601 gagctcgtcg cggttgtcgc ggacggtgtt gatggccgcc tcgttgacca ggttggccag
      661 gtcggcgccg gagaagccgg gcgtggcccg agccaccgag gccaggtcca cgtcggacgc
      721 cagcttcttg ccccgggagt gcacggccag gatcgcggcg cgttcgttca cgttcggcag
      781 cggaatcgtg acctgccggt cgaaccggcc gggccgcagc agggccgggt cgaggacctc
      841 cggccggttg gtggccgcga ggacgacgac cccggtgtct ggatcgaacc cgtccatctc
      901 ggccagcaac tggttgagcg tctgctcgcg ttcgtcgttg gacaccgcca ccccggcccc
      961 ggcccggcgc tggccgatgg cgtcgatctc gtcgatgaag atgatcgacg gcgccgactt
     1021 gcgggcggcg gcgaagaggt cccgcaccct cgccgcgccg acgccgacga acatctccac
     1081 gaagctcgac cccgtcaggg ccaggaacgg cacctcggcc tcgccggcca ccgcccgggc
     1141 cagcagggtc ttccccgtac cgggcggccc gaccatgagg acgcccttcg gcccgacggc
     1201 gccggcggcg gtgtagcgct cggggtgctt gaggaagtcg acgacctcgg tgatctcccg
     1261 cttggcgccc tcgtaccccg ccacgtcgct gaagcgggtc gtcggccgct cctcgtcgta
     1321 gaccttggcc cgggagctgc cgatgcccat gaagccgccg gccagttggc gggtggcccg
     1381 acggctgatc cagaagtaga cgccgagcag gaagacgaag ggcaggaagc cgcccagcac
     1441 gctgagcagg ctcgtgctgt tgccggtggc cgtcacggtc acgtgatggg cggacaggtc
     1501 gccggccagg gcgtcgtcct tcagggcgac ggggatgcgg gagctgtagt cggtcttgtc
     1561 ggtgagctcg ccggtcacct tgccgtcggg gtcgatcgtc gccgtgcgga cctggccggc
     1621 gtcgaccttg gccctccagt cggtgtagtt gagggcggtc cgcttggggg acgggccggg
     1681 caggaacagg agcagcagcg ttccgacgag cccggccagc cacaggctgt gcagccactt
     1741 cggcggcggc ggcgccggcg gcggcttggg cggctcggtc ggcgggccgg gcttagccgg
     1801 gctggagcgg tggaggtgga acgacgacat tcgcgggcct cctggcgggc gtcgccggga
     1861 ggcgggcccg ccgccatcct gtcgggcgcg gcccggcccc gccaaggcgg ggccgggagc
     1921 gacgcctggc ggtgccgacc gcctctagga cgacgggttg ccgacgatga acgtcccctt
     1981 catgtcgggg tgggggtcgc agcggaagaa ccagcgcccc tggggcaggg ccgggacgtt
     2041 gtaggtcgtc tccccgggcc cgtccacgag atcgcccttg aagaagttct tctgggccga
     2101 ctcgtcctcg tagatggcca cgttgtgggg aatgccgcgg tcgaggttct tgaagtcgat
     2161 ggtgagcgcc tggttggccg gggcggcgag gcacttcttg tcgaacttgc cgtcgaaggc
     2221 gctgatcgac agggcggtgc cgttcgggct gcagctggcg ccgtccgcgg cgggggaaac
     2281 ggcgaacgac cggacgccgg tcaccgccag cagcgacacg gcggccatcg ccggcgccag
     2341 cagggcgatg accgcgcgac gggttgtcat ggccggttca gctcaccgca gccgggggca
     2401 gtccgccggc ggggcctggg tgaagtcgac ggccgcgatc gtgttgccga tcaccggcgc
     2461 cgccggctcg tggggcaggt cgaagtacat ggtcgtgagc aggatgtggt ccttgccctc
     2521 gttgtaggcc atgtggcggt gggccgggtg gtagaaggcc tgg
//
LOCUS       DATGJT010000506         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_688661, whole genome shotgun sequence.
ACCESSION   DATGJT010000506 DATGJT010000000
VERSION     DATGJT010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_688661"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /gene="dxr"
                     /locus_tag="VKX24_08645"
     CDS             <1..1061
                     /gene="dxr"
                     /locus_tag="VKX24_08645"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HLJ08593.1"
                     /translation="DVVRDNPGAYEVVALAAGRNGKLLAEQAAEFGVADARARCAADD
                     PAVLAGFAELPDVDVVLNAVVGFAGLPATVAALQAGKRLALANKESLIAAGPVVAAAR
                     EKGGGEIVPVDSEHSAVYQALQAGPRPAVRRILLTASGGPFRGRSRAELDRVTVADAL
                     AHPTWSMGPKITVDSSTLMNKGLEVIEARELFAVELEQIEVVVHPQSVIHGMVEFSDG
                     STIAQLSMPDMRLPIAYALAAPGRVAQPVGLIDWARLGTLTFEAPDPEAFPCLRLAYR
                     AATAGGDAPATLNAANEVAVAAFLGGRLSWRGIADVVGEVLDGHRPGNVSTIDDVVEA
                     DGRARSCAAAAVDRRNAA"
     gene            1058..2311
                     /locus_tag="VKX24_08650"
     CDS             1058..2311
                     /locus_tag="VKX24_08650"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M50 family metallopeptidase"
                     /protein_id="HLJ08594.1"
                     /translation="MKSPTLEELAESEAAPAVAPPGGGRRAALTALVLVIGMAVLAFF
                     RPQLAGTIGVLAAIVLMIMLHEAGHFVMAKRAGMKVTEFFLGFGPRLWSFRRGETEYG
                     VKAIPAGGYVRIIGMSNLDVVEPADEERTYRAKPYHDRLGVAVAGSTMHFILAFLLLL
                     AVYALVGIPAARPIIQQIVPDSPAQHSDFRVGDRIVAVNGVAIKTWEDIPTYVQAHGE
                     SELTFTVIHKGSTQRTDVVLRPRAETVDGKQVPRVGIGPEQYLQTKPLPSAVMTTATD
                     LPKFMWETLKALGGLFSPHGIENYGHLLQGKAGNQNNRLLSPVGATKVASQAVQDGWG
                     AVLMFLFAINVFVGIFNMVPLLPLDGGHVAIATYEKIASSIKRRRVQVDVQKLMPITA
                     AVLAVLVVLGLSALYLDIVRPVSSP"
     gene            2408..>2566
                     /locus_tag="VKX24_08655"
     CDS             2408..>2566
                     /locus_tag="VKX24_08655"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020488678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HLJ08595.1"
                     /translation="MHPRRQTRQIHVGSVAIGGGAPVSVQSMTTTKTADVDGTLAQIY
                     ALKAAGADI"
BASE COUNT          355 a          946 c          901 g          364 t
ORIGIN      
        1 tcgacgtcgt ccgggacaac cccggcgcct acgaggtcgt ggccctcgcc gccggccgga
       61 acgggaagct tctggccgag caggccgccg agttcggcgt ggccgacgcc cgggcccgct
      121 gcgccgccga cgacccggcc gttttggccg ggttcgccga gctgcctgac gtcgacgtcg
      181 tcctcaacgc cgtcgtgggc ttcgccgggc tgccggccac ggtcgccgct ctccaggccg
      241 gaaagcggct ggccctggcc aacaaggaga gcctcatcgc cgccggcccg gtggtggccg
      301 ccgcccggga gaagggcggc ggggagatcg tgccggtcga ctccgagcac tccgccgtct
      361 accaggcgct ccaggccggg ccccgccccg ccgtccggcg catcctgctg acggcgagcg
      421 gcgggccctt ccggggccgg tcccgagccg agctcgaccg ggtgacggtg gccgacgccc
      481 tcgcccatcc gacgtggtcg atgggtccga agatcacggt cgacagctcg acgctcatga
      541 acaagggcct cgaggtgatc gaagcccggg agctgttcgc ggtggagctg gagcagatcg
      601 aggtggtcgt gcacccgcag tcggtgatcc acgggatggt cgagttctcc gacgggtcga
      661 ccatcgccca gctgtcgatg cccgacatgc ggctgccgat cgcctacgcc ctggccgctc
      721 cgggccgggt ggcgcagccg gtcgggctga tcgactgggc ccggctcggg acgctcacgt
      781 tcgaggcccc cgaccccgag gccttcccct gcctccggct ggcctaccgg gcggcgacgg
      841 ccggcggcga cgccccggcc acgctcaacg ccgccaacga ggtggcggtg gccgccttcc
      901 tcggcgggcg gctttcctgg cgggggatcg ccgacgtcgt cggcgaggtg ctcgacgggc
      961 accgcccggg gaacgtctcc accatcgacg acgttgtgga agccgatggc cgggcgcgct
     1021 cgtgcgccgc cgcggccgtg gaccggagga acgccgcgtg aagagtccca cgctggaaga
     1081 gctggccgag agcgaggcgg cccccgccgt agcgccgccg ggcggcggcc ggcgggcggc
     1141 gctcaccgcc ctggtgctgg tgatcgggat ggcggtgctg gcgttcttcc ggccccagct
     1201 ggccgggacc atcggcgtcc tggccgccat cgtcctcatg atcatgctcc acgaggcggg
     1261 ccacttcgtg atggccaagc gggccggcat gaaggtcacc gagttcttcc tcggcttcgg
     1321 cccgaggctg tggtcgttcc ggcggggcga gacggagtac ggcgtcaagg ccatccccgc
     1381 cggcgggtac gtccgcatca tcgggatgag caacctcgac gtcgtcgagc ccgccgacga
     1441 ggagcggacc taccgggcca agccctacca cgaccgtctc ggcgtggccg tggccggctc
     1501 cacgatgcac ttcatcctgg ccttcctgct cctgctggcg gtctacgccc tggtggggat
     1561 cccggcggcc cggccgatca tccagcagat cgtgcccgac tccccggccc agcacagcga
     1621 cttccgggtc ggcgaccgga tcgtggcggt caacggcgtg gccatcaaga cgtgggagga
     1681 catcccgacc tacgtccagg cccacggcga gtcggagctg accttcaccg tcatccacaa
     1741 gggcagcacg cagcggaccg acgtcgtcct gcggccccgg gccgagaccg tcgacgggaa
     1801 gcaggtcccc cgggtgggga tcggccccga gcagtacctc cagacgaagc cgctcccgtc
     1861 ggccgtgatg acgacggcga ccgacctgcc gaagttcatg tgggagacgc tcaaggccct
     1921 cggcgggctc ttctcgcccc acggcatcga gaactacggg cacctgctcc agggcaaggc
     1981 cggcaaccag aacaaccgcc tgctgtcccc ggtcggggcg accaaggtgg ccagccaggc
     2041 cgtccaggac ggctggggcg ccgtgctcat gttcctgttc gccatcaacg tcttcgtcgg
     2101 catcttcaac atggtcccgc tgctcccgct cgacggcggc cacgtggcca tcgccaccta
     2161 cgagaagatc gcctcgtcga tcaagcggcg ccgggtccag gtcgacgtcc agaagctcat
     2221 gccgatcacc gccgccgtcc tcgccgtgct ggtcgtgttg ggcctctcgg ccctctatct
     2281 cgacatcgtc cggccggttt cgagccccta gcggtgaagt cgcccccggc ggggtagtcg
     2341 gatctccgca ggatctccgg acgctgcgga cgggaactcc gcggcgtcga ccctaggctg
     2401 gaggacgatg catcctcgac gccagacccg ccagatccac gtcggctccg tcgccatcgg
     2461 cggcggcgcg ccggtcagcg tccagtcgat gacgacgacg aagaccgccg acgtcgacgg
     2521 cacgctggcc cagatctacg ccctcaaggc ggccggggcc gacatc
//
LOCUS       DATGJT010000507         2506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_794302, whole genome shotgun sequence.
ACCESSION   DATGJT010000507 DATGJT010000000
VERSION     DATGJT010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_794302"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1234)
                     /locus_tag="VKX24_08660"
     CDS             complement(<1..1234)
                     /locus_tag="VKX24_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013491371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HLJ08596.1"
                     /translation="MSLYQRLHEGPPGGPSGGPGRDPLLDELRQRVHALLIDELGPLL
                     YDRRVSEEELSAHLQEQLRIILGRERIPLSASDRDQLLQDVADDILGYGPIDGLLKDP
                     DVTEVMVNGPGRVYVERKGKLTQTGAVFADEAHLRRIIEKIVAQVGRRVDEATPMVDA
                     RLPDGSRVNAIIPPLAIGGPFLTIRKFAKDPFTVEDLVNFGTFTPETARFLEACVKGR
                     LNVIVSGGTGTGKTTALNVLSSFIPADERVVTIEDAKELQLRQDHVLALESRPPNVEG
                     KGEVRIRDLVRNALRMRPDRIVVGECRGGEALDMLQAMNTGHDGSLTTVHANSPRDSL
                     SRIETMVLMAGMELPVRAIREQMASAIDLIVQLTRLRDGSRRVTHVSEVQGMEGDVIV
                     LQDLFLFDFAMGVDADGRF"
     gene            complement(1246..2481)
                     /locus_tag="VKX24_08665"
     CDS             complement(1246..2481)
                     /locus_tag="VKX24_08665"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08597.1"
                     /translation="MADVPAIHGRALEWEATIDLAPPYDLALVEPDPALRADLAADLG
                     DRDAAIFAEPGGLAERLVPGRRTVVVFGPSLADPVGLDEIDALTRTRPEFGAILVVPE
                     LSTGLFREALRSGARDVLAFPVEPGAITESVDRVGRSLVGTAPPPPLEHTEAGRIITV
                     SSMKGGSGKTVVATNLAVTLARRSERPVVLVDADLQFGDVAVMLRLNAPHTIVDAIPA
                     MDGLDAQFLRGLLVRHEPSGLLVLPAPLDPSLAERVGGPDMLRILEVLRSFCSYVVID
                     TPAQFNDVVLSVIEASDDIVVVAGMEIPNIKNTKLGLQTLQRLGVPESKLRLLVNRSN
                     SKVQLDVKEVERTLGLKTQAHIPSDIVVPQAVNRGVAVVLDAPKAEVTRAFDSLADLF
                     APAAVAAPAKKARGLFGRG"
BASE COUNT          353 a          840 c          955 g          358 t
ORIGIN      
        1 ggaaccggcc gtcggcgtcg acgcccatgg cgaagtcgaa gaggaacagg tcctggagga
       61 cgatgacgtc gccctccatg ccctggacct cgctgacgtg ggtcacccgg cggctgccgt
      121 cccgcaggcg ggtcagctgc acgatgaggt cgatggccga cgccatctgc tcccggatgg
      181 cccgcaccgg cagctccatg ccggccatga ggaccatggt ctcgatccgg gagaggctgt
      241 cgcggggcga gttggcgtgg accgtcgtga gcgagccgtc gtggccggtg ttcatggcct
      301 gcagcatgtc gagggcctcg ccgccccggc actcgccgac cacgatccgg tcgggccgca
      361 tccgcagggc gttgcggacg aggtcgcgga tgcggacctc gcccttcccc tcgacgttcg
      421 gcggccggga ctccagggcc aggacgtggt cctggcggag ctggagctcc ttggcgtcct
      481 cgatcgtcac cacccgctcg tcggcgggga tgaacgacga cagcacgttg agggccgtcg
      541 tcttgccggt gcccgtcccg ccgctgacga tgacgttcag ccggcccttg acgcaggcct
      601 cgaggaaccg ggccgtctcg ggggtgaacg tgccgaagtt gacgagatcc tcgacggtga
      661 acgggtcctt ggcgaacttc cggatggtga ggaacggccc gccgatggcc agcggcggga
      721 tgatggcgtt gacccgggag ccgtcgggaa ggcgggcgtc gaccatcggc gtcgcctcgt
      781 cgacccgccg cccgacctgg gcgacgatct tctcgatgat ccggcgcagg tgggcctcgt
      841 cggcgaacac cgcaccggtc tgcgtcagct tgcctttccg ctcgacgtag acgcggcccg
      901 gtccgttgac catgacctcg gtcacgtcgg ggtccttcag gagcccgtcg atcgggccgt
      961 agccgaggat gtcgtcggcg acgtcctgga ggagctggtc gcggtcggag gccgacaggg
     1021 ggatccgctc ccggccgagg atgatccgca gctgctcctg cagatgggcg gagagctcct
     1081 cctcgctgac ccgccggtcg tagaggagcg gccccagctc gtcgatgagc agggcgtgga
     1141 cccgctggcg cagttcgtcg agcagcgggt cccggcccgg gccgccggac gggccgccgg
     1201 gcgggccctc gtggagccgt tggtagaggg acatgacggg atctcctagc cgcggccgaa
     1261 gaggccgcgg gccttcttcg ccggggcggc gaccgccgcc ggcgcgaaca ggtcggccag
     1321 cgagtcgaag gcccgcgtca cctccgcctt gggcgcgtcg aggacgacgg cgacgccccg
     1381 gttgaccgcc tgggggacga cgatgtcgct cgggatgtgg gcctgggtct tgaggcccag
     1441 cgtccgctcg acctccttga cgtcgagctg gaccttggag ttcgaccggt tgacgagcag
     1501 ccggagcttc gactcgggca cccccaggcg ctgcagcgtc tgcaggccga gcttcgtgtt
     1561 cttgatgttg gggatctcca tccccgccac cacgacgatg tcgtcggagg cctcgatcac
     1621 cgagaggacg acgtcgttga actgggccgg ggtgtcgatg acgacgtagc tgcagaagga
     1681 gcgcagcacc tcgaggatgc ggagcatgtc ggggccgccc acccgctcgg ccagcgacgg
     1741 gtcgaggggg gcgggcagca cgagcaggcc gctcggctcg tggcggacga ggaggccccg
     1801 gaggaactgg gcgtcgagcc cgtccatggc cgggatggcg tcgacgatcg tgtggggggc
     1861 gttgagccgc agcatgacgg ccacgtcgcc gaactgcagg tcggcgtcga cgaggaccac
     1921 cggccgctcc gagcgccggg ccagcgtcac cgccaggttg gtggccacca cggtcttgcc
     1981 cgagccgccc ttcatcgacg acacggtgat gatgcggccc gcttcggtgt gctccagcgg
     2041 cggcggcgga gccgtgccga ccagcgaccg gccgacacga tcgaccgact cggtgatggc
     2101 gccgggttcg acggggaagg cgaggacgtc gcgggcgccg gagcgcagcg cttcccggaa
     2161 gaggccggtc gacagctcgg gcacgacgag gatggcgccg aactccggcc gggtgcgggt
     2221 cagggcgtcg atctcgtcga ggccgaccgg gtcggccagg ctcggaccga agacgacgac
     2281 cgtccgccgt ccggggacca gcctttcggc cagccccccc ggctcggcga agatggcggc
     2341 gtcgcggtcg ccgagatcgg cggccaggtc cgcccggaga gccgggtccg gctcgaccag
     2401 ggcgaggtcg tagggagggg ccaggtcgat cgtggcctcc cactccaagg cccggccgtg
     2461 gatcgcaggc acgtcagcca tagaggttcc cctggttcac cggcgg
//
LOCUS       DATGJT010000508         5459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_67909, whole genome shotgun sequence.
ACCESSION   DATGJT010000508 DATGJT010000000
VERSION     DATGJT010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5459
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67909"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VKX24_08670"
     CDS             complement(<1..199)
                     /locus_tag="VKX24_08670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyneurosporene methyltransferase"
                     /protein_id="HLJ08598.1"
                     /translation="MESGAQQEVPAPAAMMGLITGYWVSQAIGVVALLGVADELAAGP
                     RDSDDLARAVGAEPRSLYRVLR"
     gene            complement(244..774)
                     /locus_tag="VKX24_08675"
     CDS             complement(244..774)
                     /locus_tag="VKX24_08675"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08599.1"
                     /translation="MGRLPLGEQRQAAFAAATQHDPELLVLDEPTSGVSPLARSRLWS
                     VIRERADRGTTILVSTHYMDEAEQADRVIIMASGRIVAEGAVADIVGTRRVVEVAAEN
                     WPEALRALDRPSRILVLDGRAIRVLGEDAATVRAELQRASIQARTRIVPASLNETLVE
                     LSRNPSSSGTKVGTIG"
     gene            complement(876..1217)
                     /locus_tag="VKX24_08680"
                     /pseudo
     CDS             complement(876..1217)
                     /locus_tag="VKX24_08680"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(1118..1924)
                     /locus_tag="VKX24_08685"
     CDS             complement(1118..1924)
                     /locus_tag="VKX24_08685"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08600.1"
                     /translation="MSWGATGLVVRFGSTAALAGVDLTIEPGRIHAVIGGDGSGKTTL
                     LRALAEAIPVDGGSVRRPGPGRIGYVSIGGGLFPDLTVDENLDFVARVYGLSAWRDRA
                     GELLHRAGLAAVGGRPAGVLSGGQQRKLAGILALLPEPELLVLDEVTTGVDPRSRMEI
                     WRLVMVAAAAGSAVVVATAYLDEAERAGHVVLLHEGRVLAFGSPQSIVDAVTGTVEDV
                     ATPADPDLAWRRGAQWRQWRPAGSPAAGGRLRLEDAAIISELLAERVPRP"
     gene            complement(1921..2925)
                     /locus_tag="VKX24_08690"
     CDS             complement(1921..2925)
                     /locus_tag="VKX24_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006331417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08601.1"
                     /translation="MIVKEFRQMRRDRRTMALMFVVPVLMLAVFGYAARFDVARIPTA
                     VVGSPSPEVLRALGPAFDVVRRQPSGDEAAARRLLRDSKAHVVLVAGGPRPAVLIDGT
                     ELFSAQSALRHLGGLPDTRVDVLYNANLSTAAVMVPSITGFILLFVGLFITGLGVVRE
                     REQGTLEQFAVTPLRPADVIVGKIVPYFVIAFLNLVIATLAGLWLFGVPFRGSVVLFA
                     AFGLVFLFTVLGFGVLVSTASRTQGEAVQLAILVILPQVMVSGMFFPLQAMPAGIRWI
                     ASVMPLTYYIVGMRSVLLKAAPFAALRFPLAVLVVMAVAVFALSVLRFRRELAPAGGA
                     "
     gene            2985..3926
                     /locus_tag="VKX24_08695"
     CDS             2985..3926
                     /locus_tag="VKX24_08695"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ08602.1"
                     /translation="MVAYPGMRIAVVGAGIMGTGIAQVFAEAGLDVRLYARRRDSLDQ
                     ARARIAANQAEMRAAGLAADDGVLDRVVGTDELAEAVGEADFVSENVSEDIGLKQKLF
                     AELDRLAPASAVLSTNTSGLSITAIAEATSRPERVVGLHWLNPPHLMPVVEVCRGERT
                     SDEVMEATYELARRAGRRPIRVERDVPGFLVNRLQFALLREAFHIVDERIASAEDVDR
                     AVQGGLGLRWAAVGPFRVVDLAGLATFRAVAAQLFPRLAADTAPPGILAEKLERGESG
                     AAAGRGFHGYPPGAHDALIAGRNARLLALQRALADGD"
     gene            complement(3897..4082)
                     /locus_tag="VKX24_08700"
     CDS             complement(3897..4082)
                     /locus_tag="VKX24_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08603.1"
                     /translation="MPDPLERLLAWDGYRRALDWEDAAALQRIGRLYRFGLPELEPRR
                     RGARRTTPSVPVGQRPL"
     gene            4289..5113
                     /gene="lgt"
                     /locus_tag="VKX24_08705"
     CDS             4289..5113
                     /gene="lgt"
                     /locus_tag="VKX24_08705"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HLJ08604.1"
                     /translation="MIAAIPSPPFNAIHIGRFQLRFYGLMIGLGAAAAIALAGRRWEA
                     RGGRSSDIGSLAVWALPAGLVGARAYHVITDPELFRGRWLHVFAIWEGGLGIPGGLLA
                     GVAVGVVVARRRGLAIGPLLDVVAPALPLAQAIGRLGNWFNQELYGRPTGLPWGLRID
                     PAHRPPGLEQVATYQPTFLYEALWNLALIAVLLWIERRRRLRPGRLFALYVGGYALGR
                     LWVESLRIDHANTILGLRVNIWVSLLAMAAVAAFFAWDGSRARRPAAPDPPVADGD"
     gene            5127..>5459
                     /locus_tag="VKX24_08710"
     CDS             5127..>5459
                     /locus_tag="VKX24_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ08605.1"
                     /translation="MQSRPGPRPALWLSLTALSLALHAPGFVVRLFNSDEASLASMAM
                     VLNRGGTLYHTTADRKPPIVPYVYAFVFRLTGSLDIRYVRVAAAVAVGLAAALLASEA
                     RRRYGTARA"
BASE COUNT          756 a         1979 c         2029 g          695 t
ORIGIN      
        1 gccgcagtac ccggtagagc gaccggggtt cggcgccgac cgcccgggcg aggtcgtcac
       61 tgtcgcgggg cccggccgcc agctcgtcgg caactccgag cagcgcgacc acgccgatgg
      121 cctggctgac ccagtagccg gtgatgagac ccatcatggc ggccggcgcg gggacttcct
      181 gctgtgctcc agattccatc tcggtctccc atcgtcgcgg cagaaaggcg ccgacacgac
      241 cggtcaaccg atcgtaccga ccttcgtgcc ggagctgctc gggtttcggc tcagctcgac
      301 gagggtctcg ttgagggatg cggggacgat ccgggtccgg gcctggatgg aggcccgttg
      361 cagctcggcc cggacggtgg cggcgtcctc gccgaggacc cggatcgccc gtccgtcgag
      421 aaccaggatg cgggagggcc ggtcgagggc gcggagggct tcgggccagt tctcggccgc
      481 cacctccacc acccgacggg tgccgacgat gtcggccacg gcgccctcgg cgacgatccg
      541 gccgctggcc atgatgatga cccggtcggc ctgctcggcc tcgtccatgt aatgggtcga
      601 gacgaggatc gtcgtgccgc ggtcggcccg ctcccggatg acgctccaca ggcggctgcg
      661 ggccaggggg gagacgccgg aggtcggctc gtcgaggacg agaagctccg gatcgtgctg
      721 ggtggcggcg gcgaaggccg cctggcgctg ctctccgagc ggcagccggc ccaccggccg
      781 ccgatcgccg cgggcgtagt cggacggcgt ggccgagagg aggccggccg gaactccagg
      841 ttctcccgga cggtgaggtc acggtagaga ccgaggttct gggcgacgta gccgacgcgg
      901 cggcgctgcg cccgcgtcgg gggatcgccg aagagcgcca cggaacccga ggtcggccgg
      961 agcgtcccga ggagcaaccg gatgagcgtg gtcttgccgg cgccgttggc gccgaggagc
     1021 ccgacgacct cgcccgcctc gatgtcgagg tcgacgtcgt cgacggcggt gaaggccccg
     1081 taggtccggg tgaggccctg agcggcgacc accacgctca cggccggggg acccgctccg
     1141 ccagcagctc gctgatgatc gccgcgtcct cgagccggag gcggccgcca gccgccgggc
     1201 tgcccgccgg tcgccattgc cgccactggg cgccccgtcg ccaggcgagg tcgggatcgg
     1261 ccggggtggc gacgtcctcc accgttccgg tcacggcatc gacgatcgac tgcggtgatc
     1321 cgaaggccag cacccggccc tcgtggagca gcacgacgtg gccggcccgt tccgcttcgt
     1381 cgaggtaggc ggtggccacg acgacggccg atccggcagc ggcggcgacc atcaccagac
     1441 gccagatctc catgcggctc cggggatcga cgcccgtcgt gacctcgtcg aggaccagca
     1501 gctccggctc cggcaggagg gccaggatgc cggcgagctt ccgttgctgc ccgccggaga
     1561 ggaccccggc cggccgtccg ccgaccgcgg ccagaccggc ccggtggagg agttcgccgg
     1621 cccggtcccg ccaggcggag aggccgtaga cccgggccac gaagtcgagg ttctcgtcga
     1681 cggtcaggtc cgggaagagc cctccgccga tcgagacgta gccgatccgg cccgggcccg
     1741 ggcggcggac ggatcccccg tcgaccggga tcgcctcggc cagcgcccgg agcagcgtcg
     1801 tcttcccgct gccgtcgccg ccgatgacgg cgtggatgcg tcccggctcg atcgtgaggt
     1861 cgaccccggc gagcgcggcc gtcgacccga accggacgac gaggcccgtc gccccccagc
     1921 tcatgcccca cccgccgggg cgagctcccg ccggaagcgc agcacggaga gggcgaacac
     1981 ggcgacggcc atgaccacga ggacggccag cggaaagcgg agcgcggcga acggcgcggc
     2041 cttcaggagc accgaacgca tcccgacgat gtagtaggtc agcggcatca ccgaagcgat
     2101 ccagcggatc ccggccggca tcgcctggag ggggaagaac atccccgaga ccatgacctg
     2161 cggcaggatt accaggatgg ccagctgcac ggcctcgccc tgggtgcggg aggccgtgga
     2221 gacgaggacg ccgaagccca gcaccgtgaa gaggaacacg agaccgaagg cggcgaagag
     2281 gaccaccgaa ccccggaacg gaacgccgaa gagccacagg cccgccagcg tggcgatcac
     2341 gaggttgagg aaggcgatca cgaagtacgg gacgatcttg ccgacgatga cgtcggccgg
     2401 ccgcaggggt gtgacggcga actgttcgag cgtgccctgc tcccgttccc gcacgacgcc
     2461 caggccggtg atgaacaacc cgacgaagag caggatgaac ccggtgatcg acgggaccat
     2521 caccgctgcg gtgctgaggt tggcgttgta gaggacgtcg acccgggtgt cggggaggcc
     2581 accgaggtgg cgcaacgccg actgggccga gaacagctcc gtcccgtcga tgaggacggc
     2641 gggccgcggc ccgccggcga cgagcacgac gtgggccttc gaatcccgca gcagccggcg
     2701 ggccgccgcc tcgtcacccg acggctgacg ccgcacgacg tcgaaggccg ggccgagcgc
     2761 ccgcaggacc tcgggagacg gcgagccgac cacggcggtg gggatccggg ccacgtcgaa
     2821 ccgggcggca tagccgaaga ccgccagcat gaggaccggc acgacgaaca tcagcgccat
     2881 cgtccgccgg tcgcggcgca tctgccggaa ctccttgacg atcatcgcct gcaccacgac
     2941 ctccgccgcc gaggagcctg atttcaacaa gcgttgagtt cggcatggta gcgtacccgg
     3001 gcatgcggat cgccgtggtc ggcgccggga tcatgggcac cgggatcgcc caggtgttcg
     3061 ccgaagcggg cctggacgtg cggctctacg cccggcggcg ggacagtctt gatcaggccc
     3121 gcgcccgcat cgccgccaac caggccgaga tgcgggcggc cgggctggcg gccgacgacg
     3181 gcgtcctcga ccgggtggtc ggaaccgacg agctcgccga ggccgtgggg gaggcggact
     3241 tcgtctccga gaacgtctcc gaggacatcg gcctgaagca gaagctcttc gccgagctcg
     3301 accgcctggc accggcgtcc gccgtgttgt cgaccaacac gtcggggctc tcgatcacgg
     3361 ccatcgccga ggccacgtcg cgcccggagc gggtcgtcgg gctgcactgg ctcaacccgc
     3421 cccatctcat gcccgtcgtc gaggtctgcc gcggggagcg gacctcggac gaggtgatgg
     3481 aggccacgta cgagctggcc cgtcgggcgg gccgccggcc gatccgggtc gagcgggacg
     3541 tgcccggctt cctcgtcaac cgcctgcagt tcgccctgct ccgggaggcg ttccacatcg
     3601 tcgacgagcg catcgcctcc gccgaggacg tcgaccgcgc ggtgcagggc ggcctcgggc
     3661 tccggtgggc ggccgtcgga ccgttccggg tcgtcgacct cgccgggctc gccaccttcc
     3721 gggccgtggc ggcccagctc ttcccccggc tggccgccga caccgcaccc cccgggatcc
     3781 tggccgagaa gctcgagcgg ggcgagagcg gggcggccgc cgggcggggc ttccacggct
     3841 atccgccggg cgcccacgac gccctcatcg ccgggcgcaa cgcccggctg ctggcgctac
     3901 agcgggcgct ggccgacggg gactgacggc gtcgtccggc gggcgcctcg acggcggggc
     3961 tcgagctccg gcagcccgaa ccggtagagg cggccgatcc gctgcagggc ggcggcgtcc
     4021 tcccagtcga gcgcgcgccg gtacccgtcc caggccaaca gccgctccag agggtcaggc
     4081 atcgggccga atcctttcgc cagccgcggt cctgcgcggt cctgcgctgt cctgatcgga
     4141 cggtagcgac ggatggctcc cccgacacgg tcggaggaca cggacggtgt gtgtccgggg
     4201 cgacacaacc gggcgggccg acccgcggcg acaggggggg cccgaccggc tagaagggcc
     4261 gggtgcacga gcccaggatc accggcgcgt gatcgccgcc attccgtcgc cgccgttcaa
     4321 cgccatccac atcgggcggt tccagctccg cttctacggg ctcatgatcg gcctcggggc
     4381 ggcggcggcc atcgccctgg ccgggcggcg gtgggaagcc cggggcggcc ggtcctccga
     4441 catcggttcg ctggccgtgt gggcgctgcc ggccggcctg gtcggggccc gggcctacca
     4501 cgtgatcacc gatccggagc tgttccgggg ccggtggctg cacgtcttcg ccatctggga
     4561 gggcgggctg ggcatccccg gcgggctgct ggccggggtg gccgtcggcg tcgtcgtggc
     4621 ccggcggcgg ggcctggcga tcgggccgct gctcgacgtg gtggcgccgg ccctcccgct
     4681 ggcccaggcc atcggccggc tcgggaactg gttcaaccag gagctgtacg gccggccgac
     4741 gggcctgccc tggggactcc ggatcgatcc cgcccaccgg ccgccgggcc tggagcaggt
     4801 cgccacctac cagccgacgt tcctctacga ggcgctgtgg aacctggcgc tgatcgccgt
     4861 gctcctgtgg atcgaacggc gccgccgcct ccggcccggg cggctcttcg ccctctacgt
     4921 cggcggctac gccctcggcc ggctgtgggt cgaatcgctg cgcatcgacc acgccaacac
     4981 catcctcggc ctgcgggtga acatctgggt cagcctcctg gccatggccg ccgtggccgc
     5041 cttcttcgcc tgggacggga gccgggcccg gcgcccggcg gcgccggatc ccccagtggc
     5101 ggacggtgat tgaccaatat gggccggtgc agagccgacc cgggccacgg cccgccctgt
     5161 ggctgtcgct gacggcgctc tccctggcgc tccacgcccc cggtttcgtc gttcgcctct
     5221 tcaactccga cgaggcgagc ctggcctcga tggccatggt cctcaaccgg ggcgggacgc
     5281 tctaccacac caccgccgat cgcaagccgc cgatcgtccc ctacgtctac gccttcgtct
     5341 tccggctcac cggctccctc gacatccgct acgtgcgggt ggcggcggcg gtggcggtgg
     5401 ggctggccgc ggcgctgctg gcctccgagg cccgccgccg gtacggcacg gcccgggcc
//
LOCUS       DATGJT010000509         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1416566, whole genome shotgun sequence.
ACCESSION   DATGJT010000509 DATGJT010000000
VERSION     DATGJT010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1416566"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VKX24_08715"
     CDS             <1..756
                     /locus_tag="VKX24_08715"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HLJ08606.1"
                     /translation="KNAILGVAQTALTGVVLAVTTAVTMVFLVLHGPRLVAGAERLIL
                     DDFRRARARRLAVKMQQAVSGYVSGNLFISALAAVVTAVSLVAMSVPFVAVLAAIMFL
                     LDLIPLVGATLGGAVVTAAVFVLDPHGWKALVFVCLFVVYQQVETHTIYPLIMGRTVR
                     ISSLGVFLVTLAGAELGGVLGALVAIPVGAVINVVVQDVLEERRNKAAAVGSAATRLE
                     LAVSARRAQQAMASEAARPGSGMETGGGVEIGG"
     gene            785..1276
                     /locus_tag="VKX24_08720"
     CDS             785..1276
                     /locus_tag="VKX24_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08607.1"
                     /translation="MIRLGSLAGFSFEGPFPLDGWEPPDSPGVFAVMYDADPAAAEYA
                     VVYIGHSDNLRGAGLPFDHPQAACWMERAGSKEALLVAWFMVPGAARAIRRGIASELF
                     AVYEPPCVDDDQPGGGDWEPFQWERPRDDPPPGPSGSGGVREPRRPRPSPISGAVAAE
                     PDN"
     gene            complement(1498..>2521)
                     /locus_tag="VKX24_08725"
     CDS             complement(1498..>2521)
                     /locus_tag="VKX24_08725"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014742430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HLJ08608.1"
                     /translation="PGSASPPAISERRAEAAFSAGLAVVEQLRAGLRPSDIITRKSLE
                     NAIVVVMATGGSTNAVLHLLAIAHEAGIPLDIDNFDAISRKTPHIADLRPAGRFIMAD
                     LDRVGGVPVVMRQLLEAGLLDGDTLSVNGKTLAENVADAPDPDGEVVRDLGKPIHATG
                     GTVILKGSLAPEGAVCKVAGMEGNEFRGRAKVFDGEADAFAAVDSRQIGPGDVVVIRY
                     EGPKGGPGMREMLSVTGAIFGSGLGSQVGLITDGRFSGATHGFSVGHIAPEAAVGGPI
                     GLVQDGDEIVIDVPNRRLDLVVDEGELERRRAAWSPPPARYTRGALEKYARIVSSAAK
                     GAVTTH"
BASE COUNT          348 a          855 c          922 g          396 t
ORIGIN      
        1 aaaaacgcca tcctcggcgt cgcccagacc gccttgaccg gcgtggtgct ggcggtgacg
       61 accgcggtga cgatggtgtt cctggtgctc cacggcccgc ggctggtggc cggggccgag
      121 cggctgatcc tcgacgactt ccgccgggcc cgggcgcggc gtctggcggt gaagatgcag
      181 caggcggtca gcggctacgt cagcgggaac ctgttcatca gcgccctggc ggcggtggtg
      241 accgcggtct cgctcgttgc gatgtccgtc ccgttcgtcg ccgtcctcgc cgccatcatg
      301 ttcctgctcg acctgatccc cctggtcggg gcgaccctcg gcggggcggt ggtgactgcg
      361 gcggtgttcg tgctcgaccc ccacggctgg aaggcgctgg tgttcgtctg cctcttcgtc
      421 gtctaccagc aggtcgagac ccacacgatc tacccgctga tcatgggccg taccgtgcgc
      481 atcagcagcc tgggggtgtt cctggtcacc ctggccgggg ccgagctggg cggggtgctc
      541 ggcgcgctgg tggcgatccc agtgggggcg gtgatcaacg tcgtcgtgca ggacgtgctc
      601 gaggagcggc ggaacaaggc ggccgccgtc gggtcggccg ccacccggct ggagctggcg
      661 gtcagcgccc ggcgggcgca gcaggcgatg gcctccgagg ctgcacgacc cggttccggg
      721 atggaaactg gcggaggagt cgagatcggg ggctgaaact gcgactggca ggcaggctgc
      781 gccggtgatc cgcctcggga gcctcgccgg gttttcgttc gaggggccct tcccgctgga
      841 cgggtgggag ccaccggact cgcccggcgt gttcgccgtg atgtacgacg ccgaccctgc
      901 tgccgccgag tatgcggtgg tgtacatcgg acactccgac aacctgcggg gggcgggact
      961 gccgttcgac catcctcagg cggcctgctg gatggagcga gccggctcga aggaggccct
     1021 gctcgtcgcc tggttcatgg tgcccggcgc ggcccgtgcc atccggcgcg ggatcgccag
     1081 cgagctcttc gctgtgtacg agcccccgtg cgtcgacgat gaccagcccg gcggggggga
     1141 ctgggagccc ttccaatggg agcggccccg agacgacccg ccgcccggac cgagcggttc
     1201 gggcggggtg cgcgaaccgc ggcggccccg gccgagcccg atcagcggtg ccgtagccgc
     1261 cgaacccgac aattagcggt cgacccggtc cagttcatat gcattttgta ttgaaaaacg
     1321 atacggaatg catatgaacg ctgatcgagg gcgcgcgcaa cgggtcgaac gggacaatta
     1381 aggtcgggcc cggcacgtat ttatgcattc tgacgcggaa tccgagtcaa agtgcataaa
     1441 agcaggtcgt ctgaaccggc cgctaagtcc tggatgctcc gtaataatgc ccaggagtca
     1501 gtgcgtcgtc acggctccct tggccgcgct ggagacgata cgggcgtatt tctcgagcgc
     1561 gccgcgggtg tagcgggccg ggggcggcga ccaggccgct cgccggcgct ccagctcccc
     1621 ctcgtcgacg accaggtcca gccgccggtt ggggacgtcg atcacgatct cgtcgccgtc
     1681 ctgcaccagg ccgatcgggc ccccgaccgc cgcctcgggc gcgatgtggc cgaccgagaa
     1741 cccgtgggtc gctccggaga accggccgtc ggtgatcagg ccgacctggg agccgagccc
     1801 cgagccgaag atcgccccgg tgaccgacag catctcccgc atgccgggcc cgcccttggg
     1861 cccctcgtag cggatgacga cgacgtcgcc gggaccgatc tggcggctgt cgacggcggc
     1921 gaaggcgtcc gcctcgccat cgaagacctt ggcccggccg cggaactcgt tgccctccat
     1981 cccggccacc ttgcacaccg ccccctccgg ggcgagcgag cccttgagga tcaccgtgcc
     2041 gccggtggcg tggatcggct tgcccaggtc ccggacgacc tcgccgtcgg ggtcgggggc
     2101 gtcggcgacg ttctcggcca gggtcttgcc gttgaccgac agggtgtcgc catcgagcag
     2161 gccggcctcg agcagctggc gcatcacgac cgggacaccg ccgacgcgat cgaggtcggc
     2221 catgatgaac ctccccgctg gccggaggtc ggcgatgtgc ggcgtcttcc gggagatggc
     2281 gtcgaagttg tcgatgtcga gcgggatgcc cgcctcgtgg gcgatggcca gcaggtgcag
     2341 gacggcgttg gtcgatcccc cggtcgccat caccacgacg atggcgttct ccagcgactt
     2401 gcgggtgatg atgtcgctcg ggcgcagccc ggcccggagc tgctcgacga ccgccaggcc
     2461 ggcgctgaag gcggcctcgg cccgtcgttc cgagatcgcc gggggcgacg ccgacccggg
     2521 c
//
LOCUS       DATGJT010000510         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1515446, whole genome shotgun sequence.
ACCESSION   DATGJT010000510 DATGJT010000000
VERSION     DATGJT010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515446"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /gene="pgi"
                     /locus_tag="VKX24_08730"
     CDS             <1..592
                     /gene="pgi"
                     /locus_tag="VKX24_08730"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011434521.1"
                     /note="functions in sugar metabolism in glycolysis and the
                     Embden-Meyerhof pathways (EMP) and in gluconeogenesis;
                     catalyzes reversible isomerization of glucose-6-phosphate
                     to fructose-6-phosphate; member of PGI family; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HLJ08609.1"
                     /translation="YLQQQDMESNGKSVDLEGKPLDYDSGPVIWGEPGTNGQHAFYQL
                     IHQGTRLIPADFIGFIEPNHEVGEHHDLLMANFFAQTEALAFGKTAEEVAAEGVAPEL
                     VPHRTFPGNRPTNTILAPRLTPSVLGQLIACYEHKVLTQGVIWGINSYDQWGVELGKV
                     LAGRIASELASTGAASGHDSSTDNLIARYRRLRAGR"
     gene            589..1179
                     /locus_tag="VKX24_08735"
     CDS             589..1179
                     /locus_tag="VKX24_08735"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014399384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HLJ08610.1"
                     /translation="MSARGPRVVLVRHGATEWSESGQHTGRTDIPLTDEGRRQAERVA
                     VRLAGEKFALVLVSPLVRARQTARICRYGDAAEVDPDLVEWDYGAYDGRTADDIRRER
                     PGWTPWNGGFPGGETLDEVAARADRVLARVRHVEGDVALFAHGHILRVVAARWLEQPP
                     LEAARYYLATATVSILAWERETAVIELWNDASHLAP"
     gene            complement(1139..1426)
                     /locus_tag="VKX24_08740"
     CDS             complement(1139..1426)
                     /locus_tag="VKX24_08740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08611.1"
                     /translation="MTAKSEPMRMARARSLMAGGFALLAFVAALAAGTAGAPALGGIS
                     WLMVTAGAAGVVYVAGAVLATAVLDLRTHSGRHLRPLPVTARGDSRRSTVR"
     gene            complement(1558..>2270)
                     /gene="bioD"
                     /locus_tag="VKX24_08745"
     CDS             complement(1558..>2270)
                     /gene="bioD"
                     /locus_tag="VKX24_08745"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018600155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HLJ08612.1"
                     /translation="PQRRRDRPGRRRLRRRPGAVIRFVTGTDTGVGKTLAAAALCRAE
                     REAGRTVLYVKPVQTGLEPGEPGDAAFVAAAADIPVVECLRFPDPLAPAVAAERAGAP
                     IDVAALLDDLTKAGDGFDRVIVEGAGGLLVPVAADTTMADLADRLGAGVVVVTRPSLG
                     TLNHTALTVEAAAVRGLPVDGLVVSGWPADPGVTETTNLERLSAMAPVLGLLPAYPGV
                     DTADPTTAPAQLAFLTAP"
BASE COUNT          311 a          835 c          862 g          262 t
ORIGIN      
        1 ttacctccag cagcaggaca tggagagcaa cggcaagtcc gtcgacctag aggggaagcc
       61 gctggactac gacagcggcc cggtcatctg gggcgagcct ggcaccaacg gccagcacgc
      121 cttctaccag ctgatccacc agggcacccg cctgatcccg gccgacttca tcggcttcat
      181 cgagcccaac cacgaggtcg gcgagcacca cgacctgctc atggccaact tcttcgccca
      241 gaccgaggcg ctggccttcg gcaagacggc cgaggaggtg gcggcggagg gggtggcccc
      301 cgagctggtg ccccaccgga cgttccccgg caaccggccg acgaacacca tcctcgcccc
      361 ccggctcacg ccgtcggtcc tcggccagct gatcgcctgc tacgagcaca aggtcctcac
      421 ccagggggtg atctggggga tcaactccta cgaccagtgg ggcgtggagc tcggcaaggt
      481 gctggccggc cgcatcgcct ccgagctggc ctcgaccggc gcggcctccg gccacgacag
      541 ctcgaccgac aacctcatcg cccggtaccg ccgcctccgg gccgggcggt gagcgcccgg
      601 gggccgcggg tcgtcctcgt ccgccacggc gccacggagt ggagcgagag cggtcagcac
      661 accggccgga ccgacatccc gctgaccgac gagggacgcc gccaggcgga gcgggtggcc
      721 gtccggctgg ccggggagaa gttcgccctg gtcctggtga gcccgctggt ccgggcccgg
      781 cagacggccc ggatctgccg ctacggcgac gccgccgagg tcgaccccga cctggtggag
      841 tgggactacg gcgcctacga cggccgcacc gccgacgaca tccgccggga gcgaccgggg
      901 tggacgccgt ggaacggcgg ctttcccggc ggcgagacgc tggacgaggt ggccgcccgg
      961 gccgaccgcg tcctggcccg ggtgcgccac gtcgagggcg acgtcgccct cttcgcccac
     1021 ggtcacatcc tgcgggtggt ggccgcccgc tggctggagc agccgccgct ggaggcggcc
     1081 cgctactacc tggccacggc cacggtctcg atcctcgcct gggagcggga aacggcggtt
     1141 atcgaactgt ggaacgacgc gagtcacctc gcgccgtgac cggcagcggg cggaggtgcc
     1201 gcccggagtg cgtccgcagg tcgaggacgg cggtggcgag caccgctccg gcgacgtaga
     1261 cgacgcccgc cgcaccggcc gtcaccatga gccagctgat cccgccgagg gcgggggcgc
     1321 cggcggtgcc ggcggcgagg gcggcgacga aggccagcag ggcgaacccg ccggccatga
     1381 ggctccgggc tcgggccatg cgcatcggct cgctcttcgc ggtcacgaca aggtgctacc
     1441 cccgggcccg tccgccgaac cccaccgccc ccagccaccg cggtgcattt gccgggtttc
     1501 ccgggaaaat cggccgggcc ggtcccgggg tccccgaacc ggcgttcctg agggctgtca
     1561 gggcgccgtg aggaacgcca gttgggccgg ggcggtggtc gggtcggcgg tgtcgacgcc
     1621 cgggtaggcc ggcagcaggc cgaggacggg cgccatggcc gagaggcgct ccaggttggt
     1681 ggtctccgtg acgcccggat cggccggcca gccggagacg acgaggccgt cgaccgggag
     1741 cccccggacg gcggcggcct cgaccgtgag ggccgtgtgg ttcagcgtgc cgagcgaggg
     1801 gcgggtgacg acgacgacgc cggcgccgag ccggtcggcc aggtcggcca tcgtcgtgtc
     1861 ggcggccacg ggcaccagga gcccgccggc gccctccacg atgacccggt cgaagccgtc
     1921 gccggccttg gtcaggtcgt cgagcagggc ggcgacgtcg atgggggcgc cggcccgctc
     1981 ggccgccacc gccggcgcca gcgggtcggg gaagcggagg cactcgacca ccgggatgtc
     2041 ggcggcggcg gccacgaagg cggcgtcacc cggctcgccc ggctcgagcc cggtctgcac
     2101 cggcttgacg tagaggaccg tccgcccggc ctcccgctcg gcccggcaca gcgccgctgc
     2161 ggccagcgtc ttgccgacgc cggtgtccgt tccggtgacg aaccggatca cggcacccgg
     2221 gcggcggcga aggcggcgac ggcccggtcg atctcggcgt cgctgtgggt
//
LOCUS       DATGJT010000511         2985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_689080, whole genome shotgun sequence.
ACCESSION   DATGJT010000511 DATGJT010000000
VERSION     DATGJT010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689080"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /gene="merB"
                     /locus_tag="VKX24_08750"
     CDS             <1..430
                     /gene="merB"
                     /locus_tag="VKX24_08750"
                     /EC_number="4.99.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF015216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018836 - alkylmercury lyase activity
                     [Evidence IEA];
                     GO_process: GO:0046413 - organomercury catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="organomercurial lyase"
                     /protein_id="HLJ08613.1"
                     /translation="GVHGLTLRPTRHRFVHGDRSHFTWCAFDAVGIPAALALDASVRT
                     RCPACDRPIGVRLTAGRPEPSPAVLWLPAPPVRHLLTEFCAAADLYCSVAHLRGRLDP
                     ARSPGEVLDLNAAADHGRSAWGDVAHLGVGRAGAPGAELW"
     gene            complement(465..1022)
                     /locus_tag="VKX24_08755"
     CDS             complement(465..1022)
                     /locus_tag="VKX24_08755"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08614.1"
                     /translation="MQVRHKFGRLAMAAATGGFMLGMAFLNSGGAHAIGGLCNGEPAS
                     HTWLDASGQYGPAVIDGTKGDDTIIGSDGDDTIDGRGGNDFVCGAAGNDSISVGPGGA
                     SVVRGDTGDDDLTALDVKAVTLVGDGGDDTLEVGNTDATSYVVGGSGDDVLIHDGGGH
                     VKMDGGADFDDCLARGGDELVNCEY"
     gene            1584..1850
                     /locus_tag="VKX24_08760"
     CDS             1584..1850
                     /locus_tag="VKX24_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08615.1"
                     /translation="MRNVAGVLVGVVAEEPVPGRRGRPSTFTVVHNPSPALFILRFSR
                     RLRAGGAWWSEGHQSVSYAVASLARHLQSTDGGSGRHYMTGSRR"
     gene            complement(1861..2280)
                     /locus_tag="VKX24_08765"
     CDS             complement(1861..2280)
                     /locus_tag="VKX24_08765"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HLJ08616.1"
                     /translation="MSVEENKAIIRRYIEVGWSTGDMAAVAEAVDPGYRRHQPNMAMP
                     VESEKELEQLIGMYRAGVPDLDIRIEHLVAEGDWVVTRVICRGTHTGELAGIPPTGKP
                     LEFTASDIFQMAGGKVVESWHNVDDLGLLQQIGVIPS"
     gene            2435..>2985
                     /locus_tag="VKX24_08770"
     CDS             2435..>2985
                     /locus_tag="VKX24_08770"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HLJ08617.1"
                     /translation="MRSTDARDLPDGRATATVLFTDLVASTELRTRVGDQVADELRRR
                     HDRLVADAVGSHGGRVLKGLGDGVMAVFPVAGDAVASAVAIQRALDRLNRTSGALSLQ
                     MRVGLSAGDVMFEGGDCFGTSVIEAARLCAAADAGRILAAEVVSRLVGPAEGHRFRPA
                     GPLTLKGLAGPLPAVEVDWTPETA"
BASE COUNT          388 a         1085 c         1026 g          486 t
ORIGIN      
        1 cggcgtccac ggcctgacgc tgcgcccgac gcgccatcgg ttcgtccacg gcgatcgttc
       61 gcacttcacc tggtgcgcct tcgacgccgt cgggattccc gccgccctgg ccctcgacgc
      121 cagcgtccgc acccgctgcc cggcctgtga ccggccgatc ggcgtccggc tcaccgccgg
      181 ccggccggaa ccgtcgcctg cggtgctctg gcttccggcc ccgcccgtcc ggcatctcct
      241 caccgaattc tgcgccgcgg ccgacctcta ctgcagcgtt gcccacctcc ggggccgcct
      301 cgaccccgct cggtccccgg gggaggtgct cgatctcaac gccgccgccg accacggccg
      361 atcggcctgg ggcgacgtcg cccacctcgg agtcggacgg gcgggcgcgc cgggggcgga
      421 gctctggtga gctccgcccc cggttgtttc ggtgtgtggt gggatcagta ttcgcagttg
      481 acgagctcgt cgccgccgcg ggcgaggcag tcgtcgaagt cggcgccgcc gtccatcttg
      541 acgtggccgc cgccgtcgtg gatgaggacg tcgtcgccgg aaccgccgac gacgtaggag
      601 gtggcgtcgg tgttgccgac ctcgagggtg tcgtcgccgc cgtcgccgac gagcgtgacg
      661 gccttgacgt cgagagcggt gaggtcgtcg tcgccggtgt cgccccggac gacggaggcc
      721 ccgccgggac caacggagat ggagtcgttg cccgccgcgc cgcagacgaa gtcgttgccg
      781 ccccggccgt cgatggtgtc gtcgccgtcg gaaccgatga tggtgtcgtc gcccttcgtg
      841 ccgtcgatga ccgccgggcc gtactggccc gaggcgtcga gccaggtgtg gctggccggt
      901 tcgccgttgc agagcccgcc gatggcgtgg gccccgccgc tgttgaggaa ggccatcccc
      961 agcatgaatc ccccggtggc ggcggccatg gccagccgcc caaacttgtg tcgaacctgc
     1021 atttcgtgtg cctcctatgg acagaaccgc atgatcgcca ccccgcgggt gcgggacggc
     1081 gcgcccggtc cactcccgaa aacaaccgtt ttcgatcgcg ctccccagca ccgtgaaccg
     1141 gacatcttgc cgcccgacac cacaacatcg gacggatatc gtcagggcgt cagcgacgag
     1201 aacgtcggcg ccgttcccca gcggagctca tgggccttgg atgatctctt tcagagccaa
     1261 agccttcaaa aattcccagc gtgctagaag gaattgtccg gtacgcgtcg aatgcagtca
     1321 agcgaagggc tcacctgttt ttcagcgcgc cgctttcgcg ccgcccggcc tgccggcacc
     1381 ccgagcgtcc cggtctgaac ggagtcgaaa ctctcggtgc attcggccgc ggcagggcag
     1441 gagcgcaaca tcccgggccg aagttggaac catcggccgc tgtcgtccgc cccttttcag
     1501 aggcaatcct gatggaactt cccgagggct attccgtcgt ccgaacggtt gaggccggcc
     1561 ggcccccgtg gggccggtgg gaggtgagga acgtcgccgg cgtcctcgtc ggcgtcgtcg
     1621 ccgaggagcc cgtgcccggc cgccggggcc ggccgtcgac cttcaccgtc gtgcacaacc
     1681 cgtcgccggc cctcttcatc ctgcgcttca gtcgccggct gcgggccgga ggcgcctggt
     1741 ggtccgaggg ccaccagagc gtgtcctacg ccgttgcgtc gctggcccgc catctccagt
     1801 ccaccgacgg cgggtccggc cggcactaca tgaccgggtc ccgccgctga cgggacgagc
     1861 tcagctcggg atcaccccga tctgttgcag caggcccagg tcgtcgacgt tgtgccagct
     1921 ctccacgacc ttgccgccgg ccatctggaa gatgtcgctg gcggtgaact ccagcggttt
     1981 gcccgtcggg gggatgccgg ccagctcgcc cgtatgggtg ccgcgacaga tcacccgggt
     2041 cacgacccag tcgccctcgg ccaccaggtg ctcgatcctg atgtccaggt cggggacgcc
     2101 cgcccggtac atcccgatga gctgctcgag ctccttctcg ctttcgaccg gcatggccat
     2161 gttcggctgg tgccggcggt agcccgggtc gacggcctcg gccaccgcag ccatgtcgcc
     2221 cgtgctccaa cccacctcga tgtagcggcg gatgatggcc ttgttctcct cgacggacat
     2281 gacggacgct cctttcgtcg gccgccgatc ctcacctccg gccgggcggg gatcaagccc
     2341 gtgtgtcacg accgggacag tcgtcatgac tggccggcga cagagccggc ccgacgcgct
     2401 cgccgagggc cgcagcgccg gataccgtcg tctcgtgagg agcacggacg cccgcgatct
     2461 gcctgacggc cgggcgacgg ccaccgtcct cttcaccgac ctggtggctt cgaccgaact
     2521 tcgaacccgg gtcggcgatc aggtcgccga cgagctgcgc cggcgccacg accgtctcgt
     2581 cgccgacgcc gtcgggagtc acgggggccg ggtcctcaaa ggtctgggcg acggggtcat
     2641 ggccgtcttc ccggtggcgg gcgacgcggt ggcgtcggcg gtggcgatcc agcgggccct
     2701 cgatcgcctg aaccgcacgt cgggtgcgct ttcgctgcag atgcgcgtcg gattgtcggc
     2761 gggcgacgtc atgttcgagg gcggcgactg cttcggaacc tcggtaatcg aggcggcgcg
     2821 gctctgcgcc gccgccgacg ccgggaggat cctggcggcg gaagtcgtga gccggctcgt
     2881 cgggcccgcc gagggccatc gcttccgacc ggccggcccc ttgactctga agggcctcgc
     2941 cggaccgctc cctgcggtcg aggtcgactg gacccccgag acggc
//
LOCUS       DATGJT010000512         3521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_897705, whole genome shotgun sequence.
ACCESSION   DATGJT010000512 DATGJT010000000
VERSION     DATGJT010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_897705"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..1366
                     /locus_tag="VKX24_08775"
     CDS             281..1366
                     /locus_tag="VKX24_08775"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HLJ08618.1"
                     /translation="MRRGSACVLAVGLLASAGWAGAAGAAPPAKVKVVAAEDFWGSLA
                     RQLGGDRADVTSIISDPDTDPHDYEPKPEDGAAVATAQVAIVNGIGYDGWAAKLLAAN
                     PSASRQVVTVGGVVGVKEGGNPHQWYSPTSVGAVVDAITGALRNADPPHAAYFDARRQ
                     AFTTDGLKRYDDLRARIRAQYAGTPVGASESIFAPLAEDLGLKLLTPEAFLDAVSEGN
                     EPTARDKATVDHQVTGREIKVFVSNAQNSTPDVAVLVDKARAAGIPVVTVTETLAPRG
                     TPFQDWQANQLQSLADALARATGGTDPAVSAARTPAAPPAPGRADRSGPGVPSARWLA
                     LLAVAALVLGGGLLLRAGGRREAHDAC"
     gene            1353..2183
                     /locus_tag="VKX24_08780"
     CDS             1353..2183
                     /locus_tag="VKX24_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019073865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ08619.1"
                     /translation="MTPADSPTVVAAGLSARVAGRALFGGLDVTMEAGRLVAVLGPNG
                     AGKSTFLRMLLGLHPVAGGSLEVLGHRPGRRNHDIGYLPQRRSFDPSVRIRGVDLVRL
                     GIDGHRWGTPVPLLRRLMAPGRDDQERRRLDEVIGRVGAGGYAGRPIGEISGGEQQRL
                     LIAQALVRRPRLLLLDEPLDSLDLPNQQGVAALLQRICADSVTVVIVAHDVNPLLGYL
                     DQVVYIVAGEALAGPPEDVITTATLSRLYGAPVEVIRTPSGRLVVVGQPEAASFHAAH
                     "
     gene            2170..3081
                     /locus_tag="VKX24_08785"
     CDS             2170..3081
                     /locus_tag="VKX24_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018537557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HLJ08620.1"
                     /translation="MPPIDGWPAVLAAGPRLTWDLHRDLHQLLQYPFMRHAFVAGAVA
                     AVMCGAIGWFAVLRGETYAAHTLAVVAFPGASGAVFLGLAPLVGYFAFAVAGAGLIAW
                     LSPPGSGQRERHSATVGAVQAMALALGFWFVSLYRGFLSSLSGFLFGSFLAVTRGDVI
                     VLAVTAAAALGVLAVLGRPLFFASVDARVAEAAGVPVRAVSLVYLVLLGCAVAEASQF
                     TGVLLVLALLVVPAATASALTARPAAGVALSVAFALVTVWAGLAAAYFTDRPVGFWVT
                     SVGFGGYVLARGSAAVRTGWGRRVVVA"
     gene            3078..>3521
                     /locus_tag="VKX24_08790"
     CDS             3078..>3521
                     /locus_tag="VKX24_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018537556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HLJ08621.1"
                     /translation="MTALAGAWAGPLSQDFFRQAFAAGTAAAVAAGLVGSFLVLRNQV
                     FAADALSHVAFTGGLAALALGFAARTGVFGATVAVAVLLAVLGGRARLGDVVTGVVFT
                     WLLGLGVLFLSVFTSSKATGNGAGAVRVLFGSIFGIDAATAARTAW"
BASE COUNT          371 a         1334 c         1289 g          527 t
ORIGIN      
        1 gttgacgcct tcgttggtga tggtgatggt gggattggcc tggtcggcgt gcaacgccgg
       61 agtggcgcgg gcggtatcgg cggagacgaa tccgatgccc gtgaacgaga gcgcggcgat
      121 gacggcggcg acggcgaagt gctttgtagc aggcatgaac gttgacgata gaccggctgg
      181 atcgccctgg caatgggcgc gggcccgcct gacttgaaat gagaatcact tgcaaagtag
      241 tctggtcctc ccctgaggtg gaggcacacg gacgatgcga atgcggcggg ggtcggcctg
      301 tgtcctggcg gtcggcctgt tggcgtcggc cggctgggcc ggtgcggcgg gcgccgcgcc
      361 gccggcgaag gtcaaggtgg tggcggcgga ggacttctgg ggcagcctcg cccgccagct
      421 gggcggcgac cgggccgacg tgaccagcat catctccgat cccgacaccg atccccacga
      481 ctacgaaccg aagccggagg acggggcggc ggtggccacg gcgcaggtcg ccatcgtcaa
      541 cggcatcggc tacgacggct gggcggccaa gctgctggcc gccaacccct cggcgagccg
      601 ccaggtcgtc acggtcggcg gcgtcgtcgg ggtgaaggag ggcgggaacc cccaccagtg
      661 gtactccccg acgagcgtcg gcgccgtcgt ggacgccatc accggggccc tccgcaacgc
      721 cgatccgccc catgccgcct acttcgacgc ccggcgacag gcgttcacga ccgacgggct
      781 gaagcgctac gacgacctcc gggcccggat cagagcgcag tacgccggca cgcctgtcgg
      841 ggcatcggag agcatcttcg cccccctggc cgaggacctc gggctgaagc tcctcacgcc
      901 cgaggcgttc ctcgacgccg tctcggaagg caacgagccg accgcccggg acaaggccac
      961 cgtcgaccac caggtcaccg gcagggagat caaggtcttc gtctccaacg cccagaactc
     1021 gacgcccgac gtcgcggtcc tcgttgacaa ggcccgggcg gcggggatcc cggtggtgac
     1081 cgtcaccgaa acgctcgccc cccgggggac gccgttccag gactggcagg ccaaccagct
     1141 ccagagcctg gccgacgccc tggcccgggc caccggcggg acggacccgg ccgtcagcgc
     1201 cgcccggact ccggcggcgc cgccggcccc gggacgggcc gaccggtccg gtccgggcgt
     1261 cccgtcggcc cgctggctgg cgctcctggc cgttgccgcc ctcgtcctcg gcggcggcct
     1321 cctgctccgg gccggcggcc gccgggaggc gcatgacgcc tgctgattcg ccgacggtgg
     1381 tggcggccgg gctctcggcc cgggtcgccg ggcgggccct cttcggcggc ctcgacgtca
     1441 cgatggaggc cggccggctg gtggcggtcc tcgggcccaa cggggccggg aagtcgacgt
     1501 tcctccggat gctgctcggc ctgcacccgg tcgcgggcgg gtcgctcgag gtcctgggcc
     1561 accggcccgg gcggcgcaac cacgacatcg gctatctccc gcagcggcgc agcttcgatc
     1621 cctccgtccg catccggggc gtcgacctgg tccggctggg gatcgacggc caccgctggg
     1681 ggacgccggt gccgctcctc cgccggctga tggcccccgg gcgcgacgac caggagcggc
     1741 gccggctcga cgaggtgatc ggccgcgtcg gcgccggcgg ctatgccggt cggccgatcg
     1801 gtgagatctc cggcggggag cagcagcggc tgctcatcgc ccaggccctg gtccgccggc
     1861 cccggctgct gctcctcgac gagcccctgg acagcctgga cctgcccaac cagcagggcg
     1921 tcgccgcgct cctgcagcgg atctgcgccg acagcgtgac ggtggtgatc gtggcccacg
     1981 acgtgaaccc gctcctcggt tacctggacc aggtcgtcta catcgtcgcc ggcgaggccc
     2041 tggccgggcc gccggaggac gtcatcacca ccgctacgct cagccggctc tacggcgcac
     2101 cggtcgaggt catccgcaca ccgagcggcc ggctggtcgt cgtcggccag cccgaggcgg
     2161 cgtcgttcca tgccgcccat tgacggctgg ccggccgtgc tggccgccgg cccccgcctg
     2221 acctgggacc tccatcgcga cctccaccag ctcctccagt acccgttcat gcgccacgcc
     2281 ttcgtcgccg gggccgtggc cgccgtcatg tgcggggcca tcggctggtt cgccgtgctc
     2341 cggggcgaga cgtacgccgc ccacaccctg gccgtcgtcg ccttccccgg cgcctcgggc
     2401 gccgtcttcc tcgggttggc cccgctcgtc ggctacttcg ccttcgccgt ggccggcgcc
     2461 gggctcatcg cctggctcag cccgccgggg agcggccagc gggaacgcca ttcggccacg
     2521 gtcggggccg tgcaggcgat ggcgctggcc ctcgggttct ggttcgtgag cctctaccgc
     2581 ggcttcctct ccagcctgag cggattcctc ttcgggtcgt tcctcgccgt gacccggggc
     2641 gacgtgatcg tgctggccgt cacggcggcg gcggcgctcg gggtcctcgc cgtcctcggc
     2701 cgcccgctgt tcttcgcctc ggtcgacgcc cgggtggcgg aggcggccgg cgtcccggtc
     2761 cgggcggtgt cgctcgtcta cctcgtgctc ctcggctgcg cggtggcgga ggccagccag
     2821 ttcaccggcg tcctgctcgt cctggccctg ctcgtcgtcc cggcggccac cgcctcggcc
     2881 ctcaccgccc gtccggcggc cggggtcgcc ctgtcggtgg ccttcgccct cgtcacggtg
     2941 tgggcgggcc tggccgccgc ctacttcacc gaccggccgg tggggttctg ggtcacctcc
     3001 gtggggttcg ggggctacgt cctcgcccgg gggtcggccg ccgtccggac ggggtggggc
     3061 cggcgggtgg tcgtcgcatg acggcgctgg cgggggcgtg ggccggcccg ctgtcgcagg
     3121 acttcttccg ccaggccttc gccgccggga cggccgccgc cgtcgccgcc gggctcgtcg
     3181 gctccttcct cgtgctccgc aaccaggtct tcgccgccga cgccctcagc cacgtggcct
     3241 tcaccggcgg cctggccgcc ctggccctcg gcttcgccgc ccgcaccggc gtcttcggcg
     3301 ccacggtggc ggtggccgtc ctcctcgccg tcctcggcgg gcgggcccgg ctgggcgacg
     3361 tggtcaccgg cgtcgtcttc acctggctgc tcggtctcgg cgtcctcttc ctgtcggtgt
     3421 tcacgtcgtc gaaagccacc ggcaacggcg ccggggcggt gcgcgtcctg ttcggctcga
     3481 tcttcgggat cgacgccgcc accgccgccc ggacggcctg g
//
LOCUS       DATGJT010000513         2692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1515553, whole genome shotgun sequence.
ACCESSION   DATGJT010000513 DATGJT010000000
VERSION     DATGJT010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515553"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..744)
                     /locus_tag="VKX24_08795"
     CDS             complement(<1..744)
                     /locus_tag="VKX24_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012097616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HLJ08622.1"
                     /translation="MATLLAVNVGLPREVTWRGNTVRTGIWKTTVSGRRTVRRLNIDG
                     DGQGDLAGHGGEQRAVLVYQLASYRYWQDHLERDDFTNGQFGENFTVDGLPDDEVCIG
                     DRYRIGTALFEVTQPRVTCYRVGLRMGQPDMAALLVSHQRPGFYLRVLREGDVGAGDD
                     IVKVGADPTGISVADVNALLYLPGHDRARAAVAAAIPALSPGWKASLQALADRPPSSA
                     AGNPGLSAAGGPPPAWSGFRALRVVGVDPE"
     gene            complement(764..1045)
                     /locus_tag="VKX24_08800"
                     /pseudo
     CDS             complement(764..1045)
                     /locus_tag="VKX24_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015626542.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="muconolactone Delta-isomerase family protein"
     gene            complement(1045..1626)
                     /locus_tag="VKX24_08805"
     CDS             complement(1045..1626)
                     /locus_tag="VKX24_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020509008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HLJ08623.1"
                     /translation="MRSDIVPGATFPDYELPDHTDVPCKLSEIQGDDPMILTLARGHY
                     CPKEHQQHLELAAFYPKIAVAYTQVATIATDDHHTLQEFRTSVGAQWPFLSDPGRTVQ
                     KDLDIAEYTDPEHDPMIPHTLVLKPGLVVHSIYNGYWFWGRPSIGDLWRDLRAASAEI
                     RPDWDLSTPGLRQQWDAGDLAAFHGWNKDGKKQ"
     gene            complement(1681..2205)
                     /locus_tag="VKX24_08810"
     CDS             complement(1681..2205)
                     /locus_tag="VKX24_08810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08624.1"
                     /translation="MTPLGALTRGLVAGALGTLAMDGLLYSRYRRGGGDAGFAAWESS
                     AGLEKWDDAPAPAQVGKRLVEGLFDRPLPAERARLVNNVTHWAFGLASGAQYGLVAGS
                     LRNPRLRYGLPFAVGVWATGYVVLPAAKLYRPIWEYDARTLARDLTAHLVYGMGTAAA
                     FRALTAAHGRSADR"
     gene            complement(2209..2643)
                     /locus_tag="VKX24_08815"
     CDS             complement(2209..2643)
                     /locus_tag="VKX24_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007512460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ08625.1"
                     /translation="MKLEVAVVPVTDVDRAKDFYKSLGWRLDADFVGEDDFRVVQLTP
                     PGSSCSVIFGSEVTAAPPGSADLLLAVTDVVAARAELASAGVDVSDVFHDAGGVFHHA
                     GTTDRVPGADPERRSYCSFASFKDPDGNSWTLQELTARLPGR"
BASE COUNT          374 a          914 c         1015 g          389 t
ORIGIN      
        1 ttcggggtcg acgcccacga cccgcagggc ccggaaaccc gaccaggccg gtgggggacc
       61 gccggccgcc gacaggccgg ggttcccggc ggccgacgac ggcggacggt cggccaacgc
      121 ctgcagcgac gccttccagc cggggctgag cgccgggatc gcggcggcga ccgccgcccg
      181 ggcccggtcg tggccgggga ggtagaggag cgcgttgacg tcggcgacac tgatcccggt
      241 cgggtctgca ccgaccttga cgatgtcgtc gccggcgccg acgtcccctt ccctgagcac
      301 ccggaggtag aacccgggcc gttgatggga gacgagaagc gccgccatgt ccggctggcc
      361 catccgaagt ccgacgcggt agcaggtgac cctcggctgc gtcacctcga agagggccgt
      421 tccgatccgg taccggtcgc cgatgcacac ctcgtcgtca gggaggccgt cgacggtgaa
      481 gttctcgccg aactggccat tggtgaaatc gtcccgctcg aggtggtcct gccagtagcg
      541 gtacgaggcg agctggtaca cgaggacggc gcgctgttca ccgccatggc cggcgagatc
      601 gccctggccg tcgccgtcga tgttcaggcg gcgtacggtt cgtcgcccgc tcacggtcgt
      661 cttccagata cccgtccgga cggtgttgcc ccgccacgtc acctctcggg ggaggccgac
      721 gttcacggcg aggagtgtgg ccatctcagt gcggcggtgg agcggggtcg ttggggtggg
      781 gcgccagcgg ggtcacttcg tcggtccgcc agatccgcag cggcatcgag gccagcgcct
      841 tctccagctc ttcgtcgttg tcggccgcga acagcccgag ggtgcgccac tcgcccggct
      901 gcagcggtgg gcgccacagc cggaggaggt ggccttcggc ggcgagctcc gcggcccggg
      961 cggcctcccg gccccggatg gcgtcgatcg cctcgtcggg agtcccgacg gggacgtgcg
     1021 tcgtcatcgt cacgaggtac tccatcactg cttcttgccg tccttgttcc aaccgtggaa
     1081 ggcggccaga tccccggcgt cccactgctg gcgcaggccc ggcgtgctca ggtcccagtc
     1141 ggggcggatc tcggccgacg ccgcccgcag gtcgcgccag aggtcgccga tcgaagggcg
     1201 gccccagaac cagtagccgt tgtagatgct gtggacgacg agccccggct tgaggacgag
     1261 ggtgtggggg atcatcgggt cgtgctcggg gtcggtgtac tcggcgatgt cgaggtcctt
     1321 ctggacggtc cggccggggt cggagaggaa cggccactgg gcgccgaccg aggtccggaa
     1381 ctcctgcagc gtgtgatggt cgtcggtggc gatggtggcc acctgggtgt aggccacggc
     1441 gatcttggga tagaaggcgg cgagctcgag gtgctgctgg tgctccttcg ggcagtagtg
     1501 gccccgggcc agcgtgagga tcatcggatc gtcgccctgg atctcgctca gcttgcaggg
     1561 gacgtcggtg tggtcgggga gctcgtagtc ggggaacgtc gcgccgggga cgatgtcgga
     1621 acgcatggtg gcggcccttt cttgatcagc ggggagcgag gaacaccggt caggcgtctc
     1681 tcaccggtcg gccgaacggc cgtgggcggc ggtcagcgcc cggaaggcgg cggcggtgcc
     1741 catcccgtac acgaggtggg cggtcaggtc ccgggccagc gtcctggcgt cgtactccca
     1801 gatcggccgg tacagcttgg cggccgggag gacgacgtaa ccggtggccc agaccccgac
     1861 ggcgaacggc aggccgtaac gcaggcgggg gttccgcagg gacccggcca cgaggccgta
     1921 ctgggcgccg ctggccaggc cgaaggccca gtgggtcacg ttgttgacga gccgcgcccg
     1981 ctccgccggc agcggccggt cgaagagccc ttccaccagc cgtttaccga cctgtgccgg
     2041 cgcgggggcg tcgtcccact tctcgagccc ggccgacgac tcccaggcgg cgaagccggc
     2101 atcgccgccg ccgcggcggt atcgggagta cagcaacccg tccatggcca gcgtgccgag
     2161 ggcgccggcg acgagccccc gggtcagcgc gccgagcgga gtcatcgctc aacgtcccgg
     2221 gagccgggcg gtgagctcct ggagcgtcca gctgttgccg tcggggtcct tgaacgaggc
     2281 gaaggagcag tagctgcgcc gttccgggtc cgctccgggg acgcggtccg tcgtgccggc
     2341 gtggtggaag acgccgccgg catcgtggaa gacgtcgctg acgtcgacgc cggcgctcgc
     2401 aagctccgcc cgggccgcga ccacatcggt cacggccagc aggagatcgg ccgatccggg
     2461 cggcgcggcg gtgacctcgg agccgaagat cacggagcac gacgaccccg gcggcgtcag
     2521 ctgcaccacc cggaagtcgt cctccccgac gaagtcggcg tcgaggcgcc accccagtga
     2581 cttgtagaag tccttcgccc ggtcgacatc ggtgaccggc acgaccgcca cttcgagctt
     2641 catatccacg ccgcggcagc gtaccggccc ccgccaggcg gcgctcggcc ag
//
LOCUS       DATGJT010000514         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1515585, whole genome shotgun sequence.
ACCESSION   DATGJT010000514 DATGJT010000000
VERSION     DATGJT010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515585"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            588..1049
                     /locus_tag="VKX24_08820"
     CDS             588..1049
                     /locus_tag="VKX24_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020664621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ08626.1"
                     /translation="MNVNRAVPPATVVPILAYPDVRAAVNFLTAAFGFIERTRIGESH
                     RAQLAIGDDGAVIVADCDGERRPPQSGTVTHLVRVRVADVDAAFARARDHGAVVVEAP
                     VDRQYGERDCVLEDLAGHRWQLAQSISDVAPEEFGCETVSPWPAYQSSDPR"
     gene            complement(1161..1562)
                     /locus_tag="VKX24_08825"
     CDS             complement(1161..1562)
                     /locus_tag="VKX24_08825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08627.1"
                     /translation="MTRQAPCGPADAARKARLARAYLDQAEQAATGASDEARTVAAGN
                     AVLAAIAASDALTCLRLGRHSRGQDHAHAAAVLRTIRPDGARHARDLTTVLGVKDAAH
                     YGSVFVSAAALKSTLRAAGRLVDAAETAISA"
     gene            complement(1559..>2086)
                     /locus_tag="VKX24_08830"
     CDS             complement(1559..>2086)
                     /locus_tag="VKX24_08830"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HLJ08628.1"
                     /translation="LGVREVARIAGVSANRASQVLTHLIDHGLVLVEEHGAGRLCRLN
                     RAHLAADALICLVDLRARMLAFLRDEVRSWRRRPLHVSLFGSAARGDGDTRSDLDLLV
                     IRSDDDDDVWDGQLFDSGERILTSTGNRAAWFVTSPPGLRRAVRADEPILGAWRRDGV
                     HLAGRRLEVLIREAA"
BASE COUNT          264 a          763 c          787 g          272 t
ORIGIN      
        1 gacgatcccg ttcccgaccg gcacgcccgc ccgcctccga tcccgcggcg ctccagttgc
       61 tgccaatgcc tcggcgcctc ctacccgtcg acctccgctc caaacccgct gtccgggccg
      121 cccgcccggc gccggggaga acccgtgacg gcatcacggg cgggcgaccc ggcccgggcc
      181 ccccggggtc aagcgaggct ccagccgggg atcggcgatt cgccggtggt gacgtcgggt
      241 ggggctggcc ggagggtgaa gaggccgggt ggcgggatgg tgggggcccg tcccggtccg
      301 tatcgtgatg gacgtgcctc ctacgacttc gtaggaacgc cccaccgcct cgacgaggcg
      361 accgtgacgg ctctccccag cgagccgcct cccgggcccg tcggaggcgg tgtgacgcgt
      421 ccggggcccg ttccggcgca cgacccggcg gcgtcgatgc ccgcccggcg ctcaccggtc
      481 ggcgggaccg ctcgagatga gagactcagc gcgccaccgg ttccggcccc gccggcggtc
      541 gaacggcacg ctctgtcgaa ccaggccgcg ttgaggaggg aacacctttg aacgtcaacc
      601 gcgccgtccc gccggccacg gtcgtgccga ttctggccta ccccgacgtg cgggctgcgg
      661 tgaacttcct gaccgccgcc ttcggcttca tcgagcggac gcggatcggc gagagccatc
      721 gggcccagct cgccatcgga gacgacggcg ctgtcatcgt cgccgattgc gacggcgagc
      781 ggcgtcctcc gcagtcgggc acggtcaccc acctcgttcg ggtccgggtg gcggacgtcg
      841 acgcggcgtt cgctcgagcc cgggaccacg gcgccgtcgt ggtcgaagcg ccggtcgatc
      901 ggcagtacgg cgagcgcgac tgcgtccttg aggatctcgc tgggcaccgc tggcaactgg
      961 cgcaatccat atcggacgtg gcaccggagg agttcggctg cgaaaccgtc agcccctggc
     1021 ccgcgtacca gtcgagcgac ccccgctgac cggcgcggcc ggcgccgccc cgcttgggga
     1081 cgccgtggac cttcccgatg ggccccgggc cggacagccc ctccggcgcc tgagcgtcgt
     1141 gagccggccg gaaggcaccg tcaggcgctg atggcagttt cggcggcgtc gacgagccgg
     1201 ccggcggccc gcagtgtgct cttgagcgcg gcggcggaga cgaagacact gccgtagtgg
     1261 gcggcgtcct tgacgcccag gacggtcgtg aggtctctgg cgtggcgggc cccgtcgggg
     1321 cggatcgtgc gcagcacggc ggcggcgtgc gcgtggtcct ggccgcggct gtgccggccg
     1381 agccggagac aggtgagggc atcggaggcg gcgatggcag ccagcacggc gttcccggcg
     1441 gcgacggtgc gggcttcgtc gctggcaccg gtcgcagcct gctcggcctg gtcgaggtag
     1501 gcccgggcca aacgggcttt gcgggcggcg tcggccggcc cgcagggcgc ctggcgggtc
     1561 acgccgcctc ccggatcagc acctcgagtc gtcggccggc gaggtggacg ccgtcccggc
     1621 gccacgcgcc gaggatcggc tcatcggccc gcaccgcccg ccgcaggccg ggggggctgg
     1681 tgacgaacca ggcggcccgg ttgccggtgg aggttaggat ccgctcgccg ctgtcgaaca
     1741 gctgcccgtc ccacacgtcg tcgtcgtcgt cggagcggat caccagcagg tcgaggtcgc
     1801 tgcgcgtgtc accgtcgccc cgggcggcgg agccgaacag cgacacgtgc agtggccggc
     1861 gccgccacga ccgcacctca tcccgcagga acgcgagcat gcgagcgcgc aggtcgacca
     1921 ggcagatcag cgcgtcggcg gccagatggg cacggttcag tcgacacagc cgcccggcgc
     1981 cgtgctcttc gaccagcacc aggccgtggt cgatcaggtg ggtgaggacc tggctggccc
     2041 ggttggccga cacgccggcg atcctggcga cctcccggac cccgag
//
LOCUS       DATGJT010000515         2419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1106080, whole genome shotgun sequence.
ACCESSION   DATGJT010000515 DATGJT010000000
VERSION     DATGJT010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106080"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="VKX24_08835"
     CDS             <1..535
                     /locus_tag="VKX24_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013837832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HLJ08629.1"
                     /translation="KHVELIVRQMLRRVAVSEPGDSDFLPGEKVDTRVYAETNRRLVE
                     EGKQPAEGRPELMGITKASLATDSWLSAASFQETKRVLTEAAIEGRSDQLLGLKENVI
                     IGKLIPAGTGMLRYRSIETVAPEAQPLPFYSSDTDQDLAEWLRSLGETPSVLGDGTSR
                     IGEAAEPFGLGGTGTEE"
     gene            complement(600..854)
                     /locus_tag="VKX24_08840"
     CDS             complement(600..854)
                     /locus_tag="VKX24_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010587833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /protein_id="HLJ08630.1"
                     /translation="MARTYGERDRARGREATVAWLAEELGELARAARKGTPEEQLHEL
                     GDVLAWLASLADQLGLSLQEAADRYAAGCPRCGALPCRCP"
     gene            complement(982..>2419)
                     /locus_tag="VKX24_08845"
     CDS             complement(982..>2419)
                     /locus_tag="VKX24_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08631.1"
                     /translation="VEHGDTLYDFALAVTGAPERAAAAVREAVPGAVELYGPGVSRAR
                     LLGCVFAVAARDAVPPPSLPAGLVEPGPGSPDELQRVAREATLLLDPAQRGCLDLPLR
                     HGLAGEELSEALGVVPGLASVSVQAATDQAEHVIGAVLLARVARDDCPGLADVTLDAI
                     GVSAEKLAAAVTEHGETCDACGDRRRALVPVTTLLAAVPPVAAPPGLKRSVDLRRRGG
                     IVRALRPPGRAPVSGAVATRPGWRRRRGLVAGVVVAVAVVALVAVLWPRRSGEIARTA
                     APGGRLAVDAAPVDFGATDTQRSLRITNAGRQPLVFQTRAAVPWLSFVGGDGTLDPGS
                     AVVVTAVLNRSRAPEGAAEGEIRIQSNGGSVAVPVRADVERVPELSNVEATPQTVVVR
                     RCPGSTPAQVRVAVVEESGLAAVELHWARPGRAEQVSPMSTDGKSSYRGALGPFDTPG
                     DVRWWVSAADVRDNRAASPPQVLHISGC"
BASE COUNT          318 a          914 c          920 g          267 t
ORIGIN      
        1 caagcacgtg gagctgatcg tccgccagat gctccgccgg gtggcggtgt ccgagccggg
       61 cgactccgac ttcctgcccg gcgagaaggt cgacacccgg gtctacgccg agaccaaccg
      121 ccgcctggtg gaggagggca agcagccggc cgaggggcgt cccgagctca tggggatcac
      181 caaggcctcg ctggccaccg actcctggct gtcggcggcg tcgttccagg agacgaagcg
      241 ggtgctgacc gaggcggcca tcgagggccg ctccgaccag ctgctcggcc tcaaggagaa
      301 cgtcatcatc ggcaagctga tcccggccgg gacgggcatg ctccggtacc ggtcgatcga
      361 gaccgtggcg ccggaggccc agccgcttcc gttctactcg tccgataccg accaggacct
      421 ggccgagtgg ctgcggtcgc tgggtgagac gccttccgtc ctcggcgacg gcaccagccg
      481 gatcggcgag gccgccgagc ccttcggcct cggcgggacc ggtaccgagg agtaagccgg
      541 ccggaccggg cgttcctcag gaacatctgt cgttcctgag gaacgccggt tcggcgcgtt
      601 caggggcacc ggcaggggag cgccccgcag cgggggcagc cggcggcgta gcggtcggcg
      661 gcctcctgga gcgagagccc gagctggtcg gccagcgacg ccagccaggc gaggacgtcg
      721 ccgagctcgt gcagctgctc ctccggcgtg cccttgcggg cggcccgggc cagctcgccg
      781 agctcctcgg ccagccaggc caccgtggcc tcccgccccc gggcgcggtc gcgctccccg
      841 taggtccggg ccatcagctc ctggaaccgc tcgatttcga tgggacaacc ccttcggtcg
      901 ccgccctgcc cggcccaacc ggcgtccgtc taccgggata cagcggaaat ggaacgccgg
      961 ttgagagggg ggcgggggtc gtcagcagcc ggagatgtgc aggacctgcg gcggcgacgc
     1021 cgcccggttg tcgcggacgt cggcggcgct cacccaccag cgcacgtcgc ccggcgtgtc
     1081 gaagggcccg agggcccccc ggtacgacga cttgccgtcg gtgctcatcg ggctcacctg
     1141 ctccgccctg ccggggcggg cccagtgcag ctccaccgcc gccaggccgg actcctcgac
     1201 gaccgccacc cggacctggg ccggcgtcga ccccggacag cggcggacga ccaccgtctg
     1261 gggcgtggcc tcgacgttcg acagctcggg gacccgctcg acgtcggccc ggaccggcac
     1321 ggcgaccgag ccgccgttgg actggatgcg gatctcgccc tcggccgcgc cctccggcgc
     1381 ccgggaccgg ttgaggacgg cggtcaccac gacggcggat cccgggtcca gggtgccgtc
     1441 gccgccgacg aacgacagcc acggcacggc ggcccgggtc tggaacacca gcggctgacg
     1501 cccggcattg gtgatgcgca ggctgcgctg cgtgtcggtg gcgccgaagt ccaccggggc
     1561 ggcgtcgacc gccaggcggc ccccgggggc ggcggtccgg gcgatctcgc cgctgcggcg
     1621 gggccacagg acggccacga gggccacgac cgccacggcg accaccactc cggcgaccag
     1681 cccccgccgt cgccgccagc ccggccgggt tgcgacggcc ccgctcaccg gcgcccggcc
     1741 cgggggccgc aacgcccgga cgatcccgcc ccgccggcgg aggtcgacgc tgcgcttcag
     1801 gccgggcggg gcggcgacgg ggggcacggc ggccagcaac gtcgtgaccg gcaccagcgc
     1861 ccggcgccgg tcgccacagg cgtcgcacgt ctcgccgtgt tcggtgacgg cggcggccag
     1921 cttctcggcc gacaccccga tggcgtcgag cgtgacgtcg gccagccccg gacagtcgtc
     1981 tcgggcgacc cgggccagga ggacggcgcc gatgacgtgc tccgcctggt cggtggcggc
     2041 ctggacggag accgaggcca gccccgggac gacgccgagg gcctcgctca attcctcgcc
     2101 ggcgagcccg tggcgcagcg ggaggtccaa gcagccccgc tgggccgggt cgagcagcag
     2161 cgtggcctcc cgggccaccc gctgcagttc gtcgggggag ccgggcccgg gctcgacgag
     2221 accggccggg agcgaaggcg gagggacggc gtcgcgggcc gccacggcga agacgcagcc
     2281 gagcaagcgg gcccgcgaga cacccggccc gtagagctcg acggcgccgg gcaccgcttc
     2341 ccggacggcg gccgccgccc gctccggggc ccccgtcacc gccagggcga agtcgtagag
     2401 ggtgtcgccg tgctcgacg
//
LOCUS       DATGJT010000516         2539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1515970, whole genome shotgun sequence.
ACCESSION   DATGJT010000516 DATGJT010000000
VERSION     DATGJT010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515970"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..>2539)
                     /locus_tag="VKX24_08850"
     CDS             complement(105..>2539)
                     /locus_tag="VKX24_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HLJ08632.1"
                     /translation="KKFREAMLAADWDTTVAMARDQVKEGAHVLDVCVDYTGADGVAD
                     MTEVAQRLATQASVPLMVDSTESPVVEAALMWVGGRPILNSVNLEEGDDPGTRLDKFL
                     TLAREYGAAVVCTCIDTEGQARTAEWKVGSARAIHDVAVHRYGLEPSDLIFDPLVLPL
                     STGMEESRRDGIETLEGTRRIKDELPGVFTIVGLSNVSFGLSPAARHVLNSMFLHELV
                     DAGLDAAIVHAARIMPLSKIDERAREVCLDLIYDRRREGYDPLQELLAMFEGVSAGAV
                     ETEDRSDWPVERRLEQRIIDGDRNGLEDDLAEALAAGHAALTIVNDFLLAGMKTVGEL
                     FASGEMQLPFVLQSAETMKAAVSYLEPHMEKSDQGGKGTVVLATVKGDVHDIGKNLVD
                     IILTNNGYEVVNLGIKIGIGEMLQAAEERKADAIGMSGLLVKSTLIMRENLEEMNTRQ
                     LSDIPVLLGGAALTRNYVERDLRQVYEGRLFYGKDAFEGLRTMDRLVELKKTGEDDPD
                     FGRVLGGRNLPPRKSQQVVEAVDIPSRSPEVEADNPVFTPPFLGTRVAKGIPIDDIVS
                     YLNQTALFRNQWGYRPLKEGQGGPESDADFKERIGAELREELDKAKAKDLLVPQVAYG
                     YFAANAEGDDVVLWTDETRSSELTRFSFPRQKKEPFLCIADFFRSVESGEPDYGAFML
                     VTMSGKVSEEAAMLYEENRYGEYMKLHGLGVEMAEALAEYWHHRVREEWGFVDEDGPT
                     LTGLFRQQYRGGRYSWGYPACPDLEDNAKVVELLGGDRIGVTVSDGFQMHPEQTTDAI
                     ICHHPKAKYFVA"
BASE COUNT          381 a          855 c          858 g          445 t
ORIGIN      
        1 cgaggcgtag aagggcaagg ccccgtcgtt gaggtcggca cacatgaccg ccgtcaccgt
       61 cgaccgtgcg gcagcgggcg ccaggtggag aggcgccggc tggttcaggc cacgaagtac
      121 ttggccttgg ggtggtggca gatgatggcg tcggtggtct gctcggggtg catctggaac
      181 ccgtcgctca cggtgacgcc gatgcggtcc ccgccgagga gctcgaccac cttggcgttg
      241 tcctcgagat cggggcacgc cgggtagccc cacgagtacc gcccaccgcg gtactgctgg
      301 cggaagagac ccgtgagcgt gggcccgtcc tcgtcgacga agccccactc ctcgcgcacg
      361 cggtggtgcc agtactcggc gagggcctcg gccatctcga ccccgagccc gtgcagcttc
      421 atgtactcgc cgtagcggtt ctcttcgtag agcatcgccg cctcctccga caccttgccg
      481 ctcatcgtca cgagcatgaa ggcgccgtag tccggctcac cggactccac ggagcggaag
      541 aagtcggcga tgcagagaaa cggctccttc ttctgacggg ggaaggagaa gcgggtcaac
      601 tccgacgaac gcgtctcgtc ggtccacagc accacatcgt cgccctcggc gttggcggcg
      661 aagtagccgt aagccacctg gggcacgagg aggtccttgg ctttggcctt gtcgagctcc
      721 tcgcgcaact cggcgccgat gcgttccttg aagtcagcat cgctctcggg gccgccctgg
      781 ccctccttga ggggccgata cccccactgg ttgcggaaca acgcggtctg gttgaggtag
      841 ctgacgatgt cgtcgatggg gatgcccttg gccacccggg tgccgagaaa cggcggtgtg
      901 aacaccgggt tgtcggcctc cacttcgggc gagcgtgacg ggatgtcgac ggcctcgacc
      961 acctgctggc tctttctcgg gggcaggttg cggccaccga ggacgcgccc gaagtcgggg
     1021 tcgtcctcgc ctgtcttctt caactcgacg agccggtcca tggtgcgcag cccctcgaag
     1081 gcgtccttgc cgtagaagag acgtccctcg tacacctggc gcaggtcgcg ctcgacgtag
     1141 ttgcgcgtca gggccgcccc gccgagcagc acggggatgt ccgacagctg gcgggtgttc
     1201 atctcctcga ggttctcgcg catgatgagc gtcgacttga cgagcagccc gctcatgccg
     1261 atggcgtctg ccttgcgctc ctcggcggcc tggagcatct cgccgatgcc gatcttgatc
     1321 cccaggttga cgacttcgta gccgttgttg gtgaggatga tgtcgaccag gttcttgccg
     1381 atgtcgtgca cgtcgccctt gacggtggcg agcacgaccg tccccttgcc gccctggtcg
     1441 ctcttctcca tgtggggctc gaggtacgac acggcggctt tcatggtctc ggccgactgc
     1501 agcacgaagg gcagttgcat ctcgcccgag gcgaacagct cgccgacggt cttcatcccc
     1561 gccaggagga agtcgttcac gatggtgagc gcggcgtgcc cagcagccag cgcctcggcc
     1621 aggtcgtcct cgaggccgtt gcggtcgccg tcgatgatgc gctgctcgag gcggcgctcg
     1681 acgggccaat cggagcggtc ctcggtctcc accgcgcccg ctgagactcc ctcgaacatc
     1741 gccagcagct cctggagcgg gtcatatccc tcgcgccggc ggtcatagat gaggtccagg
     1801 cacacctcgc gtgcccgctc gtcgatcttc gacagcggca tgatgcgcgc cgcgtgcacg
     1861 atggcggcgt cgaggccggc gtcgaccaat tcgtggagga acatcgaatt gagcacgtgg
     1921 cgtgccgccg gcgagaggcc gaacgacacg ttcgacagac ccacgatggt gaacaccccg
     1981 ggcagctcgt ccttgatgcg cctggtgccc tcgagggtct cgatgccgtc gcgccgactc
     2041 tcctccatgc ccgtcgacag cgggagcacc agggggtcga agatgaggtc ggagggttcg
     2101 aggccgtagc ggtgcacggc cacgtcgtgg atggcacgcg ccgagcccac cttccactcc
     2161 gccgtgcgcg cctggccctc agtgtcgatg cacgtgcaca ccacggcggc gccgtactcg
     2221 cgcgccaagg tcaagaactt gtcgagacgt gtgccggggt cgtcgccctc ttcgaggttc
     2281 accgagttga ggatgggacg cccgcccacc cacatgaggg cggcctccac cacgggcgac
     2341 tcggtggagt cgaccatgag cggcacgctg gcctgggtgg cgaggcgctg ggccacctcg
     2401 gtcatgtccg ccaccccgtc ggcgccggtg tagtcgacgc acacgtcgag gacgtgcgcc
     2461 ccttccttca cctggtcgcg cgccatggcc acggtggtgt cccagtcggc cgcaagcatg
     2521 gcctcacgga acttcttgg
//
LOCUS       DATGJT010000517         3700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_795281, whole genome shotgun sequence.
ACCESSION   DATGJT010000517 DATGJT010000000
VERSION     DATGJT010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3700
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795281"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VKX24_08855"
     CDS             <1..399
                     /locus_tag="VKX24_08855"
                     /inference="COORDINATES: protein motif:HMM:NF022059.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HLJ08633.1"
                     /translation="SRGGGLGCGAVAVLPAGACGVAEATRVMGWLAGETAGQCGPCVH
                     GLAALAGTLGEACAGRSRGDVAARLQRWAAQIEGRGACRFPDGAVRFLRSALDVFADD
                     LRRHAAGRPCRGSLQRPILPIPPTKEAPWR"
     gene            390..620
                     /locus_tag="VKX24_08860"
     CDS             390..620
                     /locus_tag="VKX24_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020661630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HLJ08634.1"
                     /translation="MAVSYRIIVDPIACTGHGVCADMLPERITLDDWGYPIIDGRPLD
                     GDVLRHARRTVTACPALALRLEKAVRDGADAR"
     gene            610..1287
                     /locus_tag="VKX24_08865"
     CDS             610..1287
                     /locus_tag="VKX24_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08635.1"
                     /translation="MLARTRPEAGKGVEPPEPPRPDPGVEANRRLTSVTGMVLLVLLA
                     AQGYTVPQVRRLLTLHVFLGVVLVGPVLLKTASTGYRFVRYYRGDRAYRDSGPPAPLL
                     RLLGPFVIASTFVLLGSGIALIVAGPAHRPLFLRLHQASFVLWFAAMTVHVLGHLREA
                     ALTTWRELRARPEEPTGRRRRLRVVLVAGALVVGVGLAGALAPRAAHWTNDRFLIHGQ
                     AQKLPRP"
     gene            1574..2254
                     /locus_tag="VKX24_08870"
     CDS             1574..2254
                     /locus_tag="VKX24_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08636.1"
                     /translation="MAGDEDPGLQALIVINGVTELDRWGGFARSPNDLLNPDMPLIPA
                     GDGSSISRAVQRCGCGDVGCGNVTFTIRRAGEVIEWSDARDRDRPIEDIGPFRFDAVQ
                     YEAEIRTAHREREWETREERVARLVTDALRDQRNGRPVSFGWATGQEGHVTVYVQEWR
                     PNPRAGETTEYADGTVVFEDDELWDNHLGYFAIPTLDDSAAVDAILNQIRSVPPVRWR
                     RPPDLPHG"
     gene            complement(2597..3169)
                     /locus_tag="VKX24_08875"
     CDS             complement(2597..3169)
                     /locus_tag="VKX24_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015622144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ08637.1"
                     /translation="MGEPNEIEKLVRTRLRSLRNTLGLSLDELAERSNLSPSTISRIE
                     TGKRTISLDVLLPLAAALQVDLDALLDLRRDDDVVIRPMPNHAGGRTTWMLSRPTGST
                     LAVKMRLEPTRRAPQQKVHPGHDWFFVVEGRVRLSLGEREITVETGEAAEFATMTPHA
                     FAAIDRPAELIMIFDRDGQRAHVHQEGGAG"
     gene            3242..>3700
                     /locus_tag="VKX24_08880"
     CDS             3242..>3700
                     /locus_tag="VKX24_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016884445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ08638.1"
                     /translation="MSEHTPRTVERHCDVAVIGGSAAGLAAALQLGRQRRSVIVVDAG
                     EPRNAPAAHMYGYLSRDGLPPSELTAIGREEVRSYGGEVVAGRAGRVTRTDDGRFRVE
                     LVGGHSVVGRRVLAAIGLVDELPNIDGVAEHWGGDVIHCPFCHGFEVRDRR"
BASE COUNT          522 a         1355 c         1277 g          546 t
ORIGIN      
        1 tcccgggggg gcgggctcgg ctgcggggcg gtggccgtcc tgcccgccgg cgcctgcggc
       61 gtcgccgaag ccacccgagt gatgggctgg ctggccgggg agaccgccgg acagtgcggt
      121 ccctgcgtcc acggcctcgc cgccctggcc ggcacgctgg gcgaggcctg cgccgggcgg
      181 tcccggggcg acgtcgccgc ccgactgcag cgctgggcgg cccagatcga gggccgcggc
      241 gcctgccgct tcccggacgg ggccgtccgg ttcctgcgca gcgccctcga cgtcttcgcc
      301 gacgacctcc gccgccacgc cgccggccgc ccctgccggg gatccctgca gcgtccgatc
      361 ctgcccatcc ccccgaccaa ggaggccccg tggcggtgag ctaccgcatc atcgtcgacc
      421 cgatcgcctg caccggccac ggcgtctgcg ccgacatgct ccccgagcgg atcaccctcg
      481 acgactgggg ctacccgatc atcgacggca gacccctcga cggcgacgtc ctccgccacg
      541 cccgccgcac cgtcaccgcc tgcccggccc tcgccctccg gctggagaag gccgtccggg
      601 acggcgccga tgctcgctag gacccggccc gaggccggca agggcgtcga gcctccggag
      661 ccgcctcggc ccgaccccgg cgtcgaggcc aaccgccgcc tgacatcggt caccgggatg
      721 gtgctgctgg tcctgctggc cgcccagggc tacaccgttc cccaggtccg ccgcctgctc
      781 accctgcacg tcttcctcgg cgtggtgctc gtcggcccgg tgctcctcaa gacggcgagc
      841 accgggtacc gcttcgtccg ctactaccgc ggcgaccggg cctaccgcga cagcggcccg
      901 cccgcgccgc tgctccggct cctcggcccg ttcgtgatcg cctcgacctt cgtgctcctc
      961 ggcagcggca tcgccctgat cgtcgccgga ccggcgcacc ggccgctgtt cctccgcctc
     1021 caccaggcga gcttcgtgct gtggttcgcc gccatgaccg tccacgtcct cgggcacctg
     1081 cgggaggcgg ccctgaccac ctggcgggaa ctccgggcga ggcccgagga gcccaccggc
     1141 cgacggcggc gcctgcgcgt cgttctcgtc gccggcgccc tcgtcgtcgg cgtcggactc
     1201 gccggggccc tggccccccg agcggcgcac tggaccaacg accgcttcct gatccacggt
     1261 caggctcaga agctccccag gccctgacga tcgggcggcg ggcccgtcgt cagttcacgt
     1321 cccggcgcag ggtgagaaag gcgccgagcg ccgcggcggc cgcgccccaa gcgaggagtg
     1381 ttaacaccgg ctgaaaactc accccctggc accgggtgga ttcgagtggt cgttcgctcg
     1441 ccaaaatgcc gtgcgtgccg tcgacgggac cgggcatcat cgagtggtgg acgaacttcg
     1501 gatcgttgtc actcgcggtg gggaccgacc tcccggcgtg cgtcgcccgg ctgattcgcg
     1561 cgccggtgcc aatatggcgg gcgacgagga ccccggcctc caggcgctga tcgtcatcaa
     1621 cggcgtcacg gaactcgatc gatggggtgg gttcgcgagg agtccgaacg atctcctcaa
     1681 ccccgacatg ccgctgattc cggcggggga cggttcgtcc atcagcagag cggtccaacg
     1741 ctgcgggtgc ggcgacgtgg gctgcggcaa cgtcaccttc acgatccgcc gggcgggcga
     1801 agtaatcgag tggagcgacg cccgagacag agaccggccc atcgaggaca tcgggccttt
     1861 ccgcttcgac gctgtccagt acgaggcaga aattcgcacg gcccaccggg aacgggagtg
     1921 ggagacgcga gaggagcggg tcgcccggct cgtcaccgac gcccttcggg atcagcggaa
     1981 tggccggccc gtgtccttcg gatgggcgac cggccaggag gggcacgtga cggtctatgt
     2041 gcaggaatgg cgacccaacc cccgtgccgg agagaccacc gagtacgcgg acgggacggt
     2101 ggtctttgag gacgacgaac tctgggacaa ccacctcggc tacttcgcga tccccaccct
     2161 cgacgactcc gcggcggtcg acgccatcct gaatcagatc cggtccgtac caccggtccg
     2221 ctggcggcga ccgccggact tgccccacgg ctgaaccaca acccggtgca gatctacacc
     2281 tccgagcgca cgtcgctgat cgaagctggg agcgaaacga ccaccttccg gtcgtttcgc
     2341 tcccgggatc gctcggcgct atcgagaacc gcccgctcgg tactgccgga gagcggagcg
     2401 agttcgcgac aacatccact acagcggaaa ccggggtctc ggcagagcag gggcgcagac
     2461 cgcaggtagg ccccgggctg accggctcgg ggccgccggg ccgatccttt gaaatagcca
     2521 cgtcgaaggt cgccggcttg gtcaacgacg tgccggttcg acgccgaact ctccttatgg
     2581 gagggtcacg accccgctaa ccggctccgc cttcctggtg gacatgggca cgctggccgt
     2641 cgcggtcgaa gatcatgatg agctcggctg ggcggtcgat ggcggcgaag gcgtggggcg
     2701 tcatggtggc gaactcggcg gcctcgcccg tctcgacggt gatctcgcgt tcgccaagcg
     2761 acagccgcac ccgcccctcg acgacgaaga accagtcgtg accgggatgg accttctgct
     2821 gcggcgcccg ccgggtcggc tcgagtcgca tcttgacggc gagcgtgctg ccggtcggcc
     2881 ggctcaacat ccaggtggtc cgcccgcctg cgtggttcgg catcggacgg atcaccacgt
     2941 cgtcgtcgcg gcgcaggtcg agcagcgcgt caaggtcgac ctggagggct gcggcgagcg
     3001 gcagcaggac gtcgaggctg atggtccgct tgccggtctc gatccggctg atggtggacg
     3061 ggctgagatt ggaacgctcg gcgagctcgt cgagtgacag acccagcgtg ttgcgcagac
     3121 tccgcagccg ggtccggacc aacttctcga tctcgttcgg ttcgcccatg ccaccctccc
     3181 ggtcttgcga atatcgcaag acgtgctgcg cttttggaaa gggaactgta tcgtcgccgg
     3241 catgagcgaa cacactcccc gcaccgtcga acggcactgt gacgtcgccg tcatcggcgg
     3301 atccgccgcc ggactggccg ccgccctcca actcggccgc cagcgccggt ccgtgatcgt
     3361 cgtagacgcc ggcgagcccc ggaacgcgcc ggccgcccac atgtacggct acctcagtcg
     3421 cgacgggctt ccgccgtcgg aattgaccgc catcggccgc gaggaggtcc gcagctacgg
     3481 cggcgaggtc gtcgccgggc gcgccggccg ggtgacccgc accgatgacg ggcgcttccg
     3541 tgtcgaactc gtgggtgggc attccgtcgt gggccgccgg gttctggccg ccatcggtct
     3601 ggtggacgag ttgccgaaca tcgacggggt cgccgaacac tggggcgggg acgtcatcca
     3661 ctgtccgttc tgccacggtt tcgaggtccg cgaccggcgc
//
LOCUS       DATGJT010000518         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1106149, whole genome shotgun sequence.
ACCESSION   DATGJT010000518 DATGJT010000000
VERSION     DATGJT010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106149"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VKX24_08885"
     CDS             <1..504
                     /locus_tag="VKX24_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013673792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-disulfide reductase"
                     /protein_id="HLJ08639.1"
                     /translation="PHGVSNVPLQGLSGSHAYAQGKVAGTNAAGGRRRYQPVYVPWGM
                     VAGKWMIGGVSFGETLATALGIPYVLGKAQGISRARYYPDMKKITVKLLAEPKTLRLI
                     GAQMVGGEGIKERADFLAMAVKVGITLEDLAWMENVYSPPIGALNEPIALAAQNGLAN
                     AAAASKA"
     gene            506..784
                     /locus_tag="VKX24_08890"
     CDS             506..784
                     /locus_tag="VKX24_08890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08640.1"
                     /translation="MDLKAKARLGSRWLRSNSEHFLLLDAQARMAAAQGRPGPPRPRG
                     AKEVFWLRVFAPTYRRLPWKVRSALIQAMPGSHRQHWTPPAQRRNPAI"
     gene            821..1309
                     /locus_tag="VKX24_08895"
     CDS             821..1309
                     /locus_tag="VKX24_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002058090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MSMEG_0572/Sll0783 family nitrogen starvation
                     response protein"
                     /protein_id="HLJ08641.1"
                     /translation="MPKTVNVPRPADGEVLYDVEEKVFEDIRANPGEQAFVFIHSVPY
                     ECSVALVNLLTATRLVRKGFDVKIVLYGPGVLLGSGTRGYPGVNQEAFPGHLAINNQI
                     KTLLKEGATIYACRFAMGALYGFREDDLIDGIKPFNPLDVLDSALTAWRAGAFQINTW
                     TV"
     gene            1387..2067
                     /gene="nthB"
                     /locus_tag="VKX24_08900"
     CDS             1387..2067
                     /gene="nthB"
                     /locus_tag="VKX24_08900"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018562101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit beta"
                     /protein_id="HLJ08642.1"
                     /translation="MDGIHDMGGMQGWGTVPFDPTEPAFKKGWEGRAFAMSLLSMNRL
                     TGANLDAMRHALERQPPLEYLRNGYYGRWLLLSETLLTDSGVLAVGAVDARARKLRGE
                     DVTEPPDPELSKPDYTATAPGSLRPVDDPPRFKVGDLVRAKDIHPDGHTRLPRYVRGR
                     IGTVWRIQPSALLPDTNAHFLGENPQHCYGVTFKSDVLWGESAESFDLNIDLFDDYLE
                     PAPEEVGS"
     gene            2064..>2392
                     /locus_tag="VKX24_08905"
     CDS             2064..>2392
                     /locus_tag="VKX24_08905"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018562102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HLJ08643.1"
                     /translation="MSPVPAPSDLPVELRTEALESILVEKGLVDPAVLDKFIKTYAED
                     VGPLNGAKVVAKAWTDPEYKERLLEDGTAAIAEMGFKGPQGECIVVLENTPTVHHLVV
                     CTLCSCYP"
BASE COUNT          383 a          877 c          792 g          340 t
ORIGIN      
        1 ccgcacggcg tctccaacgt gccgctgcag ggcctgtcag gcagccacgc ctatgcccag
       61 ggcaaggtgg cgggcaccaa cgccgccggc ggacggcgcc gctaccagcc ggtctacgtg
      121 ccgtggggca tggtggccgg caagtggatg atcggcggcg tctccttcgg cgagacgctg
      181 gccactgcgc tcgggatccc ctacgtgctg ggcaaggccc aggggatctc ccgggcccgc
      241 tactaccccg acatgaagaa gatcacggtc aagctcctgg ccgagccgaa gacgctccgc
      301 ctcatcggcg cccagatggt cggcggcgag ggcatcaagg agcgggccga cttcctggcc
      361 atggcggtca aggtcggcat cacgctcgag gacctggcct ggatggagaa cgtgtactcg
      421 ccgccgatcg gggccctcaa cgagccgatc gccctggccg cccagaacgg cctggccaac
      481 gccgccgcgg cgtcgaaggc ctgacgtgga cctgaaggcg aaggcccgtc tcggctcccg
      541 atggttgcgg agcaactccg agcacttcct gctcctggac gcgcaggccc gtatggccgc
      601 cgcccagggg cggcccggcc cgccccgccc ccggggggcg aaggaggtgt tctggctccg
      661 ggtcttcgct ccgacctatc gtcgcctccc gtggaaggtc cggtcggccc tcatccaggc
      721 catgccgggc agccaccggc agcactggac gcccccggca cagcgacgca accccgcgat
      781 ctagttccgc ccaccgaacc gacagcgtga ggagaatccc atgccgaaga ccgtcaatgt
      841 cccccgcccg gctgacggcg aggtcctgta cgacgtcgag gagaaggtct tcgaggacat
      901 cagggccaac cccggagagc aggccttcgt cttcatccac agcgttccct acgagtgctc
      961 ggtcgctctc gtcaacctgc tgacggccac ccgcctcgtc cgtaagggct tcgacgtcaa
     1021 gatcgtgctc tacggaccgg gtgtgctcct cggctccggc acccgcggct acccgggcgt
     1081 caaccaggag gccttccccg gccacctggc catcaacaac cagatcaaga ccctcctcaa
     1141 ggagggggcg acgatctacg cctgccggtt cgccatgggc gccctctacg ggttccggga
     1201 ggacgacctc atcgacggga tcaagccctt caacccgctc gacgtcctcg actcggcgct
     1261 caccgcctgg cgggcgggcg ccttccagat caacacctgg acggtctgat cggtatcggg
     1321 atcgtggggc gcccggcccg agcgagggcc gggcgcctta cgtccgtctg acacgaggag
     1381 gtggcggtgg acgggatcca cgacatgggc ggcatgcagg gctgggggac ggtccccttc
     1441 gacccgacgg agccggcgtt caagaagggc tgggaaggcc gggcgttcgc catgagcctc
     1501 ctgtcgatga accggctgac cggcgccaac ctcgacgcca tgcgccacgc cctcgaacgc
     1561 cagccgccgc tcgagtacct gcgcaacggc tactacggcc ggtggctgct cctgtcggag
     1621 acgctgctca ccgacagcgg cgtgctggcc gtcggggcgg tcgacgcccg ggcgcgcaag
     1681 ctccggggcg aggacgtcac cgaaccgccc gatccggagc tgagcaagcc cgactacacc
     1741 gccaccgccc ccggctcgct gcggccggtc gacgacccgc cccggttcaa ggtcggcgac
     1801 ctcgtccggg ccaaggacat ccatcccgac ggccacaccc ggctgccccg ctacgtccgg
     1861 gggcggatcg ggacggtgtg gcgcatccag ccctcggcgc tgctgcccga caccaacgcc
     1921 cacttcctcg gcgagaaccc gcagcactgc tacggcgtga cgttcaagtc cgacgtgctg
     1981 tggggcgagt ccgccgagtc gttcgacctc aacatcgatc tgttcgacga ctacctggag
     2041 cctgcccccg aggaggtcgg gtcatgagcc ctgttcccgc tccctcggac ctgcccgtcg
     2101 agctgcggac cgaggccctc gagtcgatcc tcgtcgagaa gggcctcgtc gaccccgcgg
     2161 tcctcgacaa gttcatcaag acctacgccg aggacgtcgg cccgctcaac ggcgccaagg
     2221 tcgtggccaa ggcctggacc gacccggagt acaaggagcg cctgctggag gacggcacgg
     2281 ccgccatcgc cgagatgggc ttcaaggggc cgcagggcga gtgcatcgtc gtgctggaga
     2341 acacgccaac ggtgcaccac ctcgtggtct gcacgctgtg ctcgtgctat cc
//
LOCUS       DATGJT010000519         2869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_478997, whole genome shotgun sequence.
ACCESSION   DATGJT010000519 DATGJT010000000
VERSION     DATGJT010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478997"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..973
                     /locus_tag="VKX24_08910"
     CDS             <1..973
                     /locus_tag="VKX24_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08644.1"
                     /translation="AKVDSTTLAAAHKEGRDAVRGAFKELEVHGYYRRDIVRLPDGTL
                     RTEVVVSNTPMEAAEGNGAGRAEDGSSGSGPTPEDPAPVDPAPVDPTSVEPAPVDQAP
                     KDQVPTTEALFPPHPPRRAGGHEVSGAGAEPEPSPAGPPGGAERLPRAPSVARDGEQR
                     TAGRRSRALGTNPRAEADRAEQAHREARADARRAEVERATQERRSAERAAAVESERLE
                     AEARAVSAALDDASLAAVVAAVRPAMSGPLAVSGMAVARAVVGWCRCAVTSHGGDLAA
                     AVAAGLAAGSTTVGEGTAPPLALPVAPPGTAPLRSRIAALLKPVGEV"
     gene            982..2352
                     /gene="dnaB"
                     /locus_tag="VKX24_08915"
     CDS             982..2352
                     /gene="dnaB"
                     /locus_tag="VKX24_08915"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013121789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HLJ08645.1"
                     /translation="MRVPSSDVDPPDGKQRSPHRVPPQSLEAEESLLGAMLLSRDAIA
                     AAVETVSAEDFYRPAHAHLFEAIVTLYGAGEPVDPTTVAEALRRAGVLEGLGGKQAVL
                     RIQVGTPAASNAGFYARIVADHALLRRLVAVGSEIAELGYTLPGDVTEVLDRAESLVF
                     EVANRRQTTSLRGIHATLQDSLAHLEALFDHAGATTGVPTGFRDLDELLLGWQPSNLI
                     VLAARPGQGKTAFALGTATYAAVTVARPVVFFSLEMGCLELTQRILSSEAAVNSRSLR
                     TGRIPEGDWSKISTAVGRLAEAPLFIDDNPHLTVMDMRAKCRRLKAQHGDLGLVVVDY
                     LQLMSTGRRAENRQVEVSELSRGLKVLARDLDVPVLALSQLNRSLEYRADKRPMLADL
                     RESGALEQDADVVAFIYRDDAYHPDSTERGTAEVIIAKHRNGPTGKIRLAFLEHLTRF
                     TGLARN"
     gene            complement(2607..>2869)
                     /locus_tag="VKX24_08920"
     CDS             complement(2607..>2869)
                     /locus_tag="VKX24_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08646.1"
                     /translation="QLSVLATDVGRREKVHELQAEGHDCNAGGVASHDRRGGFRLSGD
                     GQRTKRRPTASLVPGPIDKAVETVRNTESDVHNKLSELSKIR"
BASE COUNT          403 a         1029 c         1028 g          409 t
ORIGIN      
        1 cgccaaggtg gactccacca cgctggcggc cgcccacaaa gagggccggg acgccgttcg
       61 cggcgccttc aaggagctcg aggtccacgg ctactaccgc cgcgacatcg tccgccttcc
      121 cgacggaacg ctgcgcaccg aggtggtcgt gagcaatacg ccgatggagg ccgccgaagg
      181 caacggtgct ggtcgcgccg aagacggatc ttcaggctcc ggcccgacgc ctgaagatcc
      241 ggcgccggtc gatccggcgc cggtcgaccc gacgtcggtt gaaccggcgc cggtcgatca
      301 ggcgccaaaa gatcaagtac cgacaaccga agcactgttt cccccccatc ccccccgcag
      361 ggcggggggg cacgaggtat ccggagcagg tgcagagccg gagccttccc ccgcaggccc
      421 tcccggcggg gccgaacggc tcccgcgggc gccatcagtc gcccgtgacg gggagcagcg
      481 cacggccggt cgacgctccc gggcgctggg gacgaacccc cgggcggagg ccgaccgggc
      541 cgagcaggcc caccgggagg cgcgggccga cgcccgccgg gccgaggtgg agcgggcgac
      601 gcaggaacgc cgctcggcgg agcgggcggc ggcggtggag tcggagcggt tggaggcgga
      661 ggcgcgggcg gtgtcggcgg cccttgacga cgccagcctg gccgcggtgg tcgccgcggt
      721 gcgcccggcc atgtcggggc cgttggccgt gtcggggatg gccgtggccc gagcggtggt
      781 cggctggtgc cgttgcgccg tcacctccca cggtggcgac ctggccgccg ccgtcgccgc
      841 cggcctcgcc gccggctcga cgacggtggg ggaggggacc gccccgccgc tggcgcttcc
      901 ggtggccccg cccgggacgg cgccgctgcg gagccgcatc gccgcgctgc tcaagccggt
      961 cggtgaggtg tagcgatggt catgcgtgtc cccagttccg acgtcgaccc gcccgatggg
     1021 aagcagagaa gcccccaccg tgtcccgccg cagagtctcg aggcggagga gtcgttgctg
     1081 ggggcgatgc tgttgtcgcg cgacgccatc gccgccgcgg tggagacggt gtcggcggag
     1141 gatttctacc ggccggccca cgcccatctc ttcgaggcga tcgtgacgct ctacggggcg
     1201 ggggagccgg tggatccgac cacggtggcc gaggcgttgc gtcgggccgg ggtgctggag
     1261 gggctgggtg ggaagcaggc ggtgctgcgg atccaggtcg ggacgccggc ggcgagcaac
     1321 gccgggttct acgcccgtat cgtcgccgac cacgccctgc tgcgccggtt ggtggcggtg
     1381 ggttcggaga tcgccgagct cggctacacc cttcccgggg acgtgaccga ggtgttggac
     1441 cgggccgagt cgctggtctt cgaggtggcc aaccgccgcc agacaacgtc gctgcggggc
     1501 atccacgcaa ccctgcagga ttcgctcgcc cacctcgagg cgctcttcga tcacgccggc
     1561 gcgacgacgg gggtccccac cggtttccgg gatctggatg agttgctgct cggctggcag
     1621 ccgtcgaacc tcatcgttct ggccgcccgc cccgggcagg gcaagacggc cttcgccctc
     1681 ggcaccgcga cgtatgccgc cgtcaccgtg gcccggccgg tggtgttctt ctcgctggag
     1741 atgggctgtc tcgagctgac gcaacggatc ctgtcctccg aagcggccgt gaattcgcgc
     1801 tccctgcgga cgggccgtat ccccgaaggc gactggtcga agatctccac cgccgtgggc
     1861 cgcctggccg aggccccgct gttcatcgac gacaaccccc acctcacggt gatggacatg
     1921 cgggccaagt gccgccgcct caaggctcag cacggcgacc tcggactcgt cgtggtcgac
     1981 tacctccagc tgatgtcgac cggccggcgg gccgagaacc gccaggtcga ggtgtccgaa
     2041 ctctcccggg gcctcaaggt cctggcccgc gacctcgacg tccccgtcct cgccctctcc
     2101 cagctcaacc gctcactgga gtaccgggcc gacaaacgcc ccatgctcgc cgacctccgc
     2161 gagagcggcg ccctggaaca ggacgccgac gtcgtcgcct tcatctaccg cgacgacgcc
     2221 taccaccccg acagcaccga acggggcacc gccgaggtca tcatcgccaa gcaccgcaac
     2281 ggaccgaccg gcaagatccg cctcgccttc ctcgaacacc tgacccgctt caccggtctg
     2341 gcgcgaaact gatcgaggtg gcgccgcccg gtctctcgtg acggccggcc gggcattcat
     2401 tcggcggccc gttccacccc aatcccctca tggggagacc cgccactgtc caagcgatct
     2461 gggcctctcg ccgtcgcagc tgaacaggag tctcgtatac cgggctcaga agagccggaa
     2521 tgccggccgg ccgggtgagt ccggcgcgct gggagcaggc gccgatgcga atgggttaga
     2581 cgcccaacgg tcgtcagccc cggggcctac cgaatcttcg acagctcgct gagcttgttg
     2641 tggacgtcgc tctcggtgtt gcggacggtt tcgacggcct tgtcgatcgg ccccgggacg
     2701 agactggccg tgggccgacg tttcgtgcgc tggccgtcgc cggagaggcg aaagccgccc
     2761 cgcctgtcat gagaagcgac gccgccagcg ttgcaatcgt ggccctccgc ttgcagttca
     2821 tggaccttct cgcgtcgtcc gacgtccgtg gcgaggaccg agagctgcg
//
LOCUS       DATGJT010000520         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_586477, whole genome shotgun sequence.
ACCESSION   DATGJT010000520 DATGJT010000000
VERSION     DATGJT010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_586477"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1459)
                     /locus_tag="VKX24_08925"
     CDS             complement(29..1459)
                     /locus_tag="VKX24_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020574659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HLJ08647.1"
                     /translation="MGKRRRRRRSLLALGLVVAVAALTGAARPRDGFDRRSGRLESAL
                     LRAIRAQQFDQVVDFGPVEGACPGSSWCPSPAPPIAHTPNIDLAVIALDGRGRPRAVA
                     DVLLSRDYPDGVGVPVGDDLGTDDVRWRRWNPDRWNGGTFSEKDGSRASTVGWKDNPP
                     FTAADDIAPGREKAALEFMEPYPASMFKLMVAFQTLRLVDRGTIDLDRPYRYDPPDGP
                     AMSRTTRDLLDRMITESDNDSARALVKQLHDLGEMDALNATFSDLDLGTLQVRGTDPA
                     TGANWGVGQITMTSLDTARLLLLINGAPGVLWRTPAGKAVRADVLSPDSRRLFAGLLA
                     DQGWNDVLTTSNWCGRSYPTPGIPSRVADRWVDPGTGTVTVADKAFGQDVRPCNADAE
                     VSFAHKTGFTYNYLSDGGIVHSLNGEDGDYIVVMMSNLGYRYSDARQAGVSHPVCGED
                     PGQDTGVCYTEKFAALGRAVDDIVRR"
     gene            complement(1579..2313)
                     /locus_tag="VKX24_08930"
     CDS             complement(1579..2313)
                     /locus_tag="VKX24_08930"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08648.1"
                     /translation="MSGAATYTRYELLRTFRSTRFFLFSLVFPLLLYYVIAGGNRHTK
                     LAGIPMPLYFMTGMAGWGAMMAVVSTGTRISAERQTGWNRQLRITPLSVSAYFRAKVL
                     TGYMMALLSIVLLYGAGLTLGVHLAPAKWLSMTVLILIGLIPFNVLGILLGHLLTADA
                     VGPAVGGIVSLFALFGGMWGPLGDSGFMHSFSQSLPSFWLVEAGRSALGGELWPGKGW
                     LVIGLWTVVLGRLAARAYRRDTQRQT"
BASE COUNT          368 a          854 c          883 g          336 t
ORIGIN      
        1 cccggcgctg gccccggggc tggcggccct accgccggac gatgtcgtcg accgcccggc
       61 cgagcgcggc gaacttctcc gtgtagcaga cgccggtgtc ctgcccgggg tcttcgccgc
      121 acaccggatg gctcactccc gcctggcggg catcgctgta gcggtagccg aggttcgaca
      181 tcatcaccac gatgtagtca ccatcttcac cgttgagcga gtgcacgatc ccgccgtcgg
      241 acaggtagtt gtaggtgaag ccggtcttgt gggcgaacga cacctcggcg tcggcgttgc
      301 agggccgcac gtcctgcccg aaggccttgt cggccaccgt caccgtgccg gtaccggggt
      361 cgacccagcg gtcggccacc cggctcggga tccccggcgt cggatacgac cggccgcacc
      421 agttggaggt ggtgaggacg tcgttccagc cctggtcggc cagcagcccg gcgaagagcc
      481 gccgggagtc gggcgagagg acgtcggccc gcacggcctt cccggccggc gtccgccaca
      541 gcacacccgg tgcgccgttg atcagcaaca ggagacgggc ggtgtcgagc gaggtcatgg
      601 tgatctggcc caccccccag ttggcgccgg tggccgggtc ggtcccgcgc acctgcagcg
      661 ttccgaggtc gaggtcggag aaggtggcgt tgagggcgtc catctcgccg aggtcgtgga
      721 gctgcttgac gagcgcccgg gccgaatcgt tgtccgactc ggtgatcatc cggtcgagca
      781 ggtcccgggt ggtgcggctc atggccggcc cgtcgggcgg gtcgtagcgg taggggcggt
      841 cgaggtcgat ggtcccgcgg tcgaccagcc gcagcgtctg gaaggccacc atcagcttga
      901 acatcgacgc cgggtagggc tccatgaact ccagcgccgc cttctcccgg ccgggggcga
      961 tgtcgtcggc ggcggtgaac ggcgggttgt ccttccagcc caccgtcgag gcccgcgacc
     1021 cgtccttctc cgagaacgtg ccgccgttcc agcggtcggg gttccagcgc cgccaccgca
     1081 cgtcgtcggt gccgaggtcg tcgccgacgg ggacgccgac gccgtcgggg tagtcccgtg
     1141 agagcagcac atcggccacc gcccgcgggc gtccccggcc gtcgagggcg ataaccgcca
     1201 ggtcgatgtt gggggtgtgg gcgatcggcg gcgccggcga ggggcaccag gaggacccgg
     1261 ggcaggcgcc ttccaccggg ccgaagtcca ccacctggtc gaactgctgg gcccggatcg
     1321 cccggaggag cgcggactcc agccggccgg aacggcggtc gaacccgtcc cggggacggg
     1381 cggcgccggt cagggccgcc accgccacga cgaggccgag cgccagcagc gaacgccgcc
     1441 gccgtctccg cttccccatg cgcggtgcgt cctttcccgg ccgggtcgct ccacctcggc
     1501 tcatcgtatt gagtcgtgcc cgaatccatg gggaccacaa cgccgttaag aaaagcctga
     1561 ggcccccatg agggtcggct acgtctggcg ctgcgtgtcc cgccggtagg cccgggcggc
     1621 cagccggccg agcaccaccg tccagagccc gatgaccagc cagcccttcc ccggccacag
     1681 ctcgccgccg agggccgagc ggcccgcctc caccagccag aaggagggca ggctctgcga
     1741 aaagctgtgc atgaaccccg agtcccccag cgggccccac atcccgccga agagggcgaa
     1801 gagcgacacg atcccgccca cggcggggcc gacggcgtcg gcggtcagca gatggccgag
     1861 caggatcccg agcacgttga aggggatcag cccgatgagg atgagcaccg tcatgctcag
     1921 ccacttggcc ggtgccaggt gcaccccgag cgtcagcccg gcgccgtaga gcaggacgat
     1981 gctgagcagc gccatcatgt agccggtcag caccttggcc cggaagtagg ccgacaccga
     2041 cagcggcgtg atgcgcagct gacggttcca gccggtctgg cgctcggccg agatgcgggt
     2101 gccggtcgag accaccgcca tcatcgctcc ccagccggcc atgccggtca tgaagtacag
     2161 cggcatcggg atgccggcga gcttcgtgtg ccggttgccc ccggcgatga cgtagtagag
     2221 gaggagcggg aacaccagcg agaagaggaa gaagcgggtg ctgcgaaacg tccgcaggag
     2281 ctcatagcgg gtgtaggtgg cggccccgct catctcgcct cctcgacgcc gacgtcgccg
     2341 acgttgccga aatcggtttc cgtgccgggg gcggtgagct cgaggaaggc ctgctccagc
     2401 ccggcgccgg tcacctcgat gtcgcgggcc tccgggtagg c
//
LOCUS       DATGJT010000521         2663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_586575, whole genome shotgun sequence.
ACCESSION   DATGJT010000521 DATGJT010000000
VERSION     DATGJT010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_586575"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /gene="carB"
                     /locus_tag="VKX24_08935"
     CDS             complement(<1..776)
                     /gene="carB"
                     /locus_tag="VKX24_08935"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399683.1"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HLJ08649.1"
                     /translation="MPRRDDLHSILLIGSGPIVIGQACEFDYSGTQACKVLKEEGLRV
                     ILVNSNPATIMTDPELVDATYVEPITPDVIEQVIARERPDACLPTLGGQTALNAAMEL
                     DRRGVFARYGVELIGARPAAIATAEDRRQFREAMEEIGMDLPRSGFAYTVEEVRAVVD
                     EIGLPVVLRGSFVLGGGGSGIAATREELERMAGEALAASPISEVLVEESIAGWKEYEL
                     EVMRDRADNVVIVCSIENFDPMGVHTGDSITVAPAQTLTD"
     gene            complement(922..1668)
                     /locus_tag="VKX24_08940"
     CDS             complement(922..1668)
                     /locus_tag="VKX24_08940"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HLJ08650.1"
                     /translation="MSDRVPATPGFWVALDAMGVLYRQRGISALLVGLARARGVMVTE
                     SAARDAYRQASRGLLDAPSLWQTLGVPPGETPGLDAELVAGRSLTPGARGFLADMRAE
                     GIGVGCITNDLASWSAAARRVNKLEEDVEPWVVSAEVGVRKPGREIYEAFVAASGCEP
                     ARCLFVDDTVENLEAARRFGFQTVWFGADPPGGRLGTLGSRTGSRAGSHDGTAGHRRV
                     GSFEELAACITPYLDRSEQNDQPEQLEQEG"
     gene            complement(1665..>2663)
                     /gene="carA"
                     /locus_tag="VKX24_08945"
     CDS             complement(1665..>2663)
                     /gene="carA"
                     /locus_tag="VKX24_08945"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HLJ08651.1"
                     /translation="TYPHIGNYGVVAEDEEGRRPHAAGFVIRDLPVRWSSWRGTGSLE
                     EYLATWGIPGIAEVDTRRLTRHLRSAGAMRGALAPGDADAAAVATALAGHPSMAGADF
                     VRTVTAGEPYEWAPSPGDPPAGFRVAAYDFGIKTSILRQLTAHGCAVTVYPAATPAEE
                     LLGAGVDGVFMSNGPGDPEAVRYGIAAIGSLVGRIPVFGICLGHQLLGLSLGLPTFKL
                     PFGHHGVNHPVARLADAQVEITTQNHGFAVRAEPFGFAAPDAPGRALPSGLTAPTAHG
                     RAELTHVNLNDYTVEGFRLLDEPAFAVQYHPEAGPGPHDARYLFDSFCQLMRGSPR"
BASE COUNT          354 a          987 c          948 g          374 t
ORIGIN      
        1 ttgtcggtca aggtctgcgc cggggccacg gtgatgctgt cgccggtgtg gacgcccatc
       61 gggtcgaagt tctcgatgga gcagacgatg accacgttgt cggcccggtc gcgcatcacc
      121 tccagctcgt actccttcca gccggcgatc gactcctcga ccagcacctc ggagatcggc
      181 gaggccgcca gcgcctcacc cgccatccgc tccagctcct cgcgggtggc ggcgatgccc
      241 gaccccccgc ccccgagcac gaacgacccg cgcagcacca ccggcagccc gatctcgtcg
      301 acgaccgccc gcacctcctc gacggtgtag gcgaagccgg agcggggcag gtccatgccg
      361 atctcctcca tcgcttcgcg gaactggcgt cggtcctcgg cggtggcgat cgccgccggc
      421 cgggccccga tcagctcgac gccgtagcgg gcgaacaccc cccgccggtc cagctccatc
      481 gccgcgttga gcgcggtctg gccgcccagg gtcggcaggc aggcgtccgg ccgctcccgg
      541 gcgatcacct gctcgatgac gtcgggtgtg atcggctcga cgtaggtggc gtcgaccaac
      601 tccgggtcgg tcatgatcgt cgccgggttg gagttgacca ggatcactct cagcccctcc
      661 tccttcaaca ccttgcacgc ctgcgtgccc gagtagtcga actcgcaggc ctgcccgatg
      721 acgatcgggc ccgagccgat cagcaggatc gagtggaggt cgtcgcggcg gggcataggg
      781 gtggccggcg ggcggtcggg tacgcctcag cccttgcggg cagcggcgcg ggcgcgggcc
      841 tggcgggcgg tgcgggcctt cttcgcccgt tgccggtcct tcttccagcg ggtcttgcgg
      901 cgatctcctc gtcccatggt cctatccttc ctgttcgagc tgctcgggtt gatcattctg
      961 ctcactgcga tcaaggtacg gcgtgataca tgcggcaagc tcttcgaaac tgcccacacg
     1021 gcggtgcccg gcggtgccgt cgtggctccc cgcacggctg ccggttcggg acccgagggt
     1081 ccccagacgg cccccgggtg gatcggcgcc gaaccatacc gtctggaagc cgaaccggcg
     1141 cgccgcctcc agattctcga ccgtgtcgtc gacgaacagg caccgggccg gctcgcagcc
     1201 ggaggccgcg acgaacgcct cgtagatctc ccgtcccggc ttgcggacgc cgacctcggc
     1261 cgagacgacc catggctcga cgtcctcctc aagcttgttg acccgccggg cggcggccga
     1321 ccagctggcc aggtcgttgg tgatgcaccc gaccccgatc ccctccgccc tcatgtcggc
     1381 caggaacccc cgggcgccgg gcgtcagcga gcggccggcg accagctcgg cgtccagacc
     1441 gggcgtctcg ccgggcggca ccccgagcgt ctgccacaag ctgggggcgt cgagcagccc
     1501 gcggctggcc tgccggtagg catcccgggc ggcggactcg gtcaccatca ccccccgggc
     1561 gcgggccagc cccaccagga gggcggagat cccccgctgc cggtacagca cccccatcgc
     1621 gtcgagggcc acccagaagc ccggcgtcgc cggcacccgg tcgctcaccg gggcgaaccg
     1681 cgcatcagct ggcagaagct gtcgaacagg tagcgggcat catgggggcc ggggccggcc
     1741 tccgggtggt actgcaccgc gaaggctggt tcgtcgagca gccggaaccc ctcgaccgtg
     1801 tagtcgttca ggttgacatg ggtgagctcg gccctcccgt gcgccgtcgg tgcggtcagc
     1861 ccggacggga gcgccctgcc cggggcgtcc ggcgcggcga agccgaatgg ctcggcgcgg
     1921 acggcgaatc cgtggttctg ggtggtgatc tcgacctggg cgtcggccag ccgggcgacc
     1981 gggtggttga ccccgtggtg gccgaacggg agcttgaagg tcgggagccc cagcgacagg
     2041 ccgagcagct ggtggccgag gcagatcccg aacaccggga tccggccgac gagcgacccg
     2101 atcgcagcga tgccgtagcg gaccgcctcc gggtcgcccg gaccgttgga catgaagacc
     2161 ccgtccaccc cggcgccgag cagctcctcg gccggcgtcg ccgccgggta gaccgtcacc
     2221 gcgcacccgt gggcggtcag ctggcgcagg atgctggtct tgatcccgaa gtcgtaggcg
     2281 gccacccgga acccggcggg cgggtcgccc ggggagggcg cccattcgta gggctcaccg
     2341 gcggtcaccg tgcggacgaa gtcggccccg gccatcgagg ggtgcccggc cagcgcggtg
     2401 gcaaccgcgg ccgcatcggc gtcgcccggg gcgagggcgc cgcgcatcgc cccggccgac
     2461 cgcaggtgcc gggtcagccg gcgggtgtcg acctcggcga tgcccgggat cccccaggtc
     2521 gccaggtact cctctaggct cccggtgccc cgccacgacg accagcggac cggcaggtcc
     2581 cggatcacga agccggcggc gtgcgggcgc cgcccctcct cgtcctcggc gacgacgccg
     2641 tagttgccga tgtgcgggta ggt
//
LOCUS       DATGJT010000522         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_898933, whole genome shotgun sequence.
ACCESSION   DATGJT010000522 DATGJT010000000
VERSION     DATGJT010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898933"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..992)
                     /gene="hemC"
                     /locus_tag="VKX24_08950"
     CDS             complement(105..992)
                     /gene="hemC"
                     /locus_tag="VKX24_08950"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018465518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HLJ08652.1"
                     /translation="MAGLRIATRGSRLALWQAERVAGLLGADAELVIVSTTGDQRADV
                     PIWTIGGTGVFVKEVQQAVLDGRADLAVHSAKDLPSETAAGLRLAAVPERADPRDALV
                     GARLDDIPAGGRVGTGSVRRQAQLAALRPDLGFASLRGNIETRVAKAAEFDAVVVALA
                     ALERLGLADRAAEVLDPSVMLPQVAQGALAVECRADDAETVERLRAIDEPAARRAVEA
                     ERAFLRRLGGGCDLPCGALARAEGSDGGAVAIDVLLATLDGKAVLRASHRAADPEAAG
                     AEAARILLDEQGGRRLLER"
     gene            complement(1015..>2033)
                     /gene="hemA"
                     /locus_tag="VKX24_08955"
     CDS             complement(1015..>2033)
                     /gene="hemA"
                     /locus_tag="VKX24_08955"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HLJ08653.1"
                     /translation="AEHVYSYYDEAAVAHLFGVAAGVDSVILGEGQILGQVRDALRVA
                     EEEGTAQQGLARIFRHAIEVGKRSRAETGIGRGAVSLSSAAVALAAERLGTLVERRVL
                     VLGAGEMGEGMARSLAGSGVAELAVAGRGTERSTELAIRVGGRAIPIEQLPQALVAAD
                     LVLTSTGAVEVVITQEEAELAMQRRFGRPLLIIDIAVPRDVDPGVADVPGVTLLDMDD
                     LKAFAESSMDRRRREVARVRRIISAELERLRAGRTAREVAPLVSALRSRGEDIRLAEL
                     ERFRSKLDAVDPRTAETIEALTRGIVAKLLHEPTVRVKEAAGSGRGELYADALSALFG
                     LDPE"
BASE COUNT          263 a          793 c          742 g          235 t
ORIGIN      
        1 aataccacga tgcgcccccc tcggcggacg ggacggcttc ccctgcccat cccgcatacc
       61 agacggtaat acgaacgggt gacgcccgtc aggtcagcgt cacatcatct ctcgagaagc
      121 cgccgtccgc cctgctcgtc gagcaggatc cgggccgcct cggcgccggc cgcctcggga
      181 tcggcggcgc gatggctggc ccgcagcacg gccttgccgt caagggtggc cagcagcacg
      241 tcgatggcga cggcgccgcc gtcggagccc tccgcccggg ccagggcgcc gcagggcagg
      301 tcgcagcccc cgccgaggcg gcggaggaag gcgcgttcgg cctcgaccgc ccgccgggcg
      361 gcgggctcat cgatcgcccg caggcgctcg accgtctcgg cgtcgtcggc ccggcactcc
      421 accgccaggg cgccctgtgc gacctggggc agcatgaccg acgggtcgag gacctccgcc
      481 gcccggtcgg cgagccccag ccgttccagg gccgccaacg ccaccacgac ggcgtcgaac
      541 tcggccgcct tggccacccg ggtctcgatg ttcccccgca acgaggcgaa gcccagatcg
      601 ggccggaggg cggccagctg ggcctggcgg cggacggacc ccgtccctac ccggcccccg
      661 gccgggatgt cgtcgaggcg agcgccgacg agggcgtcgc ggggatcggc ccgctccggg
      721 acggcggcca gccgcagccc ggcggcggtc tccgacggga gatccttggc cgagtgcacg
      781 gcgaggtcgg cccggccgtc gagcaccgcc tgctggactt ccttgacgaa cacgcccgtc
      841 cccccgatgg tccagatggg gacgtcggcg cgctggtcgc cggtggtcga gacgatcacc
      901 agctcggcgt cggcgcccag gaggccggcg acgcgctcgg cctgccagag ggccagccgg
      961 ctgccgcggg tggcgatgcg caggccggcc atgggccccg ctctccgggc tcccctactc
     1021 cgggtcgagg ccgaagaggg cgctcagggc gtcggcgtac agctcgccgc gcccgctgcc
     1081 ggccgcttcc ttcacccgga cggtcggctc gtggaggagc ttggccacga tcccccgggt
     1141 cagcgcctcg atggtctcgg ccgtccgggg gtcgacggcg tcgagcttgg accggaagcg
     1201 ctccagctcg gcgagacgga tgtcctcccc ccgggaccgc aacgccgaga ccagcggggc
     1261 gacctcgcgg gcggtgcgac cggcccgcaa ccgctcgagc tcggcggaga tgatccgccg
     1321 cacccgggcc acctcccggc gccggcggtc catcgagctc tcggcgaagg ccttgaggtc
     1381 gtccatgtcg aggagggtga cgccggggac gtcggcgacg cccgggtcga cgtcgcgggg
     1441 gacggcaatg tcgatgatca gcagcggccg gccgaagcgc cgctgcatcg ccagctccgc
     1501 ctcctcctgg gtgatcacga cctcgaccgc tcccgtcgag gtgagcacga ggtcggcggc
     1561 caccagcgcc tggggcagct gctcgatcgg gatcgcccgg ccaccgaccc ggatggccag
     1621 ctcggtggaa cgctccgttc cccggccggc gacggcgagc tcggccacgc cggaaccggc
     1681 cagcgagcgg gccatgccct cgcccatctc gccggctccg agaacgagca cccggcgctc
     1741 caccagggtg ccgagccgct cggcggccag cgccaccgcc gccgacgaca gcgacaccgc
     1801 cccccgcccg atgccggtct cggcccgcga ccgcttcccc acctcgatgg cgtggcggaa
     1861 gatccgcgcc aggccctgct gggcggtgcc ctcctcctcg gcgacccgga gggcgtcgcg
     1921 gacctggccc aggatctggc cctcgccgag gatgaccgag tcgacgccgg cggccacgcc
     1981 gaacaggtgg gcgacggcgg cctcgtcgta gtagctgtag acgtgctcgg cga
//
LOCUS       DATGJT010000523         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_69224, whole genome shotgun sequence.
ACCESSION   DATGJT010000523 DATGJT010000000
VERSION     DATGJT010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69224"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VKX24_08960"
     CDS             <1..474
                     /locus_tag="VKX24_08960"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLJ08654.1"
                     /translation="NRRYMDEPLQRELARAGRNHSSVAVLAIDVDHFKAFNDAYGHPA
                     GDALLTSLGALLRDRIRSEDIACRSGGEEFNVILPDCGRDAAVERADALRVAVKGLEV
                     GVRGRSYGGVTISVGVALFPGNGADSGTLLHEADAALYRAKAGGRDRVCLSQAAV"
     gene            596..748
                     /locus_tag="VKX24_08965"
     CDS             596..748
                     /locus_tag="VKX24_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08655.1"
                     /translation="MRLTTQQRRSATGQVVETMEQLSDGLRHTDAALYEAKQSGRILV
                     MSKPDR"
     gene            complement(1001..1579)
                     /locus_tag="VKX24_08970"
     CDS             complement(1001..1579)
                     /locus_tag="VKX24_08970"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLJ08656.1"
                     /translation="MRYRLKLGAGALAVLSVLTIGCGKKGSSDATDVGKTLNAGLQAH
                     AAHHLSEAVTAYQTVLKADKTNKFALYNLGLIAQDSGHSDEAESRYQMTLDVDPKYEP
                     AIYNLAVLRSDKGDLAGAITLYRRALAVNPNDANSHLNLGLLLKRNNDTAGGDAEIQT
                     AIALNPKLRPAPAPLAAPGSTTSNAATGAESH"
     gene            complement(1661..>2012)
                     /locus_tag="VKX24_08975"
     CDS             complement(1661..>2012)
                     /locus_tag="VKX24_08975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08657.1"
                     /translation="PQGPAGAVGATGPAGPPGAQGTPGSAGAKGDTGTSGVMTSVVKT
                     AVGTTSASVQCDTGMIALGGGGDAGANGLTRSAPINSGGSVASAGSVPTGWNVTAAGP
                     VTVYAICANGTPAV"
BASE COUNT          317 a          673 c          712 g          310 t
ORIGIN      
        1 aaccggcgct acatggacga gccgctccag cgggagctcg cccgggccgg ccgcaaccac
       61 agctccgtgg ccgtcctcgc catcgacgtc gaccacttca aggccttcaa cgacgcctat
      121 ggccacccgg cgggcgacgc cctgctcacc agcctgggag cgctgctgcg ggatcgcatc
      181 cggtcggagg acatcgcctg ccggtccggc ggcgaggagt tcaacgtgat cctccccgat
      241 tgcgggcgcg acgccgccgt cgagcgggcc gatgcactgc gggtggcggt gaagggcttg
      301 gaggtcgggg tccggggccg cagctacggc ggggtgacga tctcggtcgg cgtcgccctg
      361 ttccccggca acggcgccga ttccggaacc ctgctccacg aggccgacgc cgccctctac
      421 cgagcgaagg ccggaggccg cgaccgggtg tgcctcagcc aggccgccgt ctgagccggc
      481 tcacgatggg cacgacgagc accaacgcca cggtcatggc catggagaaa ggggccaaga
      541 aagatgcagc agggggctcg gcctgctcga aagcgtcacc gacgccaccg tccaggtgcg
      601 tctcaccacc cagcaacgac gctccgccac cggccaggtc gtcgaaacga tggaacagct
      661 cagcgacggg ttgcgccaca ctgacgccgc cctctacgag gccaagcaat caggccgcat
      721 cctcgtgatg tccaagccgg accgctgagt accgggtcgc cgtgccgacc gaccctggtt
      781 cgtgctccgc aacggcgacc cggctctgct cgaagcacgg gccggatcgg ggaccggcga
      841 ggcagcaaga ccccacctca cctcttagga gaatgatgcc tgggtcgcga gtatctgcgg
      901 tctcaaaaga gccgtcgatc ctgtcgggcg aagtcagcgg cgacggagcg actgctggcc
      961 gtacccggcc ggaccgatca gagaaccacc cgagcggtgg tcaatggctc tcggccccgg
     1021 tcgccgcatt ggaggtcgtg gaaccgggtg ccgcgagcgg cgccggggcg ggccggagct
     1081 tagggttgag ggcgatggcg gtctggatct cggcgtcgcc accggccgtg tcgttgttcc
     1141 gcttgaggag aagaccgagg ttcaggtgcg agttggcgtc gttgggattg acggcaagcg
     1201 cccgccggta gagcgtgatc gccccggcca ggtcaccttt gtcggatcgc aggacggcga
     1261 ggttatagat ggccggctcg tacttcgggt cgacgtcgag ggtcatctgg taccgggact
     1321 cggcctcgtc ggagtggccg gagtcctggg cgatgagacc gaggttgtaa agggcgaact
     1381 tgttcgtctt gtcggccttc aggacggtct ggtaggccgt gaccgcctcg ctcaggtgat
     1441 gagcggcgtg agcttggaga cccgcattca gggtcttccc gacgtcggtt gcatcgctgc
     1501 tgcccttctt gccacagcca atggtgagga cgctcagaac cgccagggcg ccagcgccga
     1561 gcttcagccg atacctcatg cggtctcctt ggtggttcga aggggcggcc tcccacaggg
     1621 gggaagccgc cccttcattg tgcctattcg aaacgatggg tcagacggcg ggggtgccgt
     1681 tggcacagat ggcatacacc gtcaccgggc ctgccgccgt gacgttccac ccggtcggta
     1741 cgctcccggc cgaggccacg gaacctccac tgttgatcgg agcggagcgg gtgaggccgt
     1801 tggcgccggc gtcaccgccg ccaccgaggg cgatcatccc ggtgtcgcac tggactgaag
     1861 cggacgtggt tccgaccgcg gtcttcacta ccgaggtcat cacgccggaa gtacccgtgt
     1921 cacccttggc gccggctgac ccgggcgtcc cttgcgcgcc cggaggcccg gcggggccgg
     1981 tggcaccgac cgccccggcg ggaccctgcg gg
//
LOCUS       DATGJT010000524         6038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_479508, whole genome shotgun sequence.
ACCESSION   DATGJT010000524 DATGJT010000000
VERSION     DATGJT010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6038
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479508"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VKX24_08980"
     CDS             complement(<1..246)
                     /locus_tag="VKX24_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008417133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HLJ08658.1"
                     /translation="MFDNLGNRLDDIFKKLRSRGRLTEKDVDEAMREIRVALLEADVA
                     LPAVRAFLKKVKEEALGESVLKSLSPGQQVVKIVHEEL"
     gene            420..944
                     /locus_tag="VKX24_08985"
     CDS             420..944
                     /locus_tag="VKX24_08985"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HLJ08659.1"
                     /translation="METDADRSTADAVPEPRDLAFEPFFAASCQTVVGLVAAVTGDTR
                     LAEDATQEAYLRALRRWHRVRQLERPELWVARVASNLAIDRWRRQRRESGFDVEAPVD
                     PPDSVSRLWVEWGLAQLTPAQRQVVLLKDLEGYPVKEIAGRLARSPETVKSQLASGRR
                     RLRELLGDAGEEDR"
     gene            941..1732
                     /locus_tag="VKX24_08990"
     CDS             941..1732
                     /locus_tag="VKX24_08990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08660.1"
                     /translation="MSDHDERRLSGIGRELWPDPASAYRELLAARAHRRRRAAGLGGV
                     AAFTVAAAAVAILVLPGGHRAAARGIVVGGAPTPAPPTVTATTPTPSGGEGPGLATPA
                     PTPTNAQPGPDDVLAPAVGAIITATDTRGADSRFEPATVTITAGFAVRFVNSGTVPHA
                     ATAGDGTWRSPSLAPGQSATTPAFQTSGVFTYYLENQQAPQTLGMPTTIIVLPSPGLG
                     PPPLPEVAAVPPPRPTPAPTPSPQPAAPLPPLNAGKVVPSPGANP"
     gene            complement(1875..3245)
                     /gene="ftsY"
                     /locus_tag="VKX24_08995"
     CDS             complement(1875..3245)
                     /gene="ftsY"
                     /locus_tag="VKX24_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019969629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HLJ08661.1"
                     /translation="MSAVFPEVFIGASAVLAAATVGAGMLAGRRGSGGGTRAGERSGS
                     GKASPKHAGAPGETRPSTRRAQKVPGAPGAPGAPPAKPEVEAPPAAPPKAPPAKPPAG
                     KPAGVPPTAAAPAPAPPTPKAPPAPPAPAPAKPAPAAPAPAAPAAPAPGAPPEAPRER
                     VTTRLRRSLTKSRTAIGERLTAIVGRGRLDEEAWEDIEEALIRADVGVEATDVILESL
                     RRQRLKPAELEGALRQELVTILDRTDRSFRFADRSPSVWLVTGVNGTGKTTSIAKLAR
                     MLQDQGHSVVLAAADTFRAAAIDQLGTWAERLGVHMIRHAPGADPGAVVFDAVEYAEA
                     RKIDVVLVDTAGRLHTKSPLMEELKKIRRIAERKAQVTEALLVLDATVGQNGIAQART
                     FGEAVEITGVVLTKLDGSARGGIVVAVQEELGIPVKAVGVGEGMNDLELFDPVAFADA
                     LVGEGD"
     gene            complement(3349..>6038)
                     /locus_tag="VKX24_09000"
     CDS             complement(3349..>6038)
                     /locus_tag="VKX24_09000"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08662.1"
                     /translation="SLNRLTERLRALGRLARERERTLGAELAGITEAGAQARLDELRR
                     ALGAAEPLLAEAVATVGVAEQLAAERRQVLAAAQAALDEAQGRLAPLRAAQREAQAET
                     VKLRGELASATASLEAARREHERAVQRRGTIDTARAEAAAAFEEANAALVALEESADP
                     EMEALAELEDSIEALQHERQGALGALGDAEREAATWRARAQVRAGVSPQAVRSLAARG
                     IEGVLGVLADLVEVPAASKAALEALVGPASSVLVVADPAAAERVLEAAGGGEPLGLLI
                     AGGPARPGEGTPLVELVRPLAGAAQSALGGVYVAGGTAEAARLARERPEAVFVTLAGV
                     MATGPLLVQTSAAAGARAARAESELSGARDRLARVDADLKERRKAYEQKSAVLNRADA
                     EIAAAVDRASSAERELHALDRESGVLDEADQRGAVQAAGLATRVEELAAAAAAAEQRA
                     EVAGQALQGQADEQSVASRARSQAAAAADEARFELARATERRRLLAERCAELTSALEL
                     AAAQAAAVGGLRAELSGRMHRAAEVGETCSLFADGSARWTLDAEEVRRRVGSEVAEGE
                     RHLEELQTRRRAAAARLEALREKARAEDLSRAELRIRVRMAEAKLAEGDRPVETLVRR
                     FGRRLEDEDPGSLADPWDRSSATESEVLQRRLTKLERDLAAMGRVNPLAAAEFESLNE
                     REEFLTGQVADIKSSRRDLVKVVASVEERILELFGAAFSDVAREYEHVFSTLFPGGAG
                     RLRLTDPADPLETGVEVEARPGGKSLRRLSLLSGGERALAGLALAFAIFRARPSPFYV
                     LDEVEAALDDVNLHRFLQLLGDFRESSQLIVVTHQKRTMELADVLYGISVRSDGASRV
                     ISERLNAGPGSGRPRTGADRGVQPLPVERSAHTMPGGLG"
BASE COUNT          732 a         2345 c         2185 g          776 t
ORIGIN      
        1 cagctcttcg tggacgatct tgaccacctg ctgaccgggg gacagcgact tgagcaccga
       61 ctcaccgagg gcctcctcct tgaccttctt gaggaacgcc cggacggcgg gcagggccac
      121 gtcggcttcg aggagggcca cgcggatctc ccgcatcgcc tcgtcgacgt ccttctcggt
      181 caaccggccg cgggagcgga gcttcttgaa gatgtcgtcg aggcggttgc ccaggttgtc
      241 gaacatcgcg ccattgtacg gggcgccgcc gcgacccccg gcgggagcat atgagggccg
      301 cttgcggggc cgcatgggcg caggatgagg gcctggatgg aggccggatg ggggaaaatt
      361 ggtgatcctt cccccattcc gccgggccca ggcgtgttga ttgcatggag ggcacgctgg
      421 tggagacgga cgccgaccgg agcaccgccg atgcggtccc ggagccccgc gacctcgcct
      481 tcgaaccgtt cttcgccgcc agctgccaga cagtcgtcgg gctggtcgcc gccgtcaccg
      541 gcgacacccg gctcgccgag gacgccaccc aggaggccta cctgcgggcg ctccggcgct
      601 ggcaccgggt gcgccagctc gaacggcccg agctgtgggt cgcccgggtc gcgtcgaacc
      661 tggcgatcga ccggtggcgc cgccagcggc gggagtccgg cttcgacgtc gaggctccgg
      721 tcgacccgcc ggacagcgtc agcaggctct gggtggaatg gggcctcgcc cagctcaccc
      781 cggcgcagcg ccaggtcgtc ctgctgaagg acctggaggg ctacccggtc aaggagatcg
      841 ccgggcgact ggcgcgctcc ccggagacgg tgaaatcgca gctcgccagc ggccggcgcc
      901 ggttgcggga gctgctcggc gacgccggag aggaggatcg gtgagcgacc acgacgagcg
      961 gcgcctgtcc gggatcggcc gggagctctg gccggacccc gccagcgcct accgggagct
     1021 gctggccgcc cgtgcgcacc ggcgccggcg cgccgccggg ctgggcgggg tggcggcgtt
     1081 caccgtcgcc gcggcggcgg tcgccatcct ggtgctgccc ggaggtcacc gggcagcggc
     1141 gcggggcatc gtggtcggcg gcgctccgac gccggcgccg ccaaccgtta cggcgaccac
     1201 tccgacccca tctggcggtg aaggtcccgg gctggcgacg ccggcgccga cccccaccaa
     1261 cgcacagccc gggccggacg acgtgctggc tcccgcagtg ggggcgatca tcacggccac
     1321 cgacacccgc ggggccgact cccggttcga gcccgccacg gtgacgatca ccgccgggtt
     1381 cgcggttcgc ttcgtcaact ccggcacggt gccccacgcg gcgaccgccg gcgatgggac
     1441 gtggaggtcg ccaagcctgg cccccgggca gtccgccacc acgccggcct ttcaaacctc
     1501 gggcgtcttc acctactacc tggagaacca gcaggccccg cagaccctcg gcatgcccac
     1561 cacgatcatc gtcctgccat cccccgggct cggccccccg ccgctgcccg aggtcgcggc
     1621 cgtgccccca ccgaggccga ctccggcgcc gaccccatca ccgcaaccgg ccgcgccgct
     1681 gccgccactg aacgccggga aggtcgttcc gtcgccaggc gccaacccct gagcagcaac
     1741 ccgggcgggc cgggcgaacc ttgtaaatct cggtacggat tccggtactg aaacctacaa
     1801 ggaatggtcc gggccctccg ttggcgccgg ctggggcaac ccggtgatgc tggtccagca
     1861 gtaggccctg gccgtcagtc cccctcgccc accagggcgt cggcgaacgc caccgggtcg
     1921 aacagctcca ggtcgttcat cccctcgccg acaccgacgg ccttgaccgg gatgcccagc
     1981 tcctcctgca ccgccaccac gatgccgccg cgggccgagc cgtcgagctt ggtcaggacg
     2041 acgccggtga tctcgaccgc ctcgccgaag gtgcgcgcct gggcgatccc gttctggcca
     2101 acggtggcgt cgaggaccag cagcgcctcc gtgacctggg ccttccgctc ggcgatccgc
     2161 cggatcttct tcagctcttc cataagcggg gacttggtgt gcagccgccc ggcggtgtcg
     2221 accaggacga cgtcgatctt ccgggcctcg gcgtactcga cggcgtcgaa gaccaccgcc
     2281 cccgggtcgg cgcccggggc gtggcggatc atgtggacac cgaggcgctc ggcccaggtg
     2341 ccgagctgat cgatcgccgc cgcccggaag gtgtcggcgg ccgccaggac gacgctgtgg
     2401 ccctggtcct ggagcatccg tgcgagcttg gcgatgctcg tcgtcttgcc cgtcccgttg
     2461 acgccggtca cgagccacac gctcggggac cggtcggcga agcggaagct gcggtcggtg
     2521 cggtccagga tcgtcaccag ctcctggcgg agcgccccct ccagctcggc gggcttcagc
     2581 cgctggcggc ggagcgactc gaggatgacg tcggtcgctt cgacgccgac gtcggcgcgg
     2641 atcagggctt cctcgatgtc ctcccaggcc tcctcgtcga gccggccccg gccgacgatc
     2701 gcggtgagcc gctcgccgat cgcggtgcgg ctcttggtca ggctgcggcg gagccgggtg
     2761 gtgacccgtt cccggggagc ctccgggggt gcccccggtg cgggggccgc gggtgccgcc
     2821 ggtgcggggg cggcgggggc gggcttggcc ggcgccggtg ccggcggtgc cggcggagcc
     2881 ttgggagtcg ggggggccgg agcgggcgcg gcggcggtcg gcggaactcc ggccggcttg
     2941 ccggcgggtg gcttcgccgg gggggccttc ggaggcgccg ccgggggggc ctcgacctcg
     3001 ggtttggccg ggggtgcccc cggtgccccc ggcgcccctg ggaccttctg ggcgcggcgc
     3061 gtgcttgggc gggtctcgcc cggtgcgccc gcgtgcttgg gggaggcctt tcccgagccg
     3121 ctgcgctcgc cagcacgggt accgccgccg gaaccgcgcc tgccggcgag catcccggcg
     3181 ccgacggtcg ctgccgccag gacggcgctg gctccgatga acacctcggg gaagacggcg
     3241 ctcatcgccg cccgaccatc gcgttgtgca cttcagctct cctccgcgcg cgcatggggc
     3301 acatgggaca ccgaacggcc catgccgaca gccctacccg gtaccgcgtc agcccaagcc
     3361 gcccggcatg gtatgcgccg aacgctcgac cggtagcggc tgcacccctc gatcggcacc
     3421 ggttcggggc cttccgctcc ccggaccggc gttgagtcgc tccgagatta cccggctcgc
     3481 cccatcggag cgaaccgaga tgccgtagag gacgtcggcc agttccatcg tgcgcttctg
     3541 gtgggtgacc acgatcagct gcgaactctc ccggaagtcg cccagcagtt gaaggaagcg
     3601 gtgcaggttg acgtcgtcga gggccgcctc cacctcgtcg aggacgtaga acggcgacgg
     3661 ccgggcgcgg aagatggcga atgccaacgc caggccggcc agcgcccgct cgccgccgga
     3721 cagcagcgag agccggcgca ggctcttgcc gcccggccgg gcctcgacct cgaccccggt
     3781 ctccagcgga tccgccgggt cggtcagccg cagccggccg gcgccccccg ggaacagggt
     3841 ggagaagacg tgctcgtact cacgggcgac gtcgctgaag gcggcgccga acagttcgag
     3901 gatgcgctcc tcgaccgagg caaccacctt gaccagatcc cggcggctcg acttgatgtc
     3961 ggcgacctga ccggtcagga actcctcccg ttcgttcagc gactcgaact cggcagcggc
     4021 gagcgggttg acccgcccca tcgccgccag gtcccgctcg agcttggtca ggcggcgctg
     4081 caggacctcg gactcggtcg ccgagctgcg gtcccaggga tcggcgagcg acccgggatc
     4141 ctcgtcctcg agcctccggc cgaagcggcg gaccagggtc tcgaccgggc ggtcgccctc
     4201 ggcgagcttg gcctccgcca tgcgaacgcg gatgcgcagc tcggcccggg acagatcctc
     4261 ggcacgagcc ttctcgcgga gggcctcgag ccgggcggcc gccgcgcggc gccgggtctg
     4321 caactcctcc aggtggcgct cgccctcggc cacctcggag ccgacccggc ggcggacctc
     4381 ctcggcgtcg agggtccacc gggcgctgcc atcggcgaac agcgagcagg tctcgcccac
     4441 ctcggccgcc cggtgcatcc gcccggagag ttcggcccgg agaccgccga cggcggcggc
     4501 ctgcgccgcg gccagctcga gcgccgaggt cagctcggcg cagcgctcgg cgagcagccg
     4561 gcgccgctcg gtggcccggg ccagttcgaa gcgggcctcg tccgcagcgg ccgccgcctg
     4621 cgatcgggcc cgggaggcca cggactgctc gtccgcttgg ccctgcagag cctgcccggc
     4681 gacctccgcc cgctgctcgg ccgccgccgc ggccgcggcc aattcctcga cccgggtggc
     4741 caagcccgcc gcctgcaccg ccccccgctg gtcggcctca tcgaggactc cggactcccg
     4801 gtcgagcgcg tgcagctccc gctccgccga cgacgcccgg tcgacggcgg cggcgatctc
     4861 ggcgtccgcc cggttcagga cggccgactt ctgctcgtac gccttccggc gctccttcag
     4921 gtcggcatcg acccgggcca gccgatcccg cgccccggac agctcggatt ccgcccgggc
     4981 ggcccgggcg cccgccgccg ccgaggtctg tacgaggagc ggcccggtgg ccatcacgcc
     5041 ggccagggtg acgaagacgg cttcggggcg ctccctggcc agccgggccg cctcggccgt
     5101 ccccccggcg acgtagaccc cgccgagcgc cgactgggcg gcgccggcca gcggccggac
     5161 cagctcgacc agcggggtgc cctcgccggg gcgggcgggt ccgccggcga tcagcagccc
     5221 gagcggctca ccgccccccg ccgcctccag cacccgctcg gccgcggccg ggtcggccac
     5281 gaccaacacg ctgctcgccg gcccgaccag ggcctccagg gccgccttcg acgctgccgg
     5341 gacctcgacc aggtcggcaa ggaccccgag gactccctcg atgccccggg ccgccagcga
     5401 gcgcaccgcc tggggcgaca ccccggcccg gacctgcgcc cgcgcccgcc aggtggccgc
     5461 ctcccgctcg gcatcgccca gggcgccgag ggctccctgc cgctcgtgct gcaacgcctc
     5521 gatcgagtct tcgagctcgg cgagcgcctc catctccggg tcggcgctct cctcgagggc
     5581 caccagcgcg gcgttggcct cctcgaaggc ggcggcggcc tccgcccggg cggtgtcgat
     5641 cgtgccccgc cgctggaccg cccgctcgtg ctcccggcgc gccgcctcga gcgacgcggt
     5701 cgccgacgcc agctcgccgc gcagcttcac ggtctcggcc tgggcctccc gctgggcggc
     5761 ccgcagcggg gcgagcctgc cctgcgcctc gtcaagcgcg gcctgggccg ccgccaggac
     5821 ctgccgccgc tcggccgcca gctgctcggc gacgccgacg gttgccaccg cctcggcaag
     5881 caagggctcg gccgcgccca gcgcccggcg cagctcatcg agccgggcct gggcgccggc
     5941 ctcggtgatg ccggcgagct cggcccccag ggtgcgctcc cgctcccggg cgagccggcc
     6001 cagcgcccgc agccgctcgg tcagccggtt gagcgacc
//
LOCUS       DATGJT010000525         3400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1207006, whole genome shotgun sequence.
ACCESSION   DATGJT010000525 DATGJT010000000
VERSION     DATGJT010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3400
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1207006"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VKX24_09005"
     CDS             <1..204
                     /locus_tag="VKX24_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012347016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HLJ08663.1"
                     /translation="DVFEAEPAVHPRLLAAPGAVLLPHIGSATVATRTAMARLASASA
                     RAVLAGVLPPTALNPEAGSRPLQ"
     gene            270..431
                     /locus_tag="VKX24_09010"
     CDS             270..431
                     /locus_tag="VKX24_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011718926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08664.1"
                     /translation="MGLVLFLLILALVFGGVGLFVEGLKWALIIALALFIASFFTGTT
                     HYHRRGSAL"
     gene            complement(458..916)
                     /locus_tag="VKX24_09015"
     CDS             complement(458..916)
                     /locus_tag="VKX24_09015"
                     /inference="COORDINATES: protein motif:HMM:NF024102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BsuPI-related putative proteinase inhibitor"
                     /protein_id="HLJ08665.1"
                     /translation="MRRIAGVLLLVLVAPAALAGCHRGDRATTGGVVSYNDTFSFWVS
                     FDEPVRTGHPVTWVLNIENRSKNPVTLRFSSGKDGDLALQQGGREVYRWSANRVFSQA
                     LRQVHLAAGARHAFPLQDKALAAPAGDYELVAVMASDPSPGELRRPVTVR"
     gene            complement(921..3089)
                     /locus_tag="VKX24_09020"
     CDS             complement(921..3089)
                     /locus_tag="VKX24_09020"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HLJ08666.1"
                     /translation="MGEPAPEGGGGPRPAWADRLAAAEVELAALRSHVASLVEATGSI
                     VWVADTERGFVEPQPDWADYTGQTPAEYAGFGYMDAVHPDDRKALGAANRAAGRGEVV
                     WVAEARLWHAATGTYRHCVSRGAPLRDETGAVTGWVGVCTDIHEQVAAREDAEAVSAA
                     ARRAQRAAEEAQREAEEAAAAAEAANRRLRQLQEISDVAVSRLPLADLVAALRNRLQA
                     VLAVDTVRILLLDERTKLLRPAALEPDDPAGADFSLPLGRGFGGRVALAGGPVIEPDA
                     GAVERLDPLILAVRSLAGVPLLVGDRLVGVLHVGTRERRVFTRADVELLELAAERVAA
                     AMERSRAFERERTLARTLQAALLPPSLPAIPGVALSARYIAAGEGLDVGGDFYDVFAV
                     GDGAWLAVIGDVCGRGPEAAAMTGLARHTVRAVAGERVGPAEVLRRLNSALAAEAGDE
                     RFATAVCARLEPDPAGGRARLVLASGGHCRPILLRGDGTVEPVAVGGTLLGAFPDVRL
                     DEVSVDLGPGDSLVLYTDGVVEAQGIGGFFGEWRLLRLLASAAGRTGAEVAGLVEEAV
                     SSHAGGPPDDDLALMVLQVPSPLPPTPDVLVDTALPAGEAAAGEARRAVERALGGRLP
                     DDDLDAVRLVASELVTNAVRHGRPDTGGPRLRVLSGGSAVRVEVRNRGRAFALPTERA
                     ALLDESGRGLDVVRHLARAVGVDEEGPSVAVWALLELAVP"
     gene            3125..>3400
                     /locus_tag="VKX24_09025"
     CDS             3125..>3400
                     /locus_tag="VKX24_09025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08667.1"
                     /translation="MTDSVDFRDEGGIGWLVLRRPETRNAVDADFVWQAIEVLGNLPS
                     GLGALVVAGEGPAFCVGAELGGFHAALAAARADKDLAPLLRAMHTVTR"
BASE COUNT          423 a         1339 c         1238 g          400 t
ORIGIN      
        1 gacgtcttcg aggccgagcc cgccgtccac ccccgcctgc tggccgcacc cggcgccgtg
       61 ctgctccccc acatcggctc cgccaccgtg gccacccgca ccgccatggc ccggctggcg
      121 tcggcctccg cccgggcggt cctggccggc gtcctgccgc ccacggccct gaaccccgag
      181 gcaggttcgc gccctttgca gtgactaaac acgcgccgag gtcgggtaaa ggtcgggcac
      241 ctgatcaaac tggtcaagag gaggtcccga tggggctcgt actgttcctg ctgatcctgg
      301 cgctggtctt cggcggtgtc gggctgttcg tcgagggcct caagtgggcg ctgatcatcg
      361 ctctggccct gttcatcgcc agcttcttca ccggcacgac gcactaccac cggcgcggct
      421 ccgcactctg aagctcgaga tgagattgaa ggtcggacta gcggaccgtc accgggcggc
      481 gcagctcccc cggtgacgga tccgacgcca tgaccgccac cagttcgtag tcgccggccg
      541 gcgccgccag ggccttgtcc tgcaggggga aggcgtgccg ggcgccggcc gccaggtgca
      601 cctggcgcag cgcctggctg aacacccggt tggccgacca ccggtagacc tcccggccgc
      661 cctgctgcag ggcgaggtcg ccgtccttgc ccgacgagaa ccgcaacgtc acggggttct
      721 tcgaccggtt ttcgatgttc aggacccacg tcaccgggtg gccggtccgc accggctcgt
      781 cgaaggaaac ccagaaggag aacgtgtcgt tgtagctcac gacgccgccc gtcgtcgccc
      841 ggtcgccccg gtggcagccg gcgagggcgg cgggcgcgac cagcacgagc agcagaaccc
      901 cagcgattcg tcgcacacca ctacggtacc gccaactcca gcaacgccca gaccgccacg
      961 gacgggccct cctcgtccac cccgaccgcc cgggccaggt gccgcacgac gtcgaggccc
     1021 cggcccgact cgtcgaggag cgccgcccgc tcggtcggca gggcgaaggc ccgcccccgg
     1081 ttgcggactt cgaccctgac ggcggacccg cccgacagca cccgcaggcg cgggccgccg
     1141 gtatccgggc ggccgtggcg gacggcgttg gtcaccagct cactcgccac cagccggacg
     1201 gcgtcgaggt cgtcgtcggg gagccgcccg ccgagcgccc gctccaccgc ccgccgcgcc
     1261 tcgccggcgg cggcctcgcc cgccgggagc gccgtgtcga ccagcacgtc gggcgtgggc
     1321 ggcagcggcg acggcacctg gaggaccatc agcgccaggt cgtcgtccgg cgggccgccg
     1381 gcgtggctcg acaccgcctc ctcgaccagc ccggccacct cggcgcccgt ccggccggcg
     1441 gccgacgcca ggagccggag cagccgccat tcaccgaaga acccgccgat gccctgcgcc
     1501 tcgacgaccc cgtcggtgta gagcaccagc gagtcacccg gtccgaggtc gacggacacc
     1561 tcgtcgagcc gcacgtcggg gaaggcgccg aggagcgtgc caccgacggc caccggctcc
     1621 accgtgccgt ccccgcggag gaggatgggc cggcagtgac cccccgaggc cagcacgagc
     1681 cgggcccggc ctccggcggg gtcgggctcg aggcgggcgc acaccgcggt ggcgaagcgc
     1741 tcgtcgccgg cttcggcggc cagcgccgag ttgaggcggc gcagtacctc cgccgggccg
     1801 acccgctcgc cggccaccgc ccggacggtg tgccgggcga ggccggtcat ggccgccgcc
     1861 tcggggcccc ggccgcacac gtccccgatc accgccagcc aggcgccgtc gcccacggcg
     1921 aacacgtcgt agaagtcgcc accgacgtcg aggccttcgc cggcggcgat gtagcgggcc
     1981 gagagcgcca cgccggggat ggccggcagc gacggcggca gcagcgccgc ctggagcgtg
     2041 cgggccagcg tccgctcccg ctcgaacgcc cggctgcgct ccatcgctgc cgccacccgc
     2101 tccgcggcca gctccagcag ctccacgtcg gcccgggtga agacgcggcg ctccctggtc
     2161 cccacgtgga ggacgccgac gagccggtcg ccgacgagca gcggcacgcc ggccaggctg
     2221 cggacggcga ggatgagcgg gtcgagccgc tccaccgccc cggcgtcggg ttcgatgacc
     2281 ggtccgccgg ccagcgccac ccgtccgccg aagccccggc cgagcggcag cgagaagtcg
     2341 gcgccggcgg ggtcgtcggg ctcgagggcc gccggtcgga gcagcttggt gcgctcgtcg
     2401 agcagcagga tgcggacggt gtcgacggcc agcaccgcct ggaggcggtt ccggagggcg
     2461 gcgacgaggt cggccagcgg gaggcgggag acggccacgt cgctgatctc ctggagctgg
     2521 cgcagccgcc ggttggccgc ctcggcggcg gccgcggcct cctccgcctc ccgctgcgcc
     2581 tcctcggctg cccgctgcgc ccgccgggcg gcggcgctga cggcctcggc gtcctcccgg
     2641 gcggcgacct gttcgtggat gtcggtgcag acgccgaccc aaccggtgac cgccccggtc
     2701 tcgtcccgca gcggcgcccc ccggctgacg cagtgccggt aggtcccggt ggcggcgtgc
     2761 cacagccggg cctcggccac ccacaccact tcgccccggc cggccgcccg gttggcggcg
     2821 ccgagcgcct tgcggtcgtc ggggtgcacg gcgtccatgt agccgaaccc ggcgtactcg
     2881 gcgggggtct ggccggtgta gtcggcccag tccggctggg gctccacgaa gccccgctcg
     2941 gtgtcggcca cccagacgat cgagccggtg gcctcgacga gggaggccac gtggctccgc
     3001 aatgcggcca gctccacctc ggcggcggcc aggcggtccg cccaggcggg gcgcggccca
     3061 ccgccgccct ccggtgccgg ctcgcccatg gccggagtct acgagcgccg ctaccgtgcg
     3121 gcccatgacc gacagcgtgg atttcaggga cgagggcggt atcggctggc tcgtcctgcg
     3181 ccggccggag acccgcaacg ccgtcgacgc cgacttcgtg tggcaggcga tcgaggtcct
     3241 cggcaacctc cccagcgggc tcggggcgct ggtggtggcc ggcgaggggc cggccttctg
     3301 cgtcggcgcc gagctcggcg ggttccacgc cgcgctggcc gccgcccggg ccgacaagga
     3361 cctggcgccg ctgctgcggg ccatgcacac ggtcacccgc
//
LOCUS       DATGJT010000526         3200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1516903, whole genome shotgun sequence.
ACCESSION   DATGJT010000526 DATGJT010000000
VERSION     DATGJT010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516903"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VKX24_09030"
     CDS             complement(<1..360)
                     /locus_tag="VKX24_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018657958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HLJ08668.1"
                     /translation="MPDAVTLTDEDLPAFAADLGLPGIFDVHTHFMPERMQEAVWAHF
                     DALTDPPWPIRYRLDEDGRVAALARLGVVRFTALAYAHRPGVAAWLNEHTLGLAARVP
                     AVVPTFTLYPEPEAPEYV"
     gene            404..1294
                     /locus_tag="VKX24_09035"
     CDS             404..1294
                     /locus_tag="VKX24_09035"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HLJ08669.1"
                     /translation="MTAVTLTAAATKSVVIRHSLTIADWIEAGVVLVVGFVAATLLRR
                     ALQRRLHAEEFEHQAIVVVGRIARVLVAGAAFFYALSLLGIQLGPLIGAVGIGGIAVA
                     LAAQSMLADLIASILLQIRRPFRRGDQIATNDQEGRVEDVNFRTVIIRSYDGQRVFLP
                     ASKVLNGPIINYTVLGRRRTRLPIGLSYDADLEQAAARLLEAARTVDGVHSRPAPEVS
                     VTEFGESSVNVDVLYWHQPDQATTRRVRSAVAIAAKRALDEAGIDIPFPQRVLRFVEA
                     PPSASTEPASDGHHRLDSAS"
     gene            complement(1270..1836)
                     /locus_tag="VKX24_09040"
     CDS             complement(1270..1836)
                     /locus_tag="VKX24_09040"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HLJ08670.1"
                     /translation="MDRTRAAIVDAALALFSEQGFTETTVDAIAERADVGRRTFFRYF
                     PAKESVLFHDIDAQIQATIDALAARPHDEPPFLALVTVLRESAGRFGSDVDKRQLLAK
                     VAHECDNLLVHHRAVIMRRLEEEITAEVARRAGVPADDLSVGAAVAAILAAYGSAIRR
                     WILRGANEPLQPLVETALAAAQEALSSR"
     gene            1955..>3200
                     /locus_tag="VKX24_09045"
     CDS             1955..>3200
                     /locus_tag="VKX24_09045"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ08671.1"
                     /translation="MAPTTILQDTEAHPRRWVILGVLCTSLLLVMQGNTALNLALPKI
                     AESIGLSQSAMQWIVDAYSLVFAGLLFTTSTVGDRFGRKGVMQAGLVLFGLASGFAAF
                     GTHTASGLIAARAVMGLAGAMIMPSTLSILTNVFPASERAKAIAVWAGIAGGGAAVGM
                     ILNGFILEHFSWQSVFVLNLPLAFGALVAGFVLVPTSKDQSLAAHAAAVGGTPPVPPG
                     GGRIDLLGAVLSTAGVGSLVYGLIEAPAKGWVSASTLGWLAAGLVALGLFVAWQLRTD
                     EPMLDVRLFRKPAFGVSSLTLTLVFFALMGIFFSVSQLFQLVMRYGTFESALRSSPVF
                     LGLIIVAPQAPNVAKRIGTRRTVAGGLVLVATGIAILSFLSDTPNYLHVAAGMSVMAV
                     GMALAMSPTTGLLMSAVPRNRAG"
BASE COUNT          413 a         1201 c         1083 g          503 t
ORIGIN      
        1 cacgtactcc ggcgcctcgg gctccgggta gagcgtgaac gtggggacga ccgccgggac
       61 ccgggcggcg agcccgagcg tgtgctcgtt gagccaggcg gccacccccg gccggtgggc
      121 gtaggccagc gccgtgaagc ggacgacgcc cagccgggcc agggccgcca cccgcccgtc
      181 ctcgtcgagg cggtagcgga tcggccacgg cggatcggtc agggcgtcga aatgggccca
      241 cacggcctcc tgcatgcgct cgggcatgaa gtgggtgtgg acgtcgaaga tccccggcag
      301 gccgaggtcg gcggcgaagg cgggcaggtc ctcgtcggtc agcgtcacag cgtcgggcat
      361 cgccccatct tcgtattccg gccgctctgg gtaaggaacg tgcgtgaccg ctgtcacttt
      421 gaccgccgcg gcgacgaaga gcgtcgtcat caggcacagc ctgaccatcg ccgactggat
      481 cgaggccggc gtcgtcctcg tcgtcgggtt cgtcgccgcc acgctcctcc gccgggccct
      541 gcagcggcgg ctccacgccg aggagttcga gcaccaggcg atcgtcgtgg tcggccgcat
      601 cgcccgggtg ctggtggccg gggcggcgtt cttctacgcc ttgagcctgc tgggcatcca
      661 gctgggcccg ctgatcggcg ccgtcggcat cggcggcatc gccgtggccc tggccgccca
      721 gtcgatgctg gccgacctca tcgccagcat cctcctccag atccgccggc cgttccgccg
      781 gggcgaccag atcgccacca acgatcagga gggccgggtg gaggacgtca acttccgcac
      841 ggtcatcatt cgcagctacg acggccagcg ggtcttcctg ccggcgtcga aggtgctgaa
      901 cggcccgatc atcaactaca cggtcctcgg ccggcgtcgc acccggctcc cgatcggcct
      961 ctcctacgac gccgacctcg agcaggccgc cgcccgcctg ctggaggcgg cccggacggt
     1021 cgacggcgtc cacagccggc cggctcccga ggtcagcgtg acggagttcg gcgagtcgtc
     1081 ggtcaacgtc gacgtcctct actggcacca gccggaccag gcgaccaccc ggcgggtccg
     1141 cagcgccgtg gccatcgccg ccaagcgggc gctcgacgag gccggcatcg acatcccctt
     1201 cccgcagcgg gtgctccgct tcgtggaggc gccgccgtca gcatcgaccg agcccgcctc
     1261 cgacgggcat caccggctcg acagcgcctc ctgagcggcg gccagcgccg tctccaccag
     1321 cggctggagc ggctcattgg cgccccggag gatccagcgg cggatggccg agccgtaggc
     1381 ggccaggatc gccgccaccg ccgcccccac gctcaggtcg tcggccggga ccccggcccg
     1441 ccgggccacc tcggccgtga tctcctcttc cagccggcgc atgatcaccg cccggtggtg
     1501 gacgaggagg ttgtcgcatt cgtgggccac cttggccagc aactggcgct tgtcgacgtc
     1561 ggagccgaag cggccggccg actcccgcag cacggtgacc agcgccagga agggcggctc
     1621 gtcgtgcgga cgggcggcca gggcgtcgat ggtggcctgg atctgggcgt cgatgtcgtg
     1681 gaagagcacc gactccttgg ccgggaagta ccggaagaac gtgcgccggc cgacgtcggc
     1741 ccgctcggcg atggcgtcga cggtcgtctc cgtgaacccc tgttccgaga acagcgccag
     1801 ggcggcgtcg acgatcgccg ctcgggtgcg atccatgtgc cgctcgcgta gccctggcat
     1861 ctcggaatcc atcgtactcc gggcgggggg aatttctcga cagcgatgcc gcttggcact
     1921 aaagtcaagt gacactagtg ccgaaagaga tgccatggct cccaccacca tcctgcagga
     1981 caccgaagcc cacccccgcc gctgggtcat cctcggcgtc ctctgcacca gcctcctgct
     2041 ggtgatgcag ggcaacacgg ccctcaacct cgccctgccg aagatcgccg agagcatcgg
     2101 cctgtcgcag tcggccatgc agtggatcgt cgacgcctac tccctggtgt tcgccgggct
     2161 gctgttcacc accagcaccg tcggcgaccg cttcggccgc aagggcgtga tgcaggccgg
     2221 gctggtgctg ttcgggctgg ccagcggctt cgccgccttc gggacccaca ccgcctccgg
     2281 gctcatcgcc gcccgggccg tcatgggcct ggccggggcg atgatcatgc cctccacgct
     2341 gtcgatcctg accaacgtct tccccgcctc cgagcgggcc aaggccatcg ccgtgtgggc
     2401 cggcatcgcc ggcggcggcg ccgcggtggg catgatcctc aacggcttca tcctcgagca
     2461 cttctcctgg cagtcggtgt tcgtcctcaa cctcccgctg gccttcggcg ccctcgtggc
     2521 cggcttcgtc ctcgtgccca cctccaagga ccagtccttg gcggctcacg ccgccgctgt
     2581 cggggggaca ccccccgtcc ccccgggcgg cggccggatc gacctcctcg gcgccgtcct
     2641 ctcgacggcc ggcgtcggca gcctcgtcta cggcctcatc gaggccccgg ccaagggctg
     2701 ggtctcggcc tcaacgctcg gctggctggc cgccggcctc gtggccctcg gcctcttcgt
     2761 ggcctggcag ctgcggaccg acgagccgat gctcgacgtc cgcctgttcc gcaagccggc
     2821 cttcggcgtg tcgtcgctga cgctgacgct ggtgttcttc gccctgatgg ggatcttctt
     2881 ctccgtgagc cagctgttcc agctggtgat gcgctacggc accttcgagt cggcgctgcg
     2941 cagctcgccc gtcttcctcg gtctgatcat cgtcgccccc caggcgccca acgtcgccaa
     3001 gcggatcggc acccgccgca cggtggccgg cggcctggtg ctcgtcgcca ccgggatcgc
     3061 catcctgtcg ttcctctccg acacgccgaa ctacctccac gtcgccgccg gcatgtcggt
     3121 gatggcggtg ggcatggcgc tggccatgtc gccgacgacc ggtctgctga tgtcggccgt
     3181 tccccgcaac cgggccggca
//
LOCUS       DATGJT010000527         4053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_173099, whole genome shotgun sequence.
ACCESSION   DATGJT010000527 DATGJT010000000
VERSION     DATGJT010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173099"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VKX24_09050"
     CDS             complement(<1..400)
                     /locus_tag="VKX24_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011297799.1"
                     /note="has catalase and peroxidase activities; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase-peroxidase"
                     /protein_id="HLJ08672.1"
                     /translation="MPDKEPTQSVSESENPVIPSPEPKAHRPRTNKDWWPNQVDLSVL
                     HANSPLSNPMGPDYDYAEELKGLDFDALKRDIIEVLTTSQDWWPADWGHYGPLMIRMT
                     WHAAGTYRIEDGRGGAGTGQQRFAPLNSWPD"
     gene            complement(440..862)
                     /locus_tag="VKX24_09055"
     CDS             complement(440..862)
                     /locus_tag="VKX24_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017838364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HLJ08673.1"
                     /translation="MEGTEEKAALLRRHGLQVTAQRLAVLRALSDRPHSTADDIYQVV
                     RAEIGAISRQAVYDTFGVLTDKGLVRRIQPAGSPARYENRVGDNHHHLICRVCGRMVD
                     VDCAVGETPCLTAADDSGYEIDEAEVTYWGRCPECLDQ"
     gene            1060..1833
                     /locus_tag="VKX24_09060"
     CDS             1060..1833
                     /locus_tag="VKX24_09060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08674.1"
                     /translation="MRRTLSVLAAAALVVGLATPALAASRNPTKAPARTPATANTHHG
                     DSGRHMTGSSGHDRDGRRDFSRHDHDRFFHRFPFFYGSPYDYCPAYAYSPYPYGSYSD
                     CFSYSAPYGAPYGYGSDPSYDGGSAPAPPATAMPGTMPAPDSGAAPAPDTNPAPDSNA
                     APPPDTNPAPDSNAAPAPDSNAAAAPAPAPAPAPGNGAAPGDSMAPGPDGHAAPPPDG
                     HASPPPSATRGPAPDYAASAQAGQATAPAGPAGPPQPAT"
     gene            complement(1906..2292)
                     /locus_tag="VKX24_09065"
     CDS             complement(1906..2292)
                     /locus_tag="VKX24_09065"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLJ08675.1"
                     /translation="MSGPPIEVVLLRQVAGYLATPLFLVDEEGNLDYYNEPAEALLGH
                     RYEETGQMPLEEWARLWVATDAGGHILAPEERPLAVAIRERKPVQDDFFMRGSDGVVR
                     RLMVTAIPLEASDGTHLGAVAIFWET"
     gene            complement(2289..3146)
                     /locus_tag="VKX24_09070"
     CDS             complement(2289..3146)
                     /locus_tag="VKX24_09070"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ08676.1"
                     /translation="MQVTFWGTRGSLPSPRPGTTRYGGNTSCVSLRLSDGSAVVLDAG
                     TGIHRLADFGPDTTRVDVLLSHLHMDHIIGLGFFGALFQPDLEVHLWGPPSATLDLRA
                     RLSRYLSPPLFPVRLRDLPCKLELHGAPRGTFDLPGAAVTADLVCHPGPTLGYRLEAD
                     GAVLAYIPDHEPALADDGFPGRPDWISGFALMAGADLLIHDAQYSDEEYPAHVGWGHS
                     TISQAMALAEAAEVATLAAFHHDPNHNDNQLDRLFAAADEKRDWSFRLSPACEGVTVL
                     LGRQGAWRR"
     gene            complement(3151..3549)
                     /locus_tag="VKX24_09075"
     CDS             complement(3151..3549)
                     /locus_tag="VKX24_09075"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLJ08677.1"
                     /translation="MDHKPIELILLRQLASRLPLPVALADAEGNLVYFNPATERLLGF
                     EQATLGEYPIGRFDELLDPRHPDGTPMKAQDMTIAVALHGRRPQQGRMILHGADGRPH
                     EVVSTAVPLDGQGGTLLGSMSIFWEPRAGA"
     gene            3775..>4053
                     /locus_tag="VKX24_09080"
     CDS             3775..>4053
                     /locus_tag="VKX24_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HLJ08678.1"
                     /translation="MLGRTLPASAVAELAASFAGRLVQPGDADYDQHRAVFNGMIDRR
                     PALIARCTGDADVVAVVNFARSQELLVAVRAGGHSVPGYGVCDGGIVID"
BASE COUNT          557 a         1449 c         1452 g          595 t
ORIGIN      
        1 tgtccggcca gctgttgagc ggggcgaagc gctgctgccc ggtgccggcc ccgccccggc
       61 cgtcttcgat gcggtacgta ccggcggcgt gccacgtcat gcggatcatg agcggcccgt
      121 agtggcccca gtcggccggc caccagtcct gcgacgtcgt cagtacctcg atgatgtccc
      181 gcttcagcgc gtcgaagtcg agacccttga gctcctcggc gtagtcgtag tccggcccca
      241 tcgggttcga caggggcgag ttggcgtgga gaaccgacag gtcgacctgg ttcggccacc
      301 agtccttgtt cgtcctgggc cgatgtgcct ttggttcggg ggaggggatg accgggtttt
      361 cgctttcgct cacgctctgc gtgggttcct tgtcaggcac ttcggtgctt ctcctgtctc
      421 gctggttcgt gctgatgtct cattgatcca gacactcggg gcatcggccc cagtaggtga
      481 cctcggcttc gtcgatctcg tagccggagt cgtcggccgc ggtcaggcag ggcgtctcgc
      541 cgaccgcgca gtcgacgtcg accatccggc cgcagacccg gcagatgagg tggtggtggt
      601 tgtccccgac gcggttctca tagcgggccg gcgacccggc gggctggatc cggcggacga
      661 ggcccttgtc ggtgaggacg ccgaaggtgt cgtacaccgc ctgccgggag atcgccccga
      721 tctcggcccg cacgacctgg tagatgtcgt cggcggtact gtgcggccgg tcggagagcg
      781 cccgcagcac ggccagacgc tgggccgtga cctgcagacc gtgccggcgg agaagggcgg
      841 ccttctcctc ggttccctcc acgggcgggg acgctagcgc tgatcatcga cgccgtccaa
      901 tttttgatcg ataccaaatc cagtgaatcg ctcgcggttg tccgggcggc ggtgcggcgg
      961 gtttgtcagt atttcagcaa attgttgcct aaccgacagg tttgtgggga atgaggtcgg
     1021 tgagcctccg gccgtcggcc ggaggaagga ggcatacgta tgcgtcgaac actctccgtc
     1081 ctcgcggcgg cggcgctcgt cgtcgggctg gccaccccgg ccctggcggc gagccggaat
     1141 ccgacgaagg cgccggcccg gacgccggcg acggccaaca ctcatcacgg cgactccggc
     1201 cggcacatga ccggctcgtc aggacatgac cgcgatggcc gccgggactt ctcccgccac
     1261 gatcacgacc ggttcttcca ccggttcccg ttcttctacg gctctcccta cgactactgc
     1321 ccggcgtacg cctacagccc gtatccctac ggttcctatt cggactgctt ctcctactcc
     1381 gcgccctacg gcgctccgta cggctacggc tccgatccct cgtacgacgg cggctcggcg
     1441 cctgcgccgc cggccaccgc catgcccggg acgatgccgg ctccggactc cggcgctgct
     1501 cctgcccccg acaccaaccc cgcccccgac tccaacgccg cgccccctcc cgacaccaac
     1561 cccgctcccg actccaacgc cgcgcccgct cccgactcca acgccgccgc ggctccggca
     1621 cccgcccctg cgcccgctcc cggcaacggc gcagcccccg gcgacagcat ggcgcctggc
     1681 ccggacggcc acgccgcgcc gccgcccgac ggccacgcct cgccgccgcc gagcgccacc
     1741 cggggccccg cccccgatta cgccgcctcg gcgcaggcag gccaggcgac cgccccggcc
     1801 ggtcccgccg gcccgcccca gcccgccacc tgaacggacg aacccagtcc ctgtcgccca
     1861 gaatccctgt cgccgagcac ggaggggccg gaaccggccc ctccgtcacg tctcccagaa
     1921 gatggcgacg gcgccgaggt gcgtcccgtc ggacgcctcg agcgggatgg ccgtgaccat
     1981 gagccggcgt acgacgccgt cggagccccg catgaagaag tcgtcctgga cgggcttgcg
     2041 ctcccggatg gcgacggcca atggccgctc ctcgggggcg aggatgtgcc cgccggcatc
     2101 ggtggccacc cagagccggg cccactcctc gagcggcatc tgtcccgtct cctcgtaccg
     2161 gtgcccgagc agcgcctcgg ccggttcgtt gtaatagtcg aggtttcctt cctcgtcgac
     2221 gaggaacagc ggcgtggcca gatagccggc cacctggcgg agcagcacga cctcgatcgg
     2281 cggcccgctc accgccgcca tgctccctgc cgtccgagca ggaccgtgac gccctcacag
     2341 gcgggcgaga gccggaacga ccagtcccgc ttctcgtcgg cggcggcgaa gaggcggtcg
     2401 agctggttgt cgttgtggtt cgggtcgtgg tggaaggcgg ccagcgtggc gacctcggcc
     2461 gcctcggcca gcgccatcgc ctgggagatc gtgctgtggc cccagccgac gtgggccggg
     2521 tactcctcgt cgctgtactg ggcgtcgtgg atcaggaggt cggcgcccgc catcagcgca
     2581 aagccggaga tccagtccgg ccggccgggg aagccgtcgt cggccaacgc cggctcgtgg
     2641 tcggggatgt aggcgaggac ggcgccgtcg gcctccagcc gatagcccag ggtcggcccc
     2701 gggtggcaca cgaggtcggc ggtcacggcg gcgccgggga ggtcgaaggt cccccggggc
     2761 gcgccgtgga gctcgagctt gcagggcagg tcccgcagcc ggacggggaa cagcggcggg
     2821 gacaggtaac gggagagccg ggcgcggagg tcgagggtcg ccgacggcgg gccccacaga
     2881 tggacctcga ggtcgggctg gaacagggcg ccgaagaagc cgagaccgat gatgtggtcc
     2941 atgtgcagat ggctgagcag gacgtcgacc cgggtcgtgt cgggcccgaa gtcggccagc
     3001 cgatggatgc cggtgccggc gtcgaggacg acggccgagc cgtcggacag ccgcagcgac
     3061 acgcacgagg tgttcccgcc gtagcgggtc gtgcccggcc ggggactggg cagcgatccc
     3121 cgggtgcccc agaacgtcac ctgcaccgga tcacgcgccc gctcggggtt cccagaagat
     3181 cgacatcgac cccagcaacg tgccgccctg cccgtcgagg ggcacggcgg tgctcacgac
     3241 ctcgtggggc cgcccgtcgg cgccgtggag gatcatccgt ccctgctgcg ggcggcggcc
     3301 gtggagggcc acggcgatgg tcatgtcctg cgccttcatg ggcgtaccgt cggggtggcg
     3361 ggggtcgagg agctcgtcga accggccgat cgggtactcg cccagggtcg cctgctcgaa
     3421 cccgagcagg cgctccgtgg ccgggttgaa gtacacgaga ttcccctcgg catcggcgag
     3481 ggcgacgggc aggggcagcc ggctggcgag ctggcggagc aggatcaact cgatcggctt
     3541 gtgatccacc gaacggacgg tagccaagaa tccggcgccg cgacggcccg cggtgacgcg
     3601 ccgaaccccg gccggttact cctggggagg gtcaggccgg ggctcgaacg tctgcggcgg
     3661 accggcgatc ggccgatcgg cggaggtacg ttgcgcccgg ccgaggtagc ttgcccccga
     3721 cccgggccgt gggagggcga gatgacagac gagatgccga cgacgtcggg ctcgatgctc
     3781 gggaggaccc ttccggcgtc ggcggtggcc gaactggcgg cgagcttcgc cggccggctg
     3841 gtccagcccg gcgacgccga ctacgaccag caccgggcgg tcttcaacgg gatgatcgac
     3901 cggcgtccgg cgctgatcgc ccgctgcacc ggcgacgccg acgtcgtggc ggtggtgaat
     3961 ttcgcccgga gccaggagct gctggtggcg gtgcgggccg ggggccactc cgtccccggc
     4021 tacggcgtct gcgacggcgg catcgtgatc gac
//
LOCUS       DATGJT010000528         2146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_899727, whole genome shotgun sequence.
ACCESSION   DATGJT010000528 DATGJT010000000
VERSION     DATGJT010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_899727"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VKX24_09085"
     CDS             <1..748
                     /locus_tag="VKX24_09085"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HLJ08679.1"
                     /translation="RRDQIVKGVSEQDYDAYTALVETQEKLARDEVALRAARDRARKR
                     SADTDVAVAAVAQLKKDQEAAKAVLDQRIADLTSEADALAAEQSQLEDLLRQRQAALE
                     AARRARAAAGDALERLPRVGAGVSPSGFIWPLDGFVTSGFGPRWGRMHTGIDIAAPAG
                     TPIHAAKAGEVIYAGWINGYGNTVIVDHGDGVATLYGHQSRLGSAEGQQLNQGDVLGF
                     VGSTGHSTGNHCHFEIRIDTKPVNPRPYLP"
     gene            794..1840
                     /locus_tag="VKX24_09090"
     CDS             794..1840
                     /locus_tag="VKX24_09090"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF014634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HLJ08680.1"
                     /translation="MAVALVCPDKFRGTLTAAAAAEALARGLEAVEVDRRRFDDVRRL
                     PLADGGEGTLDALLASQGGSLRRATVTGPLGQPVEAEWGLLPDGTAVVESARASGLAL
                     VDGPNDPLAATSRGTGELIRAAVRGGARRIVVAVGGSAMTDGGLGAVDALGWSLKGLD
                     VTVACDVTTPFLDAARVFGPQKGATAAQVALLGRRLERLAGVYRQRTGVDVAVLEHGG
                     AAGGLAGGLAALGARLEPGFEVVARAAGFEAALDGVDVVVTGEGRFDRTSLEGKVTGE
                     SLAWAAAEGVPHRAVVAGQVADDLKSDPGLEGVLVLSLVDRIWQAGEAWARAGLLAEE
                     AGVEVGRWALERLG"
     gene            complement(1932..>2146)
                     /locus_tag="VKX24_09095"
     CDS             complement(1932..>2146)
                     /locus_tag="VKX24_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003066870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5,6-dimethylbenzimidazole synthase"
                     /protein_id="HLJ08681.1"
                     /translation="SFYREGFVSELLGIPDGVRPVAWLCVGPVSHLEETPDLERHGWR
                     QRRPLSEALHHEHWTAKAASREPTDS"
BASE COUNT          257 a          754 c          885 g          250 t
ORIGIN      
        1 acggcgggac cagatcgtga agggcgtctc cgaacaggac tacgacgcct acacggccct
       61 ggtcgagacg caggagaagc tggcccggga cgaagtcgcc ctccgggccg cccgggaccg
      121 ggcccggaag cggtccgccg acaccgacgt ggccgtggcc gccgtcgccc agctgaagaa
      181 ggaccaggag gcggccaagg cggtgctcga ccagcggatc gccgacctca cgtcggaggc
      241 cgacgccctg gccgccgagc agagccagct cgaagacctc ctccgccagc gccaggcggc
      301 cctcgaggcg gcccggcggg cccgggcggc ggccggcgac gccctcgagc ggctgccccg
      361 ggtcggggcc ggcgtgtcgc ccagcgggtt catctggccc ctcgacggct tcgtgacctc
      421 gggcttcggg ccccggtggg gccgcatgca caccggcatc gacatcgccg ccccggccgg
      481 cacgccgatc cacgccgcca aggccgggga ggtcatctac gccgggtgga tcaacggcta
      541 cggcaacacg gtgatcgtcg accacggcga cggcgtggcc acgctctacg gccaccagtc
      601 ccggctgggg tcggccgagg gccagcagct gaaccagggc gacgtcctcg gcttcgtggg
      661 cagcaccggg cactcgaccg ggaaccactg ccacttcgag atccggatcg acacgaagcc
      721 ggtcaacccg cgcccgtacc tcccctgagg ccgtatcggc cctcagagcg gccggcgtag
      781 caagctctgg gccttggccg tcgccctcgt ctgcccggac aagttccggg gcacgctgac
      841 cgccgccgcg gcggcggagg cgctggcccg cggcctggag gcggtcgagg tggaccgccg
      901 gcgcttcgac gacgtccgcc gcctgccgct ggccgacggg ggcgagggta cgctcgatgc
      961 cctgctggcg tcgcagggcg ggtcactccg ccgggccacg gtcaccggcc cgctgggtca
     1021 accggtggag gccgagtggg ggctcctgcc cgacgggacg gcggtggtcg agtcggcccg
     1081 ggccagcggc ctggcgctgg tcgacgggcc gaacgacccg ctggccgcca ccagccgggg
     1141 gaccggcgag ctgatccggg cggccgtccg gggcggggcc cgccgcatcg tggtggcggt
     1201 cggcgggtcg gccatgaccg acggcggtct cggggcggtc gacgccctcg ggtggtcgct
     1261 caagggcctc gacgtcacgg tggcctgcga cgtgacgacg ccgttcctcg acgccgcccg
     1321 ggtcttcggc ccgcagaagg gggccacggc ggcccaggtc gccctgctcg ggcggcggct
     1381 ggagcggctg gccggcgtct accggcagcg gacgggcgtc gacgtcgccg tcctggagca
     1441 cggcggcgct gccgggggcc tggccggagg cctggcggcg ctgggcgccc ggctggagcc
     1501 ggggttcgag gtggtcgccc gggcggcggg attcgaggcg gcgctggacg gggtggacgt
     1561 cgtggtcacc ggggagggcc gcttcgaccg gacgagcctg gagggcaagg tgaccggcga
     1621 gtccctcgcc tgggcggcgg cggaaggggt gccccaccgg gcggtggtgg ccggccaggt
     1681 cgccgacgat ctgaagtccg acccggggct ggagggcgtg ctggtgctgt cgctcgtcga
     1741 ccgcatctgg caggccgggg aggcgtgggc ccgggcgggg ctgctggccg aggaggcggg
     1801 ggtggaggtg ggccgctggg cgctggagcg cctggggtga ggctgtcgac cgtggggcgc
     1861 gaccggtggc ggtcggcccg atatcgacgg ccgtcgacgc ttccggggcg cgaccggtcg
     1921 cgccccccgg gtcaggagtc ggtcggctcc cgggaggcgg ccttggcggt ccagtgctcg
     1981 tggtggagcg cctcggacag gggacggcgc tgccgccagc cgtgccgttc caggtcgggg
     2041 gtctcctcca ggtggctgac gggcccgacg cagagccagg ccaccgggcg gacgccgtcg
     2101 gggatgccga gcagttcgga gacgaagccc tcccggtaga acgaca
//
LOCUS       DATGJT010000529         3569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1314267, whole genome shotgun sequence.
ACCESSION   DATGJT010000529 DATGJT010000000
VERSION     DATGJT010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3569
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1314267"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="VKX24_09100"
     CDS             complement(<1..539)
                     /locus_tag="VKX24_09100"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLJ08682.1"
                     /translation="MESRSVRERVLEGALLCIGRYGLARTTVDDVAAASGVSRATIYR
                     HFPGGREQIVTDTVGWEMGRFFLRLGEAVAGASDLSSLLEHGLAFARRALEEHAVFQR
                     VVDTEPDRLLPLLTVESFRILPLIGGFLVPYLERECDAGRLRPGADIGRTADYLARMV
                     LSCIGAAGVYDLDDPDEIRL"
     gene            570..1637
                     /locus_tag="VKX24_09105"
     CDS             570..1637
                     /locus_tag="VKX24_09105"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014350888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HLJ08683.1"
                     /translation="MDLPVMPPVSPMLAKLSRELPAGGGLLYEPKWDGFRCIVFRDGD
                     EVELGSRNERPLTRYFPELLDPLREQLPARCVLDGEVVIATAGGLDFEALLQRIHPAA
                     TRINLLAKETPASFVAFDLLSEGDEDLRPSPQAERRRRLEAMLRHARPPLHLTPCTTD
                     RAVAAEWFDAFEGAGLDGVVAKPEQLPYREGERVMLKVKHERTADCVVAGFRWHKSGG
                     VIGSLLLGLYDDAGTLHHVGVTASFPMAQRKALVETLAPYREGALENHPWRDWASAMA
                     AAGGRMPGAQSRWNAGKDQSWEPLRPELVVEVRYDHLQGDRFRHGTTFVRFRDDRAPQ
                     SCTYAQLDEAAPAELAQIFGT"
     gene            complement(1639..2463)
                     /gene="dapB"
                     /locus_tag="VKX24_09110"
     CDS             complement(1639..2463)
                     /gene="dapB"
                     /locus_tag="VKX24_09110"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018805068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HLJ08684.1"
                     /translation="MADSDTTRDPIRVAVLGAAGRMGATVCRAVLDAPDMELVAVVDP
                     PHEGRPLDDFGVAGTGLTLQMLGPSVKAAQPSVAVDFTHVEAARGNLRWCGLNGVHAV
                     VGTTGLTSADFADLAGLFNGERANAVVAPNFAIGAVLMMQLAAIAAPWFESAEIIELH
                     HDNKVDAPSGTALLTAERIAETSTEWTPDPTKTVAVDGARGGEGPAGIRIHSVRLRGL
                     VAHQEVLLGTTGQSLTIRHDSYDRTSFMPGVLLAVREVANRPGVTVGLDTLLGFGS"
     gene            complement(2456..>3569)
                     /locus_tag="VKX24_09115"
     CDS             complement(2456..>3569)
                     /locus_tag="VKX24_09115"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLJ08685.1"
                     /translation="GTETRSAQAIAEDVEAVGGEMNAFTTKEYTAYYVRLLDESLDLA
                     LDILSEVVWAPAFRPDEVDCERQVILEEIRMHEDTPDELVHSVFSEALFPGEAVGREV
                     LGQRDAIVAMTRDEIARFHAEHYRVENLVVAAAGNVDHDRMVEAIAARCTGGPGDRPP
                     RPEAEIRPAGAVRVLHRPTEQAHLVLGMPALSRSDPDRWALSVLNHVIGGGMSSRLFQ
                     EVREKRGLAYSVYSYRSALEDTGTFAVYAGTAPERAPEVLSIIGAELDRLGAERCLAP
                     GELERAKGHFKGQMALGLESSSARMERIGRSEVTTGEIQSVDGMVAAIDAVTPDDVAR
                     VIDRVLGAGPRVLAAVGPVDGDDLAARLSVGSTSHG"
BASE COUNT          483 a         1297 c         1319 g          470 t
ORIGIN      
        1 agccggatct cgtcggggtc gtcgaggtcg tagacgccgg cggccccgat gcacgacagc
       61 accatgcggg ccaggtagtc ggcggtgcgg ccgatgtcgg ccccggggcg gagccggccg
      121 gcgtcgcatt cccgctcgag gtacgggacg aggaacccgc cgatcagcgg caggatccgg
      181 aaggactcca cggtgaggag cgggagcagc cggtcgggct cggtgtccac cacccgctgg
      241 aagacggcgt gctcctcgag cgcccggcgg gcgaaggcga ggccgtgctc gagcagcgac
      301 gagaggtcgg acgcaccggc caccgcctcg ccgagccgca ggaagaagcg gcccatctcc
      361 cagccgacgg tgtcggtcac gatctgctcc cggccgccgg gaaagtggcg gtagatcgtg
      421 gcccgggaga cgcccgacgc ggcggcgacg tcgtcgacgg tggtgcgggc gaggccgtag
      481 cggccgatgc acagcagcgc tccttcgagg acgcgctcgc ggaccgaccg gctctccatc
      541 gattccaagg gtagggcaga cttccggccg tggacctgcc ggtgatgccc cccgtctccc
      601 ccatgctggc caagctctcc cgggagctcc cggccggcgg cggcctgctc tacgagccga
      661 agtgggacgg gttccgctgc atcgtcttcc gcgacggcga cgaggtcgag ctcggcagcc
      721 gcaacgagcg cccgctcacc cgctacttcc ccgagctgct cgaccccctg cgggagcagc
      781 tgccggcgcg ctgcgtgctc gacggcgagg tggtgatcgc caccgccggc gggctcgact
      841 tcgaggcgtt gctgcagcgc atccacccgg cggcgacgcg gatcaacctg ctggccaagg
      901 agacgccggc gtcgttcgtg gccttcgatc tcctctccga aggcgacgag gacctgcgcc
      961 cctcgcccca ggccgagcgt cggcgacggc tcgaggcgat gctgcgccac gcccgtccgc
     1021 cgctgcatct cacgccctgc accaccgacc gggcggtggc cgccgagtgg ttcgacgcct
     1081 tcgagggcgc cgggctcgac ggcgtggtgg ccaagcccga gcagctcccc taccgggagg
     1141 gcgagcgggt gatgctcaag gtgaagcacg agcggacggc cgactgcgtc gtcgccggct
     1201 tccgctggca caagagcggc ggggtgatcg gttcgctgct gctcggcctc tacgacgacg
     1261 ccggcacgct ccaccacgtc ggcgtcacgg cgtccttccc gatggcgcag cgcaaggcgc
     1321 tggtggagac gctggcgccg taccgggaag gtgccctgga gaaccatccc tggcgggact
     1381 gggcctccgc catggccgct gccggcgggc ggatgcccgg ggcccagagc cgctggaacg
     1441 ccggcaagga ccagtcgtgg gagccgctcc ggcccgagct ggtcgtcgag gtccgctacg
     1501 accacctgca gggcgaccgg ttccggcacg gcacgacctt tgtccgcttc cgcgacgacc
     1561 gcgcgccgca gtcctgcacc tacgcccagc tcgacgaggc cgcccccgcc gagctggccc
     1621 agatcttcgg gacctgagct aggagccgaa cccgagcagc gtgtcgaggc cgacggtcac
     1681 cccgggccgg ttggccacct cccggacggc cagcagcacg ccgggcatga acgacgtccg
     1741 gtcataggag tcgtgccgga tggtgagcga ctgcccggtg gtgccgagca gcacctcctg
     1801 atgcgccacc agccctcgca gccgcacgga gtggatgcgg atcccggccg ggccctcccc
     1861 gccccgggcg ccgtccaccg ccacggtctt ggtcgggtcc ggcgtccact cggtcgacgt
     1921 ctcggcgatg cgctcggccg tgagcagggc ggtgcccgac ggggcgtcga ccttgttgtc
     1981 gtggtgcagc tcgatgatct cggccgactc gaaccacgga gcggcgatgg ccgccagctg
     2041 catcatgagg acggcgccga tggcgaagtt cggcgccacc acggcgttgg cccgctcccc
     2101 gttgaacagc ccggcgaggt cggcgaagtc ggcgctggtg agcccggtcg tgccgaccac
     2161 ggcgtggacg ccgttgagcc cgcaccaccg caggttgccc cgggccgcct cgacgtgggt
     2221 gaagtcgacc gccaccgagg gctgcgccgc tttgaccgac gggccgagca tctggagggt
     2281 gagcccggtg ccggccacgc cgaagtcgtc gagcgggcga ccctcgtggg gcgggtcgac
     2341 caccgctacc agctccatgt cgggggcgtc gagcaccgcc cggcacaccg tggcccccat
     2401 gcggccggcg gcgccgagga cggcgaccct gatcggatcc cgggtcgtgt cggagtcagc
     2461 catgggaagt agaccctacc gagagccggg cggcgaggtc gtcgccgtcg accgggccga
     2521 cggcggccag cacccggggc ccggcgccga gcacccggtc gatgacccgg gccacgtcgt
     2581 cgggcgtgac ggcgtcgatg gccgccacca tgccgtcgac gctctggatc tcgccggtcg
     2641 tcacctcgga gcggccgatg cgctccatgc gggccgagct gctctcgagc ccgagcgcca
     2701 tctgcccctt gaagtggccc ttggcccgct cgagctcgcc cggcgccagg caccgctcgg
     2761 cgccgagccg gtcgagctcg gcgccgatga tcgagagcac ctcgggggcc cgctcgggag
     2821 cggtgccggc gtagacggcg aaggtgccgg tgtcctccag ggccgagcgg taggagtaga
     2881 cggagtaggc cagcccccgc ttctcccgta cctcctggaa caggcgggac gacatgccgc
     2941 cgccgatgac gtggttgagg accgacagcg cccaccggtc gggatcggag cgcgacagcg
     3001 ccggcatgcc gagcacgagg tgggcctgct ccgtcgggcg gtgcagcacc cgcaccgccc
     3061 ccgccgggcg gatctccgcc tccggccggg gcgggcggtc gccgggcccg ccggtgcagc
     3121 gggcggcgat cgcctccacc atccggtcgt ggtcgacgtt gccggcggcg gcgaccacca
     3181 ggttctccac ccggtagtgc tcggcgtgga agcgggcgat ctcgtcccgg gtcatggcca
     3241 cgatggcgtc gcgctggccg agcacctccc ggcccacggc ctcgccgggg aacagcgcct
     3301 cgctgaacac cgagtggacg agctcgtcgg gagtgtcctc gtgcatccgg atctcttcga
     3361 ggatcacctg ccgctcgcag tcgacctcgt cggggcggaa ggccggcgcc cacacgacct
     3421 cggagaggat gtcgagcgcc aggtcgaggc tctcgtcgag gagccggacg tagtaggcgg
     3481 tgtactcctt ggtggtgaag gcgttcatct cgccgccgac ggcctcgacg tcctcggcga
     3541 tggcctgggc gctgcgggtc tcggtgccc
//
LOCUS       DATGJT010000530         2437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_69993, whole genome shotgun sequence.
ACCESSION   DATGJT010000530 DATGJT010000000
VERSION     DATGJT010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69993"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..719
                     /gene="cysC"
                     /locus_tag="VKX24_09120"
     CDS             <1..719
                     /gene="cysC"
                     /locus_tag="VKX24_09120"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019591394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HLJ08686.1"
                     /translation="QAAYMPEDQVPEGARVLNISGTELRKRLSEGRDLPEWFTFPDIV
                     KELRKSYPPRHKQGFTVFFTGLSGSGKSTIANVLLVKLLEMGGRPVTILDGDVVRKHL
                     SSELGFSKEHRDINIRRIGYVASEITKNGGIAICAPIAPYDQTRKDVRSMVEEGGGFI
                     LVHVATSLETCEARDRKGFYAKARAGIIKEFTGISDPYEEPDDAEMVIRTEELTAEEA
                     AQEIILYLEREGYIGPEADI"
     gene            complement(1012..>2437)
                     /locus_tag="VKX24_09125"
     CDS             complement(1012..>2437)
                     /locus_tag="VKX24_09125"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HLJ08687.1"
                     /translation="GLALALFYSVAVATPSYVSHAKVLVSPITTDVTPQSVDKLVIMG
                     SEREIATSTNVALIAKDRMKSTASVTDLQKKVNVAVVGTTQFLDVACSDKTKLGAQTC
                     SQAFADAYLQFKTQEATKDRDARIASANAALAPINAQIVAATQRLAQATPLSAAQAEA
                     QSTLKSLQDQGAPYRQTLADMAKLNVNDPGNVVNPANRPGQPDSPKPKQNAAIGAFFG
                     LFLGLLVAFGRDRVDNRLRGRVDLEEYLRAPVLATVPRTRRNGRTAPTLVTMQHPNSP
                     ASEAYRALRTRVLVMAERQGLKTIMVASPTGEDGKTAIAANLAVSLAQVGKRVVLLSA
                     DLRGSKVHQYFGLDNERGLSNVLAGEMPPWEAVQEPAGLERLWVFGSGPVPAQPAELL
                     QSDLMRELLAERRKVADFVIIEAPAALNASDCLALAPLVDGILVVADAKHTDRDEVEQ
                     VRIQFEQVGGQVVGAVMSNAAGTR"
BASE COUNT          341 a          799 c          920 g          377 t
ORIGIN      
        1 accaggccgc ctacatgccc gaggaccagg tgcccgaggg cgcccgggtg ctcaacatct
       61 ccgggacgga gctgcgcaag cggctcagtg aaggccgtga cctgccggag tggttcacct
      121 tccccgacat cgtgaaggag ctccgcaaga gctacccgcc ccggcacaag cagggcttca
      181 cggtgttctt caccggcctg tcgggctcgg gcaagtcgac catcgccaac gtcctgctgg
      241 tgaagctgct ggagatgggc ggccggccgg tgacgatcct cgacggcgac gtcgtccgca
      301 agcacctctc gtcggagctc ggcttctcca aggagcaccg cgacatcaac atccgccgga
      361 tcggctacgt cgcctccgag atcaccaaga acggcggcat cgccatctgc gccccgatcg
      421 ccccgtacga ccagacccgc aaggacgtcc ggtcgatggt cgaggaaggc ggcgggttca
      481 tcctcgtcca cgtggccacc tcgctcgaga cctgcgaggc ccgcgaccgc aagggcttct
      541 acgccaaggc ccgggcgggg atcatcaagg agttcaccgg catctccgac ccctacgagg
      601 agccggacga cgccgagatg gtcatccgca ccgaggagct gaccgctgaa gaggcggccc
      661 aggagatcat cctgtacctc gagcgcgagg gctacatcgg ccccgaagcc gacatctagc
      721 agctcgcggt tcggtttgcc gagggggctc gacccgtccg ggtcgggccc cctcgccgcg
      781 tccgccgccg cccggcttcg taggtaggta ggtaggtagg taggccgatc cggcgcccgg
      841 tctcgttctg gcgttcctga gggccgccgt gcggccctga ggaacgccgg ttcggttcgg
      901 ggcggggggg ccggagtggt cgggtgggcc ggggctgccg gtggacgcgg cgaggcccgg
      961 ccgggcggcc gggcctctga agccgggact gctggtggtg agggtgaact actagcgggt
     1021 gccggcggcg ttgctcatga cggcgccgac cacctggccg ccgacctgct cgaactggat
     1081 ccggacctgc tcgacctcgt cgcggtcggt gtgcttggcg tcggccacca cgaggatgcc
     1141 gtcgacgagg ggggcgaggg ccaggcagtc ggaggcgttg agcgccgccg gggcttcgat
     1201 gatcacgaag tcggccacct tgcgccgctc ggccaggagc tcccgcatca ggtcgctctg
     1261 gaggagctcg gccggctggg ccgggaccgg gccgctgccg aagacccaga ggcgctcgag
     1321 accggccggc tcctggaccg cctcccaggg cggcatctcg ccggccagga cgttggacag
     1381 gccgcgctcg ttgtcgagcc cgaagtactg gtggaccttc gagccccgca ggtcggccga
     1441 gaggagcacg acccgcttgc cgacctgggc cagggagacg gccaggttgg cggcgatggc
     1501 ggtcttgccg tcctccccgg tgggggaggc gaccatgatc gtcttgaggc cctggcgctc
     1561 ggccatgacg agcacgcggg tccggagggc gcggtaggcc tccgacgccg ggctgttggg
     1621 gtgctgcatc gtgaccagcg tgggagcggt gcgcccgttg cgcctggtgc ggggcacggt
     1681 ggccagcacc ggagcccgca ggtactcctc caggtcgacc cgaccccgga gccggttgtc
     1741 gacccggtcc cgcccgaagg ccaccagcag acccaggaac aggccgaaga aggcgccgat
     1801 ggcggcgttc tgcttcggct tggggctgtc aggctggccg ggccggttgg ccgggttcac
     1861 cacgttgccc gggtcgttga cgttgagctt ggccatgtcg gccagcgtct ggcggtaggg
     1921 ggcgccctgg tcctgcaggc tcttcagcgt cgactgggcc tcggcctggg cggcggacag
     1981 cggcgtggcc tgggccaggc gctgggtggc ggcgacgatc tgggcgttga tcggggccag
     2041 ggcggcgttg gcgctggcga tgcgggcgtc gcggtccttt gtcgcctcct gggtcttgaa
     2101 ctggaggtag gcgtcggcga aggcctggga gcaggtctgg gccccgagct tcgtcttgtc
     2161 gctgcaggcg acgtcgagga actgggtcgt gcccaccacg gcgacgttga ccttcttctg
     2221 gaggtcggtg accgacgccg tggacttcat ccggtccttg gcgatgaggg cgacgttggt
     2281 cgacgtggcg atctcgcgct cgctgcccat gatgacgagc ttgtcgacgc tctgcggcgt
     2341 gacgtccgtg gtgatcgggc tgacgagcac cttggcgtgc gacacgtacg acggcgtggc
     2401 gacggcaacg gagtagaaaa gggccagcgc cagaccg
//
LOCUS       DATGJT010000531         2995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1207687, whole genome shotgun sequence.
ACCESSION   DATGJT010000531 DATGJT010000000
VERSION     DATGJT010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1207687"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VKX24_09130"
     CDS             complement(<1..574)
                     /locus_tag="VKX24_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08688.1"
                     /translation="MLSARRVTAEPDAVPEAVDDAAPDRRPPAARRLPAGRRRRLPAG
                     AAGPILAAALALFLVRGVAGGRPPAGEDVMAHLIRADFALPQLVAHLRADGWLPRMVL
                     GQQEFLFNGPGLTWLVGLGRVLTLGALSTTGALKVVTMAGVVALPPSVAFLARSYGLT
                     RRAAGLAAVLSLLVSSPYGPGLDGLFTVGLI"
     gene            666..>2995
                     /gene="secA"
                     /locus_tag="VKX24_09135"
     CDS             666..>2995
                     /gene="secA"
                     /locus_tag="VKX24_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014142764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HLJ08689.1"
                     /translation="MGAFDKILHLGEGRKLKALQRIVPEVGAFEPEIKALSDDQLVAK
                     TAEFRQRLDNGEDLDDLLTEAFAVVREAAWRVLGQRHFDVQIMGGTALHFGWVAEMKT
                     GEGKTLVSTLPAYLNGLSGKGVHLVTVNDYLAKRDSEWMGRVHRFLGLTVGLVIPDID
                     DPDIKRQNYACDITYGTNNEFGFDYLRDNMAQAREYMVQRGHNFAIVDEVDSILIDEA
                     RTPLIISGPVDDAAVLYVQFARIVAGLQNERDYEVDEKKKTVAPTEEGVTRVEEALGV
                     ENLYDNINQNFVHQLQAALRAKELFKRDVDYVVADGEVKIVDEFTGRILEGRRWSEGL
                     HQAVEAKEGVKIKEENQTLATITLQNYFRLYDKLSGMTGTGVTEAGEFAHTYNVEVVP
                     IPTNKPMIRLDQADLIYKTEEAKFNAVVEDLVQRHEKGQPVLVGTISVEKSEYLSRQL
                     DKRGIPHTVLNAKQHEREAHIVTQAGRIGSVTVATNMAGRGVDIILGGNPEGLADQEI
                     QREGSSKIENPERWTELFNRFKPECDAEGDEVREVGGLYVLGTERHESRRIDNQLRGR
                     SGRQGDPGESRFYLSLEDDLMRIFATGAMNWVMGKALPDDVPIEAKMVSKAIERAQRT
                     VEDRNFEIRKDVLKYDEVMNEQRKVVYKRRQQVLDGEDLKEQALEAIQAAITRAVDTF
                     LPGDFEEEWDFGELLRYVAQYYPTDTTEAVLEEIGNRYNITDHLIEEALAKYEEKEAA
                     VGEENLREIERRVMLSVIDQKWREHLYEMDYLQEGIG"
BASE COUNT          572 a         1010 c         1036 g          377 t
ORIGIN      
        1 ggatgagccc caccgtgaag aggccgtcga ggccggggcc gtagggactc gacacgagca
       61 gggagaggac ggcggccagg cccgccgccc gccgggtcag cccgtaggac cgggccagga
      121 aggccaccga ggggggcagc gccacgacac cggccatggt gacgaccttg agggcgcccg
      181 tggttgacag ggcgccgagc gtcaggaccc tgccgaggcc gacgagccag gtcagccccg
      241 ggccgttgaa caggaattcc tgctggccga ggaccatgcg ggggagccac ccgtccgccc
      301 ggagatgggc gaccagctgc gggagggcga agtcggcccg gatgaggtgg gccatgacgt
      361 cctccccggc cggtggccgc ccgccggcga ccccgcggac caggaacagc gccagggcgg
      421 cggccaggat cggacccgcc gcaccggccg gcaaccgtcg ccgccggccg gccggcagcc
      481 gccgggcggc cggcgggcgg cggtctggag ccgcgtcatc gacggcttcg gggacggcgt
      541 ccggttcggc ggtgacccgc cgggcgctca gcaccgtcgg atgctattgc ccccggccga
      601 cgtgtccgat tcgcggcgcc agcgggggcg gcgggactcg gacgcgtcgg tagactcgat
      661 tctctatggg agctttcgac aagatcctcc acctgggcga agggcgcaag ctcaaggcgc
      721 tgcagaggat cgtccccgag gtcggggcct tcgagcccga gatcaaggca ctgtcggacg
      781 atcaactggt ggccaagacc gcggagttcc gccagcgcct cgacaacggg gaggatctcg
      841 acgacctcct gacagaggcc ttcgccgtgg tccgggaggc ggcgtggcgg gtgctgggcc
      901 agcgccactt cgacgtccag atcatgggcg ggacggcgct gcacttcggt tgggtggcgg
      961 agatgaagac cggcgagggc aagaccctcg tgtccacgct tcccgcctac ctcaacggcc
     1021 tgtcggggaa gggcgtccac ctggtcacgg tcaacgacta cctggccaag cgcgactcgg
     1081 agtggatggg gcgggtgcac cgcttcctcg gcctcaccgt cgggctcgtc atccccgaca
     1141 tcgacgaccc cgacatcaag cggcagaact acgcctgcga catcacctac ggcaccaaca
     1201 acgagttcgg gttcgactac ctgcgcgaca acatggccca ggcccgggaa tacatggtcc
     1261 agcggggcca caacttcgcc atcgtcgacg aggtcgactc gatcctcatc gacgaggccc
     1321 gtacgccgct catcatctcc ggtccggtcg acgacgccgc cgtcctctac gtgcagttcg
     1381 cccgcatcgt ggccggcctc cagaacgagc gggactacga ggtcgacgag aagaagaaga
     1441 ccgtcgcccc gaccgaggag ggcgtcaccc gggtcgagga ggcgctcggc gtcgagaacc
     1501 tctacgacaa catcaaccag aacttcgtcc accagctcca ggcggcgctg cgggccaagg
     1561 agctgttcaa gcgcgacgtc gactacgtcg tggccgacgg cgaggtcaag atcgtcgacg
     1621 agttcaccgg ccgcatcctg gagggccggc ggtggagcga aggcctccac caggccgtcg
     1681 aggccaaaga gggcgtgaag atcaaggagg agaaccagac tctcgccacg atcacgctcc
     1741 agaactactt ccggctctac gacaagctct ccggcatgac cggtaccggg gtcaccgagg
     1801 ccggggagtt cgcccacacc tacaacgtcg aggtcgtccc gatcccgacc aacaagccga
     1861 tgatccggct cgaccaggcc gacctcatct acaagaccga agaggccaag ttcaacgccg
     1921 tcgtcgagga cctcgtgcag cgccacgaga agggccagcc cgtcctcgtc ggcacgatct
     1981 cggtcgagaa gtcggagtac ctctcccgcc agctcgacaa gcgcggcatc ccccacaccg
     2041 tgctcaacgc caagcagcac gaaagagaag cccatatcgt cacccaggcc ggccggatcg
     2101 ggtcggtcac ggtggccacc aacatggccg ggcggggcgt cgacatcatc ctcggtggga
     2161 atcccgaggg cctggccgac caggagatcc agcgggaagg gtcgtcgaag atcgagaacc
     2221 ccgagcgctg gaccgagctc ttcaaccggt tcaagcccga gtgcgacgcc gagggcgacg
     2281 aggtccgcga ggtcggcggc ctctacgtgc tcggcaccga gcggcacgag tcgcgccgca
     2341 tcgacaacca gctccgcggc cgctccggcc gccagggcga cccgggcgag agccgcttct
     2401 atctctcgct ggaagacgac ctcatgcgga tcttcgccac cggagccatg aactgggtca
     2461 tgggcaaggc cctccccgac gacgtcccga tcgaggcgaa gatggtgtcg aaggccatcg
     2521 agcgggccca gcggacggtg gaggaccgca acttcgagat ccggaaagac gtcctcaagt
     2581 acgacgaggt catgaacgag cagcgcaagg tggtctacaa gcgccgccag caggtgctcg
     2641 acggggaaga cctgaaggag caggcgctcg aggccatcca ggcggccatc acccgggcgg
     2701 tcgacacgtt cctgcccggc gacttcgagg aggagtggga cttcggcgag ctgctccgct
     2761 acgtcgccca gtactacccg accgacacga ccgaggcggt gctggaggag atcggcaatc
     2821 gctacaacat caccgaccac ctcatcgagg aggccctggc caagtacgag gagaaggagg
     2881 ccgcggtcgg ggaggagaac ctccgggaga tcgagcgccg ggtgatgctg tcggtcatcg
     2941 accagaagtg gcgcgagcac ctctacgaga tggactacct gcaggagggc atcgg
//
LOCUS       DATGJT010000532         2296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1418753, whole genome shotgun sequence.
ACCESSION   DATGJT010000532 DATGJT010000000
VERSION     DATGJT010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1418753"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VKX24_09140"
     CDS             complement(<1..281)
                     /locus_tag="VKX24_09140"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08690.1"
                     /translation="MGVPRLILTCGLPGAGKTELARRLAAQRGALRLSQDEWLWALGT
                     TPWDAETRERLDHQLWRVSQELLGLGTSVILDFGLWAKAERDEMRSVARG"
     gene            389..1867
                     /locus_tag="VKX24_09145"
     CDS             389..1867
                     /locus_tag="VKX24_09145"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ08691.1"
                     /translation="MTLAPATEAERDRALEVLLGADLEPIVDMVGWSPAPGVYDVASA
                     DGAVRFRRDPDGGAFTVDWVSGANPLAVQDQTRFAGLEAERATPHPRRDQNSYPNAFE
                     QFAQVFDHSSAPDLCVIHSPSHHWAEHGGHLGEHGSLDVIQARAPFIVSGAGVARLGM
                     ADLGCRLVDVAPTMLRVLSAEGRLSRQDGEVVEPIVAEPGRARYLIGFLWDGANPNVL
                     YDLAARGEAPNVARLIGEGTACRYGALASLPTVTLANHTGILTGSHPGHHGILHNAWI
                     DRRTGAQVITNSPSTWATSMQRLNDGVETLHHAVKRQFPGVHTASINEPCDAGADYST
                     FGLVRSGSRPEPPPGPEDLPDATIRFVRPSKDYRWASRSDHTAVDQFQKLWGDRDARP
                     PTFTWVNFTLTDSAFHEGGPYSEMAVSAVRDSDARLGRILEAVERAGVLSDCAFFLVA
                     DHGMEESDPGVRGDWDEALAAAGVPVRDEGYGFLYLTDHGAG"
     gene            1869..>2296
                     /locus_tag="VKX24_09150"
     CDS             1869..>2296
                     /locus_tag="VKX24_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014146087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08692.1"
                     /translation="MRRALLALAAVPLAALLLSGCFVTGPGPMATYTVQAQPPAGSCH
                     YSYVGTFPLPDPNCTPGAISPDVTQSNIASTICSSGYTASIRPPESITEPEKEANAAS
                     YGYTGSSGTAEYDHLIPLELGGDPNAPQNLWVEPNDNPNAT"
BASE COUNT          326 a          921 c          748 g          301 t
ORIGIN      
        1 ccccgggcga ccgatcgcat ctcgtcgcgc tcggccttcg cccagagccc gaagtcgagg
       61 atcacgctcg tcccgaggcc gaggagctct tgggacacgc gccacagctg gtggtcgagc
      121 cgctccctgg tctccgcatc ccagggggtg gtgccgaggg cccagagcca ctcgtcctgg
      181 ctgagacgca gggcgccgcg ctgcgcggcg aggcgccggg cgagctcggt cttccccgct
      241 ccgggcaacc cgcaggtgag gatcagtcgg ggaacaccca ccggctcagt ccagcagagc
      301 gccccgcccc ggggcatccc gcccggacac cggcgcccgc accgccacga ccggtgcggt
      361 tgtcagcacc ctgccgtacg ctgccgccgt gaccctcgct ccagcgaccg aagccgagcg
      421 cgaccgggcg ctcgaggttc tcctcggcgc tgacctcgaa ccgatcgtcg acatggtcgg
      481 ctggtcgcct gcccccggcg tctacgacgt cgcctcggcg gacggtgccg tccgcttccg
      541 gcgcgacccc gacggcggcg ccttcaccgt cgactgggtc agcggggcga accccctcgc
      601 cgtccaggac cagacccggt tcgccgggct cgaggcggag cgggcgaccc cgcacccccg
      661 ccgggaccaa aacagctacc ccaacgcctt cgaacagttc gcgcaggtgt tcgaccacag
      721 ctccgcgccc gacctgtgcg tcatccacag tccctcgcac cactgggccg aacacggggg
      781 acacctcggc gagcacggct ccctcgacgt gatccaggcc cgggccccgt tcatcgtctc
      841 gggcgccggg gtggcgcgcc tcggcatggc cgatctcggc tgccggctgg tcgacgtggc
      901 gcccacgatg ctgcgggtgc tcagcgccga gggtcgtctc tcccgtcagg acggcgaggt
      961 cgtggagccg atcgtcgccg agcccggccg ggcccggtat ttgatcggct tcctctggga
     1021 cggggccaac cccaacgtcc tctacgacct cgccgcgcgc ggcgaggcgc cgaacgtggc
     1081 ccggctcatc ggggagggca ccgcctgccg ctacggcgcg ctggcctccc ttccgaccgt
     1141 gaccctcgcc aaccacaccg ggatcctcac cgggagccac cccggccacc acgggatcct
     1201 ccacaacgcg tggatcgacc gtcggaccgg cgcccaggtg atcaccaact cgccgagcac
     1261 ctgggccacg tccatgcagc ggctcaacga cggcgtggag acgctccacc acgcggtcaa
     1321 gcgacagttc cccggcgtgc acaccgcgtc gatcaacgag ccctgcgacg ccggcgccga
     1381 ctactcgacc ttcggtctgg tccgcagcgg cagccggccc gagccgccgc ccgggcccga
     1441 ggacctcccc gacgccacca tccgcttcgt ccggccgtcc aaggactacc gctgggcgtc
     1501 gcgttcggac cacactgccg tcgaccagtt ccagaagctg tggggggacc gggacgcccg
     1561 gccaccgact ttcacctggg tcaacttcac cctgaccgac tccgccttcc acgagggcgg
     1621 cccgtactcg gagatggcgg tcagcgcggt gcgcgacagc gacgcccgtc tcggccggat
     1681 cctcgaggcg gtggagcggg cgggggtcct ctccgactgc gccttcttcc tcgtcgccga
     1741 ccacgggatg gaggagtccg accccggggt gcgcggcgac tgggacgagg cgctcgccgc
     1801 cgccggggtg ccggtccgcg acgagggcta cggcttcttg tacctcaccg accacggtgc
     1861 cggctgagat gcgccgggcc ctcctcgccc tcgcggcggt cccgttggcc gccctcctcc
     1921 tgagcgggtg cttcgtcacc ggtccgggcc cgatggccac ctacaccgtc caggcgcaac
     1981 cgccggcggg gtcctgccac tacagctatg tcggcacctt cccgctgccc gaccccaact
     2041 gcacgcccgg ggcgatcagc cccgacgtca cccagtccaa catcgcctcc acgatctgct
     2101 cgagcggcta caccgcgagc atccggcccc ccgagagcat caccgagccg gagaaggagg
     2161 cgaacgccgc gtcctacggc tacacggggt cctccggcac ggccgagtac gaccacctga
     2221 tcccgctcga gctcggcggg gatccgaacg ccccccagaa cctctgggtc gagccgaacg
     2281 acaacccgaa cgcgac
//
LOCUS       DATGJT010000533         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_587743, whole genome shotgun sequence.
ACCESSION   DATGJT010000533 DATGJT010000000
VERSION     DATGJT010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587743"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..123
                     /locus_tag="VKX24_09155"
     CDS             <1..123
                     /locus_tag="VKX24_09155"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ08693.1"
                     /translation="KRFGRPDEVSGMVAFLASERAGFVTGIACNIDGGYTKSIA"
     gene            173..1060
                     /locus_tag="VKX24_09160"
     CDS             173..1060
                     /locus_tag="VKX24_09160"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ08694.1"
                     /translation="MSVLRRWLASVVLVVLAAGVLALPSTAASPTADRPYGLKVPAGY
                     DGSHPVPLVVLLHGYGSNGAQQAGYFGLPAEADKAGFLLAYPDGTRDRLSRRFWNATD
                     ACCDFFHSGVDDVAYLDAVIAEISSKYPIDPARIYVVGHSNGAFMAHRYACDRASKVA
                     AIVTLAGMQWKDPGKCPAGSPVSLLHVHGRNDMTISYEGGATPEGAYPGAVETVDEWA
                     AKDGCTGALGVTGRKLDLDQSIPGAETDEATWSGCPSGVADSLWTIEGGGHVPAFNGN
                     WAPAIWDFLAAHPKEASAS"
     gene            1151..1426
                     /locus_tag="VKX24_09165"
     CDS             1151..1426
                     /locus_tag="VKX24_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08695.1"
                     /translation="MAALVLVEVTLAFIVLCADSLPEGPARPAFERFVRAVLWPVTVG
                     RWFTHRNFPKLGRFAAIVWLLTTTGWLVSLEYDRTGARRMMLFVVLA"
     gene            1442..1663
                     /locus_tag="VKX24_09170"
     CDS             1442..1663
                     /locus_tag="VKX24_09170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08696.1"
                     /translation="MVWCVDAMSTDIHNRPVRRLVRSLFWFKAMTDYMRDEDNIKIAH
                     ASLTVWILLTTGWLLSLGSDRILRPLGKT"
     gene            1660..>2104
                     /locus_tag="VKX24_09175"
     CDS             1660..>2104
                     /locus_tag="VKX24_09175"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HLJ08697.1"
                     /translation="MILDGFRERRPFPGQDPFVVPHDGAFLLIQAARNDRRIVIKRFS
                     DLDRMDRNRTTVVWRPLRGSRRGRQLWAPELHEIGGRWYVYYAACDGQNENHRAYVLE
                     ADHPLGPYQWLGKVSDPRHDTWAIDMTVLQHDGRLYAVWSGWEGEQ"
BASE COUNT          304 a          759 c          717 g          324 t
ORIGIN      
        1 aagcggttcg gccggcccga cgaggtgtcg ggcatggtgg ccttcctggc ctccgaacgg
       61 gcgggcttcg tcaccgggat cgcctgcaac atcgacggcg gctacacgaa gtcgatcgcc
      121 tgagccgccg gtgcgggcga atgccgccat ccgcccgaac gtcatttgga gcatgagcgt
      181 gctgcgacgg tggttggcgt ccgtggtcct ggtcgtgctg gcggcggggg tgctggccct
      241 gccgtcgacg gccgccagcc ccaccgccga ccggccctac ggcctcaagg tccccgccgg
      301 ctacgacggg agccaccccg tcccgctggt ggtgctgctc cacggctacg gctccaacgg
      361 cgcccaacag gccggctact tcgggctccc cgccgaggcc gacaaggccg ggttcctgct
      421 ggcctatccc gacggcaccc gggaccggct cagccggcgc ttctggaacg ccaccgatgc
      481 ctgctgcgac ttcttccact ccggcgtcga cgacgtcgcc tacctcgacg ccgtcatcgc
      541 cgagatctcg tcgaagtacc cgatcgaccc ggcgaggatc tacgtcgtcg gccactccaa
      601 cggcgccttc atggcccacc gctacgcctg cgaccgggcg tccaaggtgg cggccatcgt
      661 cacgctggcc ggcatgcagt ggaaggaccc cggcaagtgc ccggcgggat cacccgtctc
      721 gttgctccac gtccacggcc gcaacgacat gacgatcagc tacgagggcg gcgccacccc
      781 cgaaggcgcc taccccgggg cggtggagac cgtcgacgag tgggcggcca aggatggctg
      841 caccggcgcg ctcggcgtca ccggccgcaa gctcgacctc gaccagtcga tccccggcgc
      901 cgagaccgac gaggcgacct ggagcggctg cccgtccggc gtggccgact cgctgtggac
      961 gatcgagggc ggcgggcacg tccccgcctt caacgggaac tgggcgccgg cgatctggga
     1021 cttcctcgcc gcccacccga aggaggcctc ggcttcgtaa ggtttcgcag gaaaacgggc
     1081 cctgcctggg gaaacaagac gggtacaacc cgttgtcccc gcagctctgc tgcttccgtc
     1141 ggagcacacc atggcggcct tggttctcgt ggaagtgacc ttggctttca ttgtgctgtg
     1201 cgccgactcg ctgcccgagg ggccggcccg tccggcgttc gagcggttcg tccgggcggt
     1261 gctgtggccg gtgacggtcg ggcggtggtt cacgcaccgg aacttcccca agctcgggcg
     1321 gttcgcggcg atcgtctggt tgctcaccac caccggctgg ctggtgtcgc tggagtacga
     1381 ccggacgggc gcccgcagga tgatgctgtt cgtcgtcctg gcctaatgca cgctggcctt
     1441 cgtggtgtgg tgcgtcgacg ccatgtcgac cgacatccac aaccgcccgg tccgccgcct
     1501 cgtgcggagc ctcttctggt tcaaggcgat gaccgactac atgcgggacg aggacaacat
     1561 caagatcgcc cacgccagcc tcacggtgtg gatcctcctc accaccggct ggctgctgag
     1621 cctcggcagc gaccgcatcc tgcggcccct cggcaagacg tgatcctgga cggcttccgg
     1681 gagcggcggc cgttccccgg ccaggacccg ttcgtcgtgc cccatgacgg cgccttcctg
     1741 ctgatccagg cggcccgcaa cgaccggcgg atcgtcatca agcgcttcag cgatctcgac
     1801 cggatggacc gcaatcgcac caccgtcgtg tggaggccgc tgcgggggag ccggcggggc
     1861 cggcagctgt gggcgcccga gctccacgag atcggcggcc ggtggtacgt ctactacgcc
     1921 gcctgcgacg ggcagaacga gaaccaccgg gcctacgtcc tcgaggccga ccacccgctc
     1981 gggccctacc aatggctggg gaaggtctcg gacccccgcc acgacacctg ggccatcgac
     2041 atgaccgtgc tccagcacga cgggcggctc tacgccgtgt ggtcgggctg ggagggagag
     2101 cagg
//
LOCUS       DATGJT010000534         3568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1208283, whole genome shotgun sequence.
ACCESSION   DATGJT010000534 DATGJT010000000
VERSION     DATGJT010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3568
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1208283"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..808)
                     /locus_tag="VKX24_09180"
     CDS             complement(<1..808)
                     /locus_tag="VKX24_09180"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08698.1"
                     /translation="MFRIALRRLATGKRRLAGTVLAVFLGVAFLAGTLALSDTLRANF
                     ADLFAAANSHIDVVVRGADQLKASGDAGPGLTQRGLLDASVVSRVAAVPGVADAVADI
                     QGFGQILGADGKALGGNGPPRLAGVWIPDLDLNAYRLVAGRAPGTPDEVVINRGAAKA
                     GHLGVGDTTIVETPEPVRVTIVGIATFGTADGFGTATFVAFTPGGAAAHLTKDPSKVS
                     RVLVKAQPGVSQATLAARVQAAVPASARAETITGAQLTKENVDDVTSGFLA"
     gene            complement(811..1518)
                     /locus_tag="VKX24_09185"
     CDS             complement(811..1518)
                     /locus_tag="VKX24_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012936321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08699.1"
                     /translation="MSATKVYGAGGDVAVRALDDITVEFPEGRFTAVMGPSGSGKSTL
                     LHCLAGLDSLTSGRVLVGGADLGSLSDKQLTLLRRDRIGFVFQSFNLVPTLSAEENIT
                     LPLALAGRRPDAAWFDEIVATVGLADRLRHRPSELSGGQQQRVAVARALVTRPEIVLA
                     DEPTGNLDSRSGAEILGFLRRAVTELGQTVVMVTHDPVAAGYADAALFLADGRLVDSL
                     PSPTAAGVLDRLKALGG"
     gene            complement(1605..1853)
                     /locus_tag="VKX24_09190"
     CDS             complement(1605..1853)
                     /locus_tag="VKX24_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018170597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08700.1"
                     /translation="MNTHTAILAVHHWGHGPGWWFLIPLLFWAAIIFLVVRAVRRCGR
                     FGPSWRSGEAVLAERFAKGEIDADEYRDRLTVLRERAK"
     gene            complement(1945..2607)
                     /locus_tag="VKX24_09195"
     CDS             complement(1945..2607)
                     /locus_tag="VKX24_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010352972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08701.1"
                     /translation="MIRVVLADDQALVRAGFRALLDAEADLTVVGEAGNGDEAVSLCR
                     ELRPDVVLMDIRMPGSDGLAATRAITAEDRLAGVRIVILTTFELDEYVFEALRAGASG
                     FLVKDTEPVELLRAVRAVAGGDALLSPGVTRRLIAAFARNAKEPGPARQLEILTDRER
                     EVLALVGEGLSNDEIAERLYMSPATAKTHINRSMAKLGARDRAQLVVAAYESGLVRPG
                     WL"
     gene            complement(2604..>3568)
                     /locus_tag="VKX24_09200"
     CDS             complement(2604..>3568)
                     /locus_tag="VKX24_09200"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HLJ08702.1"
                     /translation="YPVAVLEAAFLTTLAYVVVGFRLGPIWLGLIVAYVNAAWRGRRW
                     AAWATLAVGWAGFLWLPHWFGRDRAPVGQEVLGLAAWLLVLAAVAEVVKVRRERAQEA
                     FRVRREEAERRAGEERLQIAQELHDVLAHNISLISVQAGVGLHLIDEHPDQARAALAA
                     IKEASKEALGELRSVLDVLRREGDAAPLVPAPRLAADLDGLVARAASAGVAVRVEVTG
                     SERPLPPGVDRAAFRIAQEALTNVARHAGGARATVLIEYGVDAVTLQVDDDGPGGATS
                     SDGSGRGLTGMRERAVALGGRLDAGPRPGGGFRVRAWLPLGGDL"
BASE COUNT          468 a         1304 c         1383 g          413 t
ORIGIN      
        1 cggccaggaa cccgctggtg acgtcgtcga cgttctcctt ggtgagctgc gcgccggtga
       61 tcgtctcggc ccgggccgag gcgggcaccg cggcctgcac ccgggcggcc agcgtcgcct
      121 ggctgacgcc gggctgcgcc ttgaccagca cccgggagac cttgctcggg tccttggtga
      181 gatgggcggc cgcgcccccg ggcgtgaagg ccacgaaggt cgcggtgccg aagccgtcgg
      241 ccgtcccgaa ggtggcgatg ccgacgatcg tgacccgcac cggttcgggg gtctcgacga
      301 tggtggtgtc accgacccca aggtggccgg ccttggccgc cccccggttg atgacgacct
      361 cgtcgggcgt gcccggcgcc cgtccggcga cgaggcggta ggcgttgagg tcgaggtcgg
      421 ggatccacac cccggccagg cggggcgggc cgttgccgcc gagggccttg ccgtcggcgc
      481 ccaggatctg gccgaagccc tgaatgtcgg ccacggcgtc cgccacgccg gggacggcgg
      541 cgacccggct cacgaccgag gcgtcgagca ggccccgctg ggtcaggccc ggtccggcat
      601 cgccgctggc cttgagctgg tcggcgccgc ggacgacaac gtcgatgtgg ctgttggcgg
      661 cggcgaagag gtcggcgaag ttggcccgga gcgtgtcgga gagcgccagc gtccccgcca
      721 ggaaggcgac gccgaggaac acggcgagga ccgtcccggc caggcgccgc ttgccggtgg
      781 cgagccggcg gagggcgatg cggaacatgg tcagcctccc agggccttga gtcggtcgag
      841 gacgccggcg gcggtcgggg acgggagcga gtcgacgagg cggccgtcgg ccaggaacag
      901 ggcggcgtcg gcgtacccgg cggcgacggg gtcgtgggtg accatgacga cggtctgccc
      961 gagttcggtc accgcccggc ggaggaagcc gaggatctcg gcgccggacc gcgagtcgag
     1021 gttgccggtc ggctcgtcgg cgaggacgat ctccggccgg gtcaccagcg cccgggccac
     1081 cgccacccgc tgctgctgcc cgccggagag ttcggacggc cggtgccgga ggcggtcggc
     1141 gagcccgacg gtggcgacga tctcgtcgaa ccacgccgcg tcgggccggc ggccggccag
     1201 ggccagcggg agggtgatgt tctcctcggc gctgagcgtc gggacgaggt tgaacgactg
     1261 gaacacgaag ccgatccggt cgcggcgcag aagggtgagc tgcttgtcgg acagggagcc
     1321 gaggtcggcg ccgccgacga ggacccggcc cgaggtgagc gagtcgaggc cggccaggca
     1381 gtggagcagc gtcgacttgc ccgatccgga cgggcccatg acggcggtga agcggccctc
     1441 ggggaattcg acggtgatgt cgtcgagggc ccggacggcg acgtcgcccc cggcgccgta
     1501 gaccttggtg gcggacaggg cggcggccgc cggccggcga ccggcggggc cggcggcggt
     1561 gagaccgccg gcgcccgcgg tcggccgggt ggccgtgacg ccgctcactt ggcccgctcc
     1621 cgcaggacgg tgagccggtc gcggtactcg tcggcgtcga tctcgccctt ggcgaagcgc
     1681 tcggcgagaa ccgcttcgcc gctgcgccac gacggaccga accggccgca acggcggacg
     1741 gcccgcacga cgaggaagat gatcgcggcc cagaacagca gcggaatgag gaaccaccag
     1801 ccggggccgt ggccccagtg gtggacggcg aggatggcag tgtgtgtgtt catagcgtga
     1861 tcgtcggcaa tccgcccgcc gcgctcgtca acccaccgtg ggttcttgcc ctaccgcatc
     1921 cgccgtacgc cgccgccggc ggtgctacag ccagccgggg cggacgaggc cggactcgta
     1981 ggcggccacg accagctggg cccggtcgcg ggcgccgagc ttggccatcg accggttgat
     2041 gtgggtcttg gccgtggccg ggctcatgta cagccgctcg gcgatctcgt cgttggacag
     2101 gccctcgccg accagcgcca ggacctcccg ctcccggtcg gtcaggatct ccagctgcct
     2161 ggccgggccg ggctccttgg cgttgcgggc gaaggcggcg atcagccggc gggtcacccc
     2221 cggcgacagc agggcgtcgc ccccggcgac ggcccgcacc gcccgcagga gctcgacggg
     2281 ctcggtgtcc ttgaccagga acccgctggc gccggcccgc agggcctcga agacgtactc
     2341 gtcgagctcg aacgtcgtca ggatcacgat gcgcacgccg gccaggcggt cctcggcggt
     2401 gatggcccgg gtggcggcga gcccgtccga ccccggcatg cggatgtcca tgaggacgac
     2461 gtcgggccgc agttcccggc agagggacac ggcttcgtcg ccgttgcccg cctcgccgac
     2521 cacggtgagg tcggcctcgg cgtcgaggag ggcccggaac ccggcccgga ccagcgcctg
     2581 gtcgtcggcc agcacgaccc ggatcacagg tcgccaccga gcggcagcca ggcccgcacc
     2641 cggaagccgc ccccgggacg ggggccggcg tcgagacgac cgccgagggc gacggcccgc
     2701 tcccgcatgc cggtgaggcc ccgcccgctg ccgtcggagg acgtcgcgcc gccggggccg
     2761 tcgtcgtcga cctgcagggt cactgcgtcg accccgtatt cgatgaggac ggtggcgcgg
     2821 gcgccgccgg cgtggcgggc gacgttggtc agcgcctcct gggcgatccg gaaggcggcc
     2881 cggtcgacgc cgggcgggag cggccgctcc gagcccgtca cctcgacccg caccgccacc
     2941 cccgccgagg ccgcccgggc cacgaggccg tcgaggtcgg cggcgagccg gggggcgggc
     3001 accagcgggg cggcgtcgcc ctcccgccgg aggacgtcga ggaccgagcg cagctccccc
     3061 agcgcctcct tcgacgcctc cttgatggcc gccagcgccg cccgggcctg gtcggggtgc
     3121 tcgtcgatca ggtggaggcc cacgccggcc tggacgctga tcagcgagat gttgtgggcc
     3181 agcacgtcgt ggagctcctg ggcgatctgg agccgctcct cgccggcccg ccgctccgcc
     3241 tcctcccggc gcacccggaa cgcctcctgg gcccgctccc gccggacctt caccacctcg
     3301 gccacggcgg ccagcaccag cagccaggcg gccagcccga gcacctcctg gccgacgggg
     3361 gcccggtccc gcccgaacca gtggggcagc cagaggaacc ccgcccagcc gacggccagc
     3421 gtggcccacg ccgcccaccg ccgcccccgc caggcggcgt tgacgtaggc cacgatcagc
     3481 cccagccaga ttggccccag ccggaagccg acgacgacgt aggccagcgt cgtgaggaag
     3541 gccgcctcca gcaccgccac cgggtacc
//
LOCUS       DATGJT010000535         2119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1002058, whole genome shotgun sequence.
ACCESSION   DATGJT010000535 DATGJT010000000
VERSION     DATGJT010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002058"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..843)
                     /gene="prcA"
                     /locus_tag="VKX24_09205"
     CDS             complement(112..843)
                     /gene="prcA"
                     /locus_tag="VKX24_09205"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013770949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005839 - proteasome core complex
                     [Evidence IEA];
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit alpha"
                     /protein_id="HLJ08703.1"
                     /translation="MPFYVPPEQAMRDRAEYAQKGIAQAAPLIATVYEHGILIVAENP
                     RRTLHKISEIYDRIAFGGAGRYNEYEQLRVAGVRHADTKGFAFSREDVDARSLANLYG
                     QYLNNVFTHEIKPLEVDILVAELSDGERPDQLYRIAYDGYITDEAHYAALGGDAEVIA
                     ERIGQSFTEGWDLAGALHAAVGALAGENRTLGAADLEVAVLSRQNGRRAFRRIEGAEL
                     ADLLAASAPAAAPPAAEEPGPGSES"
     gene            complement(846..1658)
                     /gene="prcB"
                     /locus_tag="VKX24_09210"
     CDS             complement(846..1658)
                     /gene="prcB"
                     /locus_tag="VKX24_09210"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005839 - proteasome core complex
                     [Evidence IEA];
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit beta"
                     /protein_id="HLJ08704.1"
                     /translation="MALPIFHPAEDPGPDFTGLLRKSGAPPLPRLEAALTAPHATTVA
                     ALRFADGVVMAGDRRATEGYSIAHRAMDKVFPADRWSAVAIAGAAGPAVEMVRLFQVQ
                     LEHYEKVEGVTLSLEGKANQLAQMVREHLPMAIQGLAVVPLFAGYDLRRGVGRIYTYD
                     VTGGHYEESDFQSIGSGGRDARNTIKLGFREGLSRAEAIELAIEALFEAADEDTGTGG
                     PDLVRGIYPLVAVVDAEGYARVDEGEVADRFLSLIERRRAERGSDRGRGEPQ"
     gene            complement(1666..1866)
                     /locus_tag="VKX24_09215"
     CDS             complement(1666..1866)
                     /locus_tag="VKX24_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-like protein Pup"
                     /protein_id="HLJ08705.1"
                     /translation="MPEREQKRRSAPSRTETEVVEDDQAPASPRGEKLKADLDDLLDE
                     IDEVLEDNAEEFVRNYVQKGGQ"
     gene            complement(1878..>2119)
                     /locus_tag="VKX24_09220"
     CDS             complement(1878..>2119)
                     /locus_tag="VKX24_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="proteasome accessory factor PafA2 family
                     protein"
                     /protein_id="HLJ08706.1"
                     /translation="ATAVTEPPTRTRAWFRGRCLSEWPNAVVTANWDSLVFDLGADPL
                     RRVPMMDPLKGTAEHTASLFESCASPSELLERLSS"
BASE COUNT          288 a          735 c          760 g          336 t
ORIGIN      
        1 cgctgcccgc gcagggtgaa ggtcaccccg tactcgttct cgagtccgaa gatgcggcgc
       61 ctcacgaagc caccgtatcg ttagataccc gctcgggggc agaacccctg gtcagctttc
      121 ggagccgggt cccggttcct cggcggcggg gggggctgcg gcgggcgccg acgccgcgag
      181 caggtcggcc agctcggccc cctcgatgcg ccggaaggca cgccgcccgt tctggcggga
      241 cagcaccgcc acctcgagat ccgcggcccc gagggtgcgg ttctcgccgg cgagggcccc
      301 gacggcagcg tgcagcgcgc cggccaggtc ccagccctcg gtgaaggact ggccgatccg
      361 ctcggcgatg acctcggcgt cgcccccgag ggcggcgtag tgcgcctcgt cggtgatgta
      421 gccgtcgtag gcgatgcggt agagctggtc gggccgctcc ccgtcactga gctcggcgac
      481 caggatgtcg acctccaggg gcttgatctc gtgggtgaag acgttgttca ggtactggcc
      541 gtaaaggttg gcgagcgagc gggcgtcgac gtcctcacgg ctgaacgcga accccttggt
      601 gtcggcgtgg cggacgccgg ccacgcgcag ttgctcgtac tcgttgtacc gcccggcgcc
      661 cccgaaggcg atgcggtcgt agatctcgct gatcttgtgc agcgtgcgcc gggggttctc
      721 ggcgacgatc aggatgccgt gctcgtagac ggtggcgatg agcggggcgg cctgggcgat
      781 gcccttctgg gcgtactcgg cccggtcccg catcgcctgt tcgggcggga cgtagaaggg
      841 catgctcact ggggttcacc cctgccccgg tcgctccccc gctcggcccg gcgccgttcg
      901 atgagggaga ggaaccggtc ggccacctcg ccttcgtcga cccgggcgta gccctctgcg
      961 tccacgacgg ccaccaacgg gtagatcccg cggacgaggt ccggcccgcc ggtccccgtg
     1021 tcctcgtcgg ccgcctcgaa cagtgcctcg atggcgagct cgatcgcctc ggcccggctc
     1081 agcccctccc tgaagccgag cttgatggtg ttgcgggcgt cccgaccgcc ggagccgatc
     1141 gactggaagt cggactcctc gtagtggccg ccggtgacgt cgtaggtgta gatccgcccg
     1201 acgccgcggc gcaggtcgta tcccgcgaac aagggcacga cggcaagacc ctggatcgcc
     1261 atcggcaggt gctcgcgcac catctgggcg agctggttgg ccttgccctc gaggctgagg
     1321 gtgacccctt ccaccttctc gtagtgctcg agctggacct ggaacagccg gaccatctcg
     1381 accgccgggc ccgcagcgcc ggcgatggcc acggcggacc agcggtcggc cgggaagacc
     1441 ttgtccatgg cccgatgggc gatggagtag ccctcggtcg ctcgccggtc ccccgccatc
     1501 accacgccgt cggcgaagcg cagggcggcc acggtggtgg cgtgcggggc ggtcagcgcg
     1561 gcctcgagcc ggggcagcgg gggcgcgccg gacttcctga gcaagcccgt gaagtccgga
     1621 cccgggtcct ccgccgggtg gaagatgggc agggccaccg gcgggttact gcccgccctt
     1681 ttgcacgtag ttgcggacga actcctccgc gttgtcctcg aggacctcgt cgatctcgtc
     1741 gaggagatcg tcgaggtcgg ccttcagctt ctcgccgcgg ggcgacgctg gcgcctggtc
     1801 gtcctcgacc acctcggtct cggtgcgcga gggagcgctc cggcgcttct gttcacgttc
     1861 tggcattgat catcacctca ggaactcaag cgctccaaga gctcggaagg gctcgcacag
     1921 gactcgaaca acgaggccgt gtgctcggcc gttcccttga gcgggtccat catagggacg
     1981 cggcgcaacg ggtcggcacc caggtcgaat acgagcgagt cccagttcgc agtgaccacg
     2041 gcattcggcc actccgacag gcagcggccc cggaaccagg cccgggtccg ggtcgggggc
     2101 tcggtgaccg cggtcgcca
//
LOCUS       DATGJT010000536         3127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_588053, whole genome shotgun sequence.
ACCESSION   DATGJT010000536 DATGJT010000000
VERSION     DATGJT010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588053"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..801)
                     /locus_tag="VKX24_09225"
     CDS             complement(37..801)
                     /locus_tag="VKX24_09225"
                     /inference="COORDINATES: protein motif:HMM:NF039623.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5995 family protein"
                     /protein_id="HLJ08707.1"
                     /translation="MSATARPAVRRCPVLRAAPVGSLPEVVSRLGEIRDSVAAVAPEC
                     GVARFSDLYLTITGRIRDHVGTGAFFDDDRYLARLDVVFANRYFDALRAWAGPAGDVA
                     AAGGLVPDCWRLLFDAPDDGEITAFQLAAAGVNAHINLDLAVAVVETGREFGDAELGA
                     GRRHDDYLKVNDVFAEEMGTLLDRLVDDPPGRAGHPVLGRLITAVVAVARRHAWEDAE
                     ALWPIPRSSEAWTAREFRMDAVACWFGRRILADLPG"
     gene            complement(798..1463)
                     /locus_tag="VKX24_09230"
     CDS             complement(798..1463)
                     /locus_tag="VKX24_09230"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HLJ08708.1"
                     /translation="MARSGKAGAGPARVVTVSASYGASGSLIAPAVAARLGLPFYDRL
                     IPARDAVAAVGAEGDAGERMTDEERLAARRTSFLDRLAHLTGGLGLPVPAGEDIGDHV
                     RETVERSIRDIAAGSGGVILGRGAMIVLAGQPGAFHLRLDGPGERRCARAMAFEAIDE
                     ATARHRLVETDRARARYFTRLYGRDAHDPALYHLVVDSTVLPVEACVRLVVDAATAFW
                     AAG"
     gene            complement(1526..1648)
                     /locus_tag="VKX24_09235"
     CDS             complement(1526..1648)
                     /locus_tag="VKX24_09235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08709.1"
                     /translation="MADDRCLYLPWYESSSDGLDELAQIKRVVEQLRDRRDGQR"
     gene            1720..2265
                     /locus_tag="VKX24_09240"
     CDS             1720..2265
                     /locus_tag="VKX24_09240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08710.1"
                     /translation="MVDIVLRSELVDEILEPHEKGLGLSYLGYRNHCLRMLNIGRYLV
                     PDEPGRDDRLAVMAAFHDLPFFLDGDLDYLGRASAWAGDWLAATGRAEWEPEIRLMIH
                     NHHKVRPYTGPSAPMVEAMRKADWIDVSFTRVRFGIDRGFIRDVRAAFPINEAYKGIA
                     LPAIARYAFSHLSRPLPMMRW"
     gene            2262..>3127
                     /locus_tag="VKX24_09245"
     CDS             2262..>3127
                     /locus_tag="VKX24_09245"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08711.1"
                     /translation="MTERAATRLIVPGAVFALGLGGFLFLPGYLLDVGCTAMWMGLVG
                     LALYLPMAALRELPLNAAALTGLAAYLFAFVAHDGGAGHWLLGLAVAIGLITAASALS
                     GLGSLAVTGLYFTVVSLVVQVGIEKTVFSIGALTGGAAGRGVAQPDLHGWFDTGRAVY
                     LVAALVCLAVSGAVWYVKQTRLVSMWVLTGHQPEGADAVGLRRPVHKVVVFALSGLMV
                     GIAGCLAAFVNGTPPPVIQFGIIWSIILLAIPLASGMRTVSSVWLVAAGFTVIPQLLE
                     SHHINPNLLSGG"
BASE COUNT          387 a         1169 c         1132 g          439 t
ORIGIN      
        1 gagcggttcc cagcataccc gccggtcgtc cgatcctcag ccggggaggt cggcgaggat
       61 ccgccgcccg aaccagcagg cgacggcgtc catgcggaat tcccgggccg tccaggcctc
      121 cgaggaacgg ggaatcggcc acagggcctc ggcgtcctcc caggcgtggc ggcgggcgac
      181 ggcgacgacg gcggtgatga ggcgcccgag caccgggtgg ccggcccggc ccggcgggtc
      241 gtcgacgagc cggtcgagca gcgtgcccat ctcctcggcg aagacgtcgt tgaccttcag
      301 gtagtcgtcg tgccggcgtc cggcgccgag ctcggcgtca ccgaactccc gtcccgtctc
      361 cacgacggcc acggccaggt cgaggttgat gtgggcattg acgcccgccg ccgccagctg
      421 gaaggcggtg atctccccgt cgtcgggggc gtcgaacagc agccgccagc agtccggcac
      481 caggccgccc gcggcggcga cgtcgccggc cgggccggcc caggcccgga gggcgtcgaa
      541 gtagcggttg gcgaagacga cgtcgagccg ggccaggtac cggtcgtcgt cgaagaaggc
      601 gcccgtcccc acgtggtccc ggatccggcc ggtgatcgtc aggtacaggt cgctgaaccg
      661 ggccacgccg cactccgggg cgacggccgc cacggagtcc cggatctcgc ccagccggga
      721 gaccacctcg ggcaggctgc cgaccggagc ggcccgcagc acggggcagc ggcggacggc
      781 gggccgggcg gtggcgctca acccgcggcc cagaaggcgg tggcggcgtc gaccaccagc
      841 cggacgcagg cctccaccgg cagcacggtc gagtcgacca cgaggtggta gagggcggga
      901 tcgtgggcgt cgcgcccgta gaggcgggtg aagtagcggg cccgggcccg gtcggtctcc
      961 accaggcggt ggcgggcggt ggcctcgtcg atggcctcga aggccatggc ccgggcgcag
     1021 cgccgctcgc cgggcccgtc gaggcggagg tggaaggcgc cgggttgacc ggccagcacg
     1081 atcatcgccc cccgcccgag tatcaccccg ccggagccgg cggcgatgtc ccggatgctg
     1141 cgctcgacgg tctcccgcac gtggtcgccg atgtcctccc cggccgggac cgggaggccg
     1201 agcccgccgg tgagatgggc cagacggtcg aggaacgagg tgcgccgggc ggccaggcgc
     1261 tcctcgtcgg tcatccgctc gccggcgtcc ccctcggcgc cgacggcggc gacggcgtcc
     1321 cgggccggga tcagccggtc gtagaacggc agtccgagcc gggcggccac cgccggggcg
     1381 atgagggagc cggaagcgcc gtagctggcc gacacggtga ccacgcgggc cgggcccgcc
     1441 cccgccttgc cgcttcgcgc cactgccgtc tccggatcgc cgcccgacgc cggcccacgc
     1501 tatccggccg gccgacgggc gaccgtcagc gctgcccgtc ccgccggtcg cgcagctgct
     1561 cgacgacgcg cttgatctgg gccagctcgt cgagcccgtc ggagctcgat tcgtaccagg
     1621 ggagatagag gcagcggtcg tcggccatgc cctccctatc ggcccgccgg gccgccggct
     1681 gaaggccgcc cgccgcccgc cccggtagtg tccgccgcca tggtcgacat cgtcctgcgg
     1741 tcggagctcg tcgacgagat cctcgagccc cacgagaagg gcctcgggct ttcctacctg
     1801 ggctaccgca accactgcct gcggatgctc aacatcgggc ggtacctggt gcccgacgag
     1861 cccgggcgcg acgaccggct ggcggtcatg gccgccttcc acgacctccc gttcttcctc
     1921 gacggcgacc tcgactacct cggacgggcg tcggcctggg ccggcgactg gctggccgcc
     1981 accggccggg ccgagtggga gccggagatc cggctgatga tccacaacca ccacaaggtg
     2041 cggccctaca ccgggccctc ggcgccgatg gtggaggcga tgcgcaaggc cgactggatc
     2101 gacgtcagct tcaccagagt ccgcttcggg atcgaccgcg gcttcatccg cgacgtccgg
     2161 gccgccttcc ccatcaacga ggcctacaaa gggatcgcgc tgccggccat cgcccgttac
     2221 gccttcagtc acctctcacg gccgcttcct atgatgcgct ggtgactgag agggccgcca
     2281 cccggctgat cgtgccgggc gccgtgttcg ccctcggcct cggcggcttc ctgttcctgc
     2341 ccggctacct cctcgacgtc ggctgcaccg ccatgtggat gggcctcgtc ggcttggccc
     2401 tgtacctgcc gatggcggcg ctgcgggaac tgccgctcaa cgccgccgct ctcaccgggc
     2461 tggccgccta cctcttcgcc ttcgtggccc acgacggggg agccggccac tggctgctcg
     2521 gcctggcggt ggccatcggc ctcatcaccg ccgcctcggc gctgtcgggc ctcgggtcgc
     2581 tggccgtcac cgggctgtac ttcacggtgg tctcgctcgt cgtgcaggtg ggcatcgaga
     2641 agacggtgtt ctccatcggc gcgctcaccg gcggcgccgc cggccggggc gtggcccagc
     2701 ccgacctcca cggctggttc gacaccggcc gggccgtcta cctcgtcgcc gccctcgtct
     2761 gcctcgcggt cagcggcgcg gtctggtacg tcaagcagac ccggctggtg tcgatgtggg
     2821 tgctcaccgg ccatcagccg gagggggcgg acgccgtcgg gctgcgccgg cccgtccaca
     2881 aggtggtggt cttcgccctc tcgggcctga tggtcggcat cgccggctgc ctggcggcct
     2941 tcgtcaacgg cacgccgccg ccggtgatcc agttcggcat catctggtcg atcatcctgc
     3001 tggccatccc gctggcgtcc ggcatgcgga cggtgtcgtc cgtctggctg gtggccgctg
     3061 gtttcacggt catcccccag ctgctggagt cgcaccacat caaccccaac ctgctctcgg
     3121 gggggat
//
LOCUS       DATGJT010000537         3327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_797783, whole genome shotgun sequence.
ACCESSION   DATGJT010000537 DATGJT010000000
VERSION     DATGJT010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_797783"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1506)
                     /locus_tag="VKX24_09250"
     CDS             complement(67..1506)
                     /locus_tag="VKX24_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08712.1"
                     /translation="MQWDHEKPKNRLREQEEQLREYVAHHLYPYSPYYRRKFDGAGIA
                     PRNIASFDDLAKLEPTRWSDVSAEPVAFVLRPTERAIIRFGERKLVSAITRAKFRGKV
                     SQVNRDLIDPSYKPIHWHFDGDVPVGYSSEDVERLCEAGRRVLHLAGLTRDDAIVDVT
                     PPGPSLEFWQVVDGARSAGLSAVHFGSGVAGERIAAAAPTVLAGPPDAIEGALEALRA
                     GGHRVEGLRTLLVLGSLLDDPDREALRQRGQEVGEDDLEVVLSWAPAGVRTMWGECRG
                     GHYFHTYPDFEWLEVLPDGEVAWTSLVWHGTVFARLRTGVSGTLEDVACENCGRIGPR
                     LSVSSASSARRPMATWALAGTAVPAAAEGISVGAPTPSPAMFGRPPSADEEEEDEEGE
                     VQVLVPIDTDVLGVLDEHPGVAAWQAEYRRVDGTDELIVFVAPAGVDRLGPLFRELDL
                     TLSATQYVVQRPEQIAERRRRDGAVVDRR"
     gene            1579..1746
                     /locus_tag="VKX24_09255"
     CDS             1579..1746
                     /locus_tag="VKX24_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08713.1"
                     /translation="MTTQLRLIDGGDRRPWRLDSRTRAIGRRGVALARQELERARPSV
                     PDRPLEQRRAG"
     gene            1794..2015
                     /locus_tag="VKX24_09260"
     CDS             1794..2015
                     /locus_tag="VKX24_09260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08714.1"
                     /translation="MAGWGDDPELEELRHLIYEDGWEPIRATIGTGPQAADTVVVRKG
                     EETKSITSDHIAFHRFVEGLREDNPNLPL"
     gene            complement(2043..>3327)
                     /locus_tag="VKX24_09265"
     CDS             complement(2043..>3327)
                     /locus_tag="VKX24_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009708410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLJ08715.1"
                     /translation="RAEGEVGRTGVAIDSLADMELLLGGIPLDRVSTSMTINAPAALL
                     LLLYELVAEEQGVPGARLGGTIQNDILKEYVARGTYIFPPRPSMRIITDIFAYCRENL
                     PSWNTISISGYHIREAGSTAVQEIAFTLSNGIAYVQAAIDAGLSVDEFAPRLSFFFNA
                     HNDFFEEVAKFRAARRMWYRIMTERFGAEDERSRLLRFHTQTGGSTLTAQQPENNVAR
                     VTLQALAAVLGGTQSLHTNSFDEALGLPTERAAKIALRTQQIIGFESGVTETADPLGG
                     SYFVESLTDEVEAAAWRYIEKIDELGGSVAAIEAGFMQDEIERASYEWTKAVDEGRKV
                     IVGVNRFTEDEALPAEVFPIDPALERNQAQRLAELRARRDNAAVKTALEDVRAAARGT
                     QNLLVPMREALKRLATLGEVSNVLREEFGEYRPGG"
BASE COUNT          472 a         1215 c         1176 g          464 t
ORIGIN      
        1 cgcggcggga tgcccggagg gcaggggccc gccgccggag gcaacgctga ggcggcgcca
       61 gccgactcag cgacggtcga cgacggcccc gtcccggcgg cggcgctcgg cgatctgctc
      121 ggggcgctgc acgacgtact gcgtggccga cagggtcagg tcgagctccc ggaagagcgg
      181 cccgagccgg tcgacaccgg ccggagcgac gaagacgatc agctcgtcgg tgccgtccac
      241 ccggcggtac tcggcctgcc aggcggcgac gccggggtgc tcgtcgagca cgccgaggac
      301 gtcggtgtcg atggggacga ggacctgcac ctcgccctct tcatcttcct cctcctcgtc
      361 ggccgagggc ggtcgcccga acatcgccgg cgagggggtc ggtgccccca ccgagatccc
      421 ctccgccgcc gccggcacgg ccgttcccgc cagcgcccag gtggccatcg gacgccgggc
      481 gctggacgcc gacgacaccg acagccgggg cccgatccgg ccgcagttct cgcaggcgac
      541 gtcttcgagg gtgcccgaca cgcccgtccg cagccgggcg aagacggtgc cgtgccagac
      601 cagcgacgtc caggcgacct cgccgtccgg gagcacctcg agccactcga agtccggata
      661 ggtgtggaag tagtgcccgc cccggcattc cccccacatc gtccgcaccc cggccggtgc
      721 ccacgagagc acgacctcga ggtcgtcctc gccgacctcc tggccccgct gccgcagcgc
      781 ctcccggtcg gggtcatcga gcagcgaacc gagcaccagc agcgtgcgga ggccctcgac
      841 gcggtgcccg ccggcccgga gcgcctccag cgccccctcg atggcgtcgg ggggaccggc
      901 cagcaccgtc ggcgccgccg ccgcgatgcg ctcgcccgcc acccccgagc cgaagtggac
      961 ggccgacagg ccggcggagc gggcgccgtc gacgacctgc cagaactcca gcgaggggcc
     1021 gggcggcgtg acgtcgacga tggcgtcgtc gcgggtgagc ccggccagat ggagcacgcg
     1081 ccggccggcc tcgcagagcc gctcgacgtc ctccgaggag tacccgaccg ggacgtcgcc
     1141 gtcgaaatgc cagtggatcg gcttgtagga cgggtcgatc aggtcccggt tgacctgcga
     1201 caccttgccc cggaacttgg cccgggtgat ggccgagacg agcttgcgct ccccgaagcg
     1261 gatgatggcc cgctccgtcg gccggagcac gaaggccacg ggctcggcgc tgacgtcgct
     1321 ccaccgggtc ggctccagct tggccaggtc gtcgaagctg gcgatgttgc ggggggcgat
     1381 gccggcgccg tcgaacttgc gccggtagta cggggaatag gggtagaggt ggtgggcgac
     1441 gtactcccgg agctgttctt cctgctcccg cagccggttc ttcggcttct cgtgatccca
     1501 ctgcacaggc gccacgttag ccaagccctg ctccgggacc ccgtcataac tgtcacaccc
     1561 gctggggata ctcctctcat gaccactcag ctgcgactga tcgacggcgg cgaccgccgc
     1621 ccctggcgcc tcgattcccg cacccgggcc atcggccgac gtggcgtggc cctcgcccgc
     1681 caggagctgg agcgggcccg gccgtcggtc cccgaccgcc cgctggagca gcgccgcgcc
     1741 ggctgaatgg ctttaaggtt ccgcccggca gggagacgaa ggaggggcac cgcatggccg
     1801 ggtggggaga cgacccggag ctcgaggagc tccggcacct gatctacgag gacgggtggg
     1861 agcccatccg ggcgacgatc ggcaccgggc cccaggcggc cgacacggtc gtcgtccgca
     1921 agggcgagga gacgaagtcg atcacgtccg accacatcgc cttccaccgc ttcgtggaag
     1981 gcctccggga ggacaacccg aacctcccgc tgtagcgccc ccggttgaga ccgggcggcg
     2041 ggtcagccgc cggggcggta ttcgccgaac tcctcgcgca ggacgttgct cacctcgccg
     2101 agggtggcca ggcgcttcag ggcctcccgc atcggtacga ggaggttctg ggtgccccgg
     2161 gccgcggccc gcacgtcctc cagcgcggtc ttcaccgcgg cgttgtcccg ccgggcccgc
     2221 agctccgcca ggcgctgcgc ctggttgcgc tccaacgccg ggtcgatcgg gaagacctcg
     2281 gccggcagcg cctcgtcctc cgtgaagcgg ttcacgccga cgatgacctt ccgaccctcg
     2341 tcgacggcct tggtccactc gtaggaggcc cgctcgatct cgtcctgcat gaagccggcc
     2401 tcgatggccg ccaccgaccc gccgagctcg tcgatcttct cgatgtagcg ccaggccgcc
     2461 gcctccacct cgtcggtcag gctctcgacg aagtacgacc cgcccagcgg atcggccgtc
     2521 tcggtcacgc ccgactcgaa cccgatgatc tgctgcgtcc gcagggcgat cttggccgcc
     2581 cgctccgtcg gcaggccgag ggcctcgtcg aagctgttgg tgtgcagcga ctgggtgccg
     2641 cccaacacgg cggccagcgc ctggagcgtg acccgggcaa cgttgttctc cggctgctgg
     2701 gccgtgagtg tcgagccgcc ggtctgggtg tggaaccgca ggagcctgga gcgctcgtcc
     2761 tcggcgccga agcgctcggt catgatccgg taccacatcc gccgggcggc ccggaacttg
     2821 gccacctcct cgaagaagtc gttgtgggcg ttgaagaaga acgacagccg gggggcgaac
     2881 tcgtcgaccg acaggccggc gtcgatggcc gcctgcacgt aggcgatccc gttggacagc
     2941 gtgaaggcga tctcctggac ggccgtcgaa ccggcctccc ggatgtggta gccggagatc
     3001 gagatggtgt tccagctggg caggttctcc cggcagtagg cgaagatgtc ggtgatgatc
     3061 cgcatcgacg gccggggcgg gaagatgtag gtcccccggg ccacgtactc cttcaggatg
     3121 tcgttctgta tggtgccccc cagcctggct cccggcacgc cctgctcctc ggccaccagc
     3181 tcgtagagga gcagcagcag cgccgcggga gcgttgatcg tcatcgaggt cgagacgcgg
     3241 tcgagcggga tcccgccgag caggagctcc atgtccgcga gcgagtcgat cgccacgccc
     3301 gtccggccga cctcgccttc ggccctg
//
LOCUS       DATGJT010000538         2474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_901192, whole genome shotgun sequence.
ACCESSION   DATGJT010000538 DATGJT010000000
VERSION     DATGJT010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901192"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VKX24_09270"
     CDS             complement(<1..336)
                     /locus_tag="VKX24_09270"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance CopC family protein"
                     /protein_id="HLJ08716.1"
                     /translation="MSSRPLRLRLLLAVVLGAGVVLGFAAPAFAHAQLTSTEPVGGTA
                     VATSPPRVVVHFGENVEIPLGSIRVFASPSGKQIETGAAEHPDGQGNSVAVKLPKLDK
                     GTYIVTWRVT"
     gene            620..1141
                     /locus_tag="VKX24_09275"
     CDS             620..1141
                     /locus_tag="VKX24_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015619370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ08717.1"
                     /translation="MPGSDELTELLLAAQEGDRLALSAWIRRSQAEVWRLCAQLVSRD
                     QADDVTQEVFLRAYRALPAFRGDASARTWLLSIARRTCADAVRDLRRRRRLAARFERP
                     AYEPDPARAVSVEALLAGLDAERRLAFVLTQVLGLSYLEAAEICGCPVGTIRSRVARA
                     RADLVERLGEATV"
     gene            complement(1138..1812)
                     /locus_tag="VKX24_09280"
     CDS             complement(1138..1812)
                     /locus_tag="VKX24_09280"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HLJ08718.1"
                     /translation="MRVATFNVKHGENGAGRVDLRRLAAACRSLRADVLAVQEVERFA
                     RRSGFRDEMRLIARATGLRAVFGEAARRKWRSYGNVLLARGPITDVEVLKLPRPAEGE
                     PRVAIVARVTVDGVALSVAATHLSFRKGEGAAQLQLLLAALAERPGPRLVLGDLNIGP
                     DVVLPAVTAAGYTVAPTEATFPAGAPRTRLDYVAVSGLDVVSGSTPAVGTSDHLPVVA
                     ELRAST"
     gene            complement(1827..2246)
                     /gene="arfB"
                     /locus_tag="VKX24_09285"
     CDS             complement(1827..2246)
                     /gene="arfB"
                     /locus_tag="VKX24_09285"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007571574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HLJ08719.1"
                     /translation="MDGERQVLRVTPTCVVPLDELQWRFSASGGPGGQHVNTSNTRAE
                     VRFDVAGSPSLGPRQRARLLDRLGPEVRVVASDERSQLRNRELALERLRSRLAEALRV
                     ETPRRATKPTKAARERRLEEKRHRSETKARRRGRPEE"
     gene            complement(2260..>2474)
                     /locus_tag="VKX24_09290"
     CDS             complement(2260..>2474)
                     /locus_tag="VKX24_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="ATP-dependent carboxylate-amine ligase; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxylate--amine ligase"
                     /protein_id="HLJ08720.1"
                     /translation="APLREVIPELVEELTPVARRLGCEGELCYARRILEHGPSYVRQR
                     RWVSAGATLTDVVDRLIRELRTDEPG"
BASE COUNT          313 a          967 c          880 g          314 t
ORIGIN      
        1 cgtcacccgc caggtcacga tgtaggtgcc cttgtcgagc ttcggcagct tcaccgccac
       61 cgagttgccc tgcccgtcgg ggtgctcggc ggcgccggtc tcgatctgct tgcccgacgg
      121 cgaggcgaac acccggatcg accccagcgg gatctcgacg ttctcgccaa agtggaccac
      181 gacccggggc ggcgacgtcg ccaccgccgt gccgcccacc ggctcggtgg acgtcagctg
      241 ggcgtgggcg aaggccgggg cggcgaagcc cagcaccacg ccggcgccga gcaccaccgc
      301 gaggagcagc cgcagtcgga ggggtcgcga gctcacgcgg agatgtagtc gccgtttgtc
      361 agcggaaagt tcccgatcac tgccaaaacg ttaggcgcgt ccgggtccga gatacttaca
      421 agggccgtcg cgccccgccc gtccaccggc gggcagactc ccgttgccga cccgaggggg
      481 agggagccgg ggcggggagc caagggtagg ggctgtgccg gtggggcgga cgggcgggac
      541 gctcaggtcc tttccatcgc acactggtag tcatgtggtt ggctttcgaa gttcccggcc
      601 cgtagaagaa agaaccgacg tgcccggctc cgacgagctc accgagctcc tcctcgccgc
      661 tcaggaaggc gaccgcctcg cgctctccgc ctggatcagg cgcagccagg ccgaggtgtg
      721 gcggctgtgc gcgcagctcg tcagccgcga ccaggccgac gacgtgaccc aggaggtgtt
      781 cctccgggcc taccgggcgc tgcccgcctt ccggggcgac gccagcgccc gcacctggct
      841 gctgtcgatc gcccgccgca cctgcgccga cgccgtgcgc gacctccgcc gccggcgccg
      901 gctggccgcc cggttcgaac gccccgccta cgagcccgac cccgcccggg cggtgtcggt
      961 ggaggccctc ctcgccgggc tcgacgccga gcggcgcctg gccttcgtcc tcacccaggt
     1021 cctcggtctg tcctatctgg aagcggccga gatctgcgga tgccccgtgg gcacgatccg
     1081 ctcccgggtg gcccgggccc gggccgacct cgtcgaacgc ctcggcgagg ccactgtcta
     1141 ggtcgaggcc cggagctcgg ccaccaccgg caggtggtcg ctggtcccga ccgccggcgt
     1201 ggagcccgac accacgtcga ggcccgagac ggccacgtag tcgagcctcg tccgcggcgc
     1261 cccggccggg aacgtcgcct ccgtcggggc caccgtgtac ccggcggcgg tcaccgccgg
     1321 caggaccacg tcgggcccga tgttgaggtc gccgagcacc aggcggggcc cgggccgctc
     1381 ggccagcgcc gccagcagca gctgcagctg ggccgctccc tcgcccttac ggaacgacag
     1441 gtgcgtcgcc gccaccgaga gggcgacgcc gtcgacggtg acccgggcca cgatggccac
     1501 ccggggctcg ccctccgccg gccggggcag cttcagcacc tccacgtcgg tgatggggcc
     1561 ccgggccagg aggacgttgc cgtagctccg ccacttgcgc cgggccgcct cgccgaacac
     1621 ggcccgcagc ccggtggccc gggcgatcag ccgcatctcg tcccggaacc cgctgcggcg
     1681 ggcgaagcgc tcgacctcct ggacggccag cacgtcggcc cggagcgacc ggcaggccgc
     1741 ggccagccgc cggaggtcga cccggccggc gccgttctcg ccgtgcttga cgttgaaggt
     1801 ggcaacccgc atcgacccgt cggacgtcat tcttccggac ggccccggcg ccgggccttc
     1861 gtctccgagc ggtgccgctt ctcctccagg cgccgctccc gggcggcctt ggtcggcttc
     1921 gtcgcccggc gcggcgtctc cacccgcagc gcctcggcga gccgcgaccg cagccgctcc
     1981 agcgccagct cccggttgcg gagctgggag cgctcatcgg aggccaccac ccggacctcg
     2041 ggcccgagcc ggtccagcag ccgggcccgc tgccgggggc cgagcgacgg ggagccggcc
     2101 acgtcgaagc ggacctcggc ccgggtgttg gacgtgttca cgtgctggcc ccccggccct
     2161 ccgctggccg agaagcgcca ctggagctcg tcgagcggca ccacgcacgt cggcgtgacc
     2221 cgcagcacct ggcgttcccc gtccatcgga acggcgacgc tacccgggct cgtcggtgcg
     2281 cagctcccgg atcagtcggt cgaccacgtc ggtcagcgtc gccccggccg agacccaccg
     2341 gcgctggcgg acgtagctcg gcccgtgctc caggattcgc cgggcgtagc agagctcccc
     2401 ctcgcagccc agccgccggg ccaccggggt gagctcctcg accagttcgg ggatcacctc
     2461 ccgcagcggc gcca
//
LOCUS       DATGJT010000539         2867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_278222, whole genome shotgun sequence.
ACCESSION   DATGJT010000539 DATGJT010000000
VERSION     DATGJT010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278222"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..2124
                     /locus_tag="VKX24_09295"
     CDS             88..2124
                     /locus_tag="VKX24_09295"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF014553.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase"
                     /protein_id="HLJ08721.1"
                     /translation="MSSVSGRSSYLDEDAGSIDSAARRLALAEDADGPPAERLRVLAD
                     VGRFLDEFFQLTGAQLRAAAAVPGRGEGVRSRVEWLLTRQSAALERLGPGLRRVGIEL
                     CHWADLGDDERRSAAAIFEDRLRPVLVPLVAEPGKPLPPPANLSVNLAAVVRDADGRG
                     HLGLVEVPPVVPRFLRLPAEAFDQPVRLIPVEDVVEAHLGALFPEARVEGSAAFRVTR
                     QAGIVANPDAEDLLRSVERQLRLGRHGTAVRLEVQRHTPAAVVDRLTAELDLGPGEVY
                     ATGGLLGTADLASLPLVGADPSGVRAMAARRPVPPPAAIGAGFAARRPGDVFDVLDRG
                     DVLVHFPYESYADSVVALLDRAAADPSLLAIKQTLYRASPDGPTVRALVRAAERRAHV
                     VAVVELTARLDERNSVACARALEKAGAHVVYGLVGLRTHCPLTLVIRGGGDRVSRYGV
                     VGTGLHHPLRRPEGMSLLSAAPGITADLADVFNYLTGYSRPARFRRLLVGPGHLRSRL
                     LDLIRRETAAGPAGRIALKVYRLVDREVIDALYRAAQRGVRVDLVVTGACALRPGVPG
                     LSEGIRVVAPLGRHFETSRLFGFGAGETSSWYLSSGDLALAHLDRQIDVAVPVDHPAQ
                     RDRLEAMVDALLRLPAWEMDADGSWHRRGPGAEGALRALAMSAGTLGGTGVSLR"
     gene            2124..>2867
                     /locus_tag="VKX24_09300"
     CDS             2124..>2867
                     /locus_tag="VKX24_09300"
                     /inference="COORDINATES: protein motif:HMM:NF014038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HLJ08722.1"
                     /translation="MAKTEREVKLAAWGGFVLPALDDLGPDVSVEPLKAKKLDATYYD
                     TRDLRLARAGVSLRHRVGDDPPWTVKLPDDDSGPAMSRREITFAGPAGTIPAPAAALV
                     RAYARGEPLVPVARLKTERSRLALSVDGRAVAEIADDEVSVYHGRRLASRFREIEVEV
                     EDEAPGGLLPAVVKRLRAAGAGAPDKTPKVVRALGPRALEPLPGAVVAVGADSTVGDV
                     VQAAIANALARIVAHDPGVRLGDDAEDVHQ"
BASE COUNT          315 a         1093 c         1069 g          390 t
ORIGIN      
        1 catttctcgg acagctaacg agtcctaacg ttgtcggcga tggctttcca gtccccggtc
       61 gcctcggtcg ttgccgtacg ccgcgccatg agctctgtct ccggccgttc cagctacctc
      121 gatgaggacg ccggcagcat cgacagcgcc gcccgccggc tggcgctggc cgaggacgcc
      181 gacgggccgc cggccgagcg cctgcgcgtg ctggccgacg tcggccggtt cctcgacgag
      241 ttctttcagc tgaccggcgc ccagctccgg gcggcggcgg cggtgcccgg ccggggcgag
      301 ggcgtgcgca gccgggtgga gtggctcctc acccgccaga gcgcggcgct ggagcggctg
      361 gggccgggcc tgcggcgggt ggggatcgag ctgtgccact gggccgacct cggcgacgac
      421 gagcggcggt cggcggcggc gatcttcgag gaccggctcc gtccggtgct cgtcccgctg
      481 gtggccgagc cggggaagcc gttgccgccg ccggccaacc tctccgtcaa cctggcggcc
      541 gtcgtccgcg acgccgatgg gcggggccac ctcggcctgg tggaggtgcc gccggtcgtc
      601 ccccggttcc tgcggctgcc ggcggaggct ttcgaccaac ccgtccgcct catcccggtg
      661 gaggacgtcg tcgaggcgca cctcggcgcc ctgttccccg aggcccgggt cgaagggtcc
      721 gcagccttcc gcgtcacccg gcaggccggg atcgtcgcca accccgacgc cgaggacctg
      781 ttgaggtcgg tcgaacgcca gctccggctg ggccgccacg gcaccgccgt ccgcctcgag
      841 gtgcagcgcc acacgccggc ggcggtggtc gaccggctga ccgccgaact cgacctgggg
      901 ccgggcgagg tctacgccac cggcgggctg ctgggcaccg ccgatctggc ttcgctccct
      961 ctggtcgggg ccgatccatc cggggtccgg gcgatggccg cccgccggcc ggtgccgccg
     1021 ccggcggcga tcggggcggg gttcgccgcc cgccggccgg gtgacgtctt cgacgtcctc
     1081 gaccggggcg acgtcctcgt ccacttcccc tacgagtcgt acgccgattc cgtggtggcg
     1141 ctcctggacc gggcggcggc cgacccctcg ctgctggcca tcaagcagac gctgtaccgg
     1201 gcgtcgcccg acgggccgac cgtgcgggcg ctggtccggg cggccgagcg gcgggcccac
     1261 gtcgtggccg tggtggagct gacggccagg ctcgacgagc ggaacagcgt cgcctgcgcc
     1321 cgggcgctgg agaaggccgg cgcccatgtc gtctacggcc tcgtcggcct ccggacccac
     1381 tgtccgctga cgctggtgat ccggggcggc ggcgaccgcg tgtcccgcta cggcgtggtc
     1441 ggcaccggcc tgcaccaccc gcttcgccgg cccgaaggaa tgtcgctgct gtcggccgcc
     1501 cccggaatca ccgccgacct cgccgacgtc ttcaactacc tgaccggcta cagccgcccg
     1561 gcccgcttcc gccggctgct ggtcgggccc ggccaccttc gcagccgcct cctcgacctc
     1621 atccggcggg agacggcggc cgggccggcc gggcgcatcg ccctcaaggt ctaccgcctc
     1681 gtcgaccggg aggtcatcga cgccctctac cgggcggccc agcgcggcgt ccgcgtcgac
     1741 ctcgtcgtca caggggcctg cgccctgcgc cccggcgtgc ccggcctctc ggaagggatc
     1801 cgggtcgttg cgccgttggg ccggcacttc gagacgtcgc ggctgttcgg cttcggcgcc
     1861 ggggagacga gttcgtggta cctctcctcc ggcgatctcg ccctggccca tctcgaccgg
     1921 cagatcgacg tcgccgtccc cgtcgaccat ccggcgcagc gggaccggct cgaggcgatg
     1981 gtcgacgcgc tgctccgcct ccccgcctgg gagatggacg ccgacggcag ctggcaccgc
     2041 cgcggtcccg gcgccgaagg cgcgctgcgg gccttggcga tgtcggccgg gacgctgggc
     2101 ggaacgggcg ttagcctgcg ctgatggcca agacggaacg cgaggtgaag ctggcggcct
     2161 ggggcggctt cgtcctgccg gcgctcgacg acctcggccc cgacgtcagc gtcgaaccgc
     2221 tcaaggcgaa gaagctcgac gccacctatt acgacaccag ggatctccgc ctggcccggg
     2281 ccggcgtcag cctccggcac cgggtcggcg acgacccgcc gtggacggtg aagctgcccg
     2341 acgacgactc cgggccggcc atgagccggc gggagattac cttcgccggc ccggccggca
     2401 cgatcccggc gccggcggcg gcactggtgc gggcctacgc ccggggtgag ccgctggtgc
     2461 cggtcgcccg cttgaagacc gagcggtccc ggctggcgct ctcggtcgac ggccgagccg
     2521 tggcggagat cgccgacgac gaggtgtcgg tgtaccacgg ccgtcgcctg gcgtcgcgct
     2581 tccgggagat cgaggtcgag gtggaggacg aggcgcccgg cggactcctg cccgccgtcg
     2641 tcaaacggct ccgggccgcg ggggccggcg cgcccgacaa gacgcccaag gtggtgcggg
     2701 ccctcggccc ccgggcgctc gagccgctcc cgggggcggt cgtcgccgta ggcgccgact
     2761 ccaccgtcgg cgacgtcgtg caggcggcga tcgccaatgc cctggcccgg atcgtggccc
     2821 acgatcccgg cgtccgcctc ggcgacgacg ccgaggacgt ccaccag
//
LOCUS       DATGJT010000540         4564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_901444, whole genome shotgun sequence.
ACCESSION   DATGJT010000540 DATGJT010000000
VERSION     DATGJT010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4564
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901444"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VKX24_09305"
     CDS             complement(<1..664)
                     /locus_tag="VKX24_09305"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006538075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ08723.1"
                     /translation="MAHGIPAETIEAGRAGPGPATRPSASPPPARPADSRPGQGTAAL
                     LQPLIAALLGPSPSVRFVFWDGTTCGPSDAPGSVRVVSPAALRRLLWAPGQLGLARAY
                     VAGELDFEGDLFALLGALRDVAPADLRFGAQVVPAVVRAAARLGVVGRPPEPPPEEHR
                     PRGRRHSLRRDARSISHHYDVSGEFYRIVLGPAMTYSCARFVDRHTTLAEAQEAKHEL
                     ICR"
     gene            complement(686..1165)
                     /locus_tag="VKX24_09310"
     CDS             complement(686..1165)
                     /locus_tag="VKX24_09310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004992452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HLJ08724.1"
                     /translation="MIGSPADQPPADRPAPDRPTRLVPETSDPDTGGFFAAAAREELA
                     VCACAACGAVLHPPRAYCAACGGWDTVWRTVAGRGRLYSWTTVEHQTHRAFPVPYTIV
                     LVELDDAPGTRLVGHLPDRPELEAGMPMRVWFEPVDDDGTLLPQWRPDSTNAAVDGG"
     gene            complement(1162..2403)
                     /locus_tag="VKX24_09315"
     CDS             complement(1162..2403)
                     /locus_tag="VKX24_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007532276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-transfer protein"
                     /protein_id="HLJ08725.1"
                     /translation="MTPAGLRDGITVAGHRDRCAISGIGATGFSSNSGRSTLSLAVEA
                     SLAAVADAGLRPSDVDGVVRCDMDAVAHNDLAEALGLPDVTYWGSSGPGGAAPGGMIG
                     QAVGAVLSGQATTVLAFRSLNGRSGARFGRSGAVGSGGGGGAGWRPRAGGRGTYDEFF
                     FPYGLVAPGQLFSLLARRHMIEFGTTGEQLGHIALACRARANANPAAQMADRPLTMED
                     YLSARMISSPLRLFDYCLETDGACAVVVTSAARAADGPQPPALIRAVAQSAGPEPQLG
                     FLFPTLLRDSLTTQTSKSVAGVLYRRAGLGPGDVDVAQFYDCFTITVLLQLEDYGFCA
                     KGEGGPFAASGAIDKGGSLPINTSGGHLSEGYIHGLNHIVEGVRQIRGTSTSQVPGAE
                     VCLVTSGLPVTSSALVLRRAS"
     gene            complement(2413..3207)
                     /locus_tag="VKX24_09320"
     CDS             complement(2413..3207)
                     /locus_tag="VKX24_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018653163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylpyruvate isomerase family
                     mycothiol-dependent enzyme"
                     /protein_id="HLJ08726.1"
                     /translation="MQLTDAMDEVLSGLSAQDDELDGLVAGLDDDGWATPSRCPGWSV
                     ADVVLHVAQTDEMAAASAEERFTADAVRFGVKASDVPAGATVDDLAGLAVAAQRAPGA
                     VVYSRWRAAAAAQAKALAACEPGRRLQWVAGEMSALTLATTRLAEVWIHTGDVAAGLG
                     RDRRPTAALRPIARLAWRTLPYAFSRAGRTLSGPVALALTAPDGSLWEFTPDGPASAT
                     APSTVVTGPALDFCLVAARRVPASATALRATGPDGDAVLELVRTFA"
     gene            3263..>4564
                     /gene="asnB"
                     /locus_tag="VKX24_09325"
     CDS             3263..>4564
                     /gene="asnB"
                     /locus_tag="VKX24_09325"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014143399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HLJ08727.1"
                     /translation="MCGITGWVDFERDLTGERPTLEAMVRTMACRGPDASGLWTSPHA
                     ALGHRRLAVIDIEGGKQPMTAEDGGRTVAAMTYSGEAYNFRELRAELANAGVRFSTQS
                     DTEVVLRAYLAWGDDFVDRLNGMFAFAIWDTRREELLLVRDRLGIKPLFYAPTPHGVL
                     FGSEPKAILAHPEFEGVVTLDGFRELLAMTKTPEMSPYAGMYEVRPGQVVTVGRNGVG
                     KRRYWQLEAIPHTDDLDTTVGTIRDLLLDTINRQLISDVPLCTLLSGGLDSSTVTAMA
                     ADALRRTGEGPVRSFAVDFVGYEKDFVADVIRPTPDTPFAHDLARHVGADHQDIILST
                     ADLMDPANLGEVVTSFDFPVNWGDGFTSLLLLFRAIRAQTTVALSGESADEVFGGYAW
                     FHDPDSVNADVFPWMAGTKMRMAEPTLLDPGLRQRLDLEEYR"
BASE COUNT          619 a         1671 c         1723 g          551 t
ORIGIN      
        1 tgcggcagat cagctcgtgc ttggcctcct gggcctcggc cagcgtggtg tgccggtcga
       61 cgaagcgggc gcaggagtac gtcatcgccg ggccgagcac gatccggtag aactcgccgc
      121 tgacgtcgta gtggtggctg atcgaccggg cgtcgcgccg cagggagtgc cgccggcccc
      181 ggggccggtg ctcctcgggc ggcggctccg gcggccggcc gacgacgccg agccgggcgg
      241 cggcccggac cacggcgggt acgacctggg ccccgaaccg gaggtcggcc ggggcgacgt
      301 cgcgcagggc gccgagcaac gcgaacaggt cgccctcgaa gtcgagttcg ccggccacgt
      361 aggcccgggc caggccgagc tgccccggcg cccacagcag ccgccggagt gcggccggcg
      421 agacgacccg cacggagccg ggggcgtcgg acggcccgca ggtggtcccg tcccagaaca
      481 cgaaccgcac cgagggcgac gggccgagca gggcggcgat gagcggctgg aggagcgcgg
      541 ccgttccctg ccccggccgg ctgtccgccg gacgggcggg tgggggactc gccgacggcc
      601 gggtggccgg tccggggccg gcccggcccg cctcgatcgt ctctgcaggg atcccgtgcg
      661 ccaccggtgg tggaactaac cagagtcagc cgccgtcaac cgccgcattc gtcgagtccg
      721 gccgccattg cggcaggagc gtgccgtcgt cgtcgaccgg ttcgaaccag acccgcatcg
      781 gcatgcccgc ctcgagctcc ggacggtccg gcaggtggcc gaccagccgg gtcccggggg
      841 cgtcgtcgag ctccaccagc acgatggtgt aggggacggg gaaggcccgg tgggtctggt
      901 gctccacggt cgtccaggag tagaggcggc cccggcccgc caccgtccgc cacacggtgt
      961 cccagccgcc gcacgccgcg cagtaggccc ggggcgggtg caggacggcg ccgcaggcgg
     1021 cgcaggcgca gacggccagt tcctcccggg cggcggcggc gaagaagccg ccggtgtcgg
     1081 ggtcggaggt ctccgggacg agccgcgtcg gccggtccgg cgccggccgg tccgccggcg
     1141 gctggtccgc aggggagccg atcacgacgc ccgccgcagc acgagggcgc tggaggtcac
     1201 cggcaggccc gacgtcacca ggcacacctc ggcgcccggc acctggctgg tcgacgtgcc
     1261 ccggatctgg cggacgcctt ccacgatgtg gttgagcccg tggatgtagc cctcggacag
     1321 gtggcccccc gacgtgttga tcggcagcga cccgcccttg tcgatggcgc cgctggcggc
     1381 gaacgggccg ccctccccct tggcgcagaa gccgtagtcc tcgagctgca gcagcacggt
     1441 gatcgtgaag cagtcgtaga actgggcgac gtcgacgtcg cccgggccga ggccggcccg
     1501 ccggtagagg acgccggcca cggacttcga cgtctgggtg gtgaggctgt cccgcagcag
     1561 cgtggggaag aggaagccga gctgcggctc cgggccggcg ctctgggcca ccgcccggat
     1621 gagcgccggc ggctgcgggc cgtcggccgc ccgtgcggcg ctggtcacca ccacggcgca
     1681 ggcgccgtcg gtctccaggc agtagtcgaa caggcgcaga gggctggaga tcatccgggc
     1741 cgagaggtag tcctccatcg tgagcggccg gtcggccatc tgggccgcgg gattggcgtt
     1801 ggcccgggcc cggcaggcca gggcgatgtg gccgagctgt tccccggtgg tgccgaactc
     1861 gatcatgtgc cgccgggcca ggaggctgaa cagctggccg ggggcgacga ggccgtaggg
     1921 gaagaagaac tcgtcgtagg tgccgcggcc ccccgcccgg ggccgccatc cggcaccgcc
     1981 gcccccgccg ctgccgaccg caccgctgcg gccgaagcgg gcgccggagc ggccgttgag
     2041 cgaccggaag gccagcaccg tcgtggcctg gccggagagg accgccccca ccgcctggcc
     2101 gatcatgccg ccgggcgccg cgccgcccgg gcccgacgac ccccagtacg tcacgtccgg
     2161 caggcccagc gcctccgcga ggtcgttgtg ggccacggcg tccatgtcgc agcggacgac
     2221 gccgtcgacg tcggacggac gcagcccggc atcggcgacg gccgccagcg acgcctcgac
     2281 ggccagcgac agcgtgctgc gcccggagtt ggacgagaag cccgtcgccc cgatgccgct
     2341 gatggcgcac cggtcgcggt gccccgcgac cgtgattccg tccctgagtc cggccggagt
     2401 catggcacca gttcaggcga aggtgcggac gagttccaag acggcgtcgc cgtcggggcc
     2461 ggtggcccgg agcgccgtgg ccgacgccgg gacccgccgg gcggccacca ggcagaagtc
     2521 gagcgccgga ccggtgacga cggtggacgg ggcggtggcg gacgccggcc cgtccggcgt
     2581 gaactcccac aggctcccgt cgggggcggt gagggccagg gccaccgggc ccgacagcgt
     2641 ccggcccgcc cgggagaagg cgtagggcag ggtccgccag gccaggcggg cgatcggccg
     2701 caacgccgcc gtgggccggc gatcccggcc gagcccggcg gcgacgtcac cggtgtggat
     2761 ccacacctcg gccagccggg tggtggccag cgtcagcgcc gacatctcgc cggccaccca
     2821 ctgcaggcgc cggccgggct cgcaggccgc cagcgccttg gcctgggcgg cggcggccgc
     2881 ccgccagcgg gagtagacga cggcgccggg ggcgcgctgg gcggccaccg ccagcccggc
     2941 caggtcgtcc accgtggcgc cggcggggac gtcggaggcc ttcacgccga acctcaccgc
     3001 gtcggcggtg aaccgttctt cggcgctggc cgccgccatc tcgtcggtct gggcgacatg
     3061 caggacgacg tcggcgaccg accagccggg gcagcgggac ggcgtcgccc acccgtcgtc
     3121 gtcgagcccg gccaccagcc cgtccagctc gtcgtcctgg gccgagagtc cgctgagaac
     3181 ctcgtccatc gcgtcggtaa gttgcatgaa gcgaccctat atggttggaa tggatgacgc
     3241 atccggggga aggagctagt ccatgtgcgg gatcacaggc tgggttgatt tcgagcgtga
     3301 cctgacgggg gagcggccga ccctggaggc gatggtcagg acgatggcct gccggggccc
     3361 cgacgcctcg gggctgtgga cgtcgcccca cgccgccctc gggcaccgcc gcctggcggt
     3421 gatcgacatc gagggcggca agcagccgat gaccgccgag gacggcggcc gcacggtggc
     3481 ggccatgacc tacagcggcg aggcctacaa cttccgggag ctgcgggccg agctggccaa
     3541 cgccggagtc cggttctcga cccagagcga caccgaggtc gtcctgcggg cctacctcgc
     3601 ctggggcgac gacttcgtcg accgcctcaa cggcatgttc gccttcgcca tctgggacac
     3661 ccggcgggag gagctgctcc tcgtccgcga ccggctgggc atcaagccgc tcttctacgc
     3721 cccgacgccc cacggcgtgc tgttcgggtc ggagcccaag gcgatcctcg cccacccgga
     3781 gttcgagggc gtcgtgacgc tcgacgggtt ccgggagctg ctggccatga cgaagacgcc
     3841 ggagatgtcg ccctacgccg gtatgtacga ggtccgcccc ggccaggtcg tcaccgtcgg
     3901 ccgcaacggc gtcggcaagc gccgctactg gcagctggag gccatccccc acaccgacga
     3961 cctcgacacc acggtcggga cgatccggga cctcctgctc gacaccatca accgccagct
     4021 gatctccgac gtcccgctgt gcaccctgct gtcgggcggc ctcgactcgt cgacggtcac
     4081 cgccatggcc gccgacgccc tccggcggac gggggagggc cccgtccgca gcttcgccgt
     4141 cgacttcgtc ggctacgaga aggacttcgt ggccgacgtc atccggccca cacccgacac
     4201 gcccttcgcc cacgacctgg cccgccacgt tggcgccgac caccaggaca tcatcctgtc
     4261 gacggccgac ctcatggacc ccgccaacct gggggaggtc gtgacgtcct tcgacttccc
     4321 ggtcaactgg ggcgacggct tcacctcgct gctgctgctg ttccgggcca tccgggccca
     4381 gacgacggtg gcgctgtcgg gcgagtcggc cgacgaggtc ttcgggggct acgcctggtt
     4441 ccacgacccg gactcggtca acgccgacgt cttcccctgg atggccggga cgaagatgcg
     4501 catggccgag ccgacgctgc tcgacccggg gctgcggcag cgcctcgacc tcgaggagta
     4561 ccgg
//
LOCUS       DATGJT010000541         2542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1316113, whole genome shotgun sequence.
ACCESSION   DATGJT010000541 DATGJT010000000
VERSION     DATGJT010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316113"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="VKX24_09330"
     CDS             <1..353
                     /locus_tag="VKX24_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012871733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HLJ08728.1"
                     /translation="EAQLGSAIAALAPGDLTALVIAYEPIWAIGSGRAATPVDAADAA
                     AFIRSQVGATGGEEAAAGVRVQYGGSVTAENAADFCREPDIDGLLVGGASLQAAGFAE
                     VISAVAGCYRLSAG"
     gene            405..635
                     /gene="secG"
                     /locus_tag="VKX24_09335"
     CDS             405..635
                     /gene="secG"
                     /locus_tag="VKX24_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HLJ08729.1"
                     /translation="MLTVLYVVVEIISATALVFLILMHSGKGGGLSDMFGGSMGAAAS
                     GSTVVERNLDRITVTVAIVFALTSLTLDLRLQ"
     gene            632..2461
                     /locus_tag="VKX24_09340"
     CDS             632..2461
                     /locus_tag="VKX24_09340"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter family substrate-binding
                     protein"
                     /protein_id="HLJ08730.1"
                     /translation="MSHRGRRPPGRRRVALLCVTAALGAVLAGCGGGGARPKPQDRVS
                     LAANGGTVTVGIDQAPTGCNPNTASGNTEADRLVLSLVLPSAFQIDENGVAQYDPALI
                     EAAELSSTTPETVVYTINPKAVWSDGRPITAADFVYAWQHQRAVPVVGAGGDVDVAST
                     AGYDDISTMTPSNHGRTLTVVFSTHYADWQSLFSDLLPAHVLSQVGWSPGCSTVDPAV
                     DLSGGPFKIVSASRTVVTLVRNPRWWGQPPHLARIVIKVASGPEQLAHWLFGHKVDVV
                     APSSFDAALLQDITSIPTVKSAMEISNTFLELEFDTTAGPTAAPLLRDAVAYAIDRQE
                     LSNQVAGWADVTIAPSVSHLYSQEQAAYPSTPPPVPANSTTTTTAPSPATSAGVTGAS
                     FPTAGDAVKEIREFEAAGYFRNVVGDWVDTSGRPLSLRLAVDDADRWAVATATLLGAQ
                     LRGQGIAVSTVAAQGAEAAGADLTNGEADVAVVPLHTGPFPTRTSAWYTPLLEVPGEA
                     GAQDWSGYQSLKVENLFIQAAGQLDPVTAQPLYTEIDDQLWGDMVALPLFAEPSVLAW
                     SGSVTGITPGPYWPGLFATVLDWARLVPEPAGYVGTPTIPSGG"
BASE COUNT          351 a          957 c          877 g          357 t
ORIGIN      
        1 tcgaagccca gctgggctcg gccatcgccg ctctcgcgcc cggggacctg acggccctcg
       61 tcatcgccta cgagccgatc tgggccatcg ggtccggccg ggcggcgacg ccggtggacg
      121 cggcggacgc cgccgccttc atccgatccc aggtcggggc gacgggcggg gaggaggccg
      181 cggccggcgt ccgcgtccag tacggcgggt cggtgacggc cgagaacgcc gccgacttct
      241 gccgcgagcc ggacatcgac gggctcctgg tggggggcgc gagcctccag gccgccggtt
      301 ttgccgaggt catctcggcc gtcgccggct gctaccgtct ctctgccggc tgaccgagcc
      361 gtgggaacac ggcggcggtc ccgacctgcc cgaaggagcg agcggtgctg acggtgctct
      421 acgtcgtcgt cgagatcatc tccgccacgg ccctcgtctt cctcatcctc atgcacagcg
      481 ggaagggcgg gggcctgtcc gacatgttcg ggggcagcat gggtgccgcg gcctcgggtt
      541 cgaccgtcgt ggagcggaac ctggaccgca tcacggtcac ggtcgccatc gtgttcgccc
      601 tcacctcgct cacgctggat ctccgattgc agtgagccac cgagggcgcc gcccgcccgg
      661 gcggcgccgg gtggcgctcc tgtgcgtgac ggcggcgctc ggtgccgtgc tcgccggttg
      721 cggcggggga ggggctcgcc cgaagccgca ggaccgcgtc tcgctcgcgg ccaacggcgg
      781 aacggtcacg gtcgggatcg accaggcgcc gaccggttgc aaccccaaca cggcctcggg
      841 caacaccgaa gcggaccgcc tcgtgttgag tctggtgctg ccgagcgcat tccagatcga
      901 cgagaacggc gtggcccagt acgacccggc gctcatcgag gcggccgaac tgtcctccac
      961 gacccctgag accgtcgtct acacgatcaa cccgaaagcc gtgtggtcgg acggccggcc
     1021 gatcaccgcc gccgacttcg tctacgcctg gcagcaccag cgggcggtgc cggtcgtcgg
     1081 ggccggcggc gacgtcgacg tcgccagcac cgccggctac gacgacatct cgacgatgac
     1141 cccgtccaac cacgggcgca cgctgacggt cgtcttttcg acccactacg ccgactggca
     1201 gagcctgttc tccgacctgc tcccggccca cgtcctctcg caggtggggt ggagccccgg
     1261 ctgctcgacc gtcgaccccg cggtcgacct ctccgggggg cccttcaaga tcgtgtcggc
     1321 ctccaggacg gtggtgaccc tggtgcgcaa cccgaggtgg tgggggcagc cgccgcacct
     1381 ggcccgcatc gtcatcaagg tcgcgagcgg ccccgagcag ctggcccact ggctcttcgg
     1441 ccacaaggtg gacgtcgtcg caccgagctc gttcgacgcc gcgctcctgc aggacatcac
     1501 ctccatcccc accgtcaaga gcgcgatgga gatctccaac accttcctcg agctcgagtt
     1561 cgacaccacc gccgggccga cggcggcccc gctgctgcgc gacgccgtcg cctatgccat
     1621 cgaccgccag gagctgagca accaggtggc cggctgggcc gacgtcacca ttgcgccctc
     1681 ggtcagccac ctctactccc aggagcaggc ggcgtacccc tccaccccgc caccggtccc
     1741 ggccaactcg accacgacca cgacggcgcc ctccccggcc acctctgccg gggtgaccgg
     1801 ggccagcttc ccgaccgccg gggacgcggt gaaggagatc cgggagttcg aggcggccgg
     1861 ctacttccgc aacgtcgtcg gggactgggt cgacacctcc ggacgcccgc tcagtcttcg
     1921 cctcgccgtc gacgacgccg accggtgggc ggtggcgacc gccaccctgc tgggcgcgca
     1981 gctgcggggg caggggatcg cagtcagcac ggtcgccgct cagggggccg aggccgccgg
     2041 cgccgacctc accaacgggg aggccgacgt ggccgtcgtc cccctgcaca cgggaccctt
     2101 ccccacccgc accagcgcct ggtacacgcc actgctcgag gtgcccgggg aggccggagc
     2161 ccaggactgg agcggctacc agtccctcaa ggtcgagaac ctcttcatcc aggccgccgg
     2221 gcaactcgac ccggtgaccg cccagccgct ctacaccgag atcgacgacc agctctgggg
     2281 cgacatggtt gccctcccgt tgttcgccga gccctcggtg ttggcctggt cggggtccgt
     2341 caccggaatc acgcctgggc cgtattggcc ggggctcttc gccaccgtcc tcgactgggc
     2401 ccggctcgtc cccgagccgg ccgggtacgt cgggacgccg accatcccga gcggggggta
     2461 gggccgggcg atggggccgg gaacccggca ctaaagtcgt cggacggctc gcaactggag
     2521 ccggacctat cggtcggagt gg
//
LOCUS       DATGJT010000542         3011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1420242, whole genome shotgun sequence.
ACCESSION   DATGJT010000542 DATGJT010000000
VERSION     DATGJT010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420242"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..2324
                     /locus_tag="VKX24_09345"
     CDS             3..2324
                     /locus_tag="VKX24_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019137611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HLJ08731.1"
                     /translation="MPPGFTHALLLRSGRVLAAGPLEDTVTAAALSACFDTTVTLERR
                     NGRFIALAAPAVPPPTVAAPAPPAGYPAAPRQDIVEEIHGHLVADPYRWLEDADDPAT
                     RAWSKAQDELCRPFLDGLPGRRATAARLRELSVGLVTPPAVRGDRLFLLRRRPDQEHA
                     VLAVLGPGDDPLTGGRVLIDPSALSEDDTITLDGWSPSPDGTLLAYLLSDAGTEESAL
                     RVMEVDTGADVDGPIDRCRYSSLAWTADGRALYYVRRLPPGAVPPGEEAFHRRVRFHR
                     FGADPATDDLVFGDGRDPTAYYSVDVSVDGRWLLLAEHLGTAPRNDVWIADLAGPGGH
                     RRLTAVQEGLDASTYAHVGPDGRLYLHTDLGAPRYRLAVADPERPQPEHWVDLLPEDG
                     EGVLADWCLTDDAVVAVRAHHGVSRVTVHDRRTGAAGGDIPLPGLGVASVTSRREGGS
                     EVWIGYQDFTTPPQVWYSRVDGDFWRSAGTPPVPQERRMAPAATLWATAPGSPDLPAI
                     RTEQLTYRSKDGTPVRMFVVHRADAGPSNGPHATVLYGYGGFQISQVPAYSATVAAWV
                     ERGGVWAVASIRGGSEEGEAWHRHGMREHKQRCFDDFAAAGEALVAAGWTAPERLGIY
                     GGSNGGLLVGATLTQRPELARAVVCSAPLLDMVRYERFGLGRTWNDEYGTAADPVEFG
                     WLLSYSPYHHVERGTAYPAVLFTVFDNDTRVDPLHARKLCAALQWATSRSPADAPVLL
                     RREENVGHGGRSVSRTVALAADVLGFFWELTGK"
     gene            2375..>3011
                     /locus_tag="VKX24_09350"
     CDS             2375..>3011
                     /locus_tag="VKX24_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08732.1"
                     /translation="MLKFLLRRFANYLVLIGLATCLGYFLAASSLNPRANYQGRNPPP
                     SEASINAKLDALNLNDHTPVVKRFFRWAGDFVHGNMGKTVNEQPVWDEMKRRMGVSLR
                     LLLIGSVLGAVVGVGVGVIGAVKQYSLTDHFTTAWSFVLLSTPVFLLAVLLKVAGHNY
                     WNQHTPASWHLYYVGEYTPHLDGGLWLHVRDRMAHLVLPTLGIVLGQVAFYS"
BASE COUNT          384 a         1217 c          980 g          430 t
ORIGIN      
        1 agatcccccc cggtttcacc catgccctgc tgctccgctc cggccgggtc ctggccgccg
       61 gcccgctgga ggacacggtc accgccgccg ccctgtcggc ctgcttcgac accacggtga
      121 ccctcgaacg gcgcaacggc cgcttcatcg ccctggccgc gccggccgtc cccccgccga
      181 cggtagcggc gccggcgccc cctgccggct acccggctgc cccccggcag gacatcgtcg
      241 aggagatcca cggccacctc gtggccgacc cctaccgctg gctggaggac gctgacgatc
      301 ccgccacgag agcgtggtcc aaggcccagg acgagctctg ccggccgttc ctcgacggcc
      361 tccccggccg ccgggcgacc gccgcccggc tccgggagct gtcggtcggc ctcgtgacgc
      421 cgccggccgt gcggggcgac cggctcttcc tgctccgccg ccggcccgat caggagcacg
      481 ccgtcctcgc cgtcctcggc ccgggcgacg acccgctgac cggcgggcgg gtcctgatcg
      541 accccagcgc cctgtccgag gacgacacga tcacgctcga cggctggtcc ccctcccccg
      601 acggcaccct gctggcctat ctgctgtccg acgccggcac cgaggagtcg gcgttgcggg
      661 tgatggaggt cgacaccggc gccgacgtcg acggccccat cgaccgctgc cgctacagct
      721 ccctcgcctg gaccgccgac ggccgggccc tctactacgt ccgccgcctc ccgcccggcg
      781 ccgtcccgcc cggcgaggag gccttccacc ggcgggtccg cttccaccgc ttcggcgccg
      841 accccgcgac cgacgacctc gtcttcggcg acgggcgcga ccccaccgcc tactactccg
      901 tcgacgtctc ggtcgacggc cgctggctgc tcctggccga gcacctcggc accgcccccc
      961 gcaacgacgt ctggatcgcc gacctcgccg gccccggcgg ccaccgccgg ctgacagccg
     1021 tccaggaggg cctcgacgcc tccacctacg cccacgtcgg gccggacggc cggctctacc
     1081 tccacaccga cctcggcgcc ccccgctacc ggctcgcagt ggccgatccg gagcgtcccc
     1141 aaccggagca ctgggtcgac ctactgccgg aggacggcga gggcgtcctg gccgactggt
     1201 gcctgacgga cgacgccgtc gtggccgtcc gggcccacca cggcgtgagc cgcgtcaccg
     1261 tgcacgaccg gcggacgggc gccgccggcg gcgacatccc cctccccggc ctcggcgtcg
     1321 cctcggtcac cagccgtcgc gagggcggca gcgaggtgtg gatcgggtat caggacttca
     1381 ccacgcctcc ccaggtgtgg tactcgcggg ttgatggtga cttctggcgt tccgcaggaa
     1441 caccccctgt tcctcaggaa cgccggatgg ctcccgccgc cacgctctgg gccacggcgc
     1501 cgggttcgcc cgaccttccg gcgatccgga cggagcaact gacgtatcgc tcgaaggacg
     1561 gcacgcccgt ccggatgttc gtcgtccacc gggcggacgc cggcccgtcg aacggccccc
     1621 acgccaccgt cctctacggc tacggcggct tccagatctc ccaggtgccg gcctactcgg
     1681 ccaccgtcgc cgcctgggtg gagcggggcg gcgtgtgggc cgtggccagc atccggggcg
     1741 gctccgagga gggcgaggcc tggcaccgcc acggcatgcg ggagcacaag cagcgctgct
     1801 tcgacgactt cgccgccgcc ggggaggccc tggtcgccgc cggctggacc gccccggagc
     1861 ggctcgggat ctacggcggc agcaatggcg gcctgctggt cggcgccacc ctcacccagc
     1921 ggccggagct ggcccgggcc gtcgtctgct ccgcccccct gctcgacatg gtccgctacg
     1981 agcgcttcgg cctcggccgg acgtggaacg acgagtacgg caccgccgcc gaccccgtcg
     2041 agttcggctg gctgctctcc tattcgccct accaccacgt cgagcgcggc acggcctacc
     2101 ccgcggtgct gttcacggtg ttcgacaacg acacccgggt cgatcccctc cacgcccgga
     2161 agctctgcgc cgccctccag tgggccacga gccgctcccc ggccgacgcc cccgtcctcc
     2221 tgcgccggga ggagaacgtc ggccacggcg ggcggtcggt cagccggacg gtggccctgg
     2281 ccgccgacgt cctgggcttc ttctgggagc tgactgggaa gtgatcggga caaacgcgcc
     2341 atgaacccct gatgaacccg gtacctttcg taacgtgctg aagttcctgc tccggcggtt
     2401 cgccaactac ctggtcctga tcgggctggc gacgtgcctc gggtacttcc tcgccgccag
     2461 cagcctcaac ccccgggcca attaccaggg ccggaacccc ccgccgtcgg aggcgtcgat
     2521 caacgccaag ctcgacgccc tgaacctcaa cgaccacacc ccggtcgtga agcgcttctt
     2581 ccgctgggcc ggcgacttcg tccacgggaa catgggcaag accgtcaacg agcagccggt
     2641 gtgggacgag atgaagcgtc gcatgggcgt gagcctccgg cttctgctga tcgggtcggt
     2701 gctcggcgcc gtcgtcgggg tcggcgtggg ggtgatcgga gcggtcaagc agtactccct
     2761 caccgaccat ttcacgacgg cctggtcatt cgtgctgctc tccacgcccg tcttcctgct
     2821 cgccgtcctc ctgaaggtgg ccggccacaa ctactggaac cagcacacac cggcctcctg
     2881 gcacctgtac tacgtcggcg agtacacacc gcacctcgac ggcggcctgt ggctccacgt
     2941 ccgcgaccgg atggcccatc tcgtcctgcc gacgctgggc atcgtgctcg gccaggtggc
     3001 gttctacagc c
//
LOCUS       DATGJT010000543         2775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1420365, whole genome shotgun sequence.
ACCESSION   DATGJT010000543 DATGJT010000000
VERSION     DATGJT010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2775
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420365"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VKX24_09355"
     CDS             complement(<1..851)
                     /locus_tag="VKX24_09355"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ08733.1"
                     /translation="MTPDSLRVALRGILSNRMRSALTMLGILIGTASVILLVAVGAGI
                     SNQVQSQIGKLGTNAVYILNEKHAGGRDRGGTISREIKLTKDDVRALSDRHRAPDVAR
                     ISPVESTAGTLTWNGTTYALGNFAGVETVWSDIRNIHLTEGRWITDGDQATRAKVGVI
                     GTTVIDHVFGKGVDPVGQTVSFNNVFIKIVGVLEHRGSNGTYDQDDVIYAPITTVFDD
                     IVGDSTDTYSAIGVQAASRTAINPAVAEVNGILRQTHDIKPGDAPDFKIFNAADLLAA
                     GKQTARS"
     gene            complement(848..1663)
                     /locus_tag="VKX24_09360"
     CDS             complement(848..1663)
                     /locus_tag="VKX24_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012895235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08734.1"
                     /translation="MEAVPEVDGELPVLLLEDVHKVYNPGSPLQVHVLKGVSFSVDQG
                     DYVAIMGSSGSGKSTMLNILGCLDIPTSGRYLISGVDVSELDDNQLAEVRNRYLGFVY
                     QSFNLVKRTSAQANVELPLVYAGVSKAERRRRALTALGLVGLGDRAHHMPNELSGGQQ
                     QRVAIARSIVTGPSVILADEPTGNLDPTSTEDVLQIFGRLNAAGRTVVMITHETDVAA
                     HAKRIIVLADGRIASDVRNAPVQGEPPHLVDLTAGDVDVTGPDELPAEQEAVA"
     gene            complement(1781..2245)
                     /locus_tag="VKX24_09365"
     CDS             complement(1781..2245)
                     /locus_tag="VKX24_09365"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HLJ08735.1"
                     /translation="MIAPVGTDPERAAADLLEVLPLWNRWLRAKVRSHEPSWSLPQLH
                     ALGYVRLNPGASLSELAGYLGIGLPTASTLVSRLVNAGYIHREEDPAERRRVSLSLTD
                     SGRGRFEGALDAARRELAGRLGRLSPRELGRISAAMAHLRAVVDDDGARPSR"
     gene            2325..>2775
                     /locus_tag="VKX24_09370"
     CDS             2325..>2775
                     /locus_tag="VKX24_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014596887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HLJ08736.1"
                     /translation="MCGIAGWVDFSSDAAPQRAVLQRMTDTMACRGPDAEGLWLDDHV
                     GLGHRRLAIIDLEGGRQPMEAAEAAEGDGTAAVLTYSGEVYNFKELRAELAAAGQPFT
                     TDSDTEVVLRAYLEWGDRFVERLNGMYAFALWDGRAERLLLVRDRMGI"
BASE COUNT          391 a          906 c         1038 g          440 t
ORIGIN      
        1 aacgaccggg ccgtctgctt cccggcggcg aggaggtcgg cggcgttgaa gatcttgaag
       61 tcgggggcgt cgcccggctt gatgtcgtgc gtttggcgca ggatgccgtt cacctcggcc
      121 acggccgggt tgatcgcggt gcgggaggcg gcctgcacgc cgatggccga ataggtatcg
      181 gtgctgtcgc cgacgatgtc gtcgaagacg gtggtgatcg gggcgtagat cacgtcgtcc
      241 tggtcgtagg tgccgttcga cccccggtgc tccaggacgc cgacgatctt gatgaagacg
      301 ttgttgaacg acaccgtctg gccgaccggg tccacgccct tgccgaaaac gtggtcgatg
      361 acggtggtgc cgatcacgcc gaccttggcc cgggtggcct ggtcgccgtc ggtgatccag
      421 cggccctcgg tcaggtggat gttgcggatg tcgctccaga ccgtctcgac gccggcgaag
      481 ttcccgaggg cgtaggtggt cccgttccag gtgagcgtcc cggcggtgct ctccacgggg
      541 gagatccggg ccacgtcggg agcgcggtgg cggtcggaca gcgcccggac gtcgtccttc
      601 gtcagcttga tctcccggga gatcgtcccg ccccggtccc gtcctccggc gtgcttctcg
      661 ttcaggatgt agacggcgtt ggtgccgagc ttgccgatct gcgactgcac ctggttggag
      721 atccccgccc ccacggccac cagcaggatg accgacgccg tgccgatcag gatgccgagc
      781 atcgtgagcg ccgagcgcat ccggttggac aggatgcccc ggagggcgac gcggaggctg
      841 tcgggggtca cgccaccgcc tcctgctcgg ccggcagctc gtcgggcccg gtgacgtcga
      901 cgtcgccggc ggtgaggtcg acgaggtgcg gcggctcgcc ttggacgggg gcgttgcgga
      961 cgtcggaggc gatccggccg tcggccagca cgatgatccg cttggcgtgg gcggcgacgt
     1021 cggtctcgtg ggtgatcatc acgacggtgc ggccggcggc gttgagccgg ccgaagatct
     1081 gcagcacgtc ctcggtggag gtggggtcga ggttcccggt cggctcgtcg gccaggatca
     1141 ccgacgggcc ggtgacgatg gaccgggcaa tggcgacgcg ctgctgctgg ccgcccgaca
     1201 gctcgttggg catgtggtgg gcgcggtccc ccagcccgac gaggccgagg gcggtgaggg
     1261 cccgccggcg ccgctcggcc ttggacacgc cggcatagac cagcggcagc tccacgttgg
     1321 cctgtgccga cgtccgcttg acgaggttga agctctggta gacgaagccg agataccggt
     1381 tgcggacctc ggccagctgg ttgtcgtcga gctccgagac gtcgacaccg ctgatcaggt
     1441 accggcccga ggtcgggatg tcgaggcagc ccaggatgtt gagcatggtg ctcttgccgc
     1501 tgccggagct ccccatgatg gccacgtagt cgccctggtc gacggagaac gacacgccct
     1561 tgaggacgtg cacctgcagc ggcgaccccg ggttgtagac cttgtggacg tcctccagca
     1621 gcaggacggg cagctccccg tcgacctcgg gcaccgcttc catcgcatcc ctccccgtcg
     1681 gacttccgga caaccggttc gcctgatggc aacccgaccg gggggtactt tattcgaaat
     1741 gcgaagtatt ctggaagaga acgctgacgg tgccgaaggg tcagcgactc ggcctcgctc
     1801 cgtcgtcgtc gacgacggcg cggagatgcg ccattgccgc cgagatccgg cccagctccc
     1861 ggggcgagag ccgccccagc cggccggcca gctcccggcg ggccgcgtcg agggcgccct
     1921 cgaaccggcc ccggccgctg tcggtgaggg agagcgacac ccgccggcgt tcggccgggt
     1981 cctcctcccg gtggatgtag ccggcgttca cgagccggga gacgagcgtc gaggcggtgg
     2041 gcagcccgat accgaggtag ccggccagct ccgacaggct ggcgccaggg ttgagccgga
     2101 cgtagccgag ggcgtggagc tggggcagcg accacgaggg ctcgtggctg cggaccttgg
     2161 cccggagcca gcggttccac agcggcagga cctcgaggag gtcggccgcg gcgcgttccg
     2221 gatccgtccc gaccggggct atcatccgct tttgtccctt cgtaatgcga acagttctca
     2281 cctgagcaaa tcttaggtgg aagggccgac ggggaggtag ggccatgtgc gggatcgccg
     2341 gctgggttga cttctcgtcc gacgcggcgc cgcagcgggc agtgctgcag cggatgaccg
     2401 acacgatggc ctgccgcggc cccgacgccg aggggctgtg gctcgacgac cacgtcggcc
     2461 tcggccaccg ccggctggcg atcatcgacc tcgagggcgg gcgccagccg atggaggctg
     2521 ccgaggctgc cgagggggac ggcaccgccg ccgtccttac ctacagcggc gaggtctaca
     2581 acttcaagga gctgcgggcg gagctggcgg cggcgggcca gccgttcacg accgacagcg
     2641 acaccgaggt ggtcctgcgg gcctacctcg aatggggcga ccgcttcgtg gagcggctca
     2701 acggcatgta cgccttcgcc ctgtgggacg gccgcgccga gcggctcctc ctcgtccggg
     2761 accgcatggg gatca
//
LOCUS       DATGJT010000544         4413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_901833, whole genome shotgun sequence.
ACCESSION   DATGJT010000544 DATGJT010000000
VERSION     DATGJT010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901833"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /gene="trpA"
                     /locus_tag="VKX24_09375"
     CDS             complement(<1..646)
                     /gene="trpA"
                     /locus_tag="VKX24_09375"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013579061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HLJ08737.1"
                     /translation="MPLNLNGNPSLVAYVTCGDPDMATSREIILAAIDAGAEVIELGV
                     PFSDPLADGPVIQRASQRALEHGTSLHDVLGLAGELRKLRPSVGLIVFSYLNPILRYG
                     LERFAADCRKAGIDGALVTDLTVEEADNYRRMMREHQLVTVFLAAPTSPDERLKKIAE
                     ASSGFIYAVARTGITGVRKELSAEAANLVERIRRFTTLPIAVGFGISTPEQFAET"
     gene            complement(646..1857)
                     /gene="trpB"
                     /locus_tag="VKX24_09380"
     CDS             complement(646..1857)
                     /gene="trpB"
                     /locus_tag="VKX24_09380"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014784548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HLJ08738.1"
                     /translation="MLGPPGPEPEERGRFGEFGGRFVPETLIPALMDLEDAFRRAWSS
                     EPFRSEFASLLTSYAGRPTPVTECHRLSERLGVRILLKREDLTHTGSHKINNVLGQAL
                     LTRRMGKKRVIAETGAGQHGVATATVCALMGFQCVVYMGTEDMQRQELNVFRMRLLGA
                     EVRGVDSGSRTLKDAINEAMRDWVTNVRDTHYLLGSVLGAHPYPAMVRDFHRVIGIEA
                     RKQILEAEGHLPDAVIACVGGGSNAIGAFYEFIGDKGVQLIGVEAGGRGTGLGDHAAR
                     FQGGTPGVLQGTYSYVLQDDAGQIALTHSVSAGLDYPSIGPEHAALHDSGRAEYVSAS
                     DSEALDACITLARTEGIIPALESSHAVAECIKRAPKMSKSQVVIVNISGRGDKDMGIL
                     TKELKIAGGKS"
     gene            complement(1917..2591)
                     /locus_tag="VKX24_09385"
     CDS             complement(1917..2591)
                     /locus_tag="VKX24_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HLJ08739.1"
                     /translation="MFVKVCGVTNEDDALLAVAMGADAVGFVFAPSPRQVHPEVVRDI
                     VKRLPPEILTVGVFRNETPERVVDVVGRTGLKGAQLHGGETAEDLRLVRLRVPFVIQA
                     LPAGDARLAGAGAGPESADVVLIDSQAPGSGEVFDWSLAEGAPDGVRLLLAGGLNPDN
                     VEQAIRKVRPWGVDAASGLEASPGRKDATKVRLFIARAREAAKALEEGWTPSADGPYD
                     WAEDGT"
     gene            complement(2605..3921)
                     /locus_tag="VKX24_09390"
     CDS             complement(2605..3921)
                     /locus_tag="VKX24_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019874117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HLJ08740.1"
                     /translation="MRYLMTPDKTPSAWFNVAPHLPEPLSPPMHPGTGQPVGPDDLAP
                     LFPMALIGQEMSADPWIDIPGEVLDILRLWRPTPLVRATRLERALDTPARIYFKDESV
                     SPAGSHKPNTAVAQAFYNKAEGIGRISTETGAGQWGSALAFACQQFGLECFVYMVAAS
                     YHQKPYRRVMMETWGGQVVPSPSDRTQAGKAVLARDPDTSGSLGIAISEAVEDAATHP
                     DTHYSLGSVLNHVLLHQTVIGLEARQQLEQAGEGLPDVVIGSCGGGSNLAGLALPFVP
                     DCAGAAAAKGGSGGPRLVAVEPSACPTLTEGRFEYDFGDEAGMTPKILMYTLGHEFIP
                     PPIHAGGLRYHGDAPIICNLVKNGWMEAVAYPQGKVFEAAVQFARTQGTIPAPETSHA
                     IRAAIDEALAAKESGEERVILFNYSGHGLLDLAAYDAFLHGQLVDV"
     gene            complement(3909..>4413)
                     /locus_tag="VKX24_09395"
     CDS             complement(3909..>4413)
                     /locus_tag="VKX24_09395"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF012444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HLJ08741.1"
                     /translation="ACGLPVLRKDFTVDPVQLHEARAAGADAVLLIVAALPDDRRLAD
                     LCALAGELGLAALVEADDEAGVERALAAGARIVGVTNRNLRDFGEDLSAGVRLAGLIP
                     PGVVAVAESAIRSVDDARAMADAGFSAVLVGEHLVRSSDPGAAVAALAAVPVKQPKGG
                     REIECAT"
BASE COUNT          677 a         1545 c         1525 g          666 t
ORIGIN      
        1 ccgtctcggc aaactgctcc ggagtggaaa tgccgaaccc cacggcgatc ggcagcgtgg
       61 taaatcgacg gatgcgttcg acgagattgg cggcttccgc ggagagttcc ttgcgcacgc
      121 cggttatgcc ggtgcgggca accgcataga taaatccgga agaagcttcg gcgatcttct
      181 tgagccgctc atcaggactg gtcggggccg caagaaacac cgtcaccaac tggtgctcgc
      241 gcatcatgcg gcgatagtta tccgcttctt cgacggtcaa atccgtgacc agcgcgccat
      301 cgatgccggc cttgcggcaa tccgccgcga agcgctccag gccgtaacgc aagatcgggt
      361 tgagatagct gaagacgatc agtcccacgc tgggacgcag tttccgcaac tcgccggcaa
      421 ggcccaacac gtcatgcagg gaagtgccgt gctccagggc gcgctggctg gcgcgctgga
      481 tcactggtcc atcggccaag ggatcgctga acggaacgcc caactcgatg acctcggctc
      541 cggcgtcaat ggctgccagg atgatctcgc gagaggtcgc catgtcggga tcgccgcagg
      601 tgacatacgc gaccagcgag ggattgccgt tgaggttcag cggcatcagc ttttccctcc
      661 ggcaatcttc aattccttcg tgagaatccc catgtcttta tctccgcgac cggagatatt
      721 cacgatcacc acttgcgact tgctcatctt cggcgcgcgc ttgatgcact ctgcaactgc
      781 atgggaagac tccagcgcgg gaatgatgcc ctcggtccgc gccagcgtga tacaggcatc
      841 gagtgcctcg gaatcggagg cagaaacgta ttcggcgcgg ccgctatcgt gcagcgcggc
      901 gtgttccggg ccgatggaag gataatccag tccggcggaa acggagtgcg tgagcgcgat
      961 ttgtccggca tcatcctgca gcacatagga ataggtgccc tgcaggacac cgggagtacc
     1021 gccttgaaaa cgcgccgcat gatcgcccag acctgtaccg cgtccgccag cttcgacgcc
     1081 gatcagttgc acgcctttgt cgccgatgaa ttcgtagaat gcaccgatgg cattcgagcc
     1141 gccgcctaca caagcgatca cggcatcggg caagtgccct tcggcttcga gaatctgttt
     1201 gcgggcttcg atcccgatca cgcgatgaaa atcccgcacc atcgccggat acggatgtgc
     1261 acccagcacg ctgcccagca ggtagtgtgt gtcgcgcacg ttcgtgaccc aatcgcgcat
     1321 ggcttcgttg atggcgtctt tcagggtgcg cgagccggaa tcgacgcccc gcacctcggc
     1381 gcccagcagc cgcatgcgga agacgttgag ttcctggcgc tgcatgtcct cggtacccat
     1441 gtagaccacg cactggaagc ccatgagcgc gcacacggtc gcggtcgcaa cgccatgctg
     1501 tcccgcgccg gtctcggcaa tcacgcgctt cttgcccatc cggcgcgtga gcagcgcctg
     1561 accgagcacg ttgttgatct tgtgggagcc ggtgtgcgtc aggtcctccc gcttgagcag
     1621 gatccgcacg ccgagccgct ccgagagccg gtggcactcg gtcaccggcg tgggccggcc
     1681 ggcgtagctc gtgagcagcg aagcgaactc cgatcggaac ggctccgacg accacgcccg
     1741 gcggaaggcg tcctccaggt ccatcagcgc cgggatcagc gtctcgggga cgaaccggcc
     1801 cccgaactcg ccgaagcgcc cccgctcttc cggctccgga ccgggcgggc cgagcacgac
     1861 agggtcgccc cgggagggga cggtgccggc gggggcgccc tgcaccccgg gggccgtcac
     1921 gtcccgtcct ccgcccagtc gtagggcccg tcggcggacg gcgtccagcc ttcctccagc
     1981 gccttggccg cctccctggc ccgggcgatg aacagccgga ccttggtggc gtccttcctg
     2041 cccggggacg cctcgagccc ggaggcggcg tcgacgcccc agggccgcac cttcctgatg
     2101 gcctgctcga cgttgtcggg gttgagcccc ccggccagca ggaggcgcac gccgtccggg
     2161 gcgccctcgg ccagcgacca gtcgaacacc tcgcccgatc ccggcgcctg ggagtcgatc
     2221 agcaccacgt cggcggactc cggcccggcg ccggccccgg ccagccgggc gtcgccggct
     2281 gggagcgcct ggatcacgaa cgggacccgc agccgcacga gccgcaggtc ctcggccgtc
     2341 tcgccgccgt ggagctgggc gcccttgagc cccgtccgcc ccacgacgtc gaccacccgc
     2401 tccggcgtct cgttgcggaa cacgccgacg gtgaggatct ccggcggcag ccgcttcacg
     2461 atgtcgcgca ccacctcggg gtggacctgc cgggggctgg gcgcgaagac gaagccgacg
     2521 gcgtcggcgc ccatggccac cgccagcagc gcgtcgtcct cgttggtgac gccgcagacc
     2581 ttgacgaaca aggagctcct tctcctagac gtcgaccagc tggccgtgga ggaaggcgtc
     2641 gtaggcggcg aggtcgagca ggccgtggcc ggagtagttg aacaggatga cccgctcctc
     2701 ccccgactcc ttggccgcca gcgcctcgtc gatcgccgcc cggatggcgt gcgacgtctc
     2761 cggggccggg atcgtgccct gggtgcgggc gaactgcacg gcggcctcga agaccttgcc
     2821 ctgcgggtag gccacggcct ccatccaccc gttcttcacc aggttgcaga tgatcggggc
     2881 gtcgccgtgg tagcgcaggc cgccggcgtg gatcggcggc gggatgaact cgtggcccag
     2941 cgtgtacatg aggatcttcg gcgtcatgcc ggcctcgtcg ccgaagtcgt actcgaagcg
     3001 gccctcggtc agcgtcgggc aggccgacgg ctccacggcc acgaggcgcg gcccgcccga
     3061 gccgcccttg gccgccgccg ccccggcgca gtcgggcacg aacggcagcg ccagcccggc
     3121 caggttggag ccgccgccgc aggagccgat gaccacgtcg ggcaggccct cgccggcctg
     3181 ctccagctgc tggcgggcct cgaggccgat gacggtctgg tggagcagca cgtggttgag
     3241 caccgatccg agcgagtagt gcgtgtcggg gtgggtggcg gcgtcctcca ccgcttcgct
     3301 gatggcgatg ccgagcgacc cggaggtgtc ggggtcgcgg gccaggacgg ccttgccggc
     3361 ctgggtgcgg tcggacgggc tcggcacgac ctggccgccc cacgtctcca tcatcacccg
     3421 gcggtagggc ttctggtggt acgacgccgc caccatgtac acgaagcact ccagcccgaa
     3481 ctgctggcag gcgaaggcca gggcgctccc ccactggccg gccccggtct cggtcgagat
     3541 ccggccgatg ccctcggcct tgttgtagaa ggcctgggcc acggcggtgt tgggcttgtg
     3601 ggacccggcc ggcgagaccg actcgtcctt gaagtagatg cgggccggcg tgtcgagcgc
     3661 ccgctccaac cgggtggccc gcaccagcgg cgtcggccgc cacagccgga ggatgtcgag
     3721 cacctcgccg gggatgtcga tccacggatc ggccgacatc tcctggccga tcagcgccat
     3781 ggggaacagc ggggcgaggt cgtcgggccc gaccggctgc cccgtgccgg gatgcatcgg
     3841 cggcgacagc ggctcgggca ggtggggagc gacgttgaac caggcgctcg gagtcttgtc
     3901 cggggtcatc aggtagcgca ttcgatctcc cttccgccct tcggttgttt cacggggact
     3961 gcggccaggg ccgccacggc ggccccggga tcggacgacc ggacgagatg ctcgccgacg
     4021 agcaccgccg agaacccggc gtcggccatg gcccgggcgt cgtcgaccga gcggatagcg
     4081 ctctcggcca ccgccacgac gccggggggg atcagcccgg ccaggcgcac gccggccgag
     4141 aggtcctcgc cgaagtcccg caggttgcgg ttggtgacgc cgacgatccg ggcgccggcc
     4201 gccagcgccc gctcgacacc cgcctcgtcg tcggcctcga ccagggcggc cagtccgagc
     4261 tcgccggcca gcgcgcacag gtcggctagc cgccggtcgt cgggcagggc ggccacgatc
     4321 agcaggacgg cgtcggcccc ggccgcccgg gcctcgtgga gctgcaccgg gtcgacggtg
     4381 aagtccttgc ggaggacggg cagcccgcag gcc
//
LOCUS       DATGJT010000545         2236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_385086, whole genome shotgun sequence.
ACCESSION   DATGJT010000545 DATGJT010000000
VERSION     DATGJT010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385086"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /locus_tag="VKX24_09400"
     CDS             complement(<1..828)
                     /locus_tag="VKX24_09400"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HLJ08742.1"
                     /translation="MDSARSQNPPAGFLSTGIDPLGAVRRHKLLLVALTVVGVAAGLF
                     YGTAVAKPSYTSTATVLVTPITPNVSPAGVDQLVAMGTEQQIAESTAVADLAKARLKT
                     TQTVTDLQSKLKVGVDSTTQLMTIGCTDGTTVAAQACAQAFADSYLQYRSQQAAQSRD
                     ARVASANAALAPIDAQIVAATQQLATAPVNSAAAATAQETLRSLGNQAAPYRQTLGDM
                     ARLNVDDPGVVVSAADRPDSPSGFSPSFLGVLGGLVGLVLGLLLAFGRDRVDNRLRGR
                     "
     gene            1147..2139
                     /locus_tag="VKX24_09405"
     CDS             1147..2139
                     /locus_tag="VKX24_09405"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013225353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ08743.1"
                     /translation="MKLALYLPNFRTQVTIKELEDCTSLAEELDFDSVWTLDRIVVPE
                     ASDRGELQYPFGMMTEFPRGMPVASNGTWFQGWPLIPWLAAKTTKVRIGMSITDTPYR
                     APGVLATELATVDHLCNGRLNVGVGSGWMPEEFAAASASHIFPKRHKHVRETIEIMQG
                     VWTNELFEYHGEFADFDKCGFGAKPVQQPHPPIFFSGLREPKRSASRIAKYNLSGWIG
                     IQDTPDELQQWLGEIQRELEELGSSRSVGDLEICSMCWFVITDVDMDQTPAGKATNLL
                     VGSAAQITDMLKRYKEAGLTMPLLWPPFNDVPTAKTLDDMKRLKNEIMPKVDAM"
BASE COUNT          358 a          767 c          793 g          318 t
ORIGIN      
        1 gcggccccgg agccggttgt cgacccggtc tcgtccgaag gccagcagca ggccgaggac
       61 gaggccgacg aggccgccaa ggacacccag gaaggacggg ctgaaaccgc tcggcgagtc
      121 gggccggtcg gccgcactga ccaccacgcc ggggtcgtcg acgttcagcc gggccatgtc
      181 gcccagcgtc tggcggtacg gggcggcctg gttcccgagg ctccgcagcg tctcctgggc
      241 ggtggcggcg gcggcgctgt tgaccggggc ggtggccagc tgctgtgtgg cggccacgat
      301 ctgggcgtcg atgggggcca gcgcggcgtt ggcgctggcc acccgggcgt cgcgggactg
      361 ggccgcctgc tgggaccggt actggagata ggaatcggcg aaggcctggg cgcaggcctg
      421 ggcggcgacg gtcgtgccgt cggtgcagcc gatggtcatc agctgcgtgg tcgagtcgac
      481 gccgaccttc agcttcgact gcagatccgt cacggtctgg gtcgttttga gccgggcctt
      541 ggccagatcg gccacggccg tcgactcggc gatctgctgc tcggtgccca tcgccaccag
      601 ctggtcgacc ccggcggggc tgacgttggg ggtgatgggc gtcaccagca ccgtggccgt
      661 cgacgtgtag gacggcttgg cgacggcggt gccgtagaac aggcccgccg ccacgccgac
      721 caccgtgagg gccaccagca gcagcttgtg ccgccgcacc gcgcccagtg ggtcgatacc
      781 ggtcgacaag aaaccggccg gcgggttctg gctcctggct gaatccacga tgcgctccaa
      841 caccatccga ggggaacggg cgcgtcgaga gcagcccgcg gcccgggcga ggcccgagga
      901 ccggggggcg gccgtcgact cccagcgccg gccacggtac gccggtcacg atgagtgtcc
      961 gatgagcgcg ccgtccggag cggtcggggc cgaaccgccg gccatcgtcg agcccccggg
     1021 accgccgccg gaagaactgt tagcttcgtg aaacccctgc gggcacgtcg aggggctcgg
     1081 aggcgtgccg cccgaccagc gttggccgtt gtgacccagt agctcacggt gaggaggccg
     1141 tctcgcatga agctcgctct gtacctgccg aacttccgga cccaggtgac catcaaggag
     1201 ctcgaggact gcaccagcct cgccgaagag ctcgacttcg actccgtctg gacgctcgac
     1261 cggatcgtcg tcccggaggc ctccgaccgc ggagagctcc agtacccgtt cggcatgatg
     1321 acggagttcc cccggggcat gccggtggcg tcgaacggca cctggttcca gggctggccg
     1381 ctgatcccct ggctggcggc caagacgacc aaggtccgga tcggcatgag catcaccgac
     1441 acgccctatc gggcccccgg cgtcctggcc acggaactgg ccaccgtcga ccacctctgc
     1501 aacggccggc tcaatgtggg cgtcgggtcc ggctggatgc ccgaggagtt cgccgccgcc
     1561 agcgcgtcgc acatcttccc caagcggcac aagcacgtgc gggagacgat cgagatcatg
     1621 cagggcgtct ggaccaacga gctcttcgag taccacggcg agttcgccga cttcgacaag
     1681 tgcgggttcg gggccaagcc cgtgcagcag ccgcatcctc cgatcttctt cagcggcctc
     1741 cgggaaccga agcgatcggc gagccgcatc gccaagtaca acctgtcggg ctggatcggg
     1801 atccaggaca cccccgacga gctccagcag tggctcggtg agatccagcg ggagctcgag
     1861 gagctcggga gctcccgctc ggtcggggac ctcgagatct gcagcatgtg ctggttcgtc
     1921 atcaccgacg tcgacatgga ccagacgccg gccggaaagg ccaccaacct gctggtggga
     1981 tcggcggcgc agatcaccga catgctcaag cgctacaagg aggccgggct gacgatgccc
     2041 ctcctgtggc cgcccttcaa cgacgtgccg acggcgaaga cgctcgacga catgaagcgc
     2101 ctgaagaacg agatcatgcc caaggtcgac gccatgtgac gtcccccgcg tccgtcccga
     2161 tggcggcagc cttcaccatc cgagccagcc ggcggagccg cacgtaggac cggatccgcc
     2221 ggagctcggt ttcctc
//
LOCUS       DATGJT010000546         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_799451, whole genome shotgun sequence.
ACCESSION   DATGJT010000546 DATGJT010000000
VERSION     DATGJT010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799451"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /gene="manB"
                     /locus_tag="VKX24_09410"
     CDS             complement(<1..817)
                     /gene="manB"
                     /locus_tag="VKX24_09410"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="converts mannose-6-phosphate to
                     mannose-1-phosphate; the resulting product is then
                     converted to GDP-mannose by ManC which is then used in the
                     synthesis of mannose-containing glycoconjugates that are
                     important for mediating entry into host cells; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HLJ08744.1"
                     /translation="MLDPDAFKAYDVRAVYPTELDAEGAYATARAFVEVFDPERIAVG
                     RDMRLSSPEIARAVIEGAADGGAHVVDLGLVGTEMVYFATGYLGLDGGIMVTASHNPK
                     QYTGLKIVGVGAQPVGGESGLLEVRDRALAADWRPARRGSVEAEDIWEPFVDAAVSFV
                     DLDAIVPLRVVVDAANGMAGTMLPRILDRLPQVDVVRCYFEPDGSFPHHEPNPLLPEN
                     REFVMAKTLAEGAAFGVAYDGDADRCFFVDERGEFVPGDFTTALFAESILARNP"
     gene            complement(858..1685)
                     /locus_tag="VKX24_09415"
     CDS             complement(858..1685)
                     /locus_tag="VKX24_09415"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HLJ08745.1"
                     /translation="MGARRLHFGPARVPSHDTPGAALAALLAGGFSACEIDFEARFWM
                     DYDFAAEFGGLARQNDIALSVHAPLAGFMGHAERGKKLNMAMGMLDHSAGIARTAGAE
                     LVVFHPGFLLGRTREQAIGAVCEQLAELRERLEAKDRAVPFGIEVMGRVRELGSAEDV
                     VEISRRLGWVRPVLDFAHMHATSDGAFTTVEPFAEALARVDEVLAPGAPFHIHFSDIQ
                     FANRNETKHLPYGEGTLRAEPLAAALARFPRPATVISEAPDAASTEAIRTALGAASP"
     gene            1743..1985
                     /locus_tag="VKX24_09420"
     CDS             1743..1985
                     /locus_tag="VKX24_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08746.1"
                     /translation="MSTRPSRIDLLELDIDLRLNDLWREAIGIEEWSIEVVAAFMRAA
                     YGKGYCDALTEESPGALCADHGYRIPARRPAARAES"
BASE COUNT          308 a          767 c          793 g          291 t
ORIGIN      
        1 ccgggttgcg ggccaggatc gactcggcga acagggccgt ggtgaagtcg ccggggacga
       61 actcgccccg ctcgtcgacg aagaagcagc ggtcggcgtc cccgtcgtag gcgaccccga
      121 acgcggcccc ctccgcgagc gtcttggcca tgacgaactc gcggttctcg ggcagcaacg
      181 ggttgggctc gtgatggggg aaggagccgt cgggctcgaa gtagcagcgc acgacgtcga
      241 cctggggtag gcggtcgagg atccgcggca gcatcgtgcc ggccatcccg ttggcggcgt
      301 cgacgacgac ccggaggggc acgatcgcgt ccaggtcgac gaacgagacg gcggcgtcga
      361 cgaacggctc ccagatgtcc tcggcctcga ccgacccacg ccgggccgga cgccagtcgg
      421 cggccagcgc ccggtcgcgg acctcgagca ggcccgactc gcccccgacc ggctgggctc
      481 cgacgccgac gatcttgagc cccgtgtact gcttggggtt gtgcgaggcg gtgaccatga
      541 tcccgccgtc gagtccgagg tagccggtgg cgaagtagac catctccgtc ccgaccagac
      601 ccaggtcgac gacgtgggcg ccgccgtcgg cggcgccctc gatcaccgcc cgggcgatct
      661 cgggcgacga gagccgcatg tcgcggccga ccgcgatccg ctcggggtcg aacacctcga
      721 cgaacgcgcg cgcggtcgcg taggcaccct cggcgtcgag ctcggtcggg tacacggccc
      781 gtacgtcata ggccttgaag gcatcggggt cgagcacgcg cgccgatctt acgggccgcg
      841 ccgccgcgcc cgcggtttca ggggctagcc gccccgagcg ccgtgcggat ggcctcggtc
      901 gaggcggcgt cgggcgcctc cgagatcacg gtcgcgggtc gagggaaccg cgcgagcgcg
      961 gccgcgagcg gttcggcccg cagcgtcccc tcgccgtagg gaaggtgctt ggtctcgttg
     1021 cggttggcga actggatgtc cgagaagtgg atgtggaagg gcgcccccgg cgccagcacc
     1081 tcgtcgacgc gcgccagcgc ctcggcgaac ggctcgaccg tggtgaaggc gccgtcggag
     1141 gtcgcgtgca tgtgggcgaa gtcgagcacc gggcgtaccc agcccaggcg ccgggagatc
     1201 tcgaccacgt cttcggccga gcccagctcg cggacgcgtc ccatgacctc gatcccgaac
     1261 gggaccgccc ggtccttggc ctccaagcgc tcccgcagct cggccagctg ctcgcagacc
     1321 gcgccgatcg cctgctcccg ggtgcgtccg agcaggaagc cggggtggaa cacgaccagc
     1381 tcggcgccgg cggtgcgggc gatgccggcc gagtggtcga gcatccccat ggccatgttg
     1441 agcttcttgc cccgctcggc gtgccccatg aagcccgcca gcggcgcgtg caccgacagg
     1501 gcgatgtcgt tctggcgggc caggccgccg aactcggcgg cgaagtcgta atccatccag
     1561 aaccgagcct cgaagtcgat ctcgcaggcc gagaacccgc cggcgagaag cgcggccagg
     1621 gcggccccgg gggtgtcgtg cgagggcacc cgggcggggc cgaagtggag tcggcgcgcg
     1681 cccatcgccg ccagcctacc cggccgaaat ccgtccgacc cccgatctag gctgggcctg
     1741 cgatgagcac ccgtccgtca cgcatcgacc tgctcgagct cgacatcgat ctccgcctca
     1801 acgacctctg gcgcgaggcg atcgggatcg aggagtggtc gatcgaggtg gtggcggcgt
     1861 tcatgcgggc cgcgtacggc aagggctact gcgacgcctt gaccgaggag tctccgggcg
     1921 cgctgtgcgc tgaccacggc taccgcatcc cggcacggcg tccggcggcc cgggccgagt
     1981 cctgaacccg gcgggcggcg cgggcccctt gggcaccgat cgccgccgag gatggctaaa
     2041 ctgacgctcg atggcccgct ctagccgcac cccggcgagg ctgatcgtcg cgttgtcggt
     2101 ggcagcggtt ctggcggttt tcctcctcta cacggcgttc acgggcacga ccccggcgc
//
LOCUS       DATGJT010000547         4964 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_902355, whole genome shotgun sequence.
ACCESSION   DATGJT010000547 DATGJT010000000
VERSION     DATGJT010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4964
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902355"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..379
                     /locus_tag="VKX24_09425"
     CDS             95..379
                     /locus_tag="VKX24_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08747.1"
                     /translation="MDDSPEIYENMAKALAILTAWNESGDGDLSLAERTTLGYLDNQP
                     DPDAKVREAINLISGLVSLGGRMLLQLAQNLAVNEGELLRIMGQRIAYRP"
     gene            complement(425..760)
                     /locus_tag="VKX24_09430"
     CDS             complement(425..760)
                     /locus_tag="VKX24_09430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08748.1"
                     /translation="MDDLRAKALLQDERARVQRLLDGSSAAGRSDREAIEQDAGSSDA
                     GELLSSQGTDDALTSELRDRLAALDRAEERLAAGTFGRSVRSGQPIPDERLEADPAAE
                     LTVEEATQS"
     gene            965..1543
                     /locus_tag="VKX24_09435"
     CDS             965..1543
                     /locus_tag="VKX24_09435"
                     /inference="COORDINATES: protein motif:HMM:NF015596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08749.1"
                     /translation="MSFPLRLRRPLIAIGAVGAAVLTACGGSSTPKATAGGAVTSTTT
                     STAPAASPGTMFSTAEVSGLGTVVVDGQGHTVYLLTSGNGKNAPCDDASGCTKVWPDL
                     ALPVGTPAATAGTGLQASLLGTTKLADGETYPTYNGWLMYEYVGDSGPAQNHGQGLQS
                     FGGTWSAITPAGAPVTPAATPSTAGSTSSTGY"
     gene            1551..2609
                     /gene="rsgA"
                     /locus_tag="VKX24_09440"
     CDS             1551..2609
                     /gene="rsgA"
                     /locus_tag="VKX24_09440"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HLJ08750.1"
                     /translation="MPTTPTAAELAALGWDDGWAAALAEVGDPALLPARVSRVDRGLC
                     SVMAGTAVVRVAAERGVDIAVGDWVALGPGASAGDRPRIAGVLPRRCVFRRAADGRAA
                     AGQVVAANIDTVLLFDAIDGSLSLRHLERYLALAWQSGATPVVLITKSDAAPAAVVAE
                     AVTAVQAVAEGVSVVVVSATTGDGLAGLAPYLAPGRTAALLGLSGAGKSTLVNLLAGA
                     EVLATGAVRRDGKGRHTTTHRQLVLLPGGGLLIDTPGMRALSVVGAGDGVEQAFHDVE
                     VLAQGCEYDDCAHAGEQGCALTAALSDGRLTRRRLESWLRLRAETPATDYAAARGLVE
                     DRKRRKATKVAGRRAAPP"
     gene            2915..3202
                     /locus_tag="VKX24_09445"
     CDS             2915..3202
                     /locus_tag="VKX24_09445"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HLJ08751.1"
                     /translation="MKNTYMNMIATVRGGTLEQYDKAAAELIKANPPTGLLHHVCVPT
                     DDGFMVIETWESEKAIEDFTTSERFQREIGASGMPKPDLRIRPVHNMRVLS"
     gene            3911..4762
                     /locus_tag="VKX24_09450"
     CDS             3911..4762
                     /locus_tag="VKX24_09450"
                     /inference="COORDINATES: protein motif:HMM:NF033748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class F sortase"
                     /protein_id="HLJ08752.1"
                     /translation="MQDRPSRRRRLRRLGRGRSLVVLLVTAGFTGGVVLGGGPAGDSR
                     EPPADRAGVSRVALPIARDMASALPEPDPSPVPAAVPATVPADPVASQALPPAPAVSP
                     GPASASSVPVRSPVRQADPRPWTASSAPLAGSPPIRVEIAAVGVTAPIGPLGLNRDGT
                     LQVPADFGRAGWYTGRPTPGESGPAVIVAHRASRRGPGAFWRLPDVQAGQDIVITRAD
                     GRRILFTVDRVEQHRKDAFPTAAVYGPVPETALRLITCGGPFEPALGDHYRDNVIVFA
                     HMTGWAA"
     gene            complement(4763..>4964)
                     /locus_tag="VKX24_09455"
     CDS             complement(4763..>4964)
                     /locus_tag="VKX24_09455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004562359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class F sortase"
                     /protein_id="HLJ08753.1"
                     /translation="VVFVIDRLESAPKNTFPTSEVYDPTPNATLRLITCGGSFDHATG
                     HYRDNEIAFAHYQSMTPPPAGA"
BASE COUNT          684 a         1814 c         1729 g          737 t
ORIGIN      
        1 gcttcctcga cgaggcccag gacttccagg cctgaggggg catcgggtca ggccgtggtc
       61 gaccggcccc tcggcgccag tacgctcccg gagcgtggat gacagcccgg agatctacga
      121 aaacatggcc aaggcgttgg cgatcctgac cgcctggaac gagagcggcg acggggacct
      181 gtccctcgcc gagcggacga ccttgggcta cctcgacaac cagcccgacc cggacgccaa
      241 ggtccgcgag gcgatcaacc tgatctccgg actggtgtca ctcggcgggc ggatgctcct
      301 ccagctggcc cagaacctgg cggtgaacga gggcgagctc ctccggatca tgggccagcg
      361 cattgcctac cgcccctgat gagcgcatcg gctcgacggg tcatggcttt tcacccggcg
      421 ggagtcagga ctgggtggcc tcctccaccg tgagctcggc ggcaggatcc gcttcgaggc
      481 gctcgtcagg aatgggctgg ccgctgcgga ccgaccgacc gaacgtcccg gcggccagtc
      541 gctcctcggc gcggtcgagg gccgccaacc gatcgcgcag ctcagaggtg agggcgtcgt
      601 cggttccctg gctggagagg agctcgcccg cgtcgctgga gccggcgtcc tgctcgatgg
      661 cctcccggtc ggagcggccc gccgcgctgg agccgtcaag caaccgctgg accctggccc
      721 gctcgtcttg cagcagggct ttcgcccgta gatcgtccat gaccctcctc ggtcctaggg
      781 agcaccagtc tgccgaacgt gccgggaatg gacggatcgt gctggggcgt ctcacccacc
      841 gccggtcata ccccgaaccc tgggtggtag tctcctgatg aggacgcccg gaccttgcgt
      901 tcgcgatcac ccgccatgac gctgccaccc cctcggcgca gcgggtactc gtaggaggcc
      961 gtgagtgtcg ttcccgttgc gtcttcgccg cccgctgatc gccatcggtg ccgtgggagc
     1021 ggccgtcctc accgcctgcg gcggttcctc gactcccaag gccaccgccg gcggcgccgt
     1081 cacgtctacg acgaccagca ccgcgccggc ggcgtcgccg ggaacgatgt tcagcaccgc
     1141 cgaggtctcg ggcctgggga cggtcgtcgt cgacgggcag ggccacacgg tctacctcct
     1201 cacgtccggc aacgggaaaa acgcgccctg cgacgatgcg tccggctgca ccaaggtctg
     1261 gcctgacctg gccctccccg tcgggacgcc ggcggcgacg gcggggaccg gcctgcaggc
     1321 atccctgctc gggaccacga agctggccga cggcgagacg taccccacct acaacggttg
     1381 gctcatgtac gagtacgtcg gcgacagcgg acccgcccaa aaccacggcc aaggcctcca
     1441 gagcttcggc ggaacctggt cggcgatcac cccggccggc gctcccgtga ccccggccgc
     1501 caccccgtcc acggccggca gcaccagcag caccgggtac tgaccccacg gtgcccacca
     1561 ccccgacggc tgcggaattg gcggctctcg ggtgggacga cggctgggcg gcggcactgg
     1621 ccgaggtggg cgatccggcc ctcctgcccg cacgcgtctc tcgggtcgac cgcggtctgt
     1681 gcagcgtcat ggccggaacg gcggtcgtcc gggtcgccgc cgaacgcggt gtggacatcg
     1741 cggtcggcga ctgggtggct ctcggtccgg gggcgagcgc tggggaccgg ccgcggatcg
     1801 ctggcgtcct ccctcgccgg tgcgtgttcc gccgagccgc cgatgggcgc gccgccgcag
     1861 gccaggtcgt ggcggccaac atcgacacgg tgttgctgtt cgatgccatc gacggaagtc
     1921 tcagccttcg ccacctcgag cggtacctgg ctctggcatg gcagagcggc gccacgcccg
     1981 tcgtcctgat caccaagtcc gacgccgctc cggcggcggt tgtggcggaa gcggtcacgg
     2041 cggtccaagc cgtggccgaa ggggtcagcg tcgtcgtcgt cagcgccacg acgggcgacg
     2101 gcctcgctgg tctggcgccc tacctggccc ccgggcggac ggcggcgctc ctgggcctgt
     2161 ccggagcagg gaagtcgacc ctggtgaacc tgctggcggg ggccgaggtc ctggccacgg
     2221 gggcggtgcg ccgcgacggc aaggggaggc acacgacgac gcaccgccag ttggtcctcc
     2281 ttcccggcgg cgggctcctg atcgacactc cggggatgcg ggccctctcg gtcgtggggg
     2341 cgggggacgg ggtggagcag gccttccacg acgtcgaggt gctggcccag ggctgcgagt
     2401 acgacgattg cgcccacgcc ggcgagcagg gatgtgcgct cactgcggca ctgagcgacg
     2461 gccgcctgac gcgtcgccgc ctggagagct ggctccggtt gcgggccgag accccggcga
     2521 ccgactacgc ggcggcccgc ggcctggtcg aggaccgcaa gcggcgcaag gccacgaagg
     2581 tcgcgggccg ccgagccgcg ccgccgtagc tgcccgttca ggtttgccgg cttcattccc
     2641 tctgcgccgt tccgccggag gtgcgccgct cgacgttctg aggccggaag cgacggtagg
     2701 ccgatcgcgg tagactccca gtgctaccga agtgctcggc gcacaacggg aagctggtgc
     2761 tgatccaggt aaggcagacg ccgggccgag gagcacctac gaccccgcga cagcgggagg
     2821 aacggggaac gggcgtccgc cattcgcaag actctccccc gcgccagggg cgcgtcgggc
     2881 gcgacacccc gttccgtgaa ctgagaggat tggcatgaag aacacgtaca tgaacatgat
     2941 cgcgaccgtc cgcggcggca cgctcgagca atacgacaag gccgccgctg agctcatcaa
     3001 ggccaacccg cccaccggac tcctgcacca cgtctgcgtt ccgaccgacg acggcttcat
     3061 ggtcatcgaa acctgggagt cggaaaaggc catcgaggac ttcaccacca gcgaacgctt
     3121 ccagcgggag atcggcgctt cgggaatgcc caagcctgat ctccggattc gcccggtcca
     3181 caatatgcgg gtgctgagtt agccgtcgga ggctcttcgg cgggacccac cgtttgcgcg
     3241 ctgagcgtcc catgcctgtc ggcgttggcc ctcgtgttaa cgttgaggtg ccagttacgg
     3301 cggccaagtg ccctgtgacg gcggcgcact ccagaccccg gtcgcgcatc ctggtgtgtc
     3361 tccgtcgagc aggaaggaac tctatgcaga ccgtcggcgt attggcctcg gcactcgtcg
     3421 tggcaggcgc ggtcgccgcc gccgtggtgg tcgtcaagtc gcttcccgac atcgcgcact
     3481 accgccgcct ccggaacatg tgacctcggg acgggggatc gccgacgccc ccggccgcgc
     3541 accccggcgt cgatttccct ccgctcgatc caccgccggc ctgtccggct tgacgtccag
     3601 gggctccgcg acccgcttcc gggcctcgag ccccgaactc ctcccgggtt agcccgacgg
     3661 cgcgcctgat acatcctcac cgcccggtca cgagtctcgt ggtcatagtg ccgaagtagc
     3721 aggcgccccc gtcgtcgttg gccggccctt gacgcccggg tgagtggggg cccacagttg
     3781 tcgtccgacg gcctgtccag accccgcacg ccgtcgggcc acctcgtgac gttgtcctga
     3841 cagcgccggc cacggggccg atcgctgggg gtccccgatt cggaacgggg ggccggtgct
     3901 ggcggagagc gtgcaagacc ggccctcgcg gcgccggcgg ctcaggcggc tcgggcgggg
     3961 ccgctcgctg gtggtgctcc tcgtgaccgc cggcttcacc gggggcgtcg tcctcggcgg
     4021 aggcccggcc ggggacagca gggagccgcc ggccgaccgg gcgggcgtgt cccgggtggc
     4081 ccttccgatc gcccgcgaca tggcatccgc cctccccgaa ccagatcctt ctccggtgcc
     4141 ggcggcggtg ccggccaccg ttcccgccga tccggtcgcc tcccaggcgc tgccgccggc
     4201 tccggctgtc tccccgggac ccgcctccgc ctcgtccgta cccgtccgct cgccagtccg
     4261 tcaggcggac cctcgcccgt ggacagcctc gtcggcgccg ctcgctggct caccgccgat
     4321 ccgggtcgag atcgctgcgg tcggggtcac cgccccgatc ggcccgctcg gtctcaatcg
     4381 ggacggcacg ctccaggttc ccgccgattt cggccgcgcc ggttggtaca ccggccgccc
     4441 cacgcccggg gaatccggcc cggcggtcat cgtcgcccac cgcgccagcc gccgcggtcc
     4501 tggcgccttc tggaggctcc ccgatgtgca ggcgggccag gacatcgtca tcacccgggc
     4561 cgacggcagg cgcatcctct tcaccgtcga ccgggtcgag cagcaccgca aggatgcgtt
     4621 ccccacggct gcggtgtacg ggcccgtccc tgagaccgcc cttcgcctca tcacctgcgg
     4681 gggcccgttc gaaccggccc tcggggacca ctaccgcgac aatgtcatcg tcttcgccca
     4741 catgaccggc tgggccgcct gatcaggcac ccgccggagg cggcgtcatg ctctggtagt
     4801 gagcgaaggc gatctcgttg tcgcggtaat gccccgtcgc atggtcgaat gaccccccgc
     4861 aggtgatgag ccgcagggtg gcgttgggcg tcgggtcgta gacctcgctg gtcgggaagg
     4921 tgttcttcgg agccgactcc aaccggtcga tcacgaacac gacg
//
LOCUS       DATGJT010000548         2269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_72793, whole genome shotgun sequence.
ACCESSION   DATGJT010000548 DATGJT010000000
VERSION     DATGJT010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72793"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..818
                     /gene="rplC"
                     /locus_tag="VKX24_09460"
     CDS             156..818
                     /gene="rplC"
                     /locus_tag="VKX24_09460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011719143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HLJ08754.1"
                     /translation="MTTKAIVGEKVGMTQVWDDQNRAIPVTVLRVPSVRVVQVKTPEK
                     EGYAALQVTYGFRRRSSLNKPQDGHFQAAGVDPGRRLVELRLDDISDFSVGQQLTADQ
                     WSPGERVDAIAISKGKGFAGAMKRHNFKGQGAAHGNHKHHRAPGSIGACATPSRVFKG
                     TRMAGRLGARRVTALNLQIVSADPERELVLVKGAVPGPRGGMVVLRDTVKGRASTNGS
                     AG"
     gene            815..1546
                     /gene="rplD"
                     /locus_tag="VKX24_09465"
     CDS             815..1546
                     /gene="rplD"
                     /locus_tag="VKX24_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HLJ08755.1"
                     /translation="MSAERTGALRGPIAKDRPAPVTRTATRYDVSGTELGQVDLEPTI
                     FGIEPNRAVLHQVVTAQLAAARSGTHSTRTRAEVRGGGAKPYRQKGTGRARQGSLRAP
                     HFSGGGVAMGPRPRSYGQRTPKKMVRLALASALSDRAEDGRVVLVDRWPWEAPRTKDA
                     VAALEALDLGGRVLAVLGDTDGVADRSFANLPEVDTVRAGELTAYAVLRADWVVFTDA
                     TLPGAGGRRETGGADDSGDEETEDA"
     gene            1539..1829
                     /gene="rplW"
                     /locus_tag="VKX24_09470"
     CDS             1539..1829
                     /gene="rplW"
                     /locus_tag="VKX24_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003948641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HLJ08756.1"
                     /translation="MPDLGNVLLRPVVSEKTYALMDRNVYVFVVHPKASKIEIRQAVE
                     SSFGVKVAQVNTLNRRGKASKNRRTNVGGRRADTKRAFVTLHAGDKIDLFES"
     gene            1837..>2269
                     /gene="rplB"
                     /locus_tag="VKX24_09475"
     CDS             1837..>2269
                     /gene="rplB"
                     /locus_tag="VKX24_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009740525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HLJ08757.1"
                     /translation="MAIRSRKPTSPGRRFQSVADFSEITRDRPERSLTRPLAQSGGRN
                     NYGRKTSRHRGGGHKRLYRVVDFRRDKDGVPAKVAAIEYDPNRGARIALLHYADGEKR
                     YILAPQRLRVGMTVQSGPGVDVRVGNSLPLGNMPSGTVVHNV"
BASE COUNT          358 a          840 c          817 g          254 t
ORIGIN      
        1 gcggataccc gccgcgacca ggggacgtgc tcgagcgccc ggggaatttc ccggggacct
       61 cgggccgaaa cagacgagcg ctccgctcgg gatgaccggg cggagcgttg gcatgcacga
      121 gggcccgtcg gggccgacca cgaaagacgc gcggagtgac gacgaaggcc attgtcggcg
      181 agaaggtcgg catgacccag gtgtgggacg accagaaccg ggccatcccg gtaacggtcc
      241 tgcgcgtccc ctccgtccgg gtggtgcagg tgaagacccc ggagaaggag gggtacgccg
      301 ccctccaggt cacctacggg ttccgccggc ggtcctcgct caacaagccc caggacggcc
      361 acttccaggc ggccggggtc gacccggggc gccgactggt cgagctgcgc ctcgacgaca
      421 tcagcgactt ctcggtcggc cagcagctca cggccgacca gtggagcccg ggcgagcggg
      481 tggacgccat cgccatcagc aagggcaagg gcttcgcggg cgccatgaag cgccacaact
      541 tcaaggggca gggcgcggcc cacggcaacc acaagcacca ccgcgccccg ggctcgatcg
      601 gcgcctgtgc cacgccgtcc cgggtgttca agggcacgcg gatggctggc cgcctcggcg
      661 cccgccgggt gaccgccctc aacctccaga tcgtctcggc cgaccccgag cgcgagctcg
      721 tgctcgtgaa gggagcggtc cccgggccgc ggggcggcat ggtcgtcctg cgcgacaccg
      781 tgaagggccg ggcctcgacc aacgggagcg cggggtgagc gccgagcgca ccggcgcgct
      841 gcggggcccg atcgccaagg atcggccggc accggtgacg cgcacagcca cccgctacga
      901 cgtgtcgggc acggagctcg gccaggtcga cctcgagccg accatcttcg ggatcgagcc
      961 caaccgggcg gtgctccacc aggtggtcac cgcccagctg gccgccgccc gctccggcac
     1021 ccactcgacc cggacccggg ccgaggtccg cggcggcggg gcgaagccct accgccagaa
     1081 gggcacgggc cgggcccggc aggggtcgct tcgggccccc cacttctccg gcgggggcgt
     1141 cgccatgggc ccgaggccgc gcagctacgg ccagcgcacc ccgaagaaga tggtgcgcct
     1201 cgccctcgcc agcgcgctga gcgaccgcgc cgaggacggc cgggtggtgc tggtcgaccg
     1261 ctggccgtgg gaggcgcccc gcaccaagga cgcggtggcg gccctcgagg cgctcgacct
     1321 cggcggccgg gtgctggccg tgctgggcga caccgacggg gtggccgacc gctccttcgc
     1381 caacctcccc gaggtcgaca ccgtgcgtgc cggtgagctc accgcctacg cagtgctccg
     1441 ggccgactgg gtggtgttca ccgacgccac gctgccgggg gccggcggcc gccgcgagac
     1501 cggcggagcg gacgactccg gcgacgagga gaccgaagat gcctgacctc ggcaacgtgc
     1561 tcctgcgccc ggtcgtgtcg gagaagacct acgcgctcat ggaccgcaac gtctacgtgt
     1621 tcgtggtcca ccccaaggcc tccaagatcg agatccgcca ggcggtcgag agctccttcg
     1681 gggtgaaggt cgcccaggtg aacaccctca accgccgggg caaggcgagc aagaaccgcc
     1741 gcaccaacgt cggcggccgg cgcgccgaca ccaagcgggc gttcgtgacg ctgcacgccg
     1801 gcgacaagat cgacctcttc gagagctgag gacaccgtgg ccatccgctc gcgcaagccc
     1861 accagccccg gacgacgctt ccagagcgtc gccgacttct ccgagatcac ccgggaccgc
     1921 ccggagcgct ccctcacgcg tccgttggcc cagagcggcg ggcgcaacaa ctacgggcgc
     1981 aagacctccc gccaccgcgg cggcggccac aagcgcctgt accgggtcgt cgacttccgc
     2041 cgggacaagg acggggtgcc ggcgaaggtg gccgccatcg agtacgaccc caaccgcggt
     2101 gcccgcatcg ccctcctgca ctacgccgac ggcgagaagc gctacatcct ggcgccgcag
     2161 cggctccgag tcgggatgac ggtccagtcg ggaccgggag tcgatgtgcg ggtcggcaac
     2221 agcctgccgc tcggcaacat gccctcgggc acggtggtcc acaacgtcg
//
LOCUS       DATGJT010000549         4610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_483087, whole genome shotgun sequence.
ACCESSION   DATGJT010000549 DATGJT010000000
VERSION     DATGJT010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4610
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483087"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VKX24_09480"
     CDS             <1..619
                     /locus_tag="VKX24_09480"
                     /inference="COORDINATES: protein motif:HMM:NF014874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HLJ08758.1"
                     /translation="DRSGSWRRHDDRLLRPDGVPLVAVTDLARSGPHDVANALAAAAA
                     AAELGASDDAVRQVLTTFSGLPHRVTPVGQSGGVTFVDDSKATNPHAALAALAGFDPV
                     VLVAGGRNKGLDLGVLRREAGRIRAVVAIGEAAGEVEAAFEGLRPVRRAGSMAEAVRL
                     GAELAEPGDTVLLSPACASFDWYTSYAARGDDFAREVRALLEARR"
     gene            616..1896
                     /gene="ftsW"
                     /locus_tag="VKX24_09485"
     CDS             616..1896
                     /gene="ftsW"
                     /locus_tag="VKX24_09485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HLJ08759.1"
                     /translation="MTPADTQTTIARPGGGGRSAGTRRRVVKPKPAAPPPRKERRQVR
                     QSRIGRTIRRGREAWRDGGRLRPSGYYALLATIIVLNLVGLVMVLSSSSVEALANYGS
                     SWLFFKRQLTWTVLGLAGMAVTSRVDYRILRRYVLPLLLVSAGLLMLLLVPGVGVNVD
                     GATRWLGYGAVRFQPSELAKLALLVYCADLLTRRAANVGDWRSVLRPVGLMFCFFGGL
                     VMLQPDMGTTIIMGILTGTILFVGGVRMRHMATVLGAGVGAGAFLAIVEPYRRARLMS
                     FIDPFDHYKEGGYQVAQSLIALGSGGWTGVGLGAGRAKWMFLPNAHTDFIFAVIGEEL
                     GLVGCALVLILFGALAVLGVRTALRAPDRFGQLLAAGITGWIVGQAIINVGAVTGALP
                     VTGVPLPFVSFGGSALLFTMCATGVLLNVARQGR"
     gene            1896..3038
                     /gene="murG"
                     /locus_tag="VKX24_09490"
     CDS             1896..3038
                     /gene="murG"
                     /locus_tag="VKX24_09490"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:TIGR01133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HLJ08760.1"
                     /translation="MPGGSGASPGKTTYALITGGGTGGHVYPGLALAEALVARGHPRD
                     SIVWVGNEGKLEAEAVPQAGFAVVLLPGRGLQRRLTVENVGVALKTAQAFRKARRIVK
                     DHRPAIVVGVGGYASLPCLVAARWQGIPTVVHEQNAAPGLANRIAVRLGARAAVSLPG
                     TPLPDAVVTGNPVRASVVAVERRPSAERPLVAVFGGSLGARRINEAAAGLYDLWRDRG
                     DVAVRHVSGPAGFEAAAAALAGLRREGDRLEWTLRRYEDDMPGLYAATSIAVCRAGAT
                     TVAELAAAGVPSVLVPLPGAPGDHQTRNAEALVSAGAAILVPDAGCTGERLAAELEPL
                     LADPARLEAMGAAARTLARPDAAGDLADLVESTARSGGRGRRKVLA"
     gene            3035..4471
                     /gene="murC"
                     /locus_tag="VKX24_09495"
     CDS             3035..4471
                     /gene="murC"
                     /locus_tag="VKX24_09495"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012853251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HLJ08761.1"
                     /translation="MTLDLSAPRRIHIVGIGGMAMSGIAAVLTRLGHTVSGSDLKAWR
                     GLERLRLMGVDVHVPHDAGCLPAELDAVVVSTAIPPTNPEVMAAREQGVPVLRRAEAL
                     AAIVDTRRTVAISGTHGKTTTSTMTTLILRAAGWHPSFLIGGEPNEVGSNAAYDDGEW
                     LVIEADESDGTFVEIAPEAVVLTNVEPDHLDHYGDMAALEEACARYLASAPGPRVACA
                     DDPGAARLAARVTAGGRPVVTYGDAAGADYRIENYRPLGAGPDRGPEGPRVPSGGFGS
                     RFDLVRRGETLGEIRLPAPGRHNARNAAGAAAVATEIGVPFDAVRAALGRFAGVARRF
                     QFHGEVGGVTLVDDYAHLPGEIKATLSAAREGDWRRIVAVFQPHRYTRTARLWRDFGD
                     AFADADVVVLTDVYAAGEAPQPGVSGRLILQAVCEAHPPGRVLYVPKRADVLALLPEL
                     TRPGDLVVTLGAGDITSLPDEWLRRADA"
BASE COUNT          508 a         1815 c         1680 g          607 t
ORIGIN      
        1 ggaccgctcc ggcagctgga gacggcacga cgaccgcctc ctccgacccg acggcgtccc
       61 gctggtggcg gtgaccgacc tcgcccggag cgggccccac gacgtcgcca acgccctcgc
      121 cgccgcggcg gcggccgccg agctgggggc ctccgacgac gccgtccgcc aggttctgac
      181 aacgttttcg gggctccccc accgcgtgac cccggtaggc caaagtgggg gggtgacctt
      241 cgtcgacgac tcgaaggcga ccaaccccca cgccgccctg gccgccctgg ccggcttcga
      301 cccggtggtc ctggtggcgg gcggccgcaa caagggcctg gacctcggcg tcctccggcg
      361 ggaggccggg cgcatccggg ccgtggtggc catcggggag gcggccggcg aggtcgaggc
      421 ggcgttcgag ggcctccggc ccgtccgccg ggcagggtcc atggccgagg cggtccgcct
      481 cggggcggag ttggccgagc ccggcgacac cgtcctgctc tcgccggcct gcgcctcgtt
      541 cgactggtac acgagctacg ccgcccgggg cgacgacttc gcccgggagg tccgggcgct
      601 cctggaggcc cgacggtgac gccggccgac acgcagacga cgatcgcccg gcccggcggc
      661 ggcggccgct ccgccggcac ccgccggcgc gtcgtcaagc cgaagccggc ggccccgccg
      721 ccccgcaagg agcggcgcca ggtccgccag tcgcggatcg gccgcacgat ccgccggggg
      781 cgggaggcgt ggcgcgacgg cggccggctg cgcccgtccg gctactacgc cctgctggcc
      841 acgatcatcg tcctcaacct cgtcggtctg gtcatggtcc tgtcgtcgtc gtcggtggag
      901 gcgctggcca actacgggtc gtcgtggctg ttcttcaagc gccagctgac ctggacggtg
      961 ctcggcctgg ccgggatggc cgtcacctcc cgggtcgact accggatcct gcgccgctac
     1021 gtcctgccgc tcctgctggt gtcggccggt ctgctcatgc tgctcctggt gccgggcgtc
     1081 ggcgtcaacg tcgacggggc gacccggtgg ctgggctacg gcgccgtccg cttccagccc
     1141 tcggagctgg ccaagctggc gctgctcgtc tactgcgccg acctgctcac ccggcgggcg
     1201 gccaatgtcg gcgactggcg gtcggtgctc cggccggtcg gcctgatgtt ctgcttcttc
     1261 ggcgggctcg tcatgctcca gcccgacatg gggacgacga tcatcatggg catcctcacc
     1321 ggcacgatcc tcttcgtcgg cggcgtgcgg atgcgccaca tggccacggt cctcggcgcc
     1381 ggcgtggggg cgggggcctt cctggccatc gtcgagccct accggcgggc ccggctcatg
     1441 tcgttcatcg accccttcga ccactacaag gagggcggct accaggtcgc ccagtcgctc
     1501 atcgccctcg gcagcggcgg gtggaccggc gtcggcctcg gcgccggccg ggccaagtgg
     1561 atgttcctgc ccaacgccca caccgacttc atcttcgccg tcatcggcga ggagctcggg
     1621 ctcgtcggct gcgccctcgt cctcatcctc ttcggggccc tggcggtgct cggcgtgcgg
     1681 acggcgctgc gggcccccga ccggttcggc cagctcctgg cggcggggat caccggctgg
     1741 atcgtgggcc aggcgatcat caacgtcgga gcggtgaccg gcgccctgcc ggtgacgggc
     1801 gtgccgctgc cgttcgtgtc cttcggcggc tccgcactgc tgttcacgat gtgcgccacc
     1861 ggggtgctgc tcaacgtcgc ccggcagggc cggtgatgcc cgggggctcg ggggcgtccc
     1921 ccggaaagac gacgtacgcc ctcattaccg gcggcgggac gggcggccac gtctacccgg
     1981 gcctggccct ggccgaggcg ctggtggccc gcggccatcc ccgggactcc atcgtctggg
     2041 tcggcaatga aggcaagctg gaggccgagg cggtgccgca ggcgggcttc gccgtcgtcc
     2101 tcctcccggg gcgggggctc cagcggcgcc tcaccgtcga gaacgtcggc gtggctctca
     2161 agacggcgca ggctttccgg aaggcccggc ggatcgtgaa ggaccaccgg ccggcgatcg
     2221 tcgtgggcgt cggcgggtac gcctcgctgc cctgcctggt cgccgcccgg tggcagggga
     2281 tcccgaccgt ggtccacgag cagaacgccg ctcccgggct ggccaaccgc atcgccgtgc
     2341 ggctcggcgc ccgggcagcc gtgtcgctgc cgggcacgcc gctgcccgat gccgtcgtga
     2401 ccggcaaccc ggtgcgggcc tcggtcgtcg ccgtcgaacg tcgcccgtcg gccgagcggc
     2461 cgctggtggc ggtcttcggc ggcagcctcg gcgcccgccg gatcaacgag gcggccgccg
     2521 ggctctacga cctgtggcgg gacagaggcg acgtcgccgt ccgccacgtg agcggcccgg
     2581 cgggcttcga ggcggccgcc gcggcgctgg ccgggctgcg ccgcgagggc gaccgcctgg
     2641 agtggacgct acgccgctac gaggacgaca tgccgggcct ctacgccgcc acgtcgatcg
     2701 ccgtctgccg ggccggggcg accacggtgg cggagctggc cgccgccggc gtcccgtcgg
     2761 tcctggtccc gctgcccggt gccccgggcg accaccagac ccgcaacgcc gaagccctgg
     2821 tgtcggccgg ggcggcgatc ctcgtccccg acgccgggtg caccggcgag cggctggccg
     2881 ccgagctcga accgctgctg gccgaccccg cccggctcga ggccatgggg gccgccgccc
     2941 gcacgctggc ccgccccgac gccgccggcg acctggccga cctcgtcgag tcgaccgccc
     3001 ggtccggcgg ccggggccgg cggaaggtcc tggcatgacc ctcgacctga gcgccccccg
     3061 gcgcatccac atcgtcggca tcggcgggat ggccatgagc gggatcgccg ccgtcctcac
     3121 ccggctgggc cacacagtga gcggctccga cctcaaggcc tggcgggggc tggagcggct
     3181 gcggctgatg ggtgtcgacg tccacgtccc ccacgacgcc ggctgcctgc cggccgagct
     3241 cgacgccgtc gtcgtctcga ccgccatccc gcccaccaac cccgaggtca tggccgcccg
     3301 ggagcagggc gtgccggtgc tgcggcgggc cgaggccctg gcggccatcg tcgacacccg
     3361 ccgcacggtg gccatctccg gcacccacgg caagacgacg acgtcgacga tgaccacgct
     3421 gatcctgcgc gccgccggct ggcacccgtc gttcctgatc ggcggggagc ccaacgaggt
     3481 cggcagcaac gccgcctacg acgacggcga gtggctggtg atcgaggccg acgagagcga
     3541 cggcacgttc gtcgagatcg cccccgaggc cgtcgtactg accaacgtcg agcccgacca
     3601 cctcgaccac tacggcgaca tggccgccct cgaggaggcc tgcgcccgct acctggcctc
     3661 ggcccccggg ccccgggtgg cctgcgccga cgaccccggc gccgcccggc tcgccgcccg
     3721 ggtcaccgcc ggcggacggc cggtcgtgac ctacggcgac gccgccggcg ccgactaccg
     3781 catcgagaac taccgcccgc tcggggccgg ccccgaccgc ggccccgagg gtccgcgtgt
     3841 gccctccgga gggttcggca gccggttcga cctcgtccgg cggggcgaga cgctgggcga
     3901 gatccggctc cccgccccgg gacggcacaa cgcccgcaac gccgccggcg ccgccgccgt
     3961 ggccaccgag atcggcgtcc cgttcgacgc cgtccgggcc gccctcggcc gcttcgccgg
     4021 cgtcgcccgc cgcttccagt tccacggcga agtcggcggc gtcaccctcg tcgacgacta
     4081 cgcccacctg cccggcgaga tcaaggccac gctctcggcc gcccgggagg gcgactggcg
     4141 ccgcatcgtg gcggtcttcc agccccaccg ctacacccgc acggcccggc tgtggcgcga
     4201 cttcggcgac gccttcgccg acgccgacgt cgtcgtcctg accgacgtct acgccgccgg
     4261 ggaggcgccc cagcccggcg tctccggccg gctgatcctc caggcggtgt gcgaggccca
     4321 ccctcccggc cgggtgctgt acgtgccgaa gcgggccgac gtcctcgccc tgctgcccga
     4381 gctcacccgg cccggcgatc tcgtcgtcac cctcggagcc ggggacatca cgtcgctccc
     4441 cgacgagtgg ctccgccggg ccgacgcatg agcgagccgc cgctcgacga cgtcgccgtc
     4501 cggttggagg cggccctcgg ccggccggtg gagcgcgacg tccccttcgc ctcgctcacc
     4561 acctacggcc tcggcgggcc ggccgccgtc ctcgtccgga tccgggagga
//
LOCUS       DATGJT010000550         2158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1520149, whole genome shotgun sequence.
ACCESSION   DATGJT010000550 DATGJT010000000
VERSION     DATGJT010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520149"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VKX24_09500"
     CDS             <1..198
                     /locus_tag="VKX24_09500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013173045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08762.1"
                     /translation="LGPAPIRFDSAGDHRLAMAALVGAMGGGGGTVSGVEAIVTSYPG
                     FLDDLDRLAGEGAWEPEPDAR"
     gene            195..821
                     /gene="cmk"
                     /locus_tag="VKX24_09505"
     CDS             195..821
                     /gene="cmk"
                     /locus_tag="VKX24_09505"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019122480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HLJ08763.1"
                     /translation="MTGHDRRPPLIAIDGPAGAGKSTVSKAVAARLGLDRLDTGAMYR
                     SVAWEVLREGIAPDDETAVAKVARHATIEVGAAVTMNGTDVTDAIRSPEVSRAVSVVA
                     ANPAVRAEMVKRQRAWAEGRPGGVVEGRDIGSVVFPEATVKVYLTASAEERARRRGGD
                     EPADGVARRDLLDSTRSASPLTVAADAHVLDTTGRSVEDVVGEVLSWL"
     gene            812..1537
                     /locus_tag="VKX24_09510"
     CDS             812..1537
                     /locus_tag="VKX24_09510"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLJ08764.1"
                     /translation="MAVSEPGAAGEPVDGATGAGAAARRAAAFTVDPRRSPAYRAARA
                     IVLGILRLWFRPEIRGLDKVPRTGPVLIAPLHRSNIDFGFTGLLTPRKLFYMAKEELW
                     KYGWFGRLLEWLGAFPVNRSGADRESVRRAEEVLRQGEVLVMFPEGARRFGDTVEPLQ
                     EGVAFLAARTGAPILPVGIAGSERAMPKGAKFPKPYKVTVSIGDLIDVEARDGRRVAR
                     SEVHRLSELLRERLQAAYDDAAR"
     gene            complement(1516..>2158)
                     /locus_tag="VKX24_09515"
     CDS             complement(1516..>2158)
                     /locus_tag="VKX24_09515"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLJ08765.1"
                     /translation="GLPVAPLVVVDGGEDDTAKVSLGAGAMTCVFPTNLGHGVALQVG
                     YRLCIDGGARYVVTLDADGQNDPGELPGLLEPLVDGSSDFVVASRRLGVDETSDQVRR
                     TGVVVFAWLMNRLTGSELTDTSNGFRALRTEVLADVVDRLQQRQYQTAELLITAISRG
                     WRVSERPTVWRPRASGNSKKGSNLFFGFRYASVVLGTWLRERGGRPAQRAASS"
BASE COUNT          274 a          795 c          831 g          258 t
ORIGIN      
        1 ctcgggccgg cgccgatccg cttcgacagc gccggcgacc accgcctggc catggccgcg
       61 ctcgtcgggg ccatgggcgg cgggggcggc accgtctcgg gggtggaggc gatcgtcacc
      121 agctacccgg ggttcctgga cgacctcgac cggctcgccg gggagggcgc gtgggagccg
      181 gaaccggacg cccggtgacc ggccacgacc ggcggccgcc gctcatcgcc atcgacggcc
      241 cggccggcgc cggcaagtcg acggtctcga aggcggtggc cgcgcgcctc ggcctcgacc
      301 ggctcgacac gggcgccatg taccggtcgg tcgcctggga ggtcctccgg gagggcatcg
      361 cccccgacga cgagacggcg gtggccaagg tcgcgcggca cgcgaccatc gaggtcggcg
      421 cggccgtgac catgaacggc accgacgtca ccgacgccat ccgcagcccc gaggtctccc
      481 gggcggtctc ggtcgtggcc gccaacccgg ccgtacgggc ggagatggtg aagcgccagc
      541 gggcgtgggc ggagggccgg ccggggggcg tggtcgaggg ccgggacatc ggcagcgtgg
      601 tcttccccga ggcgacggtg aaggtctacc tcaccgcctc ggccgaggag cgggcccgcc
      661 ggcggggggg cgacgagcca gcggacgggg tggcccggcg cgacctcctc gactcgacgc
      721 ggtcggcctc gccgctcacc gtcgccgccg acgcccacgt gctcgacacg accgggcgga
      781 gcgtcgagga tgtcgtcggg gaggtcctgt catggctgtg agcgagcccg gggcggccgg
      841 ggagccggtc gatggggcga cgggtgcggg ggccgcggcg cggcgcgccg ccgccttcac
      901 cgtcgacccg cggcggagcc ccgcctaccg ggcggcccgg gcgatcgtcc tcggcatcct
      961 ccgcctgtgg ttccggcccg agatccgcgg cctcgacaag gtgccgagga ccggcccggt
     1021 gctcatcgcc ccgctgcacc ggtccaacat cgacttcggg ttcacggggc tgctgacccc
     1081 gcgcaagctc ttctacatgg cgaaggagga gctctggaag tacgggtggt tcggccgcct
     1141 gctcgagtgg ctgggcgcct tcccggtgaa ccgctccggc gccgaccgcg agtcggtgcg
     1201 ccgggccgag gaggtgctcc gccaggggga ggtgctggtc atgttccccg agggcgcccg
     1261 gcgcttcggc gacaccgtcg agcccctcca ggagggggtg gccttcctcg ccgcccggac
     1321 cggcgcgccg atcctgcccg tcggcatcgc cggcagcgag cgggccatgc ccaagggagc
     1381 gaagttcccc aagccctaca aggtcaccgt gtcgatcggc gacctgatcg acgtcgaggc
     1441 ccgggacggc cggcgcgtcg cccgcagcga ggtccaccgg ctgtccgagc tgttgcggga
     1501 gcgcctccag gccgcctacg acgacgccgc ccgctgagcg ggccggccgc cccgctcccg
     1561 gagccacgtg ccgagcacga cgctcgcgta gcggaagccg aagaagaggt tcgagccctt
     1621 cttcgagttg cccgaggccc gcggccgcca gacggtcggc cgctcgctca cccgccagcc
     1681 ccgcgagatg gcggtgatga gcagctcggc ggtctggtac tggcgctgct gcagccggtc
     1741 gacgacgtcg gccagcacct cggtgcgcag cgcccggaac ccgttcgagg tgtcggtgag
     1801 ctccgagccg gtgagccggt tcatgagcca ggcgaacacg accaccccgg tccggcgcac
     1861 ctggtcgctc gtctcgtcga cgccgaggcg gcgcgacgcc accacgaagt ccgaggagcc
     1921 gtcgaccagg ggctcgagca gcccgggcag ctcgcccggg tcgttctggc cgtcggcgtc
     1981 gagggtcacg acgtagcgcg cccccccgtc gatgcacagc cggtagccga cctggagggc
     2041 gaccccgtgg ccgaggttgg tggggaagac gcaggtcatc gcgccggcgc cgagcgacac
     2101 cttcgccgtg tcgtcctcgc cgccgtcgac cacgacgagg ggggcgaccg gcaacccg
//
LOCUS       DATGJT010000551         2051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_693854, whole genome shotgun sequence.
ACCESSION   DATGJT010000551 DATGJT010000000
VERSION     DATGJT010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693854"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VKX24_09520"
     CDS             <1..300
                     /locus_tag="VKX24_09520"
                     /inference="COORDINATES: protein motif:HMM:NF017778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine dioxygenase"
                     /protein_id="HLJ08766.1"
                     /translation="GGSSGAICVVEGILTETFVDAGDGLTAGGSLRRRRLPTGTLVPF
                     GPGHIHDVVNNSSRLALSIHLYSPRLRSMTFYDHGPGSVLSAVRTEHSEPGALLV"
     gene            327..749
                     /locus_tag="VKX24_09525"
     CDS             327..749
                     /locus_tag="VKX24_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014139257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLJ08767.1"
                     /translation="MPTTVDDLLASARTRIRRLDPPGAAAARQRGAMLIDIRAAAQRH
                     RDGEIPGALIVERNVLEWRLDPNSAHRLPEVTDHARELIVVCSEGYASSFAAASLVDL
                     GFASAADLDGGFKAWEAAGFPVRKVAQVGDPRRTITTT"
     gene            746..982
                     /locus_tag="VKX24_09530"
     CDS             746..982
                     /locus_tag="VKX24_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08768.1"
                     /translation="MNGQLELARPDRHPVEDVPPVRRTLVQRFGDWADPEVGGVGTAG
                     AVARAVVCVLLCLLATLVIVGALTGLVVAIGSIA"
     gene            complement(990..1469)
                     /locus_tag="VKX24_09535"
     CDS             complement(990..1469)
                     /locus_tag="VKX24_09535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08769.1"
                     /translation="MAIIELGTDTGAAPLDIEADRFSVEPAAAPPPPAPATRHRELGD
                     ELSGGWALFLTVAWIVVFTLGAALEPAPANPDAMPFLAGVLATGLMGGWLVMAAGFAQ
                     HRRYGAAGSLGAAGVLAAMTVACPLSGHHAGIGAWWWFQVAGSLSLLAASRAALRAA"
     gene            1572..2036
                     /locus_tag="VKX24_09540"
     CDS             1572..2036
                     /locus_tag="VKX24_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ08770.1"
                     /translation="MAAAIPAGLEGRIVPYLMIDGAARAIDFYTEAFGAEERYRLPMP
                     GGRIGHADIVVNGATVYLSDAPDDMPGDAGNPKKLGGTTVLLHQYVADVDAAVARAEA
                     AGATVLRPPEDQFYGDRAALVVDPFGHQWSLHSHVRDVSPEEMAQAVAAMGG"
BASE COUNT          285 a          778 c          729 g          259 t
ORIGIN      
        1 ggcgggtcgt cgggggccat ctgcgtggtg gaagggatcc tgacggagac gttcgtcgac
       61 gccggagacg ggctgacggc cggcgggtcc ctgcgccggc gtcgcctgcc gaccgggacc
      121 ctcgtgccct tcgggcccgg ccacatccac gacgtcgtga acaacagttc gcggctggct
      181 ctcagcatcc acctctactc cccccggctc cgatccatga ccttctacga ccacggcccc
      241 ggctcggtcc tctccgcggt gcggacggaa cacagcgagc ccggcgcact cctcgtgtga
      301 gccaccgacc aggaaggaga ccgaacgtgc ccaccaccgt ggacgacctg ctcgcctcgg
      361 cccggacgcg catccggcgc ctcgatcccc ccggcgcggc cgccgcccgg cagcggggcg
      421 cgatgctcat cgacatccgg gcggccgccc agcgtcaccg cgacggagag atccccgggg
      481 cgctcatcgt ggagcgcaac gtgctcgaat ggcggctcga cccgaacagc gcccaccggc
      541 tgcccgaggt caccgaccac gcccgggagc tgatcgtcgt gtgctccgag ggctacgcct
      601 cgagcttcgc cgccgcctcg ctggtcgatc tcggattcgc ctccgccgct gacctcgacg
      661 gcggcttcaa ggcgtgggag gcggccggtt tccccgtccg aaaagtcgct caggtcggcg
      721 acccgaggcg gacgataacg acgacatgaa cggacaattg gaactcgccc gccccgatcg
      781 gcaccccgtc gaggacgtcc ccccggtccg ccggacgctc gttcaacgct tcggcgactg
      841 ggccgatccc gaggtcgggg gcgtcggaac ggccggcgcc gtcgcccggg ccgtggtctg
      901 cgtgctcctc tgcctgttgg cgaccctcgt gatcgtcggc gccctcaccg ggctcgtggt
      961 ggcgatcggc tcgatcgcct aggtgtagat caggcggccc gcagggccgc ccggctggcg
     1021 gccagcagcg acagcgagcc ggcgacctgg aaccaccacc aggcgccgat tccggcgtgg
     1081 tggccggaga gcgggcaggc cacggtcatg gcggcgagga cgccggcggc gccgagcgac
     1141 ccggcggcgc cgtaccggcg gtgctgggcg aacccggccg ccatcaccag ccacccgccc
     1201 atgagcccgg tggcgaggac gccggccagg aagggcatgg cgtcgggatt ggccggggcc
     1261 ggctcgagcg ccgccccgag cgtgaagacc acgatccagg cgacggtgag gaacagcgcc
     1321 catcccccgc tcagctcgtc gccgagctca cggtggcggg tcgccggtgc gggcggcgga
     1381 ggtgcggcgg cgggctcgac ggagaaccgg tcggcctcga tgtccagcgg agcggcgccg
     1441 gtgtcggtgc cgagctcgat gatcgccatg gtccctcctc gggtcgggcc ccagtgttcc
     1501 acgcccgtgc ctaccctacg ctccgaccgg tcaccacggt cattcccccc gaggcgaagg
     1561 aggaccatcc gatggccgca gcgatcccgg ccggactcga gggccgcatc gtgccctacc
     1621 tgatgatcga cggcgccgcc cgggcgatcg acttctacac ggaggccttc ggcgccgagg
     1681 agcgctaccg gctgccgatg cccggcggga ggatcggcca cgccgacatc gtcgtcaacg
     1741 gcgccaccgt ctacctctcc gacgcccccg acgacatgcc cggcgacgcc ggcaacccga
     1801 agaagctcgg gggaaccacc gtcctgctcc accagtacgt ggccgacgtc gacgccgcgg
     1861 tggcccgggc cgaggcggcc ggcgccaccg tgctgcggcc gccggaggac cagttctacg
     1921 gcgaccgggc cgccctcgtc gtcgacccct tcggccacca gtggtcgctg cacagccacg
     1981 tccgcgacgt cagcccggag gagatggcgc aggcggtcgc cgcgatgggc ggttgaggcg
     2041 ccggcggtcg c
//
LOCUS       DATGJT010000552         2681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_73387, whole genome shotgun sequence.
ACCESSION   DATGJT010000552 DATGJT010000000
VERSION     DATGJT010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73387"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2412
                     /locus_tag="VKX24_09545"
     CDS             <1..2412
                     /locus_tag="VKX24_09545"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08771.1"
                     /translation="FVEAIDVHADLVPGSELRRDLGEAAGIVAQLVPAVRRVLPEASA
                     AAVPPEEERHRLLDGIGRFLVRRSRRVPLAVLLDDLHWADRSTVALLRHLVRLAATER
                     LLLIGTYRDVDLDRAHPLTDALAAWPREAAYEQLRLDGLDGEEVSAFLSVNSGQDVPL
                     DAGMAWAAETGGNPFFILELLRHLHEEGKLYRGADGRWTVAAPLRDLALPVAARDVAL
                     RRVSRLSDDARRLLGVASAFEGAFRFEMVADLAGLSEESGLDALEEAVGARILEPSGD
                     TESYAFTHAVIRHALYDGVVPSRRSRLHRRVAEALEGAATATPAEIAVHYHRSVALPG
                     AERGVAPALEAADLAQATGAYDEAAKFLRLALDLAPGTDPRRPALLGRLGIVLAWALD
                     FDDAVDVAAEAGDAIAQTETKQAAAQYLADAAYAVASAGGIVPAWQLARQGLTYAGAR
                     DVAWARLTCFDHQRREAEDPDEPGIPIDSAERREAAAILRAAGLDPLGPGPMEAACES
                     RQELLDISNLVVRGSWLGEYERVLPAVMAEARDAEGLGRLARAARAFGQAALFQVALG
                     DLSEARRSLERAGALSVRLGTPIPTVIWSQHLLCLVVDEGWEQVEGTFAFLAATDDPA
                     LVWARGFVYGVEAQIAARRGDPEKAVDAVQRLLPWLERAPAWTVGLSIAAYGAAEALW
                     LLERFDHAEAVERALRVKIIPADFRFGVDGRLTLARLCALTGRHDEAQQWFADARRRL
                     EEEGSRPMRAVCDFDEALMFARRAGVGDAGRARPLLAAARRQFDDIGMTGWLRRADEV
                     EGQIV"
     gene            2454..>2681
                     /locus_tag="VKX24_09550"
     CDS             2454..>2681
                     /locus_tag="VKX24_09550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08772.1"
                     /translation="MDDGRYAAIEPWIDVPVPSAAARLVAEAGPRAPDEEAMEQVRLA
                     PLGARFDLERRLKEGNGVETYAGTDTVDGSPV"
BASE COUNT          329 a         1012 c          983 g          357 t
ORIGIN      
        1 ttcgtcgagg cgatcgacgt ccacgccgac ctcgttccgg ggagtgagct ccggcgcgac
       61 ctcggggagg ccgccgggat cgtcgcccag ctggttccgg ccgtccggcg ggtcctgccc
      121 gaggccagcg ccgcggcggt cccgccggaa gaggagcggc accgcctgct cgacggcatc
      181 ggccgcttcc tggtgaggcg gtcccgccgg gtccccctgg ccgtgctcct cgacgatctc
      241 cactgggccg accgcagcac cgtcgccctg ctccggcatc tcgtccgcct ggccgccacc
      301 gaacggctcc tgctgatcgg cacctaccgg gacgtcgacc tcgaccgggc ccacccgctg
      361 accgacgccc tggccgcctg gccccgggag gcggcctacg agcagctgcg cctcgacggc
      421 ctcgacggcg aggaggtcag cgccttcctg tccgtgaact ccggccagga cgtaccgctc
      481 gacgccggta tggcctgggc ggcggagacc ggcggcaacc ccttcttcat cctcgagctc
      541 ctccgccacc tccacgagga agggaagctc taccgcggcg ccgacggccg ctggacggtg
      601 gccgcgccgc tgcgggacct ggccctcccc gtggccgccc gggacgtggc cctccggcgg
      661 gtctcccggc tgtcggacga cgcccgccgg ctgctcgggg tggcgtccgc cttcgagggt
      721 gcgttccggt tcgagatggt ggccgacctg gccgggctgt ccgaggagag cgggctcgat
      781 gccctcgagg aggcggtcgg cgcccggatc ctggaaccgt ccggcgacac cgagagctac
      841 gccttcaccc acgccgtcat ccgccacgcc ctctatgacg gtgtggtgcc ctcccgccga
      901 tcgcggctcc accggcgggt ggccgaggcg ctggaggggg cggcgacggc gacgccggcc
      961 gagatcgccg tgcactacca ccgcagtgtc gccctgcccg gcgcggagcg aggggtcgct
     1021 ccggccctcg aagccgccga cctggcccag gcgaccgggg cctacgacga ggcggccaag
     1081 ttcctccgcc tggctctcga cctggcgccc ggcaccgacc ctcgccgtcc ggcgctcctc
     1141 ggccgcctgg ggatcgtcct ggcctgggcg ctggacttcg acgacgccgt cgacgtggcc
     1201 gccgaagccg gcgacgccat cgcccagacc gagaccaaac aggccgcggc gcagtacctg
     1261 gccgacgccg cctacgccgt cgcctcagcc ggcgggatcg tcccggcgtg gcaactggcc
     1321 cgccagggcc tcacctacgc cggcgcccgc gacgtcgcct gggcccggct gacctgcttc
     1381 gaccaccagc gccgcgaagc ggaagatccc gacgagccgg gcatccccat cgacagcgcc
     1441 gaacgccggg aggcggccgc cattctccgg gcggccggtc tcgacccgct gggtccgggc
     1501 ccgatggagg cggcgtgcga gagccggcag gagctgctgg acatctcgaa cctcgtcgtc
     1561 cggggctcct ggctcgggga atacgaacgg gtcctgcccg ccgtcatggc cgaagcccgc
     1621 gacgccgaag ggctcggccg gctggcccgg gcggcgcggg ccttcggcca ggccgccttg
     1681 ttccaggttg ccctgggcga tctctccgag gcccgccggt cactggagcg cgccggcgcc
     1741 ctgtcggttc ggctggggac gcccatcccc acggtcatct ggtcccagca cctcctgtgt
     1801 ttggtggtcg atgaagggtg ggagcaggtc gaaggcacct tcgccttcct ggccgccacc
     1861 gacgacccgg cgctggtctg ggcccgcggt ttcgtctacg gcgtcgaggc ccagatcgcc
     1921 gcccgccggg gcgacccgga gaaggccgtc gacgccgtcc agcgcctgct gccctggctc
     1981 gagcgggccc ccgcttggac agtgggtctc tcgattgcgg cctatggggc ggcggaggcg
     2041 ctgtggctgc tcgagcgctt cgaccacgcg gaggccgttg aacgggccct gcgggtgaag
     2101 atcatcccgg ccgacttccg cttcggggtc gacgggaggc tgacgctggc gcggctctgc
     2161 gccctcaccg ggcgccacga cgaggcgcag caatggttcg ccgacgcccg ccgccggctg
     2221 gaggaggaag ggtcacgacc gatgcgggcc gtctgcgact tcgacgaggc gctgatgttc
     2281 gcccgccggg ccggcgtcgg cgacgccggc cgggcccgcc cgctgctggc cgccgcccgg
     2341 cggcagttcg acgacatcgg gatgaccggc tggctccgcc gggccgacga agtcgaaggc
     2401 cagatcgtct gagacgaact tccgaaagcg gtgcatacct catacgggac cgggtggacg
     2461 acggccggta cgcggcgatc gagccttgga tcgacgtgcc ggtgccgtcc gcggcggcaa
     2521 ggctggtggc cgaggcgggc ccgcgagccc cggacgagga ggccatggag caggtcaggt
     2581 tggcgccgct cggcgctcgg ttcgacctgg agcgccgcct gaaggaaggc aacggcgtcg
     2641 agacctacgc gggaaccgac accgtcgacg gctcgccggt g
//
LOCUS       DATGJT010000553         2757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1211049, whole genome shotgun sequence.
ACCESSION   DATGJT010000553 DATGJT010000000
VERSION     DATGJT010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1211049"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..835)
                     /locus_tag="VKX24_09555"
     CDS             complement(<1..835)
                     /locus_tag="VKX24_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010273381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLJ08773.1"
                     /translation="MSGATGAGATGTGHEAGRGAGRRAGNGVPGTVFDLSAPGRRASS
                     LPPPGVDATPAEAIPPSLRRTVPPRLPEVSELDLVRHYTKLSQQNWAIDVGVYPLGSC
                     TMKYNPKVHEEVASLPGFRNLHPWQPEAQVQGALQLLWEMERFLAELTGMARVTFQPA
                     AGAQGEMTGLLMMRAFHAAAGDPRKVVLIPDSAHGTNPASVTHAGFAVRQVPSDLRGL
                     VDLDALRAALDESVAGLMLTNPNTLGLFERDIEAIAAAVHRAGGLLYFDGANFNAICG
                     MV"
     gene            complement(832..2181)
                     /gene="gcvPA"
                     /locus_tag="VKX24_09560"
     CDS             complement(832..2181)
                     /gene="gcvPA"
                     /locus_tag="VKX24_09560"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014464491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HLJ08774.1"
                     /translation="MDYTPHTTEDIEAMLATIGVAGIDDLFAPIPESVRLRRPLSLPG
                     GLSEPEVVAAMAGLAARNIPVDTLTCFAGGGAYDHYVPAVVRHLAYRAEFATSYTPYQ
                     PELSQGVLGALFEFQSMICELTGMDVANASLYDGASALVEAVNLATSATGRRRVVVSG
                     GLNPNYRQVLATMGAGPGWELSTAPLGDGVTRVPPAGELGQAACLVVAHPNFLGSLED
                     LPAAAEASHNAGAMLIVVFDPTAAGILEAPGALGADVVVGEGQALGTGLNFGGPYLGL
                     FATRSEHVRRVPGRIVGATVDVAGRGGFVLTLQAREQHIRRDKATSNVCTNQTLMAIA
                     ATVYLSWLGPAGLAELGECCLARARYAAELASSVPGCSLASPAPFFKEFALRLPGRAS
                     AVVAAMAERGYLIGPSLEVLDPALADCLLVAVTERRSPEEIEGLCKALSEVVTGAPA"
     gene            complement(2238..>2757)
                     /locus_tag="VKX24_09565"
     CDS             complement(2238..>2757)
                     /locus_tag="VKX24_09565"
                     /inference="COORDINATES: protein motif:HMM:NF020253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HLJ08775.1"
                     /translation="VPAADAEVVWDRLIEAGAPFGILPIGLGARDTLRLEMGYPLHGH
                     ELSVDINPVEAAMSWAVDWNKPDFRGKTALEPIRAAGPGRKLVGLSVDGPGIPRAGQA
                     IHTAEPGGPEVGQVTSGNFSPTLRRGIALGFVAASASAPGTMLTVDVRGKRVPVTVTR
                     PPFVPRGRAAAS"
BASE COUNT          370 a          974 c         1058 g          355 t
ORIGIN      
        1 gcaccatccc gcagatggcg ttgaagttcg ccccgtcgaa gtagagcagg ccgccggcgc
       61 ggtggacggc ggcggcgatc gcctcgatgt cccgctcgaa gagccccagc gtgttcgggt
      121 tggtcagcat caggcccgcc accgactcgt cgagcgccgc ccggagggca tcgaggtcga
      181 cgaggccccg caggtcggag ggaacctggc gcaccgcgaa gccggcgtgg gtgacgctgg
      241 ccgggttggt gccgtgggcg gagtcgggga tcagcacgac cttgcgggga tctcccgcgg
      301 cggcgtggaa cgcccgcatc atcagcaggc cggtcatctc gccctgggcg ccggcggccg
      361 gctggaaggt cacccgggcc atgccggtca actcggcgag gaaccgctcc atctcccaca
      421 gcagctgcag cgccccctgg acctgggcct cgggctgcca cgggtggagg ttgcggaagc
      481 cagggaggga ggcgacctcc tcgtgcacct tggggttgta cttcatggtg caggaaccca
      541 gcgggtaaac gccgacgtcg atcgcccagt tctgctgcga cagcttggtg tagtggcgga
      601 cgaggtcgag ttcggagacc tcggggagcc ggggtggcac ggtgcgccgc aacgacggcg
      661 ggatcgcctc ggccggtgtg gcgtcgaccc ctggcggggg gagcgacgag gcccgccgcc
      721 ccggggcgga gaggtcgaag acggttccgg ggaccccgtt acccgcccgg cgcccggccc
      781 cacgcccggc ctcgtgcccg gtaccggtgg cgccggcccc ggtggcgcca ctcatgccgg
      841 ggctccggtg acgacctcgc tgagcgcctt gcacaggccc tcgatctcct cggggctgcg
      901 gcgctcggtg accgcgacca gcaggcagtc ggcgagggcc gggtcgagca cctcgagcga
      961 cgggccgatc aggtagccgc gctcggccat cgccgcgacg accgcgctgg cccggccggg
     1021 caggcgtagg gcgaattcct tgaagaacgg cgccggcgag gccaggctgc acccgggcac
     1081 ggacgaggcg agctcggcgg cgtagcgggc gcgggccagg cagcactcgc cgagttcggc
     1141 gaggccggcc ggaccgagcc aggagaggta caccgttgcg gcgatcgcca tcagcgtctg
     1201 gttggtgcac acgttcgagg tggccttgtc ccgccggatg tgctgctccc gggcctggag
     1261 ggtgaggacg aacccgcccc gcccggcgac gtcgacggtg gcgccgacga tgcgcccggg
     1321 tacccgccgg acgtgctcgg accgggtggc gaacaggccg aggtacgggc cgccgaagtt
     1381 gaggccggtc ccgagcgcct gaccttcacc gacgaccacg tcggccccga gcgccccggg
     1441 ggcctcgagg atcccggcgg cggtcgggtc gaacaccacg atcagcatcg ccccggcgtt
     1501 gtgcgacgcc tcggctgcgg cgggaagatc ctccagcgac ccgaggaagt tcgggtgggc
     1561 gacgaccagg caggcagcct gcccaagctc cccggcgggc ggcacccggg tgaccccgtc
     1621 gccgaggggg gccgtcgaga gctcccagcc cggcccggcc cccatcgtcg ccaggacctg
     1681 gcggtagttc gggttcagcc cgccgctcac gacgaccctc cgccgcccgg tggcgctggt
     1741 cgccaggttg accgcctcga ccagggcgct ggccccgtcg tacaggctgg cattggcgac
     1801 gtccatcccg gtcagctcgc agatcatcga ctggaactcg aacagcgccc cgagcacgcc
     1861 ctgtgacagc tccggctggt agggggtgta ggaggtggcg aactccgccc ggtaggcgag
     1921 atgccggacg acggccggga cgtagtggtc gtaggcgccc ccgccggcga agcaggtgag
     1981 cgtgtcgacc gggatgttgc gggcggccag gccggccatg gcggcgacga cctcgggttc
     2041 ggacagcccg ccgggcaggg acagcggccg gcggaggcgg accgactcgg ggatcggggc
     2101 gaaaaggtcg tcgatgccgg cgacgccgat cgtcgcgagc atcgcctcga tgtcttctgt
     2161 ggtgtgcggc gtgtagtcca tcgggtgctc ctcccctgcg cgcccgcccg ggtttcctcc
     2221 cgggctccgt gccggcgcta cgacgcggcg gcccgccccc gagggacgaa gggcggccgg
     2281 gtcacggtga ccggtacccg cttgccgcgc acgtcgacgg taagcatcgt acctggggcc
     2341 gacgcgctgg ccgcgacgaa tccgagggcg atcccccgcc ggagcgtcgg ggagaagttg
     2401 ccgctggtca cctggccgac ctcgggtccg cccggctcgg ccgtgtggat cgcctggccc
     2461 gcccgcggga tcccgggtcc gtcgacgctc aggcccacca gcttccggcc agggccggcg
     2521 gcccggatcg gctccagggc ggtcttgccc cggaagtccg gcttgttcca gtccaccgcc
     2581 caggacatgg ctgcctccac cgggttgatg tcgaccgaca gttcgtggcc gtgcagcggg
     2641 tagcccatct ccaggcggag cgtgtcccgg gcgcccaggc cgatgggcag gatgccgaac
     2701 ggggcgccgg cctcgatcag gcggtcccac accacctcgg cgtcggcggc ggggacg
//
LOCUS       DATGJT010000554         2456 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_590699, whole genome shotgun sequence.
ACCESSION   DATGJT010000554 DATGJT010000000
VERSION     DATGJT010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_590699"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1264
                     /locus_tag="VKX24_09570"
     CDS             <1..1264
                     /locus_tag="VKX24_09570"
                     /EC_number="1.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020510992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminobutyraldehyde dehydrogenase"
                     /protein_id="HLJ08776.1"
                     /translation="SWRRTTPSERSLALIRIADAIEARAEELVRVECENTGKPFGLTM
                     SEEIPPMVDRVRFFAGAARLLEGRAATEYMADHTSYVRREPVGVCGAVTPWNYPMMMA
                     VWKWAPALAAGNTMVLKPSDTTPMSTLLLAEILAEHLPPGVFNVVCGDRDTGRALVAH
                     PIPAMVSITGSVQAGMEVAATAASDLKRVHLELGGKAPVIVFDDAQVAGAAEGIAGAA
                     YFNAGQDCTAATRVLAGPRAYGDLVDALVDQARQTTVGPYPEEGADYGPLNNERQLAR
                     VRGFLDRAPAHASVAVGGVQVGERGYCFAPTVVAGLRQEDEMIQQEVFGPVITVQRFD
                     DEAQALEWANGVQYGLASSVWTKDHGRAMRMARDLDFGCVWINTHIPLVAEMPHGGFK
                     HSGYGKDLSVYGFEDYTRIKHVMSNIEA"
     gene            1304..>2456
                     /locus_tag="VKX24_09575"
     CDS             1304..>2456
                     /locus_tag="VKX24_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020552496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HLJ08777.1"
                     /translation="MSAISGLITTEAELAERADKGLKVGALGLISSTVVGVASTAPAY
                     SLAATLGFVVVAIGVRAPIVTLLAFVPMLLISFAYNELNKADPDCGTTFTWATRAFRP
                     KVGWMGGWSIVAADVLVMASLAQIAGQYIFLLFNAKGIGSDAASGWVLLVGIFWIVAM
                     TVICYVGIEISANFQKALLGIELVMLVVLSVVALVKVGNGTAPIGHLVPRWSWFNPFG
                     GNFTDFVAGLTLMLFIYWGWDTAVSVNEETKDKAKTPGRAAIISTVILLLIYELVVLS
                     AQSYAGLGSKGIGLGNTAHQGDVLSVLGTSVFGNSGFGNFLTHLLLLMVLSSAAASTQ
                     TTILPTARTTLSMAVYKAIPSAFGRIHRRFLTPTVSTVAMGTVSIIFYVV"
BASE COUNT          374 a          844 c          845 g          393 t
ORIGIN      
        1 gtcgtggcgg cggacgacgc catcggagcg ctcgctcgcc ctcatccgga tcgccgacgc
       61 gatcgaggcg cgcgccgagg agctcgtccg ggtggagtgc gagaacacgg gcaagccgtt
      121 cggactgacc atgtccgagg agatccctcc gatggtcgac cgggtccggt tcttcgccgg
      181 cgccgcccgg ctgctcgagg gccgggcggc gaccgagtac atggcggacc acacctctta
      241 cgtgcggcgc gaacccgtcg gcgtgtgcgg agccgtcacc ccctggaact acccgatgat
      301 gatggcggtg tggaagtggg cgccggctct ggctgcgggc aacaccatgg tgctcaagcc
      361 ctccgacacc acccccatga gcacactgtt gttggccgag atcctcgctg agcacctgcc
      421 ccccggagtg ttcaacgtcg tctgcggtga ccgcgacacc gggcgggccc tcgtcgccca
      481 cccgatcccg gccatggtct cgatcaccgg gagcgtgcag gcaggcatgg aggtggccgc
      541 gaccgcggcg tccgacctga agcgggtcca cctcgagctc ggcggcaagg cgccggtcat
      601 cgtcttcgac gacgcccagg tggcgggggc cgccgagggc atcgccgggg ccgcgtactt
      661 caacgccggc caggactgca cggcggccac ccgggtgctc gccggcccca gggcgtacgg
      721 ggacctggtc gacgcgctgg tcgaccaggc caggcagacc acggtcggcc cgtatcccga
      781 ggagggcgcc gactacggcc cgctcaacaa cgagcggcag ctggcccggg tccgcggctt
      841 cctcgaccgg gcgccggcgc acgcctctgt cgccgtcggc ggggtgcagg tgggggagcg
      901 gggctactgc ttcgccccga cggtcgtggc cgggctccgc caggaggacg agatgatcca
      961 gcaggaggtc ttcggcccgg tcatcacggt ccaacgcttc gacgacgagg cccaggcact
     1021 cgagtgggcc aacggcgtcc aatacggcct ggcttcaagc gtgtggacca aggaccacgg
     1081 ccgggcgatg cggatggcga gggacctcga cttcggctgt gtctggatca acacccacat
     1141 cccgctcgtc gccgagatgc cgcacggtgg cttcaagcac tcggggtacg gcaaggacct
     1201 gtcggtctac gggttcgagg actacacccg catcaagcac gtgatgagca acatcgaggc
     1261 ctgaggggac ggggccgacc ggcgccgcga caaaggggga cgagtgagcg cgatcagcgg
     1321 attgatcacc acggaagcgg agctggccga acgggccgac aagggcctca aggtcggggc
     1381 gctcgggctg atctcgagca ccgtggtcgg cgtcgcgtcg accgcgccgg cctacagcct
     1441 ggccgcgacc ctcggtttcg tcgtcgtggc gatcggagtg cgggcaccca tcgtgaccct
     1501 cctcgcgttc gtgcccatgc tcctcatctc gttcgcgtac aacgagctga acaaggccga
     1561 cccggactgc ggcaccacct tcacctgggc cacccgggcc ttcaggccga aggtcggctg
     1621 gatgggggga tggtcgatcg tcgccgccga tgtcctcgtc atggcgagcc tggcccagat
     1681 cgccggccag tacatcttcc tgctcttcaa cgcgaagggg atcgggagcg acgctgccag
     1741 cgggtgggtg ctcctggtcg ggatcttctg gatcgtggcc atgacggtca tctgctacgt
     1801 cggtatcgag atctcggcca acttccagaa ggcgctgctc ggcatcgagc tcgtcatgct
     1861 ggtcgtgctc tcggtcgtgg ccctggtcaa ggtcggtaac ggcaccgccc ccatcggcca
     1921 cctcgtcccc cgctggtcct ggttcaaccc gttcggcggc aacttcacgg acttcgtcgc
     1981 cgggctcacg ctcatgctgt tcatctactg gggctgggac acggcggtgt cggtcaacga
     2041 ggagaccaag gacaaggcga agacccccgg tcgggccgcg atcatctcga cggtcatcct
     2101 gctcctcatc tacgagctgg tcgtgctgtc ggcccagtcc tacgccggcc tgggctcgaa
     2161 ggggatcggg ctcgggaaca ccgcgcacca gggcgacgtg ctctcggtgc tcgggacctc
     2221 cgtgttcggc aactcggggt tcgggaactt cctgacccac ctgctgctgc tcatggtgct
     2281 gagctcggcg gcggcctcga cccagaccac gatcctcccg acggcgagga cgaccctgtc
     2341 gatggcggtc tacaaggcga tcccgtccgc gttcggaagg atccaccgcc gtttcctcac
     2401 cccgaccgtg tcgacggtcg ccatgggcac cgtgtccatc atcttctacg tggtca
//
LOCUS       DATGJT010000555         2264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_800459, whole genome shotgun sequence.
ACCESSION   DATGJT010000555 DATGJT010000000
VERSION     DATGJT010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_800459"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1360
                     /locus_tag="VKX24_09580"
     CDS             <1..1360
                     /locus_tag="VKX24_09580"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ08778.1"
                     /translation="AGLMRPFRILDEAVHGRASIGLALAEHGETTEELLSGADTAMYV
                     AKARGKSRYEFFQPHMRAVAVERSGLRADLEWALQREELVIHYQPVVAVPSGVVRGFE
                     ALVRWNHPKRGLLGPGEFIDLAEESGLIVSIGSWVLREACEQANRWRDSTGRGFTMAV
                     NVSARQLQDPGLVGEIRSALHQSRLPAGALVLEITESATVEDTEGVIARLEELKALGV
                     GLAIDDFGTGYSSLSYLRRFPVDQLKIDRSFVSGVATSAEDRAIAVSVIGLGHALGIS
                     VVAEGVETVDQLEWLSQLDCDLAQGFNWTPPLIGEELERWPGFLAGGGEVNGRPGGDS
                     VRVLVADDRDSTRATLRTALEVEDGFAVIADAPDADGAVRLAAEHQPDLILLDVAMPG
                     TSGVEALPALRQAAPAATIVLLTALDPATVYARGGGSADGVLDKTRALGDLVTHLRSL
                     AP"
     gene            complement(1420..1818)
                     /locus_tag="VKX24_09585"
     CDS             complement(1420..1818)
                     /locus_tag="VKX24_09585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08779.1"
                     /translation="MKRSAAVVVGLGLGLVVAIPASAGSTIQAKEVRVFQQSGVEFTA
                     DVAYRCDPSSDAKWIDLVIHDGQTGANGHGEANYPTCDGAEHVLRIPGDTTDGGLFNR
                     GDQATVRVWMRDSHVNPVPGADSTETITLH"
     gene            1990..>2264
                     /locus_tag="VKX24_09590"
     CDS             1990..>2264
                     /locus_tag="VKX24_09590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08780.1"
                     /translation="MKRLVFVSVVSGFVMVLGVPGAAFAHGGGGGSSGGGGGHGGASS
                     VSGGHGESSDVGGRSGASGRSGFGPGDRGGRADGAGRSSPPGDAVDG"
BASE COUNT          310 a          785 c          840 g          329 t
ORIGIN      
        1 cgccgggcta atgcgcccct tccggatcct cgacgaggcc gtccacggcc gggcgagcat
       61 cggcctggcg ctggccgagc acggcgagac gaccgaggag ctcctgagcg gcgccgacac
      121 ggcgatgtac gtggccaagg cccgcgggaa gtcccgctac gaattcttcc agccccacat
      181 gcgggccgtg gccgtcgaac ggtccggatt gcgcgccgac ctggagtggg cgctccaacg
      241 ggaggaactg gtcatccact accagcccgt cgtcgccgtc cccagcggcg tggtgcgggg
      301 cttcgaggcg ctggtgcgct ggaaccaccc caagcgggga ctgctcggcc ccggcgagtt
      361 catcgacctg gccgaggaga gcggcctcat cgtctccatc ggcagctggg tgctccgcga
      421 ggcctgcgag caggccaacc gatggcgcga cagcactggc cgggggttca ccatggccgt
      481 caacgtctcg gcccgccagc tgcaggaccc cggcctggtc ggcgagatcc gctccgccct
      541 gcaccagtcc cgcctgccgg ccggcgcgct ggtgctcgag atcaccgaga gcgccacggt
      601 ggaggacacc gaaggcgtca tcgcccgcct cgaggagctc aaggccctgg gcgtcgggtt
      661 ggccatcgac gacttcggga cgggctattc gtcgctgtcg tacctgcggc ggttcccggt
      721 cgaccagctc aagatcgacc ggtcgttcgt gtcgggcgtg gcgacgagcg ccgaggaccg
      781 ggcgatcgcc gtcagtgtca tcgggctcgg gcatgccctc ggaatctccg tcgtggccga
      841 aggggtcgag accgtggacc agctggagtg gctgtcgcag ctggactgcg atctggccca
      901 gggtttcaac tggacgccgc cgctgatcgg ggaggagctg gagcgctggc cggggttcct
      961 ggccgggggt ggcgaggtga acggccggcc ggggggcgac agtgtccggg tgctcgtcgc
     1021 cgacgaccgg gacagcaccc gcgcgacgct gcggacggcg ctcgaggtcg aggacggctt
     1081 tgccgtcatc gccgacgccc ccgacgccga cggtgccgtc cgcctggccg ccgaacacca
     1141 acccgacctg atcctcctcg acgtggccat gcccggcacc agtggtgtgg aagccctccc
     1201 cgccctccgc caggcggcgc cggccgccac catcgtgctc ctcaccgccc tcgatccggc
     1261 gacggtctac gcccggggcg ggggctccgc cgacggcgtc ctcgacaaga cccgggcgct
     1321 gggcgacctg gtcacccacc tgcgctcgct ggctccttga ggaccgcgac ggccaacccc
     1381 gctggtcaag atcgccgagg ttcgccgtga tttcggcgac tagtggagcg tgatggtctc
     1441 ggtgctgtcg gccccgggca ccgggttcac gtgggagtcg cgcatccaga cgcggacggt
     1501 ggcctgatcg ccgcggttga acaacccgcc gtcggtggtg tcgcccggga tcctgaggac
     1561 gtgctcggcg ccgtcacagg tcgggtagtt cgcctcaccg tggccgttgg cgccggtctg
     1621 gccgtcgtgg atcacgaggt cgatccactt cgcatcggag gacgggtcac accggtaggc
     1681 cacgtccgcc gtgaactcga cccccgactg ctggaacacg cgcacctcct tggcctggat
     1741 cgtgctcccg gcagaggcgg ggatggcgac gaccaggccg aggccgagtc cgaccacgac
     1801 agcggcgctt cgcttcatgg ggcacctccc actgatcggt cctggcaaac atacgttcgg
     1861 cgggggcgga acacagggta agaaaaaggt tacaaaccgc catcgaccgg aaagtgtcct
     1921 ccggacggcg catgcctgtc cacagctggg cctgggacag gcgcgcgccc ggtggacgaa
     1981 ggagatgcgg tgaagcgcct cgtgttcgtt tcggtggtga gcgggttcgt gatggtgctc
     2041 ggtgtgcccg gcgcggcctt cgcccacggc ggtggaggcg gatcctccgg cggcgggggc
     2101 gggcacggcg gcgcgtcctc ggtcagcgga ggccacggcg aatcgtcgga cgtcgggggt
     2161 cggtcggggg cgtcgggccg gtccggcttc gggcccggcg atcgcggcgg ccgggccgac
     2221 ggcgccgggc gctcctcccc gccgggcgac gccgtcgacg ggaa
//
LOCUS       DATGJT010000556         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_177128, whole genome shotgun sequence.
ACCESSION   DATGJT010000556 DATGJT010000000
VERSION     DATGJT010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177128"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VKX24_09595"
     CDS             <1..455
                     /locus_tag="VKX24_09595"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HLJ08781.1"
                     /translation="GQTATLQGYRFTYLGTAQHQTGQKNTIQARVRVGHGGRNLGVYA
                     PALSIFPNSPQAIGTPSVRTGLVRDVYLTLVSSPDQDGRVTIGAQLSPLVVWLWIGGG
                     IIVFGTGIAVWRPLRRSRRRLSAEPGPMEPAPAPVPSADEETMVEAPA"
     gene            452..925
                     /locus_tag="VKX24_09600"
     CDS             452..925
                     /locus_tag="VKX24_09600"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HLJ08782.1"
                     /translation="MIRRVLPVAALLAVVVVALVIGGAGRSHPARSPATRAHDIAAVL
                     RCPVCQGLSVADSPSPTAKAIYDDVRHRVDAGETDAAIKAYYVDHYGQWILLQPETSG
                     VGALVWILPVTALLLGAGGLALAFRRWRRQPALAATDDDRALVEAALAGRKEAPG"
     gene            922..1767
                     /locus_tag="VKX24_09605"
     CDS             922..1767
                     /locus_tag="VKX24_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08783.1"
                     /translation="MSSATRFDPDALASLESERDFLLRSIADLETERAAGNLDDERYQ
                     ALKDDYTARAAAVLRSIEEGHDARPPAPPVPKKRKLLTGGAVLAFVVVAALVLAAAAG
                     RRHPGQTITGNAQSGSATSGAGGALPVDDAARRAALERQVKEHPDDASAHLVFARYLL
                     EKGEATEAVREYVATARLDPKNAEANAYAGWVSFVAAQSANADPKTAAELTDRALDRL
                     NLAVAANDAYPDAHFFRGMVLFRGKNDAKAAIPDFERYLALVPTGQMNDQVRSVLDQA
                     RKAAG"
     gene            1819..>2039
                     /locus_tag="VKX24_09610"
     CDS             1819..>2039
                     /locus_tag="VKX24_09610"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012256157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLJ08784.1"
                     /translation="MASPPPMSINVDAMYKVTITTDRGDIVMELDPALAPQTVNNFVS
                     LARDGFYDDLTFHRVVPEFVIQGGCPEGSG"
BASE COUNT          278 a          776 c          723 g          262 t
ORIGIN      
        1 agggccagac ggcgacgctg cagggttacc ggttcaccta cctcgggacg gcgcagcacc
       61 agaccggcca gaagaacacg atccaggccc gcgtgcgggt cgggcacggg ggccggaacc
      121 tcggcgtcta cgccccggcg ctgtcgatct tccccaactc gccgcaggcc atcgggacgc
      181 cgtcggtgcg caccgggctg gtccgcgacg tctacctgac cctcgtgtcg tcgcccgacc
      241 aggacggccg ggtcacgatc ggcgcccagc tgagcccgct ggtggtgtgg ctgtggatcg
      301 gcggcggcat catcgtcttc gggacgggca tcgccgtctg gcggccgctg cgccgctccc
      361 ggcgccgtct gtcggccgag cccgggccga tggagcccgc cccggccccg gtcccctccg
      421 ctgacgagga aacgatggtg gaggctccgg catgatccgc cgggtgcttc cggtggcggc
      481 gttgctggcc gtggtcgtgg tggcgctcgt catcggcggc gcggggcgga gccacccggc
      541 ccggtcgccg gcgacccggg cccacgacat cgccgccgtc ctgcgctgcc cggtctgcca
      601 gggcctgtcg gtggccgaca gcccgtcgcc gacggccaag gcgatctacg acgacgtccg
      661 ccaccgggtc gacgccgggg agaccgacgc cgccatcaag gcctattacg tcgaccacta
      721 cggccagtgg atcctgctgc agccggagac gtcgggggtc ggggcgctgg tgtggatcct
      781 gccggtgacg gcgctcctgc tcggcgccgg cggcctcgcc ctggcctttc gccgctggcg
      841 ccgccagccg gcgctggccg ccaccgacga cgaccgggcc ctcgtggagg cggcgctcgc
      901 cgggcggaag gaggcacccg gttgagctcg gcgacgcggt tcgatcctga tgccctggcc
      961 tcgctggagt cggagcggga cttcctcctc cgctccatcg ccgacctcga gaccgagcgg
     1021 gcggcgggca acctcgacga cgagcgctac caggcgctga aggacgacta caccgcccgg
     1081 gcggcggcgg tgctgcgctc gatcgaggaa gggcacgacg cccgtccgcc ggcgccgccg
     1141 gtgccgaaga agcggaagct gctgaccggc ggcgccgtcc tggccttcgt cgtcgtggcc
     1201 gccctggtcc tcgccgccgc ggccggccgg cgccaccccg gccagacgat caccggcaac
     1261 gcgcaatccg gctcggcgac gtcgggcgcc ggcggcgccc tcccggtcga cgacgccgcc
     1321 cgccgcgccg cgttggagcg ccaggtgaag gagcaccccg acgacgcctc ggcccacctc
     1381 gtcttcgccc gctacctgct ggagaagggg gaggcgacgg aggcggtcag ggagtacgtc
     1441 gccaccgccc ggctcgaccc gaagaacgcc gaggccaacg cctacgccgg ctgggtctcg
     1501 ttcgtggccg cccagtcggc caacgccgat cccaagacgg cggcggagct gaccgaccgg
     1561 gccctcgacc ggctcaacct cgccgtggcg gccaacgacg cctatcccga cgcccacttc
     1621 ttccggggca tggtgctgtt ccggggcaag aacgacgcca aggcggccat tcccgacttc
     1681 gagcgctacc tggcgctcgt tcccaccggc cagatgaacg accaggtgag gagcgtgctc
     1741 gaccaggccc gcaaggccgc cgggtaaaac cgcctaggct ctcccgcttc cgcgtcccca
     1801 acccgaaggg agcccgccat ggcgagcccg ccccccatga gcatcaacgt cgacgccatg
     1861 tacaaggtca cgatcaccac cgaccggggc gacatcgtga tggagctcga cccggcgctg
     1921 gcgccgcaga ccgtcaacaa cttcgtgtcg ctggcccggg acggcttcta cgacgacctg
     1981 acgttccacc gggtcgtgcc ggagttcgtc atccagggcg gctgccccga gggcagcgg
//
LOCUS       DATGJT010000557         2832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_177506, whole genome shotgun sequence.
ACCESSION   DATGJT010000557 DATGJT010000000
VERSION     DATGJT010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177506"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            272..1798
                     /locus_tag="VKX24_09615"
     CDS             272..1798
                     /locus_tag="VKX24_09615"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HLJ08785.1"
                     /translation="MLLAWWFLALLIAGAAGFPILAAVLGVRRHHRKKAGRPVIHGWR
                     LAGRRLSLVFASLVFGLAATAAGVNDHYSYIPSWHALFGDVSPDLVSHPVAASTAVAR
                     AHGSEGAAAGQDAMPVVKRSDHGTVEKVEVGGPASGVSPRDTYVYLPPDYFDPAHADE
                     RFPVLYLLHGSPGISVDWLRAGWVDRALDDLLAKHRIAPYIVVLPDVNGGYRRDTECE
                     DIAGGPLTQTYLVRDVVGYVDANYRTIADRRARAIGGLSTGGYCAVNLTLRHQDVFSA
                     MISHSGYDRPDQNLYTGDLFGGNREEERANTPGQYLPTIPITQPLAAYFDVGMGDNGS
                     RTESAAMVKVLQQRGVTVAYHDFADESHNWAAWRRNLFSSLPWLSSWFASTGVSTAPD
                     TGGTAVVAAPAPPAPGGAPSGSVAAAPPGTPRGAESAPAADDAAAPPDALHIIPQEPS
                     APAVTVERHLPPSFAGHQAGHTGPSASRHRPRRSTAVAGPPTPAQARLTPAPVRRGAS
                     "
     gene            complement(1743..2366)
                     /locus_tag="VKX24_09620"
     CDS             complement(1743..2366)
                     /locus_tag="VKX24_09620"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLJ08786.1"
                     /translation="MVDVSASSAPNRRLGPDARRAQLVGVGLALMKDVPFDEVTAETV
                     ARAGGVSKALVFHYFPATRDLQVAILRAAAAELLVELDVGAGLPPDERLRAGLDAFVR
                     YIEQQPASYQAVVRRAGSDERLLAVFEDTRASVVGIVAAALGLTELPAGLRMAIRGWI
                     AMVEECVLHWIDGRPVPREELVEFLRRAALTMLPDALALGSAGPAPA"
     gene            2417..>2832
                     /locus_tag="VKX24_09625"
     CDS             2417..>2832
                     /locus_tag="VKX24_09625"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08787.1"
                     /translation="MVNKLVVVTGAGGGIGRATATAFAAGGATVVCADIDAEAAGETA
                     ALCAERGGAGRAERCDVSEAAAVADLAERTGPVDVLVNNAGVGMTGRFADMTVDDWRW
                     IRSVNLDGVVHGVHVFLPMLLEQNEGHVVNTASLAGL"
BASE COUNT          374 a         1118 c          989 g          351 t
ORIGIN      
        1 gaccagccgc tcgaggagcg gttccagcgc cggctcgccc gccccggcca gcgccagcac
       61 gacatcggtg acggcccgga gcgcgtccga cgccggcagg tcggcgccgg tcaccgccgg
      121 cggcccggcg gccgcttccc aagctgaacg cccgctgtgc gggcgttccc gcgtccggcc
      181 gttcgcgtcg ccgacaaaac ggacatactg gtggcccacg gtagggcatg gcgtacgggg
      241 ggagtgaacg ggtgagcgag gcaggtccac catgttgctg gcgtggtggt tcctcgccct
      301 gctgatcgcc ggcgccgccg gcttcccgat cctggccgcc gtcctcggcg tacggcgcca
      361 tcaccggaag aaggcgggcc gcccggtcat ccacggctgg cggctggcgg gacggcgcct
      421 gtcgctggtg ttcgcctccc tcgtcttcgg cctcgccgcc accgccgccg gcgtcaacga
      481 ccactactcc tacatcccga gctggcacgc cctcttcggc gacgtctcgc ccgacctcgt
      541 gagccacccg gtggcggcga gcaccgccgt ggcccgggcc cacggctccg agggcgcggc
      601 cgcgggccag gacgccatgc cggtggtcaa gcggtccgac cacggcacgg tcgagaaggt
      661 cgaggtcggc ggcccggcgt ccggcgtcag cccccgcgac acctacgtct acctgccgcc
      721 cgactacttc gacccggccc acgccgacga gcgcttcccg gtgctgtacc tgctccacgg
      781 ctcgcccggg atctccgtcg actggctccg ggccggctgg gtggaccggg ccctcgacga
      841 cctgctcgcc aagcaccgca tcgcgccgta catcgtcgtg ctgcccgacg tcaacggcgg
      901 ctaccggcgc gacaccgagt gcgaggacat cgccggggga cccctgacgc agacctacct
      961 ggtgcgcgac gtcgtcggct acgtcgacgc caactaccgc acgatcgccg accgccgggc
     1021 ccgggccatc ggcggcctgt cgaccggcgg ctactgcgcc gtcaatctga cgctgcgcca
     1081 ccaggacgtc ttctccgcca tgatctccca ctccggctac gaccggcccg accagaacct
     1141 ctacacgggc gacctcttcg gcgggaaccg cgaggaggag cgggccaaca ccccgggcca
     1201 gtacctgccg acgatcccga tcacccagcc gctcgccgcc tacttcgacg tgggcatggg
     1261 cgacaacggc tcccgcaccg agtcggcggc gatggtcaag gtgctccagc agcggggcgt
     1321 gacggtcgcc taccacgact tcgccgacga gtcgcacaac tgggccgcct ggcgccgcaa
     1381 cctgttctcc tccttgccgt ggctgtcgtc gtggttcgcc tcgaccgggg tgtccaccgc
     1441 acccgacacc gggggaaccg ccgtggtcgc cgcgccggcg ccgccggccc ccggcggggc
     1501 accctccggg tccgtggccg ccgccccgcc cgggacgccg cggggcgccg agagcgctcc
     1561 ggccgccgac gacgccgccg cccctcccga cgccctccac atcatcccgc aggagccgtc
     1621 cgccccggcg gtgacggtgg agcgccatct gccgccctcc ttcgccggcc accaggccgg
     1681 ccacaccggg ccgtcggcct cccgccaccg gccccggcgc tcgaccgcgg tggccgggcc
     1741 gcctacgccg gcgcaggccc ggctgacccc agcgccagtg cgtcggggag catcgtaagg
     1801 gccgcccggc ggaggaactc caccagctcc tcccggggga cgggccgccc gtcgatccag
     1861 tggagcacgc actcctcgac catggcgatc cacccccgga tggccatgcg cagccccgcc
     1921 gggagctcgg tgagccccag ggcggcggcc acgatgccca cgacggaggc ccgggtgtcc
     1981 tcgaagacgg ccagcaggcg ctcgtccgac ccggcccggc gcaccaccgc ctggtagctg
     2041 gccggctgct gttcgatgta gcggacgaag gcgtcgaggc cggcccggag ccgctcgtcg
     2101 ggaggcaggc cggcgccgac gtcgagctct acgaggagct cggcggcggc ggcccggagg
     2161 atggccacct ggaggtcgcg ggtggcgggg aagtagtgga agacgagcgc cttcgacacg
     2221 ccgccggccc gggccacggt ctccgccgtg acctcgtcga agggcacgtc cttcatcagc
     2281 gccaggccga ccccgacgag ctgggcccgg cgggcgtcgg gcccgagacg ccggttcggg
     2341 gcggaagagg cggacacgtc gaccatggca ccagcctaat tgaccatcgg tcaatagtcg
     2401 agtatcgtgt tgacccatgg tcaacaagct ggtggtcgtg accggcgccg gcggcgggat
     2461 cggccgggcc accgccaccg ccttcgccgc cggcggcgcc accgtggtct gcgccgacat
     2521 cgacgccgag gcggccgggg agaccgccgc cctctgcgcc gagcggggcg gcgccggccg
     2581 ggccgaacgc tgcgacgtgt ccgaggccgc cgccgtggcc gacctggccg agcggaccgg
     2641 gccggtcgat gtcctcgtca acaacgccgg cgtcggcatg accggccgct tcgccgacat
     2701 gaccgtcgac gactggcgct ggatccgatc ggtcaacctc gacggcgtcg tccacggcgt
     2761 ccacgtcttc ctgcccatgc tcctcgagca gaacgaggga cacgtcgtca acacggcgtc
     2821 ccttgcgggg ct
//
LOCUS       DATGJT010000558         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1005654, whole genome shotgun sequence.
ACCESSION   DATGJT010000558 DATGJT010000000
VERSION     DATGJT010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1005654"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VKX24_09630"
     CDS             complement(<1..515)
                     /locus_tag="VKX24_09630"
                     /inference="COORDINATES: protein motif:HMM:NF025114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HLJ08788.1"
                     /translation="MMKATAVVIGAGHAGLAMSRRLTERSIDHVVLERGEVANSWRTE
                     RWPSLRLLTPNWQTRLPGHEYAGDDRDGYMPVAEVVTTLTRYARLVGAPVRTATTVHS
                     VSATAQGFDIQANDDLLRARAVVLATGASSLPAIPAVADAVPPAVRTISPLTYRDPGQ
                     LPDGGVLIVGAS"
     gene            complement(536..1096)
                     /locus_tag="VKX24_09635"
     CDS             complement(536..1096)
                     /locus_tag="VKX24_09635"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006244559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HLJ08789.1"
                     /translation="MTITDRPIDNGVNVQALLDARGALSAAPEAAQFTWRASCIWRKG
                     THSQSTVDGFSGLGGEQQHRNTYEFDVDHPECFASEDNGATPVEFVLVSLVGCLTAGV
                     AAVAQFRGIQLRSVTATIEGQMNILGILGADPGVRNGFEAITVRFAIDSDASREDTEA
                     LVAQAQKRSAVFDIMTNPTTVLVELA"
     gene            complement(1108..>2318)
                     /locus_tag="VKX24_09640"
     CDS             complement(1108..>2318)
                     /locus_tag="VKX24_09640"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HLJ08790.1"
                     /translation="RSRCPVQKVRLADGHPAWVVLGYDAARQALGDPRISKDMLAALE
                     DDGDVVAEGLPGPEFSRHMLNLDPPDHTRLRRLVSRAFTPPRVAALEPAVRDIAGGLV
                     DELDAAGPGVTVDLVAGYAHPLPFRVIAELLGIPEADRPDLHARFQVLLTGWAGDPPA
                     EVVEASDKIVTYLRELVAFKRRRPADDLVSVLVAASDEAGDALTIQELLSSLFQLIVA
                     GHDTTASLIGNGVVALLDHPDQLRALRPDPGQLSAAVDELIRFTAPVPHATFRVTAEP
                     VTLGGARIPAREQVLVCLGSANRDPGRFREPDVLDLGRGDGPNLGFGHGIHYCLGAPL
                     ARLEARVAFEALLDRHPGLRLAVDRDALAWAHGDGLVLRGLVSLPVVLEPSPRRPGMT
                     SHPIPSQSSQ"
BASE COUNT          347 a          745 c          902 g          324 t
ORIGIN      
        1 gaagcgccga cgatgagtac cccgccgtcg gggagctggc cgggatcacg gtaggtaagc
       61 ggagagatcg tcctgaccgc cggggggacg gcgtccgcga ccgccgggat cgcgggcagg
      121 ctggatgccc cggtcgccag cacgaccgct cgcgcccgca gaagatcatc attcgcctgg
      181 atgtcgaagc cctgcgccgt ggcgctcacg gagtgcaccg tggtggcggt gcgcaccggc
      241 gcgccgacga gacgggcata gcgggtcagg gtggtcacga cctcggcgac gggcatgtag
      301 ccgtcgcggt cgtcaccggc gtactcgtgc ccggggagcc gggtctgcca gttgggggtg
      361 agcagccgca ggctcggcca gcgctcggtg cgccaggagt tcgccacctc accgcgctcg
      421 aggacgacgt ggtcgatcga gcgttcggtg aggcggcggc tcatggccag gccggcgtgg
      481 ccggcgccga tgacgacggc cgtggctttc atcatggggc gaccagagcc ttgggtcagg
      541 ccagctcgac gagcaccgtg gtcgggttgg tcatgatgtc gaagaccgcc gagcgttttt
      601 gcgcctgggc cacgagcgcc tcggtgtcct cgcgggaggc gtcggaatcg atggcgaacc
      661 ggacggtgat cgcctcgaag ccgttgcgca cgccggggtc ggcgccgagg atacccagga
      721 tgttcatctg gccttcgatc gtggcggtga ccgaccggag ctggatgcca cggaactggg
      781 cgaccgccgc cacgccggcg gtcaggcacc caacgaggct gaccagcacg aactccaccg
      841 gagtcgcgcc attgtcctcg gaggcgaaac attcggggtg gtcgacgtcg aactcgtacg
      901 tgttgcggtg ctgctgctcg ccgcccaggc cgctgaagcc gtccacggtg gactggctgt
      961 gggttccctt gcgccagatg cagctggctc gccaggtgaa ctgggccgct tccggagcgg
     1021 cggacagcgc gccgcgggca tcgagcagcg cctggacgtt cacgccgttg tctatgggcc
     1081 gatcggtgat ggtcatcggt gtctccttta ttgtgacgac tgcgaaggga tgggatggct
     1141 ggtcattccc gggcgccgag gcgagggctc gagaacaacg gggagcgaga cgagtccgcg
     1201 caggacgagt ccgtcgccat gggcccaggc gagcgcgtcc cggtcgacgg cgagccgcag
     1261 gcccgggtga cggtcgagca gggcctcgaa cgcgacccgg gcttcgagac gggccagggg
     1321 cgcgccgagg cagtagtgaa tgccgtggcc gaaaccgagg ttcggtccgt cgccgcggcc
     1381 gagatcgagg acgtccggct cgcggaagcg gccgggatcg cggttggccg agccgaggca
     1441 caccaagacc tgttcacggg cagggatccg cgcgccgccg agcgtcaccg gttcggccgt
     1501 cacccggaag gtggcatgcg ggaccggggc ggtgaaccgg atgagctcgt cgaccgcggc
     1561 ggaaagctgg ccgggatcgg gccgcagcgc ccggagctga tcgggatgat cgagcagagc
     1621 caccacgccg ttgccgatga ggctggccgt ggtgtcgtgg ccggcgacga tgagctggaa
     1681 caggctcgac agcagctcct ggatggtgag cgcgtcgccg gcctcgtcgc tggcggcgac
     1741 caggacgctg accaggtcat cggccggcct gcgccgtttg aaggcgacga gctcgcgcag
     1801 gtaggtaacg atcttgtcgg atgcctccac gacctccgcc ggcgggtcac cggcccatcc
     1861 ggtcagtagc acctggaacc gggcgtgcag gtcggggcgg tcggcctcgg ggatgcccag
     1921 cagctcggcg atcacgcgga acggcagggg atgggcgtac cccgcgacaa ggtcgaccgt
     1981 aacgccggga ccggcggcgt ccagctcgtc gacgaggccg ccggcgatgt cgcggacggc
     2041 cggctcgagc gcggcgacgc ggggcggtgt gaaggcccgg gataccagcc gccggagcct
     2101 ggtgtggtcg ggcgggtcga ggttcagcat gtgccgggag aactccggcc cgggcagccc
     2161 ctcggccacg acatcgccgt cgtcttcgag cgcggccagc atgtccttgg agatgcgggg
     2221 gtcgcccagc gcctgccggg cggcgtcata gccgagcacg acccaggccg ggtgaccgtc
     2281 ggccagccgc accttctgca ccgggcaccg tgacctgg
//
LOCUS       DATGJT010000559         2763 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1212149, whole genome shotgun sequence.
ACCESSION   DATGJT010000559 DATGJT010000000
VERSION     DATGJT010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2763
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212149"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /locus_tag="VKX24_09645"
     CDS             <1..1019
                     /locus_tag="VKX24_09645"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ08791.1"
                     /translation="ASEAVKVPFGRLGVFVAVAAFLPAVLSGFQLVTATHTIAMVLIF
                     ASLSLLVGLGRQISLCHAVFAGFAATTLSHFLSAGIPYLLALVLAALVMVPVAAAVAI
                     PSIRLSGLFLALATFGFGKLVQDILFPTSLAFGTSSVAAIPRPALFKGPVAFYYLVLG
                     VVAVGVLIVEIVRAGRLGRILRALADSPTAVRSLGVNPTSSRVLVFCLSAFLAGLGGG
                     LIGSLIQNLNIYSFDFSQSLIWVTILVAAGARTFGGSVTAAVLLIAAPTLFHSETITN
                     WQPVLFGLGAMFLAQTPNGLVGLLRQPDWSGLAARAGWRQDRRRAQERYAYAMLGGAG
                     VPEN"
     gene            1031..1732
                     /locus_tag="VKX24_09650"
     CDS             1031..1732
                     /locus_tag="VKX24_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019876115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08792.1"
                     /translation="MLRLENVQSGYGTVQVLRGVSLRVPAGSAVALLGANGAGKTTLL
                     RTAAGVIQPTNGHIWFDGIAVEREPYHRRAQRGLCLIPEGRGIFRDLTVRENIAMFSG
                     DTMKTSDAVDLAVDAFPALKARLGQPAGQLSGGQQQMLAVTRALLPETKVILADELSV
                     GLAPVIIDEIFDVVSSLKATGRSLLIVEQYVDRVLEVADYVYILHKGQVVFVGEPEQC
                     LKTEIFDQYVGAAHS"
     gene            complement(1943..2260)
                     /locus_tag="VKX24_09655"
     CDS             complement(1943..2260)
                     /locus_tag="VKX24_09655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08793.1"
                     /translation="MTGDLAPPVAGAGPPPGAGRPGVGLAAAEGELVAARPAEATPDE
                     GLGDGWPAACRVEEPDAEPVAAFPAGEAVTPPPGAVPPDPLPAAGVEATAPAPESPAG
                     VCV"
     gene            2262..>2763
                     /locus_tag="VKX24_09660"
     CDS             2262..>2763
                     /locus_tag="VKX24_09660"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ08794.1"
                     /translation="MGNVGTWSGVFGGIGIPELHGVKAWVGDVNARGGLAGHPVRLVS
                     YDDGGEPGRALSSAQRLVEQDKAIVILGVFQPTTEQAVTAYLEQKQIPLMVTCNCAPA
                     DDLSPMIFPIGPGALGNAWQHSWPLVSGVNQDIRDHMGLLYCQEAPICPESAKNIETF
                     QTQANFK"
BASE COUNT          397 a          974 c          919 g          473 t
ORIGIN      
        1 gggccagcga agcggtgaag gtgccgttcg gtcggctcgg agtgttcgtg gcggtggccg
       61 ccttcctccc ggccgtcctc agcgggttcc aactcgtcac tgcgacgcac accatcgcca
      121 tggtgctgat cttcgccagc ctgagtctgc tggtcggcct gggtcggcag atctcgctgt
      181 gccatgccgt cttcgccggc ttcgcggcga cgacgctgtc ccacttcctg tcggccggga
      241 ttccatacct cctggccctc gtcctggccg cgctcgtcat ggtcccggtc gctgccgccg
      301 tggccattcc gtcgatccgg ctctccggat tgttcctggc cctggcgacc tttgggttcg
      361 ggaagctggt gcaggacatc ctgttcccga cgtcgctggc ctttgggacg agctcggtgg
      421 ccgccatccc ccgccctgcg ctcttcaaag ggccggtggc cttttactat ctcgtcctcg
      481 gggtggtggc ggtcggagtc ctgatcgttg agatcgtccg agccggccgt ctcggccgca
      541 tcctgcgggc cctggcggat tcgcccaccg cggtccgctc gctcggcgtc aaccccacgt
      601 ccagccgtgt gctcgtgttc tgcctgtcgg cgttcctggc cgggctcggc ggagggctga
      661 tcggctcgct catccagaac ctcaacatct acagcttcga cttctcccag tcgctcatct
      721 gggtgacgat cctcgtcgcc gccggcgccc ggaccttcgg cggttcggtc accgccgctg
      781 tcctgttgat cgccgcgccg acgctgttcc acagcgagac gatcaccaac tggcaacccg
      841 tccttttcgg gctgggggcc atgttcctgg cgcagacgcc gaacggcctg gtcggcctgc
      901 tacgccagcc cgactggagc ggactcgccg cccgggccgg ctggcgccag gatcgccggc
      961 gagcgcaaga gcgctacgcc tacgcgatgc tcggcggtgc cggcgttccc gagaattgaa
     1021 agggacgacg atgctgcggt tggaaaacgt ccaatccggg tacggaaccg tccaggtcct
     1081 ccggggtgtg agcctccggg tgccggccgg aagcgccgtc gctctgctcg gcgccaacgg
     1141 tgccggcaag acgacgctgt tgcgcaccgc cgccggtgtg atccaaccga cgaacggcca
     1201 catctggttc gacggtatcg ccgtcgagcg ggagccatac catcgccggg cgcagcgggg
     1261 gctgtgtctc atccctgagg ggcgaggcat cttccgcgat ctgaccgtcc gcgagaacat
     1321 cgccatgttc agcggtgaca cgatgaagac cagcgacgcg gtcgacctcg ccgttgacgc
     1381 cttcccagcc ctgaaggcga ggctcggcca accggccggg caactgtccg gaggtcagca
     1441 gcagatgctg gcggtgaccc gtgccttgct ccccgagacc aaggtcatcc tggccgacga
     1501 actgtcggtc ggcctggcgc ccgtcatcat cgatgaaatc ttcgacgtcg tttcgtcgct
     1561 caaggccaca ggccggagcc tcctcatcgt ggagcagtac gtagatcgcg ttctcgaggt
     1621 cgccgactac gtctacatcc tccacaaggg tcaagtggtc ttcgtcggcg agcccgagca
     1681 gtgcctgaag accgagatct tcgaccagta cgtcggagcg gcccactcct gacggagtga
     1741 cgacgctcac gtttcgcaac atcaccgttc ttatcgcaag gaggggaagc accatgagcg
     1801 ccacccggcg attgttctgg gccctgatcc cagtcgtctt gatcgcgacg gcctgcggca
     1861 accgggctgg ccgtccgacg gcggccggac cggctcaggt ggagacgcag ccgggagcgg
     1921 cgtcggccgg gggctctcag agctacacgc agacgccggc cggcgactcc ggcgccgggg
     1981 ccgtcgcttc gacgcctgcg gccggcagcg gatccggcgg tacggcgccc ggcggcggcg
     2041 tcaccgcttc accggcgggg aacgcggcca cgggctcggc gtcgggctct tccacccggc
     2101 aggccgcggg ccagccgtcg cccaatccct cgtccggggt tgcctcggcc ggccgggccg
     2161 ccaccaactc gccttcagcg gcggcgagtc ccacgcctgg cctgcccgcg cccggcggtg
     2221 gcccggcgcc ggccaccggc ggggccaagt cacccgtcac agtgggaaac gtcggcacat
     2281 ggagcggggt cttcggagga atcgggatcc ccgagctgca cggagtcaag gcctgggtcg
     2341 gcgatgtgaa cgcccggggc ggcctggccg gccaccccgt ccggctcgtg tcgtatgacg
     2401 acggagggga accgggccgg gcactgtcgt cggctcaacg gcttgtcgag caggacaagg
     2461 cgatcgtcat cctcggtgta ttccaaccca cgacggagca agcggtgacg gcctacctgg
     2521 agcagaagca gatcccgctc atggtcacct gcaactgcgc cccggcggac gatctcagcc
     2581 ccatgatctt cccgatcggc cccggcgccc ttggcaacgc ctggcagcat tcctggccac
     2641 tggtgtccgg cgtgaaccag gacatccgtg accatatggg cctgctgtac tgccaggagg
     2701 cgccgatctg ccccgagtcg gcgaagaaca tcgagacctt ccagacgcag gcgaacttca
     2761 aga
//
LOCUS       DATGJT010000560         3823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1521672, whole genome shotgun sequence.
ACCESSION   DATGJT010000560 DATGJT010000000
VERSION     DATGJT010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3823
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1521672"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /locus_tag="VKX24_09665"
     CDS             complement(<1..895)
                     /locus_tag="VKX24_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08795.1"
                     /translation="MTALTALALFGPVAPARSAPAGRSRDPQRPSRHSYRSEPADAGM
                     PARFVAELDGQLVVVSADTGRIQRRLTAEQPGGGAASPAITANGRTVWFTRGDGTCAA
                     HIASVPAAGTSAERPLPGSGDDGPELFPLPRPGHAQLALTRYRCSDGTVTLVVGDLRG
                     VESHGQTGLIPRAWSRDGAHLLAINAKSGGLRLLDVNNAGGVVSDQPVNPADPTPGCS
                     LNVVGFSPDDNDGYVAVRHCGAGGNGDAQPTLVLLDRTGAVRQTVLRLARGEDFGAVV
                     AFDQSGHSLLYSTVAAGNSAAG"
     gene            1010..1927
                     /locus_tag="VKX24_09670"
     CDS             1010..1927
                     /locus_tag="VKX24_09670"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HLJ08796.1"
                     /translation="MVPRLPRRTRTYRHHHLDSTRWDAVRHRPGDIVVSTSAKAGTTW
                     MQRILSLLIFGTGPLPDVLSRVSPWIDCRYVDPIDDVIARIEAQTHRRFLKTHLPLDA
                     LPYDEGVRYVMVGRDSRDVFMSLWNHYGGYTDAMYELLAAGDPPGAPLPRRPDDLRWL
                     WSQWLTRASFPWEADGWPFWSHHYHAASWWDFRDPENILLVHYNDLLADLDGEMRRVA
                     AHVGIEVADGSWPALVDAARFESMKGDATRLLGPMDRFAGGTGTFLYKGSNGRWRDVL
                     TEEDLRLYDKVAGSLDPALRAWLEAGRLG"
     gene            1964..2875
                     /locus_tag="VKX24_09675"
     CDS             1964..2875
                     /locus_tag="VKX24_09675"
                     /inference="COORDINATES: protein motif:HMM:NF006128.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HLJ08797.1"
                     /translation="MTDASAVVLYEERDGVAFVTLNRPEKKNTLTEAVIAGIADGIDR
                     AAASRAVSAVVLRGTGGVLCAGYDLTNDQWGAEGGDERPGLRLGGWTMPYDAEGPDPR
                     PGVWDPVRDWQFMGHNTRRFMKIWDCPKPVIAQVEGWALGGATDMILCCDQLFMADDA
                     VIGYPPARIFGLPTTAMWVYRLGLERAKQYLLTGCEIDAPTALRIGLVSEVHPAADLA
                     SRVEEHARRFSRIPANQLALNKLLINQAFENMGLRTTQLFGTLFDGMMRHTEEAYQWV
                     EAFGDKGFREVIRERDRPWGDYGERSR"
     gene            2886..3266
                     /locus_tag="VKX24_09680"
     CDS             2886..3266
                     /locus_tag="VKX24_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012886872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ08798.1"
                     /translation="MLHHLTLWVPDLGRSEPPWRWLLGELGYSVDRSLPRVLVFRHPG
                     GLAVALEQSPDMVPGMLYSRLRPGVNHIAFAVESVAALDDVVAEASDHGWSPFAGDRH
                     AIAGAARVAYLEDADGFEVELVAP"
     gene            complement(3278..>3823)
                     /locus_tag="VKX24_09685"
     CDS             complement(3278..>3823)
                     /locus_tag="VKX24_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013837995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding domain-containing protein"
                     /protein_id="HLJ08799.1"
                     /translation="DASAALTALGRFRVLCAHRRGPYGVATWSAQVEAWLRSALPGFA
                     AAGAWYVGRPLLVTENDYTLGLYNGDTGVVIAAGGGRPAAVFERRGQILEFSPARLSA
                     VETVHAMTIHKSQGSQFDTVAAVLPEPDSPILTRELLYTAVTRARQRLLLAGSEAAIR
                     AAVTRPVARASGLRRWLWELH"
BASE COUNT          496 a         1367 c         1454 g          506 t
ORIGIN      
        1 ggccggcggc gctgttcccg gccgccacgg tggagtacag gagcgagtgg ccgctctggt
       61 cgaaggcgac gacggcgccg aagtcctcac cccgggccag ccggaggacg gtctggcgaa
      121 cggcgccggt cctgtcgagc aggacgaggg tgggctgggc gtcgccgttg ccgccggcgc
      181 cgcagtggcg gacggcgacg tagccgtcgt tgtcgtcagg gctgaagccc acgacgttga
      241 ggctgcaccc cggcgtgggg tcggccgggt tgacgggctg gtcggaaacg acgccgccgg
      301 cgttgttgac gtcgaggagg cgcagcccgc cgctcttggc gttgatggcc aacaggtggg
      361 cgccgtcgcg gctccacgcc cgggggatga gccccgtctg gccgtggctc tcgacgcccc
      421 ggaggtcgcc gacgacgagc gtcacggtcc cgtcgctgca gcggtagcgg gtgagggcca
      481 gctgggcgtg gccggggcgg gggagcggga agagctcggg gccgtcgtcg cccgagccgg
      541 ggagcggacg ctcggcgctc gtaccggccg ccggcaccga ggcgatgtgg gcggcgcagg
      601 tgccgtcgcc ccgggtgaac cagacggtgc ggccgttggc ggtgatggcc gggctggcgg
      661 cccccccgcc cggctgctcg gcggtgaggc ggcgctggat gcggcccgtg tcggccgaca
      721 cgacgacgag ctggccgtcg agctcggcga cgaaccgggc cggcatgccg gcgtcggcgg
      781 gctcggaccg gtacgagtgg cgggacgggc gctgcgggtc gcggctgcgg ccggccgggg
      841 ccgaccgggc cggggccacc gggccgaaga gggcgagggc ggtcagggcg gtcaccgccg
      901 caaccgcgct ccgccgtttc cggtctcccc cgggcctccc caacgccacg gccgttcaac
      961 gtagcgcccc tcaccggact ccggcaggcc ccggcggtac cctcctcagg tggttcccag
     1021 actcccgcgc cgcacccgca cctaccgtca ccaccacctc gacagcacca ggtgggacgc
     1081 cgtccgccac cggcccggcg acatcgtcgt gtcgacgtcg gccaaggccg gcacgacgtg
     1141 gatgcaacgg atcctcagcc tgctgatctt cgggacgggt cccctgcccg acgtcctcag
     1201 ccgggtgtcg ccctggatcg actgccgcta cgtcgacccg atcgacgacg tgatcgcccg
     1261 catcgaggcc cagacccacc ggcggttcct caagacccac ctgccgctcg acgccctgcc
     1321 ctacgacgag ggcgtccggt acgtgatggt gggccgggac agccgcgacg tgttcatgtc
     1381 gctgtggaac cactacggcg gttacaccga cgccatgtac gagctgctgg ccgccggcga
     1441 cccgccgggg gcaccgctgc cccgccggcc ggacgacctg cgctggctgt ggtcgcagtg
     1501 gctgacccgg gcgtcgttcc cctgggaggc ggacggatgg cccttctgga gccaccacta
     1561 ccacgccgcc tcgtggtggg acttccgcga cccggagaac atcctgctcg tccactacaa
     1621 cgacctgctg gccgacctcg acggggagat gcgccgggtc gccgcccacg tggggatcga
     1681 ggtggcggac gggtcctggc cggcgctggt cgacgccgcc cggttcgagt cgatgaaggg
     1741 cgacgccacc cggctcctcg ggccgatgga ccgcttcgcc ggcgggaccg ggacgttcct
     1801 ctacaagggc agcaacggcc gctggcgcga cgtgctgacc gaggaggacc tccggctcta
     1861 cgacaaggtg gccggctcgc tcgacccggc gttgcgggcc tggctggagg ccggccggct
     1921 gggttgagcc cggcgtcggg ctgcggcgcg agactccgcc cccatgaccg atgcttccgc
     1981 ggtggttctg tacgaggagc gggacggcgt ggccttcgtc acgctcaacc gtccggagaa
     2041 gaagaacacc ctgaccgagg cggtgatcgc cgggatcgcc gacggcatcg accgggcggc
     2101 ggccagccgg gccgtgtcgg ccgtggtgct gcggggaacc ggcggggtgc tgtgcgccgg
     2161 ctacgacctg accaacgacc agtggggggc cgagggcggc gacgaacggc ccggactgcg
     2221 cctcgggggc tggacgatgc cctacgacgc cgagggcccc gacccccggc cgggcgtgtg
     2281 ggacccggtg cgggactggc agttcatggg ccacaacacc cggcggttca tgaagatttg
     2341 ggactgcccg aagccggtga tcgcccaggt cgagggctgg gcgctgggcg gcgccaccga
     2401 catgatcctg tgctgcgacc agctcttcat ggccgacgac gccgtcatcg gctacccgcc
     2461 ggcccggatc ttcggcctgc cgaccaccgc catgtgggtc taccggctgg ggctcgagcg
     2521 ggccaagcag tacctcctca ccggctgcga gatcgacgcc ccgacggcgc tgcggatcgg
     2581 cttggtgtcg gaggtccacc cggcggcgga cctggcctcg cgggtggagg agcacgcgcg
     2641 gcggttctcc cggatccccg ccaaccagct ggccctcaac aagctgctga tcaaccaggc
     2701 cttcgagaac atggggctgc ggacgacgca gctgttcggc accctcttcg acggcatgat
     2761 gcgccacacc gaggaggcct accaatgggt ggaggccttt ggcgacaagg ggttccggga
     2821 ggtgatccgg gagcgcgacc gcccctgggg cgactacggg gagcgttctc ggtaacctgc
     2881 ggccggtgct gcatcacctc accctgtggg tgcccgacct cggccgctcg gagccgccgt
     2941 ggcgatggct gctcggggaa ctcggctact ccgtcgaccg gtcgctgccg cgggtgctgg
     3001 tcttccggca tcccggcggg ttggcggtgg cgctggagca gtcgcccgac atggtgccgg
     3061 gcatgctcta cagccggctc cggcccggcg tgaaccacat cgctttcgcc gtggagtcgg
     3121 tggcggccct cgacgacgtc gtggccgagg cgtcggacca cggctggtcg ccgtttgcgg
     3181 gcgaccgcca cgccatcgcc ggcgccgccc gggtcgccta cctggaggac gccgacggct
     3241 tcgaggtgga actcgtcgcc ccgtaggacg ggcggggtca gtggagttcc cagagccagc
     3301 ggcgcagccc cgaggcccgg gcgaccggcc gggtcaccgc cgcccggatg gccgcctcgc
     3361 tcccggccag cagcagccgc tgccgggccc gggtgaccgc ggtgtagagc agctcccggg
     3421 tgaggatggg cgagtcgggc tcgggcagga cggcggccac cgtgtcgaac tgcgagccct
     3481 ggctcttgtg gatcgtcatg gcgtggacgg tctcgacggc cgacagccgg gccgggctga
     3541 actccagtat ctgcccccgc cgctcgaaca ccgccgccgg ccgcccgccg ccggcggcga
     3601 tcacgacgcc ggtatcgccg ttgtagagcc cgagcgtgta gtcgttctcg gtcaccagca
     3661 gcggccgccc gacgtaccag gcgccggcgg cggcgaaccc cggcagcgcc gaccggagcc
     3721 acgcctcgac ctgggcgctc caggtggcca ccccgtacgg cccccgccga tgggcgcaga
     3781 gcacccggaa ccggccgagc gccgtgaggg cggcggaggc gtc
//
LOCUS       DATGJT010000561         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_74783, whole genome shotgun sequence.
ACCESSION   DATGJT010000561 DATGJT010000000
VERSION     DATGJT010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74783"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VKX24_09690"
     CDS             <1..219
                     /locus_tag="VKX24_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08800.1"
                     /translation="VILVEEPGRALDAGDVAAVLDRPVVGRFPVRAEIARAVDAGVLR
                     DRLPAALAAPARAVVAAVTDSAGGRWAA"
     gene            216..1235
                     /locus_tag="VKX24_09695"
     CDS             216..1235
                     /locus_tag="VKX24_09695"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLJ08801.1"
                     /translation="MSGPTGPTGAGAPDPTELERLFGDPDISEILLNGGGRAFVERAG
                     RLEPVAVGLDETGVRRAVERIIAPLGLRLDRASPMVDARLPDGSRLHAVLAPVAVDGT
                     CVAIRRFGPGRRVLADFGLTGSGAGLLRWAVGAGWNLLISGGTGAGKTTLLNTLAGEF
                     ATEERIVTIEETAELALPQPHVVRLEARPANAEGAGAVPVRSLVRAALRLRPDRLVLG
                     EVRGEEAFDLLQALNTGHSGSLSTIHANGPGDALTRLENLVLLAGLGLPLSAIRAQIR
                     AAVDAVVHVVRSPGGGRTVAAVAELSRSGGLHLLYPPAPGGRPPTRPPRHAGVAAFTV
                     GDGAC"
     gene            1229..1795
                     /locus_tag="VKX24_09700"
     CDS             1229..1795
                     /locus_tag="VKX24_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLJ08802.1"
                     /translation="MLTGGRRRVTDLEAALPDLLERLAGDLRAGAAPPAALREAAGAA
                     DLPVALRADLARVLGHLERDGLAPAVAAWARERPLPAVAAVAAALEVAVGAGGPAAPA
                     LEGLAAGLRDRHDALAEVAALSAQARLSAVVVGAAPVVSLGLSLLCDRRVAATLLAAG
                     RGRACLLTGVALEALAAAWMGRILRCDG"
     gene            1783..>2118
                     /locus_tag="VKX24_09705"
     CDS             1783..>2118
                     /locus_tag="VKX24_09705"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLJ08803.1"
                     /translation="MRRLTRPGGDEAVALAADLAAVVLTAGLTPYLAVEVLARSGPGP
                     AAARFEAVLAATGAGERLADALDAGAAGSPALAPLLAILAASERTGAAAGPALGRLAA
                     SSRARIRRRA"
BASE COUNT          176 a          848 c          827 g          267 t
ORIGIN      
        1 gtgatcctcg tcgaggagcc gggccgggcg ctcgacgccg gcgacgtggc cgccgtcctc
       61 gaccggccgg tcgtgggccg gttcccggtg cgggcggaga tcgcccgggc cgtcgacgcc
      121 ggcgtcctcc gggaccggct cccggccgcg ctggcggcgc cggcccgagc ggtggtggcg
      181 gcggtcaccg acagcgccgg cgggcggtgg gcggcgtgag cggcccgacc ggcccgaccg
      241 gagcgggcgc ccctgacccg accgagctcg agcgcttgtt cggcgacccc gacatctccg
      301 agatcctgct caacggcggc gggcgggcgt tcgtcgaacg ggccgggcgc ctggagccgg
      361 tggcggtcgg tctcgacgag accggcgtcc gtcgggcggt ggagcggatc atcgccccgc
      421 tcgggctccg actcgaccgg gcctcgccga tggtcgacgc ccgcctgccc gacggctcac
      481 gcctgcacgc cgtgctggcg ccggtggccg tcgacggtac gtgcgtcgcc atccggcggt
      541 tcggccccgg ccggcgggtc ctggccgact tcggcctcac cggctccggg gccggcctgc
      601 tccgctgggc cgtcggggcg gggtggaacc tcctgatatc gggcgggacg ggcgccggca
      661 agaccacact gctcaacacg ctggccggcg agttcgccac cgaggagcgg atcgtcacga
      721 tcgaggagac ggccgagctc gcgttgccgc aaccccacgt cgtccggctc gaagcccgcc
      781 cggccaacgc cgaaggcgcc ggagccgtcc ccgtccggtc tctcgtccgg gcggccctcc
      841 ggctccggcc ggaccggctc gttctcggcg aggtccgggg cgaggaggcc ttcgaccttc
      901 tccaggccct gaacaccggg cactccggct cgctgtcgac gatccatgcc aacggtccgg
      961 gcgacgccct cacccggctg gagaacctcg tgctcctggc cgggctcggc ctgccgcttt
     1021 ccgccatccg ggcccagatc cgggcggcgg tcgacgccgt cgtccacgtc gtccgctcgc
     1081 ccggaggcgg gaggacggtg gcggccgtcg ccgagctctc ccgatccggc ggtctccacc
     1141 ttctctatcc gcccgcgccg ggaggccgtc ctccgactcg gcctccccgc catgccggcg
     1201 tcgcggcctt caccgtcggg gatggggcgt gctgaccggc gggcgccgcc gggtgaccga
     1261 tctggaggcg gcgctacccg acctcctcga gcggctggcc ggcgacctcc gggccggtgc
     1321 ggcaccgccg gcggcgttgc gggaggcggc cggcgccgcc gatctcccgg tggcgctgcg
     1381 ggccgacctc gcccgggtcc tgggccacct cgagcgcgac gggctcgcac cggcggtcgc
     1441 ggcctgggcg cgggagcggc cgctcccggc cgtcgccgcc gtcgccgccg ccctcgaggt
     1501 ggccgtcgga gccggcgggc cggccgcgcc ggcgctggag gggctggccg ccggcctgcg
     1561 cgaccggcac gacgccctcg ccgaggtcgc cgctctgtcg gcccaggccc gcctctcggc
     1621 cgtcgtcgtc ggggccgcgc cggtggtgtc gctcggcctt tccctcctgt gtgaccgccg
     1681 cgtcgcggcg acgctgctcg ccgccggccg gggccgggcc tgcctgctga ccggcgtcgc
     1741 cctggaagcg ctggccgcgg cctggatggg ccgcatcctc cgatgcgacg gctgacccgg
     1801 cccggcggcg acgaggccgt ggcgctggcc gccgacctgg cggcggtggt gctcaccgcg
     1861 gggctcactc cgtatctggc cgtcgaggtc ctggcccgtt cggggcccgg tccggccgcc
     1921 gcccggttcg aggcggtgct agcggccacc ggagccgggg agcgcctggc cgacgcgctc
     1981 gatgccgggg ccgccggcag cccggcgctg gccccgctgc tggccatcct ggcggcgtcg
     2041 gagcgcaccg gcgccgccgc cggcccggcg ctcggccgtc tcgccgcctc gagccgggcg
     2101 cggatccgcc gccgggcc
//
LOCUS       DATGJT010000562         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1212702, whole genome shotgun sequence.
ACCESSION   DATGJT010000562 DATGJT010000000
VERSION     DATGJT010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212702"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VKX24_09710"
     CDS             complement(<1..655)
                     /locus_tag="VKX24_09710"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HLJ08804.1"
                     /translation="MRWVDAHCHLDTIGEDDAAAIPAAIARARAAGVAGLLTIGTDLP
                     SSRAAAEIAGEYAGVWAAVGVHPHDASALDDRAFAELMALACLPKVMAIGEIGLDFYR
                     DLSPREVQREAFRRQLALARSMGKTVVIHMREAIDEVFAILEEVGPPERLVFHCFSGT
                     ADQARHAVGLGGYVSFAGNISYKNAGNLREAAAVVPTDRLLVETDAPFLAPVPHRGRP
                     "
     gene            complement(685..>2238)
                     /gene="metG"
                     /locus_tag="VKX24_09715"
     CDS             complement(685..>2238)
                     /gene="metG"
                     /locus_tag="VKX24_09715"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010475456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HLJ08805.1"
                     /translation="ITTPIYYVNDVPHIGHAYTTVSADFVARYHRLAGERVHFLTGTD
                     EHGEKVGQAAEARGISPQAWADEVVPRWKEVWARLEISYDDFIRTTEPRHTGPVQQLA
                     QQLYDQGDVYLGEYEGPYCVACETFYQPSEIIDGCCPIHERPVEMLKEKNYFFRLSAY
                     QDRLLDLYRSQPDFVQPDSRRNEVVSLVRGGLQDLSMSRTSFSWGVPIPWDPAHVMYV
                     WVDALQNYITAVGYGSDPARFARIWPADYHFIGKDILRHHAVIWPALLMAAGLPLPRH
                     VFAHGFLTVGGKKMSKTNLTGISPHTLIDTFGADGYRYHFLREGTFGADGAFSWEAMV
                     TRYNADLANDLGNLVSRALAMVTNYFAGAVPEPGAATAAEEGLAAAAAAAAAGLTRGV
                     ETLDPGGAMESAMSLVRATNLYINEAAPWKLAKVPEQRERLATVLYAVCEAIRVASVL
                     FAPAMPSASRRIRAQLGVPEVEERPLAPAVVWGDLAAGTPVRRGDPIFPRIDAAAEES
                     ASAGAGESA"
BASE COUNT          326 a          801 c          793 g          318 t
ORIGIN      
        1 ttggcctccc ccggtgcggg actggggcga ggaacggcgc gtcggtttcg accagcagcc
       61 ggtcggtggg cactaccgca gccgcctccc gtaaattccc ggcattcttg taggagatat
      121 tgccagcgaa ggatacgtag ccccccaaac cgacggcgtg ccgggcctgg tctgcggttc
      181 ccgagaagca gtggaagacc agccgctccg gcgggccgac ctcctcgagg atggcgaaca
      241 cctcgtcgat cgcctcccgc atatggatca cgaccgtctt gcccatgctc cgggcgagcg
      301 ccagctggcg ccggaacgcc tcccgctgga cctccctcgg cgacagatcc cggtagaaat
      361 cgagcccgat ctcgccgatc gccatcacct tgggcaggca ggccagcgcc atgagctcgg
      421 cgaaggcccg gtcgtcgagg gccgaggcgt cgtgcgggtg gacgccgacg gcggcccaga
      481 ccccggcgta ctccccggcg atctccgccg ccgcccggct cgagggcagg tcggtgccga
      541 tcgtcagcag gccggcgacg ccggccgccc gagcgcgggc gatcgccgcc gggatggccg
      601 cagcatcgtc ctcgccgatc gtgtccaggt ggcagtgggc gtcgacccac cgcacgcccg
      661 gcgcgacccc ggccccggaa ccggtcaggc ggactctccg gcccccgccg aggcggattc
      721 ctcggccgcg gcatcgatgc gcgggaagat cgggtcgcct cgccggaccg gggtcccggc
      781 ggccaggtcg ccccagacga cggccggcgc cagcggccgc tcctcgacct cgggcacccc
      841 gagctgggcg cggatccgcc ggcttgccga cggcatcgcc ggggcgaaca gcaccgaggc
      901 cacccggatc gcctcgcaca ccgcgtacag caccgtcgcc agccgctccc gctgctccgg
      961 gaccttagcc agcttccacg gggcggcctc attgatgtac aggttggtcg cccgcaccag
     1021 cgacatcgcc gactccatcg ccccgccggg gtccagcgtc tccacgcccc gggtcaggcc
     1081 ggccgccgcc gcggccgccg ccgcggccag gccctcctcg gccgccgtcg ccgcgccggg
     1141 ctccggcacc gccccggcga agtagttggt caccatcgcc agcgcccggc tgaccaggtt
     1201 gccgaggtcg ttggccagat cggcgttgta gcgggtgacc atcgcctccc aggagaaggc
     1261 cccgtcggcg ccgaaggtcc cctcccggag gaagtggtag cggtagccgt cggctccgaa
     1321 ggtgtcgatc agcgtgtgcg gcgagatccc ggtcagattg gtcttggaca tcttcttgcc
     1381 cccgacggtc aggaagccgt gggcgaagac gtggcggggc agcggcagcc cggcggccat
     1441 cagcagcgcc ggccagatca ccgcgtggtg gcgcaggatg tccttgccga tgaagtggta
     1501 gtcggcgggc cagatccggg caaagcgtgc cgggtcggag ccgtaaccga ccgccgtgat
     1561 gtagttctgc agggcgtcga cccagacgta catcacgtgg gccgggtccc acgggatcgg
     1621 gacgccccag gagaacgagg tccggctcat cgacaggtcc tgcagcccgc cacggaccag
     1681 gctgaccacc tcgttgcgcc ggctgtcggg ctggacgaag tcgggttggg accggtacag
     1741 gtcgagcaac cggtcctggt aggcggacag ccggaagaag tagttcttct ccttcagcat
     1801 ctcgaccggc cgctcgtgga tcgggcagca gccgtcgatg atctcggagg gctggtagaa
     1861 ggtctcgcag gcgacgcagt acgggccctc gtactcgccg aggtacacgt cgccctggtc
     1921 gtacagctgc tgggccagtt gctgcaccgg gccggtgtgc cggggctcgg tggtgcggat
     1981 gaagtcgtcg taggagatct cgagccgggc ccagacctcc ttccaccggg gcaccacctc
     2041 gtccgcccac gcctgcggcg agatcccgcg ggcctcggcg gcctggccga ccttctcgcc
     2101 gtgctcgtcg gtgccggtca ggaaatggac ccgctcgccg gccaggcggt ggtagcgggc
     2161 gacgaagtcg gcggacaccg tggtgtaggc gtgcccgatg tggggaacat cgttcacgta
     2221 ataaatcggc gtcgtgat
//
LOCUS       DATGJT010000563         2089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_801817, whole genome shotgun sequence.
ACCESSION   DATGJT010000563 DATGJT010000000
VERSION     DATGJT010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_801817"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VKX24_09720"
     CDS             complement(<1..453)
                     /locus_tag="VKX24_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010540463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HLJ08806.1"
                     /translation="MAERFESVGAVQQALRRVDYLADPSTAGVVFLADRLEKPVLVEG
                     PAGVGKTELAKAIAATSGARLIRLQCYEGLDESKALYEWNYKKQLLRIQADSDKSWQE
                     LEDDIFAEEFLLTRPLLEAIRSSEPVVLLVDEVDRVELETEALLLEILS"
     gene            complement(545..1813)
                     /locus_tag="VKX24_09725"
     CDS             complement(545..1813)
                     /locus_tag="VKX24_09725"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011641006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HLJ08807.1"
                     /translation="METSSPPSSGVADLGRRAKAASRQLATASTAAKDEALRAAADLL
                     EQRSGDVLEANAADVEAAAAGGMEPGPLDRLRLTDARLAGMAAGLRKVAGLPDPVGEV
                     LDGWKRPNGLEISRVRVPLGVVAIIYENRPNVTSDAGGLCLKSGNAALLRGSSTALRS
                     NQAVAALLREGAAKAGLPEDSVILVEDVSHAAAVELMQLTGFVDCLIPRGGPSLVKSI
                     LDNAKVPYVIDGDGNCHVYVDAAADLDRALDIVLNAKTQRPSVCNAAESLLVHAGVAD
                     SFLPRVAEVLQAAGVELVGDEAARRLVPSIGEATDDDFGREFLDLKMSVAVVADVDAA
                     VAHVNRYGTGHTEAILTEDVGAARRFVAAVDAAAVTVNASTRFTDGEEFGFGAEIGIS
                     TQKLHARGPMALRELTTYKYVVWGDGQIRG"
BASE COUNT          283 a          702 c          795 g          309 t
ORIGIN      
        1 ggagaggatc tcgagcagga gggcctccgt ctcgagctcg acccggtcca cctcgtcgac
       61 gaggaggacc accggttcgg acgatcggat ggcctcgagg agcggccggg tgaggaggaa
      121 ctcctcggcg aagatgtcgt cctcgagctc ctgccacgac ttgtccgagt cggcttggat
      181 gcgcagcagc tgcttcttgt agttccactc gtagagggcc ttcgactcgt cgaggccctc
      241 gtagcactgg aggcggatca gccgggcgcc gctggtggcg gcgatggcct tggccagctc
      301 cgtcttgccg acgccggccg gcccctcgac gaggacgggc ttctccagcc ggtcggccag
      361 gaacacgacg ccggcggtcg acgggtcggc caggtagtcg acgcgccgca gggcctgctg
      421 cacggcgccg acggactcga agcgttcggc catgctcttc ctttcggggg acgcccccgg
      481 gcccccgggt tggttccgcc tttcgagggt gcggaccgca gttcgttgcg tgaagatact
      541 gagtctaacc gcggatctgg ccgtcccccc acacgacgta cttgtaggtg gtcagctccc
      601 gcagggccat cggcccccgg gcgtggagct tctgggtgga gatgccgatc tcggctccga
      661 agccgaactc ctcgccgtcg gtgaagcggg tcgaggcgtt gacggtcacc gcggcggcgt
      721 cgacggcggc gacgaagcgg cgggcggcgc cgacgtcctc ggtgaggatg gcctcggtgt
      781 ggccggtgcc gtagcggttg acgtgggcca cggcggcgtc gacgtcggcg accacggcga
      841 ccgacatctt caggtccagg aactcccggc cgaagtcgtc gtcggtcgcc tcgccgatgg
      901 acgggacgag gcggcgggcg gcctcgtccc cgaccagctc gacgccggcc gcctgcagca
      961 cctccgccac ccggggcagg aacgagtcgg ccacgccggc gtgcaccagc agcgattcgg
     1021 cggcgttgca cacgctcggc cgctgcgtct tggcgttgag gacgatgtcg agcgcccggt
     1081 cgaggtcggc ggcggcgtcg acgtagacgt ggcagttgcc gtcgccgtcg atcacgtagg
     1141 ggaccttggc gttgtcgagt atcgacttca cgagggacgg gccgccccgg gggatcaggc
     1201 agtcgacgaa gccggtcagc tgcatgagct cgacggcggc ggcgtgcgaa acgtcctcca
     1261 ccaggatgac cgagtcctcg gggagaccgg ccttggccgc cccctcccgc agcagcgccg
     1321 ccaccgcctg gttggaccgc agggcggtcg acgaaccccg caacagggcg gcgttgcccg
     1381 acttgaggca cagtccgccg gcgtcgctgg tgacgttggg ccggttctcg tagatgatcg
     1441 ccacgacgcc gagcggcacc cggacacggg agatctccag cccgttgggg cgcttccagc
     1501 cgtcgagcac ctcgccgacc gggtcgggca gcccggccac cttgcggagg ccggcggcca
     1561 tgccggccag ccgggcgtcg gtgaggcgga gccggtcgag cggaccgggc tccatgccgc
     1621 cggcggccgc cgcctccacg tcggcggcgt tggcctcgag gacgtcgccg ctgcgctgct
     1681 cgaggaggtc ggcggcggcc cggagcgcct cgtccttggc cgcggtcgac gccgtggcca
     1741 gctgccggga ggcggccttg gcccgccggc cgaggtcggc gacgccggag gagggcgggg
     1801 aagatgtctc catgacgcca ctctaccggc ggctcttccc cggcctcccg ccgaggggcg
     1861 cccctgtgaa acggctgagg cggcggccgg taatccgtcg gccccgggct gggcggcgtt
     1921 gctacgctgg gtttccggag agcgaaagcg acaatgctgg aggctcatcc gggcgcgttg
     1981 gggacgatcc tggcagagat gtcatgagga gccttcaggt tccggtcagg tcgtgcgacg
     2041 gtggtgcccg cacacgagcg gggaggtctg gggacgatgg atacgggaa
//
LOCUS       DATGJT010000564         2387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_802451, whole genome shotgun sequence.
ACCESSION   DATGJT010000564 DATGJT010000000
VERSION     DATGJT010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802451"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VKX24_09730"
     CDS             complement(<1..341)
                     /locus_tag="VKX24_09730"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLJ08808.1"
                     /translation="MANDRLAAACREHPDRFSALATIAPQDAKHAAAELDRCKKLGFV
                     GTIVNSHIQHEYLDDPKFWPIFEACEALDLPLYLHPNTPSKGLIAPMLDVRLEGAIFG
                     FAVETGLHLLRL"
     gene            complement(347..661)
                     /locus_tag="VKX24_09735"
     CDS             complement(347..661)
                     /locus_tag="VKX24_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08809.1"
                     /translation="MAPKLQTGGEVGYLRIATEEAFAPPELFAEWRRLLDAGLDDPGF
                     RSFFGFILTSDTPRAEFVRERLPDLGERRLADMDATGIDRQTSRSAHRDRILSNPTGP
                     PR"
     gene            complement(1006..2001)
                     /locus_tag="VKX24_09740"
     CDS             complement(1006..2001)
                     /locus_tag="VKX24_09740"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLJ08810.1"
                     /translation="MNGSALQRVVCRSFGTGDGVVVESAPIPEPGPGEVLIRTTAANV
                     SFVDRLIVRGGYQVRPSLPFTPGAVGAGEVVETGDGVSHLTAGTNVVVLKSGYGTWAT
                     HVLAPAWAVVPIPPNVADELAVAAIEAYGTASYALEERGGLRAGERVLVLGASGAVGA
                     AAVEIAVHLDAEVIAVTSEPTMWDGHPVEPHVVLDRRAVRLREAMKARFPDGIDVVLD
                     PVGGDLAELALRSLGPRGRYLVVGFASGDIPRLPANQILLRNRTVVGVEWATWITAHP
                     EHLARTLEVVLNRLARGVLHPPKPTLVTLDELPDVLLEPPPGAGLVRTVVVPSLS"
     gene            complement(1998..>2387)
                     /locus_tag="VKX24_09745"
     CDS             complement(1998..>2387)
                     /locus_tag="VKX24_09745"
                     /inference="COORDINATES: protein motif:HMM:NF018657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004144 - diacylglycerol O-acyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WS/DGAT domain-containing protein"
                     /protein_id="HLJ08811.1"
                     /translation="IYELIAAGSWCPAPLWRLVWKLWPRTYFPFHITSTNVPGPRRPL
                     FLGENELLHWYPFGVQWTNNGLFLCTLSYREYLTLGPVADPDVVPDVWGFADDLRAAY
                     EELRAAAGLAPAPRNRRRPRTVREPCP"
BASE COUNT          349 a          773 c          928 g          337 t
ORIGIN      
        1 aggcggagca ggtgcaggcc ggtctcgacg gcgaagccga agatggcgcc ttcgagtcgc
       61 acgtcgagca tcggcgcaat caggcccttg gatggcgtgt tggggtggag atagagcggc
      121 aggtcgagcg cctcgcacgc ctcgaagatg ggccagaact tcgggtcgtc gaggtactcg
      181 tgctggatgt gggaattgac gatcgtgccg acgaagccga gctttttgca ccggtccagt
      241 tccgccgcgg cgtgcttggc gtcttggggt gcgatggtgg ccagggcgct gaagcggtcg
      301 gggtgctccc ggcaggcggc ggccagccgg tcgttggcca acgtagttat cgcggcggcc
      361 cggtcgggtt cgagaggatt cggtcccggt gcgctgatcg agaggtctgg cggtcgatgc
      421 cggtggcgtc catgtcagcc aggcgtcgtt ccccgagatc cggcagccgt tcgcgtacga
      481 actcggcccg tggggtgtcg ctggtcagga tgaagccgaa gaacgagcgg aatcccggat
      541 cgtcgagacc ggcgtcgagc agccggcgcc actcggcgaa cagttcgggc ggcgcgaagg
      601 cctcctcggt ggcgatgcgg agataaccca cctctccgcc ggtctgcagc ttcggggcca
      661 cggcgcgaac ttaccgcgcc ggtgcgccag ccggacgggg cgcacgttcg tttggcacgt
      721 cggcgacggc gtggtcgtgg cctacgacac gctggcggac cacgaggtgg ccaaggcgat
      781 ctccggagcg ggtgggacgc ggtgggcgcg accgagtccc ggcggtgctc ctggcgcgcc
      841 tcgccctcga cggggtgctt cgcggtcagc tcgggcgctt ctcctggccg acgtcttcag
      901 ctgggcggtc gaagcgagca tgaaaggtcg ccgtccgggt ggttgtcgcg gacgccatcg
      961 acgccgacgg ttacacactc cgtccgacgg tccctcggca gtcgctcagg acagggaggg
     1021 aacgacgacg gtcctgacga gcccggcgcc ggggggcggc tccaggagga cgtcggggag
     1081 ttcgtcgagc gtcaccagcg tgggcttggg cgggtggagg acaccgcggg cgagccggtt
     1141 gaggacgacc tcgagcgtgc gggcgaggtg ctccggatgg gcggtgatcc atgtcgccca
     1201 ctcgacgccg acgacggtgc ggttgcggag caggatctgg ttggcgggga gcctggggat
     1261 gtcgccgctg gcgaagccga cgacgaggta gcggccgcgg gggccgagcg agcgcagggc
     1321 gagctcggcg aggtcacccc cgaccgggtc gagcacgacg tcgatcccgt ccggaaatcg
     1381 ggccttcatc gcctcacgga ggcgcacggc ccgccggtcg aggacgacgt gcggctccac
     1441 cggatggccg tcccacatcg tcggctccga cgtcacggcg atcacttcgg cgtcgaggtg
     1501 gacggcgatc tccacggcgg cggcgccgac cgccccgctg gcccccagga cgaggacccg
     1561 ttcgccggcc cggagcccgc cgcgctcctc gagggcgtag ctggcggtcc cgtaggcttc
     1621 gatcgccgcc acggcgagct cgtcggcgac gttgggcggg atgggtacca cggcccaggc
     1681 cggagccagg acgtgcgtcg cccaggtccc gtagccgctc ttcaggacga ccacgttcgt
     1741 gccggcggtc aggtggctga cgccgtcgcc ggtctcgacc acctcgccgg cgccgacggc
     1801 acccggggtg aacggcagcg agggccgcac ctggtacccg ccccgcacga tgagccggtc
     1861 cacgaacgac acgttggcgg cagtggtgcg gatcaagacc tcgcccggcc ccggttccgg
     1921 gatgggcgcc gactcgacga cgacaccgtc gccggtgcca aacgaccggc agaccactcg
     1981 ttgcagcgca gagccgttca tgggcacggt tcccttacgg tgcgggggcg ccggcggttg
     2041 cggggggcgg gagccagccc ggcggccgcc cggagctcct cataggcggc ccgcagatca
     2101 tcggcgaagc cccacacgtc ggggacgacg tcggggtcgg cgacgggccc gagcgtgagg
     2161 tactcccggt agctgagcgt gcagaggaac aggccgttgt tcgtccactg cacgccgaac
     2221 gggtaccagt gcagcagctc gttctccccg aggaagagcg gccggcgggg gccgggcaca
     2281 ttggtggagg tgatgtggaa cgggaaatag gtccgaggcc agagcttcca gaccagccgc
     2341 cacagcggcg ccgggcacca gctgccggcg gcgatcagct cgtagat
//
LOCUS       DATGJT010000565         2015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1213490, whole genome shotgun sequence.
ACCESSION   DATGJT010000565 DATGJT010000000
VERSION     DATGJT010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1213490"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /locus_tag="VKX24_09750"
     CDS             <1..706
                     /locus_tag="VKX24_09750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08812.1"
                     /translation="GQQYYWEDNDPTAEASNLAATRIWVASGNGTPGPLDGVLGSPVL
                     QEDAAIEAVVDDMSQHFVAAVRAAGLGGQLTTDFYGDGVHAWSYWQADLGRFLVWLAP
                     QLGRPRPAPSPFSFENARIDSSAWGWTFSHHSGLSIPNVNTAEEFVYLTRVSKSGLTA
                     AGHGSLTVTTPPGTYRRSSVHTVTAGGVTQRLTASPGGSLSFRVPLGPNATVAQTDFP
                     ASGPPPGTPRVRVTIH"
     gene            complement(867..1922)
                     /locus_tag="VKX24_09755"
     CDS             complement(867..1922)
                     /locus_tag="VKX24_09755"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLJ08813.1"
                     /translation="MARRVGLSSNVTARDQLSHDRHPEAGIQPLPDGQGGRAGAGAVG
                     IAHDTTPLTFLVIGDHGGVKDPDPQNAVSNAMQARVVAQPVPSFVYSVGDIVYYNGDA
                     TEYGPQFYEAYGHLQLPIVGIPGNHDGDTTDGPSRTPLDTFMANFCSASPALPKGNEE
                     YGRDTETQPYCDWTLQLAGVTIVGVYTNVPSGGHLETVQTDWLTAELKAAATDRPLIV
                     TLHHPPYSIDAMHGGSAKMASALDAAFQASGRTPDLVLSGHVHDYQRFTRVIGTASVP
                     YIVIGNGGYHNLHRLAADAQPGEELSPGVTFEYGDDKNWGYLELTVQGSTISGSYTSV
                     TKEGAATAGADTWSTGA"
BASE COUNT          265 a          687 c          732 g          331 t
ORIGIN      
        1 cggccagcag tactactggg aggacaacga cccgactgcc gaggcgtcca acctggccgc
       61 caccaggatc tgggtcgcct ccggcaacgg gacgcccggc ccgctcgacg gggtgctcgg
      121 cagcccggtc ctccaggagg acgcggcgat cgaggcggtc gtcgacgaca tgagccagca
      181 cttcgttgcg gcggtgaggg ctgccgggtt gggggggcag ctcaccaccg acttctacgg
      241 cgacggtgtc cacgcctggt cctactggca ggccgacctc ggccggttcc tggtctggct
      301 ggcgccgcag ctcggccgcc ctcggcccgc tccctcgccg ttctcgttcg agaacgcccg
      361 catcgactcc tcggcctggg gctggacctt ctcccaccac tccgggctgt cgatcccgaa
      421 cgtcaacacc gccgaggaat ttgtctacct gacaagggtg tcgaagtcgg gcctgaccgc
      481 cgccggacac ggcagcctga cggtcacgac gcccccgggc acctaccgtc gctcctcggt
      541 gcacaccgtg accgcgggcg gggtcacgca gcgcttgacc gccagccccg gcgggtcgct
      601 gtcattccgg gtgccgctcg gcccgaacgc caccgttgcc cagaccgact tccccgcctc
      661 cgggcccccg ccgggcacgc cacgggtccg ggtgacgatc cactagcgcg cgggcctcta
      721 gcagggggcc gctcgcaatg gcgcggtgga ttttcaacga tttcggccaa aatccaccac
      781 gccatcagaa tgcggagcgt acgcaagcgg ccagggccgg ccgccggccg gctggtgggt
      841 ggtcgagacg gtgagcagca cctggctcag gccccggtgc tccaggtgtc ggcgccggcg
      901 gtggcggccc cctccttggt gaccgaggtg tagctgccgc tgatcgtcga gccctggacc
      961 gtcagctcca ggtagcccca gttcttgtcg tcgccgtact cgaaggtgac gcccggcgac
     1021 agctcctcgc cgggctgggc gtcggcggcc agtcggtgca ggttgtggta gccgccgttg
     1081 ccgatgacga tgtacgggac gctggccgtc ccgatcaccc gggtgaaccg ttggtagtcg
     1141 tggacgtggc cggacaggac caggtccggg gtacgcccgc tcgcctggaa cgccgcgtcg
     1201 agggcggacg ccatcttggc cgagcccccg tgcatggcgt cgatcgagta gggcgggtgg
     1261 tgcagcgtga cgatcagcgg tcggtcggtc gccgccgcct tcagctcggc ggtgagccaa
     1321 tcggtctgca ccgtttcgag gtggccgccg gaggggacgt tggtgtacac gccgacgatc
     1381 gtgaccccgg cgagctgcag cgtccagtcg cagtagggct gcgtctcggt gtcccgcccg
     1441 tactcctcgt tgcccttggg cagggccggg ctggccgagc agaagttggc catgaaggta
     1501 tccagcgggg tgcggctcgg gccgtcggtg gtgtcgccgt cgtggttgcc cgggatgccg
     1561 acgatcggca gctgcaggtg gccgtaggcc tcgtagaact gcgggccgta ctcggtggcg
     1621 tcgccgttgt agtacacgat gtcgccgacg ctgtagacga acgacggcac cggctgggca
     1681 acgacccgtg cctgcatggc gttggacacg gcgttctgcg ggtccgggtc cttgaccccg
     1741 ccgtggtcgc cgatcaccag gaaggtcagc ggtgtggtgt cgtgcgcgat gcccaccgct
     1801 ccggcccccg cccggcctcc ctggccatcg gggaggggct ggatcccggc ttcggggtgg
     1861 cgatcgtggg agagctggtc gcgggcagtg acgttggagg agaggccgac gcggcgcgcc
     1921 atgagcgttc ctttcaggtc gagacgggga ctcgtagggt tcgatcagcc tacgagttct
     1981 ccgggccctc gggaaccccc tgttttgctc ggtgg
//
LOCUS       DATGJT010000566         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1007735, whole genome shotgun sequence.
ACCESSION   DATGJT010000566 DATGJT010000000
VERSION     DATGJT010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1007735"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..179
                     /locus_tag="VKX24_09760"
     CDS             6..179
                     /locus_tag="VKX24_09760"
                     /inference="COORDINATES: protein motif:HMM:NF021981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S26 family signal peptidase"
                     /protein_id="HLJ08814.1"
                     /translation="MVKRVAALAGGRVEVRGDNAAASTDSRHFGPVARAAVVGRVVYR
                     YHPEERRGRLPGG"
     gene            276..788
                     /locus_tag="VKX24_09765"
     CDS             276..788
                     /locus_tag="VKX24_09765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="aerial mycelium formation protein"
                     /protein_id="HLJ08815.1"
                     /translation="MPEQRRLDRVLEPAYLEGLAERTVDELSAMKAECVDLETEVSFV
                     RRLAQGRIDILDAERDRRASGGAFEDLIGSLSKILADEGPRPAPSQAHLPQRMAPSPA
                     IEWTRGLEPLVGDSTLVRLPDLSDAELADAREQLSALEREVSAKRRTLHDVLHTLEIE
                     LAERIQAARS"
     gene            785..1183
                     /locus_tag="VKX24_09770"
     CDS             785..1183
                     /locus_tag="VKX24_09770"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ08816.1"
                     /translation="MTEASSEPTGTEAVDDRCVLVVDDDAVLRRVVRAVLEADGFRVL
                     EAHDGQQGLELAASERPRVVILDVMMPGLDGVEVCRRLDHKATRVLMLTALGDVTTEV
                     ASLEAGARGYLTKPFSSMELLDRVEELLRQ"
     gene            1180..1914
                     /locus_tag="VKX24_09775"
     CDS             1180..1914
                     /locus_tag="VKX24_09775"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HD-GYP domain-containing protein"
                     /protein_id="HLJ08817.1"
                     /translation="MSEGAAPRWDPASIPDPTAALEAQLLVFAKELGEGYQRERERAQ
                     HLEQALGDLRHAYLQTVRSLALVVEAKDASTGQHIERCRLYGMALLAEMGLADENREA
                     EFGFLLHDCGKVGIPESVLNKPGPLTAAEWRVMRTHPIIGYQLVADIPFLKTAAQVVR
                     CHHEMFDGTGYPAGLRGEQIPLAARVFSVVDAFDAMTADRPYRAALPVEAAVEELQKM
                     AGTQFDPEVVRVFAPLSEQLIPRTAA"
BASE COUNT          287 a          765 c          730 g          279 t
ORIGIN      
        1 gggtgatggt caagcgggtg gccgcgctgg ccggcggccg cgtcgaggtg cggggcgaca
       61 acgccgccgc cagcaccgac agccgtcatt tcggccccgt cgcccgggcc gccgtcgtcg
      121 gccgcgtcgt ctaccgctac caccccgagg aacggcgcgg ccgcctgccg ggcggctgag
      181 cccccgagcc cactctgacc ggcggcctcc ggaggtagcc tgggaggtcg caacccgatc
      241 cctgatcgcc ctgatctctg atcccatgga gtgacatgcc ggagcaacgc cgtctggacc
      301 gggtcctcga gccggcctac ctcgagggtc tggccgagcg cacggtcgac gagctgtcgg
      361 ccatgaaggc ggagtgcgtc gacctcgaga ccgaggtctc gttcgtgcgc cgcctggccc
      421 agggccggat cgacatcctc gacgccgagc gcgaccggcg ggccagcggc ggggccttcg
      481 aggacctgat cgggagcctg tcgaagatcc tggccgacga gggtccgcgg ccggcgccgt
      541 cgcaggccca cctgccccag cggatggcgc cgtcaccggc gatcgagtgg acgcggggcc
      601 tcgagccgct cgtcggcgac tcgacgctcg tccggctgcc cgacctgtcc gacgccgagc
      661 tggccgacgc ccgcgagcag ctctccgccc tcgaacggga agtgtcggcc aagcggcgga
      721 cgctccacga cgtgctccac acgctcgaga tcgagctcgc agaacggatc caggcggccc
      781 ggtcgtgacc gaagcgtcct ccgagcccac cggcaccgag gcggtcgacg accgctgcgt
      841 gctggtggtc gacgacgacg ctgtcctccg ccgggtcgtg cgggcggtcc tcgaggccga
      901 cgggttccgg gtcctcgagg cccacgacgg ccagcagggc ctggagctgg ccgcctcgga
      961 gcggccccgg gtcgtgatcc tcgacgtgat gatgccgggc ctcgacggcg tcgaggtctg
     1021 ccgccggctc gaccacaagg cgacccgggt cctcatgctc accgccctcg gcgacgtgac
     1081 caccgaggtg gcctccctgg aggccggggc ccgcggctac ctgacgaagc cgttcagctc
     1141 catggagctg ctcgaccggg tcgaggagct cctccgccag tgagcgaggg cgctgcgcct
     1201 cggtgggatc cggcgtcgat ccccgacccg accgccgccc tcgaggccca gctgctggtg
     1261 ttcgccaagg agctcggcga gggctaccag cgggagcggg agcgggccca gcacctcgag
     1321 caggcgctcg gcgacctccg ccacgcctac ctgcagacgg tccggtcgct ggccctggtg
     1381 gtcgaggcga aggacgcctc caccggtcag cacatcgaac ggtgccgcct ctacggcatg
     1441 gcgctgctgg ccgagatggg gctggccgac gagaaccggg aggcggagtt cggcttcctg
     1501 ctccacgact gcgggaaggt cggcattccc gagagcgtcc tcaacaagcc cggccccctg
     1561 accgccgccg aatggcgggt gatgcggacg cacccgatca tcggctacca gctcgtggcc
     1621 gacatcccct tcctcaagac ggcggcccag gtcgtgcgct gccaccacga gatgttcgac
     1681 gggacgggct accccgccgg cctgcgggga gagcagatac cgctggccgc ccgggtgttc
     1741 tcggtcgtcg acgccttcga cgccatgacc gccgaccggc cctaccgggc ggcgctgccg
     1801 gtggaggcgg ccgtcgagga gctgcagaag atggccggca cccagttcga cccagaagtg
     1861 gtccgggtct tcgcccccct gagcgagcag ctgatccctc gcacggccgc ttgagattgg
     1921 gagcttcacc tgcctccccg gagacgcatg cggccgtcgc cttcgccgag ctgggcggat
     1981 tcatccggga ccagcgccgc atggcccgcc tgtcgctccg gaagctgtcc gaactcgccg
     2041 ggatctccaa cccctacctg a
//
LOCUS       DATGJT010000567         3405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_283462, whole genome shotgun sequence.
ACCESSION   DATGJT010000567 DATGJT010000000
VERSION     DATGJT010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283462"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..868
                     /gene="rnc"
                     /locus_tag="VKX24_09780"
     CDS             80..868
                     /gene="rnc"
                     /locus_tag="VKX24_09780"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HLJ08818.1"
                     /translation="MAESSLDRLEDLLGRPFEDRELLARALAHRSFCAENPTFESNER
                     LEFLGDAVLGLVVTDYIYRAFPHLPEGELAKVRASVVNAGVLAELATEIELGTFVLLG
                     KGEGLSGGREKPSILADAMEAVLAATYLDGGWDAAYKLVMALLGERIAAAAEGPGGQD
                     YKTRLQELAARRFDQMPRYEVRDEGPDHAKRFYANVVLQGTPRGRGEGRSKKQAEQAA
                     ARMAWEWLRESEAAVAAAEAARAAEAAAAVADGFEDGDAPTGAG"
     gene            878..1699
                     /gene="mutM"
                     /locus_tag="VKX24_09785"
     CDS             878..1699
                     /gene="mutM"
                     /locus_tag="VKX24_09785"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HLJ08819.1"
                     /translation="MPELPEVEVVRRGLEREVAGREVTAAVVTGVRTVRRQPPEELVA
                     RLRGARLGPAGRIGKFLAVPLDDGAETLVIHLRMSGQLLLTSPSWPRSRHTHAVLSLS
                     DGRELRFVDPRTFGELFVAPSPVEALAHLGPDPLSGRWSAAALGRALAGRSARLKPLL
                     MDQRFVAGIGNIYSDEALFEARLRFDRPAGSLSAEEVGRLHRAVRTTLREAVRLRGSS
                     LSDGQYVDLFGAPGGYQSRHRVYGREGQPCPRCGGPVRRLAVGGRSTFFCETCQP"
     gene            1696..1977
                     /locus_tag="VKX24_09790"
     CDS             1696..1977
                     /locus_tag="VKX24_09790"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010995051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HLJ08820.1"
                     /translation="MSGGEPVRRRVLISGRVQGVGFRWSCQRVADSLSLSGWCRNLPD
                     GRVEAVFEGDPKAVEQAVAWCRGGPPSALVTAVDVVPEMPDGLRGFGLR"
     gene            2053..>3405
                     /locus_tag="VKX24_09795"
     CDS             2053..>3405
                     /locus_tag="VKX24_09795"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ08821.1"
                     /translation="MFLKRLTVKGFKSFADRTSLDFEPGVAVVVGPNGSGKSNVVDAV
                     AWVLGAQGARSLRGGKMEDVIFAGTPKRSASGKAEVSLTLDNSGNDLPVPSREVTITR
                     ALTRDGESTYAINGEPCRLLDITELLSHTGMGRTQHVIVGQGRLDAILQARPEDRRAV
                     IEEAAGILKYRQRKEKAERRLEATALNMERLGDLVKEVRRHLRPLERQADAARRHGGL
                     TEELRAIRLHLTGREITTLTERLAGLGEKRERFGAEEAVAREQAAALEASVVESEAAL
                     AVPADSLGDAVTMAEALLARARGLGDLVAEKRRNIDRSLVALADAGVVETLTAEAATL
                     RSDLASASGEEAALAPRRAELDAIEDTLEERRAELGPAGDLPARKAAAEARAELAALA
                     GTVARTEAERSRLEGRREPVRRRLARLAEEEAAAGGEDFDEAPLVAALESARAARETA
                     E"
BASE COUNT          407 a         1196 c         1383 g          419 t
ORIGIN      
        1 acctggccga gctgcgcacc gtccgcgacg ccgtcgacta cgtcgtcgag cgggtgggct
       61 gaggggagcc ggcgagccgt tggccgagag ctccctcgac cgcctggagg acctgctggg
      121 gcgacccttc gaagaccggg agctcctggc ccgcgccctg gcccaccggt cgttctgcgc
      181 cgagaacccc acgttcgagt cgaacgagcg cctggagttc ctcggcgacg ccgtcctcgg
      241 cctggtggtc accgactaca tctaccgggc cttcccccac ctgccggagg gcgagctggc
      301 caaggtgcgg gcgtcggtgg tcaacgccgg cgtcctcgcc gagctggcca ccgagatcga
      361 gctcggcacg ttcgttctgc tggggaaggg cgaggggctc tcgggagggc gggagaagcc
      421 gtcgatcctg gccgacgcca tggaggcggt gctggcggcc acctacctcg acggcgggtg
      481 ggacgccgcc tacaagctgg tcatggccct gctgggggag cggatcgccg ccgccgccga
      541 ggggcccggc ggacaggact acaagacccg gctccaggag ctggccgccc gccggttcga
      601 ccagatgccc cgctacgagg tgcgggacga agggccggac cacgccaagc ggttctacgc
      661 caacgtcgtc ctgcagggga cgccccgggg ccggggcgag ggccggtcga agaagcaggc
      721 cgaacaggcc gccgcccgca tggcctggga gtggctgcgg gagtcggagg cggcggtggc
      781 cgccgccgag gcggcccggg cggccgaagc ggccgcggcg gtggccgacg gattcgagga
      841 cggggacgcg ccgacgggag ccgggtgagg cccccgggtg ccggaactcc ctgaggtcga
      901 ggtcgtccgc cgggggctcg agcgggaggt cgccggccgg gaggtgacgg cggcggtcgt
      961 caccggcgtc cggaccgtgc gccgacagcc gcccgaggag ctcgtggccc ggctgcgggg
     1021 ggcgcggctg gggcccgccg gccggatcgg caagttcctc gccgtaccgc tcgacgacgg
     1081 cgccgagacg ctggtgatcc acctgcggat gtcgggccag ctcctgctga cgtcgccgtc
     1141 ctggccgcgg tcccgccaca cccatgcggt gctgtccctg tcggacgggc gggagctgcg
     1201 cttcgtcgat ccccgcacgt tcggcgagct gttcgtggcg ccgtcccccg tcgaggccct
     1261 ggcccatctc gggccggatc cgctgtcggg gcggtggtcg gcggcggcgc tggggcgggc
     1321 cctggccggc cgcagcgccc ggctcaagcc gctgctcatg gaccagcggt tcgtggccgg
     1381 gatcgggaac atctactccg acgaggccct gttcgaggcc cggctgcgtt tcgaccggcc
     1441 ggccggctcc ctgtcggccg aggaggtggg gcgtctccac cgggccgtgc ggacgacgct
     1501 gcgggaggcg gtccggctcc gggggtcgtc gctgtccgac ggccagtacg tcgacctctt
     1561 cggggcgccc ggcggctacc agtcccggca ccgggtctac ggccgggagg ggcagccgtg
     1621 cccccgctgc ggtggccccg tccggcggct ggcggtcggc ggccggtcga cgttcttctg
     1681 cgagacgtgc cagccgtgag cggcggggag ccggtccgcc ggcgggtgct gatctccggg
     1741 agggtgcaag gcgtgggctt ccggtggtcc tgccagcggg tggccgactc cctgagcctg
     1801 tccggctggt gccgcaacct tcccgacggc cgggtggagg cggtgttcga gggagatccc
     1861 aaggcggtgg agcaggccgt ggcctggtgc cggggcggcc ctccgtcggc cctcgtgacg
     1921 gcggtcgacg tcgtcccgga gatgcccgac ggcctgcggg gattcggcct ccggtagttc
     1981 gtcggcggtg cacctggcag ggcctggggg atccgcgctc cggcggggcc cggccgttag
     2041 gttggaccgg cgatgttcct gaagcggctg accgtcaagg gcttcaagtc cttcgccgac
     2101 cggacgagcc tcgatttcga gccgggcgtg gccgtggtgg tcgggcccaa cgggtcgggg
     2161 aagtccaacg tcgtcgacgc cgtggcctgg gtcctcgggg cccagggcgc ccggtcgctg
     2221 cggggcggga agatggagga cgtcatcttc gccggcacgc cgaagcggtc ggcctcgggg
     2281 aaggccgagg tgtcgctgac cctcgacaac tccggcaacg acctcccggt gccgagccgg
     2341 gaggtcacca tcacccgggc gctgacccgc gacggcgagt cgacctacgc catcaacggg
     2401 gagccgtgcc ggctcctcga catcaccgag ctgctgtccc acaccgggat gggccggacg
     2461 cagcacgtca tcgtcggcca gggccgcctc gacgccatcc tccaggcccg cccggaggac
     2521 cggcgggcgg tgatcgagga ggcggcggga atcctcaagt accgccagcg caaggagaag
     2581 gccgagcggc gcctcgaggc gacggcgctc aacatggagc gactcggcga cctcgtgaag
     2641 gaggtccgcc gccacctccg gccgctggag cgccaggccg acgccgcccg ccgccacggg
     2701 gggctcaccg aggagctccg cgccatccgc ctccacctga cggggcggga gatcacgacg
     2761 ctcacggagc ggctggccgg gctcggcgag aagcgggagc gcttcggagc cgaggaggcc
     2821 gtggcccggg agcaggcggc ggcgctcgag gcctcggtcg tcgagtcgga ggcggcgctg
     2881 gccgtcccgg cggactccct gggcgacgcc gtcaccatgg ccgaggcgct cctggcccgg
     2941 gcccgtgggc tcggcgacct ggtggccgaa aagcggcgca acatcgaccg gtcgctggtg
     3001 gcgctggccg acgccggcgt ggtcgagacg ctgaccgccg aggcggccac gctgcgttcc
     3061 gacctggcgt cggcgtccgg ggaggaggcg gcgctggcgc cccgccgggc ggagctcgac
     3121 gccatcgagg acacgttgga ggagcggcgg gccgagctcg ggcccgccgg cgacctgccg
     3181 gcccggaagg cggcggccga ggcccgggcg gaactggccg ccctggccgg gacggtggcc
     3241 cgcaccgagg cggagcggtc gcggctggag gggcggcgcg agcccgtccg gcgccggctg
     3301 gcccggctgg ccgaggagga ggccgccgcc ggcggcgagg acttcgacga ggcgccgctg
     3361 gtcgccgccc tggagtcggc ccgtgcggcg cgcgagaccg ccgag
//
LOCUS       DATGJT010000568         2933 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1524157, whole genome shotgun sequence.
ACCESSION   DATGJT010000568 DATGJT010000000
VERSION     DATGJT010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524157"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VKX24_09800"
     CDS             <1..282
                     /locus_tag="VKX24_09800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08822.1"
                     /translation="GGVSEPETPQGRKALEGLRAFWTATGQDDGAFDPTALSLECADD
                     ERGCTANVGFDAFADTVEPTTDTAEAIDRLRRAWKTTLAREGKLHDPQE"
     gene            complement(288..2237)
                     /locus_tag="VKX24_09805"
     CDS             complement(288..2237)
                     /locus_tag="VKX24_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08823.1"
                     /translation="MRRFRRAANTGVVFGAALALLMVYPGTSFGSSSPSLDSAMQQAR
                     QRAEAINNVNDVPKVVQNVVPGAVQARDLAIQQFKAAQVAGKAPLDSKPEYTVIWSGK
                     ENAGDMSGNDTMRFINQGSISPTGLINVGSKQFIPGLDAMVVVDVRKLNVDGSMNKDY
                     GKVVNFVQVPPPFGVESEPHHMQYEWHAGEPIVAGHLFTDLTTIWDVSSIPEITLKNI
                     VRGEENPIGAFPDAFDFAGKDAIGTYMTAGEPNYGGSPGSVVVFKPDSSKGMVQASET
                     AASQVGAVFRGNPGGVPEPCTPAEARPAMTCGNPHGIQARPDLNRMITTDYADARELG
                     SDPLKTTEQHAFRPTARIWDISNPEAPKLISVGHMPASVKHPPNPAHDNLGIMETGKT
                     FAPSKAVFAESMCGGGIFMLPDITNVQPDSSSQWKQVWDDGMTELQVPNYTNLGSGKG
                     NGAEPGACAGGAWTQISHDNRFLFHTVGGRNPGSTNTFDNGTPKMVYVINVEKLIKHA
                     EQTGNVDCTITSGREIGQGHGDAADCPTLAGVLTVDDNTSGGPHWAGIDNHNLTASGA
                     PTRLLFCDYFVARTGYDGNHRCYMVDIDPQTGGLSYDTAFRDEYNSSLGIDFNRRDWP
                     GHPGAGWYKPHSMLWVVPEAVAGSG"
     gene            complement(2559..>2933)
                     /locus_tag="VKX24_09810"
     CDS             complement(2559..>2933)
                     /locus_tag="VKX24_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015802787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ08824.1"
                     /translation="RVVANLVRNAETHGRGLASVRVVVAGDRLRIEVEDRGAGVPPED
                     RERIFERFYRRSAEAGDRGSGGGVGLGLALVAQHMRLHDGRVWVEDATPSGARFVVEI
                     PMNTSRLQSFHSGIEDHIHTSL"
BASE COUNT          437 a          962 c         1029 g          505 t
ORIGIN      
        1 ggaggagtga gcgagccgga gacaccgcag gggcgcaagg ccctggaggg cctgcgggcc
       61 ttctggaccg ccaccggcca ggatgacgga gcgttcgacc cgaccgcgct gagcttggag
      121 tgcgccgacg acgagcgggg ctgcaccgcc aacgtcggct tcgacgcctt cgccgacacg
      181 gtcgagccca ccaccgacac cgccgaggcg atcgaccgcc tccggcgggc ctggaagacg
      241 acgctagccc gcgaaggcaa gctccacgat ccgcaggagt agctcgctca gccgctcccg
      301 gcgaccgcct cgggcacgac ccagagcatg gagtggggct tgtaccagcc cgcgccgggg
      361 tggccgggcc agtcccggcg gttgaagtcg atcccgagcg aggagttgta ctcgtcccgg
      421 aaggcggtgt cgtagctgag cccaccggtc tgcgggtcga tgtcgaccat gtagcagcga
      481 tggttgccgt cgtagcccgt ccgggcgacg aagtagtcgc agaacaggag ccgggtcggc
      541 gcaccgctgg ccgtcaggtt gtggttgtcg atgccggccc agtgcgggcc acccgacgtg
      601 ttgtcgtcga ccgtcagcac accggccagc gtcgggcagt cggcggcgtc gccgtggccc
      661 tggccgatct cccggccgct ggtgatggtg cagtcgacgt tgccggtctg ctcggcgtgc
      721 ttgatgagct tctcgacgtt gatgacgtag accatcttcg gcgtgccgtt gtcgaaggtg
      781 ttcgtcgacc ccgggttgcg cccgccgacg gtgtggaaca ggaaccggtt gtcgtggctg
      841 atctgggtcc aggcgccgcc ggcgcaggcg ccgggctcgg cgccgttgcc cttgccggaa
      901 ccgaggttgg tgtagttcgg gacctggagc tcggtcatgc cgtcgtccca gacctgcttc
      961 cactgactgg aggagtcagg ctggacgttg gtgatgtcgg gcagcatgaa gatcccgccg
     1021 ccgcacatcg actcggcgaa gacggccttc gacggggcga aggtcttgcc ggtctccatg
     1081 atgccgaggt tgtcgtgggc cgggttcggc gggtgcttca cgctcgccgg catgtggccc
     1141 accgagatca gcttcggcgc ctcggggttc gagatgtccc agatccgggc cgtgggccgg
     1201 aaggcgtgct gctccgtcgt cttcagcggg tcggagccga gctcccgggc gtcggcgtag
     1261 tcggtggtga tcatccggtt gaggtcgggc cgggcctgga tgccgtgcgg gttgccgcag
     1321 gtcatggccg ggcgggcctc cgccggggtg cagggctcgg gaacgccgcc cgggttcccc
     1381 cggaacacgg ccccgacctg gctggccgcc gtctcggacg cctgcaccat gcccttcgag
     1441 gagtccggct tgaacacgac gaccgacccc ggcgatccgc cgtagttcgg ctcaccggcg
     1501 gtcatgtagg tgccgatggc gtccttgccg gcgaagtcga aggcgtcggg gaaggccccg
     1561 atcgggttct cctcgccccg cacgatgttc ttcagcgtga tctccggaat gctgctcacg
     1621 tcccagatcg tcgtcaggtc ggtgaacagg tggccggcca cgatcggctc gccggcatgc
     1681 cactcgtact gcatgtggtg cggctcgctc tccaccccga acgggggcgg gacctggacg
     1741 aagttgacga ccttgccgta gtccttgttc atcgagccgt cgacgttgag cttgcggacg
     1801 tcgaccacga ccatggcgtc gagcccgggg atgaactgct tgctgccgac gttgatgagg
     1861 cccgtcgggc tgatcgagcc ctggttgatg aaccgcatcg tgtcgttgcc gctcatgtcg
     1921 ccggcgtttt ccttgccgga ccagatgacg gtgtactcgg gcttgctgtc gagcggcgcc
     1981 ttgcccgcga cctgcgccgc cttgaactgc tggatggcca ggtcccgggc ctggacggcg
     2041 ccggggacga cgttctggac gaccttcggt acgtcgttga cgttgttgat ggcctccgcc
     2101 cgctgccggg cctgctgcat cgccgagtcc agcgacggcg acgagctccc gaacgaagtg
     2161 cccggataga ccatcaagag agcgagcgcc gcaccgaaga caactccggt gttggcggcg
     2221 cgccgaaatc tcctcatcca atccccccct acacgtgagt gctgcttcga gactacgaat
     2281 gtgcgatgaa ttgggagggc ctaccggccg ccctttaggc cgaaagacct gggctccaca
     2341 tctacgtccc cagcggaagc ctgtcaaggt ttccgtatat tcgcagccag cgtttttctt
     2401 cccgatgacg gagagattgc gaagatttca ttccggtttc cggggaacgc gcaagcgtgg
     2461 ccatgggggc gagaccatgg ccacgctcga gctcagggag atcgacacga gagaggcggc
     2521 gtcgatctgt gaaaaccgta acccggcggg ggccgatttc acaacgatgt atgtatgtgg
     2581 tcctcgatac cggaatgaaa tgattgcaac cgggatgtat tcatcggtat ctcgaccacg
     2641 aagcgggctc cggacggggt ggcgtcctcg acccagaccc gtccgtcgtg gagccgcatg
     2701 tgctgggcca cgagggccag gccgagcccg acgccgccgc cgctgccccg gtcgcccgct
     2761 tccgcggagc ggcggtagaa gcgctcgaag atccgctccc ggtcctcggg cgggacaccg
     2821 gcgccgcggt cctcgacctc gatccgcagc cggtcgccgg ccacgacgac ccgcaccgag
     2881 gccagccccc ggccgtgcgt ctcggcgttg cgcacgaggt tggccaccac ccg
//
LOCUS       DATGJT010000569         3217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_907497, whole genome shotgun sequence.
ACCESSION   DATGJT010000569 DATGJT010000000
VERSION     DATGJT010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3217
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_907497"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..984
                     /locus_tag="VKX24_09815"
     CDS             <1..984
                     /locus_tag="VKX24_09815"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF001770.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HLJ08825.1"
                     /translation="ICKHLVGQARRFGADSVAHGCTGKGNDQVRFEVSLGALAPDLTV
                     LAPVREWGMNREQTQAYGLARGLPVRAGAAAPYSIDENLWGRAIECGALEDPMTEAPE
                     DVWERTVSPAKAPSEPAYVEIAFQNGIPVGLDGESLRPATVIRRLDALAGSYGVGRLD
                     MVEDRVVGIKSREVYEVPAASVLIAAHSDLEELTLEREVLRAKRHLEVRYGELVYEGQ
                     WFSPLRDALDAFNASTQRYVNGKVRVKLEAGSARVVGRSSAGSLYDLSLATYDTGDAF
                     EHTAAQGFVKLWGLPTKTWARAHVADAGAAPAGDTGGAAPAGEAAPAEPGA"
     gene            981..2390
                     /gene="argH"
                     /locus_tag="VKX24_09820"
     CDS             981..2390
                     /gene="argH"
                     /locus_tag="VKX24_09820"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007520004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HLJ08826.1"
                     /translation="MTADKPLWAGRFARPPAEALRAFTVSLPYDQRLWREDLASTAAH
                     ARTLERAGILTPEERVMIESVCDEAATEFESGTFAFDPTDEDIHSAVERFLTGRLGDI
                     GAKIHAGRSRNDLVASDLRLWAKGASLAVAGGVTGLESTLLAQAEAHAGTLAPGYTHL
                     QRAQPILLAHHLLAHAFALSRDFARLIRAYRAADVSVLGAAAFAGTSLPLDPLETAAD
                     LGFAAAFDNAADAVSDRDFVLELLAAGAILGVHLSRLGEEIVLWTSSEFGFATLDDAY
                     ATGSSIMPQKKNPDVGELARAKAARLTANLVHLLGVTKGLPLAYDRDLQEDKEAVFDT
                     VDTLSAALPALTGLVGTMTFHPDRLAASVGSASAATDLAEWLVGAGVPFREAHHAVGS
                     LVGRLTAEGRELSAATAQDLAQAHPAFRPEALQRLDPRRCAEARRSHGGTAPERIADQ
                     LSALRAILAEQEERLSALA"
     gene            2676..>3217
                     /locus_tag="VKX24_09825"
     CDS             2676..>3217
                     /locus_tag="VKX24_09825"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014443407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HLJ08827.1"
                     /translation="MPRVILLAAAGAGGPSQLLPAREQMAFTLGFHIILVPFGVAFTT
                     IMMIAEYRAYRRNDADALLLAQRWSKVAAVLFAVGAVSGTVLSFEMGLLWPGLMGRFG
                     AAYGIPFVVEGIFFFLEAIYLAIYIYGWKRMKRWTHFAFGIPVVISGMGGTFSVVAAN
                     AWMNLPGGITLSRKGTVVDV"
BASE COUNT          438 a         1169 c         1135 g          475 t
ORIGIN      
        1 atctgcaagc acctggtcgg ccaggcacgc cgcttcggcg ccgactccgt cgcccacggc
       61 tgcaccggaa agggcaacga ccaggtccgg ttcgaggtct cgctcggggc actggcgccg
      121 gacctgaccg tcctcgcccc cgtacgggag tgggggatga accgggagca gacccaggcc
      181 tacgggctgg cccgcgggct gccggtgcgg gcgggggcgg ccgctcccta ctcgatcgac
      241 gagaacctgt ggggacgggc gatcgagtgc ggggcgctcg aggacccgat gaccgaagct
      301 cccgaggacg tctgggagcg caccgtgtcg ccggccaagg ccccctccga gccggcctac
      361 gtcgagatcg ccttccagaa cgggataccg gtgggcctcg acggcgagtc gctgcgcccg
      421 gcgacggtga tccggcggct cgacgcgctg gccggcagtt acggcgtcgg ccggctggac
      481 atggtcgagg accgggtggt cggcatcaag tcccgggagg tctacgaggt gcccgctgcg
      541 tcggtgctga tcgccgccca cagcgacctc gaggagctga ccctggagcg ggaagtcctg
      601 cgggccaagc ggcacctgga ggtccgctac ggcgagctgg tctacgaggg gcagtggttc
      661 tctccgctgc gcgacgccct cgacgccttc aacgcctcga cccagcgcta cgtcaacggc
      721 aaggtgcggg tcaagctcga ggctggctcc gcccgggtgg tcggccggtc gtcggcgggt
      781 tcgctgtacg acctgtcgct ggccacctac gacaccggcg acgccttcga gcacaccgcc
      841 gcccagggct tcgtcaagct gtgggggttg ccgaccaaga cctgggcgcg ggcgcatgtg
      901 gccgacgccg gggccgcccc cgccggagac actggggggg ccgcgcccgc aggggaggcc
      961 gcgcccgccg agccgggagc atgaccgccg acaaaccgct ctgggccggc cgcttcgccc
     1021 gcccgcctgc cgaggcgctc cgggcgttca cggtatcgct gccctacgac cagcggctgt
     1081 ggcgggagga cctggcgtcg acggcggcgc acgcccggac actcgagcgg gccggcatcc
     1141 tcacccccga ggagcgggtg atgatcgagt cggtgtgcga cgaggcggca accgagttcg
     1201 agtccggtac cttcgccttc gacccgaccg acgaggacat ccactcggcg gtcgagcgct
     1261 tcctcaccgg ccgcctcggc gacatcggcg cgaagatcca cgccggacgg tcgcgcaacg
     1321 acctggttgc ctcggacctc cggctgtggg ccaagggtgc gtcgctggcc gttgccgggg
     1381 gggtcaccgg attggaatcg acgctgctgg cgcaagccga ggcgcacgcc ggcacgctgg
     1441 caccgggcta cacgcacctg cagcgggcgc agccgatcct gctggcccac cacctcctgg
     1501 cccacgcctt tgccctctcc cgggacttcg cccgcctgat ccgggcctac cgggccgccg
     1561 acgtctcggt cctcggggcg gccgccttcg ccgggacgtc gcttccgctg gacccgctcg
     1621 agacggcggc cgacctcggg ttcgccgccg ccttcgacaa cgccgccgac gccgtctccg
     1681 accgggactt cgtcctggaa ctcttggccg ccggggcgat cctcggcgtc cacctctccc
     1741 ggctcggcga ggagatcgtg ctgtggacct cgagcgagtt cggattcgcc accctggacg
     1801 atgcctacgc caccgggtcg agcatcatgc cgcagaagaa gaacccggac gtcggcgagc
     1861 tggcacgtgc caaggccgcc cggctgaccg ccaacctggt gcacctgctc ggcgtcacca
     1921 agggcctgcc gctcgcctac gaccgcgacc tgcaggagga caaggaggcg gtcttcgaca
     1981 ccgtcgacac cctgtccgcc gccctgccgg cgctgaccgg gctggtcggg acgatgacct
     2041 tccaccccga caggctggcg gcgtcggtcg gctcggccag cgccgcgacg gacctggccg
     2101 agtggctggt cggggccggc gtgccgttcc gcgaggctca ccacgcggtg ggctcgctgg
     2161 tcggccggct gaccgccgag ggccgggagc tgtccgcagc gaccgcccag gacctggcgc
     2221 aggcccaccc ggcgttccgc ccggaggcgc tgcagcgact cgatccccgg cgctgcgccg
     2281 aggcgcgccg ctctcacggc gggaccgccc cggagcgcat cgccgaccag ctgtcggcac
     2341 tccgggcgat cctcgccgag caggaggagc gcctgagcgc gttggcctaa gatcccattt
     2401 gacgcggtta ggtgccgcgg cagacggagt agcggctact ggtcctgagg ggccgcgtcg
     2461 acccgacggc gtgcccgaac gacccgccga gagttctctg cgtgaacagc cgcgagagtg
     2521 acgcttcccc acacacagaa actcgcccag ggtcctagcg aagcctgagc gttcacctcg
     2581 ttaagccccg gccggggaac cggcgccggg tttcaggccg atttcgctcc tatcgccgag
     2641 ttgttaactc tcggcgacgt ggcgcccgcg cgatgatgcc gagggtgatc ctgctcgccg
     2701 ccgctggtgc cggcggcccc tcgcaactgc tcccggcccg ggagcagatg gcgttcaccc
     2761 tcggcttcca catcatcctc gtgccgttcg gcgtggcgtt tacgacgatc atgatgatcg
     2821 ccgagtaccg ggcctaccgg cgcaacgacg ccgacgccct cctgctcgcc caacgctggt
     2881 cgaaggtcgc cgccgtgctc tttgccgtcg gggcggtgtc gggcaccgtg ctgtcgttcg
     2941 agatggggct gctctggccg gggttgatgg gaaggttcgg cgcggcgtac gggatcccgt
     3001 tcgtcgtcga gggcatcttc ttcttcctcg aggccatcta cctggcgatc tacatctacg
     3061 gctggaagcg catgaagcgc tggacgcact tcgccttcgg catcccggtc gtgatctccg
     3121 gcatgggcgg caccttctcg gtcgtcgccg ccaatgcctg gatgaacctg ccggggggca
     3181 tcaccctgtc tcgcaaaggc accgtcgtcg acgtgca
//
LOCUS       DATGJT010000570         2838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1115125, whole genome shotgun sequence.
ACCESSION   DATGJT010000570 DATGJT010000000
VERSION     DATGJT010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1115125"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1062)
                     /locus_tag="VKX24_09830"
     CDS             complement(28..1062)
                     /locus_tag="VKX24_09830"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08828.1"
                     /translation="MGRTALVTGASGFMAHHLIPVLLEDGWEVRATARRPRPDWLPAE
                     VSYRPVDLAGDEPLDELCAAGTDAVFHLAGATSSLSSTEEMHRSNVVGTSRIAAAARE
                     AGTGRFVHVGSTSIYGEEVPLPQPVVETVEPHPSRGYGKAKWGAEEALWAEVARGLPA
                     VVLRPVSMFGPGAFKLLASAVLDIAIEQSAGESTFPVETNPVELRLVHVADVVGAAVH
                     LASAPDAAGRAYNVVAPWYPSALELAAILTQQFGIPLEACGGSPRCGLALDQRRATWE
                     SMVAAGMQPAILFTEERLRFLKKENRNNRLSVEALLGSGYQFAYGDEPDLVTGIADTI
                     AWYRDRRWIL"
     gene            1269..>2838
                     /locus_tag="VKX24_09835"
     CDS             1269..>2838
                     /locus_tag="VKX24_09835"
                     /inference="COORDINATES: protein motif:HMM:NF019605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ08829.1"
                     /translation="MIREGLAGKRLLMTGATGFLGTAFLQRLIVDIPIERVDLLIRRD
                     APARLRTILSSSAFKPTVEQMGMEALRELAASKVRPLSADLTQGPIPVADDIDLIIHT
                     AATVSFDPPVDEAFQTNLLGTLRLYEAGGGKPFLHVSTAYVAGLTRGTQPEELLSRRV
                     RWRAEAESAARARAEIEADARRPELLARFEAKARKEVGRAGPQSIAKRSEQHRRNWER
                     DRLIEYGRARARSLGWPDVYTFTKALTEMALDETAGDNPLTIVRPSIIESALARPLPG
                     WIEGFRMAEPVILAFGRGSLPEFPGIPEGVLDVIPVDLVVNAMLAVAALPPQRRAVHH
                     VSSGFRNPLKYRDLYDFCRTYFDEHPLPERGRGHYKVPVWTFPGRLAVQRRMDTAEKV
                     ISTAEKAVSRLPHGAMARKAARRVDDLRGRLDFAKRYADLYGPYVEAEVIYTDDRTRA
                     LYESLPPEDQAAFGFDPACYTWQHYFHDTHLPQITRSLRRVSAARIAPVVKLAPPAED
                     QIIIAIYDIDRVIVD"
BASE COUNT          424 a         1046 c          999 g          369 t
ORIGIN      
        1 agatcaccgc gtccagggcc atcggcgcta gaggatccac cggcggtcgc ggtaccaggc
       61 gatcgtgtcg gcgatcccgg tgaccaggtc gggttcgtcg ccgtaggcga actggtagcc
      121 gctgccgagg agggcctcga cgctcagccg gttgttgcgg ttctccttct tcaggaagcg
      181 gagccgctcc tcggtgaaca ggatcgccgg ttgcatcccg gcggcgacca tcgactccca
      241 ggtcgcccgc cgctggtcga gcgccagacc gcagcgggga gaccccccgc acgcctccag
      301 cgggatcccg aactgctggg tcaggatggc ggccagctcg agggccgacg ggtaccaggg
      361 ggcaacgacg ttgtaggccc tgccggcggc gtcgggggcc gaggccaggt ggacggcggc
      421 accgacgacg tcggcgacgt ggacgaggcg aagctcgacc gggttggttt cgaccgggaa
      481 agtggactcg ccggctgact gctcgatggc gatgtcgagc acggcgctgg caagcagctt
      541 gaaggcgccc gggccgaaca tcgacacggg ccgcagcacc accgccggga gcccccgggc
      601 cacctccgcc cagagcgcct cctcggcgcc ccacttggcc ttgccgtagc cgcggctcgg
      661 gtgcggctcg acggtctcga cgaccggctg cgggagcggg acctcctcgc cgtagatcga
      721 ggtcgacccg acgtgcacga agcgtcccgt gcccgcctcc cgggccgcag cggcgatccg
      781 ggacgtcccg acgacgttgg agcggtgcat ctcctcggtc gacgacagcg agctggttgc
      841 cccggcgagg tggaagacgg cgtcggtacc cgccgcacac agctcgtcga gcggttcgtc
      901 gccggccagg tcgacgggcc tgtagctgac ctcggcgggg agccagtccg gccgcgggcg
      961 ccgggccgtg gcgcgcacct cccacccgtc ctcaaggagg accgggatga ggtggtgggc
     1021 catgaagccg gaggcgcccg tgaccagggc ggtgcgtccc atgagccagg catcctactg
     1081 cgggctcgcc gcccgatggt tgcgggccga ccgccgcggg cgataatcta ccgcccggta
     1141 gacaacaggg gaccgccgag ccgcgacgcc agccgagccc cctgcgccgg aagtgccgga
     1201 acgaccggaa gtccaacgcg acaaaccctt gcccccgcgc gccgtgggcc agggaggggg
     1261 agtgcatcgt gatccgggaa ggcttggcgg gcaagcggct gctgatgacc ggggccaccg
     1321 ggttcctcgg caccgccttc ctccagcggc tgatcgtcga catcccgatc gagcgggtcg
     1381 acctactgat ccggcgcgac gccccggccc ggctgcgcac gatcctgtcc agctcggcgt
     1441 tcaagccgac cgtcgagcag atgggcatgg aagcgctccg cgaactggcg gcgtccaagg
     1501 tgcggccgct gtcggccgac ctgacccaag gcccgatccc ggtggccgac gacatcgacc
     1561 tgatcatcca caccgccgca acggtctcgt tcgacccgcc ggtcgacgag gccttccaga
     1621 ccaacctgct cggcaccttg cggctctacg aggcgggcgg gggcaagccg ttcctccacg
     1681 tctcgaccgc ctacgtcgcc gggctcaccc ggggaaccca gcccgaagaa ctcctgtccc
     1741 gccgggtccg ctggcgggcc gaggcagagt ccgccgcccg ggcgagggcc gagatcgagg
     1801 ccgacgcccg ccgcccggag ttgctcgccc ggttcgaggc caaggcccgc aaggaggtcg
     1861 gccgggcggg cccccagtcg atcgccaagc gctccgagca gcaccgcagg aactgggagc
     1921 gggaccggct gatcgagtac ggccgggccc gggcgcgcag cctcggctgg ccggacgtct
     1981 acaccttcac caaggcgctc accgagatgg cactcgacga gaccgccggc gacaacccgc
     2041 tgacgatcgt ccggccctcg atcatcgaga gcgccctcgc ccgcccgctg cccggctgga
     2101 tcgagggctt ccgcatggcc gagccggtga tcctcgcctt cggccggggg tcgctcccgg
     2161 agttcccggg catcccggaa ggggtgctcg acgtgatccc ggtcgaccta gtggtcaacg
     2221 ccatgctggc cgtcgccgcc ctgcccccgc agcgccgggc ggtccaccac gtgtcgagcg
     2281 ggttccgcaa cccgctcaag taccgggacc tctacgactt ctgccggacc tacttcgacg
     2341 agcacccgct gccggagcgg gggcgcggcc actacaaggt gccggtctgg accttcccgg
     2401 ggcggctggc ggtgcagcgc cgcatggaca ccgccgagaa ggtgatctcg accgccgaga
     2461 aggcggtcag ccggctgccc cacggggcga tggcgcgcaa ggccgcccgg cgggtcgacg
     2521 acctgcgtgg ccggctcgac ttcgccaagc gctacgccga cctgtacggc ccgtacgtcg
     2581 aggccgaggt gatctacacc gacgaccgca cccgggcgct gtacgagtcg ctgcctccgg
     2641 aggaccaggc ggccttcggc ttcgacccgg cctgctacac ctggcagcac tacttccacg
     2701 acacccacct gccccagatc acccggtcgc tgcgccgggt ctcggcagcg cggatcgccc
     2761 cggtcgtcaa gctggccccg ccggccgagg accagatcat catcgccatc tacgacatcg
     2821 accgggtgat cgtcgact
//
LOCUS       DATGJT010000571         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_804154, whole genome shotgun sequence.
ACCESSION   DATGJT010000571 DATGJT010000000
VERSION     DATGJT010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804154"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VKX24_09840"
     CDS             <1..1035
                     /locus_tag="VKX24_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08830.1"
                     /translation="FPVGRVELGEEPDGQNVLPEDYGALFVQWARALHGLDPGLALGG
                     PALQTAFADVPVWADASGETSWLRRFSRYLAHRGASGELAFLSVEWFPFDDACPPFWP
                     KLAEEPGLLRDSFRRWARDGFGSVPTLVTEYDYSAFETEAEVDLPGALLDADFVAQFL
                     ALGGTAAYLDGYEPSTPVYNPECDTWGDNMMLEADGAGDVRYRLPTYWATRLMTQIWA
                     EPGNQPQRLYETAVRTAGATPTPVSAYALHRPDGRWAVLVLNKDPRRSFDLDVRFSVA
                     GVSHPATGFAGTVELHQYGPAEYHWSADGAHGRPDRSLPPTVSRLPAGRPFTAPASSL
                     SVLVGSGPPG"
     gene            1044..1496
                     /locus_tag="VKX24_09845"
     CDS             1044..1496
                     /locus_tag="VKX24_09845"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011056942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ08831.1"
                     /translation="MRLRDATAEDLPVVAELIRALAAYERLGHEIEWTDEELGATMFG
                     PGAVPRVVLAEPTDPPGPAVGLAIWFPTYSTFLGRPGIWLEDLFVRPERRGTGVGSAL
                     LHHVFELAGEGRVEWAVLDWNEPSMAFYERLGARPVPGWTRCRWRAVS"
     gene            1592..>2174
                     /locus_tag="VKX24_09850"
     CDS             1592..>2174
                     /locus_tag="VKX24_09850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08832.1"
                     /translation="MATVPGGVTEFGGPAVGGAKERFCDAVVTAADGSTIDATATLGG
                     FTRVDDGADVHVRYREGRAVPDTLPERAAEAGLMLFLIGAAAVSLLGAGATLAGRAGQ
                     VVLAMAAVPVAAVPVFVVSLVATVVAGAPAVGGGRVAAPDIYARVEAEPGRSLTAQGV
                     RFDLVDNQPMSAAGCFGAPGSLAGALAQWKVSGS"
BASE COUNT          250 a          819 c          794 g          311 t
ORIGIN      
        1 ttcccggtcg ggcgggtcga actcggcgag gaacccgacg gccagaacgt cctcccggag
       61 gactacggcg cgctcttcgt gcagtgggcc cgcgccctcc acggcctcga ccccggcctg
      121 gccctcggcg ggccggcgct ccagaccgcc ttcgccgacg tcccggtctg ggccgacgcc
      181 tcgggggaga cctcctggct gcgccgcttc tcccggtatc tcgcccaccg gggggcgagc
      241 ggcgaactgg ccttcctgtc cgtcgagtgg tttcccttcg acgatgcctg cccgcccttc
      301 tggccgaagc tggccgaaga accgggcctg ctccgggaca gtttccgacg ctgggcccgc
      361 gacgggttcg gctccgtgcc cacgctcgtg acggagtacg actactccgc cttcgaaacc
      421 gaggcggagg tcgacctgcc cggtgccctg ctcgacgccg acttcgtcgc ccagttcctg
      481 gcgctgggcg gtacggccgc ctacctcgac ggctacgagc cgtccacccc ggtctacaac
      541 cccgagtgcg acacctgggg cgacaacatg atgctcgaag ccgacggcgc cggcgacgtc
      601 cggtaccggc tccccaccta ctgggcgacg cgcctcatga cgcagatctg ggccgagccc
      661 gggaaccaac cgcagcggct ctacgagacc gcggtccgca cggccggggc gacgccgacg
      721 ccggtcagcg cctacgccct ccaccgcccc gatggccggt gggccgtcct ggtcctgaac
      781 aaggaccccc ggcgctcgtt cgacctcgac gtccgcttct ccgtcgccgg ggtcagccac
      841 cccgccaccg gcttcgccgg gaccgtcgaa ctgcaccagt acggaccggc cgaataccac
      901 tggagcgccg acggggccca cgggcgcccc gaccggagcc tcccgccgac cgtgagccgg
      961 cttcccgcgg gacggccctt cacggccccg gcctcttcgc tgtcggtcct cgtcggctcc
     1021 ggtccgcccg gctgaccggg accatgcggc tccgcgacgc cacggccgag gacctgccgg
     1081 tggtcgccga gctcatccgg gcgctggcgg cctacgaacg gctgggtcac gagatcgagt
     1141 ggaccgacga ggagctcggg gcgacgatgt tcgggccggg ggcggtcccg agagtggtgc
     1201 tggcggagcc gaccgatcct ccgggcccgg cggtggggct cgccatctgg ttcccgacgt
     1261 actcgacgtt cctcgggcgg cccggcatct ggctggagga cctcttcgtc cgcccggagc
     1321 ggcgcggcac cggtgtgggc agcgcgctgc tccaccacgt cttcgagctg gcgggcgaag
     1381 ggcgcgtcga atgggcggtg ctggactgga acgaaccgtc gatggcgttc tacgagcgcc
     1441 tcggcgcccg cccggtcccc gggtggaccc gctgccgttg gagggccgtg tcgtagcgcc
     1501 agaaccaacg gggatccctg ccggcccggg cgcgggcggt tccggccgtg gttccggagc
     1561 atccccgccc gggatgtgcc atcgtggccc ggtggcgacg gttccgggcg gggtcacgga
     1621 gttcgggggg ccggccgtgg ggggcgccaa ggagcgcttc tgcgatgccg tcgtgacggc
     1681 tgcggacgga tcgacgatcg atgccacggc cacgctgggc gggttcacgc gggtggacga
     1741 cggcgccgac gtccacgtcc ggtaccggga ggggcgggcg gttcccgaca cgctcccgga
     1801 acgggccgcc gaggccggcc tgatgctgtt cctcatcggc gcagccgccg tgagccttct
     1861 cggtgccggg gccacgctgg ccggccgtgc cggacaggtc gtcctggcca tggccgccgt
     1921 ccccgtcgcc gcggtgccgg tgttcgtggt ctcgctcgtc gccaccgtgg tcgccggggc
     1981 cccggccgtg ggcggcggac gggtggcggc tcccgacatc tacgcccggg tggaggccga
     2041 gccgggccgc tccctcaccg cccagggcgt gcgcttcgac ctcgtcgaca accagccgat
     2101 gagcgcggcg gggtgcttcg gagctccggg ctccctggcc ggcgcgctgg cccaatggaa
     2161 ggtctccggt tccg
//
LOCUS       DATGJT010000572         2081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1524842, whole genome shotgun sequence.
ACCESSION   DATGJT010000572 DATGJT010000000
VERSION     DATGJT010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524842"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..909
                     /locus_tag="VKX24_09855"
     CDS             <1..909
                     /locus_tag="VKX24_09855"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ08833.1"
                     /translation="NLFFPLSVGGSAALFPEHPTPEVLFEQIARHRPTILINTPKMVA
                     AMVDAARSGGGAPPDLSCLRFATSAGEALPPSLYDRWKETFGVELYDGLGTAEMWHVF
                     VSNQPGAVRPGSLGRAVPGFEVTVRDADGRHVPDGEVGRLWVRGDSLALGYWQDAPQS
                     REAFRGEWYASGDLVRRDGDGFVHYVGRGDDALKVGGKWLLPAEVEDCLLAHDAVTEA
                     AVVGVPDASGLTRPVAFVVPAAGAAGAAGAGPAPGLDAELRQHCLDRLDAYKHPRRVF
                     VVDDLPRTHLGKVDRGALRRRAAGQV"
     gene            complement(980..>2081)
                     /locus_tag="VKX24_09860"
     CDS             complement(980..>2081)
                     /locus_tag="VKX24_09860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08834.1"
                     /translation="TGNDDAAFLAAALVTLPHRLRVRPGADPDVLVRQAVAEALAAPP
                     EAVARPPGPDDEEDTDRGDAEGGDERLKLLVPMESGGHRPATAEDEEVRRRSLFGDDE
                     AARFLDDLLEPGPPFPPTAGPAATRPGRRAVGEEILAVRPFRPGDRARDFSARQTVRA
                     SVRLGSLAPRALSRQPGAMWDVVVALDASASMGAGERPLVAPATAALTRVLVRQGHRV
                     GALAFSEESVLARPLSRARVPFPAGEYAFAHATNVEAGIEAARLLLLREAAAGARRHV
                     IVVTDAECTSHNGTAEAWGPLGAPRGSEGLGRLLRGGMVDAARRAALIAASRCRRQGI
                     TVSVAYPDVRAEVAFAHQLAEAGGGRARCLRP"
BASE COUNT          226 a          810 c          807 g          238 t
ORIGIN      
        1 aacctcttct tcccgctgtc ggtcgggggg tcggcggcgc tgttccccga gcaccccacg
       61 cccgaggtgc tgttcgagca gatcgcccgg caccggccga cgatcctgat caataccccg
      121 aagatggtgg cggcgatggt cgacgccgcc cgctcgggtg gcggggcgcc ccccgatctc
      181 tcctgcctgc ggttcgccac ctcggccggc gaggcgctgc cgccgtcgct ctacgaccgg
      241 tggaaggaga ccttcggggt cgagctctac gacggcctgg gaacggcaga gatgtggcac
      301 gtcttcgtct ccaaccagcc cggcgccgtc cggcccggca gcctcggacg cgccgtgccg
      361 ggcttcgagg tgacggtgcg ggacgccgac gggcgccacg tccccgacgg cgaggtgggc
      421 cggctgtggg tgcggggcga ctccctggcc ctcggctact ggcaggacgc cccgcagagc
      481 cgcgaggcct tccggggcga gtggtacgcc agcggcgacc tcgtgcgaag ggacggcgac
      541 gggttcgtcc actacgtcgg ccggggcgac gacgccctca aggtcggcgg caagtggctg
      601 ctcccggcgg aggtcgagga ctgcctgctg gcccacgacg ccgtgaccga ggccgccgtc
      661 gtcggcgtcc ccgacgccag tgggctgacc cggccggtgg ctttcgtcgt gccggccgcc
      721 ggggccgccg gtgccgccgg cgccggcccg gccccggggc tcgacgccga gctgcgccag
      781 cactgcctcg accgcctcga cgcctacaag cacccccgcc gggtgttcgt cgtcgacgac
      841 ctcccccgca cccacctcgg caaggtcgac cggggcgctc tccgccgccg ggccgccggc
      901 caggtctgag gtcgccgccg gaacgcgttt ccatcgaaac gcgttccggc cgttcgggcg
      961 cggcgttccg cccttcgggc tacggccgca ggcagcgggc ccggccgccg ccggcctcgg
     1021 ccagctggtg ggcgaaggcc acctcggcgc ggacgtcggg gtaggcgacc gacaccgtga
     1081 tcccctggcg gcggcagcgg ctggcggcga tgagggcggc ccggcgggcg gcgtcgacca
     1141 tgccgccccg cagcagccgg ccgagcccct cggagccccg gggggcgccg agcggccccc
     1201 aggcctcggc ggttccgttg tggctggtgc actcggcgtc ggtcaccacg atgacgtggc
     1261 gccgggcgcc ggcggccgcc tcccggagca gcagcagccg ggcggcctcg atgccggcct
     1321 cgacgttggt ggcgtgggcg aaggcgtact ccccggccgg gaacggcacc cgggcccggg
     1381 acagcggtcg ggccaggacc gactcctcgg agaaggccag cgccccgacc cggtggccct
     1441 gccggacgag gacccgggtg agggcggcgg tggccggcgc cactagcggc cgctcccccg
     1501 cccccatgga ggccgaggcg tcgagcgcca cgacgacgtc ccacatcgcc cccggctggc
     1561 ggctgagcgc ccggggcgcc agcgagccga gccggacgct ggcccggacg gtctggcggg
     1621 ccgagaagtc gcgggcccgg tcgccgggcc ggaagggccg gaccgccagg atctcctccc
     1681 ccaccgcccg ccgccccgga cgggtggcgg ccggtccggc ggtgggcggg aagggcgggc
     1741 ccggctccag gaggtcgtcg aggaaccggg cggcctcgtc gtcgccgaac agcgaccgcc
     1801 gccggacctc ctcgtcctcc gcggtggccg gccggtggcc gccggactcc atcggcacga
     1861 ggagtttcag ccgctcgtcg ccgccctcgg catcgccgcg gtcggtgtcc tcctcgtcgt
     1921 ccggccccgg cggacgggcg accgcctcgg gcggcgccgc cagcgcctcg gccaccgcct
     1981 gccggacgag gacgtcgggg tcggccccgg gccgcacccg gagccggtgc gggagcgtca
     2041 cgagggccgc ggccaggaag gcggcgtcat cgttccccgt c
//
LOCUS       DATGJT010000573         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1215466, whole genome shotgun sequence.
ACCESSION   DATGJT010000573 DATGJT010000000
VERSION     DATGJT010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215466"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VKX24_09865"
     CDS             <1..292
                     /locus_tag="VKX24_09865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="short chain dehydrogenase"
                     /protein_id="HLJ08835.1"
                     /translation="APSGVGVTAVCPGVIDTPIVAATRYLGARGDVRTRRRIEAVFRR
                     GHPPEAVARAVVAVADSNPAVVPVGWEARLGWHLARLTPVAVQDRLSRLDRL"
     gene            361..1332
                     /locus_tag="VKX24_09870"
     CDS             361..1332
                     /locus_tag="VKX24_09870"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLJ08836.1"
                     /translation="MAAVVAVAGAGAAAAAIATGRRWRRAEDPSAGRVLDLEGARAFK
                     VDRPDGAVLDGVVAGPPDGPLVVLSHCWTGTRATWEPVAARLVELGCRVVLYDQRGHG
                     TSTGGTAPPTVDGLGEDLAAVLEAVDARHAVLVGHSMGGMTVLALAVNRPDVVAARVG
                     ALVLAGTAGFGVAAGPLAAPVRFLSGNRGVDRLMAGRLGPPLSRGAVGRHPRQAHVVA
                     TRDAWLSLPPGVRRQFLVALQAMDFRAGLGKIGVPTTVVVGSRDLLTPPRLGRGIAAV
                     VPGARLVEVPGAGHMLPYEEPDLLAEIIGAAAAAVPATAGAAAGGAT"
     gene            1329..2261
                     /locus_tag="VKX24_09875"
     CDS             1329..2261
                     /locus_tag="VKX24_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013132559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diiron oxygenase"
                     /protein_id="HLJ08837.1"
                     /translation="MTTAEEFAVTVGRLSRLSAERHFDAYADIDWDDPALALDPADPR
                     FDLPAIDPLRHNDWYAAQPPEVRAGVACYRWAACMKTGWHFENLLQRGLLRRAFELGD
                     GDGAAEFRYLHHEIIEESQHTLMFQEFVNRSGLPVRGMPWFLRRLAEWFVVPLARVFP
                     ALFFLFVLGGEDPVDHLQRRVLSDGDTTLHPLVERIMRIHTVEEARHLSFARRYLQRT
                     VPGLGRLRRLQLALLAPVVLGVMARLMLQPPGDLVRRFGIPGDVVRAANGSDAGRRLL
                     RDSVGKTRRLFRELGLITPASRMLWKAAGLWDTP"
     gene            2312..>2573
                     /locus_tag="VKX24_09880"
     CDS             2312..>2573
                     /locus_tag="VKX24_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009239706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HLJ08838.1"
                     /translation="MAARLKQAGIEDFVVLERAGEVGGTWRDNTYPGAACDVPSHLYS
                     FSFAPNPDWSRSFSPQAEIQAYLERVAGDFGVRPHVRFHHEVI"
BASE COUNT          273 a         1021 c          918 g          361 t
ORIGIN      
        1 ggcgccctcc ggcgtcgggg tgaccgccgt ctgccccggc gtcatcgaca ctcccatcgt
       61 ggccgccacc cgctacctcg gcgcccgggg cgacgtccgc acccggcgcc ggatcgaggc
      121 ggtcttccgc cggggccacc cgcccgaggc cgtcgcccgg gccgtcgtag ccgtcgccga
      181 ttccaacccg gcggtggtgc cggtcggctg ggaggcccgc ctcggctggc atctcgcccg
      241 cctcacgccc gtcgcggtcc aggaccgcct gtcccggctg gaccggctgt gaacctcatg
      301 ctgaacccga gcgtgacatc cagggaacgc cgccgggccc gcgccggcat cgtggttccg
      361 gtggctgcgg tcgttgcggt ggccggtgcc ggggcggcgg cggccgccat cgccaccgga
      421 cgccggtggc gcagagccga agacccgagc gcgggccgcg tcctcgacct cgagggcgcc
      481 cgggcgttca aggtcgaccg cccggacggc gcggtcctcg acggcgtcgt cgccggtcct
      541 cccgacggcc cgctggtcgt cctgtcgcac tgctggaccg ggacgcgggc cacctgggag
      601 cccgtcgccg cccggctcgt ggagctgggc tgccgggtgg tgctctacga ccagcggggc
      661 cacggcacct cgaccggggg gacggcgccg ccgaccgtgg acgggctggg agaggacctc
      721 gccgccgtcc tcgaggcggt cgacgcccgc cacgccgtcc tcgtcggcca ctccatgggc
      781 ggcatgaccg tcctcgccct ggccgtcaac cggccggacg tcgtggccgc ccgcgtcggc
      841 gccctcgtgc tggccggcac ggccggcttc ggggtggccg ccggcccgct ggcggcgccc
      901 gtccgcttcc tcagcgggaa ccggggggtc gaccggctga tggccggccg gctgggcccg
      961 ccgctgtccc ggggggcggt cggccgccat ccccgccagg cccacgtcgt cgccacccgc
     1021 gacgcctggc tgtcactgcc gcccggcgtc cgccggcagt tcctcgtggc gctgcaggcg
     1081 atggatttcc gggccggact cgggaagatc ggcgtcccca ccaccgtggt ggtcggcagc
     1141 cgcgacctcc tcacgccgcc ccggctcggg cgggggatcg ccgccgtcgt gcccggcgcc
     1201 cgcctggtgg aggtgcccgg cgcggggcac atgctcccct acgaggaacc cgatctgctg
     1261 gccgagatca tcggcgccgc cgccgccgcc gtccccgcca ccgccggtgc cgccgccgga
     1321 ggtgcgacgt gaccacggcc gaggaattcg ccgtcacggt cgggcggctc agccggctgt
     1381 cggccgaacg ccacttcgac gcctacgccg acatcgactg ggacgacccg gcgctggccc
     1441 tcgacccggc cgacccccgc ttcgacctgc cggccatcga cccgctccgc cataacgact
     1501 ggtacgccgc ccagccgccg gaggtgcggg ccggcgtcgc ctgctaccgc tgggcggcct
     1561 gcatgaagac cggctggcac ttcgagaacc tgctgcagcg cgggctgctg cgtcgagcat
     1621 tcgagcttgg cgacggcgac ggcgcggcgg agttccgcta cctccaccac gagatcatcg
     1681 aggaatccca gcacacgctg atgttccagg agttcgtcaa ccgctccggc ctcccggtgc
     1741 ggggcatgcc gtggttcctc cgccggctgg ccgagtggtt cgtggtcccg ctggcccggg
     1801 tgttccccgc cctgttcttc ctcttcgtgc tgggcggcga ggacccggtc gaccatctcc
     1861 agcgccgggt gctctccgac ggcgacacga cgctccatcc gcttgtggaa cggatcatga
     1921 ggatccacac cgtcgaggag gcgcgccacc tctccttcgc ccgcaggtac ctgcagcgca
     1981 ccgtgcccgg gctcggccgg ctccgccgcc tccagctggc gctcctggcg ccggtggtgc
     2041 tcggcgtgat ggcccggctg atgctgcagc cgcccggcga cctcgtgcgc cggttcggga
     2101 ttccgggcga cgtcgtgcgg gccgccaacg gcagcgacgc cggccgccgg ctgctccggg
     2161 actcggtcgg caagacccgc cggctcttcc gggaactcgg gctcatcacc ccggcctcga
     2221 ggatgctgtg gaaggccgcc gggctgtggg acaccccgtg acggtgcgga ccggcgtgct
     2281 cgtcatcggg acgggcttcg ccggcctcgg catggccgcc cgcctgaagc aggccggcat
     2341 cgaggacttc gtcgtcctcg aacgggccgg cgaggtcggc ggcacctggc gggacaacac
     2401 ctatcccggc gccgcctgtg acgtcccgtc ccacctctac tccttctcct tcgccccgaa
     2461 ccccgactgg agccggtcgt tctcgcccca ggccgagatc caggcctacc tggagcgggt
     2521 ggccggcgac ttcggcgtcc ggccccacgt ccggttccac cacgaggtca tcg
//
LOCUS       DATGJT010000574         2923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1427003, whole genome shotgun sequence.
ACCESSION   DATGJT010000574 DATGJT010000000
VERSION     DATGJT010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1427003"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..1027
                     /gene="rfbD"
                     /locus_tag="VKX24_09885"
     CDS             152..1027
                     /gene="rfbD"
                     /locus_tag="VKX24_09885"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HLJ08839.1"
                     /translation="MERHPRLVVTGGGGQLGRAFQALLAGGGGMAATFVDQDDVDLTA
                     GDAVRRTVAALEPEVIVHAGAYTAVDAAEGDKDRAWAVNVDGTRQVAKAATELGALLV
                     YVSTDYVFDGTAVTPYPEGAPTHPLSVYGATKLAGEEQAAAAPNHLIVRTSWVFGDGK
                     NFVRAILRAASAQPGRELTVVDDQRGRVTYAPDLAEGLLGLIGAGGRGLFHLQGGGEP
                     GSWADVAEVALEAAGLPSAVRRTTTAAYDEGRPGPIAPRPAYSVLDCSKAAALGVALR
                     PWRDAVAEYVKVAAI"
     gene            1024..1758
                     /locus_tag="VKX24_09890"
     CDS             1024..1758
                     /locus_tag="VKX24_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014100151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLJ08840.1"
                     /translation="MKGVVLAGGLGTRFHPVTKVVNKHLLDVFDEPMVFFPIRTLASA
                     GIKEVTLVTGEEISQFKRLLGDGSTLGVHLTYAYQEGERGIADALSRAEALVRGDPII
                     VILGDNIFQESLRSEVDAFVDQGKGARILLKQVSPEDARRFGVAEVADGKILGIEEKP
                     ESPRSDLVVTGCYLYDDRVFDIIRTLVPSGRGELEITDVNNVYIQERSMTYGVLRGWW
                     TDAGTPASKLKASIMVALEKGVTFHR"
     gene            complement(1772..2656)
                     /locus_tag="VKX24_09895"
     CDS             complement(1772..2656)
                     /locus_tag="VKX24_09895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08841.1"
                     /translation="MDMVPVPQGGPTFWSFAPEIPWGPLYQPLVQAGWADEVLSGNVA
                     GGEFAIQAHAAVQTNASTTWTVDYGDSTPAVVVTTPAKRCTYSADNPPDVVPFELLSV
                     PNHTYTEPGRYTITVTVGITGCDGTPGPATGTSFAYAWTPNGEGSLDALSEVRSLVPL
                     ATWTPTYGATDTVGTVVEAPTELNPDYQVLPIYAYCAGPTSEPAGASFTLTCTTVSAD
                     PATPVTFSCQNGPCGGTFDQNPIQLTPGTMYGVPAASGVVHVTETMPLNFLAVSFLFV
                     VTQGPHTTYAEADVITLQ"
BASE COUNT          443 a          972 c         1074 g          434 t
ORIGIN      
        1 tcaccgacgt cgacctcatc tactgggtga ccacctacta cgacgccagc gacgagttcg
       61 gtgtcgcctg ggacgacccg accctggcgg caccctggaa gctcgacgat ccggtcctct
      121 ccaaccggga ccgcaccaac ccgaggctgg agtggagcga catccccgcc tggtcgtaac
      181 cggcggcggt ggccagctcg ggcgggcgtt ccaggcgctg ctggccggcg gcggcggcat
      241 ggccgccacc ttcgtcgacc aggacgacgt cgacctgacc gccggcgacg cggtccggcg
      301 cacggttgcc gccctcgagc cggaggtgat cgtgcatgcg ggggcctaca ccgcggtcga
      361 cgccgccgag ggcgacaagg accgagcctg ggcggtcaac gtcgacggca cccggcaggt
      421 ggcgaaggca gcgaccgagc tgggggcgtt gctggtctac gtctcgaccg actacgtctt
      481 cgacggcacc gcggtcaccc cctacccgga gggcgccccc acccacccgc tgtcggtcta
      541 cggggccacg aagctcgccg gggaggagca ggcggcggcg gcgcccaacc atctgatcgt
      601 ccgcacctcc tgggtgttcg gcgacgggaa gaacttcgtc cgggcgatcc tgcgggcggc
      661 cagcgcccag ccgggccggg agctgaccgt cgtcgacgac cagcggggcc gggtgaccta
      721 cgccccggac ctggccgagg ggctgctcgg cctgatcggc gccgggggcc gggggctgtt
      781 ccacctccag gggggcggtg agccagggag ctgggccgac gtcgccgagg tcgccctgga
      841 ggcggccggc ctgccgtcgg cggtgcgccg gacgaccacc gccgcctacg acgaaggccg
      901 ccccgggccg atcgctcccc gcccggccta cagcgtgctg gactgctcca aggccgctgc
      961 cctcggtgtg gcgctgcggc cgtggcgcga cgccgtcgcc gagtatgtca aggtggcggc
     1021 gatatgaaag gcgtcgtgct cgccgggggc ctgggcacac ggttccaccc ggtgacgaaa
     1081 gtcgtcaaca agcacctgct cgatgtgttc gacgagccga tggtcttctt ccccatccgc
     1141 accctggcct ccgccggcat caaggaggtc accctggtca ccggggagga gatctcccag
     1201 ttcaagcggc tgctgggcga tggctcgacg ctcggcgtcc acctgaccta cgcctaccag
     1261 gagggggagc ggggcatcgc cgacgccctc agccgggcgg aggccctggt gcgcggcgac
     1321 ccgatcatcg tgatcctggg cgacaacatc ttccaggagt cgttgcggag cgaggtcgac
     1381 gccttcgttg accagggcaa gggggcgcgg atcctgctga agcaggtgtc gcccgaggac
     1441 gcccgccggt tcggggtcgc cgaggtcgcc gacggcaaga tcctgggcat cgaggagaag
     1501 cccgagtcgc cgcgctccga cctggtcgtc accgggtgct acctgtacga cgaccgggtc
     1561 ttcgacatca tccgcaccct cgtcccgtcg ggccggggcg agctggagat caccgacgtc
     1621 aacaacgtct acatccagga acggtcgatg acctacgggg tgctgcgcgg ctggtggacc
     1681 gacgccggca cgccggcgag caagctcaag gcgtcgatca tggtcgccct ggagaagggc
     1741 gtgaccttcc accgctgacc ggtgtccccc gctactggag cgtgatgacg tcggcctcgg
     1801 cgtaggtggt gtgcggcccc tgggtcacca cgaagaggaa cgacacggcc aggaagttga
     1861 ggggcatggt ctcggtgacg tggaccaccc cgcttgcagc cggcaccccg tacattgtcc
     1921 cgggggtcag ttggatggga ttctgatcga atgtcccgcc gcagggacca ttctggcagc
     1981 tgaaggtgac cggcgtcgcc gggtccgcgg aaaccgtggt gcaggtgagg gtgaaacttg
     2041 cccctgccgg ctccgacgtc ggcccggcgc agtaggcgta gatcggtaga acctggtagt
     2101 cggggttcaa ctcggtgggg gcctcgacca ccgtcccgac cgtgtcggtc gctccgtacg
     2161 tgggagtcca cgtggccaga ggcaccaagc ttcggacctc ggagagggca tcgaggctgc
     2221 cctcgccgtt gggcgtccaa gcataggcga atgaggtgcc agtcgctggc cccggcgtcc
     2281 cgtcgcaacc cgtgatgccg acggtcaccg tgatggtgta gcgacccggc tcggtgtagg
     2341 tgtggttcgg cacggagagc agctcgaagg gcacgacgtc cggtgggttg tctgccgagt
     2401 aggtgcaccg tttggccggc gtcgtgacca cgaccgccgg tgtgctgtcc ccatagtcga
     2461 ccgtccaggt ggtactggca ttggtctgga ccgcggcgtg ggcctgaatg gcgaactccc
     2521 cgccggcgac attgccgctg agcacctcgt ccgcccagcc cgcttgcacc agaggctggt
     2581 agagcggccc ccaggggatc tccggagcga agctccagaa cgtggggcca ccctgaggaa
     2641 ccggcaccat gtccacgatc tggagggggg ccaaaccaga ggcgggttgg atgtactgcg
     2701 gcgggtatac gccgtcggcc gcatagagtt tcccggtcgg cgccggagtc gcggacggtt
     2761 tcggggctgg cgagaatcgt tgcaccgggg gcgggaaagg cttcgggttg gccggtgaga
     2821 ggaatgcctg ctgcgaggac ggactcggag tgggtcgcgg ggatggcgga ggctcagcgg
     2881 tgccggaaac gccacccccg gcaatgctca cctgggcggc cgc
//
LOCUS       DATGJT010000575         2028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_908449, whole genome shotgun sequence.
ACCESSION   DATGJT010000575 DATGJT010000000
VERSION     DATGJT010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908449"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VKX24_09900"
     CDS             complement(<1..268)
                     /locus_tag="VKX24_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08842.1"
                     /translation="MALRRTSLAIAVTAGLAFAGVAVEATAATASNPAKTSSSTTTTM
                     KKKPMAAPTAMSTTTTMHKKAVEPTAMSTTTTMHKKAVEPTAMST"
     gene            complement(428..976)
                     /locus_tag="VKX24_09905"
     CDS             complement(428..976)
                     /locus_tag="VKX24_09905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08843.1"
                     /translation="MNDPEGPAAPVPPPTVVRIACVALLLIGFGSVLISLPSLAGPQS
                     ARCTLARARIDDANTDGKPWNNVETGGRKAKDIPCADAVGLVTRIRLDEKGTRTASVP
                     SEEAVRTQAGLTVVLGLGQGISAALLARTLRRPARNAAIAFAVFGVGLPVLGVISLAA
                     AVFVVYALLLSPAARQLWPRRS"
     gene            1056..>2028
                     /locus_tag="VKX24_09910"
     CDS             1056..>2028
                     /locus_tag="VKX24_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003921898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLJ08844.1"
                     /translation="METSAEAWQPTACILCYLNCGIEVRRGGEDGRRFERIRGDKAHP
                     ASRGYTCQKALRLDHYQNGRHRLTSPLRRRPDGGYEEIDWDTAIAEVAAGLQGVIDRH
                     GGQSILYYGAGGQGNHLGGSYGLAFYAGLGSKFRSLALAQEKGGEFFVDLELYGGHTT
                     GDYDNAEVVLLLGKNSWQSHGFQRTRTILKAIANDPGRALIVVDPVRNETAELADHHL
                     AVRPGADAFLYAAMLAVLVEEDLLDHSFLAEHTTGAEEVRSELKRVPIAEFCARAGIP
                     EQQVRTVVRRIAGAASVSTLEELGIEQIPHSTLNSYLHKLLWLLVGSF"
BASE COUNT          301 a          712 c          719 g          296 t
ORIGIN      
        1 tcgtcgacat ggccgtcggc tcgacagcct tcttgtgcat cgtggtggtc gtcgacatgg
       61 ccgtcggctc gacagccttc ttgtgcatcg tcgtggtcgt cgacatggcc gtcggcgcgg
      121 ccatcggctt cttcttcatc gtcgtcgtgg tgctgctcga cgtcttcgcc gggttcgatg
      181 cggtggcggc cgtcgcttcg acggcgacgc cggcgaaggc gaggccggcg gtcacggcaa
      241 tggcgaggga cgtccgacgg agtgccacga agagacctcc tgtgtgctgg gtacgggtcc
      301 ccctccgcct agcaaacaaa cctcaaatgc ggctcaacgc agctgaatgc ccgaccgtaa
      361 gaggccgagt gaaaggcccg gttctcacgc agcgttcagc tggccgcctc gagggtgctc
      421 ggcccgctca gctgcggcgg ggccagagct gccgggcggc ggggctcaac aggagggcgt
      481 agaccacgaa gacggcggcg gcgagggaga tcacgccgag gacgggcagg cccacgccga
      541 agacggcgaa ggcgatggcg gcgttccggg ccgggcgccg gagcgtgcgg gccagcagcg
      601 cggcgctgat gccctggccg aggcccagga cgacggtcag ccccgcctgg gtccgcacgg
      661 cctcctcgct ggggacggac gccgtgcggg tgcccttctc gtcgagcctg atccgggtga
      721 cgaggccgac ggcgtcggcg caggggatgt ccttggcctt gcggccgccg gtttcgacgt
      781 tgttccacgg cttcccgtcg gtgttggcgt cgtcgatccg ggcccgggcc agggtgcagc
      841 gggcgctttg cggtccggcc agcgacggca ggctgatcag caccgacccg aagccgatca
      901 gcagcagcgc cacgcaggcg atgcggacga cggtcggcgg cgggacgggc gccgccgggc
      961 cctcggggtc gttcatcggc gagacggtag tcggccgtcc gccccggtca ccgcggccgt
     1021 tgacatcgtg acaacgccca ttgtaacaat cccctatgga aacttcggcg gaagcgtggc
     1081 agccgacggc ctgcatcctc tgctacctca actgcggtat cgaggtccgt cgggggggtg
     1141 aggacggccg gcggttcgaa cggatccggg gcgacaaggc ccaccccgcc tccaggggct
     1201 acacctgcca gaaggccctc cgcctcgacc actaccagaa cgggcgccac cgcctcacgt
     1261 cgccgctgcg ccgccggccc gacggcggct acgaggagat cgactgggac acggccatcg
     1321 ccgaggtggc cgccggcctc caaggggtca tcgaccgcca cggcggccag tcgatcctct
     1381 actacggcgc cggcgggcaa gggaaccatc tcggcggctc ctacggcctg gcgttctacg
     1441 ccggcctcgg ttccaagttc cgctcgctgg ccctggccca ggagaagggc ggggagttct
     1501 tcgtcgacct cgagctctac ggcgggcaca ccaccggcga ctacgacaac gccgaggtcg
     1561 tgctgctgct cgggaagaac agctggcagt cgcacgggtt ccagcggacg cggaccatct
     1621 tgaaggccat cgccaacgat cccgggcggg cgctgatcgt ggtcgacccc gtccgcaacg
     1681 agaccgccga actggccgac caccacctcg ccgtccggcc cggggccgac gccttcctct
     1741 acgccgccat gctggccgtc ctcgtcgagg aggacctgct cgaccactcc ttcctggccg
     1801 agcacaccac cggggccgag gaggtgcgaa gcgagctcaa gcgggtgccg atcgccgagt
     1861 tctgcgcccg ggccgggatc cccgagcagc aggtccgcac cgtggtgcgc cggatcgcgg
     1921 gagcggcgag cgtctccacg ctggaggagc tcggcatcga gcagatcccc cactcgacgc
     1981 tcaactccta cctccacaag ctgctgtggc tcctcgtcgg cagcttcg
//
LOCUS       DATGJT010000576         2495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_182059, whole genome shotgun sequence.
ACCESSION   DATGJT010000576 DATGJT010000000
VERSION     DATGJT010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182059"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VKX24_09915"
     CDS             complement(<1..229)
                     /locus_tag="VKX24_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014213033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HLJ08845.1"
                     /translation="MDRGHGGTLAAQALRAAGVDVVFTLSGGHLFPLYDGCVAAGIRL
                     VDTRHEQTAGFAAEAWAKVTRRPGVAALTAGP"
     gene            292..1287
                     /locus_tag="VKX24_09920"
     CDS             292..1287
                     /locus_tag="VKX24_09920"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HLJ08846.1"
                     /translation="MQGRSPSDPPPGRPSAGASWWPAVRIVASAVMLGLLLPRMHLPS
                     LLPRGHGRDTIVYLVFGLLVTLGGIVLSAWRWQRVLAVFDADTRLGNLVSHYLAGQFV
                     GNFLPSTIGGDVLRVSRLSAGSEVPGSSVFASVVIERLTGWIVLPLLTMTGLVLQPSL
                     LRLGVASRLALALSFGTLLLLAAIVAAAGSSRVAGRFAANEGWTRFIGAVHLGVDSLR
                     RRPQAAAGILGVATVYQLSMVLAAWSATRALGLHLPMTALLAFTPVVAIAQVLPLSLN
                     GLGIREGAFVLFLGPLGVAAGQAVAIGLIVYALTLAVSLLGAPAFAVGGRKAVSV"
     gene            1338..2078
                     /locus_tag="VKX24_09925"
     CDS             1338..2078
                     /locus_tag="VKX24_09925"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HLJ08847.1"
                     /translation="MLTVFVLYEVYSAIRNLSEGSKSQAFHHAREIMHWQHMVGLNFE
                     ATLQSWALHFTPLIVFLNYVYGSLHFIVTAAAVIWLYRRHPGDYPRWRNTLVLTTGLA
                     LVGFVFWPLMPPRLLPAHYGFVDTLAKYPTFWSFDSGAIHNISNQYAAMPSLHFGWSL
                     FCAAALAPRLRHRAARTVAALYPLLTLAAIVLTANHYFLDAAAGAVVFSVGYLLSRRF
                     TRPGPVVTDPGDRSGPGEPASAPVLRRR"
     gene            complement(2065..>2495)
                     /locus_tag="VKX24_09930"
     CDS             complement(2065..>2495)
                     /locus_tag="VKX24_09930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08848.1"
                     /translation="SMGGHPLARPVVGLAPTADGHGYWEVASDGGVFAFGDAPFYGST
                     GAIALNQPIVGMAATPTGHGYWFVASDGGIFAFGDAPFFGSAVSDDSIPIAGMAATKN
                     GYGYRVARVDGRVVPYGNAAAGSGLAGGLRAPVVGIVTAF"
BASE COUNT          283 a          963 c          852 g          397 t
ORIGIN      
        1 cgggaccggc ggtgagagcg gcgacgccgg gccggcgggt caccttggcc caggcctcgg
       61 cggcgaagcc ggccgtctgc tcgtggcggg tgtcgaccag gcggatcccg gcggccacgc
      121 agccgtcgta gagggggaac agatgcccgc cggagagggt gaagaccaca tcgacgcccg
      181 ccgcccgcaa ggcctgcgcc gccagggttc cgccgtggcc tcggtccatt cgcgtccttc
      241 cttccccggg atccggatgc ggtccgcgtt tggccgatta ggctaaagcg gatgcagggc
      301 cgatccccat ccgacccgcc gccaggccgg ccgtcggccg gcgcctcctg gtggccggcc
      361 gtccgcatcg tggccagcgc cgtgatgctc ggcctgctcc ttccccggat gcacctgccg
      421 tcgctgctcc cccggggcca cggccgggac acgatcgtct atctggtctt cgggctgctg
      481 gtcacgctcg ggggcatcgt cctctcggcc tggcggtggc agcgggtgct ggccgtcttc
      541 gacgcggaca cccgcctcgg aaatctcgtc tcccactacc tggccgggca gttcgtcggg
      601 aacttcctgc cttcgacgat cggcggcgac gtcctgcggg tcagccggct gagcgccggc
      661 tccgaggtgc ccgggtcgtc ggtgttcgcc tctgtggtga tcgagcggct gacgggctgg
      721 atcgtgctcc cgctgctgac gatgaccggg ctcgtcctcc agccgtcgct cctccggctg
      781 ggggtggcca gccggctggc gctggcgctg tcattcggca cgctgctgct cctggcggcg
      841 atcgtggccg ccgccggcag cagccgggtg gccgggcgct tcgccgccaa cgaggggtgg
      901 acccgcttca tcggcgccgt ccacctcggg gtcgactccc tccgccgccg gccccaggcc
      961 gccgccggga tcctcggcgt cgccaccgtc taccagctgt cgatggtgct ggccgcctgg
     1021 tccgccaccc gggccctcgg cctccacctg ccgatgacgg ccctcctggc cttcaccccg
     1081 gtggtggcca tcgcccaggt cctgccgctg tcgctcaacg gcctcggcat ccgggagggc
     1141 gccttcgtgc tcttcctcgg gccgctcggc gtcgccgccg ggcaggccgt ggccatcggc
     1201 ctcatcgtct acgccctcac gctggcggtc agcctcctcg gtgcgccggc cttcgccgtc
     1261 ggcggtcgga aggcggtctc cgtctgaagc tgttccgggc ccgacccgct gtccggcgcc
     1321 tctactggtg gcgcgaagtg ctcaccgtct tcgtcctcta cgaggtctac tccgccatcc
     1381 ggaacctgag cgagggcagc aagagccagg ccttccacca cgcccgggaa atcatgcact
     1441 ggcagcacat ggtgggcctg aacttcgagg ccacgttgca gtcctgggcg ctgcatttca
     1501 cgccgctgat cgtgttcctg aactacgtct acggctcgct gcacttcatc gtcaccgccg
     1561 ccgcggtgat ctggctctac cggcggcacc ccggcgacta cccccgctgg cgcaacacgc
     1621 tggtgctgac caccgggctg gcgctcgtcg gcttcgtctt ctggccgctg atgccgcccc
     1681 ggctgctccc ggcccactac gggttcgtcg acacgctggc caagtacccg acgttctggt
     1741 ccttcgactc cggcgccatc cacaacatct ccaaccagta cgccgccatg cccagcctcc
     1801 acttcggctg gtcgctgttc tgcgccgcgg cgctggcgcc ccggctgcgg cacagggcgg
     1861 cccgcacggt ggccgccctc tacccgctgc tgacgctggc ggccatcgtg ctcaccgcca
     1921 accactactt cctcgacgcc gccgccggcg ccgtcgtgtt ctccgtcggc tacctgctga
     1981 gccggcgctt cacccggccc ggcccggtcg tcaccgaccc cggcgaccgg agcggccccg
     2041 gggaaccggc ttcggcgccg gtgctcagaa ggcggtgacg atgccgacca ccggcgcccg
     2101 gaggccgccg gccaggccgc tgccggccgc ggcgttcccg taggggacga ccctgccgtc
     2161 gacgcgcgcc acccggtagc cgtagccgtt cttggtcgcc gccatgccgg cgatcggaat
     2221 cgaatcgtcc gacaccgccg agccgaagaa cggggcgtcg ccgaaggcga agatgccgcc
     2281 gtcggaggcc acgaaccagt agccgtggcc ggtcggcgtg gccgccatgc cgacgatcgg
     2341 ctggttcagg gcgatggcgc ccgtcgaccc gtagaacggg gcgtcgccga aggcgaagac
     2401 gccgccgtcg gacgccacct cccagtagcc gtggccgtcg gcggtgggcg ccaggccgac
     2461 gacgggacgg gcgagcgggt gtccgcccat cgagc
//
LOCUS       DATGJT010000577         2158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_488163, whole genome shotgun sequence.
ACCESSION   DATGJT010000577 DATGJT010000000
VERSION     DATGJT010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488163"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VKX24_09935"
     CDS             <1..613
                     /locus_tag="VKX24_09935"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HLJ08849.1"
                     /translation="AARTASKCGDAKSVATGSEAAAASEAEGTERRGIAAPYRFRRPM
                     EENARAAAEAALTGGLPDEAALRRVCEILAGAHPGWGWVGVYVLAGDTLLLGPYVGPA
                     TEHTRIPVGVGVCGTAVARDTNVVVDDVAALENYLACSTGTRSELVVLIRDGGDVVGQ
                     FDVDSDDLAAFGPADEALLEDLAVLAGPRCRRLAAALAAEAPG"
     gene            complement(621..1361)
                     /locus_tag="VKX24_09940"
     CDS             complement(621..1361)
                     /locus_tag="VKX24_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007077074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HLJ08850.1"
                     /translation="MSRPLHDHDHDHEAAGHSDGCGGPGGPGGHEAAPVAVRLAPGER
                     EAAVARARLLNRVSLGWNAVEGIVAVAAGVAAGSVSLVGFGIDSGIEVAAALILFWRL
                     RQERRSGCMLGYDRTAVRLIALAFAALAAYVWIDAVRDLLGRARPEASVPGLVVAVAS
                     VLLMPRLARAKRALAPALGSQAVSADAQQTSLCALLSAVLIVGVGLNILLGWWWADPV
                     AALVIGALALEAGRRVWRSESLADTCCA"
     gene            complement(1358..1690)
                     /locus_tag="VKX24_09945"
     CDS             complement(1358..1690)
                     /locus_tag="VKX24_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012936446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLJ08851.1"
                     /translation="MVDPARVAETRRRLLDANEAERLAGLFRLLGDRSRVRILFALAE
                     AGELCVCDLAAAVDVAETAVSQALRLLRTAGVVRARRDGRTVWYRLDDEHVRLLLDQS
                     RSHVSHGS"
     gene            1856..>2158
                     /locus_tag="VKX24_09950"
     CDS             1856..>2158
                     /locus_tag="VKX24_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08852.1"
                     /translation="MQMISDPAPGDQGHRVTMSAMADALRFPIRFSPGNSILFRGLLI
                     PPSSAYADLDDDTVHVRLGWTFSARIPRRLVASAGPGKRPTIPLTAGAHGWNGRWLV"
BASE COUNT          279 a          862 c          775 g          242 t
ORIGIN      
        1 ggcggcgagg acggcctcga agtgcggcga tgcgaaatcg gtggcgacag gctcggaggc
       61 ggcggccgcc tccgaggcgg aggggaccga gcggcgaggc atcgccgcac cctatagatt
      121 tcgccgcccg atggaggaga acgcccgggc ggcggccgag gccgccctca ccggtggact
      181 gcccgacgag gcggcgctcc ggcgagtctg cgagatcctg gccggtgccc acccgggctg
      241 gggatgggtc ggcgtctacg tcctggccgg cgacactctg ctgctcggtc cctacgtcgg
      301 gccggccacc gagcacaccc gcatcccggt cggcgtcggg gtgtgcggca cggccgtggc
      361 ccgcgacacc aacgtcgtcg tcgacgacgt tgcggcgctg gagaactacc tcgcctgctc
      421 gacgggcacg cgctccgagc tcgtcgtcct catccgggac ggcggcgacg tcgtcggcca
      481 gttcgacgtc gacagcgacg acctcgccgc cttcggcccg gccgacgagg cactcctcga
      541 ggacctcgcc gtcctggccg gcccccgctg ccgccggctg gcggcggccc tcgccgccga
      601 ggcgcccggc tgaccctcgc tcaggcgcag cacgtgtcgg ccagcgactc cgaccgccac
      661 acccgccggc cggcctccag cgccagggcc ccgatgacca gtgccgccac cgggtcggcc
      721 caccaccacc ccaacaggat gttgagcccc accccgacga tgaggacggc ggacagcagc
      781 gcgcagaggc tggtctgctg ggcgtcggcc gacaccgcct gggacccgag cgccggggcc
      841 agcgcccgct tggcccgggc cagccggggc atgagcagca cggacgccac cgccaccacc
      901 aggcccggaa cgctggcctc ggggcgggcc cggccgagca ggtcgcggac ggcgtcgatc
      961 cagacgtagg cggccagggc ggcgaaggcc agggcgatca gccggacggc ggtgcggtcg
     1021 tagcccagca tgcagccgct gcgccgctcc tggcggagcc gccagaacag gatgagggcc
     1081 gccgccacct cgatgccgga gtcgatcccg aaccccacca ggctcacgga cccggccgcc
     1141 accccggccg cgacggcgac gatcccctcc acggcgttcc agcccaggga gacccggttg
     1201 agcagccggg cccgggccac agcggcctcg cgctcccccg gcgccagccg cacggccacc
     1261 ggcgccgctt cgtgcccgcc ggggccgccg gggccgccgc agccgtcgct gtggccggcg
     1321 gcctcgtggt catggtcgtg gtcgtggagc ggccggctca tgacccgtgg gacacgtggc
     1381 tgcgcgactg gtccagcagc agccgcacgt gctcgtcgtc gaggcggtac cagacggtgc
     1441 gcccgtcacg ccgggcccgg acgacgccgg ccgtccgcag cagccgcagc gcctgactga
     1501 cggcggtctc ggcgacgtcg acggcggccg ccaggtcgca gacgcacagc tcgccggcct
     1561 cggccagggc gaacaggatt cggacgcggc tgcggtcgcc caggagccgg aagaggccgg
     1621 ccagccgttc cgcctcgttg gcgtcgagca gcctccggcg cgtctcggcc acccgggcgg
     1681 ggtcgaccat gcggacgaca cagcgatcga gcggcgcgac gtcggccgcg gccgtagccg
     1741 gcacgacgtc cggttcgacg gccgccgccg cggcgtccgc cgccgcctgg gccggggtca
     1801 cgccgccctc ccccgccggg accggctccg ctgatacctc aacatctgca tcatcgtgca
     1861 gatgatatcc gatccggcgc ccggagacca gggccaccgt gtcaccatgt cggccatggc
     1921 cgacgccctc cggttcccca tccggttctc ccccggcaac agcatcctgt tccggggcct
     1981 cctcatcccg ccctcgtcgg cctacgccga cctcgacgac gacaccgtcc acgtccgcct
     2041 gggctggacc ttctcggccc ggatcccccg ccgcctggtg gcctccgccg ggccgggcaa
     2101 gcggccgacg atcccgctca cggccggcgc ccacggttgg aacggccggt ggctggtc
//
LOCUS       DATGJT010000578         3285 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1427664, whole genome shotgun sequence.
ACCESSION   DATGJT010000578 DATGJT010000000
VERSION     DATGJT010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3285
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1427664"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..369)
                     /locus_tag="VKX24_09955"
     CDS             complement(10..369)
                     /locus_tag="VKX24_09955"
                     /inference="COORDINATES: protein motif:HMM:NF036463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5335 family protein"
                     /protein_id="HLJ08853.1"
                     /translation="MPEQASRQPVRQEWPGFLAVIAEAEQGNPVSIEVMGQAGNEPEA
                     VAVPLAEFSYSEREDAVIVAVDGGSDGPHRHVVIHPWKIQFDPPSPFTARTIDIEGPD
                     GAHTLVTLHNRPMPSRS"
     gene            825..2093
                     /locus_tag="VKX24_09960"
     CDS             825..2093
                     /locus_tag="VKX24_09960"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLJ08854.1"
                     /translation="MRPLTAVAGASPASPAALRRDAVLAAVLGAFMLAGTFGAQRHLA
                     HAGAPPLRDLDVWGIALLVAIAACMAFRRAYPVAVLGAASGLTLVYFLANYAPGPVWL
                     GLVVTYATAVILGHRLAAGVGAFACYLAFPWLADLLGRGPAPTPLYLSTLAAGLLLLF
                     GVSEAVRMRRQRATEAARRRREEAAAAASEERLRIARDLHDVLAHNISLINVQAGVAL
                     HVNDGLPEQARSALSAIKDASREALGELRSALDALRQSGDPAPRRPSPGLGQLDDLVA
                     GARAAGLEASVEVLGEAVDLPSPVDVAAYRIVQEALTNVIRHAGASRVAISVGYTGSA
                     VTLEIDDNGHGAGASGAVPPASGNGQAGQASPAGQGGHHGLPGHGSGIVGMRERAQAL
                     GGALSAGPGQGGGFTVVATLPVGRPPEPSP"
     gene            2090..2755
                     /locus_tag="VKX24_09965"
     CDS             2090..2755
                     /locus_tag="VKX24_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010352972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ08855.1"
                     /translation="MIRVVLADDQALVRAGFRALLQTDPEIAVVGEASDGEEAVRQAR
                     SARPDVVLMDIRMPGTDGLEATRRITGDPRLEGVKVIVLTTFQLDEYVFEALRGGASG
                     FLVKDIEPADLLRGVRSVAAGDALLAPSVTRRLIEEFVARSKEPAAVPELSLLTERER
                     EVVALVAEGLSNQEIAERLVVSTATAKTHVSRAMMKLQARDRAQLVVKAYESGLVRPG
                     WVP"
     gene            complement(2831..>3285)
                     /locus_tag="VKX24_09970"
     CDS             complement(2831..>3285)
                     /locus_tag="VKX24_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020639778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HLJ08856.1"
                     /translation="DEYRRFLHQCPIFERLLVEDGILLRKYWFSVSDEEQERRFKARL
                     EDPMRRWKLSTTDMQSITHWEDYSRAKDEMLVHTDIPEARWHVVDSEDKRRARLNMIA
                     HLLSTIPYHEVAQVELHIPKRPHSNGYERPAKDTQEWVPDYAGTLLQK"
BASE COUNT          388 a         1169 c         1231 g          497 t
ORIGIN      
        1 cggaacggtt cagctccggg aaggcatcgg gcggttgtgc agcgtcacca gcgtgtgggc
       61 gccatccggc ccctcgatgt cgatcgtgcg ggcggtgaac ggcgacggcg ggtcgaactg
      121 gatcttccag ggatggatca caacgtggcg gtggggtccg tcgctgcccc cgtccacggc
      181 gacgatcacc gcgtcctccc gctcgctgta gctgaattcg gccagtggga cggcgaccgc
      241 ctcgggctcg ttgcccgcct ggcccatcac ttcgatgctg accgggttgc cctgctccgc
      301 ctcggcgatg acggcgagga aaccgggcca ctcctggcgg accggctgcc ggctcgcctg
      361 ctcgggcatg gggcgctcct tcctgtcgtg gccaccgccg gttgggggcc cggcggcagg
      421 ctgggtcctc aaaccctacc gcccccggcc cggtccctgg tgtgctccca ccggcggggc
      481 aactcgacgt cgaggccgtc gagcgcccgc accgcagcgt cgccggtgcg gtagatcctg
      541 ctcccgcgac cgcccgggcc gcctgccgca ccagtgtcgt ggtcatcgct gatcgtctcc
      601 tctcggttgg gggcgggtgc cctcgacggt gcaatcgtcg gcgctggagg cacccgggtc
      661 gccagcccgg aggcccgttc tggccggccg cttcagcgcc ctatcggccg ggcccggcta
      721 ctgcgcccgg gggggccggg ggtggtcgac tacgcccggc ggtgtattcc ggggagcgac
      781 ccgagggcga tgacatgccc cgggcgaagc cctacgctca tccggtgcgc ccgctgaccg
      841 ctgtcgccgg agcctcgccg gcctcgcccg cggcgctgcg ccgcgacgcc gtgctggcag
      901 cggtgctcgg ggcgttcatg ctggccggga ccttcggcgc tcagcgtcac ctggcccacg
      961 ccggcgcccc gccgttgcgt gacctcgacg tttggggcat cgccctgctg gtggcgatcg
     1021 ccgcctgcat ggccttccgg cgggcgtacc cggtggcggt gctcggcgcc gcgtccggcc
     1081 tgacccttgt ctacttcctg gccaactatg cgccgggacc ggtgtggctg ggcctggtgg
     1141 tcacctacgc cacggcggtg atcctggggc accggctggc cgccggggtc ggcgccttcg
     1201 cctgctacct ggcgttcccg tggctggccg acctgctcgg gcgcgggccg gcgcccactc
     1261 cgctgtacct cagcaccctg gccgccgggc tgctcctgct gttcggggtg tcggaggcgg
     1321 tgcggatgcg ccgccagcgg gcgaccgaag cggcacgccg gcgcagggag gaggcggcgg
     1381 cggcggccag cgaggagcgg ctcaggatcg cccgcgacct ccacgacgtc ctcgcccaca
     1441 acatctcgct gatcaacgtc caggccggag tggccctcca cgtcaacgac gggctcccgg
     1501 agcaggcccg ctcggcgctg tcggcgatca aggacgccag ccgggaggcg ctcggcgagc
     1561 tgcgctccgc cctcgacgcc ctgcgccagt ccggggaccc ggcgccgcgg cggccgtcgc
     1621 cgggcctcgg tcagctggac gacctggtgg ccggggcgcg ggcggccggg ctggaggcct
     1681 cggtcgaggt gctcggagag gcggtcgatc tgccgtcgcc ggtcgacgtc gccgcctacc
     1741 ggatcgtgca ggaggcgctc accaacgtga tccgccacgc cggggcctcc cgggtcgcca
     1801 tttcggtcgg ttacaccggg tcggcggtga ccctggagat cgatgacaac ggccacggcg
     1861 caggggcgtc cggggcggtg ccgccggcga gcggcaacgg ccaggcggga caggccagcc
     1921 cggctgggca gggtgggcac cacggattgc ccggccatgg cagcggcatc gtcggcatgc
     1981 gggaacgtgc ccaggccctc ggcggggcgc tgagcgcggg gccgggccag ggcggcggct
     2041 tcaccgtcgt cgctacgctc ccggtggggc gacccccgga gccgagcccg tgatccgcgt
     2101 ggtgctcgcc gatgaccagg cgctggtgcg ggccgggttc cgggcgttgc tgcagaccga
     2161 cccggagatc gcggtggtgg gggaggcctc cgacggcgag gaagcggtcc gccaggcgcg
     2221 gagcgcccgg ccggacgtcg tcctgatgga catccggatg cccggcaccg acggtttgga
     2281 ggccacccgc cggatcaccg gggacccgcg gctggagggg gtcaaggtca tcgtgctcac
     2341 caccttccag ctcgacgagt acgtcttcga ggccctccgc ggcggggcga gcggtttcct
     2401 ggtcaaggac atcgagcccg ccgacctgct gcgcggggtc cggtcggtcg ccgccggcga
     2461 cgccctgctc gccccgagtg tcacccggcg gctgatcgaa gagttcgtcg cccggtcgaa
     2521 ggagccggcg gctgtgcccg agctctcgct gctgaccgaa cgggagcggg aggtggtggc
     2581 cctggtggcc gaggggctgt cgaaccagga gatcgccgag cggctcgtcg tcagcaccgc
     2641 caccgccaag acccacgtca gccgggcgat gatgaagctg caggcccggg accgggcgca
     2701 gctggtggtg aaggcctacg aatcgggcct ggtccgcccc ggctgggtgc cgtagcggcc
     2761 cggcccgtcg ggagccaccc gaaccttggc atctgaggtg cgttttccag ctctcacgtg
     2821 ccaaagaacg ctatttctgc agcaacgtac ccgcgtagtc agggacccat tcctgggtgt
     2881 ccttggcggg acgctcgtag ccgttggagt ggggtcgctt cgggatgtgc agctccacct
     2941 gggcgacctc gtggtagggg atcgtcgaca gcaggtgggc gatcatgttc agccgggccc
     3001 ggcgcttgtc ctcgctgtcg acgacgtgcc agcgggcctc cgggatgtcg gtgtggacca
     3061 gcatctcgtc cttggcccgg gagtagtcct cccagtgcgt gatcgactgc atgtcggtgg
     3121 tcgacagctt ccaccgccgc atcgggtcct ccagccgggc cttgaaccgc cgctcctgct
     3181 cctcgtcgct gaccgagaac cagtacttcc gcagcaggat cccgtcctcg acgagcagcc
     3241 gctcgaagat cgggcactgg tgcaggaacc ggcggtactc gtcgg
//
LOCUS       DATGJT010000579         3916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_805873, whole genome shotgun sequence.
ACCESSION   DATGJT010000579 DATGJT010000000
VERSION     DATGJT010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805873"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="VKX24_09975"
     CDS             <1..548
                     /locus_tag="VKX24_09975"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HLJ08857.1"
                     /translation="PGAEAFARAAGLPFEPQDWFVTDRRRRDLARLAEPAVGSGGSTV
                     GAVARDAAGHLAAATSTGGRTGQLPGRVGDSPIPGAGTWADDATCAVSATGVGEAFLR
                     AAFAHEVDARLRLGGADLETACREALAAVTAAGGDGGCIAVAGEGPPVLPFTTALMHR
                     GWAEVGGALWVAAEPGPLERR"
     gene            619..966
                     /locus_tag="VKX24_09980"
     CDS             619..966
                     /locus_tag="VKX24_09980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08858.1"
                     /translation="MGMRTNCKFYESRTYATGESVRKCDLDLAPEAPWRCPENCPAFK
                     PRLADVGWSYGTLQTTLGPSSPEGFDETAAAVLDEAENIVNAVGPEILAEFKEQDERR
                     GLGAWLGRLKRRR"
     gene            complement(963..2177)
                     /locus_tag="VKX24_09985"
     CDS             complement(963..2177)
                     /locus_tag="VKX24_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007455256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HLJ08859.1"
                     /translation="MNPDRPTTEEVWRMLEAVVDPELHSSIVDLGMVRDVFVDVDGLV
                     SVEIALTIASCPLRGQIESDVESRLRGLPGVTGVEIRTGAMTAPERASLMAKARKQAA
                     ERAPETEIPLTTRVLAVASGKGGVGKSSVTVNLAAALGARGHVVGVLDADIWGFSVPR
                     MLGVNGRLGGADGKIHPNEVKVPSLRPNGEAGTLKVVSMGFLVEDEGMALMWRGLVLA
                     KAVEQFLTDVRWGELDYLLVDMPPGTGDIQMALSRLLPRAELLVVTTPALAAQKVAVR
                     VADMARRSYLKVAGVVENMSAFICDHGQSYPLFGSGGGAALAEEVHAPLLAQIPLEPG
                     VAAGGDTGSPLALSEPQSPAGQAFHLLAHRLATEIMPPVEMSGCTARIFAAAQANLAA
                     VDAAKAAAADAD"
     gene            2251..2955
                     /locus_tag="VKX24_09990"
     CDS             2251..2955
                     /locus_tag="VKX24_09990"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ08860.1"
                     /translation="MTDPLPVFKALGDDTRFAIYQELARSPAPLSATELAERLTLHPN
                     TVRPHLDRMREAGLVEVEPIHRGTVGRPQLRYSLAPGAPGLGLDPPAHTLLAGLLAAL
                     AEQLGGDGLDAANLGRRWGADATGRRQSGRGCLAALVAELDRLGFDPVESELGAGGTD
                     RRRVRVDFLHCPFRELAEAYPDLVCNLHRGIVEGVVGKSARTGQPAGMVEGFRTLIDR
                     DPCNVTVSVGYPEDGS"
     gene            2977..3297
                     /gene="erpA"
                     /locus_tag="VKX24_09995"
     CDS             2977..3297
                     /gene="erpA"
                     /locus_tag="VKX24_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HLJ08861.1"
                     /translation="MITVTDSAAKKVKELVEAEGNNELALRVAVRPGGCSGFSYEMFF
                     DSDFADDDQKAEFGGVKVVVDSASLQYLNGASLDYKEGLMGAGFTINNPNTNRTCGCG
                     QSFS"
     gene            3435..3740
                     /locus_tag="VKX24_10000"
     CDS             3435..3740
                     /locus_tag="VKX24_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08862.1"
                     /translation="MQPTAAVTEATEAPESTEAGGLTPGGARRLAELEETIRQARAVG
                     ALYHPTNPFDAWFCRTCHVFGRGGGVCWCCGESAVERQWVPRFGGGAETVTWEIEAA"
BASE COUNT          549 a         1450 c         1388 g          529 t
ORIGIN      
        1 gtcccggggc cgaggccttc gcccgcgccg ccgggctgcc cttcgagccc caggactggt
       61 tcgtcaccga ccgccgccgg cgggacctcg cccgcctcgc cgaaccggcc gtgggctccg
      121 gcggttcgac ggtcggcgcg gtggcccggg acgccgccgg ccacctggcg gcggcgacgt
      181 cgaccggcgg ccgcaccggc cagctccccg gccgggtcgg cgacagcccg atccccggcg
      241 ccggcacgtg ggccgacgac gccacctgcg ccgtgtcggc caccggcgtc ggcgaggcct
      301 tcctccgggc cgccttcgcc cacgaggtcg acgcccggct ccgcctcggc ggcgccgacc
      361 tggagaccgc ctgccgcgag gcgctggcgg cggtcacggc cgccggcggc gacggcggct
      421 gcatcgccgt ggccggcgag ggcccgccgg tgctcccgtt caccaccgcc ctcatgcacc
      481 ggggctgggc cgaggtcggc ggtgccctgt gggtcgccgc cgagccgggg ccgctggagc
      541 ggcgctgatc ggcgcgaacc ggtcacgccg ggcgacccgt cgtctctgtc cgtggggtgt
      601 ccccatacga tggaaggcgt gggaatgcgg accaactgca agttctacga gagccgcacg
      661 tacgccaccg gcgagtccgt ccggaagtgc gacctcgacc tcgcgcccga ggctccctgg
      721 cgctgcccgg agaactgccc ggccttcaag ccccgcctgg ccgacgtcgg ctggagctac
      781 ggcacgctcc agaccacgct cggcccttcc agccccgagg ggttcgacga gacggccgcc
      841 gccgtcctcg acgaggcgga gaacatcgtc aacgccgtgg gccccgagat cctcgccgag
      901 ttcaaggagc aggacgagcg ccgcggcctc ggcgcctggc tcggccggct gaagcgccgc
      961 cgttagtcgg cgtcggcggc cgccgccttg gcggcgtcga cggcggccag gttggcctgg
     1021 gcggcggcga agatccgggc cgtgcagccg gacatctcca ccggcggcat gatctcggtc
     1081 gccagccggt gggccagcag gtggaaggcc tgcccggccg ggctctgcgg ttcggacagg
     1141 gccagcggcg acccggtgtc gcccccggcc gccacgcccg gctccagcgg gatctgggcc
     1201 agcagcggcg catggacctc ctcggccagc gccgccccgc cgccggagcc gaacagcggg
     1261 tacgactggc cgtggtcaca gatgaaggcg ctcatgttct cgacgactcc ggccaccttc
     1321 agataggagc gccgggccat gtcggccacc cgcaccgcca ccttctgcgc cgccagcgcc
     1381 ggcgtcgtca ccaccaggag ctcggcccgg gggaggagcc gcgacagcgc catctggatg
     1441 tcgccggtgc ccggcggcat gtcgacgagg agatagtcga gctcgcccca gcggacatcg
     1501 gtcaggaact gctcgaccgc cttggccagg acgagccccc gccacatcag ggccatgccc
     1561 tcgtcctcca cgaggaagcc catggagacg accttgagcg tgccggcttc cccgttcggg
     1621 cgaagcgacg gaaccttcac ctcgttgggg tggatcttcc cgtcggcgcc gccgaggcgc
     1681 ccgttgacgc cgagcatccg gggcaccgag aacccccaga tatcggcgtc gaggacgccg
     1741 acgacatggc cgcgggcccc cagcgccgcg gccaggttga ccgtcaccga cgacttgccg
     1801 acgccgccct tcccgctggc cacggccagg acccgggtgg tgagcgggat ctcggtctcc
     1861 ggcgcccgct ccgcggcctg cttgcgggcc ttggccatca ggctggcccg ctcgggggcg
     1921 gtcatggcgc cggtgcggat ctcgacaccg gtcacgcccg ggagcccccg cagccggctc
     1981 tcgacgtcgc tctcgatctg gccccggagg gggcaggagg cgatggtgag ggcgatctcg
     2041 acgctgacca acccgtccac gtcgacgaag acgtcccgga ccatgccgag gtcgacgatg
     2101 ctggagtgca gctcgggatc gacgacggcc tcgagcatgc gccagacctc ttcggtcgtg
     2161 ggacggtcag ggttcatggc gccatattaa accggtcaac cccttgaaaa tattcctacc
     2221 ggcggctacg gtcaaccctg tgatgacgcg gtgaccgacc cgctcccggt cttcaaggcc
     2281 ctcggggacg acacgcgctt cgccatctac caggagctgg cccgctcgcc ggcgccgctg
     2341 tcggccaccg agctggccga gcggctgacc ctgcacccca acaccgtccg gccccacctc
     2401 gaccgcatgc gggaggccgg cctggtggag gtcgagccca tccaccgcgg gacggtcggc
     2461 cgcccccagc tccgctactc gctcgccccg ggcgctcccg gcctcggcct ggacccgccg
     2521 gcccacacgc tgctggcggg tctcctggcc gccctggccg agcagctcgg cggcgacggc
     2581 ctcgacgccg ccaacctcgg ccgccggtgg ggcgccgacg ccaccggccg ccgccagagc
     2641 gggcgcggct gcctggcggc cctggtggcc gagctcgacc ggctgggctt cgacccggtc
     2701 gagtcggagc tcggcgcggg cggcaccgac cgacgccggg tgcgggtcga tttcctgcac
     2761 tgccccttcc gggagctggc cgaggcttat cccgacctcg tctgcaatct ccaccggggg
     2821 atcgtcgaag gcgtggtggg caagagcgcc cgtacggggc aaccagcggg aatggtcgag
     2881 ggctttcgca cgttgatcga tcgcgacccg tgcaatgtga cggtgagcgt cgggtaccct
     2941 gaagatggtt cgtaggtttt ggaggaggcg acagcagtga tcaccgtgac cgattcggcg
     3001 gcgaagaagg taaaggagct cgtcgaggcc gaggggaaca acgagctggc cctccgtgtc
     3061 gcggtgcggc cgggtggctg ctccggcttc agctacgaga tgttcttcga cagcgacttc
     3121 gccgacgacg accagaaggc cgagttcggc ggggtaaagg tcgtggtcga ctcggccagc
     3181 ctgcagtacc tcaacggcgc ctccctcgac tacaaggaag gcctgatggg ggcggggttc
     3241 accatcaaca accccaacac caaccgaacc tgcggctgcg gccagtcctt ctcctgacct
     3301 agcgccaacg gcgcgaatgc gccgcacaaa cagggccctt cgggcggtcc tcatctcgcg
     3361 gtcgggctta agccgaggac gcgaacgtgc cgataaagaa atgaaaaggc acacccgcac
     3421 cttcggagga gatcatgcag ccgaccgccg ccgtcaccga ggctaccgag gctcccgagt
     3481 cgaccgaagc cggtggcctc acgcccggcg gcgcccggcg tctggctgaa ctggaggaga
     3541 cgatccggca ggcccgggcc gtcggcgccc tctaccaccc gacgaacccc ttcgacgcct
     3601 ggttctgccg cacgtgccac gtgttcggcc ggggaggcgg ggtgtgctgg tgctgcggcg
     3661 agagtgccgt cgaacgccag tgggttcccc gcttcggcgg cggggccgag actgtcacct
     3721 gggagatcga ggccgcctag gcccgggccc aagacagctt tggactttcg gtgcgacctg
     3781 tccgccgcga aagtccaaac ctcctggagc gtgccagcgg acgatcagtc ggaagggtcc
     3841 tcggcgtccc tcggggacgg gggttcgggc tcttcgccgg ccgcctccgc cgcctgggat
     3901 tcgtgccatt ccagcg
//
LOCUS       DATGJT010000580         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_806234, whole genome shotgun sequence.
ACCESSION   DATGJT010000580 DATGJT010000000
VERSION     DATGJT010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806234"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VKX24_10005"
     CDS             complement(<1..504)
                     /locus_tag="VKX24_10005"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08863.1"
                     /translation="MRILVVCTGNQHRSPMAQAILTALLTGRGISAQVRSAGFIMGGA
                     ALPTETGQALAAIGLDGALPSFRSVQATPEIMAGADLIVGMAREHVREVVVTVPDAWD
                     HTFTLKELVRRGGEVGPRAPDEDLDTWLARVGEDRTRSELLGSSADDDVEDPMGGRAS
                     EFERTARE"
     gene            complement(538..1494)
                     /locus_tag="VKX24_10010"
     CDS             complement(538..1494)
                     /locus_tag="VKX24_10010"
                     /inference="COORDINATES: protein motif:HMM:NF033747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class E sortase"
                     /protein_id="HLJ08864.1"
                     /translation="MSWRLVARLGEVIFAFGVLVLLFVAYQLWGTSITTQLHQDALRT
                     QFQHELAVLRAAHTPTTSTQPAAPSTTPPTATTTSTQPLRGVAPVVPGTAPAEGQPIG
                     TIAIPQIGADYVVVQGTGTADLELGPGHYTNTPLPGQPGNAAIAGHRTTYLHPFYNLN
                     ELTPGDPIYVETTQGRFEYEVSSIQTVDPSDVDVLQPTTVPTLTLTTCNPRYSASQRL
                     VVQATLVTPPAPVPKVDHPAGRDAAPPRSIGGLAGQNGSPWPAVAWGVPTAALFGLVW
                     LLARRRHRWHTRLAVFAAGLVPVLVLLFFFFQSVTPLLPASF"
     gene            1536..>2305
                     /locus_tag="VKX24_10015"
     CDS             1536..>2305
                     /locus_tag="VKX24_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08865.1"
                     /translation="MSQDVLSRPEIGRRSQREVSRLLVLFLTVASAVGGAVAGCHPTG
                     TPVVDPIETATFAAAFTLLSSRASRATWLVLGVACVLVARRWLLVPAVLEVALAFVAA
                     LMSRSRRRLGALIGALGVQVVLRWPPTIFHGLPSLVAACLFLFVGISASRRSARRTRR
                     IGLWVLGGLVAAAIVVTVPVVVAALLIRSQALAAEHSARAALTVIGTGSETSASADLR
                     AAASDARQADAALDWWITGGARAVPILAQQERYVTGAL"
BASE COUNT          309 a          752 c          870 g          374 t
ORIGIN      
        1 ctcccgggcg gtgcgctcga actcgctggc ccggcctccc atcgggtcct cgacgtcgtc
       61 gtcggcggac gagccgagga gctcagagcg tgtccggtct tcgccgaccc gggccagcca
      121 cgtgtcgagg tcctcgtccg gtgcccgcgg cccgacctcc cctccccggc ggaccagttc
      181 cttcagggtg aaggtgtggt cccaggcgtc ggggacggtc acgacgacct ctcgcacgtg
      241 ctcccgggcc atcccgacga tgagatcggc ccccgccatg atctcagggg tcgcctgcac
      301 actccggaac gacggcagcg caccgtcgag accgatggcg gcaagcgctt gtccggtctc
      361 ggtggggagc gcggcgccgc ccatgatgaa cccggccgag cggacctggg cggagatccc
      421 gcggccggtg agcagcgcgg tgaggatcgc ctgcgccatg ggggagcggt gctggttgcc
      481 ggtgcagacg acgaggatgc ggatgccggc cgagtgtagg ggaccggaag gaggaactca
      541 gaagctcgcg ggcaggagcg gtgtgacgct ctgaaagaag aagaagagga gcacgaggac
      601 gggcaccagg cctgccgcga acacagcgag tctcgtgtgc cagcggtgcc tgcggcgggc
      661 gagcagccag accaacccga agagcgcggc ggtcggaacg ccccaggcca ccgccggcca
      721 gggcgagccg ttctgaccgg ccaggccccc gatggaccga gggggtgcgg cgtcccgtcc
      781 cgcggggtgg tcgaccttcg ggaccggggc agggggggtg accagcgtgg cctgcacgac
      841 caggcgttgg gacgcgctgt accgcggatt gcaggtcgtc agggtgagtg tgggcacggt
      901 ggtcggctgg agaacgtcca catcgctcgg gtcgaccgtc tggatgctcg agacctcgta
      961 ctcgaagcgt ccctgcgtcg tctcgacgta gatgggatca cctggggtga gctcgttcag
     1021 gttgtagaag gggtggaggt aggtggtgcg gtgcccggcg atcgcggcgt tgccgggttg
     1081 accggggagg ggggtgttcg tgtagtggcc gggcccgagt tcgaggtccg ccgtccctgt
     1141 gccctgcacc acgacgtagt cggccccgat ctgaggaatg gcgatagtcc cgatcggctg
     1201 accttcggcc ggggcggtcc cggggacgac tggcgccacg cctcggaggg gctgggtgga
     1261 ggtagtcgtg gccgtgggcg gtgtcgtcga gggcgccgcc ggctgagtgg aggtggtggg
     1321 tgtgtgcgct gcccggagca ccgccagctc gtgctggaac tgcgtgcgca atgcgtcctg
     1381 gtggagctgc gtggtgatcg aggtgcccca gagttgatag gcgacgaaga gcaggacgag
     1441 gaccccgaag gcgaagatca cctcaccgag ccgggccacc aggcgccagg acacaacgca
     1501 tcgtaacggt cggcccgggc tacattcggg aacgcgtgag ccaggacgtg ctgtctcgcc
     1561 ccgagatcgg ccgacgctct cagcgagagg tctcccggct cctcgtcctc ttcttgacgg
     1621 ttgcctccgc ggttggcggc gccgttgctg ggtgccaccc gaccggcacc cctgtcgtcg
     1681 atccgatcga aacggcgacc ttcgctgccg cgttcaccct tctttccagc cgcgcctcaa
     1741 gggcgacctg gctcgtgctc ggggttgcct gtgtcctggt cgccaggcgc tggctgctcg
     1801 tccccgcggt cctcgaggtc gcgctggctt ttgtggctgc cctcatgtcg cgctcccggc
     1861 gccgcctcgg cgcacttatc ggcgccctcg gcgtgcaggt ggtattgcgc tggccgccga
     1921 cgatcttcca tggactcccg agcctcgtcg ccgcgtgcct gttcctcttc gtgggtatct
     1981 cagcatcgcg gcgatcggcg aggaggactc gtcgaatcgg gctctgggtg ctcggcgggt
     2041 tggtggccgc ggcgatcgtc gtcaccgtcc ccgtcgtcgt ggccgcgctt ctcatccgga
     2101 gtcaggctct tgccgccgag cactcggccc gggcggcttt aaccgtgatc gggacgggga
     2161 gcgaaacctc ggcgtccgcc gacctgcggg cggcggcgag cgatgcccgg caggccgacg
     2221 ccgccctgga ctggtggatc accgggggcg cccgggccgt cccgatcctc gctcagcagg
     2281 agcgatacgt gacgggtgcc cttca
//
LOCUS       DATGJT010000581         4192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_286300, whole genome shotgun sequence.
ACCESSION   DATGJT010000581 DATGJT010000000
VERSION     DATGJT010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286300"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..632)
                     /locus_tag="VKX24_10020"
     CDS             complement(39..632)
                     /locus_tag="VKX24_10020"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HLJ08866.1"
                     /translation="MGAQPVTRLSRRFGPSALRTPANLVTALRFALTVPLLRIIVEDG
                     VSWRAAMGWIVLACTDGLDGWLARRDGTTRSGAFLDPLADKFLAIGGLCALATQGIFP
                     WLAVGLITAREVGVSAYRTAAGRRGVSLPARQLGKMKTVFQLTAVGVALCPSTAEPAG
                     LALSILWVAVGLTVVSGLDIVLAAQRGGRPATTRPGP"
     gene            complement(634..1968)
                     /gene="rimO"
                     /locus_tag="VKX24_10025"
     CDS             complement(634..1968)
                     /gene="rimO"
                     /locus_tag="VKX24_10025"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HLJ08867.1"
                     /translation="MAPSGSAQGDSSRSGERYWIETLGCPKNAVDSDKVAASLLSDGL
                     RPARSAAEADLVVVNTCAFVEAARQESIDTVLALSDARKGGARLVVTGCLAERYGDEL
                     AAALPEADAVVGFASEGSIAEVVLRRPPKGGPRDLLELPRPAPAAPWAYVKVAEGCDR
                     TCAFCAIPSFRGKQRSRAPESIVAEARSLVEGGAREIVLVAQDLASYGRDAGAPGALA
                     PLLRSLDGLSSEGLARLRLLYLYPSQVREPLVGTMLDLATPVPYFDLSLQHASETLLR
                     SMRRWGSGERFLEMIDGIREREPAAAFRSSFIVGFPGETEADHEELLAFLDAAGLDWA
                     GLFPFSAEEGTSAAAMGGAVDDAVVKERLDELSLVQDRITQAGRDALVGSTVEVLVDG
                     YEDGVAIGRTHREAPEIDGVVRLEGAGRPAPGSIVTAEVVSAVGPDLVALAG"
     gene            2005..2469
                     /locus_tag="VKX24_10030"
     CDS             2005..2469
                     /locus_tag="VKX24_10030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08868.1"
                     /translation="MSQAPAVWCPACGAEYTIGSRYCSECRVELVVEPPPGDGGPGGG
                     DDEGADATDLVELGEYPRLHAQILRRRLETAGLSVMVEWSGPGGSALGTILVPDAQAE
                     FAEAVINEIEVDDEVPDSSPEAYIARIEEHLGVVGALLDELRTRIEETPAGE"
     gene            2634..2957
                     /locus_tag="VKX24_10035"
     CDS             2634..2957
                     /locus_tag="VKX24_10035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08869.1"
                     /translation="MYQFAIVALLALAVVKVVDFIDGAIPALSGFRSLLTFVFGIGAV
                     WALDYSLFSGFGIATRNRNVAMVMTGFIIAGLTVVWRALFGYMTHDRAATDETLGGSS
                     GLRAA"
     gene            complement(3030..>4192)
                     /locus_tag="VKX24_10040"
     CDS             complement(3030..>4192)
                     /locus_tag="VKX24_10040"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08870.1"
                     /translation="ANLGLVGAPNNPTLSTAASTPDRSVSQSRSHTFLVPQANASTPI
                     RKFGLASETRETIAPITFFKGSPQQFTLEFAGEWVLRTTSDGNTGTVFYGPGNVTPET
                     PLLRILDANGNLMSNIPEITTQTLFGPTGLNISLPGVANISIGGPPRMIGGAADSKPV
                     QTATLTAAAVDVVSVQLLQGDVRLADVRVGHMENATAVPAGGITCGIGLVKKSDKDLV
                     TPGQDFTWTVSVSNPNDCVLQQVKVVDTITADSPIIWTVDNATPAADQKANSGVTWND
                     VGPLNPGQSKDLTIHVIVSPTSGGGKFLDNAVATGVCGPAAGTAGAGAAVGVPLEARV
                     SLNLPEVSAALGALLPRELPRTGGALAVLPALALTGGGLALRRSSRRKRQRR"
BASE COUNT          605 a         1546 c         1488 g          553 t
ORIGIN      
        1 gaggagcagc tccgtgccca ccgccaggac gtcgcacctc acggcccggg cctcgtcgtg
       61 gccggccggc cgccccgctg ggcggcgagg acgatgtcga gccccgacac cacggtgagg
      121 cccaccgcca cccaaaggat cgacagcgcc agaccggccg gctcggcggt ggacgggcac
      181 agcgccactc ccaccgccgt cagctggaag acagtcttca tcttccccag ctgccgggcg
      241 ggcagcgaga ccccccgccg tccggcggcc gtccgatagg ccgacacgcc gacctcccgg
      301 gcggtgatca ggccgacggc cagccagggg aagatgccct gggtggcgag ggcgcagagc
      361 ccgccgatgg ccaggaactt gtcggccagc gggtcgagga aggccccgga gcgggtcgtg
      421 ccgtcgcgcc gggccagcca cccgtcgagg ccgtcggtgc aggcgagcac gatccagccc
      481 atggccgccc gccacgacac cccgtcctcc acgatgatcc gcagcagcgg gaccgtgagg
      541 gcgaagcgca gcgcggtgac gaggttggcc ggcgtccgca gcgcgctggg cccgaagcgg
      601 cgggagaggc gggtgaccgg ctgggcgccc atgtcagccc gccaacgcca ccagatcggg
      661 cccgaccgcc gacaccacct cggccgtcac gatcgaaccg ggcgccgggc gccccgcgcc
      721 ctcgagccgg accacgccgt cgatttccgg cgcctcccgg tgcgtccgcc cgatggccac
      781 gccgtcctcg taaccgtcca ccagtacttc gaccgtgctc cccaccagcg cgtcacggcc
      841 cgcctgggtg atgcggtcct gcaccaggga cagctcgtcg agccgctcct tcacgacggc
      901 gtcgtcgacg gcgccgccca tcgccgccgc cgacgtcccc tcctcggcgg agaacgggaa
      961 cagcccggcc cagtcgaggc cggcggcgtc gaggaaggcc agcagctcct cgtggtcggc
     1021 ctcggtctcg ccggggaagc cgacgatgaa cgacgaccgg aaggcggccg ccggctcccg
     1081 ctcccggatc ccgtcgatca tctccaggaa ccgctccccg ctcccccacc gccgcatgct
     1141 ccgcagcagc gtttccgagg cgtgctggag cgacaggtcg aagtacggca ccggcgtcgc
     1201 caggtcgagc atggtgccca ccaggggctc acggacctgc gacggataga ggtacagcag
     1261 ccgcagccgg gccaggccct ccgaggacag gccgtcgagc gaccggagca acggcgccag
     1321 cgctccgggc gccccggcgt cgcgcccgta ggaggcgagg tcctgggcca cgaggacgat
     1381 ctcccgcgcc ccgccctcca ccagcgagcg ggcctcggcc acgatcgact ccggtgcacg
     1441 ggaccgctgc ttgccccgga acgacgggat ggcgcagaag gcgcaggtgc ggtcgcagcc
     1501 ctcggccacc ttgacgtagg cccacggcgc cgccggcgcc ggccggggca gctcgaggag
     1561 atcccgcggg ccgcccttcg gcggccggcg cagcaccacc tcggcgatcg acccttccga
     1621 ggcgaacccg acgacggcgt cggcttccgg cagggccgcc gccagctcgt cgccgtagcg
     1681 ctcggccagg cagcccgtca cgacgagccg ggcaccgccc ttgcgggcat cggagagggc
     1741 cagcacggtg tcgatcgact cctgccgggc ggcctcgacg aaggcacagg tgttgaccac
     1801 gacgaggtcg gcctcggcgg cggaacgggc cgggcgcagc ccgtccgaga gaagcgaggc
     1861 cgccaccttg tcggagtcga cggcgttctt cgggcagccg agcgtctcga tccagtaccg
     1921 ctcgccggag cgcgaagaat ccccctgcgc tgatcccgac ggagccatga cagcgcctag
     1981 cgtaccgggc aggaggtgaa cggcatgtcc caagcaccgg ccgtctggtg cccggcctgc
     2041 ggcgccgagt acacgatcgg gtcgcggtac tgcagcgagt gccgcgtcga gctcgtcgtc
     2101 gagccccctc ccggcgatgg cggcccgggc ggcggcgacg acgaaggagc cgacgccacc
     2161 gacctcgtcg agctcggcga gtacccccgc ctccacgccc agatcctccg ccgccgtctg
     2221 gagaccgccg gactgtcggt gatggtcgag tggagcggtc cgggcggctc ggccctcggc
     2281 acgatcctcg tccccgacgc ccaggcggaa ttcgccgagg ccgtcatcaa cgagatcgag
     2341 gtcgacgacg aggtgcccga cagctcgccc gaggcctaca tcgcccgcat cgaggagcac
     2401 ctgggcgtcg tcggcgccct gctcgacgag ctccgcaccc gcatcgagga aacgccggcc
     2461 ggcgagtagt cgcaccgccc gtttgcaagg cgatccacca atcgttgcgc aaatgtaaca
     2521 gtgcgctccg ttacctctgg acaccgcgcc cggtctgatt gtgtgaaggc caaaggaggc
     2581 cctcaccggg atccggagaa tcaccgagat cccaacacca ggaggtgttc tgcatgtacc
     2641 agttcgccat cgtggcgctg ctggccctcg ccgtcgtcaa ggtcgtcgac ttcatcgacg
     2701 gcgcgatccc ggccctgtcc ggattccgct cgctcctcac cttcgtgttc gggatcggcg
     2761 ccgtgtgggc gctcgactac tccctcttct ccggcttcgg catcgccacc cggaaccgca
     2821 acgtggcgat ggtcatgacg ggcttcatca tcgccgggct gacggtggtc tggcgggcgc
     2881 tgttcgggta catgacccac gaccgcgccg ccaccgacga gaccctcggc gggtcgtcgg
     2941 ggctgcgggc cgcataggac ggcgcaacga cgtagagagg ggggtgcccg ccgggcaccc
     3001 ccctctgacg cgtgacggac cgaaatccgt taccgccgct gacgcttgcg ccggctggaa
     3061 cgccgcaggg ccagcccgcc gccggtgagg gcgagcgccg gcagcacggc cagcgcaccg
     3121 ccggtgcggg gcagctcccg gggcagtagg gccccgaggg cggcgctgac ctcgggcagg
     3181 ttcaggctga cccgggcctc gagcggcacg ccgaccgccg caccggctcc ggccgtgccc
     3241 gccgccggcc cgcacacacc ggtggccacg gcgttgtcga ggaacttccc gccgcccgac
     3301 gtcggcgaga cgatcacgtg gatcgtcagg tccttgctct gccccggatt cagcggcccc
     3361 acgtcgttcc acgtcacgcc gctgttcgcc ttctggtccg ccgccggggt ggcgttgtcg
     3421 accgtccaga tgatggggct gtcggcggtg atggtgtcga cgaccttgac ctgctggagg
     3481 acgcagtcgt tggggttgct gacgctgacc gtccaggtga agtcctggcc gggcgtcacg
     3541 aggtccttgt cgctcttctt caccagcccg atgccgcagg tgatcccgcc ggccgggacg
     3601 gcggtggcgt tctccatgtg accgacgcgc acgtcggcca gccggacgtc gccctggagg
     3661 agctgcaccg acaccacgtc gacggcggcg gcggtcagcg tggcggtctg gaccggcttg
     3721 ctgtcggcgg cgccgccgat catgcggggc ggcccgccga tgctgatgtt ggccacgccc
     3781 gggaggctga tgttgaggcc ggtcgggccg aacagcgtct gggtcgtgat ctcggggatg
     3841 ttggacatca ggttcccgtt ggcgtcgagg atccgcagca gcggcgtctc cggcgtcacg
     3901 ttcccggggc cgtagaacac ggtgccggtg ttgccgtcgg acgtcgtccg cagcacccac
     3961 tcgccggcga actccagcgt gaactgctgg ggcgacccct tgaagaacgt gatcggggcg
     4021 atcgtctccc gggtctcgct ggccagaccg aacttgcgga tgggcgtcga ggcgttggcc
     4081 tggggaacga ggaaggtgtg cgaccgggac tgcgacacgc tccggtccgg cgtggacgcc
     4141 gccgtcgaca gcgtcggatt gttcggcgcg ccgacgaggc cgaggttggc gg
//
LOCUS       DATGJT010000582         2309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1217578, whole genome shotgun sequence.
ACCESSION   DATGJT010000582 DATGJT010000000
VERSION     DATGJT010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217578"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VKX24_10045"
     CDS             <1..813
                     /locus_tag="VKX24_10045"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010693272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HLJ08871.1"
                     /translation="ESAWTQEQVLGTVPVLGPLETMAYAVACTTRLRFGCAVLITTLH
                     SPVHLAKSVSTLDQLSRGRVEIGVGTGGRRMFSAFGVVPETFVARFSEGIELMKALWT
                     QPEVKFAGRFWQVEGAAMEPKPFQKPYPPLWFGGNAPTALRRAARHGDGFIGAGSQTT
                     AAFAEQVPVVREALAEQGRTDFRIAKRVYLAVDDDVVRARERLSAALERLYSFFGVGD
                     LTPVAVYGPPAACIEGLAAVAEAGAEMILLNPLFDEAEQMERLAADVMPHVG"
     gene            complement(1046..1417)
                     /locus_tag="VKX24_10050"
     CDS             complement(1046..1417)
                     /locus_tag="VKX24_10050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08872.1"
                     /translation="MGANRRRPNSMLLLAALLLFGTLNAASGDAAGWAGPSGRPAALV
                     AAANAAALTAPAALDTRLLAEARAERAPGASRHDGLSAAGPRGPGSGRAERRVAAAVE
                     RAAHPERRSGTRLRGPPGLPV"
     gene            1565..>2309
                     /locus_tag="VKX24_10055"
     CDS             1565..>2309
                     /locus_tag="VKX24_10055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08873.1"
                     /translation="MFRRTTPDPTMSGRRPLQPRLMMATGALLAVGAVGVALLLGSQR
                     PSGEALAEAAASGAAPGPAAPPAAPAGAGIDPGPSSSTTTSTPAASAPAATAGPAPAP
                     ALPTGPAGPPPTATAGAGAARARPNPAPPAPPAARPAPAPTSSTSGDPAAQLRQVQAI
                     ADTSGWGWRQVHVNFRIGFDPAACCHWGVYDPSDHKTIWIGPTAFDDPARLRYVVLHE
                     LAHAWQWHSHRLTKLEADMAPWGYSGLDAL"
BASE COUNT          295 a          908 c          848 g          258 t
ORIGIN      
        1 gagagcgcct ggacgcagga gcaggtgctc ggaaccgtcc cggtgctggg gccgctggag
       61 accatggcct acgccgtggc ctgcacgacg aggctgcgct tcgggtgcgc cgtgctgatc
      121 accacgctgc acagtcccgt ccacctggcc aagagcgtca gcaccctcga ccagctcagc
      181 cggggccgcg tcgagatcgg cgtcggtacc ggcgggcgga ggatgttctc ggccttcggc
      241 gtcgtgccgg agacgttcgt cgcccgcttc agcgaaggca tcgagctcat gaaggcgctg
      301 tggacgcagc ccgaggtgaa gttcgccggc cgcttctggc aggtcgaggg ggcggccatg
      361 gaaccgaagc cgttccagaa gccctacccg ccgctgtggt tcggcggcaa cgcccctacc
      421 gcgctgcgcc gggccgcccg ccacggcgac ggcttcatcg gcgccggttc ccagaccacc
      481 gctgccttcg ccgaacaggt tccggtcgtg cgggaggcgc tggccgaaca gggccggacg
      541 gatttccgca tcgccaaacg ggtctacctg gcggtcgacg acgacgtcgt ccgggcccgg
      601 gagcggctct cggcggccct ggagcggctc tacagcttct tcggcgtggg cgacctcaca
      661 cccgtcgccg tctacggccc gcccgccgcc tgcatcgagg gcctcgccgc cgtcgccgaa
      721 gccggcgccg agatgatcct cctcaacccg ctcttcgatg aggcggagca gatggagcgc
      781 ctggccgccg acgtcatgcc gcacgtcggc tgacgggcgc cgggccggcg cacggaacgg
      841 ttcgccccgt gcgccggccc gcgccgtccg gcgaggttca gcggggcgag ccgccccaga
      901 agagcaggaa ccccatgatg gccaggaacg cgacggcgcc caacagcgcc gacacctcga
      961 gcacgccgaa gcgcgccagg accgcgacgg tctgcaacgg attacctcct gtcgatgccc
     1021 gccgggaggc gggcgagcct gtcggtcaga ccggcaggcc gggagggccc cggaggcggg
     1081 ttccgcttcg ccgctcggga tgggcggccc gctcgacggc ggccgccacc cgccgctcgg
     1141 cccggccgga ccccgggccg cgggggccgg cggccgacag cccgtcgtgg cgggaggccc
     1201 ccggcgcccg ttcggccctg gcctcggcca gcagccgggt gtcgagggcg gccggggcgg
     1261 tgagggcggc ggcgttggcc gcggcgacga gggcggcggg ccgtccggag ggcccggccc
     1321 aaccggcggc gtcgcccgac gcggcgttga gggtgccgaa cagcagcagg gcggcgagca
     1381 gcagcatcga gttcggccgc cgccggttcg cacccatcac accagcctac cggcggcggg
     1441 cggccggcct cccggcccga aaagctcaag cccgctgaat gtggagcgga atgcccgcat
     1501 ggggcgtaac ggacaacccc gccccggcgc tctgctatca ggtccctccc cccacggagg
     1561 tcggatgttc cgacgaacga cgcccgaccc gacgatgtcc ggccgaaggc cgctccagcc
     1621 ccgcctgatg atggccacgg gcgccctcct cgccgtcggc gccgtcggcg tcgccctcct
     1681 cctcgggtcg caacggccgt cgggagaggc gctggccgag gcggccgcat ccggggcggc
     1741 ccccgggccc gccgcacctc cggcggcgcc ggccggggcg ggcatcgacc ccggcccgtc
     1801 ctcctcgacg accaccagca cgccggcggc gagcgcgccg gccgcgacgg ccggtccggc
     1861 gcccgctccc gccctcccga ccggccccgc cgggccgccg ccgacggcca cggcgggcgc
     1921 cggcgcagcg cgggcccggc cgaacccggc gccgcccgct ccgccggcgg cccgtccggc
     1981 gccggcgccg accagctcga ccagcggcga tcccgccgcc cagctgcggc aggtgcaggc
     2041 catcgccgac accagcggct ggggctggcg ccaggtccac gtgaatttcc ggatcggctt
     2101 cgaccccgcc gcctgctgcc actggggggt ctacgacccg agcgaccaca agacgatctg
     2161 gatcgggccg acggccttcg acgacccggc ccggctgcgc tacgtcgtcc tccacgagct
     2221 ggcccacgcc tggcagtggc actcccatcg gctgaccaag ctggaggccg acatggcgcc
     2281 gtggggctac agcggcctcg acgccctcg
//
LOCUS       DATGJT010000583         2698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_183981, whole genome shotgun sequence.
ACCESSION   DATGJT010000583 DATGJT010000000
VERSION     DATGJT010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183981"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VKX24_10060"
     CDS             <1..446
                     /locus_tag="VKX24_10060"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HLJ08874.1"
                     /translation="AVGNAFGPIITGEAWANDRHLVEEDPTGVSGPVTDRLRIGAGVT
                     AAMADEARQIQAAWRAEVMAALGRVQVFALPTLLCFAPLLSAPETVNLSALTHPFNVS
                     GSPALALPVPAAGTHLPASLQLVGPLGGEELLCATAARVEAAVGR"
     gene            512..1339
                     /locus_tag="VKX24_10065"
     CDS             512..1339
                     /locus_tag="VKX24_10065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018501713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ08875.1"
                     /translation="MGVLEGKTAIVTGASRGIGEYIARRFASEGAAVAVAARTVEQHD
                     ERFPGTIFETVDIIRRAGGIALAVPTDLSRAEDRARLVETTTGELGPVDILVNNAAVT
                     YFLPVLEFPEARFDLMFEVQVRAPFELSQLVLPGMKERGSGWILNISSGAARHPRVPP
                     PSGAAAGRGGTVYGMVKAAIERFSTGLASEVYGDGIAVNALSPSRGVMTPGVVYHFGV
                     SDPAARIADGTAEAPEVMAEAALALCSGDPAELTGRVTYSQALLDELGRTPGPLDGA"
     gene            complement(1361..>2698)
                     /locus_tag="VKX24_10070"
     CDS             complement(1361..>2698)
                     /locus_tag="VKX24_10070"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ08876.1"
                     /translation="AFMGQLDASIVTVAFPTFERVFGASVGAVSWVGLAYLIVLVAGV
                     TAVGRLADMVGRKLLYSYGFLVFIVGSALCAAAPNLLALDLFRVVQALGAVMLQANSL
                     AIIYLALPEDRLVRGLGIQGAAQALGLALGPSVGGLLLAAGGWRLIFLVNIPAGLLGT
                     LAARMLVPRSRDLQARVPYDWGGLALFVPAVGVLLVALSFGNRWGWASPLSVVLLALA
                     AFGAGAFVAKERRSEHPMVDPSLFARPAFTMGIASGLLSYLVLFGTMFAVPFFLERAR
                     GAGAGHAGLVLSALPLALGCVATAAGRVAEHVGPRIPTAVGMAVAAAGLVVLGLSTPT
                     AGPLAAGLAVVGAGLGLFTPANNSAIMRAAPRRQAGVASGVLNMTRGLGTALGLAVTG
                     VVLGGGLHTPAAAASAFGRAAILLGAVAAVAAVLALARGHEVAPRGAAAPEGP"
BASE COUNT          387 a         1013 c         1018 g          280 t
ORIGIN      
        1 cggccgtcgg caacgccttc gggccgatca tcaccgggga ggcctgggcc aacgaccgcc
       61 acctcgtcga ggaggacccg accggggtga gcgggccggt cacggaccgc ctgcgcatcg
      121 gcgccggggt caccgcggcg atggccgacg aggcgcgcca gatccaggcc gcgtggagag
      181 ccgaggtcat ggccgccctg ggccgggtcc aggtgttcgc cctgccgacg ctcctgtgct
      241 tcgcacccct cctcagcgcg ccggagacgg tcaatctctc ggcgctcacc caccccttca
      301 acgtgagcgg ctcgccggcc ctcgccctcc ccgtcccggc ggccggcacg cacctgccgg
      361 ccagcctcca gctggtcggg ccgctcggcg gcgaggagct gctctgtgcg accgcggccc
      421 gtgtcgaggc agccgtcggg cgctgagccc gggcaccgcc gtcgggcgca gggttaggtt
      481 cggaggacca cagccgacag ggaggtgcgc cgtgggcgtg ctcgagggaa agacggccat
      541 cgtcaccggg gccagccggg gcatcggcga gtacatcgcc cgccgcttcg cgtccgaggg
      601 cgcggcggtg gccgtcgcgg cacggacggt cgagcagcac gacgagcgct tcccgggcac
      661 gatcttcgag accgtggaca tcatccggcg cgccggcggc atcgcgctcg ccgtgccgac
      721 ggatctgtcg agggccgagg accgggctcg tctggtcgag acgacgacgg gcgagctcgg
      781 accggtcgac atcctcgtca acaacgccgc cgtcacctac ttcctgccag tgctggagtt
      841 cccggaggcc cgcttcgacc tcatgttcga ggtgcaggtg cgggctccct tcgagctgag
      901 ccagctggtc ctccccggga tgaaagagcg cggcagcggc tggatcctca acatctcctc
      961 gggggcggcc cgccatcccc gggtgccccc accctccggg gccgcagcgg gccggggcgg
     1021 caccgtctac ggcatggtga aggccgccat cgagcggttc tccaccggcc tcgcctccga
     1081 ggtctacggc gacggcatcg ccgtcaacgc gctgtccccg agccgggggg tgatgacccc
     1141 gggcgtcgtc taccacttcg gggtgtcgga cccagcggcg cgcatcgccg acggcacggc
     1201 cgaggcgccc gaggtgatgg ccgaggcggc gctcgccctg tgctcgggcg acccggccga
     1261 gctcaccggg cgcgtcacct acagccaggc cctgctcgac gagctcggcc gcacccccgg
     1321 cccgctcgac ggcgcctgat ccaggcggcg gccctcggcg tcaggggccc tccggcgccg
     1381 ctgccccgcg gggggcgacc tcgtgcccgc gggccagggc gaggaccgcg gcgacggcgg
     1441 cgaccgcacc gaggaggatc gccgccctcc cgaaggccga ggccgcggcg gccggcgtgt
     1501 gcaggccgcc cccgagcacg acgccggtga cggcgagccc gagggccgtc ccgaggcccc
     1561 gggtcatgtt gagcaccccg ctcgccaccc cggcctggcg gcgcggcgcg gcgcgcatga
     1621 tggccgagtt gttggccggc gtgaacaggc cgaggccggc tccgacgacg gccagcccgg
     1681 ccgcgagcgg gcccgcggtc ggggtgctca ggcccaagac gaccagaccc gccgcggcga
     1741 cggccatgcc caccgccgtc gggatccgcg ggccgacgtg ctcggcgaca cgccccgcgg
     1801 ccgtggcgac gcagccgagg gcgagtggga gggcgctcag cacgaggccg gcgtgccccg
     1861 ccccggcgcc gcgggcccgc tcgaggaaga agggcaccgc gaacatcgtg ccgaacagca
     1921 ccagatagga gagcaggccg ctcgcgatgc ccatcgtgaa ggccggccgg gcgaacagcg
     1981 acgggtcgac catcgggtgc tcgctcctgc gctccttggc gacgaacgcc cccgcgccga
     2041 aggcggccaa ggcgagcagg accaccgaca ggggcgacgc ccacccccac cggttgccga
     2101 aggagagggc gaccaggagc accccgacgg ccggcacgaa cagcgccagg ccgccccagt
     2161 cgtaggggac gcgggcctgg aggtcgcggc tgcggggcac gagcatccgg gcggccaggg
     2221 tcccgagcag cccggccggg atgttgacga ggaagatcag ccgccaaccg ccggcggcga
     2281 ggagcaggcc gccgacgctc ggcccgaggg ccagcccgag cgcctgggcc gcaccctgga
     2341 tgccgagccc gcggacgaga cggtcctcgg ggagcgccag gtagatgatg gcgaggctgt
     2401 tggcctgcag catgaccgcc ccgagcgcct ggacgacccg gaacaggtcc agggcgagca
     2461 ggttgggcgc ggccgcgcac agcgcggacc cgacgatgaa gacgaggaag ccgtagctgt
     2521 agagcagctt gcggccgacc atgtcggcca gccggccgac ggcggtgacg ccggccacca
     2581 gcacgatcag gtaggccagc cccacccagc tgacggcgcc gaccgaggcc ccgaacaccc
     2641 gctcgaacgt cgggaaggcg acggtgacga tgctcgcgtc gagctggccc atgaaggc
//
LOCUS       DATGJT010000584         3134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_910504, whole genome shotgun sequence.
ACCESSION   DATGJT010000584 DATGJT010000000
VERSION     DATGJT010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910504"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VKX24_10075"
     CDS             complement(<1..400)
                     /locus_tag="VKX24_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008742257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HLJ08877.1"
                     /translation="MSGRAGRDGRRGHAHAAHLGHAHQANHAGQALQTGDAPSRNGRA
                     GDATGRVGDATGRVGDGRQDNRRQLATALGLILALMAAEVVVGAVAHSLALLSDAAHM
                     LTDAAALGLALAAAAVAARPAKGALTFGLRR"
     gene            478..1524
                     /gene="argC"
                     /locus_tag="VKX24_10080"
     CDS             478..1524
                     /gene="argC"
                     /locus_tag="VKX24_10080"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HLJ08878.1"
                     /translation="MSNTYSKPCRAAVLGASGFAGGELLRILSRHPGIEVVAAAASSQ
                     VGKPLAHAYPGLGLDGAFLPVEAALAAEPDVLFASLPHTQSMAVLGGWEGPVAIDLGG
                     DFRLDEPAAYEQWYGEPHDYPEQMSRWTYGLTEWHRAEVSAARRVANPGCYPTASILP
                     LAPLLAAGAITPSGIHIDAQSGVSGAGRASGEGFDFVAVNENLRPYSPTGHKHIAEIE
                     QDLSAVAGAEVVVSFVPHLVPVTRGLLATCSAPLAHPATTPELLAVLHDRYDAEPFVR
                     VLDADRLPETRRVTGTNVAEVTVRVDTRSGRAIAMAAIDNLGKGAAGQAVQNANLMLG
                     FPEVTALDVAGLLP"
     gene            1521..2711
                     /gene="argJ"
                     /locus_tag="VKX24_10085"
     CDS             1521..2711
                     /gene="argJ"
                     /locus_tag="VKX24_10085"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007289345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HLJ08879.1"
                     /translation="MSASEFTESVAGVCAAAGFRAAGVAAGIKASGGKDLVLVVSDTP
                     AAAAGTFTTHKACAAPVLVTRDRVRSGTSRGVVVNAGCANAATGRRGLEDAMTMASLA
                     AAAVGAPAAQLLVCSTGKIGGYLPMDKVAAGITEAAAELGTDDEAAARAILTTDTRPK
                     RAAVAHPDGWSLGGMAKGAGMIAPNMATMLAFLTTDAVVAPELLREALPAAVAATFNL
                     ITVDGDPSTNDTVLVFANGSSGVTPDGDDVAKALHNVCRRLAEAIVADGEGATKFVRV
                     RVRGAATAGEARRAARTVADSLLVKTALFGSDANWGRVYAAVGKSEVALDFDALSIAM
                     AGVTVFDRGFPVGDEAVRQAEQALKAREIAIDCDLGVGDGAAEILTTDLSRGYVDINA
                     EYEP"
     gene            2720..>3134
                     /gene="argB"
                     /locus_tag="VKX24_10090"
     CDS             2720..>3134
                     /gene="argB"
                     /locus_tag="VKX24_10090"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HLJ08880.1"
                     /translation="MAQTKAQILTEALPYIHRWAGRRVVVKAGGESVDQEEMLDSLAR
                     DVALMRAVGLFPVLVHGGGKQISKAMRDSGQQPVFIGGRRVTGADTIATVREVLWDIN
                     AQIVEALRRHGAEAVGVAGDEDGLLATHRAYGPAGE"
BASE COUNT          412 a         1163 c         1145 g          414 t
ORIGIN      
        1 tccggcgcag accgaaggtc agggcgccct tggccggacg ggcggcgacc gcggcggcgg
       61 cgagcgccag accgagcgcg gcggcatcgg tcagcatgtg cgccgcgtcg gagagcagcg
      121 ccagcgagtg ggcgaccgcg cccaccacga cctcggcggc catgagggcg aggatcagcc
      181 cgagggcggt ggccagctgg cgccggttgt cctgcctgcc atcgccgacc cggccggtcg
      241 catcgccgac ccggccggtc gcatcgccgg cccgcccgtt cctgctgggc gcgtcgccgg
      301 tctggagggc ctgcccggcg tggttcgcct ggtgggcatg ccccaggtgg gccgcgtgcg
      361 cgtgcccacg acgcccatcg cgaccggctc gcccgctcat gctcccattg tctcgccgcc
      421 ggcccggggt ccgtcgccgg acgacgagcg gcgggggatc gtgtatgctc atgcatcatg
      481 tcgaatactt attcgaagcc gtgccgggcc gccgtcctcg gcgcatcggg cttcgccggc
      541 ggggagctgc tccggatcct gtcccgccat ccgggtatcg aggtcgttgc cgcagcggcg
      601 tcctcccagg tcggcaagcc gctggcccac gcctatcccg gcctcggcct cgacggggcc
      661 ttcctcccgg tggaggcggc actcgccgcc gagccggacg tgctgttcgc ctcactcccg
      721 cacacccaga gcatggccgt gctgggcggg tgggagggcc cggtcgccat cgacctcggg
      781 ggcgacttcc ggctcgacga accggccgcc tacgagcagt ggtacggcga gccgcacgac
      841 tacccggagc agatgagccg ctggacctac gggctgaccg aatggcaccg ggccgaggtc
      901 tccgccgccc ggcgggtcgc caacccgggc tgctacccca cggcatcgat cctgccactt
      961 gcgccgctgc tcgccgccgg ggcgatcacg ccctccggca tccacatcga tgcccagtcc
     1021 ggcgtctccg gggcggggcg ggcgtcgggg gaggggttcg acttcgtcgc cgtcaacgag
     1081 aacctgcgcc cgtacagccc gaccggccac aagcacattg ccgagatcga gcaggatctg
     1141 tccgccgtcg ccggggccga ggtcgtcgtg agcttcgtcc cgcacctcgt cccggtcacc
     1201 cgggggctgc tggcgacctg ctcggcgccg ctcgcccacc cggccaccac gcccgagctg
     1261 ctggcggtcc tgcacgatcg ctacgacgcc gagccgttcg tgcgggtgct cgacgccgac
     1321 cggctgccgg agacccggag ggttaccggg accaacgtcg ccgaggtcac ggtccgggtg
     1381 gacacccgct cggggcgggc gatcgccatg gcggcgatcg acaacctggg caagggtgcg
     1441 gcggggcagg cggtgcagaa cgccaatctg atgctcggct ttcccgaggt caccgcgctc
     1501 gacgtcgccg ggctgctgcc gtgagcgcca gcgagttcac cgagtcggtg gccggggtgt
     1561 gcgccgccgc cgggttccgg gccgccggcg tcgccgccgg gatcaaagcc agcgggggca
     1621 aggacctggt gctcgtcgtc tccgacaccc cggcggccgc cgccggcacg ttcactaccc
     1681 acaaggcctg cgccgcgccg gtcctggtca cccgtgaccg ggtccgctcc ggtacctccc
     1741 ggggggtcgt cgtcaacgcc gggtgcgcca acgcggccac cggccgccgg ggcctcgagg
     1801 acgccatgac gatggcctcg cttgccgccg ccgccgtcgg tgcgccggcc gcccagctcc
     1861 tggtctgctc gaccggcaag atcggcggct acctgccgat ggacaaggtc gctgccggca
     1921 tcaccgaggc cgccgccgag ctgggcaccg acgacgaggc cgccgcccgg gcgatcctga
     1981 ccaccgacac ccggccgaag cgggcggcgg tggcgcaccc agacgggtgg agcctcggcg
     2041 ggatggccaa gggggccggc atgatcgccc cgaacatggc aacgatgctg gcgttcctga
     2101 cgaccgacgc cgtggtagcg ccggagctgc tccgggaggc gctgccggcg gcggtcgccg
     2161 ccacgttcaa cctgatcacc gtcgacgggg acccgagcac caacgacacc gtcctcgtct
     2221 tcgccaacgg gtcgtccggg gtcacgccgg acggggacga cgtggccaag gccctccaca
     2281 acgtctgccg gcgcctggcc gaggcgatcg tggccgacgg ggagggagcg accaagttcg
     2341 tccgggtccg ggtgcgcggt gccgccaccg ccggcgaggc ccgccgggct gcccggacgg
     2401 tcgccgactc gctgctcgtc aagacggcgc tgttcggctc cgacgccaac tggggccggg
     2461 tgtacgccgc agtcggcaag tccgaggtcg ccctggactt cgacgccctg tccatcgcca
     2521 tggccggcgt cacggtcttc gaccgcggct tcccggtggg cgacgaggcg gtgcgccagg
     2581 ccgagcaggc gctcaaggcc cgggagatcg ccatcgactg cgacctcggt gtcggtgacg
     2641 gcgctgccga gatcctcacc accgacctct cccgcggcta cgtcgacatc aacgccgagt
     2701 acgagccatg aggctgcaca tggcgcagac caaggcgcag atcctgaccg aggccctgcc
     2761 ctatatccac cggtgggctg gccggcgggt ggtcgtcaag gccggcgggg agtcggtcga
     2821 ccaggaggag atgctcgact ccctggcccg ggacgtcgcc ctgatgcgag ccgtcggcct
     2881 gttccccgtc cttgtccacg gaggcggcaa gcagatctcc aaggcgatgc gggactccgg
     2941 ccagcaaccg gtgttcatcg gcgggcggcg ggtgaccggg gcggacacca tcgccaccgt
     3001 acgcgaggtc ctgtgggaca tcaacgccca gatcgtcgag gcgctacgcc gtcatggggc
     3061 tgaggcggtc ggcgtcgccg gcgacgagga cgggctgctg gcgacccacc gcgcctacgg
     3121 acccgccggg gaag
//
LOCUS       DATGJT010000585         4894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1118079, whole genome shotgun sequence.
ACCESSION   DATGJT010000585 DATGJT010000000
VERSION     DATGJT010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4894
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118079"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..793)
                     /locus_tag="VKX24_10095"
     CDS             complement(218..793)
                     /locus_tag="VKX24_10095"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HLJ08881.1"
                     /translation="MHIPRPALPRLSLIDPADDAVGSDLSETLRKTIVRDGRPLNIFR
                     TLGHHPALLKRFNVLGGAFLAGGLLPAREREIVILRVGWNCRSVYEFGQHTVMGRDAG
                     LTEAEIAALTTVRALRPWSAHDQALIALADELCADDCVSDATFAALRDRWNDAELVEL
                     VALAGFYRMVSGILNALGVEPEPGLPGWPAP"
     gene            900..1448
                     /locus_tag="VKX24_10100"
     CDS             900..1448
                     /locus_tag="VKX24_10100"
                     /inference="COORDINATES: protein motif:HMM:TIGR03086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03086 family metal-binding protein"
                     /protein_id="HLJ08882.1"
                     /translation="MSDVLDRYRMLADDFGARVNAVPGDAWDNPSPCTEWTARDIVAH
                     LTNNARRVSALANGEEAPPPVAADDPVAAWAESRAMIEAVLADPDRSGASLPGPMGPM
                     PAETLIGRFMCTDILVHTWDLARATGLDETINAEAAEAAYEGLRPMDAMIRRPGFFGP
                     KVDCPDDADAQTRLLTFLGRQV"
     gene            1616..2371
                     /locus_tag="VKX24_10105"
     CDS             1616..2371
                     /locus_tag="VKX24_10105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020111556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HLJ08883.1"
                     /translation="MLSADYPILEHDPDPVGIIDPTMISARDVPEHAVLCFFGEVVAK
                     LAAEARESFKLRAEHGAHVAYELDYEGRRLLFFQPGVGAPLAAAFLEQAIARGCRRFA
                     VCGGAGALLPELVLGHVIVPTAAVRDEGTSYHYLAPAREVDVEPAAVGAATTVLSERG
                     IPFVTGKTWTTDGVYRETAARTARRRDEGCLAVEMEAAALVAVARFRGVPLVYLLYAG
                     DSLAGETWDHRHWQTHERREELFWLSAATCLRL"
     gene            complement(2411..2569)
                     /locus_tag="VKX24_10110"
     CDS             complement(2411..2569)
                     /locus_tag="VKX24_10110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08884.1"
                     /translation="MSDWDDDRDEGRAPICPYCGVTTLPAELSHVLDSDFVCDNADCD
                     AYGEVIRP"
     gene            complement(2722..>4894)
                     /locus_tag="VKX24_10115"
     CDS             complement(2722..>4894)
                     /locus_tag="VKX24_10115"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HLJ08885.1"
                     /translation="FRAFRRAAVASVVVSVVVAAVPPLREAVLYGATAGLLRAAQRWA
                     PPVPPFGDLASDTRIVAADGTLLATVAQENRRPLRLADVPLLVRRAVLAAEDDHFYRH
                     PGVDPLALARAAWRDARGGHQGGSTITQQLAKTNFTTGERTFDRKIDEALIAGELERR
                     STKDELLERYLNQVYFGEGAYGLDAAAHTFFGVDPAGLSTAQAATLAGKIRAPDRLDP
                     RNDPGAVLRRRDAVLANMARHRWLTVAELAGARAEPLILVPPRAPAGATLAPHFVELV
                     KREAQTIQALGGDAATRLQRLAVGGYRVETTLDPAVFEATTAAVHDQLGRAGDPRVAT
                     ATVEPGTGAIRSLFGGFDFDSAQFDEASLGARQPGSAFKPFVYLAALRAGIDPRSTFD
                     GTSDQRIKCYGDRPVHNAGNRSAGGRIDVDRALVQSVNVVFVALGCEVGVEPVRRAAA
                     DAGIPDGATEAQGAIFLGGLDRGVSALTMAGAYATFAAGGVYAEPYSIARIVAANGAV
                     IYQHEPIRRQAFRPEEVGVLNRTLQSVVTSGTGGAAAIGRPVAGKTGTTEDNGDAWFV
                     GFVPQLSTAVWVGYEPRRPMWQVHGRTVFGGSFPAAIFAAVMRRALDGVAPEPIPTTE
                     PEALDLHRLRQSGPWLRRRPRAPHPPADPPPSQAGDVDASQAQPQPAPDPPAPTAPPA
                     AGTPSPNDAAPSPPPAQADPAGPPTDHGRHPDPLLPAPPSP"
BASE COUNT          624 a         1706 c         1913 g          651 t
ORIGIN      
        1 ggtcgaccgt gtcgacgagg gtgagctcca cgtcggcgat gagatcggcg agttcctcct
       61 cggacatgcc ctcgatgtac ccgcccacaa tggggtggaa ccgcccgcag tgaagattta
      121 acaccgagcg tgggttaggc atctcgtcga cggtgaggca ggggatgtcg atcgccgtgc
      181 cggtggccgg gatgccagcc ggcgtcgccg acgaccgcta gggggccggc cagcccggca
      241 ggcccggctc gggttccacg cccagcgcgt tgaggatccc cgacaccatc cggtagaagc
      301 cggccagcgc cacgagctcc accagttcgg cgtcgttcca ccggtcccgg agggcggcga
      361 aggtggcgtc gctgacgcag tcgtcggcgc agagctcgtc ggccagggcg atcagcgcct
      421 ggtcgtgggc gctccagggg cggagggccc ggacggtggt gagggcggcg atctccgctt
      481 cggtgaggcc ggcgtcgcgg cccatgacgg tgtgctggcc gaactcgtag accgaccggc
      541 agttccagcc gacccggagg atgacgatct cccgctcccg ggcgggcagg agcccgccgg
      601 ccaggaacgc cccgccgagg acgttgaacc gtttgagcag cgcggggtgg tgtccgaggg
      661 tgcggaagat gttgagcggc cggccgtcgc gcacgatcgt cttgcggagc gtctcggaga
      721 ggtcggagcc caccgcgtcg tcggcggggt cgatcaacga caaccgcggc aaggccgggc
      781 gggggatgtg catgggcggc aatgtagtcg ccgcccggct cggggatcgg ggccgcccgg
      841 cccgacgtcg tcgctgtaca gtgcggctcc cgatccgccg ttcgacaggg ggccccgccg
      901 tgtccgacgt cctcgaccgc taccgcatgc tggccgacga tttcggcgcc cgggtcaacg
      961 ccgtacccgg ggacgcctgg gacaacccgt cgccgtgcac ggaatggacg gcccgcgaca
     1021 tcgtggccca cctcacgaac aacgcccggc gggtcagtgc cctggccaac ggcgaggaag
     1081 cgccgccgcc cgtcgccgcc gacgacccgg tcgccgcctg ggcggagtcc cgggcgatga
     1141 tcgaggccgt cctggccgac cccgaccgct ccggcgccag ccttcccggg ccgatgggcc
     1201 cgatgccggc cgagacgctg atcggccgct tcatgtgtac cgacatcctc gtccacacct
     1261 gggatctcgc ccgtgccacc ggcctcgacg agacgatcaa cgccgaagcc gccgaggccg
     1321 cctacgaggg gctgcggccg atggacgcca tgatccgccg gcccggcttc ttcggcccga
     1381 aggtcgactg ccccgacgac gccgacgccc agacccggct cctgaccttc ctcggccgcc
     1441 aggtctgagt cctctcggcg cctcgtcgtc gggcacctcg caggcgaagg ccggccggtc
     1501 gccacctggt gcggggcggc ccgtcggcct acggtgcggc acggatccga gcccatcagc
     1561 catccccgcc cggcattcag ccggggcggg aacgacgtgg aggtcgcgtc cccgcatgct
     1621 gtccgccgac tacccgatcc tggaacacga ccccgacccg gtcgggatca tcgatcccac
     1681 gatgatctcc gcccgggacg ttccggaaca cgccgtgctg tgcttcttcg gcgaggtcgt
     1741 cgccaagttg gcggcggagg cccgcgagag cttcaagctc cgggcggagc acggcgctca
     1801 cgtggcctac gagctcgact acgagggccg ccggctgctg ttcttccagc cgggagtggg
     1861 cgccccgttg gcggccgcct tcctcgagca ggccatcgcc cggggctgtc ggcgcttcgc
     1921 ggtgtgcggc ggcgccggcg cgctgctgcc cgagctcgtg ctcggccacg tgatcgtgcc
     1981 gacggcggcg gtgcgcgacg agggcacgtc gtatcactac ctggcgccgg cccgggaggt
     2041 ggacgtcgag ccggcggcgg tgggcgccgc caccaccgtg ctctccgaac ggggcatccc
     2101 cttcgtcacc ggcaagacct ggacgacgga cggggtctac cgtgagaccg cggcccgcac
     2161 cgcccgccgg cgcgacgaag gctgcctggc ggtggagatg gaagcggcgg cgctggtggc
     2221 cgtggcccgc ttccggggcg tcccgctcgt ctacctgctc tacgccggcg actcactggc
     2281 cggcgagacc tgggaccatc gccactggca gacccacgaa cgccgcgagg agctcttctg
     2341 gctgagcgcc gccacgtgcc tccggctctg agcgatggtg ccgcctcgcc ccggaaacgc
     2401 ttacgggtgg tcagggcctg atgacctcgc cgtaggcgtc gcagtcggcg ttgtcgcaca
     2461 cgaagtcgct gtcgaggacg tgcgacagct cggcggggag ggtcgtcacg ccgcagtacg
     2521 ggcagatcgg cgcccggccc tcgtcgcggt cgtcgtccca gtcgctcacc cgcccatcat
     2581 cgcaaagtcc gggcgccatg gcaccgaagc cctgacggag cagcggaggc gtcgctgatg
     2641 gcgccggatg ccggagcgcg gcgtcgtggg acaccgacgc gggcgacagt agctcgcccc
     2701 gcccggccgg gatgccggcg ttcagggcga cggtggggcg gggaggagcg ggtccgggtg
     2761 ccggccgtgg tcggtgggcg gcccggccgg gtcggcctgc gccggtgggg gagagggggc
     2821 ggcatcgttc ggggagggcg ttcccgccgc tggcggggcg gtcggtgcgg gcgggtcggg
     2881 ggccggttgg ggttgcgcct gcgaggcgtc gacgtcaccg gcctgtgacg ggggcggatc
     2941 ggcgggcggg tggggcgccc ggggccgccg ccggagccac ggcccgctct ggcggagccg
     3001 gtgcaggtcg agggcctccg gttcggtcgt ggggatgggc tcgggggcca cgccgtcgag
     3061 ggcccggcgc atgacggcgg cgaagatggc cgccgggaac gacccgccga acaccgtccg
     3121 tccgtggacc tgccacatgg ggcggcgggg ttcgtagccg acccacaccg cggtcgacag
     3181 ctgggggacg aagccgacga accaggcgtc gccgttgtcc tcggtggttc cggtcttgcc
     3241 cgccaccggc cggccgatgg ccgccgcccc gcccgtcccc gaggtgacga ccgattgcag
     3301 cgttcggttg aggacgccga cctcctcggg gcggaacgcc tggcggcgga tcggctcgtg
     3361 ttggtagatg acggcgccgt tggcggcgac gatccgggcg atggagtacg gctcggcgta
     3421 gacgccgccg gcggcgaagg tggcgtaggc gccggccatg gtcagggcgc tgacgccccg
     3481 gtcgaggccc ccgaggaaaa tggcgccctg ggcctcggtc gccccgtcgg ggatgccggc
     3541 gtcagccgcc gcccgccgca ccggctcgac gccgacctcg catccgaggg cgacgaagac
     3601 cacgttgacc gactgcacca gcgcccggtc gacgtcgatg cgtcctccgg cgctgcggtt
     3661 cccggcgttg tggacgggcc gatcgccgta gcacttgatc ctctggtccg aggtcccgtc
     3721 gaaggtgctg cggggatcga tgccggcccg cagggcggcg aggtagacga acggcttgaa
     3781 cgccgaaccg ggttggcggg ccccgagact ggcttcgtcg aactgggcgg agtcgaagtc
     3841 gaacccaccg aagaggctgc ggatggcgcc ggtccccggc tcgacggtgg cggtggcgac
     3901 ccgggggtcg ccggcccggc cgagctggtc gtggaccgcg gcggtggtgg cctcgaagac
     3961 ggcggggtcg agggtggtct ccacccggta gccgccgacg gccaagcgtt ggagccgggt
     4021 ggcggcgtcc ccgccgagcg cctggatcgt ctgcgcttcc cgtttcacca gctcgacgaa
     4081 atggggggcc agggtggcgc cggccggtgc ccggggcggc accaggatga gcggctcggc
     4141 ccgggcgccg gccagttcgg cgacggtgag ccagcggtgc cgggccatgt tggccagcac
     4201 ggcgtcgcgg cggcggagga cggcgccggg gtcgtttcgg gggtcgagac ggtccggcgc
     4261 ccggatcttg cccgccagcg tggcggcctg cgccgttgac agtccggccg ggtcaacgcc
     4321 gaagaaggtg tgggccgcgg cgtcgaggcc gtaggcgcct tcgccgaagt agacctggtt
     4381 caggtagcgc tcgagcagct cgtccttggt ggagcgccgc tcgagctcgc cggcgatgag
     4441 cgcctcgtcg atcttgcggt cgaaggtccg ctctccggtg gtgaagttcg tcttggccaa
     4501 ctgctgggtg atcgtgctgc ccccctggtg gccgccccgg gcgtcccgcc acgccgcccg
     4561 ggccagcgcc agcgggtcga caccgggatg gcggtagaag tggtcgtcct cggcggccag
     4621 tacggcccgg cggacgagga gagggacgtc ggccaggcgc agcggccggc ggttctcctg
     4681 ggccacggtg gcgaggaggg tcccgtcggc ggccacgatc ctggtgtcgg aggccaggtc
     4741 gccgaagggc gggacgggcg gcgcccaccg ctgcgcggcc cgcagcaggc cggcggtggc
     4801 gccgtagagg acggcctccc gcagcggggg caccgcggcc accaccacac tgacgacgac
     4861 ggaggcgacg gcggcccggc ggaacgcccg gaag
//
LOCUS       DATGJT010000586         5324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_701775, whole genome shotgun sequence.
ACCESSION   DATGJT010000586 DATGJT010000000
VERSION     DATGJT010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5324
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_701775"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..1087
                     /locus_tag="VKX24_10120"
     CDS             155..1087
                     /locus_tag="VKX24_10120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012096963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HLJ08886.1"
                     /translation="MTLAVVGSVAFDAVQTPFGERERMLGGSATHFSLAASFYTDVRI
                     VGVVGDDFGPAEVAVLEARGVDTEDLERVAGRTFFWRGRYDYDVNVAHTLDTQLNVFA
                     EFQPKPSPASRDAETLFLGNIQPGLQAAVRRECTGATLAGIDSMKLWIDTQREALLEA
                     IATVDAVLLNDAEVRSLTREPNTVVAARKLSELGPRFVVVKRGEYGAALFSEHGFFAI
                     PGYPLETVVDPTGAGDSFAGGFFGYLDGHGQDLSDGSLRRAMAVGSVMASFNVEGFGT
                     ERVAALTEAEIRERFQAFRAMMNVAELELDADLR"
     gene            complement(1139..1867)
                     /locus_tag="VKX24_10125"
     CDS             complement(1139..1867)
                     /locus_tag="VKX24_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08887.1"
                     /translation="MATIPVVLELGTRRSFASAVDWPGWCRGAKGEDGALEALALAAD
                     RYRPVAALAGFSLPEGAGDAVPFEVVERVPGNATTEFGAPGVEAEVDRAPLSRVAAAR
                     MASLVGAAWSYLDAVAAKAPEELRKGPRGGGRNRDKILAHELDAAQMYVRKLGLRPAD
                     AVLGDPGSVAGFRAAVLEALGQPWSGEPPAEAPGENPKPDGKAKPGGKAKPGGKAWPP
                     RYAARRFAWHTLDHAWEIEDRSTV"
     gene            complement(1867..4218)
                     /locus_tag="VKX24_10130"
     CDS             complement(1867..4218)
                     /locus_tag="VKX24_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012853146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 65 protein"
                     /protein_id="HLJ08888.1"
                     /translation="MIAQPHFPAEPWRLRETEFDLALLGQSESIFALSNGHIGLRANL
                     EEGEPHAVPGTYLNSFFEVRPLPYAEAGFGFPEAGQTVVNVTDGKVIRLLVDDEPFDV
                     RYGRLHSHERCLDFRTGQLTRRVDWESPTGQRVRITTHRLVSFTQRSVVAIWYEVEPV
                     EGSADIVVQSELVANEPLPPGVHDPRTSAVLESPLVSDLNSHDELRAVLVHHTRLSGL
                     FVAAAMDHEVEGPENIDLQAECSDDLGRLTVATEVHAGHPLRIVKYLSYGWSSHRSVP
                     ALRDQVGAGIASARRRGWAGLAAEQEKFLKGFWDRADVELEGDAELQQAVRFGLFHVM
                     QAGARGEQRPIPAKGLTGPGYDGHTFWDAETFVLRCLSYTAPQAVADALKWRQSTIEL
                     AVERAKVLGLAGAAFPWRTIRGEECSAYWPAGTAAFHVNADIADAVIRYVAATGDVDF
                     DRETGLPLLVETARLWRSVGHHDLEGRFRIDGVTGPDEYSALSDNNLYTNLMAQANLT
                     GAADAVERHPGHAAKLGVNSEEAASWRDAAKAMFIPFDEVLGVHPQSEGFTHYQHWDF
                     AATPPENYPLLLHYPYFDLYRKQVVKQADLVLALELRGDAFTAEEKARDFEYCEPMTV
                     RDSSLSACTQAVMAAEVGHLDLAYDYLGEAGLMDLHDLEHNVADGVHMASLAGVWIAS
                     VCGFGGMRDHHGVLSFAPRLPHALDRLVFRLTFRGSLLKVEVSGDRAIYTLVSGPPLT
                     TTHHGHPLTVAPGPPVTLGIPAAPARSRPEQPPGRAPAVRMRP"
     gene            complement(4215..4958)
                     /locus_tag="VKX24_10135"
     CDS             complement(4215..4958)
                     /locus_tag="VKX24_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016467988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HLJ08889.1"
                     /translation="MKLGLPDRVTACLFDLDGVLTQTAVVHEVAWKQMFDSYLAERAG
                     RAGQAFAPFTEADYDAYVDGKPRSDGVRSFLASRGIELPDGSHDDPPDAETIAGLGNR
                     KNELVLRLIHDQGVAAYEGSVRYVKAVIQAGLARAVVSSSANCHDVLAAAGIAQFFDV
                     VVDGITVEKEHLRGKPAPDTFLHAAAELGVEPAQAAVFEDALAGVEAGRAGGFGCVVG
                     VDRVGQAAALAAHGADVVVKDLADLLPAS"
BASE COUNT          774 a         1905 c         1879 g          766 t
ORIGIN      
        1 agggggtctc cctcaccctg aacctcgtag tacatcgtga tgccattggc ctgcacagtg
       61 ggcatgggcg cacccctcct ggtcggcaat cggaccctcc catgctgcca ccgtcgagca
      121 cccgcaggcg agtcatggga ctatggcgcc cgccatgacc ctcgccgtag tcggttccgt
      181 cgccttcgac gccgtccaaa ccccgttcgg ggaacgtgag cggatgctcg gcgggtcggc
      241 cacccacttc tcgctggcgg ccagcttcta caccgacgtg cggatcgtcg gcgtggtcgg
      301 cgacgacttc ggcccggccg aggtggcggt gctggaggcc cggggggtcg acaccgagga
      361 cctggagcgg gtcgctggaa ggaccttctt ctggcggggc cgctacgact acgacgtcaa
      421 cgtcgcccac accctcgaca cccagctgaa cgtcttcgcc gagttccagc ccaagccctc
      481 ccctgcctcc cgggacgccg agacgctgtt cctcggcaac atccagccgg ggctccaggc
      541 ggcggtgcgc cgggagtgca ccggggcgac cctggccggg atcgactcga tgaagctgtg
      601 gatcgacacc cagcgcgagg cgctgctcga ggcgatcgcc acggtcgacg ccgtgctgct
      661 caacgacgcc gaggtccggt cgctgacccg ggagccgaac accgtggtcg cggcccgcaa
      721 gctgtccgag ctcggccccc ggttcgtggt cgtcaagcgc ggtgagtacg gagcggcgct
      781 gttcagcgag cacgggttct tcgccatccc cggctacccg ctcgagacgg tcgtcgaccc
      841 gaccggggcc ggggacagct tcgccggcgg cttcttcggc tacctcgacg gccacggcca
      901 ggacctcagc gacgggtcgc tccgccgggc gatggcggtc ggatcggtga tggcgtcgtt
      961 caacgtcgag ggcttcggca ccgagcgggt cgctgccctg accgaggcgg agatccggga
     1021 gcgcttccag gcgttccggg cgatgatgaa cgtcgccgag ctggagctgg acgccgacct
     1081 gcgctgaccc cggctccacg gccgacggcc gctactccgg ctccacggcc gacgaccgct
     1141 acaccgtcga gcggtcctcg atctcccagg cgtgatcgag cgtgtgccag gcgaagcgcc
     1201 gagcggcgta gcggggcggc caggctttcc cacccggctt cgccttccca cccggcttcg
     1261 ccttcccatc cggcttcgga ttctcacccg gggcctcggc gggcggctcg ccggaccatg
     1321 gctggccgag ggcttcgagc accgccgccc ggaagcccgc gacgctcccg gggtccccga
     1381 gcaccgcgtc cgcaggccgc agccccagct tgcggacgta catctgcgcc gcgtcgagtt
     1441 cgtgggcaag gatcttgtcc cggttgcggc ccccgccccg gggtcccttg cgcagctcct
     1501 ccggagcctt ggccgccaca gcatccaggt agctccaggc ggcgccgacc agcgacgcca
     1561 tccgggcagc cgccacgcgg gacagtggtg cccggtcgac ctcggcctcg actcccgggg
     1621 ccccgaactc ggtcgtggcg ttgcccggga cccgctcaac gacctcgaag ggaacggcat
     1681 cgccggcacc ctccgggagg ctgaaccccg ccagcgccgc caccgggcgg tagcgatcgg
     1741 cagccaaggc gagtgcctcc agcgccccgt cctcgccctt ggcgccgcgg caccagcccg
     1801 gccaatcgac cgccgaggca aaactcctcc tggtcccgag ctccagcacg acgggaatcg
     1861 tggccatcag ggtcgcatcc ggacggcggg cgcccggccg ggcggctgct ccgggcgtga
     1921 ccgcgccggc gccgccggga tgcccagcgt caccgggggg ccgggggcga cggtcagcgg
     1981 gtgaccgtgg tgggtcgtcg tgagcggcgg tccggagacg agggtgtaga tggcccggtc
     2041 cccggacacc tcaaccttga gcagggaccc gcggaaggtc aaccggaaca ccagccggtc
     2101 gagcgcgtgc ggcagccggg gggcgaacga cagcacaccg tggtgatcgc gcatcccgcc
     2161 gaagccgcat accgaggcaa tccacacccc ggccagcgag gccatgtgga cgccgtcggc
     2221 gacgttgtgc tccaggtcgt gcaggtccat cagcccggcc tcgccgaggt agtcgtaggc
     2281 caggtccagg tgcccgacct cggccgccat cacggcttgc gtgcacgccg acagcgagga
     2341 gtcccggacg gtcatcggct cgcagtactc gaagtcccgc gccttctcct cggcggtgaa
     2401 ggcgtcgccg cgcagctcca gggccagcac caggtcggcc tgcttcacca cctgcttgcg
     2461 gtacagatcg aagtacgggt agtggagcag cagcgggtag ttctccggcg gcgtggcggc
     2521 gaagtcccag tgctggtaat gggtgaagcc ctcggactgg gggtgaacgc ccaggacctc
     2581 gtcgaacggg atgaacatcg ccttggcggc atcccgccac gaggccgcct cctcggagtt
     2641 gacccccagc ttggcggcgt ggccggggtg gcgctccacc gcgtcggcgg ccccggtcag
     2701 gttcgcctgg gccatcaggt tcgtgtagag gttgttgtcg ctgagagcgc tgtactcgtc
     2761 cgggccggtg accccgtcga tgcggaaccg accctcgagg tcgtggtgac cgaccgaccg
     2821 ccacagccgg gcggtctcga ccagcagcgg caggccggtc tcgcggtcga agtcgacgtc
     2881 ccccgtcgcc gcgacgtagc ggatcacggc gtcggcgatg tcggcgttga cgtggaaggc
     2941 ggccgtgccg gcgggccagt aggcggagca ttcctcgccc cggatcgtgc gccacgggaa
     3001 cgccgcgccg gccaggccga gcaccttcgc ccgctccacg gccagctcga tcgtcgactg
     3061 gcgccacttg agggcgtcgg cgactgcctg cggcgcggtg tagctcaggc accgcaacac
     3121 gaacgtctcg gcatcccaga aggtgtggcc gtcgtagccg ggcccggtca aacccttggc
     3181 cgggatcggc cgctgctcgc cccgggcacc ggcctgcatg acgtggaaca ggccgaagcg
     3241 gaccgcctgc tggagctcgg cgtcgccctc gagctcgacg tcggcccgat cccagaaacc
     3301 cttgaggaac ttctcctgct cggcggcgag gccggcccag ccgcgacggc gggcggaagc
     3361 gattcccgcc ccgacctggt ccctcagagc gggcaccgag cggtggcttg accacccgta
     3421 ggacaggtac ttgacgatgc gcagagggtg gcccgcatgc acctcggtcg ccaccgtcag
     3481 ccggccgaga tcgtccgagc actcggcctg caggtcgatg ttctctggcc cctcgacctc
     3541 gtgatccatc gccgcggcga cgaacagccc gctcagccgg gtgtggtgca ccagcaccgc
     3601 ccgcagctcg tcgtggctgt tgaggtccga gaccagcggc gactcgagca cggcagaggt
     3661 gcgcggatcg tgcaccccgg gagggagagg ctcgttggcg accagctcgg actgcacgac
     3721 gatgtcggcg ctgccttcga ccggctccac ctcgtaccag atcgccacca ccgagcgctg
     3781 ggtgaaggag accagccggt gcgtcgtgat gcggacccgc tggccggtcg gcgactccca
     3841 gtccacccgc cgggtcagct gcccggtgcg gaagtcgagg cagcgctcgt ggctgtgcag
     3901 gcgcccgtag cggacgtcga acggctcgtc gtcgaccaga agccggatca ccttgccgtc
     3961 ggtgacgttg acgacggtct gcccggcctc ggggaagccg aagccggcct cggcgtaggg
     4021 cagtgggcgg acctcgaaga acgagttgag gtaggtgccg gggacggcgt ggggctcgcc
     4081 ctcctccagg ttcgcccgga gcccgatgtg gccgttggac agggcgaaga tcgactccga
     4141 ctgcccgagg agggcgaggt cgaactcagt ctcccgcagc cgccacggct cggcggggaa
     4201 gtgcggctgg gcgatcacga ggctgggaga aggtcggcca ggtccttgac gaccacatcg
     4261 gcgccgtggg cggccagggc tgccgcctga cccacccggt cgacccccac gacgcatccg
     4321 aaacctccgg cccggccggc ctcgaccccg gcgagggcat cctcgaagac ggccgcctgc
     4381 gccggctcga cccccagctc ggcggcggcg tggaggaagg tgtccggcgc cggcttgccc
     4441 cggaggtgct ccttctcaac ggtgatgccg tcgacgacga catcgaagaa ctgggcgatg
     4501 ccggcggccg ccagcacgtc gtggcaattg gcgctcgacg acaccaccgc acgggccaga
     4561 ccggcctgga tcaccgcctt gacgtagcgc accgacccct cgtacgccgc caccccctga
     4621 tcgtggatca gccgcagcac cagctcgttc ttgcggttgc ccaggccggc gatcgtctcg
     4681 gcgtcgggag ggtcgtcgtg gctgccgtca ggaagctcga tcccccggga tgcgaggaat
     4741 gagcggacgc cgtcagatcg gggcttcccg tcgacgtagg cgtcgtaatc ggcttcggtg
     4801 aacggggcga acgcctgccc ggcgcggccc gcccgctcgg ccaggtagct gtcgaacatc
     4861 tgcttccagg ccacttcgtg gacgacggcg gtctgggtga ggaccccatc gaggtcgaac
     4921 aggcaggcgg tcacccggtc ggggaggccc agcttcatgt cggcatccta cccacgtcgt
     4981 cccccgcagc cagagcctgc cttcccgggg gtgactcggt tggtgcggtg gactttcggt
     5041 gtcttcaggg tgtcgcgtaa ccaaggggcg agggccgagc cctttcaagc aggctcatag
     5101 gggttctgtg gatgatccgg tgcgatgttg gcgcgttttc atccacaaaa ccgcccatcc
     5161 tccgctgcgg cttcgccggg ttcggcctcg ggcgcgccaa gaatgcgaca gtcggcgagc
     5221 gcgacgacat gggaatcggg gcctgcgaaa ccccccggcg gcgctaagcc cccgccgcgt
     5281 tggccacgtc ctgggggtag gtgcgcagcg cccggaacag caag
//
LOCUS       DATGJT010000587         2319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1012323, whole genome shotgun sequence.
ACCESSION   DATGJT010000587 DATGJT010000000
VERSION     DATGJT010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1012323"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="VKX24_10140"
     CDS             complement(<1..235)
                     /locus_tag="VKX24_10140"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HLJ08890.1"
                     /translation="MIHVQISTHIDRPVEDVFAFVDDLAHLPEWIDVIADSVASEPAT
                     RIGTRVTNRIDLLGRHFRNVLEVIEREPNRTITL"
     gene            complement(381..1289)
                     /gene="sigI"
                     /locus_tag="VKX24_10145"
     CDS             complement(381..1289)
                     /gene="sigI"
                     /locus_tag="VKX24_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014213928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigI"
                     /protein_id="HLJ08891.1"
                     /translation="MDGDRQEIVAAIWREHRPFLVDLAFRMLGNIGDAEDVVQDAFTR
                     LLRVDPAGIDDRRAWLVVVVTRRCLDILRSARVRRETRPDPGADPFGDAPAAGPVPDP
                     ADRITLDDSVRLALYVVLEQLGPAERAVFVLHEVFRYPFESIASIVGRPAGNCRKAAS
                     RARRRIEAAAGPARFAVAPDEHRQLAERFIAACADGDLDALTRLLSTDVVGKVDLGAG
                     APPAPVLSGRHPVARNLLRHLGGAAGVVLVSQPVNGWPGALAFKDGRLHAVLIMEVED
                     GLVADIHAIRNPQALAGVGRLVEARR"
     gene            complement(1420..1605)
                     /locus_tag="VKX24_10150"
     CDS             complement(1420..1605)
                     /locus_tag="VKX24_10150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08892.1"
                     /translation="MGVRRVVRRWMLLGVAVPAAAALADRMGRRLEAQRGRDVWSRGL
                     RGGAAGLRRLQPGRRAR"
     gene            complement(1725..2231)
                     /locus_tag="VKX24_10155"
     CDS             complement(1725..2231)
                     /locus_tag="VKX24_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013474708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF664 domain-containing protein"
                     /protein_id="HLJ08893.1"
                     /translation="MEVGDILTELFGRIPGIVRDAVGGLAPEDLVARPASHTNPIGWL
                     VWHLTRVQDHHLAELIGEEQLWVSGDWAGRFGLEPDPKNTGYGHSDTDVEAVRPESAE
                     VLVAYHRAVAERSAVYVAGLRPADLDRIVDRSWDPPVTLGARLVSVAVDDLQHAGQAA
                     YVRGLLGR"
BASE COUNT          303 a          832 c          901 g          283 t
ORIGIN      
        1 gcagggtgat ggtgcggttc ggttcccgct cgatgacctc gagcacgttg cggaaatgcc
       61 ggccgaggag gtcgatgcgg ttggtcaccc gggtgccgat ccgggtggcc ggttcggagg
      121 cgacggagtc ggcgatgacg tcgatccatt ccggcaggtg ggcgaggtcg tcgacaaagg
      181 cgaagacgtc ctcgacgggc cggtcgatgt gggtgctgat ctggacgtgg atcacgagcg
      241 ttctcctttt cgaagcagcg gcgggtgtct cgagccgacg gcggcggggg ggaagacccg
      301 gaccgagggc gcggtcacga cggggccgag ccggggactc cctggtcggg ggcggtggag
      361 gcccgttcag gcggcggcgg tcaccggcgg gcctcgacca gccgtccgac gccggccagc
      421 gcctgcgggt tgcggatggc gtggatgtcg gcgacgaggc cgtcctcgac ctccatgatg
      481 agcacggcgt ggagccgccc gtccttgaac gccagggcgc ccggccagcc gttgacgggc
      541 tgggacacca gaaccacccc ggcggcgccg cccaggtgcc ggagcaggtt gcgggccacc
      601 gggtggcgtc cggacagcac cggggccggc ggggcgccgg caccgaggtc gaccttgccg
      661 acgacgtcgg tgctcagcag gcgcgtgagg gcgtcgaggt ccccgtcggc gcaggcggcg
      721 atgaaccgct cggccagttg acggtgctcg tcgggggcca cggcgaagcg ggcggggccg
      781 gcggcggcct cgatccggcg gcgggcccgg ctggccgcct tgcggcagtt cccggccggg
      841 cggcccacga tggaggcgat cgactcgaac gggtagcgga acacctcgtg cagcacgaac
      901 accgcccgtt cggccgggcc gagctgctcg agcacgacgt agagcgccag gcggacgctg
      961 tcgtcgaggg tgatgcggtc ggccggatcg gggacgggac cggccgccgg cgcgtcgccg
     1021 aacgggtcgg ccccgggatc ggggcgggtc tcccggcgga cccgggccga ccgcaggatg
     1081 tcgaggcagc ggcgggtcac cacgaccacc agccaggccc gccggtcgtc gatcccggcc
     1141 gggtcgaccc gcagcaggcg ggtgaaggcg tcctggacga cgtcctcggc gtcgccgatg
     1201 ttgccgagca tgcggaaggc caggtcgacc aggaacgggc ggtgctcccg ccagatggcg
     1261 gcaacgatct cctgcctgtc gccgtccatc cgacctcctc cggcctcggt tgtcatgctc
     1321 ctaggacggg acaggtcctc ggaatgtgac cgggggacgg cggcccggcg tggccggcct
     1381 cgtggtcgcg gtccgcccgc ctgccctcgg agcggcgcct cagcgggctc gccggccggg
     1441 ctggagacgg cgcagcccgg cggcgccgcc ccgcaggccc cgggaccaca cgtcccggcc
     1501 ccgttgggcc tcgagccgcc ggcccatccg gtcggccagc gccgcggcgg ccgggaccgc
     1561 cacgccgagc agcatccagc ggcgcacgac ccgtctcacc cccacggcaa ccgccggaga
     1621 ggatgcgggc cgccccgggc ggcaccccac gggtcggagc acacgatcgg cgtcatcacc
     1681 tgcaccgttc ccgggcccgc cgccgcggaa accgccgccg gacgtcagcg acccaggagc
     1741 ccccggacgt aggccgcctg accggcgtgc tggaggtcgt cgacggccac gctgaccagc
     1801 cgggccccga gcgtcaccgg cgggtcccag gaccggtcga cgatgcggtc gaggtccgcc
     1861 ggacgcaggc cggcgacgta gacggcgctg cgctcggcca ccgcccggtg gtaggcgacg
     1921 agcacctcgg cggattccgg tcggaccgcc tccacgtcgg tgtccgagtg gccgtagccg
     1981 gtgttcttcg ggtcgggttc gagcccgaac cgtccggccc agtcgcccga cacccacagc
     2041 tgctcctcgc cgatcagctc ggcgaggtgg tggtcctgga cccgggtgag atgccacacc
     2101 agccagccga tcgggttggt gtgcgacgcc ggccgcgcca cgaggtcctc gggagcgagg
     2161 ccgccgacgg cgtcccggac gatgcccggg atgcggccga agagctccgt caggatgtcg
     2221 ccgacctcca cgtcagcctc ctctcgattg cgcgatctcc gccttctacc caccgccggc
     2281 cccgggcacc ggttagcgca ggcccgggct gcggtaagt
//
LOCUS       DATGJT010000588         2047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_287996, whole genome shotgun sequence.
ACCESSION   DATGJT010000588 DATGJT010000000
VERSION     DATGJT010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287996"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VKX24_10160"
     CDS             <1..241
                     /locus_tag="VKX24_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08894.1"
                     /translation="DATGRRAEVERALVRLADMPADRSGETLEAGAPEAEAVGEALFA
                     LADLARRVGVDPETALRAYAGRFRGDLEAGEQRTL"
     gene            281..589
                     /locus_tag="VKX24_10165"
     CDS             281..589
                     /locus_tag="VKX24_10165"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLJ08895.1"
                     /translation="MLREARTRRGWSQSQLARRSGVSQSVISAYESGAREPSVAALRR
                     LGRAMDLDLAFVAARTPRGPDPSVMAKQLEDVLGLVDAMRLQPRARPPLRYPVLSGTS
                     "
     gene            607..1188
                     /locus_tag="VKX24_10170"
     CDS             607..1188
                     /locus_tag="VKX24_10170"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HLJ08896.1"
                     /translation="MLALHRALADHGIPHALGGAIALAYGVNQARATTDVDLNIFLST
                     DHADEVLGAMPPGVRVRTSDATALRRDAQVRLGWDDNPVDLFLSTVAFHDVAATRIRE
                     VPFEKSTIPVLSPTDLAVCKALYGRGRDWVDIEAMRDAGTIDAPEALRWVAQMLGSDH
                     PHYQRLRDVVSAPPVRPDEVDRLPHALRPRGRR"
     gene            1283..>2047
                     /gene="eno"
                     /locus_tag="VKX24_10175"
     CDS             1283..>2047
                     /gene="eno"
                     /locus_tag="VKX24_10175"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012936695.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HLJ08897.1"
                     /translation="MSAIEQVRAREVLDSRGNPTVEVEVLLESGAAGRAIVPSGASTG
                     SHEATEWRDGGERYGGKGVLGAVEHVNGEIADVLEGFEATDQRSVDFALVDLDGTPTK
                     GRLGANAVLGVSLAVAKAAAEESALPLFRYVGGSNAHVLPVPLMNVVNGGAHADNSVD
                     LQEFMVCPVGAASYSEGLRWGVETYHALQKVLRSRRLSTTVGDEGGFAPDLPSNETAV
                     QVLVEAIEAAGLTPGGDVAIALDPATTELWKDGAYEL"
BASE COUNT          305 a          721 c          723 g          298 t
ORIGIN      
        1 ggacgccacc gggcgccgtg ccgaggtcga gcgggcgctg gtgcgcctgg cggacatgcc
       61 ggccgaccgc tccggcgaga ccctcgaggc gggcgccccg gaggccgagg ccgtggggga
      121 ggcgctcttc gcgctggccg acctggcgcg ccgggtgggt gtcgatcccg agacggccct
      181 gcgggcctac gccggccggt tccgagggga cctcgaagcc ggcgaacagc ggacgctata
      241 gcggatccgc tatagtctga gcatgaccca aaccgggcag atgcttcgtg aagcacggac
      301 gcggcgaggc tggtcgcagt cgcaactggc ccgacgaagc ggggtatcgc agtcggtcat
      361 ctccgcctac gagtccgggg cgcgagagcc gtcggtggcg gcgctgcggc gacttggccg
      421 ggcgatggat ctcgacctcg ccttcgttgc ggcccgaacc ccacgcggcc cggatccctc
      481 ggtcatggcc aagcagctcg aggacgtcct cggcttggtc gacgcaatgc ggctgcagcc
      541 ccgagcccgg ccgcccctgc gctaccccgt gctttcaggt acttcgtgac aacgctcggc
      601 gacaaggtgc tggccctgca ccgggctttg gccgaccacg gcatcccgca cgcgctcgga
      661 ggcgccatcg ccctggctta cggcgtcaac caagcgcggg cgacgacaga cgtcgacctc
      721 aacatcttcc tttcgaccga ccacgccgac gaggtcctcg gagcaatgcc gcccggtgta
      781 cgcgtccgca cctcggacgc cacggccctg cgccgcgacg cacaggtgag gctgggctgg
      841 gacgacaatc cggtggacct gttcttgtcc acggtcgcct tccacgatgt tgcggcgacg
      901 aggatccgtg aagtcccctt cgagaagagc accatccccg tgctctcgcc gacggacctc
      961 gctgtgtgca aggcgctgta tggccggggg agggactggg tggacatcga ggcgatgcgt
     1021 gacgccggca cgatcgacgc gcctgaggcg ctccgatggg tcgcccagat gcttggaagc
     1081 gaccatcctc actaccagcg gctgcgcgac gtcgtcagcg ctcctccggt ccggccggac
     1141 gaagtcgacc gcctcccaca tgcgcttcgt ccacggggcc ggcgatgatc tcgcccgggc
     1201 tacggctcga cccggggatt cctgggccct ggctaccaca gggagtaact ttgacaacac
     1261 tcaccacagg agcaacacgc tcatgagcgc catcgagcag gtccgggcgc gggaggtcct
     1321 cgactcccgc ggcaacccca ctgtcgaagt cgaggtcctg ctcgagtccg gcgccgccgg
     1381 gcgggccatc gtgccctcgg gcgcctccac gggcagccac gaggccaccg aatggcgtga
     1441 cgggggcgag cgctacgggg gcaagggagt cctcggcgcg gtggagcacg tgaacggcga
     1501 gatcgccgac gtgctcgagg gcttcgaggc cacggaccag cgcagcgtcg acttcgccct
     1561 ggtcgacctc gacggcacgc cgaccaaggg ccggctcggg gcgaatgccg tcttgggcgt
     1621 ctcgctggcg gtggcgaagg cggccgccga ggagtcggcg ctcccgttgt tccgctacgt
     1681 gggtgggtcc aacgcccacg tgctgcctgt gccgctcatg aacgtcgtga acggcggcgc
     1741 ccacgccgac aattcggtcg atctccagga gttcatggtc tgccccgtcg gtgccgcgtc
     1801 gtactccgag ggcctgcgct ggggcgtgga gacctatcac gccctgcaga aggtcctgcg
     1861 ctcgcgccgg ctgtccacca cggtgggcga cgaagggggc ttcgcgcccg acctcccctc
     1921 gaacgagacc gctgtgcagg tgctcgtcga agccatcgag gccgccgggc tgacgcccgg
     1981 cggcgatgtc gccatagctc tcgacccggc caccaccgag ctgtggaagg acggcgccta
     2041 cgagctg
//
LOCUS       DATGJT010000589         2072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1528705, whole genome shotgun sequence.
ACCESSION   DATGJT010000589 DATGJT010000000
VERSION     DATGJT010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1528705"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VKX24_10180"
     CDS             <1..329
                     /locus_tag="VKX24_10180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08898.1"
                     /translation="LAILDEPAAGLAREDRRDLSERIGMVCDEMGIAVLVTGQDFPAI
                     TNLADFVYVLDGGSVVGKGEPADVRADTRVQAAFLRGADPPPPTPPPASPGGGPEGPA
                     GPGDLN"
     gene            329..1066
                     /locus_tag="VKX24_10185"
     CDS             329..1066
                     /locus_tag="VKX24_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012931918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ08899.1"
                     /translation="MLAVTGLDVGYAGAPVLRGIEFEVGDGEVVALLGPNGAGKTTLA
                     RALTGVLRPRAGTITFDGRRLDRLSPKAIVKAGVVGVPQGRRIFSGLTVLDNLRVGAH
                     TRGRQAASDVDWALDLFPGLRAQAYRPAAALPAGEQQVLALARALVSRPKLLVVDELS
                     AGVSPALACQLFDVLRGLSLAGVSLLVVDQFVNLTLGLADRAIVIENSRVCLCAESGN
                     LTLTDLSWQSTQPGGGDSASRSKGAPQ"
     gene            1063..>2072
                     /locus_tag="VKX24_10190"
     CDS             1063..>2072
                     /locus_tag="VKX24_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08900.1"
                     /translation="MKLGTLPRGLVVAAVAAVTVVPLAASTASAAPAAPAAYSVYSSA
                     QPLVWADSSSVPVGDVHVPAVVGKTNPLGVASAYAALSNPDGSGKTMSGQDISGLQCA
                     GYDACKDPFLMIARAGHEGDAAGHSEQSASFTGKDGKFPGNIHAVTDCPGACASQPVH
                     STGSAAGPAGALPGYVSVGSSSATQDLSMDDKGRLVSTATSELDNVSIGPKNEVHFSR
                     LVTTAQALGAGAENSKDGRADIRIDNFYILDNPVELTRAGLRLANAGPSDQEAYDGAK
                     VLLKKLRDRGIILNLPNFDLQVVKAPDHVTVDVPALSVIFEQSAGPVQAAALSDPVQL
                     GHS"
BASE COUNT          285 a          766 c          728 g          293 t
ORIGIN      
        1 ggctggccat cctcgacgag cccgccgccg gtctggcccg agaggaccgg cgtgacctgt
       61 cggaacggat cggcatggtc tgcgacgaga tgggcatcgc cgtcctcgtg accggccagg
      121 acttcccggc catcaccaac ctggcggact tcgtctacgt gctcgacggc gggtcggtcg
      181 tcgggaaggg cgagcccgcc gacgtccggg ccgacacccg ggtgcaggcg gcgttcctcc
      241 ggggtgcgga tccgccgcct ccgacgccgc ccccggcgtc ccccggcggc ggcccggagg
      301 ggccggcggg gccgggggac ctgaactgat gctggccgtc acgggtctcg acgtggggta
      361 cgccggggcg cccgtcctcc gggggatcga gttcgaggtc ggcgacggcg aggtcgtggc
      421 gctcctcggg cccaatgggg ccgggaagac gacgctggcc cgggccctca ccggcgtcct
      481 ccggccgagg gcgggaacca tcacgttcga cgggcgacgg ctcgatcggc tatcgcccaa
      541 agcgatcgtg aaggcgggag tggtcggcgt tccccagggc cgccggatct tttccggcct
      601 caccgtcctc gacaacctgc gggtcggggc ccacacccgg gggcgccagg cggcgtccga
      661 cgtggactgg gccctcgatc tcttccccgg cctccgggcc caggcttacc ggccggcggc
      721 ggcccttccg gccggggagc agcaggtgct ggccctggcc cgggccctgg tcagccggcc
      781 gaaactgctc gtcgtcgacg agctctcggc cggggtttcg cccgccctgg cctgccagct
      841 cttcgacgtg ctgcgggggt tgagcctggc cggggtgtcg ctgctggtcg ttgaccagtt
      901 cgtcaacctg acactcggcc ttgccgaccg ggcgattgtc atcgaaaata gtcgggtatg
      961 tctgtgcgca gagtcaggta acctgacgct gacggacctt tcgtggcagt cgacgcagcc
     1021 cggcggaggc gactccgcca gtcgaagcaa aggagcaccc caatgaagct gggcaccctc
     1081 ccccggggcc tggtcgtggc ggcggtggca gccgtcacgg tggtaccgct cgcggcctcg
     1141 accgcgtcgg cggcgccggc cgctcccgct gcctacagcg tgtacagcag tgcccagccg
     1201 ctggtctggg ccgactcctc gagcgttccc gtcggcgacg tccacgtccc ggcggtggtg
     1261 ggcaagacca acccgctcgg agtcgccagc gcctacgccg ccctgagcaa ccccgacggc
     1321 tcgggcaaga ccatgtcggg ccaggacatc agcggcctgc agtgcgccgg ctatgacgcc
     1381 tgcaaggatc cgttcctgat gatcgcccgg gcgggccacg agggtgacgc cgccgggcac
     1441 agcgagcagt ccgcctcctt caccgggaag gacgggaagt tccccggcaa catccacgcc
     1501 gtcaccgact gccccggcgc ctgcgcctcg cagccggtcc actccaccgg cagcgccgcc
     1561 gggccggccg gcgccctgcc cggctacgtg agcgtcggct cctcttcggc cacccaggac
     1621 ctgtcgatgg acgacaaggg ccgcctcgtc tcgaccgcca cctcggagct cgacaacgtc
     1681 tcgatcgggc cgaagaacga agtccacttc tcccggctgg tgaccaccgc ccaggccctc
     1741 ggcgccggcg ccgagaacag caaggacggt cgggccgaca tccggatcga caacttctac
     1801 atcctcgaca accccgtcga gctcacccgg gccgggctgc ggctggccaa cgccggcccc
     1861 tcggaccagg aggcctacga cggcgccaag gtcctgctga agaagctccg ggaccggggg
     1921 atcatcctca acctgccgaa cttcgacctc caggtcgtga aggccccgga ccacgtgacc
     1981 gtggacgtcc cggcgctgtc ggtgatcttc gagcagtcgg ccgggccggt gcaggccgcg
     2041 gcgctgagcg atccggtcca gctcggtcac tc
//
LOCUS       DATGJT010000590         5116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1325345, whole genome shotgun sequence.
ACCESSION   DATGJT010000590 DATGJT010000000
VERSION     DATGJT010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5116
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1325345"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1146
                     /locus_tag="VKX24_10195"
     CDS             <1..1146
                     /locus_tag="VKX24_10195"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013425805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HLJ08901.1"
                     /translation="GDPPGRRRFVTLFADPGRPLELEFGGTLSPVTVAYETWGELDRG
                     RSNAVLVAHALTGDSHAAGPAGPGHRYPGWWDHSIGPGKDIDTDRWFVVCPNVLGGCQ
                     GTTGPSSEAPDGRPFGSRFPTITIRDQVAVEAALADALGIERWAAVIGGSMGGMRALE
                     WAVGHPDRVERAVVVACGAAASAEQIALCSIQNDAIRADPAFRGGDYYDAGPGDGPHR
                     GMGIARRIGHLSYRSESELAVRFGRAPQPGEDPFGGGGRYAVESYLDHHADKLARRFD
                     AGSYVVLSEAMNHHDVGRGRGGVAAALADVRARVAVAGIDSDRLYPLYLQREIAEYLP
                     GRPEVTVIEALYGHDSFLIESEAVGAFIRAALEDGGAERRAAEERAG"
     gene            1488..2852
                     /locus_tag="VKX24_10200"
     CDS             1488..2852
                     /locus_tag="VKX24_10200"
                     /EC_number="4.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012783325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004122 - cystathionine beta-synthase
                     activity [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-synthase"
                     /protein_id="HLJ08902.1"
                     /translation="MEVADSLLDLVGNTPLVRLDRVGKRLDCQLLAKCEFLNGGGSVK
                     DRPAVAMVDAAEKAGLLHPGGTIVEPTSGNTGVGLAIVAARRRYRCVFVMPDKMSAEK
                     IKLLRAYGAEVVVCPTAVAPSDPESYYSVANRLTEEIPGAYQPNQYRNPENPESHVRS
                     TGPEIWRQTAGRITHFVAGIGTGGTITGVGRYLKGQNPTVQVIGADPEGSVYSGGDGR
                     PYLVEGIGEDFWPETYDRGVVDRVVAVTDRDSFLTARRVTREEGMLIGGSGGTAVWAA
                     LEIGKELGPDDVVVVIVPDSGRGYLSKVYNDEWMSDYGFLSVVGQTAGDILLRKSADL
                     PSLVHVHLDETVRDVIATMREFEVSQVPVVRAEPPLRTSSEVAGSVAERELMARAFSD
                     PAVLDRPVAEVMSPPLPSVGLGEAVDVVVGALDSATAVLVLDAGHPVGILTRTDLLAF
                     LTGR"
     gene            2849..4027
                     /locus_tag="VKX24_10205"
     CDS             2849..4027
                     /locus_tag="VKX24_10205"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013872216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HLJ08903.1"
                     /translation="MRAGSGGAGGGFETRAIHAGQPADPETGAVMVPIYQSSTFAQEG
                     IGRHKGYEYARTGNPTRTALEQCLASLEGAAFGFCFASGMAAEDAVLRLLQPGDHLVL
                     PTDAYGGTWRLVDKVHAPAGLRYDAADLTVPDNLAAAWRPETRMVWIETPSNPLLSVV
                     DVAAVAAFAAERGAITVVDNTFATPYLQTPLALGADVVVHSTTKYLGGHSDVVGGFAG
                     VSDGVLAERLGFLQNAAGAVPGPMDCFLTMRGVKTLGVRMDRHCANAAAVVEFLAGHP
                     AVASVLWPGLPSHPGHDVAVRQMRHFGGMVSFTLHGGSAAAAGLVERTELITLAESLG
                     GVESLIEVPALMTHLSVAGSTNEVDPGLVRLSVGIETVDDIVADLGRALQGLTGTAAH
                     "
     gene            4039..>5116
                     /locus_tag="VKX24_10210"
     CDS             4039..>5116
                     /locus_tag="VKX24_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005154761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase family
                     protein"
                     /protein_id="HLJ08904.1"
                     /translation="MSSDREWGFRTRAVHAGGRPDPTTGARQVPIYQTTSFVFEDTAD
                     AADLFALQKYGNIYTRIANPTVAAFEERLASLEGAIGAVAASSGMAAELMTLVCLAGA
                     GDHVVSSSALYGGTHTLFDVTLRRLGVDTTFVDPAAPEAFAAAIRPETKLLYTEIVAN
                     PSGTVADIAALADVAHAENLPLCIDATLATPYLCRPIEHGADIVVHSATKFIGGHGTT
                     IAGVVAEAGTFNWGNGRFPGFTDAVPSYGGLRFWENFGEYAFCTKLRVEQLRDMGAAM
                     SPFSAFLLLSGLETLALRMEQHVANAARVAAWLEEHPAVSWVRYAGLPSSPSHDLAKR
                     YMPKGPGAVFSFGVEGGRDAGRVFI"
BASE COUNT          664 a         1885 c         1864 g          703 t
ORIGIN      
        1 ggcgacccgc ccgggcgccg gcggttcgtc acgctgttcg ccgaccccgg ccgcccgctc
       61 gaactggagt tcggaggaac gctctcgccg gtcaccgtgg cctacgagac gtggggggag
      121 ctcgaccggg gccggagcaa cgccgtcctc gtggcccacg ccctcaccgg cgacagccac
      181 gccgccgggc cggccggtcc cggacatcgc taccccggct ggtgggacca ctcgatcggg
      241 ccggggaagg acatcgacac cgatcgctgg ttcgtggtct gccccaacgt cctcggcggg
      301 tgccagggca cgacaggccc gtcctccgag gcgccggacg ggcgcccctt tggcagccgc
      361 ttccccacga tcacgatccg cgaccaggtg gccgtcgaag cggcgctggc cgacgccctc
      421 ggcatcgagc ggtgggcggc ggtgatcggc ggctcgatgg gcgggatgcg ggcgctggag
      481 tgggccgtcg gccaccccga ccgggtggag cgggcggtgg tcgtggcctg cggggcggcg
      541 gccagcgcgg agcagatcgc cctctgctcc atccagaacg acgccatccg ggccgacccg
      601 gccttccggg gcggcgacta ctacgacgcc gggcccggag acggccccca ccggggaatg
      661 gggatcgccc gccggatcgg gcacctgagc taccggagcg agtcggagct ggcggtgcgc
      721 ttcggccggg cgccccagcc gggcgaggac cccttcggcg gcggcggccg ttacgccgtc
      781 gagtcgtacc tcgaccacca cgccgacaag ctcgcccggc gcttcgacgc cggcagctac
      841 gtcgtgctgt cggaggccat gaaccaccac gacgtcggcc ggggtcgggg cggggtggcc
      901 gccgccctcg ccgacgtccg cgccagggtg gccgttgcgg ggatcgacag cgaccggctc
      961 tacccgctgt acctccagcg ggagatcgcc gagtacctgc ccggccgtcc ggaggtcacg
     1021 gtgatcgagg cgctctacgg ccatgactcg ttcctcatcg agtcggaggc cgtcggggcg
     1081 ttcatccggg cggccctgga ggacggtggc gccgagcggc gcgccgccga ggaacgggcc
     1141 ggttgacgat gacggggcac gaggagggag cgggcatgcg ggtgctggtg gtggtgggcg
     1201 gcgccgaacc gccggaacgg ctggtggtgc gttcagaccg ggtgctgcgg acgccgggcc
     1261 cggagctcga gccccagctc ctggccgacg tccgggccca catcccggag gacgtcgccg
     1321 tcgtcggcgc ccccggacgg ccggagtccg acgccgcggc ggcggccgcc gccgccgagc
     1381 tgcgggcgca tggcttcccc gtcaccctct acaccgacgc gccgccggcg gccgggacgg
     1441 cgccggacgg cctccgcatc cgctccctca gcgaccgggg tcccgccatg gaggtggccg
     1501 actcgctgct cgacctcgtc gggaacacgc cgctggtgcg cctcgaccgg gtcggcaagc
     1561 ggctcgactg ccagctgctg gccaagtgcg agttcctgaa cggcggcggc agcgtgaagg
     1621 accggccggc ggtggccatg gtcgacgccg ccgagaaggc ggggctgctc cacccgggcg
     1681 ggacgatcgt cgagccgacg tcgggcaaca ccggcgtcgg cctcgccatc gtcgccgccc
     1741 gccgccggta ccggtgcgtc ttcgtcatgc ccgacaagat gagcgccgag aagatcaagc
     1801 tgctgcgggc ctacggcgcc gaagtcgtcg tgtgcccgac ggcggtggcg ccgtccgatc
     1861 ccgagtccta ctactcggtg gccaaccggc tgacggagga gatccccggc gcctaccagc
     1921 ccaaccagta ccgcaacccc gagaaccccg agtcccacgt gcgctccacc ggcccggaga
     1981 tctggcgcca gaccgccggg cggatcaccc acttcgtggc cggcatcggc accggcggca
     2041 ccatcaccgg cgtcgggcgc tacctgaagg ggcagaaccc gacggtgcag gtcatcggcg
     2101 ccgaccccga ggggtcggtg tactccggcg gcgacgggcg gccctatttg gtggagggca
     2161 tcggcgagga cttctggccc gagacctacg accgcggcgt cgtcgatcgc gtcgtggcgg
     2221 tgaccgaccg cgactccttc ctcaccgccc ggcgggtgac ccgggaggag ggcatgctga
     2281 tcggcggctc gggcggtacg gccgtgtggg cggcgctcga gatcggcaag gagctcggcc
     2341 ccgacgacgt cgtggtcgtg atcgtccccg actccgggcg gggctacctg tcgaaggtct
     2401 acaacgacga gtggatgtcg gactacgggt tcctctccgt cgtcggccag accgccggcg
     2461 acatcctgct ccgcaagtcg gccgacctcc cctccctcgt gcatgtccac ctcgacgaga
     2521 cggtgcgcga cgtcatcgcc accatgcggg agttcgaggt gtcgcaggtc ccggtggtgc
     2581 gggccgagcc gccgctgcgg acgtcgtcgg aggtggcggg gagcgtcgcc gagcgggagc
     2641 tgatggcccg ggcgttctcc gatcctgcgg tgctcgaccg gccggtggcc gaggtcatgt
     2701 cgccgccgct gccgagcgtc gggctggggg aggccgtcga cgtcgtcgtc ggcgccctcg
     2761 attccgccac ggcggtgctg gtgctcgacg ccgggcatcc cgtcgggatc ctcacccgga
     2821 cggatctgct ggccttcctc accggtcgat gagggccggt tccggagggg cgggcggcgg
     2881 cttcgagacc cgggccatcc acgccgggca gccggccgac ccggagaccg gcgcggtcat
     2941 ggtccccatc taccagtcgt cgaccttcgc ccaggagggg atcggccgcc acaagggcta
     3001 cgagtacgcc cggaccggca acccgacccg gaccgccctc gagcagtgcc tggcctcgct
     3061 ggagggcgcc gccttcgggt tctgcttcgc cagcgggatg gccgccgagg acgccgtcct
     3121 ccgactgctg caacccggcg accacctcgt gctcccgacc gacgcctacg gcgggacgtg
     3181 gcggctggtc gacaaggtcc atgcgccggc cggtctccgc tacgacgccg ccgacctcac
     3241 ggtccccgac aacctggccg cggcgtggcg gccggagacg aggatggtct ggatcgagac
     3301 gccgtcgaat ccgctcctgt cggtcgtcga cgtcgccgcc gtggccgcct tcgccgccga
     3361 gcgcggcgcc atcaccgtcg tcgacaacac gttcgccacg ccgtacctcc agacgccgct
     3421 ggcgctcggc gccgacgtcg tcgtccactc cacgacgaag tacctcgggg gccactccga
     3481 cgtcgtcggc ggcttcgccg gggtcagcga cggcgtcctc gccgagcggc tcggcttcct
     3541 ccagaacgcc gccggcgccg tccccggccc gatggactgc ttcctcacca tgcggggcgt
     3601 gaagaccctc ggcgtgcgga tggaccgcca ctgcgccaac gccgccgccg tcgtcgagtt
     3661 cctggccggc cacccggcgg tggcttcggt gttgtggccg gggctgccct cgcatcccgg
     3721 ccacgacgtg gcggtgaggc agatgcgcca cttcggcggc atggtgtcgt tcacgctcca
     3781 cggcggctcg gccgccgccg ctgggctggt ggagcggacg gagctcatca cgctggccga
     3841 gtcgctgggc ggcgtcgagt cgctcatcga ggtgccggcg ctgatgacgc acctgtcggt
     3901 ggcgggatcg acgaacgagg tcgaccccgg cctcgtgcgg ctgtcggtgg ggatcgaaac
     3961 cgtcgacgac atcgtggccg acctgggccg ggcgctccaa ggcctgaccg gcacggcggc
     4021 ccattagcct cgttccccat gagcagcgat cgagagtggg gattccggac ccgggccgtc
     4081 cacgccggcg gtcggcccga cccgaccacc ggggcccggc aggtacccat ctaccagacg
     4141 acgagcttcg tcttcgagga cacggccgac gccgccgacc ttttcgccct ccagaagtac
     4201 ggcaacatct acacccgcat cgccaacccc acggtggcgg cgttcgagga gcggctggcc
     4261 tcgctggaag gggccatcgg ggcggtggcg gccagctccg gcatggccgc cgagctgatg
     4321 acgctggtct gcctggccgg cgccggcgac cacgtggtgt cgagctcggc gctctacggc
     4381 ggcacccaca ccctgttcga cgtgacgctg cgccggctgg gggtggacac gacgttcgtc
     4441 gacccggccg cgcccgaggc gttcgccgcc gccatccggc ccgagaccaa gctcctctac
     4501 accgagatcg tggccaaccc gtcgggcacc gtggccgaca tcgccgccct ggccgacgtc
     4561 gcccacgccg agaacctgcc gctgtgcatc gacgccaccc tcgcgacgcc atacctgtgc
     4621 cgacccatcg agcacggcgc cgacatcgtc gtccactcgg cgacgaagtt catcggcggg
     4681 cacggcacga cgatcgccgg cgtcgtcgcc gaggccggca ccttcaactg gggcaatggt
     4741 cgcttccccg gtttcaccga tgccgtcccg tcgtacgggg gcttgaggtt ctgggagaac
     4801 ttcggcgagt acgccttctg caccaagctc cgggtcgagc agctccgcga catgggagcg
     4861 gcgatgtcgc cgttctcggc cttcctcctc ctctccgggc tcgagaccct ggcgctgcgc
     4921 atggagcagc acgtggccaa cgccgcccgg gtggcggcct ggctcgagga gcacccggcg
     4981 gtgtcgtggg tccgctacgc cgggctgccg tcctcgccgt cgcacgacct ggcgaagcgg
     5041 tacatgccca aagggcccgg ggcggtcttc agcttcggcg tggagggcgg ccgcgacgcc
     5101 ggacgggtgt tcatcg
//
LOCUS       DATGJT010000591         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1119865, whole genome shotgun sequence.
ACCESSION   DATGJT010000591 DATGJT010000000
VERSION     DATGJT010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1119865"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..433)
                     /locus_tag="VKX24_10215"
     CDS             complement(<1..433)
                     /locus_tag="VKX24_10215"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020661363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ08905.1"
                     /translation="MDLGLQGQVVLVTGAGQGLGREIGLAFAREGAHVAFHYRSSGAG
                     AEEAAAEAGRLTGAALAVQADVRSDDEVTAAVEAVESQLGPIGVLVNNAAATGSKRFL
                     DTTPEDWALQVDVTVTGTLRVTQTVARRMVDRSPSGGHPRAP"
     gene            578..2179
                     /locus_tag="VKX24_10220"
     CDS             578..2179
                     /locus_tag="VKX24_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018335553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HLJ08906.1"
                     /translation="MSTVLATRVDPDSAAFAENADAFSRLLAALDEQQARARAGGGPK
                     YAERHKARGRLLAHERIELLLDEDAPFLEFSTVAAYGTEFQVGASLVTGIGVVSGVEC
                     VLIAHDPTVRAGASNPYTWKKVSRAMTIARENRLPVINLVESSGGDLPSQAELFLPAG
                     RLFHDLTVLSALGIPTIALVFGNSTAGGAYVPGMCDYAVLVKQQAKVFLGGPPLVKMA
                     TGEDADDESLGGAEMHARISGLADYMADDEVDCIRIGRQIVADLGFRKLGPGPDQPPE
                     PPVHDPEELLGIVSVNLKVPFDPREVLTRIVDGSRFSEYKPLYGPALVTGWCHVHGYR
                     LGVLANAHGVLQNEEAQKATEFILLANQTDTPLIFLQNTTGYMVGTSYEQRGILKDGA
                     KMINAVTNSEVPHLTITMASSFGAGNYGMSGRSFDPRFAFAWPGAKLAVMGAAQLAGV
                     LSIVGRASANAAGRPFDEEADRARTAAIEAQIEAESHAFFVTARLYDDGVIDPRDTRT
                     VLGLTLSAVHSAPVKGRRGFGVFRM"
BASE COUNT          316 a          842 c          764 g          311 t
ORIGIN      
        1 cgggggctcg ggggtgcccc ccggaaggag agcggtcgac catccgccgg gcgaccgtct
       61 gggtgacccg cagcgtgccg gtcacggtca cgtcgacctg cagggcccag tcctcgggcg
      121 tcgtgtcgag gaaccgcttc gagccggtgg cggcggcgtt gttgaccagc acgccgatcg
      181 gcccgagctg cgactcgacc gcctcgacgg cggcggtcac ctcgtcgtcg gagcggacgt
      241 cggcctgaac ggccagcgcc gctcccgtca gccgcccggc ctcggccgcc gcctcctcgg
      301 ccccggcgcc ggaggaccgg tagtggaagg cgacgtgggc cccctcccgg gcgaaggcca
      361 gcccgatctc ccggcccagg ccctgcccgg ccccggtgac gaggacgacc tgtccctgca
      421 ggcccagatc catgccgtgt ccccctttcg cccgccaggc tacggggtag ggggcgggca
      481 tgaccgaccg tcgtcctcgg agttccgggg cgaggcgcag cccttcgacc gtgagtcgaa
      541 taattgactt tggggcgaga tctgctacgg tgccggggtg agcaccgtac tggcgacgcg
      601 cgtcgaccct gacagcgccg cattcgccga gaacgccgac gccttctccc gcctcctcgc
      661 cgcgctcgac gagcagcagg cccgggcccg ggccgggggc ggcccgaagt acgccgagcg
      721 gcacaaggcc cggggccggc tgctggccca cgagcggatc gagctgctgc tcgacgagga
      781 cgcgccgttc ctcgagttct ccaccgtggc cgcctacggc acggagttcc aggtcggcgc
      841 cagcctggtg accgggatcg gcgtggtgtc gggcgtcgag tgcgtgctga tcgcccacga
      901 cccgaccgtg cgggcggggg cctcgaaccc ctacacctgg aagaaggtgt cccgggcgat
      961 gacgatcgcc agggagaacc ggctgccggt catcaacctc gtcgagtcct cgggcggtga
     1021 cctcccgagc caggccgagc tgttcctccc cgccggccgg ctcttccacg acctgacggt
     1081 gctgtcggcc ctgggcatcc cgacgatcgc cctcgtcttc ggcaactcca ccgccggcgg
     1141 ggcctacgtg ccggggatgt gcgactacgc cgtcctcgtc aagcagcagg ccaaggtgtt
     1201 cctcggcggc ccgccgctgg tgaagatggc gacgggggag gacgccgacg acgagtccct
     1261 cggcggcgcc gagatgcacg cccgcatctc cggcctcgcc gactacatgg ccgacgacga
     1321 ggtcgactgc atccgcatcg gccgccagat cgtggccgac ctcggcttcc gcaagctcgg
     1381 ccccgggccc gaccagccgc ccgagccgcc ggtgcacgac cccgaggagc tgctcgggat
     1441 cgtgtcggtc aacctcaagg tgccgttcga cccccgggag gtcctgaccc gcatcgtcga
     1501 cggctcacgc ttctcggagt acaagccgct ctacggcccg gcgctcgtga ccgggtggtg
     1561 ccacgtccac ggctaccggc tcggcgtgct ggccaacgcc cacggcgtcc tccagaacga
     1621 ggaggcccag aaggccaccg agttcatcct gctagccaac cagaccgaca cgccgctgat
     1681 cttcctgcag aacaccaccg gttacatggt cgggaccagc tacgagcagc gcggcatcct
     1741 caaggacggc gccaagatga tcaatgccgt gaccaactcc gaggtcccgc acctcaccat
     1801 cacgatggcg tcctccttcg gtgccggaaa ctacggcatg tcgggccggt ccttcgaccc
     1861 gcggttcgcc ttcgcctggc ccggcgccaa actggccgtg atgggcgcgg cccaactcgc
     1921 cggggtgctc tcgatcgtgg gccgggcgag cgccaacgcc gccgggcggc cgttcgacga
     1981 ggaggcggac cgggcccgca cggccgcgat cgaggcccag atcgaggccg agtcgcacgc
     2041 cttcttcgtc accgcgcggc tgtacgacga cggcgtgatc gacccgcgcg acacccgcac
     2101 cgtcctgggc ctgaccctgt cggccgtgca ctccgccccc gtcaaaggcc gccgcggctt
     2161 cggcgtgttc cggatgtgac gcccgtggtc atcagcacgc tgctcatcgc caaccgcggt
     2221 gagatcgcgg ccc
//
LOCUS       DATGJT010000592         3137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_599194, whole genome shotgun sequence.
ACCESSION   DATGJT010000592 DATGJT010000000
VERSION     DATGJT010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3137
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599194"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..175)
                     /locus_tag="VKX24_10225"
     CDS             complement(2..175)
                     /locus_tag="VKX24_10225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08907.1"
                     /translation="MQPKPPRLLPTLGLVVLWLALYFLWVAVRPTAPVVTTRPSKTAT
                     TTTTAEPLFKFKP"
     gene            216..1343
                     /gene="ugpC"
                     /locus_tag="VKX24_10230"
     CDS             216..1343
                     /gene="ugpC"
                     /locus_tag="VKX24_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011292189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HLJ08908.1"
                     /translation="MAEIVLSGVTKAFPGGAVAVSSLDLEVADGEFLVLVGPSGSGKT
                     TVLRMVGGLEEATAGEIRIGGRDVTHLAPRERDIAMVFQTYALYPHMTVFQNMAFGLK
                     LRKTPGAEVRRRVEETAALLGLSDLLDRKPRQLSGGQRQRVAMGRAIVREPAAFLMDE
                     PLSNLDAKLRVQMRAEITRLHHRLRTTTLYVTHDQTEAITMADRVAVMRDGTLQQLDA
                     PAVLYDDPVNRFVAGFIGSPAMNVVTARLAAADGGTRVVASFGGHRLVVPEAVLARRP
                     GAGAVVAGGGDVALGVRPEDIEDAEFVPGAGPDELLEVTVDLAEPLGAETIVHFDAAP
                     GAPFTARLSPRSTVRAGRPVKLAVDVERLHLFDPVSGLSLR"
     gene            1428..2720
                     /locus_tag="VKX24_10235"
     CDS             1428..2720
                     /locus_tag="VKX24_10235"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLJ08909.1"
                     /translation="MPSLLVTNDFPPKVGGIQSYLWELWRRLPADEVTVLTTPYPGAA
                     EFDRAQPFRVVRDRNRVLLPTPALAGRIDALALEIGAGVIFLDPALPLGALGPRLVAA
                     PYVAVLHGAEVTVPGRLPGTRALLRRVLRSAAGVLAAGTYPADEAARGAGRPLPGLVV
                     PPGVDVERFRPNGDEAARAAVRRRYGLPEAAPVVLGVSRLVPRKGFDVLIDAVARLAR
                     RRFPGPAPGGDSSIEAAGAVHLALAGTGRDRDRLARRAARAGIGDRFHLLGRVPDEDL
                     AAVYSASDVFAMCCRERWGGLEAEGFGIVFLEAAACGLPAVAGGSGGAGEAVEDGGTG
                     FVVDPLDAGAVADALARLLDDPELRRTMGARARARAETSFAYDGLAARLEPLARGDLS
                     GLTPIGSPGPGPPTHPAPPTHPSPPARPAPPTRPTAAP"
     gene            2717..>3137
                     /locus_tag="VKX24_10240"
     CDS             2717..>3137
                     /locus_tag="VKX24_10240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08910.1"
                     /translation="MTSERPAALPGRRIIQASLAGTALFAVTAFPAAAGVAAFKLPAA
                     VLSLGLFVAAIPLSLLALARAAVRTARQEDRITVGGLFFLQGSAPRPVRRLLLGSLVA
                     ALLVAVLTTSGEPFGVLQPVFPLALCARWGARYGTFPR"
BASE COUNT          326 a         1207 c         1168 g          436 t
ORIGIN      
        1 cctacggctt gaacttgaac agcggttcgg cggtggtggt ggtcgtcgcc gttttcgacg
       61 gtcgcgtcgt gacgacgggc gcggtcgggc ggaccgccac ccacaggaag tagagggcga
      121 gccagaggac gacgagaccc agcgtcggca gcaggcgggg gggtttcggc tgcatcagcg
      181 gcgccacgat agccagttgt tacgcttcca ccggcatggc ggagatcgtt ctgtccggtg
      241 tcaccaaagc gtttccgggc ggggcggtgg cggtgtcgtc gctcgatctc gaggtcgccg
      301 acggtgagtt cctggtgctc gtcggcccgt cgggatcggg caagacgacg gtgttgcgca
      361 tggtcggcgg cctcgaggag gcgacggccg gcgagatccg catcggcggg cgggacgtca
      421 cccacctggc gccccgggag cgggacatcg ccatggtctt ccagacctac gccctctacc
      481 cccacatgac ggtgttccag aacatggcct tcgggctcaa gctccggaag acgccggggg
      541 ccgaggtccg ccgccgggtg gaggagactg ccgccctgct cgggctctcc gacctgctcg
      601 accgcaagcc ccggcagctc tccggcggac agcggcagcg ggtggccatg ggccgggcga
      661 tcgtccggga gccggccgcc ttcctcatgg acgagccgct gtcgaacctc gacgccaaac
      721 tccgggtcca gatgcgggcc gagatcaccc gcctccacca ccggttgcgg acgacgacgc
      781 tctacgtcac ccacgaccag acggaggcca tcaccatggc cgatcgggtg gcggtgatgc
      841 gcgacggcac gctgcagcag ctcgacgccc ccgccgtcct ctacgacgac ccggtcaacc
      901 ggttcgtggc cggcttcatc ggctcgccgg ccatgaacgt cgtgaccgcc cggctggcgg
      961 cggcggacgg cgggacgcgg gtggtcgcct ccttcggcgg tcaccggctg gtggtgccgg
     1021 aggcggtcct ggcccgccgg cccggggccg gagcggtggt ggccggcggc ggcgacgtgg
     1081 cgctcggggt gcggccggag gacatcgagg acgccgagtt cgtcccgggc gccgggccgg
     1141 acgagctcct cgaggtcacc gtcgacctcg ccgagccgct cggcgccgag acgatcgtgc
     1201 atttcgacgc cgccccgggc gcgccgttca ccgcccgcct ttcgccccgg agcaccgtcc
     1261 gggccggccg gccggtcaag ctggccgtcg acgtcgagcg cctccacctc ttcgaccccg
     1321 tctccggcct cagcctccgc tgaaccggcg ttcttcaccg tgcgatgacg ccggtgagga
     1381 acgccggttg gggggcgccg gttgggggag gcctagcctc gccgacgatg ccgtcgttgc
     1441 tggtgaccaa cgacttcccg cccaaggtgg gcgggatcca gtcgtacctc tgggagctgt
     1501 ggcggcggct gccggccgac gaggtcaccg tgctcaccac gccctatccc ggagcggcgg
     1561 agttcgaccg ggcccagccg ttccgggtcg tgcgggaccg aaatcgtgtg ctgctcccca
     1621 caccggcgct ggccgggcgg atcgatgccc tggccctgga gatcggcgcc ggcgtgatct
     1681 tcctcgaccc cgccctgccg ctcggcgccc tcgggccccg gttggtggcg gcgccctacg
     1741 tcgccgtcct ccacggcgcc gaggtcaccg tgcccggccg gctgccgggc acccgggcgc
     1801 tgctccggcg ggtgctccgc tccgcagccg gcgtcctcgc cgccggcacc tatcccgccg
     1861 acgaggcggc ccggggcgcc ggccggccgc tgcccgggct cgtcgtcccg cccggcgtcg
     1921 acgtcgaacg gttccgcccg aacggcgacg aggcggcccg ggccgccgtc cgccggcgct
     1981 acgggctccc cgaggcggcg ccggtggtgc tcggggtgag ccggctcgtg cctcgcaagg
     2041 gcttcgacgt cctcatcgac gccgtggccc gtctcgcccg gcggcggttc ccgggcccgg
     2101 ccccgggcgg cgactcgtcc atcgaggccg ccggcgcggt ccacctcgcc ctggccggga
     2161 ccggccggga ccgcgaccgc ctggcccggc gggccgcccg ggccgggatc ggcgaccggt
     2221 tccacctgct cggccgggtc ccggacgagg acctcgccgc ggtgtactcc gcctccgacg
     2281 tcttcgccat gtgctgtcgg gagcggtggg gcggtctcga ggccgagggc ttcgggatcg
     2341 tcttcctgga ggcggcggcc tgcgggctgc cggcggtggc cggcgggagc ggcggtgccg
     2401 gtgaggcggt ggaggacggc gggaccggat tcgtcgtcga tcccctcgac gccggcgcgg
     2461 tggccgacgc cctggcccgg ctgctcgacg atcccgagct ccggcgcacg atgggcgccc
     2521 gggcccgggc ccgggccgag acgtcgttcg cctacgacgg cctggccgcc cggctggagc
     2581 cgctggcccg aggcgacctg tccggcctga cgccgatcgg ctccccgggt cccggccccc
     2641 cgacccaccc ggcgcccccg acccacccgt cgccgccggc ccgcccggcg ccgccgaccc
     2701 gtccgacagc ggcaccgtga cctccgaacg gccggccgcg ctccccggcc gccgcatcat
     2761 ccaggccagc ctggcgggaa cggcgctgtt cgccgtcacg gccttccccg ccgcggccgg
     2821 cgtcgcggcg ttcaagctcc cggccgccgt cctcagcctc gggctgttcg tggccgcgat
     2881 cccgctgtcg ctgctggcgc tggcccgagc ggcggtccgg accgcccgcc aggaggaccg
     2941 catcaccgtc ggcgggctgt tcttcctgca ggggtcggcg ccccggccgg tccgccggct
     3001 gctcctcggc tcgctggtgg ccgcgctcct ggtagcggtg ctcaccacct ccggcgagcc
     3061 gttcggcgtc ctgcagccgg tcttcccgct ggcgctgtgc gcccggtggg gcgcccggta
     3121 cgggaccttc ccccgca
//
LOCUS       DATGJT010000593         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_809460, whole genome shotgun sequence.
ACCESSION   DATGJT010000593 DATGJT010000000
VERSION     DATGJT010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_809460"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VKX24_10245"
     CDS             complement(<1..797)
                     /locus_tag="VKX24_10245"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007916497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004351 - glutamate decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006540 - glutamate decarboxylation to
                     succinate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HLJ08911.1"
                     /translation="MLSAKVPLDELDDDQAVVPTYARRGLSQPVPRYELPENGMEPSS
                     AYQLIHDELALDGNPTLNLATFVTTWMDGEADRLMAETANKNAIDWDEYPQCVELQDR
                     CVNMLSRLYSAPEDARTIGCATVGSSEAIHLGGLAMKWRWKAAAEAAGRALGRPNLVM
                     GANVQVCWEKFARYFDVEPRYVPLTRDRFIIGVDEAMALVDENTIGVVGILGSTYTGE
                     YEPIAELSAALDERQAKDGLDVPIHVDAASGGFVAPFLQPELLWDFRL"
     gene            complement(831..1757)
                     /locus_tag="VKX24_10250"
     CDS             complement(831..1757)
                     /locus_tag="VKX24_10250"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HLJ08912.1"
                     /translation="MEIRHLQALVGVADHGSFSAAAEALGTVQSNVSAHIARLERELG
                     APLVDRSAGRLTEEGEIVVARARRMLVEMVSLVADVSAMRLEVIGTVRAGMIGTTGRW
                     LVPRLFALLREHHPRVQMTVADGTSASLEPRLVNGQLDLAVVSLPVIGDELVARPLFE
                     EDLMLVVPVDHPLAAGPRPLPLAALTELDLVLPLPNTALRDDIDRALRRANVTLKPAL
                     ELDGIRMIASLTFDGFGPAILPATAVPFHMRERFALIELENFPRRRVGVAQRRRGLPS
                     APTRAVIELLDAVANDPSQRPMGLHPPSPGRP"
     gene            1958..>2196
                     /locus_tag="VKX24_10255"
     CDS             1958..>2196
                     /locus_tag="VKX24_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HLJ08913.1"
                     /translation="MGAVFVDLDRTLLRGPSGPVLDLALRRRGVVPHDRKLPGAGALY
                     ALYSRLGENLVSMGLARSAAVLAGGWRRDEVLAAA"
BASE COUNT          304 a          737 c          835 g          320 t
ORIGIN      
        1 aggcggaagt cccagaggag ttcgggctgg aggaacgggg cgacgaaccc accgctggcg
       61 gcgtcgacgt ggatcggcac gtcgagcccg tccttcgcct ggcgctcgtc gagggcggcc
      121 gacagctccg cgatgggctc gtactcgccg gtgtaggtgc tcccgaggat cccgaccacg
      181 ccgatcgtgt tctcgtcgac gagggccatg gcctcgtcga ccccgatgat gaaacgatcc
      241 ctcgtgagcg gcacgtagcg gggctcgacg tcgaagtagc gcgcgaactt ctcccagcag
      301 acctggacgt tggcccccat caccaggttg ggccggccga gggcccggcc cgcggcctcg
      361 gccgccgcct tccagcgcca cttcatggcc agcccgccga ggtggatggc ctcggaggac
      421 ccgacggtgg cgcagccgat cgtgcgcgcg tcctcggggg ccgagtacag gcgcgacagc
      481 atgttgacgc agcggtcctg aagctcgacg cactgggggt actcgtccca gtcgatggcg
      541 ttcttgttgg cggtctcggc catgagccgg tcggcctcgc cgtccatcca ggtggtgacg
      601 aaggtggcga ggttcaaggt ggggttcccg tcgagggcga gctcgtcgtg gatcagctgg
      661 taggcgctgg agggctccat cccgttctcg ggcagctcgt agcgggggac cggctgggag
      721 agcccccgcc tcgcataggt cgggacgacc gcctggtcgt cgtcgagctc gtccaggggg
      781 accttggcgc tcagcatgtc gaacctccca ctcgggagcc gaccgtagtg tcaggggcgc
      841 ccgggcgagg gggggtgcag gcccatcggg cgctgggagg ggtcgttggc cacggcgtcg
      901 aggagctcga tcaccgcccg ggtgggcgcc gagggaagcc cgcggcggcg ctgcgcgacc
      961 ccgacccggc ggcgggggaa gttctcgagc tcgatgaggg cgaaccgctc ccgcatgtgg
     1021 aaggggaccg ccgtggcggg gaggatggcc ggtccgaacc cgtcgaaggt gagcgacgcg
     1081 atcatccgga tcccgtcgag ctcgagagcg ggcttgaggg tgacgttggc ccgccggagc
     1141 gcccggtcga tgtcgtcgcg cagcgcggtg ttcggcaggg ggagcacgag gtcgagctcc
     1201 gtcagggcgg cgagggggag gggccggggc ccggcggcga gggggtggtc cacggggacc
     1261 acgagcatca ggtcctcttc gaagagcggt ctggccacga gctcgtcgcc gatgaccggg
     1321 agggagacga cggctaggtc gagctgtccg ttcacgagcc ggggctcgag gctggcgctc
     1381 gtcccgtcgg cgacggtcat ctggacgcgg gggtggtgct cccgcaacag ggcgaagagc
     1441 cggggcacga gccagcggcc ggtcgtcccg atcatcccgg cgcggacggt gccgatgacc
     1501 tcgaggcgca tcgccgagac gtcggcgacc agggacacca tctcgaccag catccggcgg
     1561 gcccgggcga cgacgatctc gccctcctcg gtcagccggc cggcggagcg gtcgacgagg
     1621 ggggcgccga gctcgcgttc cagccgggcg atgtgcgccg acacgttcga ctggaccgtg
     1681 cccagcgcct cggctgcggc cgagaagctc ccgtggtcag cgacccccac caacgcctgc
     1741 aggtgccgga tttccatctt ctgtgaagat accaactatc gggtctagct gcttgacaga
     1801 tttgaccgga tgatccagaa tgggttctga ccgcaggagc aggaaccccc cctctgttcc
     1861 cgagccggtc aagagtgaag ggatcgccag cccccccggc ggtcccttca ctgcgttcac
     1921 ggggtctttc ggcccgaccc ggtagcctcg ccatcctgtg ggcgccgtct tcgtcgacct
     1981 cgaccgcacg ctgctgcgcg gcccgagcgg gccggtgctc gacctcgccc tccgccggcg
     2041 gggggtggtg ccccacgacc gcaagctgcc cggggccggc gccctctacg ccctctacag
     2101 ccgcctgggg gagaacctgg tctcgatggg cctggcccgt tcggcggcgg tcctcgccgg
     2161 gggctggcgc cgggacgagg tcctcgccgc cgccga
//
LOCUS       DATGJT010000594         2921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_289631, whole genome shotgun sequence.
ACCESSION   DATGJT010000594 DATGJT010000000
VERSION     DATGJT010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289631"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /locus_tag="VKX24_10260"
     CDS             <1..892
                     /locus_tag="VKX24_10260"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HLJ08914.1"
                     /translation="DANRAAARYSAAETAYAEISDQITDLEGQLADLSGRIGPLRERI
                     TRQAVAVYQDDVARAAVTSFEALAAAIRSDHSAHLVADLSSRDVPAIDALLDTRKRIA
                     DRRRDLLARRHDESVALADLAAQRDQINAELTAMAAALPTAPPRLPPTRTSRSASALS
                     QRLVRAPGSFVCPIDGPLAFSDDFGAPRGGGRRHMGNDLLNPRGTPNVAVIDGTIETK
                     PWGGGGIVIFLHGDDGNTYVYMHLLEIVGAVPRRVAQGEVLGLTGMTGDAQGYHTHFE
                     FHPGGGDAVSPYPLLSEACR"
     gene            complement(1000..2028)
                     /locus_tag="VKX24_10265"
     CDS             complement(1000..2028)
                     /locus_tag="VKX24_10265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08915.1"
                     /translation="MRRSVMRVLVAVGVVAAGGLSWTEVVAAAGHDINVTGDAAKCDK
                     TWGPPCFTPANGTVTSVAVGDSVTWHVLDGTHTVTPVDPAAFAGSGDLTGPDGSYSAT
                     FDKPGTFTFYCKHHGSVDKDGKTFHGMWGRIEVKGPTTTTSAPPPGSAPPSSGPPPGQ
                     PNPPPPPPQSGPPPPPPSSSGPPPSSSGGSGNGGNGPTAADLGRTWIGPPITEPPPPP
                     PAPRTAAGQSNQDQPGPSSGGRDNGNGNGREGKANANANSGPAYVPPDSALVPPIPAF
                     PTPTTAPLAGTPSGVPQGDAVAVLKHEGHGKHRTLVLLVTGLGVGAFAFGVGGWKYAH
                     RASKYWPA"
     gene            complement(2126..>2921)
                     /locus_tag="VKX24_10270"
     CDS             complement(2126..>2921)
                     /locus_tag="VKX24_10270"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007529897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HLJ08916.1"
                     /translation="PGLRLGTAIVPAFTRGPALIAQSAATLAAACGGRFVLGLGTSSD
                     VIVERWNSIPFERPYQRVRDTVRCVRALLSGQKVTEEYETFAVSGMRLAEPPGVPVPI
                     MVAALRPGMLRLAGRETDGAIINWLSADDVRTVAPYVRESDPGKEIVARIFVCPTADV
                     DKARAIGRRMVTAYLNVPVYAAFHDWLGRGDQLAKMWAAWREGDRAGALDAVPDRVVD
                     ELLVHGPPEACREQVEAYREAGVTTPVPLLVAPDDTAAALRGLAAR"
BASE COUNT          382 a         1088 c         1099 g          352 t
ORIGIN      
        1 cgacgccaac cgggcggcgg cccgctactc cgccgccgag acggcctacg ccgagatcag
       61 cgaccagatc acggacctcg aggggcagct ggccgacctc tccggccgca tcggcccgct
      121 gcgggagcgg atcacccgcc aggccgtggc cgtctaccag gacgacgtcg cccgggccgc
      181 ggtcaccagc ttcgaagccc tggccgccgc catccgctcc gaccactccg cccacctggt
      241 ggcggacctg agctcccggg acgtgccggc catcgacgcc ctgctcgaca cgcggaagcg
      301 gatcgccgac cgccggcggg acctgctggc ccgccgccac gacgagagcg tggcgctcgc
      361 cgacctcgcc gcccagcggg accagatcaa cgccgagttg accgccatgg ccgccgccct
      421 gccgacggcg ccgccccgcc tgccgccgac ccgcacgagc cgctcggcgt cggcgctgag
      481 ccagcgcctc gtgcgggcgc ccggttcgtt cgtctgcccc atcgacgggc cgctggcgtt
      541 cagcgacgac ttcggcgccc cccggggcgg cggacggcgc cacatgggca acgacctcct
      601 gaacccccgg ggcacgccga acgtggccgt gatcgacggc acgatcgaga ccaagccctg
      661 gggcggcggc ggcatcgtga tcttcctgca cggcgacgac ggcaacacct acgtctacat
      721 gcacctgctg gagatcgtcg gcgctgtgcc gaggcgggtg gcccagggcg aggtcctcgg
      781 gctgaccggc atgaccggcg acgcccaggg ctaccacacg cacttcgagt tccaccccgg
      841 cggcggcgac gcggtgagcc cctacccgct cctcagcgaa gcttgccgtt aggccgcgag
      901 gcaaccgccg tggggctggg gccccacggc accgcggcgg gatgcccgga gggcaggggc
      961 ccgccgccgg aagcaacgta gggagtgcgc cagcactccc tacgccggcc agtacttcga
     1021 ggctcggtgg gcgtacttcc agccgccgac gccgaaggcg aaagcgccga cgcccagccc
     1081 ggtcaccagg aggacgagcg tgcggtgctt gccgtggccc tcgtgcttga ggacggccac
     1141 ggcgtcaccc tggggtactc ccgagggcgt gccggccagc ggtgccgtgg tcggggtcgg
     1201 gaaggcgggg atcggcggga cgagggcgga gtcgggaggg acgtaggccg ggccgctgtt
     1261 ggcgttggcg ttggccttgc cttcccggcc gttgccgttc ccgttgtccc tcccgccgga
     1321 cgacgggccg ggctggtcct ggttcgactg gcccgccgcc gtacggggcg cgggcggcgg
     1381 cggcgggggc tcggtgatcg gcgggccgat ccacgtccgc ccgagatcgg cggcggtcgg
     1441 cccgttgccg ccgttgcccg agccgcccga agacgacggc gggggtcccg acgaggacgg
     1501 cggcggcggg ggcggccccg actgcggcgg aggcgggggc gggttcggct gacccggcgg
     1561 cgggcccgac gagggcggtg cggaccccgg cggtggcgcc gacgtcgtgg tggtcgggcc
     1621 cttgacctcg atcctgcccc acatgccgtg gaaggtcttg ccgtccttgt ccacgctgcc
     1681 gtggtgcttg cagtagaacg tgaacgtccc gggcttgtcg aaggtggcgc tgtaggagcc
     1741 gtcgggcccg gtgaggtcgc cggagccggc gaaggccgcg gggtcgaccg gcgtcaccgt
     1801 gtgggtgccg tcgaggacgt gccaggtgac ggaatcaccc accgccaccg aggtcaccgt
     1861 gccgttggcg ggcgtgaagc acggcggccc ccacgtcttg tcgcacttgg cggcgtcgcc
     1921 ggtgacgttg atgtcgtggc cggcggcggc gacgacctcg gtccacgaga gcccgccggc
     1981 ggcgacgacg ccaaccgcca cgagcacccg catcacggac cgacgcaccg ccacacctcc
     2041 gcaacctcga cgttcttgag cctctacact accgctagcc acagggctaa caagaccccc
     2101 gtcgatccgg cggcgccggc ggcactcagc gggcggccag cccccggagg gcggccgcgg
     2161 tgtcgtccgg cgccaccagg aggggcacgg gggtggtcac cccggcctcc cggtaggcct
     2221 cgacctgctc ccggcaggcc tccggcggcc cgtggaccag cagctcgtcg acgacccggt
     2281 cgggaacggc gtcgagggcg ccggcccggt cgccctcccg ccaggcggcc cacatcttgg
     2341 ccagctggtc gccccggccc agccagtcgt ggaaggcggc gtagaccggc acgttgaggt
     2401 aggcggtgac catgcgccgg ccgatggccc gggccttgtc gacgtcggcg gtggggcaga
     2461 cgaagatccg ggccacgatc tccttgcccg ggtcgctctc ccggacgtag ggcgccaccg
     2521 tccgcacgtc gtcggcggag agccagttga tgatcgcacc gtcggtctcc cggccggcca
     2581 gccgcagcat cccgggccgg agggcggcga ccatgatcgg gacgggcacg ccgggcggct
     2641 cggcgaggcg catgcccgag acggcgaacg tctcgtactc ctcggtgacc ttctgcccgc
     2701 tgagcaacgc ccgcacgcag cggacggtgt cgcgcacccg ctggtacggc cgctcgaacg
     2761 ggatgctgtt ccagcgctcg acgatgacgt ccgacgacgt gccgaggccg aggacgaagc
     2821 ggccgccgca ggccgcggcc agcgtcgccg ccgactgggc gatgagcgcc gggccccggg
     2881 tgaaggcggg cacgatggcc gtcccgagcc gcaaccccgg g
//
LOCUS       DATGJT010000595         2655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_703328, whole genome shotgun sequence.
ACCESSION   DATGJT010000595 DATGJT010000000
VERSION     DATGJT010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703328"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..865
                     /locus_tag="VKX24_10275"
     CDS             <1..865
                     /locus_tag="VKX24_10275"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLJ08917.1"
                     /translation="PKVAATVAGVAIPSERVEHLAGQWMAAQSNQALQGGAPGGQPDR
                     KTAAKQVLGFVIRSVFLEHLAAQMGVQDNPTALENLAPEEVPAGELQSAGWSKTDLQQ
                     SLRDARLSKAIGEKVFPKVAVSDVELRQKYDRNADFFHQTWRIQARVAYFDTLEAAKG
                     LQARHATGDAFDAAAKELGAKQAGSIGLVTPVTPLPQNVLDAVAHLAAGQSSDPLEGG
                     GGYLVVLADTREDRAPMSFEDARPALVPVLEDEQRQQLFYDWFSKRLGEAAVKISSHY
                     GKWDAANQVVT"
     gene            880..1470
                     /locus_tag="VKX24_10280"
     CDS             880..1470
                     /locus_tag="VKX24_10280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08918.1"
                     /translation="MHRGSATIRRAVVLGAGLAVAALLAAAGPASAHSGGRVQLFVDR
                     LALHSGGGNDWTVSLILVDADSGTLAPGFDVGAEATDAGGHSAGATALADHGGGEYTG
                     RLTAAPGNWQVAIRADTLPGGVVGVPLRKTYDVTLEPGKDVTVGGRAPGGSHGSGTGF
                     ALPLTAGVILAAIAGWLLLARRRRPGLAPARRQPLA"
     gene            1467..2645
                     /locus_tag="VKX24_10285"
     CDS             1467..2645
                     /locus_tag="VKX24_10285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08919.1"
                     /translation="MNGFRLLGSAVVGLVLGLAPAAAGARPAGAPAQPDLRVRIDRAD
                     KVGRTPLYVPVRVTVTEADTGKPPAVDHVVFAAARNGRGDQAGPFSLGVLELDDPSAR
                     GVHEGFVIVPYGGPWTITAVVDKAQPDPQAPPIVLARGSAEMTVDAPVPAAGAAAPAG
                     GTSSRKPPSEPFGVAVLWVHTMVAVGWGVAIALLALLALPAGRRLLSEHGTTTLDGNL
                     DRIVRATWWLTGLVVATGVYNLVKSVAYRVPLSVDQARRLFRLPYAEPYYVALAVKLA
                     VYTVMIGATLPLVAEARRRAADAEIDLGSAATAGDDDRSPWDNPDRVHDEGAPTGRLA
                     LRRRAGVASEPAWVPAERAAGRVRAMVGVMVVGGAVIMGAVTLLKYFHLLGELSRLSG
                     "
BASE COUNT          328 a         1001 c          995 g          331 t
ORIGIN      
        1 gcccaaggtg gcggccaccg tggccggcgt cgccatcccc tcggaacggg tcgagcacct
       61 ggccgggcag tggatggccg cccagagcaa ccaggcgctg cagggcggcg cgccgggcgg
      121 gcagcccgac cggaagacgg cggccaagca ggtcctcggc ttcgtcatcc gcagcgtctt
      181 cctcgagcac ctcgcggccc agatgggcgt ccaggacaac cccaccgcgc tggagaacct
      241 ggctcccgaa gaggtgccgg ccggcgagct gcagtcggcc ggctggtcga agaccgatct
      301 ccagcagtcg ctgcgcgacg cccgcctgtc gaaggccatc ggcgagaagg tgttccccaa
      361 ggtggcggtg tccgacgtcg agctgcgcca gaagtacgac cgcaacgccg acttcttcca
      421 ccagacgtgg cggatccagg cccgggtggc ctacttcgac acgctcgagg cggccaaggg
      481 cctgcaggcc cggcacgcca cgggggacgc cttcgacgcc gccgccaagg agctcggtgc
      541 caagcaggcc gggagcatcg gcctcgtcac gccggtcacg ccgctgcccc agaacgtcct
      601 cgacgccgtg gcccacctcg ccgccggtca gagcagcgat cccctggagg gcggcggggg
      661 ctacctcgtg gtcctggccg acacccggga ggaccgggcc ccgatgagct tcgaggacgc
      721 ccggccggcg ctggtcccgg tgctggagga cgagcagcgc cagcagctgt tctacgactg
      781 gttctccaag cggctgggcg aggccgccgt caagatctcg tcccactacg ggaagtggga
      841 cgcggccaac caggtggtga cctgacgggg gtggacgcca tgcacagggg gagcgcgacc
      901 atacggagag ccgtcgtcct cggggcgggg ctggccgttg cggcgctgct ggcggccgcc
      961 gggccggcct cggcccactc cggcggacgg gtccagctct tcgtcgaccg gctcgccctc
     1021 cactcgggcg gcgggaacga ctggacggtg tcgctgatcc tcgtcgacgc cgactccggg
     1081 acgctggcgc cgggattcga cgtcggcgcc gaggcgaccg acgccggggg gcactccgcc
     1141 ggggcgacgg ccctcgccga ccacggcggg ggcgagtaca ccggccgcct gaccgccgcc
     1201 ccgggcaact ggcaggtcgc catccgggcc gacaccctgc ccggcggcgt ggtcggcgtc
     1261 ccgctccgca agacctatga cgtcacgctc gagccgggga aggacgtcac cgtcggcggc
     1321 cgggcaccgg gcggcagcca tggctcggga accgggttcg ccctgccgtt gacggcgggc
     1381 gtcatcctgg ccgcgatcgc cggctggctg ctcctcgccc gccgccgccg gcccggcctg
     1441 gcgcccgccc ggcgccaacc gttggcatga acgggttccg gctcctgggt tccgccgtcg
     1501 tcgggctcgt cctgggactg gcgccggcgg cggcgggcgc ccgtccggcg ggggccccgg
     1561 cgcagcccga cctgcgggtg cggatcgacc gggccgacaa ggtgggccgg acgccgctct
     1621 acgtccccgt ccgggtcacg gtcaccgaag ccgacaccgg caaaccgccg gccgtcgacc
     1681 acgtcgtctt cgccgccgcc cggaacgggc gcggcgatca ggccggcccg ttcagcctcg
     1741 gggtgctgga gctcgacgac ccgtcggccc gcggcgtcca cgagggcttc gtcatcgttc
     1801 cctacggcgg gccgtggacc atcaccgccg tcgtcgacaa ggcgcagccc gatccccagg
     1861 cgccgccgat cgtcctcgcc cgcgggtcgg cggagatgac cgtcgacgcc cccgtcccgg
     1921 ccgccggggc ggcggcgccg gccggcggta cgtcgtcccg gaagccgccg agcgagccgt
     1981 tcggcgtcgc cgtcctctgg gtgcacacga tggtggcggt cggatggggg gtggccatcg
     2041 ccctgctggc gctgctggcc ctgccggccg gccggcgcct cctctcggag cacgggacga
     2101 cgacgctcga cgggaacctc gaccggatcg tccgggcgac ctggtggctg acgggcctcg
     2161 tcgtcgccac cggcgtgtac aacctcgtca agtcggtggc ctaccgggtg cccctgagcg
     2221 tcgatcaggc ccggcggctc ttccggctgc cctatgccga gccctactac gtggccctgg
     2281 ccgtgaagct ggccgtctac acggtgatga tcggcgccac cctgccgctc gtcgccgagg
     2341 cccggcgccg ggcggccgac gccgagatcg acctcggctc ggcggccacc gccggggacg
     2401 acgaccggtc cccctgggac aaccccgacc gcgtccacga cgagggggcc ccaacggggc
     2461 ggctggcgct gcggcgccgg gccggcgtcg cctccgaacc ggcctgggtc ccggcggagc
     2521 gggccgccgg gcgggtgcgg gccatggtgg gcgtcatggt cgtcggcgga gccgtgatca
     2581 tgggggcggt gacgctcctc aagtacttcc acctgctggg cgagctcagc cgcctctcgg
     2641 gttgaccggc ggcag
//
LOCUS       DATGJT010000596         2165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1431741, whole genome shotgun sequence.
ACCESSION   DATGJT010000596 DATGJT010000000
VERSION     DATGJT010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1431741"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..897)
                     /locus_tag="VKX24_10290"
     CDS             complement(169..897)
                     /locus_tag="VKX24_10290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020463805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HLJ08920.1"
                     /translation="MAETEFTGALPPDEVGLLEGLTTTRAIRRYRDEPVPEEALQAIL
                     FAATRAPSGSNRQPFRFIVLTDGPNAAEAKRLIAESARRIWGTKRETDAYDSGSGSRA
                     SSPKARMARAMQEYVDEFERVPVLILPCLVRYRAANSFEGGSVYPACQNLLLAARALG
                     YGGVMTGFHFGAEAGLRMLLGVPEDVFMAATITLGRPRGRHGPVRRRPMAELVYADAW
                     GAAPRWAVDPPGTRHTSAGPPTTS"
     gene            complement(944..>2165)
                     /locus_tag="VKX24_10295"
     CDS             complement(944..>2165)
                     /locus_tag="VKX24_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014738795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ08921.1"
                     /translation="GRPGVVDNVQTGMISLERVSKRYGKDSVAVAELSFGVGDGELCV
                     LVGPSGCGKTTTLRMINRMIEPTSGRILIDDIDVLEMDPVKLRRGIGYVIQHGGLFPH
                     RRIADNVATVPRLLGWDKARVDRRVNELLELVGLDPGQYGKRFPHELSGGERQRVGVA
                     RALGGDPPVLLMDEPFGAVDPVTRLRLQQELLDLQRELEKTIVFVTHDIEEAAKLGDR
                     IVVLSRGGVLEQHDTPAEILGRPATPFVADFVGSDRGVRRLGVTSISPEDLFHPPVVS
                     PDVSMLDARASAAGADSRWALVVDGADQLLGWIDLDPDLTGSVTDHVVPFEVQVPIGT
                     SLRAGLGEMLQHDVRWVPVVDGPRYLGILTPNALHAAMRRSVGGQPTVPGRTRSGTDS
                     ADPTATALGGEPRG"
BASE COUNT          293 a          759 c          822 g          291 t
ORIGIN      
        1 ccgacgacca actgagcggc accgagggac cgacgcgccc tccgagtggt gctggcgacg
       61 atccggtcgg cccgccgggg tgcgttccgg gcgattcccg gagtacccgt ctgcgggatc
      121 ggcgggccga gccggtaggg acaaaggggt ccctgggtgg acgacgggtc agctcgtggt
      181 cggcggaccg gccgaggtgt gccgggtgcc gggcggatcg accgcccacc tcggtgccgc
      241 cccccaggcg tcggcgtaga ccagttcggc catcggccgc cgccgcaccg ggccgtgacg
      301 cccccgcggg cgaccgaggg tgatggtcgc cgccatgaag acgtcctcgg ggaccccgag
      361 cagcatgcgc agcccggcct cggccccgaa gtggaagccg gtcatgaccc cgccgtagcc
      421 gagcgcccgc gccgcgagca gcaggttctg gcacgccggg tacaccgagc ccccctcgaa
      481 ggagttggcc gcccggtagc ggacgaggca ggggaggatg aggacgggga cccgctcgaa
      541 ctcgtcgacg tactcctgca tcgcccgggc catccgcgcc ttgggcgagg acgccctcga
      601 cccgctgccc gagtcgtagg cgtcggtctc gcgcttggtg ccccagatcc ggcgggccga
      661 ctcggcgatc aggcgcttgg cctcggccgc gttggggccg tcggtgagca cgatgaagcg
      721 gaagggctgg cggttcgacc cgctcggggc gcgggtcgct gcgaacagga tcgcctgcag
      781 cgcctcctcg ggcaccggct cgtcgcggta gcggcggatg gcccgggtcg tggtcagccc
      841 ttcgagcagg cctacttcgt cgggcggcag cgcgccggtg aactcggtct cggccatccc
      901 gtgttctacc gccccgggcc gggacggggc cccgcgacgg cgctcatccg cggggctcgc
      961 cgccgagggc ggtcgcggtc gggtcggccg agtccgtgcc cgaccgggtg cgccccggca
     1021 ccgtcggttg cccgccgacg gagcggcgca tggccgcatg gagggcgttc ggggtcagga
     1081 tcccgagata gcgggggccg tcgacgacgg gcacccagcg gacgtcgtgc tggagcatct
     1141 cgcccaaccc ggcccggagg gacgtgccga tcgggacctg gacctcgaag gggacgacgt
     1201 ggtcggtgac cgacccggtg aggtcggggt cgaggtcgat ccagccgagg agctggtcgg
     1261 ccccgtcgac gaccagggcc cagcggctgt cggccccggc ggccgacgcc cgggcgtcga
     1321 gcatcgagac gtcgggggag acgaccgggg gatggaagag gtcctcgggg ctgatggagg
     1381 tgaccccgag cctgcggacg ccccggtccg acccgacgaa gtcggcgacg aagggcgtgg
     1441 ccggacggcc gaggatctcg gccggggtgt cgtgctgctc gagcaccccg cccctcgaga
     1501 gcacgacgat ccggtcgccg agcttggccg cctcctcgat gtcgtgggtc acgaagacga
     1561 tggtcttctc gagctcccgc tggaggtcta ggagctcctg ctggaggcgc agacgggtca
     1621 ccgggtcgac cgctccgaag ggctcgtcca tgaggaggac cggcgggtcg ccgccgaggg
     1681 cgcgggccac gcccacccgt tgccgttccc cgccggacag ctcgtggggg aagcgcttgc
     1741 cgtactggcc gggatcgagt cccaccagct ccagcagctc gttgacccgc cggtcgaccc
     1801 gcgccttgtc ccacccgagg agcctgggca ccgtggccac gttgtcggcg atccggcggt
     1861 gggggaacag cccgccgtgc tggatcacat agccgatccc ccggcgcagc ttcaccgggt
     1921 ccatctcgag cacgtcgatg tcgtcgatga ggatgcggcc cgaggtgggc tcgatcatgc
     1981 ggttgatcat ccgtagcgtg gtcgtcttgc cgcacccgga gggcccgacg agcacgcaca
     2041 gctcgccgtc gcccacgccg aagctgagct cggccacggc gaccgagtcc ttgccgtagc
     2101 gcttcgacac ccgctcgagc gagatcatgc cagtttggac gttatcgaca actccaggtc
     2161 gtccg
//
LOCUS       DATGJT010000597         4519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_913119, whole genome shotgun sequence.
ACCESSION   DATGJT010000597 DATGJT010000000
VERSION     DATGJT010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4519
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913119"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VKX24_10300"
     CDS             <1..653
                     /locus_tag="VKX24_10300"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLJ08922.1"
                     /translation="AKRLAGLDFRSISFPEAPHVIGLPSIHSRAWDPFFDVCAATEIV
                     VSLHIGTGGFPMLAKDAPAAVPNVMASFNAGYTLTDLLFSGVFARFPGLRTCLAESQL
                     GWIPYVLSRADFVYEEMSGEGFTGIDRAAMPHPPSWYFARNVSVAFFRDPVGLELLDR
                     LGADRVLYETDYPHTDTMWPTCRDDAAAMTAHLDPATAADIVAGNAAKLFRIDVGD"
     gene            685..2301
                     /locus_tag="VKX24_10305"
     CDS             685..2301
                     /locus_tag="VKX24_10305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011724484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HLJ08923.1"
                     /translation="MDLHDPTNGTSQPTRYWTTANIGEAMPDVLSPMCWSFWGPNMEA
                     GARLAYYDFGLLPKGDLGVPCDPNELLVSYFYGRPAMNLDRLRSLFDPIPGMTADDFE
                     RDVCGRVRDGLPPIPKSPQTTLKVIARAPAGMARAGRQVRRLAAEQRAWWEGAVHDGG
                     GLDDPRRLLKESAARFREAFRAHVRARFVLMSFHAQLTKLAEAAGRAELVVRLLAGLG
                     GVTETDVADDLWLVGAGRLSLPDFIRRHGFHGPLEGNVAGASWREDPSAVLPLAKAMA
                     ARPADQRPRQREAAAVAARRAAMDELRAALPRTRRSSVGLLCTAAARSVRTTEVGKAA
                     FLMGLDGGRASARALGRQLRDAGRLDDVDDAFYLTIDELLRPLPDNVMELVRFRRDRR
                     AEYRRYELPLTFTGVPEPTVRVEDLGGAAGDVLTGVAGAPGTVEGTARVVVDPFDAEP
                     LEAGEVLVCRFTDPSWAPLFSLADALVIDIGAAASHGAIVARELGVPCVIGTGDGTRR
                     IRTGDRLRVDGSAGRVEILARAAAAGGGPA"
     gene            2298..3314
                     /locus_tag="VKX24_10310"
     CDS             2298..3314
                     /locus_tag="VKX24_10310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08924.1"
                     /translation="MTLHDGDEVLHDPPDPLPGNWQENLFFICWDAATATGLVAHVQR
                     VPGRDIQAAQVALVVDGEFGSATFGAPYRAGSLVPELCAAPVEPWRRWRLQLDGKGAG
                     GAGPLGFFAAGPGGDVVIAADLTLRSTLPVADFAAGLAAVVEGMRADRSGPQMGDQQH
                     YEQGGTWRGRLRVGGRERETAGLFVRDHSWGIRHEHRDFRAFWTASCLDGGRLFCNAI
                     GIPHGDTVIGVGLVADESGVRTTTRVAADFRPAPGIGSYDRTTVRYGEPLGLTLEAET
                     QCHVPLALPLSGPNRYDNNALSRVRLGAASGFGVMEWAAVLRDDEARRLEPEGPPAPD
                     GRRP"
     gene            3311..>4519
                     /locus_tag="VKX24_10315"
     CDS             3311..>4519
                     /locus_tag="VKX24_10315"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ08925.1"
                     /translation="MRAGAVRRLAGAAFAVAVLAASAGCGTAVSRAEIREAAGLGPAA
                     AGTTAAGAGGVAAGTGAAGAGIAGNPTAGGEAPLAGQPPNGPAGGGSAGTGPAVSGSG
                     GAASVIAGGGPGATTSKGTGSASAGGGTAAASRSASAAGTAKPGTGAGPAGSGAGSAG
                     AVPGGPTPAGCPAPCAPLVIGSVGTWSGIVGQNVVGGLNALRAWVASVNAAGGLSGHA
                     VRLEVADDGTDPARHRALVQEFVERRGVVAFVYNAAVFSGQASVDYLNAHRVPVVGGS
                     GTEPWYTTSPMFFTQIIAGEVAIEATVASYARSAKAAGLTKMGLVTCSDGVQVCEDTA
                     RSVPKYAGRYGVELAYQGKASLAAPDFTANCLAARNAGVQILYLALDANSYQRFGRSC
                     ASVDYHPKYGI"
BASE COUNT          530 a         1718 c         1681 g          590 t
ORIGIN      
        1 aggccaagcg cctggccggc ctcgacttcc ggtcgatctc cttccccgag gccccccatg
       61 tgatcggcct gccgtcgatc cactcccggg cctgggaccc gttcttcgac gtctgcgccg
      121 ccaccgagat cgtcgtgtcg ctccacatcg ggacgggcgg cttccccatg ctggccaagg
      181 acgccccggc cgccgtcccc aacgtcatgg cctccttcaa cgccggctac acgctgaccg
      241 acctcctgtt ctccggcgtc ttcgcccgct tcccgggctt gaggacctgc ctggcggaat
      301 cgcagctcgg ctggatcccc tacgtgctgt cccgggccga cttcgtctac gaggagatga
      361 gcggcgaggg cttcaccggc atcgaccggg cggcgatgcc ccacccgccg agctggtact
      421 tcgcccgcaa cgtctcggtg gcgttcttcc gggaccccgt cggcctcgaa ctcctcgacc
      481 ggctcggagc cgaccgggtg ctctacgaga cggactatcc ccacaccgac acgatgtggc
      541 cgacgtgtcg cgacgacgcc gcggcgatga ccgcccacct cgacccggcc accgccgccg
      601 acatcgtggc cggcaacgcc gccaaactgt tccgtatcga cgtcggcgac tagccgccgg
      661 ccagccatcg cgtccggggg gacgatggac ctgcacgatc cgaccaacgg cacgtcgcag
      721 ccgacgcgct actggacgac ggccaacatc ggcgaagcca tgcccgacgt cctgtcgccg
      781 atgtgctgga gcttctgggg ccccaacatg gaggccgggg cccggctggc ctactacgac
      841 ttcggcctcc tgccgaaggg cgacctcggg gtgccgtgcg atcccaacga gctgctggtg
      901 tcgtacttct acggccggcc ggccatgaac ctcgaccgcc tccgcagcct gttcgacccc
      961 atcccgggga tgacggccga cgacttcgag cgcgacgtct gcggccgggt gcgggacggg
     1021 ctgccgccca tcccgaagag cccgcagacg acgctcaagg tcatcgcccg ggcccccgcc
     1081 ggcatggccc gggccggccg gcaggtccgc cgcctggccg ccgagcagcg ggcgtggtgg
     1141 gaaggggcgg tgcacgacgg gggcgggctc gacgaccccc ggcggctgct caaggagtcg
     1201 gcggcccggt tccgggaggc gttccgggcc cacgtccggg cccggttcgt gctgatgtcg
     1261 ttccacgccc agctcacgaa gctggccgag gccgccggcc gcgccgaact cgtcgtccgg
     1321 ctgctggcgg ggctcggcgg ggtgaccgag accgacgtgg ccgacgacct gtggctggtc
     1381 ggcgccgggc ggctctccct tcccgacttc atccgccgcc acggcttcca cggcccgctg
     1441 gagggcaacg tggccggcgc ttcgtggcgc gaggacccct cggccgtgct gcccctggcc
     1501 aaggccatgg ccgcccgccc ggccgaccag cggccccggc agcgggaggc ggccgcagtc
     1561 gccgcccgcc gggcggcgat ggacgaactg cgggcggcgc tcccccgcac caggcggtcc
     1621 tcggtcgggc tgctgtgcac cgccgccgcc cgctcggtgc ggacgaccga ggtcggcaag
     1681 gccgccttcc tcatgggcct cgacggcgga cgggcctccg cccgggccct cggccgtcag
     1741 ctccgagacg ctgggcggct cgacgacgtc gacgacgcct tctacctgac gatcgacgag
     1801 ctcctcaggc cgttgcccga caacgtgatg gagctcgtgc gcttccggcg ggaccggcgg
     1861 gcggagtacc gccgctacga gctgccgctg accttcaccg gtgtgccgga accgaccgtc
     1921 cgggtggaag acctgggcgg ggcggcgggc gacgtcctca ccggcgtggc cggggccccc
     1981 gggacggtgg agggcacggc ccgggtggtc gtcgatccct tcgacgccga accgctggag
     2041 gccggcgagg tcctcgtctg ccgcttcacc gatccgagct gggcgccgct gttctcgctc
     2101 gccgacgccc tcgtcatcga catcggcgcc gccgccagcc acggcgccat cgtggcccgg
     2161 gaactcggcg tcccctgtgt catcggcacc ggcgacggca cccggcggat ccgcaccggc
     2221 gaccggctgc gggtcgacgg ctcggccgga cgggtggaga tcctggctcg cgccgccgcc
     2281 gcgggaggcg gcccggcgtg acgctgcacg acggcgacga agtgctccac gacccgccgg
     2341 atcccctgcc ggggaactgg caggagaacc tgttcttcat ctgctgggac gctgcgaccg
     2401 ccaccgggct cgtcgcccac gtgcagcggg tgcccggccg ggacatccag gcggcgcagg
     2461 tggcgctggt cgtcgacggg gagttcggct cggcgacctt cggcgctccc taccgggcgg
     2521 gttcgctcgt cccggagctg tgcgccgcac cggtcgagcc gtggcggcgc tggcggctgc
     2581 agctcgacgg caagggcgcc ggcggagcgg gcccgctcgg gttcttcgcc gccgggcccg
     2641 gcggcgacgt cgtcatcgcc gccgacctga cgctgcggag caccctgccg gtggccgact
     2701 tcgccgccgg gctggccgcc gtcgtcgagg ggatgcgggc cgaccgctcc ggaccccaga
     2761 tgggcgacca gcagcactac gagcagggcg gcacgtggcg gggccgcctc cgggtcggcg
     2821 gccgggagcg ggagaccgcc gggctgttcg tgcgggacca ctcgtggggc atccgccacg
     2881 agcaccggga ctttcgggcg ttctggacgg cgtcgtgcct cgacggcggc cgcctgttct
     2941 gcaacgccat cggcatcccg cacggcgaca ccgtgatcgg cgtcggcctg gtggccgacg
     3001 agtccggcgt gcggacgacg actcgggtgg cagccgactt ccggccggcg ccggggatcg
     3061 ggagctacga ccggacgacg gtgcgctacg gcgagccgct ggggctgacg ctggaggccg
     3121 agacgcagtg ccacgtcccg ctggccctcc ccctgtcggg ccccaaccgc tacgacaaca
     3181 acgccctgtc ccgggtgcgg ctgggggccg cctccggctt cggcgtgatg gagtgggccg
     3241 cggtgttgcg cgacgacgaa gcccggcggc tggagcccga ggggccgccg gcgcccgacg
     3301 ggcggcggcc gtgagggccg gagcggtgcg ccggctcgcc ggtgcggcgt tcgccgtcgc
     3361 cgtcctcgcc gcctcggcgg ggtgcggcac ggccgtgtcc cgggccgaga tccgcgaggc
     3421 ggccggcctc ggcccggcgg ccgccggcac caccgcggcc ggcgccggcg gcgtggcggc
     3481 cgggaccggg gcggccggtg cgggaatcgc cggtaacccg accgccggtg gcgaagcgcc
     3541 tctcgccggt cagcccccga acgggcccgc cggcggcggg tcggccggga ccggcccggc
     3601 ggtgtcgggg tcgggcggcg cggcgtcggt tatcgccggc ggcgggccgg gggcgacgac
     3661 gtcgaagggc accgggagtg cgtcggccgg cggcggaacg gcggcggcgt cccgatcggc
     3721 gtcggcggcg ggaacggcga aaccgggcac cggagcgggc ccggcggggt cgggtgccgg
     3781 ctcggcgggc gccgttcccg gtggtccgac gccggccggg tgcccggcgc cctgtgcgcc
     3841 cctggtcatc ggctcggtcg ggacgtggtc gggcatcgtc ggccagaacg tcgtcggggg
     3901 cctcaacgcc ctgcgggcct gggtggcatc ggtcaacgcc gccggcgggc tgtccggtca
     3961 tgccgtccgc ctggaggtgg ccgacgacgg caccgacccc gcccggcacc gggccctggt
     4021 gcaggagttc gtcgaacgcc ggggggtcgt ggccttcgtc tacaacgccg ccgtcttctc
     4081 cggccaggcc agcgtcgact acctcaacgc ccaccgcgtc ccggtcgtcg gcgggtcggg
     4141 caccgagccg tggtacacga cgagcccgat gttcttcacc cagatcatcg ccggcgaggt
     4201 ggccatcgag gccacggtgg ccagctacgc ccgctcggcc aaggccgccg ggctcacgaa
     4261 gatgggcctc gtcacctgca gcgacggcgt ccaggtgtgc gaggacaccg cccgctcggt
     4321 cccgaagtac gccggccggt acggcgtcga actcgcctat cagggcaagg cgtcgctggc
     4381 cgcccccgac ttcacggcca actgcctcgc cgcccgcaac gccggcgtcc agatcctcta
     4441 cctggccctc gacgccaact cctaccagcg gttcggtcgc tcctgcgcca gcgtcgacta
     4501 ccacccgaag tacggcatc
//
LOCUS       DATGJT010000598         2785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_703775, whole genome shotgun sequence.
ACCESSION   DATGJT010000598 DATGJT010000000
VERSION     DATGJT010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703775"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2742
                     /locus_tag="VKX24_10320"
     CDS             <1..2742
                     /locus_tag="VKX24_10320"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLJ08926.1"
                     /translation="APSLRWLGRVAVWATELVAQGRVVPTLVEANPNGSGGKAGRAST
                     GEYMVRWAPAVLDADRLKECVSKMPGAVSALEQAGQPYRMCRAVLGAAADAVCRAGAG
                     RLVTPATVPVARSRSEVSEAVLAGLAGKPFTAAVRAASEMADDMARWTTPVTSDRAAR
                     LIVRLAPPEDDGGWLLTVEANEPDPDGGGASGGGPSGGGTVPLPVEEVLHSGRPARAA
                     AVETELRRLERLLPALRRPGRRRGRVVMDGTEAWELMTVGGAVLEAAGFTVRVPLLAK
                     KRSTPRLQLHAEALGGESVVGAQQLSRVQWSVAVDDVTLDAAAIRKLALQARPLVQTK
                     GGWVELDKADLEAAAEALADRSKRTEMSGAEILRHAVGLEGGIGGPVLVDGGGWAVDL
                     VRGAAAGAARPLPAPEGFEGELRHYQAEARGWLGFLDRAGLGGCLAMDMGLGKTPTVL
                     AHLLEHKADGPSLVIAPPAVLGNWAAEAARFTPELVVRMHHGADRASGAEEVAAEVAE
                     ADVVLTTYATAVRDVDELAKVEWARLIVDEAQAIKNPASDTAQELRRLPARSRLALTG
                     TPVENGLGDLWSILDFTNPGLVGPRNVFVEALSRPRAIVSAEGSAGGSGAAKTGEQAL
                     RALNGLLVFRRTKAEPEIAAELPDKIDELDHCAMTPEQVGLYQAVLDNLLATNTGASA
                     EDDSTARKGHVLAAITHLKQICDHPAAYVDGDDGPLDGRSGKLARLEELIEAVFEAGE
                     RMLVFTHFARWGERLARHLTKKTGLPIACYHGGLTRTQRDRLVKEFQEGAGPGALVVS
                     IKAGGTGLNLTAASHVVLYDRWWNPAVEDQARDRAWRIGQAHTVICHRLVCPGTVDER
                     VEEVVAGKRRIADLVLPASSSLGDLSAEELRTALGLRPDAIVEEVGRDAGADDEEAA"
BASE COUNT          350 a         1036 c         1080 g          319 t
ORIGIN      
        1 gccccgagcc tgcgctggct cggccgggtg gcggtctggg ccaccgagct cgtggcccag
       61 ggccgggtcg tgccgacgct ggtggaggcc aatcccaacg gcagcggcgg caaggccggg
      121 cgggcctcga cgggcgagta catggtccgc tgggcgccgg ccgtgctgga cgccgaccgg
      181 ctgaaggagt gcgtgtcgaa gatgcccggg gcggtttcgg ccctggagca ggccggccag
      241 ccctaccgga tgtgccgggc cgtgctcggc gccgccgccg acgccgtctg ccgggccggc
      301 gccggccgcc tggtcacgcc ggccaccgtg ccggtggccc gatcccgctc cgaggtgtcg
      361 gaggcggtgc tggccgggct ggccggcaag ccgttcaccg ccgccgtccg ggcggcgtcg
      421 gagatggccg acgacatggc ccggtggacg acgccggtca ccagtgaccg ggccgcccgc
      481 ctcatcgtcc gcctcgcccc tccggaggac gacggcggct ggctgctcac cgtcgaggcc
      541 aacgagcccg accccgacgg cggaggggcg tcaggaggtg ggccgtccgg cgggggaacg
      601 gtcccgctgc cggtggaaga ggtgctccac agcgggcgtc cggcccgggc ggcggcggtg
      661 gagaccgagc tgcgccggct ggagcggctg ctgccggcac tgcgccggcc cggtcggcgc
      721 cggggccggg tcgtcatgga cggcaccgag gcctgggagc tcatgaccgt cggcggcgcc
      781 gtcctcgagg cggccggctt caccgtgcgg gtgccgctcc tggccaagaa gcgctcgacc
      841 ccccgcctcc agctccacgc cgaggcgctg ggcggcgagt cggtggtcgg ggctcagcag
      901 ctgtcccggg tgcagtggtc ggtggcggtc gacgacgtga ccctcgacgc cgccgccatc
      961 cgcaagctgg ccctccaggc ccggccgctg gtccagacca agggcggctg ggtggagctg
     1021 gacaaggccg acctggaggc ggcggccgag gcgctggccg atcggtcgaa gcgcaccgag
     1081 atgtcgggcg ccgagatcct ccgccacgct gtcggcctcg agggcggcat cggcggcccg
     1141 gtcctggtcg acggcggcgg ctgggccgtc gacctggtgc ggggagcggc ggccggggcg
     1201 gctcgccccc tgccggcgcc ggaggggttc gagggcgagc tgcgccacta ccaggccgag
     1261 gcccggggct ggctggggtt cctcgaccgg gccgggctcg gcggctgcct ggccatggac
     1321 atggggctcg gcaagacccc caccgtcctc gcccacctgc tggagcacaa ggcggacggg
     1381 ccgtcgctgg tgatcgcccc gccggccgtg ctcggcaact gggcggcgga ggccgcccgg
     1441 ttcacgccgg agctggtcgt ccggatgcac cacggcgccg accgggcgtc gggagccgag
     1501 gaggtggcgg ccgaggtggc cgaggccgac gtcgtgctca ccacctacgc caccgccgtg
     1561 cgcgacgtcg acgagctggc caaggtggag tgggcccggc tgatcgtcga cgaggcccag
     1621 gccatcaaga acccggccag cgacaccgcc caggagctgc gccggctgcc ggcccggagc
     1681 cgcctggccc tcaccggcac gccggtggag aacggcctcg gcgacctgtg gtcgatcctc
     1741 gacttcacca accccggcct ggtcgggccc cgcaacgtct tcgtcgaggc gctgtcccgg
     1801 ccccgggcga tcgtctccgc cgagggctcc gcgggtggca gcggggcggc caagaccggc
     1861 gagcaggcgc tgcgggcgct caacggcctc ctggtcttcc gccgcacgaa ggcggagccc
     1921 gagatcgccg ccgagctgcc ggacaagatc gacgagctcg accactgcgc catgaccccg
     1981 gagcaggtcg ggctgtacca ggccgtcctc gacaacctgc tggccaccaa caccggcgcc
     2041 tcggccgagg acgactccac cgcccgcaag ggccacgtcc ttgccgccat cacccacctc
     2101 aagcagatct gcgaccaccc cgccgcctac gtcgacggcg acgacggccc gctcgacggc
     2161 cgctccggca agctggcccg gctggaggag ctgatcgagg cggtgttcga ggccggcgag
     2221 cggatgctcg tcttcaccca cttcgcccgc tggggggagc ggctggcccg ccacctcacg
     2281 aagaagaccg gcctgccgat cgcctgctac cacggcggcc tcacccggac ccagcgcgac
     2341 cgcctcgtca aggagttcca ggagggcgcc gggccggggg cgctggtggt gtcgatcaag
     2401 gccggcggca ccgggctcaa cctgaccgcc gccagccacg tcgtcctcta cgaccggtgg
     2461 tggaacccgg cggtggagga ccaggcccgg gaccgggcct ggcggatcgg ccaggcccac
     2521 acggtcatct gccaccgcct cgtctgcccc ggcaccgtcg acgaacgggt cgaggaggtc
     2581 gtggccggca agcggcgcat cgccgacctg gtgctgccgg ccagcagctc gctcggcgac
     2641 ctctcggccg aggagctccg caccgccctc gggctgcggc ccgatgccat cgtcgaagaa
     2701 gtcgggcggg acgccggcgc cgacgacgag gaggcggcgt gacgcccgat cgggccggcg
     2761 gtgccggcgg gagcgccggc ggcaa
//
LOCUS       DATGJT010000599         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_492266, whole genome shotgun sequence.
ACCESSION   DATGJT010000599 DATGJT010000000
VERSION     DATGJT010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492266"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VKX24_10325"
     CDS             complement(<1..941)
                     /locus_tag="VKX24_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012163709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HLJ08927.1"
                     /translation="MDGAASRWVKVDADGLTEGQVTTVVAGGRAVCLTRTAEGYGALD
                     NRCPHQGGPLGDGQIEDGWLVCPWHAYQYGPCDGKPPPGFGDAAVAYAVEERADGLWV
                     EVPDEAEAPSLMDQVVGTLCDWGLEAVFGMVGHSNLGLADALRRAAEAGRLTYVGIRH
                     EGAAAFAASGYAKLTGRPAACFSIAGPGATNLLTGLWDAKVDRVPILALTGQVQTQVL
                     GPGAFQEVPLSEAFAAVAEWTQTVLRPGNATELAALAMKHAVVQRDVAHLVFPDEVQE
                     LPALDGAPGRPRRGRVAESAIAPPEDELDRAVSLLAGA"
     gene            complement(1001..>2005)
                     /locus_tag="VKX24_10330"
     CDS             complement(1001..>2005)
                     /locus_tag="VKX24_10330"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase early set domain-containing
                     protein"
                     /protein_id="HLJ08928.1"
                     /translation="TNHFTKGQLNNRRWFSDGTILPDGTVLATAGGDKDSLQMPGYEI
                     AVRQSEIYDPATDTWKAVASQARDRHYHETATLLPDGRVLAGGMSSVATLYGHRRDQG
                     NGFFANNEKDSSFEIYSPPYLFRGPRPEITFAPSGVAWGSQFKINMAGSDEIASVALI
                     RTGSPQHGLDTDERSVELPFKQDGNTLTASAPPNGAVAPPGYYYLFVNKKSPKGPIPS
                     VAAMVRVGDLVTATALGNSPAAIPMHDSSVAGNNGSATPDENSSMNDFGECTGCAKGQ
                     RGGMRHDLQQSNPALQQVPIGADDDGPAQRAQHQMTSMQVPDVNPRTTFRFTRPMLVG
                     "
BASE COUNT          254 a          708 c          736 g          307 t
ORIGIN      
        1 gcgcccgcca gcaacgaaac cgcccggtcg agttcgtcct ccggcggggc gatcgccgac
       61 tccgccaccc ggccccgccg gggtcggccg ggggcgccgt cgagcgccgg cagctcctgc
      121 acctcgtcgg ggaacaccag atgggcgacg tcgcgctgca cgacggcgtg cttcatggcc
      181 agcgccgcca gctccgtggc gttgcccggc cggagcaccg tctgggtcca ttcggccacg
      241 gcggcgaacg cctccgacag cggcacctcc tggaaggccc ccgggccgag cacctgggtc
      301 tgcacctggc cggtcagggc caggatcggc acccggtcga ccttggcgtc ccacaggccg
      361 gtgagcaggt tggtggcgcc gggcccggcg atggagaagc aggccgccgg ccggccggtg
      421 agcttggcgt agccgctggc ggcgaaggcc gccgctccct cgtggcggat gccgacgtag
      481 gtcagccggc cggcctcggc cgcccgccga agggcgtcgg ccaacccgag gttggagtgg
      541 ccgaccatgc cgaacaccgc ttccagcccc cagtcgcaga gcgtgccgac gacctggtcc
      601 atcagcgacg gcgcctcggc ctcgtcgggc acctccaccc acagcccgtc cgcccgctcc
      661 tccaccgcgt aggcgacggc ggcgtcgccg aagcccggcg gcggcttccc gtcgcacggc
      721 ccgtactggt aggcgtgcca ggggcagacc agccagccgt cttcgatctg gccgtcgccc
      781 agcgggccgc cctggtgggg gcagcggttg tcgagcgcgc cgtagccctc agcggtgcgg
      841 gtcaggcaca cggcccgccc gccggcgacg accgtcgtca cttgcccctc ggtgaggccg
      901 tcggcgtcga ccttcaccca acgcgatgct gcgccgtcca tgaacgcccc ctctctcggg
      961 gacagtatgg acggcgcagc gtcgcgttac agccggtcgc tcagccgacg agcatgggcc
     1021 tcgtgaagcg gaaggtcgtc ctcgggttga cgtccggtac ctgcatggag gtcatctggt
     1081 gctgcgcccg ttgcgccggc ccgtcgtcgt cggccccgat cggaacctgc tgcagcgccg
     1141 ggttcgactg ctggaggtcg tggcgcatcc cgccccgctg gcccttggcg cagccggtgc
     1201 actcgccgaa gtcgttcatc gagctgttct cgtcgggtgt ggccgagccg ttgttgccgg
     1261 ccacggatga gtcgtgcatg ggaatggccg ccgggctgtt gccgagagcg gtggcggtca
     1321 ccaggtcgcc gacccggacc atcgccgcca cggacgggat cgggcccttg ggggacttct
     1381 tgttgacgaa caggtagtag tagccgggcg gagcgacggc accgttgggc ggagcgctgg
     1441 ccgtcagcgt gttgccgtcc tgcttgaacg gcagttcgac cgaccgctcg tcggtgtcga
     1501 ggccgtgctg cggggagccc gtgcggatca gggcgacgct ggcgatctcg tccgagccgg
     1561 ccatgttgat cttgaactgc gagccccacg ccacccccga cggggcgaac gtgatctccg
     1621 gccgcggccc ccggaacagg tagggcgggc tgtagatctc gaagctcgag tccttctcgt
     1681 tgttggcgaa gaagccgttg ccctggtcgc ggcggtggcc gtagagcgtg gccacgctcg
     1741 acatcccacc ggcgaggacg cggccgtcgg gcagcagggt cgccgtctcg tggtaatgcc
     1801 ggtcacgggc ctgggaggcg acggccttcc acgtgtcggt ggccgggtcg tagatctccg
     1861 actggcggac ggcgatctcg taaccgggca tctgcagcga gtccttgtcg cccccggcgg
     1921 tggcgaggac ggtcccgtcg ggaaggatcg tcccgtcgct gaaccaccgg cggttgttga
     1981 gctggccctt ggtgaagtgg ttggt
//
LOCUS       DATGJT010000600         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_395350, whole genome shotgun sequence.
ACCESSION   DATGJT010000600 DATGJT010000000
VERSION     DATGJT010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395350"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VKX24_10335"
     CDS             complement(<1..278)
                     /locus_tag="VKX24_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013270554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HLJ08929.1"
                     /translation="MLPLMVVRATFRGTVIAESEDTVVVEGNHYFPPDAVNPVYLEPS
                     EHHTTCSWKGVASYHHVVVDGERASDAAWYYPDPKDAALEIKDRIAFWR"
     gene            407..1651
                     /gene="egtB"
                     /locus_tag="VKX24_10340"
     CDS             407..1651
                     /gene="egtB"
                     /locus_tag="VKX24_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011755100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HLJ08930.1"
                     /translation="MAHVESEILSIDLAQRYREVRDRTELLAAPLTPEDQMVQSMADA
                     SPTKWHRGHTTWFFEAFVLPRERPGLAVFDPDFAFLFNSYYEAVGPRQPRDRRGMVSR
                     PSCEEVAAYRAHVDAAMGEVLDGAVSDPTRALVELGINHEQQHQELLLMDIKHALFSN
                     PLEPAYLPAEGPPLAVSNRLGWAVHDGGRVEVGRKGDGFCFDNEKPGHAELLPPFGLA
                     DRLVTCGEWLEFMDDGGYRRPELWLSDGWATVTREGWDAPLYWAGHGGEWSLFTLMGR
                     RLLNESEPVCHVSYYEADAFARWRGFRLPTETEWEAVAAGFAPDGLALRLHPVPGDRG
                     FGDLYGQVWQWTASAYGPYPGFRPAPGAVGEYNGKFMVNQQVLRGGACITPEGHTRAT
                     YRNFFPPGSRWAFTGVRLARDL"
     gene            complement(1689..>2078)
                     /locus_tag="VKX24_10345"
     CDS             complement(1689..>2078)
                     /locus_tag="VKX24_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005268945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0140737 - encapsulin nanocompartment
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 encapsulin nanocompartment shell
                     protein"
                     /protein_id="HLJ08931.1"
                     /translation="PPVTLSGDYAQYPGDVARAVETLLEAGVQGPYGLALGPDAYTGV
                     VETTEHGGILVFDHLRQILGGPIVWAPGVDGAVVVSQRGGDFLFESGEDLAVGYDRHD
                     AERAYLYFEESFTFHVASPEAGIALAA"
BASE COUNT          282 a          750 c          743 g          303 t
ORIGIN      
        1 cgccagaagg cgatgcggtc cttgatctcc agcgcggcgt ccttcgggtc cgggtagtac
       61 caggcggcgt cggacgcccg ctcgccgtcg acgacaacgt ggtgatagct ggcgacgccc
      121 ttccacgagc aggtggtgtg atgctcgctc ggctcgaggt acaccggatt gaccgcgtcc
      181 ggggggaagt agtggttgcc ctccacgacc acggtgtcct cgctctcggc gatcaccgtg
      241 ccccgaaagg tcgcccggac caccatgagc gggagcatac cgatcccatc cctcggcggg
      301 accgcacgcc ggcccgcaac ccagccgtcc cgccggcgcc actaccgttg tcaacgcggc
      361 ggagcccccg tctcgggttg gcggccggtc ggccacggag gtggcgatgg cccacgtgga
      421 gagcgagatc ctctcgatcg acctcgctca gcgctaccgg gaggtccggg accggaccga
      481 gctgctcgcg gccccgctca cccccgagga ccagatggtc cagtcgatgg cggacgccag
      541 cccgaccaag tggcaccgtg ggcacaccac gtggttcttc gaggcgttcg tcctgccgag
      601 ggagcgcccc ggcctcgccg tcttcgaccc ggacttcgcc ttcctcttca actcgtacta
      661 cgaggccgtc gggccccgcc agccgcgcga ccggcggggc atggtctcgc gtccgtcgtg
      721 cgaggaggtc gccgcctacc gcgcccacgt ggatgcggcg atgggcgagg tgctcgacgg
      781 ggccgtctcg gatccgacgc gcgccctggt cgagctcggc atcaaccatg agcagcagca
      841 ccaggagctg ctgctcatgg acatcaagca cgcgttgttc agcaacccgc tcgagcccgc
      901 gtacctcccc gccgagggcc cgccgctcgc cgtgtcgaac cggctcggat gggcggtcca
      961 cgacggtggc cgggtggagg tggggcgcaa gggtgacggc ttctgcttcg acaacgagaa
     1021 gccgggccac gccgaactgc tgccgccctt cggcctcgcc gaccgcctcg tgacctgtgg
     1081 ggaatggctc gagttcatgg acgacggcgg ctatcggcgc cccgagctgt ggctctccga
     1141 cgggtgggcg acggtgaccc gcgagggttg ggacgctccc ctctactggg ccgggcacgg
     1201 tggcgagtgg tccctcttca ccctcatggg gcgtcgtctc ctcaacgaga gcgagccggt
     1261 ctgccacgtg agctactacg aggccgacgc ctttgcccgc tggcgcgggt tccgcctccc
     1321 gaccgagacc gagtgggagg cggtggcggc cggcttcgcc cccgacggtc tggccctccg
     1381 cctgcacccg gttcccggcg accgcgggtt cggcgacctc tacggccagg tctggcagtg
     1441 gaccgccagc gcgtacggcc cgtacccggg gttccgtccc gctcccggcg cggtcggcga
     1501 gtacaacggg aagttcatgg tcaaccagca ggtgctgcgg ggtggcgcct gcatcacgcc
     1561 ggagggccac acgagggcga cctaccgcaa cttcttcccg cccggttcgc gctgggcctt
     1621 caccggggtg cgcctggccc gcgacctctg agcggtgacg ggggcggccg ggccgctccg
     1681 aacccgcgtc aggcggcgag ggcgatgccg gcttcggggg aggcgacgtg gaaggtgaag
     1741 ctctcctcga agtacaggta ggcccgctcg gcgtcgtggc ggtcgtagcc gaccgcgagg
     1801 tcctcgcccg actcgaagag gaagtcccct ccccgctgcg acacgacgac ggcgccgtcc
     1861 acgccggggg cccagacgat ggggccgccc aggatctggc gcaggtggtc gaagaccagg
     1921 atgccgccgt gctcggtcgt ctccaccacc ccggtgtagg cgtcggggcc gagggccagc
     1981 ccgtaggggc cctgcacccc ggcctcgagc agcgtctcga cggcgcgggc gacgtctccc
     2041 gggtactgcg cgtagtcacc cgagagcgtg accggcgg
//
LOCUS       DATGJT010000601         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_810349, whole genome shotgun sequence.
ACCESSION   DATGJT010000601 DATGJT010000000
VERSION     DATGJT010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_810349"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VKX24_10350"
     CDS             complement(<1..224)
                     /locus_tag="VKX24_10350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08932.1"
                     /translation="MLAAAPQLLNHPVDVIVRSLPWWFFMIVHIALFVIGAYFALRAF
                     EAAEQGFGWGFTLFALAEISYMTYHVNITN"
     gene            complement(196..423)
                     /locus_tag="VKX24_10355"
     CDS             complement(196..423)
                     /locus_tag="VKX24_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08933.1"
                     /translation="MGFALIAVGALVDTAYHVWWAGDDRHAGVGLLGHLITLAGMVVT
                     IAAVVARGLSTSARPPLLKGDPDAGRSASAS"
     gene            552..941
                     /locus_tag="VKX24_10360"
     CDS             552..941
                     /locus_tag="VKX24_10360"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLJ08934.1"
                     /translation="MRRVVVLAVCAAAGLGVLGGCGSGSGSGSGPSDRSSNGSVGGQT
                     LEAVDNAFRPAQLTVPAGQKVTVVLKNDGATLHNFSIDALGVSQDVEAGKKATITFTP
                     TSPGSLQFYCKYHQALGMTGTVTVTGS"
     gene            complement(987..1109)
                     /locus_tag="VKX24_10365"
     CDS             complement(987..1109)
                     /locus_tag="VKX24_10365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08935.1"
                     /translation="MTGNLPLFRAAGVVGFVIALVGFFGAVAPLLEDSAGTRWS"
     gene            complement(1321..1393)
                     /locus_tag="VKX24_10370"
     tRNA            complement(1321..1393)
                     /locus_tag="VKX24_10370"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1358..1360),aa:Phe,seq:gaa)
     gene            complement(1433..1507)
                     /locus_tag="VKX24_10375"
     tRNA            complement(1433..1507)
                     /locus_tag="VKX24_10375"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1470..1472),aa:Asp,seq:gtc)
     gene            complement(1547..1619)
                     /locus_tag="VKX24_10380"
     tRNA            complement(1547..1619)
                     /locus_tag="VKX24_10380"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1583..1585),aa:Glu,seq:ttc)
     gene            complement(1643..>2079)
                     /locus_tag="VKX24_10385"
     CDS             complement(1643..>2079)
                     /locus_tag="VKX24_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020547109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ08936.1"
                     /translation="RVHRHGRAISIAAVLWGLAIVGFGLAPWLWLALLGLAAAGAADM
                     VSGIFRMTMWNQTIPDHLRGRLASIELLSYTSGPLLGNAEAGAAASLLGVRASVVSGG
                     ALCVVAVAGTAAALPAFRAYDAHRERAAGGPRSPAGEGSLLP"
BASE COUNT          344 a          712 c          729 g          294 t
ORIGIN      
        1 aagttcgtga tgttgacgtg gtacgtcatg taggagatct cggccagggc gaagagggtg
       61 aacccccagc cgaagccttg ctcggcggcc tcgaaggccc ggagggcgaa gtaggccccg
      121 atcacgaaca gggcgatgtg aacgatcatg aagaaccacc agggaaggct gcggacgatg
      181 acgtccaccg ggtggttaag aagctgaggc gctgcggcca gcatcagggt ctcctttcag
      241 caggggcggg cgggcggacg tgctgagccc cctggccacg acggcggcga tggtgacgac
      301 catcccggcc agcgtgatca gatggccgag gaggccgacg ccggcgtggc ggtcgtcacc
      361 cgcccaccac acgtggtagg cggtgtcgac gagcgctccg acggcgatga gggcgaagcc
      421 catccgtccg cttctaaaag ataacatcgc tttcaattaa gcactgctcg atgtgggttg
      481 caagtgctcg cttgcctttg ctctataaaa agtctatatc tgttctagag agccactgaa
      541 ggagggtcga tatgcgacgc gtcgtcgtcc tcgccgtctg cgccgccgcc ggtctcggcg
      601 tgctcggcgg ctgcggctcg gggtccggtt cgggttccgg gccctccgac cggagcagca
      661 acggctcggt cggcggccag accctggagg cggtcgacaa tgccttcagg ccggcccagt
      721 tgaccgtccc ggcggggcag aaggtgaccg tcgtgctgaa gaacgacggc gccaccctgc
      781 acaacttctc gatcgacgcc ctcggggtca gccaggacgt cgaagcgggg aagaaggcga
      841 cgatcacctt caccccgacg tcgcccggca gcctgcagtt ctactgcaag taccaccagg
      901 cgctcggcat gaccggcacg gtcaccgtca ccggcagttg accggtctcg ctccggatcg
      961 gctccgggtc gtccggtggc ccgccgctaa ctccaccggg tgccggcgga gtcttccagc
     1021 aggggggcga ccgcgccgaa gaacccgacg agggcgatga cgaagcccac gacgccggcg
     1081 gcccggaaga gcgggaggtt gccggtcacc tcgtagaccc ggccagtacc gtccgcaccg
     1141 ccgcggtcag caggagtgcc gcaagcagcg gctgaccccg gacggcgacg acgccgagca
     1201 gcaatccgtc ccgggcccgc cgcgtggccg aaccgtcttg acgaggcggc ccgccgggcc
     1261 cccttccgaa cgcgacgcag gtcagcggat tttatacccg ctgacctgcg cttttggctg
     1321 tggccgggat cggcgtcgat ccgatgacct cgcgcttttc aggcgcgcgc tctgccgact
     1381 gagctacccg gccgatgccg atgagggctg gggtcggccg accctcatcg agcggtccag
     1441 acgggacttg aacccgcgac ctccgccttg acagggcggc gtgctaaccg gactgcacca
     1501 ctggaccatg tgttcgactg ctcgtgaaac ccccctcggg ggctcgcacc cccaacggga
     1561 ttcgaacccg tgctaccgcc ttgaaagggc ggcgtcctgg gccgctagac gatgggggcc
     1621 cgttccctct cggtgaaccg gatcatggta gcagtgaccc ctccccggcc ggactcctcg
     1681 ggccgcccgc cgcccgctcc cggtgggcgt cgtaggcccg gaaggcgggg agggcggcgg
     1741 cggtgccggc cacggccacc acgcacagcg cgccgccgga tacgaccgag gcccgcacgc
     1801 cgagcagcga ggccgccgcc ccggcctcgg cgttgccgag gagcgggccc gatgtgtagc
     1861 tcagcagctc gatcgaggcc aggcggcccc ggaggtggtc gggaatcgtc tggttccaca
     1921 tcgtcatccg gaagatcccg ctgaccatgt ccgcggcgcc ggcggcggcg aggccgagca
     1981 gggccagcca cagccacggg gccagcccga atccgacgat ggccaggccc cagaggacgg
     2041 cggcgatgga gatggcccgg ccgtgccggt gcacccggc
//
LOCUS       DATGJT010000602         2719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_600269, whole genome shotgun sequence.
ACCESSION   DATGJT010000602 DATGJT010000000
VERSION     DATGJT010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600269"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1465)
                     /locus_tag="VKX24_10390"
     CDS             complement(<1..1465)
                     /locus_tag="VKX24_10390"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLJ08937.1"
                     /translation="MSGRGRTLLVGLVLLGLMAAGVAVLGAQTAPAAAVPVPRLDLGT
                     EHYRLGNGLEVILRRETRLPVVAVNLWYHVGPANEVPGRTGFAHLFEHMMFEGSGHVA
                     EGEADRLLEAAGTSENASTHFDYTNYIIPDVPANQLDLALWIQSDRMGFLLDRLDQAS
                     LSNQQAVVRNERRERYDDAPYGLADEEVYHRLFPPGHPYHPDVIGSHADIQSARLDDV
                     RDFFRHYYVPNNASLAIVGDIDVARTKAMVEKYFGTIPRGPDVTRRIVPAPPLTGEQR
                     VAVTDAVELPRVTMAWLSPPIFQPGDYDAIVTRRLLDGTRASRLTRRLVHDLRIAQSV
                     EADVESLADGSVFTVTATAKPGHNLGELETAIDAELADLARRGPTRSEVEAAETALVA
                     HSVADLDDIGNFGGFADQLNYYNHYLGDPDHINDDLRRTAAVTPDRVRRFVAGQLDPR
                     RRVVVEVTPGPRTPVDDPPAPPAPAKSSGAAPPASAEP"
     gene            complement(1518..2366)
                     /locus_tag="VKX24_10395"
     CDS             complement(1518..2366)
                     /locus_tag="VKX24_10395"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HLJ08938.1"
                     /translation="MLCDQCGADIPAGSRFCPRCGRAAPGAEGPPNPTVPPANPGGLP
                     PTPPTMPPPPPPPPSYGAGAPPPSGGYGAPPPPPAPPPGYAPPGGYPSPPPAYYGAAP
                     GMGVGSGPVSYGLASLGQRLGGYLIDVVIVGAVFIFGLIVMAASTPASNFDNPDPSPN
                     GVAILVFLLCGLAAFVYYPFFEGRPAGQTLGKKAVGIRVVRQSNGAPLGYGLAIWRTV
                     VRIVDYLPFYLGLLWAIWDPQHQTFHDKIAGTLVVRSDVYPAPGAPAPAGYQQPAPPP
                     SPYQTG"
     gene            2510..2704
                     /locus_tag="VKX24_10400"
     CDS             2510..2704
                     /locus_tag="VKX24_10400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08939.1"
                     /translation="MNKLDEDLVRDTVCGLELQLIDAVERQERAEIQDDSQEADRLQE
                     EIDGLQSRLAAVAEVVATLD"
BASE COUNT          370 a          895 c         1094 g          360 t
ORIGIN      
        1 acggctcggc ggacgccggc ggggcggcgc cggagctctt ggccggtgcg ggcggggccg
       61 gcgggtcgtc caccggcgtc ctcggcccgg gcgtgacctc gaccaccacc cggcggcggg
      121 gatcgagctg cccggcgacg aaccggcgca cccggtcggg ggtcacggcc gccgtccgcc
      181 gcaggtcgtc gttgatgtgg tcggggtcgc cgagatagtg gttgtagtag ttcagctggt
      241 cggcgaagcc gccgaagttg ccgatgtcgt cgaggtcggc gacggagtgg gcgacgagcg
      301 ccgtctcggc cgcctcgacc tcggaccggg tcgggccgcg gcgggcgagg tcggcgagct
      361 cggcgtcgat cgccgtctcg agctcgccca ggttgtggcc gggcttggcc gtggcggtga
      421 cggtgaacac cgagccgtcg gccagcgact cgacgtcggc ttccaccgac tgggcgatcc
      481 ggaggtcgtg gaccagccgc cgggtgaggc ggctggcccg ggtgccgtcg agcaggcgcc
      541 gggtgacaat ggcgtcgtag tcgccgggct ggaagatcgg cggcgagagc caggccatcg
      601 tgacccgggg cagctcgacg gcgtcggtca ccgccacccg ctgctcgccg gtaagcggcg
      661 gggccggcac gatccgccgg gtgacgtcgg ggccccgggg gatggtgccg aagtacttct
      721 ccaccatggc cttcgtgcgg gcgacgtcga tgtcgccgac gatggccagg ctggcgttgt
      781 tggggacgta gtagtggcgg aagaagtccc gcacgtcgtc gaggcgggcc gactggatgt
      841 cggcgtggga gccgatgacg tcggggtggt agggatgccc cggagggaag aggcggtggt
      901 acacctcctc gtcggccagc ccgtaggggg cgtcgtcgta gcgctcccgg cgctcgttgc
      961 ggacgaccgc ctgctggttc gacaggctgg cctggtccag ccggtcgagc aggaacccca
     1021 tccggtcgct ctggatccac agggcgaggt cgagctggtt ggccgggacg tcggggatga
     1081 tgtagttcgt gtagtcgaag tgggtgctgg cgttctccga cgtgccggcg gcctcgagga
     1141 ggcggtcggc ctcgccctcg gcgacgtgcc ccgatccctc gaacatcatg tgctcgaaca
     1201 ggtgggcgaa gcccgtccgg ccgggcacct cgttggccgg gccgacgtgg taccagaggt
     1261 tgacggccac caccggcagg cgggtctccc ggcggaggat gacctcgagt ccgttgccga
     1321 gccggtagtg ctcggttccg agatcgaggc gggggacggg caccgccgcc gccggcgccg
     1381 tctgggcgcc gagcacggcg acgccggccg ccatcagccc caacaggacc agtcccacca
     1441 gcaacgtcct gccccggccg ctcatcggtc cggaaatcta agcggtgacg caggaccagc
     1501 gtggcgcggc ggacggatca gccggtctgg taggggctcg gcggcggggc cggctgctgg
     1561 tagccggcgg gcgccggggc gccgggcgcc gggtagacgt cgctgcgcac caccagcgtt
     1621 ccggcgatct tgtcgtggaa cgtctggtgt tgcgggtccc agatcgccca cagcaggccg
     1681 agatagaacg ggaggtagtc gacgatccgc accacggtgc gccagatggc gaggccgtag
     1741 cccagcggcg cgccgttgct ctgccgcacg acgcggatgc ccacggcctt cttcccgagc
     1801 gtctggccgg ccggtcgccc ctcgaagaac gggtagtaga cgaaggccgc caggccgcag
     1861 agcaggaaga ccaggatggc gacgccgttg gggctcggat ccgggttgtc gaagttggag
     1921 gccggcgtcg aggcggccat gacgatcagg ccgaagatga acaccgcgcc gacgatcacc
     1981 acgtcgatga ggtaaccgcc gaggcgctgc ccgaggctgg cgagcccata ggagaccggc
     2041 ccgctgccca cgcccatccc cggtgccgcg ccgtaatagg cgggcggcgg ggacgggtag
     2101 ccgccgggcg gcgcgtagcc cggtggcggg gcggggggcg gtggaggagc gccgtaaccg
     2161 ccggacggcg gcggagcgcc ggcgccgtag ctcggagggg gcgggggcgg gggcggcatc
     2221 gtcggcggcg tcggcggcag cccgccggga ttcgccggcg ggactgtcgg gttcggcggg
     2281 ccttcggcgc cgggcgccgc ccgtccgcag cggggacaga accggctacc ggccgggatg
     2341 tcggcaccgc actggtcgca caacatgggc gctccttccg ggggctgagc gctcggcttg
     2401 acccgttggc cgcacagcgt attgccttcc ggccggcccg gcccgcgatc gcccgggccg
     2461 cccgaccggg cgggtgtgcg agccccgccc cgacgggtac accgagggta tgaacaagct
     2521 cgacgaagat ctcgtccggg acacggtctg cggcctcgag ctgcagctca tcgacgccgt
     2581 cgagcgccag gaacgggcgg agatccagga cgattcgcag gaggcggacc gcctccagga
     2641 agagatcgac ggactgcagt cgcggctggc ggccgtcgcc gaggtggtcg ccaccctcga
     2701 ctgaccgacg acgacggag
//
LOCUS       DATGJT010000603         2668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_600285, whole genome shotgun sequence.
ACCESSION   DATGJT010000603 DATGJT010000000
VERSION     DATGJT010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600285"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VKX24_10405"
     CDS             complement(<1..187)
                     /locus_tag="VKX24_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08940.1"
                     /translation="MTDATGGRAGPVRIAWGLPDAVLCWLAGYLGAVLASFPLYAGHA
                     GGGDLDSRLVFGIVLPAQ"
     gene            complement(184..498)
                     /locus_tag="VKX24_10410"
     CDS             complement(184..498)
                     /locus_tag="VKX24_10410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08941.1"
                     /translation="MSLDRSMIADVRSLSDPELRRLVILAQDLLERRGAGRVPDGAKV
                     TYRREEVRCGKANCTRCPHGPYWYAYWRENGRLRSRYLGSAKPGRSAGEDAPAADAGG
                     GH"
     gene            complement(615..1367)
                     /locus_tag="VKX24_10415"
     CDS             complement(615..1367)
                     /locus_tag="VKX24_10415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08942.1"
                     /translation="MRIMRQRLAAMALIGGLTTLGIGLSAGPASANVSDCTTSNYLGT
                     AQSGSLHITSTPAAGSSVTPGSSITVNASWNDADFNETHALFVCGSVNGTFTPAMSSE
                     DQSVDNNGVLSAVAAVPAGAPAGSNICVVAALVGQIPTKIQGQMVSEKLCYTAAEATT
                     TTTTMAPTTTTTAAPAVTPSDVPTSEAGTPSAPAVEPAPAVAPEVVQAPAPAAQLPRT
                     GSRSEEIAGFGAALLALGGLARFFGRKRPSEA"
     gene            1716..2522
                     /locus_tag="VKX24_10420"
     CDS             1716..2522
                     /locus_tag="VKX24_10420"
                     /inference="COORDINATES: protein motif:HMM:NF012948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08943.1"
                     /translation="MVGLSALAAVGLLATGGVALAATVQTPGPVPGSPEQMSYFADTC
                     RQELQRPPIGGVENVTSPGPGSAVAGDVIDVHLTWDPADWNDTWVEKVLDCVSVDGKP
                     APELTAEERPSPNDGAYDRELDVPVGMAPGHLLCEQGFVFGVLSRGGYSQTSSPRVCF
                     TTEAAPPPPTTTTTAPPTTTTTAPPTTTTTVPVVRAAAGVQKPPPPKPAPVRVLPRTG
                     PHDRLLLLAAGAALAAGGFGVAAGARRRGLLRAATVVPAPWDDGPASWLI"
BASE COUNT          349 a          927 c         1040 g          352 t
ORIGIN      
        1 gctgggcggg caggacgatg ccgaagacca ggcggctgtc gaggtccccg ccgccggcgt
       61 ggccggcata gagcggaaag ctggccagga cggcgccgag gtagccggcc agccagcaga
      121 gcacggcgtc gggcaggccc caggcgatcc ggaccggccc ggcccggccc ccggtggcgt
      181 ccgtcaatgc ccgccgccgg cgtcggccgc cggtgcgtct tcgcccgccg agcggcccgg
      241 cttcgccgag ccgagatacc gggagcggag gcgcccgttc tcccgccagt aggcgtacca
      301 gtaggggccg tgggggcagc gggtgcagtt cgccttgccg cagcggacct cctcgcgccg
      361 gtaggtgacc ttggcgccgt cgggcacccg cccggcgccc cgccgctcga ggaggtcctg
      421 ggccaggatc acgagccggc ggagctccgg gtccgacagc gaccgcacgt cggcgatcat
      481 cgaccggtcg aggctcacgt ccttgagcgt atcggcgggc gggggaaaag aatggcccgg
      541 ccccgaacga gcggggccgg gccaccggcc gccggtgatc ccggcaggcc gaagtgctga
      601 agaaggctga agctctacgc ctcggacggg cgcttccggc cgaagaaccg ggccaggccg
      661 ccgagggcca ggagggcggc gccgaagccg gcgatctcct cgctgcggct tcccgtccgg
      721 ggcagctggg ccgccggggc cggcgcctgg acgacctcgg gggcgacggc cggagccggc
      781 tcgacggccg gggccgacgg cgtgccggcc tcggacgtgg ggacgtcgga gggcgtgacc
      841 gccggggcgg ccgtggtggt cgtggtgggg gccatcgtcg tggtcgtggt cgtggcctcg
      901 gccgcggtgt agcagagctt ctcgctcacc atctggccct ggatcttcgt cggaatctgg
      961 ccgacgagag ccgccacaac gcagatgttc gagccggccg gagcgccggc cgggaccgcc
     1021 gccaccgccg agaggacgcc gttgttgtcg acgctctggt cttcggacga catcgccggg
     1081 gtgaacgtcc cgttcacgga accgcacacg aagagcgcgt gggtctcgtt gaagtcggcg
     1141 tcgttccacg aggcgttgac cgtgatgctg gagcccgggg tgacggatga tccggcggcg
     1201 ggggtgctcg tgatgtgcag ggacccgctc tgggcggtcc cgaggtagtt cgacgtcgtg
     1261 caatcgctga cgttggcgct ggccgggccg gccgaaaggc cgattcccag ggtcgtgagc
     1321 ccgccgatca gggccatggc cgcgagccgc tggcgcatga tgcgcattcc tatgctcctt
     1381 cgaggttcga ctctccggcc gggcctgccg ggtccccggc acatgctcgt gcccggcgga
     1441 cggcgaccgg agaggttggg gggagtaccg ctgaagccga ctgcgccaga gggtttcggg
     1501 gccgaaggcg gggatccctc ggcccgctcc ggcgttggga agaggattgg gtgcagtgtc
     1561 cggagttgcc cgcccgggga cgggaaaccc gggaaatgac ctgagagcgc acgaagggga
     1621 tcggcttgtc ccctggtaag gaagcggttt caatggtcgg cggactgggg attttccgga
     1681 gccgggggtg cgggatgcga ggggctttgg gcagggtggt cgggctgtcg gccctggcgg
     1741 ccgtcgggct gttggccacc ggcggtgtgg cgctggcggc cacggtgcag acgcccggcc
     1801 ccgtcccggg gagccccgag cagatgtcgt acttcgccga tacctgtcgg caggagctgc
     1861 agcggccgcc gatcggcggc gtcgagaacg tcacctcgcc cggacccgga tcggcggtgg
     1921 ccggcgacgt gatcgacgtg cacctcacgt gggaccccgc cgactggaac gacacctggg
     1981 tggagaaggt cctcgactgc gtgtcggtcg acggcaagcc cgctcccgag ctcaccgccg
     2041 aggagcggcc gtctcccaac gacggggcct acgaccgcga gctcgacgtc cccgtcggca
     2101 tggcgccggg ccacctcctc tgcgagcagg gcttcgtctt cggtgtgctg agccggggcg
     2161 gctactcgca gacgtcgagc ccccgggtct gcttcaccac cgaagcggcg ccgccgccgc
     2221 ccaccacgac gaccacggcg ccgcccacca ccacgacgac cgcaccgccg acgacgacca
     2281 ccacggtccc cgtcgtccgg gccgcggcgg gcgtccagaa gccgccgccg cccaagccgg
     2341 cgccggtccg ggtcctgccc cggacgggtc cccacgaccg cctgctcctg ctggcggccg
     2401 gggcggccct ggccgcgggc ggtttcggcg tcgccgccgg cgcccgccgg cgggggctcc
     2461 tgcgggccgc gaccgtcgtc ccggcgccgt gggacgacgg accggcgtcc tggctgatct
     2521 agccccggcc tcccccgcac cgcatcctcc ggcgaacgtt agtaatcgct gacgattggg
     2581 aagggctacc aactgcgggc cacaacggtc cggggggagg agccgagaat gcggggtcgg
     2641 atcatttccg gcgcgctggg atgcgcgg
//
LOCUS       DATGJT010000604         2588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_83047, whole genome shotgun sequence.
ACCESSION   DATGJT010000604 DATGJT010000000
VERSION     DATGJT010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83047"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1249)
                     /locus_tag="VKX24_10425"
     CDS             complement(182..1249)
                     /locus_tag="VKX24_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006904796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HLJ08944.1"
                     /translation="MFDRIEADDYEQVVFCHHRATGLRAIVAVHSTALGPALGGTRFY
                     PYATEEDALEDVLRLARGMTYKAALAGLDLGGGKAVILGDAGRDKNEALLRAYARYVD
                     ALGGRYITAEDVGTTQADMDLIRRETRWVTGVSQSLGGSGDPSVATAQGLYYGLKAVA
                     STLWGDTNLEGRHVAVSGVGKVGYAFVRQLVEDRCRVTVADVVPAAAERAVHDFEVES
                     VPPEKIHAVECDVYAPCALGGALSFQTIPELRCAAVCGCANNQLAEPGCDEALAEAGI
                     LYAPDYCVNAGGIINISEELRGYSRERAETGLRHIYDATLAVFARARAEGITTAAAAD
                     RVAEARIDAVGRLNLIRPPSR"
     gene            1601..1801
                     /locus_tag="VKX24_10430"
     CDS             1601..1801
                     /locus_tag="VKX24_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014687221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BldC family transcriptional regulator"
                     /protein_id="HLJ08945.1"
                     /translation="MQDRTDPDALLTPSEVAEMFRVNPKTVTRWARAGKISAIRTLGG
                     HRRFRAIEIMRYLEQVESEQGL"
     gene            1807..>2588
                     /locus_tag="VKX24_10435"
     CDS             1807..>2588
                     /locus_tag="VKX24_10435"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLJ08946.1"
                     /translation="MSFEGAALEAVTFDYWNTLCREPPGGYLRGRRLEAMSQVLVDAG
                     VGSAGVVLPVLTAGYDAAWRSWAEAWAANRQFTGVDAAHAIADAAERAFAAVASAGGA
                     GIAGLRPRLLAAFAGEGEGADLVPLDGVAEALAGLSALGVRLGIICDVGFTPSPVLLR
                     HLDRLGLLKYFDHWSFSDEVGVYKPDPRIFRHALAGLGRPDPARCAHVGDRRRTDVAG
                     AQALGMRAVRITAAFDDDPDQGPSGDVVIASYDELLPALGLA"
BASE COUNT          358 a          936 c          908 g          386 t
ORIGIN      
        1 cccatccggt tgagggccca tatcttctgg tccagccggc gggtcaggag gatcgtgcgc
       61 cacatggcga cgacgtcgtc gcccgacagc ccgagcgggg tgtgccggtc ctgcaggtgg
      121 agagccgaca ggtccgtccg ctcggtcggg gcgtatgaca tggatcctcc gttgaaagcc
      181 gtcagcgact cgggggccgg atcaggttga ggcggccgac ggcgtcgatg cgggcctcgg
      241 ccacccggtc ggcggcggcg gcggtggtga tgccctccgc ccgggcccgg gcgaacaccg
      301 ccagtgtggc gtcgtagatg tggcggagcc cggtctcggc ccgttcccgg gagtagcccc
      361 gcagctcctc ggagatgttg atgatcccgc cggcgttgac gcaatagtcg ggggcgtaga
      421 ggatgccggc ctcggccagc gcctcgtcgc agcccggctc ggccagctgg ttgttggcgc
      481 agccgcacac cgcggcacag cgcagctcgg ggatcgtctg gaacgacagc gcacccccga
      541 gggcgcaggg ggcgtagacg tcgcactcca cggcgtggat cttctccggc ggcaccgact
      601 cgacctcgaa gtcgtggacg gcccgctcgg cggcggcggg cacgacgtcg gccacggtga
      661 cccggcaccg atcctccacc agctggcgga cgaaggcgta gccgaccttt ccgacgcccg
      721 acacggcgac gtgacggccc tcgaggttgg tgtcgcccca cagcgtcgag gccacggctt
      781 tcagtccgta gtaaagcccc tgggcggtgg ccacgctcgg gtcgcccgac ccgccgagcg
      841 actgcgacac gccggtcacc cagcgggtct cccggcggat gaggtccatg tcggcctggg
      901 tggtgccgac gtcctcggcg gtgatgtagc ggcccccgag ggcatcgacg tagcgggcat
      961 aggcccgcag cagcgcctcg ttcttgtcgc ggccggcatc gccgaggatg accgccttgc
     1021 cgccgccgag gtcgaggccg gccagggcgg ccttgtaggt catcccccgg gccaggcgca
     1081 ggacgtcctc cagggcgtcc tcttcggtgg cgtaggggta gaaccgggtc ccgccgaggg
     1141 cgggcccgag ggcggtggag tggacggcca cgatggcccg caggcccgtc gcccggtggt
     1201 ggcagaagac cacctgctcg tagtcgtcgg cctcgatccg atcgaacatt gggaacgccc
     1261 ttcgacactc ccggggggac ttcctcctat ccgatcatcg taagcctcaa ggccttcttg
     1321 agcggaccgc tcaattcgcg cccagagtgt gccgatacat gccgtgacgg gccgggcacc
     1381 ccagccccgg tctgtcgcac cagtcggtct gagacagcac aaatcggctg gtcgcagcgg
     1441 tcgaactaca gggtgactag tcaatccggg tggtgtggaa atgacaccct cgggctatcg
     1501 accccgaagg gtgcggtgcg taccctcagg gacgaagcgg acacaggctc cccctcgtgg
     1561 ctcacgccgc gggccagtac ccgtaaagag aggaatggtc atgcaggacc gaaccgaccc
     1621 cgacgccctt ctgacgccgt ccgaggtggc cgagatgttc cgggtcaacc ccaagaccgt
     1681 cactcgctgg gccagggccg gcaagatctc cgccatccgg accctcggcg ggcaccgccg
     1741 cttccgggct atcgagatca tgcgctacct ggagcaggtc gagagcgagc aggggctcta
     1801 agtaccttgt ccttcgaggg agcggccctg gaggccgtca ccttcgacta ctggaacacc
     1861 ctctgtcgtg agccacccgg cggctacctt cggggccgcc gcctggaggc catgagccag
     1921 gtactggtcg acgccggcgt ggggagcgcc ggcgttgtac ttcccgtcct caccgccggc
     1981 tacgacgccg cctggcggag ctgggccgag gcgtgggccg ccaaccggca gttcaccggc
     2041 gtcgacgccg cccacgccat cgccgacgcc gcggaacgcg ccttcgccgc ggtcgcctcc
     2101 gccggaggag ccggcatcgc cgggctgcgg ccccggctcc tcgccgcctt cgccggggag
     2161 ggcgagggtg cggatctcgt gcccctcgac ggcgtggccg aggctctcgc cggcttgtcg
     2221 gccctcgggg tgcggctggg gatcatctgc gacgtcgggt ttactccgtc gcccgtcctg
     2281 ctccggcatc tcgaccgtct cgggctgctc aagtacttcg accactggtc gttctccgac
     2341 gaggtcggcg tctacaagcc cgacccccgg atcttccgcc acgccctggc cggcctcggc
     2401 cgccccgacc cggcccgctg cgcccacgtc ggcgaccgcc gccgcaccga cgtcgccggc
     2461 gcccaggccc tcgggatgcg ggcggtgcgg atcaccgccg ccttcgacga cgacccggac
     2521 cagggcccgt cgggcgacgt cgtcatcgcc tcctacgacg agctcctccc cgccctgggt
     2581 ctcgcctg
//
LOCUS       DATGJT010000605         2570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1121415, whole genome shotgun sequence.
ACCESSION   DATGJT010000605 DATGJT010000000
VERSION     DATGJT010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121415"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1451
                     /locus_tag="VKX24_10440"
     CDS             <1..1451
                     /locus_tag="VKX24_10440"
                     /inference="COORDINATES: protein motif:HMM:TIGR00641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA mutase large subunit family protein"
                     /protein_id="HLJ08947.1"
                     /translation="LAGFATAADTNKRYRLLLDRGATGINGVFDYPSLRAVGSDDARA
                     ASDVGRGGVAVDVADDFDDLFAGIPLDQVSVSLVSSQPVGAAPHLAMFLRAAEGRGFD
                     RACLAGTSQNDFLMETAITIAPEALPPAASFRVECDVAEFCIRELPRWNPISVTGYNY
                     REAGADAPLELALTLAHGRAAARELIGRGLAPEVALPRISFFLDAHSDFFEEIAKFRA
                     ARRMWAAFVRDDLGVSDPKAQRFRFHVQTSGVTMTARLPHLNIARSAIQALSAVLGGT
                     QSLHVDGYDEALSIPTEHAALIALHTQHVILWETGVAGSADPLGGSWLVEHLTDAMEE
                     KAGALVDRIEQLGGLVAATEEAWVHTELSKRAFADQQALEDGRRLVVGINAGLDDGDG
                     ARGLSGDVEVQPFELPAGALEAQRARIDAVRARRSEPAVEAALGELGAACGDPGVNVM
                     PAIIAAVAADATLGEIGTVLRDSLGRWHFPLW"
     gene            1445..1864
                     /locus_tag="VKX24_10445"
     CDS             1445..1864
                     /locus_tag="VKX24_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020198894.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HLJ08948.1"
                     /translation="MVAEVERDHRLVGRKAVVAKLGMDAHWRGVIVVAHALRGAGMEV
                     VYLGHATPDQLVSAVVQEDPALVGLSSLSGNHLEECRAVVEGLRAAGIDGVPVVVGGT
                     IPPSDEPALTEMGISGVFGVGSPLRRIVDRIGVLLEE"
     gene            complement(1937..>2570)
                     /locus_tag="VKX24_10450"
     CDS             complement(1937..>2570)
                     /locus_tag="VKX24_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase M20"
                     /protein_id="HLJ08949.1"
                     /translation="VDIPPDRLRQIDDVAGDLGDLVATYPLAPGVAPLGTGNADRLRA
                     RTWEPALEVISAEGLPALRDGGNVLRPRTTAGLSFRLPPTCDAAAAARAVESALTADP
                     PQRAVVTARATSAEGGWAAPPLAPWLEAAVAGASQAAFGADPRYVGEGGTIPFMGMLG
                     RSLPEAQFVITGVLGPGSNAHGPNEFLHIPTAEKVTGAVAHLLDAHARPA"
BASE COUNT          309 a          937 c          997 g          327 t
ORIGIN      
        1 agctggccgg cttcgccacc gccgccgaca ccaacaagcg ctaccgcctg ctgctcgacc
       61 ggggcgccac cgggatcaac ggggtgttcg actacccgag cctgcgggcg gtggggtcgg
      121 acgacgcccg ggcggcgtcg gacgtcggcc ggggcggcgt ggccgtcgac gtggccgacg
      181 acttcgacga tctcttcgcc gggatcccgc tcgaccaggt cagcgtgtcg ctggtgtcgt
      241 cgcagcccgt cggggcggcg ccgcacctgg cgatgttcct ccgggctgcc gaggggcggg
      301 gcttcgaccg ggcctgcctg gccggcacga gccagaacga cttcctcatg gagacggcca
      361 tcaccatcgc ccccgaggcg ctgccgccgg cggcgtcgtt ccgggtcgag tgcgacgtgg
      421 cggagttctg catccgggag ctgccccgct ggaaccccat ttcggtgacg ggttacaact
      481 accgggaggc cggcgccgac gccccgctgg agctggcgct gaccctggcc cacggccggg
      541 ccgccgcccg ggagctgatc ggccggggcc tggcgccgga ggtggcgctg ccccggatct
      601 cgttcttcct cgacgcccac tccgacttct tcgaggagat cgccaagttc cgggccgccc
      661 ggcggatgtg ggccgccttc gtgcgcgacg acctcggcgt gagcgatccg aaggcccagc
      721 gcttccgctt ccacgtccag acctcgggcg tgaccatgac cgcccggctg ccccacctca
      781 acatcgcccg cagcgccatc caggcgctct ccgccgtgct cggcggcacg cagtcgctcc
      841 acgtcgacgg ctacgacgag gcgctgtcga tccccaccga gcacgccgcc ctcatcgccc
      901 tccacaccca gcacgtcatc ctgtgggaga cgggcgtggc cggcagcgcc gaccccctcg
      961 gcggcagctg gctggtggag cacctgaccg acgccatgga ggagaaggcc ggcgccctcg
     1021 tcgaccgcat cgagcagctc ggcgggctgg tggccgccac cgaagaggcg tgggtccaca
     1081 cggagctgtc gaagcgggcc ttcgccgacc agcaggccct ggaggacggg cgccgcctcg
     1141 tggtcggcat caacgccggg ctcgacgacg gtgacggcgc cagggggctc agcggcgacg
     1201 tcgaggtgca gcccttcgag ctgccggccg gggccctcga ggcgcagcgg gcccgcatcg
     1261 acgccgtccg ggcccggcgg agcgagccgg cggtggaggc ggccctcggc gagctcggcg
     1321 ccgcctgcgg cgaccccggc gtgaacgtga tgccggcgat catcgccgcc gtggccgccg
     1381 acgccaccct gggggagatc ggcaccgtcc tgcgggacag cctcggccgc tggcacttcc
     1441 cgctgtggta gccgaggtcg agcgggacca ccgcctggtc ggccgcaagg ccgtcgtggc
     1501 caagctcggg atggacgccc actggcgggg tgtgatcgtc gtggcccacg ccctgcgcgg
     1561 cgccggcatg gaggtcgtgt acctcggcca cgccaccccg gatcagctgg tgtcggccgt
     1621 cgtccaggag gacccggcgc tggtcggcct gtcctccctg tccggcaacc acctcgagga
     1681 gtgccgggcg gtggtggagg ggctgcgggc agccggcatc gacggcgtcc ccgtcgtggt
     1741 cggcggcacg atccccccgt ccgacgaacc ggcgctgacc gagatgggga tcagcggcgt
     1801 cttcggggtc ggctcgccgc tgcggaggat cgtcgatcgc atcggcgtcc tgctggagga
     1861 gtagtacgtc ggccgccggc cgaaccggcg ttcctgaggg cggcaccgca gccctgagga
     1921 acgccggttg ccggggctac gccggccggg cgtgggcgtc gaggaggtgg gcgacggccc
     1981 cggtgacctt ctcggcggtg gggatgtgga ggaactcgtt ggggccgtgg gcattgctcc
     2041 ccgggccgag gacgccggtg atgacgaact gggcctccgg cagcgagcgc ccgagcatgc
     2101 ccatgaacgg gatcgtgccg ccctcgccga cgtagcgggg atcggcgccg aaggccgcct
     2161 gcgaggcgcc ggcgacggcg gcctccagcc agggggcgag cgggggcgcc gcccagccgc
     2221 cctcggcgct ggtcgcccgg gcggtgacga cggcgcgctg cggcgggtcg gcggtcaggg
     2281 cggattcgac ggcccgggcg gcggccgccg cgtcgcacgt cggcggcagg cggaacgaca
     2341 ggccggcggt ggtcctcggc cgcaggacgt tgccaccgtc gcgcagggcc ggcagcccct
     2401 cggcggagat gacctccagc gccggctccc aggtgcgggc ccggagccgg tcggcgttgc
     2461 cggtgccgag gggcgcgacg ccgggcgcca gcgggtacgt cgccaccagg tccccgaggt
     2521 cgccggccac gtcgtcgatc tggcggagcc ggtcgggcgg gatgtcgacg
//
LOCUS       DATGJT010000606         2722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1432274, whole genome shotgun sequence.
ACCESSION   DATGJT010000606 DATGJT010000000
VERSION     DATGJT010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1432274"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            275..>2722
                     /locus_tag="VKX24_10455"
     CDS             275..>2722
                     /locus_tag="VKX24_10455"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HLJ08950.1"
                     /translation="MEPLSVAVETLLRQPLRRAFDWRITGLEHIPGHGAVLLAANHVS
                     MADPPIVASVADRRQRRVRFMAMAELFRSPVPRALFTGLGHIPVPRQTDAARSSLTAA
                     LTVLGLGGCVGIFPEGRLSRDLEPQPGQTGAARLAGWSRAPVVPIGLWGTQRISAPGR
                     PTRLRGRIPVAVAIGPPLTISPDEDVREATDRIMAAICAEVARARTGYPPPRPGEDDW
                     WVRSPDTAQLRTCRRPAPPGDAAGGGGPADVPPGPAEPAGEPRAESGFERNGVDGTNH
                     DGAPVGGGGAEVLEQQLRSIPFFRNLPAGALEAVAERLQPEHHPRGDVVFRQGDAAET
                     MYLVVSGQVEVLAGAEQAPLAALGPGSFVGELALLLGEPRSATLRVVADSWLWALRRA
                     DLDALLSDHPVIGVELSRELGRRLVATNRQLVTAPTTRFTAVLGPGLAELAGAVVARA
                     ETARVGVLELPGADVVGPLPDGVVRLDAGALDPAALAGMAGQDVEGIAYLLIALPTAE
                     GALARVALGLAEHVASFRPVPGWAAPTGARGVVLRGDGSPGSFERIARWVTGQAVGLA
                     LSSGGSKALSHLGVLRVLREAGIVIDAVAGTSGGAMVAAGLAIGLSDDEMLDAVRQLA
                     ATLHFRRFDFNLLPRSALFKGVKLHRQLDGWLGGKTFADTLIPCWVVATDVAGGAEVV
                     ISEGPLADGVRASLSIPGAMNPWPLGGRRCIDGAVVNPMPASVLRDAGLRLVIGSNVA
                     GQELSSEALTDPHLLQIMGRMLNSMEREMIKAQLPLVDVHVRPKVGPASSFDFSRIDE
                     FIREGERAAREALPEIKA"
BASE COUNT          308 a         1039 c         1007 g          368 t
ORIGIN      
        1 tcccggacga gcacgtggcc ctcggagatc gggatgtccg tggtgtgtcg agccagcttc
       61 cgcagctcgt ccttcgtgca ggcgctgaac agcggaacct gggccaggtg ctcgatgtag
      121 gcgtcgcggc gggccatctc cgaagcgctc ccgtcaggcg gacagatcga ggcgaggcta
      181 gccctgaccc gtcgcccggt gtgtgacggt ggtgacagtc ggaaggtcaa cggccgcggc
      241 gcgcgccggg ccgtccggtc atagttttcc ggccatggag ccgctgagcg tcgccgtcga
      301 gaccttgctg cggcaaccgc tccgccgggc gttcgactgg cgcatcaccg gcctcgagca
      361 catccccggg cacggcgccg tcctcctcgc cgccaaccac gtgtcgatgg ccgaccctcc
      421 gatcgtcgcc tcggtggccg accgccggca gcggcgggtg cggttcatgg ccatggccga
      481 gctcttccgc tcgccggtgc cccgggcgct cttcaccggg ctcgggcata tcccggtgcc
      541 gcgccagacc gacgccgccc ggtcatcgct gaccgccgcc ctcacggttc tcggcctcgg
      601 cgggtgcgtc gggatcttcc ccgaggggcg cctgtcccgc gacctcgagc ctcagccggg
      661 ccagaccggc gccgcccgcc tggcgggctg gagccgggcg ccggtcgtcc cgatcgggct
      721 gtggggcacg cagcggatca gcgcccccgg ccgcccgacc cgcctccggg gccggattcc
      781 cgtggcggtg gcgatcggcc cgccgctgac catcagcccc gacgaggacg tccgggaggc
      841 caccgaccgg atcatggccg ccatctgcgc cgaggtcgcc cgggcccgga ccggctaccc
      901 gcccccgcgg ccgggagagg acgactggtg ggtgcgctcc cccgacaccg cccaactgcg
      961 gacctgccgc cggcccgccc cgccgggcga cgccgccggt ggcggcggac cggccgacgt
     1021 gccgccgggg ccggcggagc ccgccggcga accgcgggcc gaaagcggct tcgagcggaa
     1081 cggcgtcgac ggcacgaacc atgatggggc gccggtcggc ggcggaggtg cggaggtgct
     1141 cgagcaacaa ctgcggtcga tccccttctt ccgcaacctg cccgcggggg cgctcgaggc
     1201 ggtggccgaa cggctgcagc cggagcacca cccccggggc gacgtggtct tccggcaggg
     1261 cgacgcggcg gagacgatgt acctcgtggt ctcggggcag gtcgaggtgc tggccggggc
     1321 ggagcaggcg ccgttggccg cgctcggccc gggcagcttt gtcggcgagc tcgccctcct
     1381 gctcggcgag ccccgctccg ccaccctccg ggtggtggcc gacagctggc tctgggcgtt
     1441 gcgccgggcc gatctcgacg ccctgctgag cgaccacccc gtcatcgggg tcgagctgtc
     1501 ccgcgagctc gggcgccggc tggtggccac caaccgccag ctcgtcaccg cgcccaccac
     1561 ccggttcacg gcggtgctgg gccccggcct ggcggagctg gcgggggccg tggtcgcccg
     1621 ggccgagacc gcccgggtcg gcgtgctgga gctcccgggt gccgacgtcg tcggcccgct
     1681 gcccgacggc gtcgtccgcc tcgacgccgg ggcgctcgac ccggcggccc tggccgggat
     1741 ggcgggccag gacgtcgagg gcatcgccta cctcctcatt gccctgccca cggcggaggg
     1801 cgccctggcc cgcgtcgccc tgggcctcgc cgaacacgtc gcctccttcc ggcccgtccc
     1861 gggctgggcc gccccgaccg gcgcccgcgg cgtcgtcctc cggggcgacg gcagccccgg
     1921 ctccttcgag cggatcgccc gctgggtgac gggccaggcg gtggggctgg ccctgtccag
     1981 cggcggatcg aaggccctgt cgcacctcgg tgttctccgg gtgctgcggg aggcggggat
     2041 cgtgatcgac gccgtcgccg gcaccagcgg cggcgccatg gtggcggccg gtctggccat
     2101 cggcctctcc gacgacgaga tgctcgacgc cgtccggcag ctggccgcca cgctccactt
     2161 ccgccgcttc gacttcaacc tgctcccccg gtcggcgctg ttcaaggggg tgaagctcca
     2221 ccgtcagctc gatggctggc tgggcggcaa gacgttcgcc gacacgctga tcccctgctg
     2281 ggtcgtggcg accgacgtcg ccggcggcgc cgaggtcgtg atcagcgaag gtccgctggc
     2341 cgacggcgtc cgggcgtcgc tcagcatccc gggagccatg aacccctggc cgctcggcgg
     2401 ccggcgctgc atcgacggcg cggtggtgaa ccccatgccg gccagcgttc tgcgcgacgc
     2461 cgggctgcgg ctggtcatcg gctccaacgt cgccggccag gagctgtcga gcgaagcgct
     2521 caccgacccc cacctgctcc agatcatggg ccggatgctc aactcgatgg agcgggagat
     2581 gatcaaggcc cagctgcccc tggtcgacgt ccacgtccgg cccaaggtcg gcccggcgtc
     2641 gagcttcgac ttcagccgca tcgacgagtt catccgcgag ggcgagcggg ccgcccgtga
     2701 ggctctcccg gagatcaagg cg
//
LOCUS       DATGJT010000607         2576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_600550, whole genome shotgun sequence.
ACCESSION   DATGJT010000607 DATGJT010000000
VERSION     DATGJT010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600550"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /locus_tag="VKX24_10460"
     CDS             <1..694
                     /locus_tag="VKX24_10460"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013675454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HLJ08951.1"
                     /translation="DHNYPSLVAAALEVGRFTDASCAGATTAAMAGRQPLPGGLTSGP
                     QLDALGPDVDLVTLGIGGNDIGFGQIAVTCAALSLLPPFGAPCRHHFTRHGDEVGQRI
                     DALAPKLAAVLAAIRARAPAARILVVGYPVILPAAGPGCWPVMPIAIGDVAWLRGVEG
                     RLNARLASEAAAAGATFVDTYGSSVGHDVCRLPGRNWVERFVPTSPADAVHPNALGMA
                     NTARQVVQAFSG"
     gene            complement(691..1758)
                     /locus_tag="VKX24_10465"
     CDS             complement(691..1758)
                     /locus_tag="VKX24_10465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014210275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ08952.1"
                     /translation="MCDGGSASPSGAGAGLVVPADLGAWTGERIPLQPVERVTITTIV
                     DNVCDMLAADAGPARRRPLARWPWREAPTTLDGRVPDGPRAEHGFSALVEVTRAGGSV
                     HRVLFDTGVTPDGMVENMRRMDIAPGDVEAVVCSHGHFDHTTGLDGFARAVGRPNLPV
                     LIHPEFWSKRRIAVPGREPWELPTTSRRALEQAGFDIVEGEKPSFLFEGSVLVTGEVA
                     RTTDFEKGMAPHQAWRNGAWEPDPLILDDQAIVMNVGGRGLVVLTGCGHAGVVNLTRY
                     ARHLTGVEAVHAVMGGFHLTGPGFEPIIPATVEALADLAPDVVVPAHCTGWKAATAFA
                     ARLPDAFVQNTVGTTFDLVAA"
     gene            1805..2266
                     /locus_tag="VKX24_10470"
     CDS             1805..2266
                     /locus_tag="VKX24_10470"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLJ08953.1"
                     /translation="MRLLPVIILVALAGAGCGGGSHDSAQDKGMSSNTPMTSAAAGRT
                     VDVEMHDIAYSPTSIPVHAGETVTFVFHNMGQAQHEAFIGDAAAQADHEKTMASGAAG
                     GMSDMGGNEVKVEPGKTASLSHTFKPGETLLIGCHEPGHYAAGMKVALTET"
     gene            complement(2275..>2576)
                     /locus_tag="VKX24_10475"
     CDS             complement(2275..>2576)
                     /locus_tag="VKX24_10475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HLJ08954.1"
                     /translation="RVGVGLPVAVTDDVAGLRERAAATYAVYGTLPSYKRLLDEAGLE
                     GPAGVVIAGDEGEVADRIRALADVGATEFLASPVGGRAVRKETVRVLGALARETV"
BASE COUNT          354 a          983 c          914 g          325 t
ORIGIN      
        1 cgaccacaac tatccgagct tggtcgccgc cgctctcgag gtcggccgct tcaccgacgc
       61 cagctgcgcc ggcgccacca cggcggccat ggccgggcgg cagccgctgc ccggcgggct
      121 gaccagcggc ccgcaactcg atgccctcgg ccccgacgtc gacctcgtca ccctcggcat
      181 cggcggcaac gacatcggct tcggccagat cgccgtgacc tgcgccgccc tcagcctcct
      241 gccccccttc ggcgcaccgt gccggcacca cttcacccgc cacggcgacg aggtcgggca
      301 gcgcatcgac gccctcgccc cgaagctggc ggcggtgctg gcggccatcc gggcccgggc
      361 gccggcggcc cggatcctgg tcgtcggcta ccccgtcatc ctgcccgccg ccggcccggg
      421 ctgctggccg gtgatgccga tcgccatcgg cgacgtcgcc tggctgcggg gcgtcgaggg
      481 ccggctcaac gcccggctgg ccagcgaggc ggccgccgcc ggggcgacct tcgtcgacac
      541 ctacggttcc agcgtcggcc acgacgtgtg ccggctgccg gggcggaact gggtggagcg
      601 cttcgtgccc acctctcccg ccgacgccgt ccaccccaac gccctcggga tggccaacac
      661 cgcccgccag gtcgtccagg ccttctcggg ctaggcggcg acgaggtcga acgtcgtgcc
      721 cacggtgttc tggacgaagg catcggggag ccgggcggcg aaggcggtgg ccgccttcca
      781 gccggtgcag tgggccggga cgacgacgtc gggcgccagg tcggccagcg cctccaccgt
      841 cgccgggatg atcggctcga acccggggcc ggtcagatgg aagccgccca tcacggcgtg
      901 gacggcttcg acgccggtga ggtgccgggc gtagcgcgtg aggttgacga cgccggcgtg
      961 gccgcacccg gtgaggacga cgagcccccg gccccccacg ttcatgacga tcgcctggtc
     1021 gtcgaggatc agcggatcgg gctcccaggc gccgttgcgc caggcctggt ggggcgccat
     1081 tcccttctcg aagtcggtgg tgcgggccac ctctcccgtc accaggacgc tgccttcgaa
     1141 gaggaacgac ggcttctcgc cctcgacgat gtcgaacccg gcctgctcca gcgcccgccg
     1201 gctggtggtg ggcagctccc acggctcccg gccgggcacg gcgatgcgcc gcttcgacca
     1261 gaactccgga tggatcagca ccgggaggtt cggccggccg accgcccggg cgaacccgtc
     1321 gagcccggtc gtgtggtcga aatggccgtg ggagcaaacg acggcctcca cgtcgccggg
     1381 ggcgatgtcc atgcggcgca tgttctcgac catcccgtcc ggcgtcacgc cggtgtcgaa
     1441 cagcacccgg tggaccgacc cgccggctct cgtcacctcc accagggcgg agaacccgtg
     1501 ctcggcccgg gggccgtcgg gcacccggcc gtcgagcgtc gtcggggcct cccgccatgg
     1561 ccagcgggcc agcggccggc ggcgggccgg gccggcgtcc gcggccagca tgtcgcagac
     1621 gttgtcgacg atcgtggtga tcgtcacccg ctccaccggc tggagcggga tccgctcgcc
     1681 ggtccaggcg ccgaggtccg ccgggacgac gaggcccgca ccggcgccgg acggggacgc
     1741 tgatccgcca tcgcacatga cccgcatcct acggacaacg ccggaaatgg ggtaggaagg
     1801 gggcgtgcgg ttacttcccg tcatcatcct tgttgccctg gccggcgccg gatgcggtgg
     1861 cgggtcgcac gacagcgccc aggacaaggg catgtcgtcc aacacgccga tgaccagcgc
     1921 cgccgccggc cggaccgtcg acgtcgagat gcacgacatc gcctattcgc cgacgtcgat
     1981 ccccgtccac gccggcgaga ccgtcacctt cgtgttccac aacatgggtc aggcccaaca
     2041 cgaggcgttc atcggcgacg ccgccgccca ggccgaccac gagaagacga tggcgagcgg
     2101 cgctgccggc ggcatgagcg acatgggcgg aaacgaggtc aaggtcgagc ccggcaagac
     2161 ggcctcgctc agccacacct tcaagccggg cgaaacgctg ctgatcgggt gtcacgagcc
     2221 ggggcactac gccgccggga tgaaggtggc gctgaccgaa acctgacggc ggcgtcagac
     2281 cgtttcccgg gccagcgccc ccagcacccg caccgtctcc ttccggacgg cccggccgcc
     2341 gaccggggag gccaggaact cggtggcgcc gacgtcggcc agggcccgga tgcggtcggc
     2401 gacctcgcct tcgtcgccgg cgatgaccac gccggccggg ccttcgaggc cggcctcgtc
     2461 gagcagccgc ttgtaggacg ggagcgtccc gtagacggcg tacgtcgccg ccgcccgctc
     2521 ccgcaggccc gcgacgtcgt cggtgacggc caccggcagg cccaccccga cccggg
//
LOCUS       DATGJT010000608         2317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1531094, whole genome shotgun sequence.
ACCESSION   DATGJT010000608 DATGJT010000000
VERSION     DATGJT010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1531094"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..1017)
                     /locus_tag="VKX24_10480"
     CDS             complement(223..1017)
                     /locus_tag="VKX24_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08955.1"
                     /translation="MRKMWTALAGAALVIGVAAPAWSVARHQPSDQATGVHAMADHDS
                     GGGGGHGGGGGHGSSGHSSADHGGGHMADHGGHNADGRSVDRDDSRAHNGDRDFHGRD
                     RHFHGRDGRDFDYYDGDYYDYYGCGYYGCGYPYYGPYYGGYGCNYDYPCGPAYDESSA
                     EGSQCFSRTHSGRAVRNPDCQYDPKCGCWYPSSQPPPGQDRGPGGPSGSAPSSPGSSG
                     GGNGGSANAGGPSGGGGGSGGGGSSGGASSSAGGSGSSSGGGGGGH"
     gene            1177..1788
                     /locus_tag="VKX24_10485"
     CDS             1177..1788
                     /locus_tag="VKX24_10485"
                     /inference="COORDINATES: protein motif:HMM:NF017833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HLJ08956.1"
                     /translation="MTGTAGDDGGQEKISAQLEAWLGSDRKKTLGDLVDTFGPRSFAI
                     LFVVLMALPALPLPTGAVSHVLEIVTMLLALELVIGRTEVWIPHRFEDKELKGLTGPK
                     FSGALVKRIRWFERFSRPRMAALLESRLTGVVLGVAVFGLALTAFLSPPFSGLDTLPS
                     LGVVVLGLGVLLGDIVVAGVGLGLGVAGVVVVVGLGKAITQLL"
     gene            1898..>2317
                     /locus_tag="VKX24_10490"
     CDS             1898..>2317
                     /locus_tag="VKX24_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013425059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLJ08957.1"
                     /translation="MSVRHALLALLSDGPKYGLQLRQEFEAKTGEVWPLNVGQVYTTL
                     QRLERDGLVESDDAETDGPQKGFRITAAGHGELMGWLRTPGGDDAPPRDELVIKVLVA
                     MTVPGVDVAELLQVHRRHLLQTMQRYTRLKESAAEDDL"
BASE COUNT          317 a          839 c          828 g          333 t
ORIGIN      
        1 cgagctggtc gcagatgccg gtgcgcatgg cccagacggt acgccccgcc ggccggtcag
       61 tcttcgccgg accccgggtc ggcctcgatc ggtccgcccg caggtcgggc tacccggggc
      121 ggcggcgcct caacgcggcg aggcggcgac ggttctgcgc cgtcgccgcc tcgcctctcg
      181 cgctgcaatc agaaaccggg tgaatgagtc gaacctggtg aatcagtggc cgccgccgcc
      241 cccgccggag ctggagccgg agccgccggc gctgctgctg gcgccgcccg acgagccgcc
      301 accgccggag cccccgcctc cgccggacgg gccgccggcg ttggcgctgc cgccgttgcc
      361 gccgccgctg ctaccgggac tcgacggcgc gctcccggac gggccgcccg ggccgcggtc
      421 ctgacccggg ggcggctggg acgacgggta ccagcagccg cacttggggt cgtactggca
      481 gtcgggattc cggaccgccc gtccgctgtg ggtgcggctg aagcactggg agccctcggc
      541 gcttgactcg tcgtaggccg ggccgcaggg gtagtcgtag ttgcacccgt agccgccgta
      601 gtaggggccg tagtacgggt acccgcagcc gtagtagccg cagccgtagt agtcgtagta
      661 gtcgccgtcg tagtagtcga agtcacggcc gtcgcggccg tggaagtgcc ggtcgcggcc
      721 gtggaagtcg cggtcgccgt tgtgggctct gctgtcgtcc cggtcgacgc tgcggccgtc
      781 ggcgttgtgg ccgccgtggt cggccatgtg cccgccgccg tggtcggcgg agctgtgacc
      841 ggaggagccg tggccgccac caccgccgtg gcccccgccc ccgccgctgt cgtgatcggc
      901 catggcgtgg acgccggtcg cctggtcgga cggctggtgc ctcgccacgc tccaggccgg
      961 agcggcgacg cctatcacca gcgccgcccc ggccagggca gtccacatct tgcgcatcta
     1021 tgcctccgtc tcgctcggcc ccagcaggac ggcgcccccc ttcagaaagc aggcgcttac
     1081 gcgccactgt tccccggaaa ccggacattc aacccgaaaa ggccacaaac cgcctcggac
     1141 agcgggtgtc gacggcccag cggccatgat gacgggatga cggggacggc cggggacgac
     1201 ggggggcagg aaaagatcag cgcccagctc gaggcgtggc tgggcagcga ccggaagaag
     1261 acgctgggcg acctcgtcga cacgttcgga ccccgcagct tcgccatcct gttcgtggtg
     1321 ctgatggccc tgccggcgct ccccctgccg acgggcgcgg tgagccacgt gctcgagatc
     1381 gtcaccatgc tgctggccct cgaactcgtg atcggccgga ccgaggtgtg gatcccccac
     1441 cgcttcgagg acaaggagct gaaggggctc accggcccga agttcagcgg cgcgctggtc
     1501 aagcggatcc gctggttcga aaggttctcc cggccccgga tggccgccct gctggagagc
     1561 cgcttgaccg gcgtggttct cggggtggcg gtgttcgggc tggcgctgac cgccttcctg
     1621 tccccgccgt tctccgggct cgacacgctg ccgtcgctcg gcgtcgtcgt cctcggcctc
     1681 ggcgtcctgc tgggggacat cgtcgtggcc ggcgtgggcc tcggcctcgg agtggccggc
     1741 gtggtcgtgg tcgtcggcct cggcaaggcc atcacccagc tgctctaaga cgcccgaggc
     1801 ccaatgggtg caaagggaac gaagctcctc ggcggccctt caaggccccg ggtataaccc
     1861 gtagaatact cagtatgata ccgagaaagc accgctcatg agcgtgcggc acgccctcct
     1921 ggccctgctc agcgacggcc cgaagtacgg cctgcagctc cgccaggagt tcgaggccaa
     1981 gaccggcgag gtctggcccc tcaacgtcgg gcaggtctac accaccctgc agcgcctgga
     2041 gcgcgacggc ctcgtggagt cggacgacgc cgagaccgac ggaccccaga agggcttccg
     2101 gatcaccgcc gccggccacg gcgagctgat gggctggctg cggacgccgg ggggcgacga
     2161 cgccccgccc cgcgacgagc tcgtcatcaa ggtgctggtc gccatgaccg tgcccggcgt
     2221 cgacgtcgcc gagctcctcc aggtccaccg ccgccacctc ctgcagacga tgcagcgcta
     2281 cacccgcctg aaggagagcg ccgccgaaga cgacctg
//
LOCUS       DATGJT010000609         2868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_811118, whole genome shotgun sequence.
ACCESSION   DATGJT010000609 DATGJT010000000
VERSION     DATGJT010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_811118"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            793..>2868
                     /locus_tag="VKX24_10495"
     CDS             793..>2868
                     /locus_tag="VKX24_10495"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HLJ08958.1"
                     /translation="MIAGPTLAVAARIGFASGADAWPTKTDELPDIQDFTDIFVASQQ
                     DTIYDLKVEIKPDNRVYFEIPKMDIGQGILTCCAIQMADNLDVPFENMDIELSPAEQK
                     WGAAQITGGSHNTRVLWDPIRMVAARIRGQLVTAASQRLGVPVNALRTEDGYVVARDG
                     RKLSYGSLTAEAAKLEPIKGAAMPKPSSEYKLIGKGRPRHDAHLVATGKKQYAMDLFS
                     SKDFLPTVLALAATHGASVVSIDDSEAKKIPGVIAVTHIPGQPDYLIPEAVAVTAETF
                     GIAKKAKNALKVKWSAGPMDQLSDAQIDDVMNGIIDKVTSPGEGLDATFRWPYVPHAP
                     MEENTSVGRVTGEGYEGWGACQIPTTLQRHIAETLGIKVEQVTYHCIQGGGAFGRHLF
                     HDQDLQVAQIAQRVGKPIKLQWLREEGIKHGRTRPVSIHHVKATVSNGDVVGYEHRMA
                     CPEMDLRHGLGDVATGYVTEYNNEGACQYFFAHTQKMPYKTGPTAITLKQRLLAKPTA
                     AWRVVYSGQVHAVDEIVMDELARMLGKDEMDFRIQMADTERHKAVFEKLAHESNWGTK
                     LPAGVAQGIGMHDEYKSIAAYVMEIDTRGKEPRMNKCTVVVDNGYCINPTGTLSSLFG
                     QAMDGFALAFRAGLHVDNGATRESNFHDYKWSRMFDSAPVMQGFVLPNSNVLPGGVGE
                     LGVPAAASAA"
BASE COUNT          540 a          980 c          900 g          448 t
ORIGIN      
        1 gcacgacgac gaccacggcc gccgccctcg aggagtccgc ggccagctcc cggagccatg
       61 ggaccggtaa gaccgacacg gcgctggtcg ttctggccgg catcgtcacg gtgctgctgc
      121 tgggcctgac gctgaggctc ctcgccggta aatcctgagt ctggcaatcg acaatcgccg
      181 ggcgccgtga gacccctctc ggacccggtg cgccgccggt cgagctgagt cgtcgctgag
      241 acccggatca ggcttctgac cagcggaaag atctggaaat tccgggtcgc gggccggtcc
      301 acggcccgct gggcgacaac ctgccaccat ttaccgcacg cccgaaagat tcctgttgca
      361 tatggatgcc cgattcgaga tacattgttc ccggtctccg acgagggggc cgaagtggcc
      421 ggactcgatc gcgctatgag cccggcaaca aggggggccg ggcgcttggt ggcgtgcatg
      481 ttcgggcgtc acagggtcac ggggaggtga tcggaagatc ctccggttcc caggagcttc
      541 acccgatcgg gtgaggaacg ggtcgcccgg ggttcccgtc gcgatccaac aggctgcacc
      601 acaacacatc ggactaacga gtgctggtta atcggacaac cagccagaac ctcactagtt
      661 gccttgtaac tagttgaccc tacgcctgga gcaactggtt cgtcaaggca gcgccgacga
      721 atcacctgga gggaagcctg tatgtcagct cttgacactc ctatcgagcg tcgaacagtc
      781 ctcaagggct ttttgatcgc ggggccgacc ctggcggtcg ccgcccgcat cgggttcgcg
      841 agcggcgccg acgcctggcc gacgaagacg gatgaacttc ctgatattca ggacttcacc
      901 gacatcttcg tcgcaagcca gcaggacacc atctacgacc tgaaggtcga aattaagccc
      961 gacaaccggg tctacttcga gatcccgaag atggacatcg gccagggcat cctgacctgc
     1021 tgtgccatcc agatggccga caacctcgac gttccgttcg agaacatgga catcgaactg
     1081 tccccggcgg agcagaagtg gggcgccgcc cagatcaccg gtggttcgca caacacccgc
     1141 gtcctgtggg acccgatccg catggtcgcc gcccggatcc gcggccagct cgtcaccgcc
     1201 gcctcccagc ggctcggcgt gccggtcaac gctctccgga cggaggacgg ctacgtggtc
     1261 gcccgcgacg gccgcaagct cagctacggc tcgctcaccg ccgaggccgc caagctcgag
     1321 cccatcaagg gtgcagcgat gccgaagccg tcgagcgagt acaagctcat cggcaagggc
     1381 cgcccccgtc acgacgccca cctggtcgcc accggcaaga agcagtacgc catggacctc
     1441 ttctcgtcca aggacttcct gccgacggtt ctggccctgg ccgccacgca cggtgcgtcc
     1501 gttgtgtcga tcgacgactc cgaggcgaag aagatccccg gcgtcatcgc cgtcacgcac
     1561 atccccggcc agcccgacta cctgatcccc gaggccgtgg ccgtcacggc tgagacgttc
     1621 ggcatcgcca agaaggccaa gaacgcgctc aaggtcaagt ggagcgccgg cccgatggac
     1681 cagctgtcgg acgcccagat cgacgacgtc atgaacggca tcatcgacaa ggtgacctcg
     1741 ccgggcgagg gcctcgacgc caccttccgg tggccgtacg tgccccacgc ccccatggag
     1801 gagaacacct ccgtcggtcg ggtcacgggc gagggctacg agggatgggg cgcctgccag
     1861 atcccgacca ccctccagcg tcacatcgcc gagaccctcg gcatcaaggt ggagcaggtc
     1921 acctaccact gcatccaggg tggtggcgcc ttcggtcgtc acctcttcca cgaccaggac
     1981 ctccaggtcg cgcagatcgc ccagcgggtc ggcaagccga tcaagctgca gtggctgcgg
     2041 gaagagggca tcaagcacgg ccgtacccgt ccggtgtcca tccaccacgt caaggcgacg
     2101 gtcagcaacg gcgacgtcgt cggctacgag caccgcatgg cgtgcccgga gatggacctc
     2161 cgtcacggcc tcggcgacgt cgccaccggc tacgtcaccg agtacaacaa cgaaggtgcc
     2221 tgccagtact tcttcgccca cacgcagaag atgccctaca agacgggtcc gacggccatc
     2281 acgctgaagc agcgcctgct ggccaagccc accgccgcat ggcgggtcgt gtactccggc
     2341 caggttcacg cggtcgacga gatcgtgatg gacgagctgg cccggatgct cggcaaggac
     2401 gagatggact tccggatcca gatggccgac accgagcgtc acaaggccgt cttcgagaag
     2461 ctggcccacg agtcgaactg gggcacgaag ctcccggccg gcgtggccca gggcatcggt
     2521 atgcacgacg agtacaagtc gatcgccgct tacgtcatgg agatcgacac tcggggcaag
     2581 gagccccgga tgaacaagtg caccgtggtc gtcgacaacg ggtactgcat caacccgacc
     2641 ggcacgctca gctcgctgtt cggtcaggcg atggacggat tcgccctggc cttccgggcg
     2701 ggcctgcacg tcgacaacgg tgcaacccgt gaatccaact tccacgacta caagtggtcg
     2761 cggatgttcg actcggcccc ggttatgcag gggttcgtcc tgcccaactc caacgtcctt
     2821 ccgggtggtg tcggcgagct gggtgtcccg gctgccgcct ccgccgct
//
LOCUS       DATGJT010000610         2303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_493268, whole genome shotgun sequence.
ACCESSION   DATGJT010000610 DATGJT010000000
VERSION     DATGJT010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493268"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VKX24_10500"
     CDS             complement(<1..229)
                     /locus_tag="VKX24_10500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08959.1"
                     /translation="MSGQRFSPLWGYGPVVALATAFLAVSALTVPARRLQLTVGTGAR
                     AGNDAAAGAQTAAAGDGGPAAPGGAGSGSAAA"
     gene            complement(226..465)
                     /locus_tag="VKX24_10505"
     CDS             complement(226..465)
                     /locus_tag="VKX24_10505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08960.1"
                     /translation="MSGENFGTLSGAEHTLFGGYGPFVALVAVVLAMALLAPTVAPER
                     VVTTRSTVSGDRRSSGTGGVPQERRSSAAPAEDRR"
     gene            complement(462..1847)
                     /locus_tag="VKX24_10510"
     CDS             complement(462..1847)
                     /locus_tag="VKX24_10510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08961.1"
                     /translation="MTGSADAAANVGRLVARASGLPLASTYGAALGHYQGTTARGEAA
                     TLDLGVLGVMLTTPMGCGRAPLSPDQLPKRTVADSHAGAASASKDVAGSGPVGAGREE
                     ASARPDAKGDAAYTSAALGFGQLLVAGEGRSAATAELVEGKERRASATVRFGNVDLAG
                     GLVSLRGLRWAAEQHTGPGGAVVAAGGTFGIDTIVVGGLPLPTDTPLQLAAAFGAANA
                     VLGPFGLRLEPPELTKTSGDREVRVTPLKLVLGDGTAARPLLGPLMSAAQPGREALLE
                     AMKGLGRGGDCNLGQAGGFAFTFADVVAAAMEGAGGIDLELGGVLATTEGVDYGDPFG
                     LIPPGLPTVAPVVAPAAQPHPPAPTSTSEAAGDAPTAFDAPAAAAAAPSPAAAAPMPA
                     NAGATPPPAGPVALVPATRRCESASRGRVSGCSSGAPVPAAAAALGVAVLLFGGDWWR
                     GRRQSTKGGAT"
     gene            2008..>2303
                     /locus_tag="VKX24_10515"
     CDS             2008..>2303
                     /locus_tag="VKX24_10515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP-2 sterol transfer family protein"
                     /protein_id="HLJ08962.1"
                     /translation="MGRYRFLSDEWFDAVEALRDKAPAAPEDVADLAVNMVVTGGPDG
                     ERALHFAAGRFDRGLVDGAPTTVTVPHRVARSLIVDLDPAAAVTAFMTGEIRVEG"
BASE COUNT          285 a          937 c          831 g          250 t
ORIGIN      
        1 ccgccgccgc cgaacccgat ccggcaccgc ccggcgccgc cgggccgccg tccccggccg
       61 ccgccgtctg cgccccggcg gcggcgtcgt tgccggcgcg ggcccccgtc cccaccgtga
      121 gctgcagccg ccgcgccggc accgtcaggg cgctcacggc cagaaacgcc gtggccagag
      181 cgacgacggg cccgtacccc cacagcgggc tgaacctctg cccgctcatc gccggtcctc
      241 ggctggcgca gccgaactcc ggcgttcctg cggaacaccc cctgttcccg aggaacgccg
      301 gtcgcccgac acggtggagc gtgtcgtcac gacgcgttcc ggcgccaccg tcggcgccag
      361 cagggccatc gccaggacca ccgccacgag cgccacgaac ggcccgtagc cgccgaacag
      421 cgtgtgctcg gcaccggaga gcgttccgaa attctcaccg ctcatgtcgc gccccctttc
      481 gtcgattggc ggcggccccg ccaccagtcg cccccgaaga gcagcaccgc cacgcccagc
      541 gccgccgccg ccgccgggac cggggcgccg ctcgaacagc cggacacccg tccccggctg
      601 gcgctctcgc agcgccgggt ggccggcacg agggcgaccg gcccggccgg cggcggcgtg
      661 gccccggcgt tggccggcat cggcgcggcg gccgccggag agggggcggc ggccgccgcg
      721 gccggtgcgt cgaacgccgt cggggcgtcg ccggcggcct cggacgtcga cgtcggcgcc
      781 ggcgggtgtg gttgcgccgc cggcgccacc accggagcga ccgtgggcag ccccggcggg
      841 atcaggccga agggatcgcc gtagtcgacg ccctcggtcg tggccagcac tccgcccagc
      901 tcgaggtcga tgccgccggc gccctccatg gccgccgcca ctacgtcggc gaacgtgaag
      961 gcgaacccgc cggcctggcc gaggttgcag tcgccgccgc ggccgaggcc cttcatggcc
     1021 tccagcagcg cttcacggcc cggctgggcg gcgctcatca gcgggcccag cagcggccgg
     1081 gcggcggtgc cgtcgcccag caccagcttg agcggcgtca cccggacctc gcggtcgccg
     1141 ctggtcttcg tcagctccgg cggctcgagc cgcagcccga acggcccgag cacggcgttg
     1201 gcggcgccga aggccgccgc cagctgcaac ggggtgtcgg tcggcagcgg aagaccgccg
     1261 acgacgatcg tgtcgatacc gaaggtgccg ccggcggcca cgacggcccc gccgggcccg
     1321 gtgtgctgct cggccgccca gcgcagcccc cgcagcgaca ccagcccgcc ggccaggtcg
     1381 acgttgccga agcgcaccgt ggccgacgcc cggcgctcct tcccctcgac gagctcggcg
     1441 gtggcggcgc tgcggccctc gccggccacg agcagctggc cgaacccgag cgccgccgac
     1501 gtgtaggcgg cgtcgccctt ggcatcgggc cgggccgagg cctcctcccg gccggcgccg
     1561 accggcccgg aaccggcgac gtccttcgag gccgacgccg caccggcgtg ggagtcggcc
     1621 accgtccgct tggggagctg gtcgggcgac agcggcgccc gtccgcagcc catcggcgtc
     1681 gtcagcatca cgccgaggac gccgaggtcg agcgtggccg cctcgccccg ggccgtcgtc
     1741 ccctggtagt ggcccagcgc ggcgccgtac gtcgacgcca gcggcaggcc ggacgcccgg
     1801 gccaccagcc gcccgacgtt ggccgccgcg tcagcgctgc cggtcacgaa cgagccctcc
     1861 gcggccgcgg gagccggcac gggcgcgccc agcagcactg cgcaacccag gcccaccatc
     1921 gccgtcgccg cccgaaccgt ggccccactc ggttgacgca cggtatacat ataccctagg
     1981 tatccgaaat gggcaaggag ttcgtgaatg ggccgatacc ggttcctgtc cgacgagtgg
     2041 ttcgacgccg tggaagcctt gcgggacaag gctccggctg ctcccgagga cgtcgccgac
     2101 ctcgccgtca acatggtcgt gaccggagga cccgacggcg agcgggcgct gcacttcgcc
     2161 gccgggcgct tcgaccgggg gctcgtggac ggcgccccga ccaccgtgac cgtcccccac
     2221 cgggtggccc ggtcgctgat cgtcgacctc gatcccgccg cggccgtcac cgccttcatg
     2281 accggcgaga tcagggtcga ggg
//
LOCUS       DATGJT010000611         2383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_704713, whole genome shotgun sequence.
ACCESSION   DATGJT010000611 DATGJT010000000
VERSION     DATGJT010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_704713"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VKX24_10520"
     CDS             <1..712
                     /locus_tag="VKX24_10520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HLJ08963.1"
                     /translation="SAERSRWLQALCRGERRAGLALGGLLPGEPRLRAEPAGDDWVVD
                     GTSPWVSGWGLVDVVLLAARRPDGTLVSLIVDAAEAGGLTVRRQHLVAVDASVTVTAD
                     FHRCTVPGDRLVGVEPYDPRRYNAPDVLRQNGYLALGVAGRCCRLLGPSPFDAELRAC
                     RDGLAGAGEAGIAAARAAASDLALRTAAALVVATGSRAAVRHEHAERLAREALFLLVF
                     GTRPPIRAALLDRFGVPT"
     gene            complement(725..1672)
                     /locus_tag="VKX24_10525"
     CDS             complement(725..1672)
                     /locus_tag="VKX24_10525"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ08964.1"
                     /translation="MSASPAAGPPRLALEVWGHDYGRIAATAEAADALGFAALYYGES
                     PGPLNLETWTVLAGLAERTSALRIGPVIANLLPGYRSFPLFARQVHALAAISGGRLDL
                     RTGTGAASSFARPWWQPAGVEYPDRATRRDVLDEWLAALHHLWSRPEAPFSGRHVRFD
                     AGALGLDPPVPRPPITVAATGPASMRIAARHADVWEASYLTAAEFVALGRRFDEIAAG
                     RARPVLRSLEVDAVTAGTAADRRRLEKRFLAERGPAGRAALAKALKGTGDELAARLAG
                     YRAAGADQLVIAAVDPHDPSTLETLADAAAGWFPLGRKP"
     gene            complement(1669..1959)
                     /locus_tag="VKX24_10530"
     CDS             complement(1669..1959)
                     /locus_tag="VKX24_10530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08965.1"
                     /translation="MADERSPAEWLRDRIAGWSGAVHWTEDAPGDWTAAWAGKEARVR
                     AVPPTSFEAAVWHHPTGPDGPDPELANGPVVFPTPDEALAWSEDEMGAPLPE"
     gene            complement(1989..2300)
                     /locus_tag="VKX24_10535"
     CDS             complement(1989..2300)
                     /locus_tag="VKX24_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012689964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HLJ08966.1"
                     /translation="MMTVITRVSLREGTEPEWDEAMRERLGAARDQPGWVGGQMLIPL
                     EGLNQRIIVGTWMTRADWEAWHDDPAFQETRNRMEELQAQPDEMEWFEVAIEAREASG
                     V"
BASE COUNT          260 a          929 c          902 g          292 t
ORIGIN      
        1 gtcggcggag cggagccggt ggctgcaggc gctgtgccgg ggcgagcgcc gggccggcct
       61 ggccctcggc ggcctcctgc ccggcgagcc ccgcctgcgg gccgaaccgg cgggcgacga
      121 ctgggtcgtg gacgggacct ctccctgggt ctccggctgg gggctcgtcg acgtcgtgct
      181 cctcgccgcc cggaggcccg acggcacgct ggtgtcgctc atcgtcgacg ccgccgaagc
      241 cggcggcctc accgtccgcc gccagcacct cgtcgctgtc gacgccagcg tcaccgtcac
      301 cgccgacttc caccgctgca ccgttccggg cgaccgcctc gtcggggtcg aaccctacga
      361 tccccgccgc tacaacgctc ccgacgtcct ccgccagaac ggctacctgg ccctcggcgt
      421 cgccggccgc tgctgccgcc tgctcggccc gagtcccttc gacgccgagc tccgcgcctg
      481 ccgggacggg ctcgccggcg ccggcgaagc cggcatcgcc gccgcccggg cggcggccag
      541 cgacctcgcc ctgcgcacag ccgcggccct cgtcgtcgcc accggcagcc gggccgcggt
      601 gcgccacgag cacgccgagc ggctcgcccg ggaagctctg ttcctgctgg tcttcggtac
      661 ccgcccgccg atccgcgccg cgctcctcga ccgcttcggc gtgccgacct gagcggggtt
      721 ccgctcaggg cttccggccg agcgggaacc agccggcggc ggcgtcggcc agcgtctcca
      781 gcgtcgaggg gtcgtgggga tcgacggcgg cgatcacgag ctggtcggcg ccggccgccc
      841 ggtagccggc cagccgggcg gcgagctcgt cgcccgtccc cttcagggcc ttggccagcg
      901 ccgcccggcc ggccggtccc cgttcggcga ggaaacgctt ttcgaggcgc cggcggtcgg
      961 cggcggtgcc ggcggtgacg gcgtcgacct ccagcgagcg gaggacgggc cgggcgcggc
     1021 cggcggcgat ctcgtcgaag cggcggccga gcgccacgaa ctccgccgcg gtgaggtacg
     1081 acgcctccca gacgtcggcg tggcgggcgg cgatccgcat cgaggccgga ccggtggcgg
     1141 ccacggtgat cggcggacgg ggcaccgggg ggtcgaggcc gagggccccg gcgtcgaagc
     1201 ggacgtggcg gccggagaag ggcgcctcgg gccgggacca caggtggtgc agcgccgcga
     1261 gccactcgtc gaggacgtcg cggcgggtgg cccggtcggg gtactcgacg ccggccggct
     1321 gccaccacgg ccgggcgaac gacgaggccg cgccggttcc ggtgcggagg tcgaggcggc
     1381 cgccggagat ggccgccagg gcgtggacct ggcgggcgaa gagcgggaac gaccggtacc
     1441 cgggcagcag gttggcgatg accgggccga tccgcagcgc cgacgtccgc tcggccaggc
     1501 cggccagcac cgtccacgtc tcgaggttca gcgggccggg cgattcgccg tagtagaggg
     1561 cggcgaagcc gagggcgtcg gcggcctcgg ccgtggcggc gatgcggccg tagtcgtggc
     1621 cccagacctc gagcgccagg cggggcggac cggcggcggg gctggcgctc actcgggcag
     1681 cggcgctccc atctcgtcct ccgaccaggc cagcgcctcg tcgggcgtgg ggaagaccac
     1741 cgggccgttg gccagttccg gatcgggccc gtccggcccg gtggggtggt gccagacggc
     1801 ggcctcgaac gacgtcggcg gcacggcccg cacccgggcc tccttgccgg cccaggccgc
     1861 cgtccagtcc ccgggggcgt cctccgtcca gtgcacggcg ccggaccagc cggcgatgcg
     1921 gtcccgcagc cactcggcgg gcgagcgttc gtcagccatg accgggaccc taccccggct
     1981 ccaaccggtc agacgccgct ggcctcccgg gcctcgatgg ccacctcgaa ccactccatc
     2041 tcgtcgggct gggcctggag ctcctccatc cggttccggg tctcctggaa cgccgggtcg
     2101 tcgtgccacg cctcccagtc ggcccgcgtc atccaggtcc cgacgatgat ccgctggttc
     2161 aggccctcga gcgggatgag catctggccc ccgacccacc ccggctgatc ccgggcggcg
     2221 ccgagccgtt cccgcatggc ctcgtcccac tcgggctcgg tgccctcccg cagcgacact
     2281 cgggtgatga ccgtcatcat cgggtgactc ctccccactg ggcgacaggt cgccatgggt
     2341 cctaccccgg ttccgccgcc gggacgcttc ccggcgcgac ggc
//
LOCUS       DATGJT010000612         2844 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_187926, whole genome shotgun sequence.
ACCESSION   DATGJT010000612 DATGJT010000000
VERSION     DATGJT010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187926"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VKX24_10540"
     CDS             complement(<1..842)
                     /locus_tag="VKX24_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007289852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HLJ08967.1"
                     /translation="MPRAIWSGSISFGLVNVPVKLYSAVHHQDLSFHQFQEGTNARIR
                     NKRVSEKTGREVDYDDIVKGYEVSKGKYVMVDPDELAQFNPRATRTIDIEDFVALEDI
                     DPIYYDATYYLAPDDGEGARKAYVLLRKAMEDQGRVAIGRLVMRTKQYLAAIRPKDGA
                     LAVSTMLFHDEVVAVSDIDEIPTGRSAPRVSAAEAKMAGRIIESMARDWDPDRYEDTY
                     RVQVLDFLKKKAAGEEIVVEEEPEEQSKVVDLMAALEASLEAAKKGGSSSRKRSTSSS
                     SSKSS"
     gene            1232..>2844
                     /locus_tag="VKX24_10545"
     CDS             1232..>2844
                     /locus_tag="VKX24_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007454484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HLJ08968.1"
                     /translation="MSAVRAPESPSEAAPKNGAPDNGQRPDSAANGAGPPADRLLTEL
                     LDALRQASAGHAEVRLSTRRSGQAKDVAKAFNDFMDLTARYNKEVVRVSRAVGRDGRT
                     TERLDMGPVTGMWVTRVEAVNSLIDDLVRPMNEVARVISAVAEGDLTQKMPLAIDGRP
                     MKGEFARIGTVVNSMVNLLSAFSAEVTRVAGDVGTEGRLGGQARMRGVSGAWRDLTDN
                     VNQMASNLTDQVRNIALVTTAVANGDLSQKITVDARGEVAELKETVNRMVDQLRSFAH
                     EVTRVAREVGTEGRLGGQAEVAGVAGTWKDLTDSVNFMAGNLTSQVRSIAQVTTAVAQ
                     GDLSQKITVDAAGEVAQLKDTINTMVDQLSSFADEVTRVAREVGTEGKLGGQAHVPAV
                     SGTWKDLTDNVNQLAGNLTGQVRNIAQVTTAVAQGDLSQKITVEARGEVAQLKDTVNT
                     MVDQLSSFADEVTRVAREVGTDGRLGGQAYVKGVSGTWKDLTDNVNQLASNLTGQVRN
                     IAQVTTAVARGDLSQKITVEARGEVAELK"
BASE COUNT          473 a         1012 c          973 g          386 t
ORIGIN      
        1 gaggacttcg aggaggacga ggacgtcgac cgcttccggg acgacgagcc gcccttcttc
       61 gccgcctcca ggctggcctc gagggcggcc atcaggtcga cgaccttcga ctgctcctcg
      121 ggctcctcct cgaccacgat ctcctcgccg gcggccttct tcttcaggaa gtcgagcacc
      181 tgcacacggt acgtgtcctc gtagcggtcg gggtcccagt cgcgggccat cgactcgatg
      241 atccggcccg ccatcttcgc ctcggccgcc gacaccctgg gcgccgaccg gccggtgggg
      301 atctcgtcga tgtcggacac cgccacgacc tcgtcgtgga acagcatcgt cgacaccgcc
      361 agcgcgccgt ccttcggacg gatggccgcc aggtactgct tcgtccgcat caccaggcgg
      421 ccgatcgcca cccgcccctg gtcctccatc gccttgcgga gcaggacgta ggccttgcgg
      481 gccccctcgc cgtcatcggg ggccaggtag taggtggcgt cgtagtagat ggggtcgatg
      541 tcctccaggg ccacgaagtc ctcgatgtcg atcgtacggg tggcccgggg attgaactgg
      601 gcgagctcgt cggggtcgac catgacgtac ttgcccttgc tcacctcgta gcccttgacg
      661 atgtcgtcgt agtcgacctc ccggccggtc ttctccgaca cgcgcttgtt gcggatccgg
      721 gcgttggtcc cctcctggaa ctggtggaag gacaggtcct ggtggtggac ggcggagtac
      781 agcttcaccg gcacgttgac gagcccgaag ctgatggaac cggaccagat ggctcggggc
      841 atgggagacc tccatcggcg ccgatcggct gacggatctc tacccacaac ggcgccggac
      901 gaccgccgcc ccggacgccc gagcgcgcca gaacggggtc caaagagacc ccgttcgagc
      961 tggtcgacat cttcggtacc caggcaaagg gctggatgaa gcctggatcg ccattgccga
     1021 cgttacccgt cgccgcccac gaccaaacct gggccgtgaa aatcggtgcg gtcgaggcaa
     1081 aacggcgccc gaccagcggt gagaccttcc gccgggtggg gagcgtctgc tacaacgacg
     1141 ggcgaggggc tggcaccgga taccaggaga gaggtgtcat ggagctggcc cgcgccgcgg
     1201 ccgagtccgg cacgaccatc gcggtggcgc gatgagcgcc gttcgagccc ccgagtcccc
     1261 gtccgaggcc gcgccgaaga acggggctcc ggacaacggg caacgcccgg acagcgccgc
     1321 caacggcgcc ggcccgcccg ccgaccggct cctgaccgag ctgctcgacg ccctgcgcca
     1381 ggcgtcggcc gggcacgccg aggtgcggct gtcgacgcgc cgttccggcc aggccaagga
     1441 cgtggccaag gccttcaacg acttcatgga cctcaccgcc cggtacaaca aggaggtcgt
     1501 ccgggtgtcc cgggccgtcg ggcgggacgg gcgcaccacc gagcggctcg acatggggcc
     1561 ggtgaccggc atgtgggtga cccgggtgga ggccgtcaac agcctgatcg acgacctcgt
     1621 ccgcccgatg aacgaggtcg cccgggtcat ctcggccgtc gccgagggcg acctcaccca
     1681 gaagatgccg ctggccatcg acggccgccc gatgaaggga gagttcgccc gcatcgggac
     1741 ggtggtgaac tccatggtca acctgctgtc ggccttctcg gccgaggtga cccgggtcgc
     1801 cggcgacgtc ggcaccgagg gccgcctcgg cggccaggcc cggatgcggg gcgtgtcggg
     1861 cgcctggcgg gacctgaccg acaacgtgaa ccagatggcg tcgaacctga ccgaccaggt
     1921 ccgcaacatc gccctcgtca ccaccgccgt ggccaacggc gacctgtccc agaagatcac
     1981 ggtcgacgcc cggggcgagg tggccgagct gaaggagacg gtcaaccgga tggtcgacca
     2041 gctccggtcg ttcgcccacg aggtgacgag ggtggcccgg gaggtcggca ccgagggccg
     2101 cctcggcggc caggccgagg tggccggcgt ggccggcacg tggaaggacc tcaccgactc
     2161 ggtgaacttc atggccggca acctgacgag ccaggtccgc agcatcgccc aggtcaccac
     2221 cgccgtggcc cagggcgacc tctcccagaa gatcaccgtc gacgccgccg gcgaggtcgc
     2281 ccagctgaag gacaccatca acacgatggt cgaccagctc tcctccttcg ccgacgaggt
     2341 cacccgggtc gcccgggagg tcggcaccga aggcaagctc ggcggccagg cccacgtccc
     2401 cgcggtcagc ggcacgtgga aggacctcac cgacaacgtc aaccagctgg ccggcaacct
     2461 caccggccag gtccgcaaca tcgcccaggt caccaccgcc gtggcccagg gcgacctgtc
     2521 ccagaagatc accgtcgagg cccggggcga ggtggcccag ctgaaggaca ccgtcaacac
     2581 gatggtcgac cagctctcct ccttcgccga cgaagtcacc cgtgtcgccc gggaggtcgg
     2641 caccgacggc cgcctcggcg gccaggccta cgtgaagggc gtgtcgggca cgtggaagga
     2701 cctgaccgac aacgtcaacc agctggcgtc gaacctcacc ggtcaggtcc gcaacatcgc
     2761 ccaggtgacc accgccgtgg cccggggcga cctgtcgcag aagatcaccg tcgaggcccg
     2821 gggcgaggtc gccgagctga agga
//
LOCUS       DATGJT010000613         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_493476, whole genome shotgun sequence.
ACCESSION   DATGJT010000613 DATGJT010000000
VERSION     DATGJT010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493476"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="VKX24_10550"
     CDS             complement(<1..776)
                     /locus_tag="VKX24_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydrofolate dehydrogenase/cyclohydrolase
                     catalytic domain-containing protein"
                     /protein_id="HLJ08969.1"
                     /translation="MSAIVLDGEAVAARVRAEVADRAAKLAADGVHVGLGTILVGDDV
                     PSARYVAMKHEDCAEVGIASFHQHLPATATQGEVEEAVARFNADPAVHAFLVQVPLPA
                     GLDEERALLAVDPDKDVDGLQPVNLGRLVMGAPGPLPCTPAGIVELLHAYEVPVEGRH
                     VVIVGRGLTIGRPLALLLALKRPGLNAAVTVVHTGVPDLADHVRRADIVVAAAGSAGL
                     VTKDMVKPGAAVVGAGTSWAGRRVLSDVAEDVAEVAGWITP"
     gene            complement(793..>2130)
                     /gene="purH"
                     /locus_tag="VKX24_10555"
     CDS             complement(793..>2130)
                     /gene="purH"
                     /locus_tag="VKX24_10555"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: protein motif:HMM:NF002049.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HLJ08970.1"
                     /translation="LGGRVKTLHPAIHGGILADRSVPGHLEDLERQGIEPIDLVVCNL
                     YPFSSDPSVELIDVGGPTMVRAAAKNFAHVGVVVSPEDYGAVLEELRGDGALSEPTRR
                     RLARKAFAHTAGYDAAIVAWLDAGELLPETLHLTLERAEVVRYGENPHQSGARYRQRG
                     SDSFWDGVVQHGGSALSYLNYFDADAAWRLVHELAADAGRPAVAIVKHANPCGAAVAA
                     DLVEAYRLALDCDPVSAFGGIVAVAGPIDPALAEAIAAGPQADVIVSTALEPEARDRL
                     VKRRKATRLLTAPDPEPGGLQVRSIGRSVLVQEADRLVASPDDWQVVTTARPTDEQWR
                     DLVLAWRVCARTTSNAIVVVRDGQAVGVGAGQPSRVGAAEIALARAGGRAKGGAAASD
                     AFFPFPDGLEVLAEAGVGAVIHPGGSVGDAAVIEAADRLGVALVATGERHFRH"
BASE COUNT          263 a          810 c          807 g          250 t
ORIGIN      
        1 ggcgtgatcc agccggccac ctcggcgacg tcctcggcca catccgagag gacgcggcgt
       61 ccggcccagc tggtgcccgc gccgacgacg gccgccccgg gcttcaccat gtccttcgtc
      121 acgaggccgg ccgagccggc cgcggcgacc acgatgtcgg cccgccgcac gtgatcggcc
      181 aggtcgggga cgccggtgtg gaccacggtg accgcggcgt tgagccccgg ccgcttgagc
      241 gccagcagca gggccagcgg ccgcccgatg gtgagccccc ggccgacgat gaccacgtgg
      301 cgcccctcga ccggcacctc gtaggcgtgc agcagctcga cgatgccggc gggggtgcag
      361 gggaggggcc ccggcgcccc catgaccagg cgcccgaggt tcaccggctg caggccgtcg
      421 acgtccttgt cgggatcgac cgcgagcagc gcccgctcct cgtcgagccc ggccggcagc
      481 ggcacctgga ccaagaaggc gtggacggcg gggtcggcgt tgaagcgggc caccgcctct
      541 tccacctcgc cctgggtcgc cgtcgccggc aggtgctggt ggaaggaggc gatgccgacc
      601 tcggcgcagt cctcgtgctt catcgccacg tagcgcgcgc tcggcacgtc gtcgcccacg
      661 aggatggtgc cgagcccgac atggaccccg tcggcggcga gcttcgccgc ccggtccgcc
      721 acctcggccc gcacccgggc cgccaccgcc tcgccgtcga ggacgatcgc gctcatcacc
      781 ctccgcccct cctcagtgcc ggaagtggcg ctcgccggtc gccaccagcg ccacccccag
      841 ccggtcggcc gcctcgatga cggccgcgtc cccgaccgag ccgccggggt ggatgaccgc
      901 ccccacgccc gcctcggcca gcacctcgag gccgtcgggg aacgggaaga aggcgtcgga
      961 ggcggccgcg ccgcccttgg cccgtccccc cgcccgggcg agagcgatct cggccgcgcc
     1021 gacccgggag ggctggcccg cgccgacccc gacggcctgg ccgtcgcgca cgaccacgat
     1081 ggcgttggac gtcgtccggg cgcacacccg ccaggcgagg acgaggtccc gccactgctc
     1141 gtcggtcggc cgcgccgtcg tcaccacctg ccagtcgtcc ggggaggcca ccagccggtc
     1201 ggcctcctgg acgaggaccg agcggccgat gctgcgcacc tgcagtccgc ccggctcggg
     1261 gtcgggggcg gtgaggagcc gggtggcctt gcgccgcttg acgagccggt cgcgggcctc
     1321 gggttcgagc gcggtcgaga cgatgacgtc ggcctgcggc ccggcggcga tcgcctcggc
     1381 cagggcgggg tcgatcgggc cggcgacggc cacgatgccc ccgaaggccg acaccgggtc
     1441 gcagtcgagc gcgaggcggt aggcctcgac gaggtcggcg gcgacggccg cgccgcacgg
     1501 gttggcgtgc ttcacgatgg cgaccgccgg ccggccggcg tcggcggcca gctcgtgcac
     1561 gaggcgccag gccgcgtcgg cgtcgaagta gttgaggtag ctgagggcac tgccgccgtg
     1621 ctggacgacg ccgtcccaga agctgtccga cccgcgctgg cggtagcgcg cgcccgactg
     1681 gtgcgggttc tccccgtagc gcacgacctc ggcccgctcg agggtgaggt gcagggtctc
     1741 gggcaggagc tcgcccgcgt ccagccaggc gacgatggcc gcgtcgtagc cggcggtgtg
     1801 ggcgaaggcc ttgcgggcca ggcggcgccg ggtcggctcc gacagggccc cgtcgccgcg
     1861 cagctcctcc agcaccgccc cgtagtcctc gggggagacg acgacgccca cgtgggcgaa
     1921 gttcttggcc gcggcccgca ccatcgtcgg gccgccgacg tcgatgagct cgaccgaggg
     1981 gtccgaggag aacgggtaga ggttgcacac gacgaggtcg atgggctcga tgccctggcg
     2041 ctccaggtcc tccaggtgcc cgggcaccga gcggtcggcc aggatgccgc cgtggatggc
     2101 cgggtgcagc gtcttcactc ggccaccgag
//
LOCUS       DATGJT010000614         3608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1122880, whole genome shotgun sequence.
ACCESSION   DATGJT010000614 DATGJT010000000
VERSION     DATGJT010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1122880"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1677
                     /gene="glgP"
                     /locus_tag="VKX24_10560"
     CDS             <1..1677
                     /gene="glgP"
                     /locus_tag="VKX24_10560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HLJ08971.1"
                     /translation="AVRAGTVFTTHTPVPAGIDRFPREMMERYFRSFADECGVGFDTL
                     MALGHEPGAGAESPFNMAVMGLRLASMSNGVSKLHARVSQKMFSGLWPGIPEGEAPIQ
                     AVTNGVHARTWVSAEMDELLSRYVLPEWPEADETRWTHIDDANDDEVWRVKEQGRQRL
                     VAYVRERLRHSALARGVSESDVAWTGEVLDPRVLTLGFARRFAAYKRATLLLSQPERL
                     TRLLTSTERPVQMVFAGKAHPADDIGKEMIRQLISFARNPEIRHRMAFVEDYDMVVAR
                     RMYQGCDVWVNTPRRPLEACGTSGMKAAINGSLNCSILDGWWDEMFDGENGWAISSAE
                     TYEDLAKRDEVEAESLFDLLERQIVPLFYERLGGPVPRRWVRRVKASLRSLGPQVSAS
                     RMVRDYVEQMYEPAAVRADTLGAKAGERAKALSGWKQTVTRAWPAVRIISVDTEATLV
                     DLGASKKVEAVVALGSLEERDVEVQLLHGPVGANEELQPAAMVTMDLVGLDEPAPAGS
                     DGGEGKNLYRYAGSFPCERAGRYGFTVRVVPSHPDLRAFAEMGCVTWAAM"
     gene            1930..2766
                     /locus_tag="VKX24_10565"
     CDS             1930..2766
                     /locus_tag="VKX24_10565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08972.1"
                     /translation="MSPEEQQYIRPPSLRVYLERGGDLSGFALLDSLVEAVVVARRLL
                     PAETNRKQAARNRRFVERWFARHGGEQPVPATQELLTFAYWKAECLEDPALAERFEAA
                     LPADTLARALQLVDDLRHVHPLAVQEELRDWTCRACGETFSLAPAAVVTNTGDELGYD
                     EDLSYCLGCMSIATAALEAASGIDRFTEGLDDERHGLRPVGRITDALAGLDDDELVLV
                     DGPDLDDDDDTGELVIDDDVEHVRSEAARLTAQLETAARRMAALEARRAALIRRLEDS
                     GR"
     gene            complement(3142..>3608)
                     /locus_tag="VKX24_10570"
     CDS             complement(3142..>3608)
                     /locus_tag="VKX24_10570"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLJ08973.1"
                     /translation="YFDNWKVAWFFRANGHIPVRRGTGADWKRAMDAAAEALDAGELF
                     GIYPEGTRSKDGRLHRGHTGVAMLADRTGAPVIPIGFIGTDRAQPVGSKMIWPFKTIT
                     IRIGPPVDFSAEAAQPKGQRVLRAMTDKVMTAIQHLSGQEYTGRYAPLSDRV"
BASE COUNT          489 a         1241 c         1343 g          535 t
ORIGIN      
        1 gcggtgcggg cggggaccgt cttcaccacc cacacgccgg tcccggcggg aatcgaccgc
       61 ttcccccggg agatgatgga gcggtacttc cgcagcttcg ccgacgagtg cggggtgggc
      121 ttcgacacgc tgatggccct gggccacgag cccggggccg gcgccgagtc gccgttcaac
      181 atggcggtga tgggcctgcg gctggcgtcg atgtccaacg gcgtgtcgaa gctccacgcc
      241 cgggtgagcc agaagatgtt ctcgggcctg tggcccggca tacccgaggg cgaggcgccg
      301 atccaggccg tgaccaacgg cgtccacgcc cggacgtggg tgtcggcgga gatggacgag
      361 ctgctcagcc gctacgtcct accggagtgg cccgaggccg acgagacgcg gtggacccac
      421 atcgacgacg ccaacgacga cgaggtctgg cgggtcaagg agcagggccg ccagcggctg
      481 gtggcctacg tgcgggagcg gctgcggcac tcggcgctgg cccggggcgt gagcgagtcc
      541 gacgtcgcct ggacgggcga ggtcctcgac ccccgggtgc tgaccctggg cttcgcccgg
      601 cggttcgcgg cctacaagcg ggccacgctg ctgctctccc agccggagcg gctgacccgg
      661 ctgctgacgt cgacggaacg gccggtccag atggtcttcg ccggcaaggc ccacccggcc
      721 gacgacatcg gcaaggagat gatccgccag ctcatatcgt tcgcccgcaa ccccgagatc
      781 cgccaccgga tggccttcgt ggaggactac gacatggtcg tggcccggcg gatgtaccag
      841 ggctgcgacg tgtgggtcaa cacgccccgg cgtccgctgg aggcctgcgg gacgagcggc
      901 atgaaggcgg ccatcaacgg atcgctgaac tgctcgatcc tcgacggctg gtgggacgag
      961 atgttcgacg gcgagaacgg ctgggccatc agctccgccg agacctacga ggacctggcc
     1021 aagcgggacg aggtcgaggc cgagagcctc ttcgacctcc tcgagcgcca gatcgtgccg
     1081 ctgttctacg agcgtctcgg cgggcccgtc ccccggcggt gggtccggag ggtgaaggcc
     1141 tcgctgcggt ccctcggccc ccaggtcagc gcctcccgga tggtgcggga ctacgtggag
     1201 cagatgtacg agccggcggc ggtgcgggcc gacaccctcg gggccaaggc cggggagcgg
     1261 gccaaggccc tgtcgggctg gaagcagacc gtgacccggg cctggccggc ggtgcggatc
     1321 atctcggtcg acaccgaggc gacgctggtc gatctcgggg cgtcgaagaa ggtcgaggcg
     1381 gtggtggcgc tcgggtcgct ggaggagcgc gacgtcgagg tccagctgct gcacggcccc
     1441 gtcggcgcca acgaggagct ccagccggcg gccatggtca cgatggacct ggtcgggctc
     1501 gacgagccgg ccccggcggg gtccgacggg ggcgagggga agaacctcta ccgctacgcc
     1561 ggctccttcc cctgcgaacg ggcggggcgc tacggcttca ccgtgcgggt ggtgccgtcc
     1621 catcccgacc tgcgggcctt cgccgagatg ggctgcgtca cctgggcggc catgtgactg
     1681 tgaccctcgg aggccgcaga ctcacgcagc gtgggaagtg cttgatgcgc tctttactgt
     1741 gcggtggctg aagacgtgga ttttcgcggc atttgggggg ttttgtcgga gatgggagta
     1801 atctgaagaa cgtaggactg gggaagctgg ggacaaccgg aaaccgacgt cgacgccgct
     1861 cgagagccgt tgagtcttag acttgcacgg cttcgaccgt cgggccaccg gtacggaggc
     1921 caagcgcaga tgtcgcctga agagcagcag tacatccgcc caccctcgtt gcgtgtctat
     1981 ctcgagcgcg ggggcgacct cagcgggttc gccctcctcg attcgctggt cgaggcggtg
     2041 gtcgtggcgc ggcggctgct cccggccgag accaaccgca agcaggcggc ccggaaccgc
     2101 cgcttcgtgg agcgctggtt cgcccgccac ggcggggagc agccggtgcc ggccacccag
     2161 gagttgctca ccttcgccta ctggaaggcc gagtgcctgg aggacccggc gctggccgag
     2221 cgcttcgagg ccgcgctccc ggccgacacc ctggcccggg ccctgcagct ggtcgacgac
     2281 ctccgccacg tccacccgct ggccgtgcag gaggagctga gggactggac gtgccgggcc
     2341 tgcggcgaga cattcagcct ggcgccggcg gccgtggtca cgaacaccgg cgacgagctc
     2401 ggctacgacg aggacctgag ctactgcctc gggtgcatgt cgatcgccac cgcggcgctc
     2461 gaggcggcgt cggggatcga ccgcttcacc gagggcctcg acgacgagcg gcacgggctg
     2521 cggcccgtcg ggcggatcac cgacgccctg gccgggctcg acgacgacga gctcgtcctc
     2581 gtggacgggc cggacctcga tgacgacgac gacaccggag agctcgtcat cgacgacgac
     2641 gtcgagcacg tccgctccga ggccgcccgc ctgacggccc agctcgagac cgccgcccgc
     2701 cggatggcgg cgctggaggc ccgccgggcg gccctgatcc ggcggctcga ggactcgggc
     2761 cgctagccgt ctgcgccgcg gcgtcagggc gtcgggggcg gacgggtcgc cgctcctccg
     2821 caccccacag tcgtcgcggc gacccgtacg ccccctcctt cgccgggtcg ctcggtgggc
     2881 ggggccgggg ggtgcgaccg gtggcgctcg ggcggcattt acggccgtga atggctggtg
     2941 gagcgcgacc ggtcgcaccc cacggcgggc gtcgggggcg gaccggtctc cgctcctcca
     3001 caccccacag tcgtcgcggt gaccggtccg ccccctcctt cttcggtcgg tccgccccct
     3061 ccttcttcgg tcggtccgcc cctccttccg tcgggccgcc cccctcctcc gtcctgtgtc
     3121 ctggcccgtc ctcttttgtg tttagacgcg gtcgctcagg ggcgcgtagc ggccggtgta
     3181 ttcctggccg gagaggtgct ggatggcggt catcaccttg tcggtcatgg ctcgcaggac
     3241 ccgctggccc ttcggttggg ccgcctcggc gctgaaatcc accggggggc cgatccggat
     3301 ggtgatcgtc ttgaacggcc agatcatctt cgaccccacc ggctgggccc ggtcggtgcc
     3361 gatgaacccg atcgggatca cgggggcgcc ggtgcggtcg gccagcatgg ccacgccggt
     3421 gtggccccgg tggaggcggc cgtccttcga acgggtgccc tcggggtaga tcccgaacag
     3481 ctcgccggcg tcgagggctt cggcggcggc gtccatggcc cgcttccagt cggcgcccgt
     3541 gccccgccgg acggggatgt ggccgttggc ccggaagaac caggccacct tccagttgtc
     3601 gaagtact
//
LOCUS       DATGJT010000615         3761 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_493802, whole genome shotgun sequence.
ACCESSION   DATGJT010000615 DATGJT010000000
VERSION     DATGJT010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3761
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493802"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VKX24_10575"
     CDS             complement(<1..191)
                     /locus_tag="VKX24_10575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08974.1"
                     /translation="MGRTSTAVWRTRPEIVTALAERLGEPVDRYVNGSHTWFTEAPGG
                     VALEWRLHPVAGYATPKGLS"
     gene            262..495
                     /locus_tag="VKX24_10580"
     CDS             262..495
                     /locus_tag="VKX24_10580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08975.1"
                     /translation="MTLGLAFLVLSGVFSFGWMLGSALGYQNGRRDAEELARLQAMLV
                     DSIELDLRQRTAAAPKRPVETGIATQGSLLETV"
     gene            complement(526..1383)
                     /locus_tag="VKX24_10585"
     CDS             complement(526..1383)
                     /locus_tag="VKX24_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005173563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043248 - proteasome assembly [Evidence
                     IEA];
                     GO_process: GO:0051131 - chaperone-mediated protein
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HLJ08976.1"
                     /translation="MDPVIWSDQRRLERPVMVAAFEGWNDAADAASAAVTWLRRRLRA
                     TPIARLDPEEFYDFQATRPEVSLVEGTTRKISWPANDCFAAHVEEVGRDLVLFSGVEP
                     NLRWRTFCSTVIGVARETGCEMVVTLGALLADVPHTRPTRLTGTAVDPELIERLGLSH
                     SRYEGPTGIVGVLHDACREAGMPSVSLWAPVPHYVASPPNPKATRALLERLAEVLGVP
                     IGLGELTEAAVAWEARVNELVGSDADIAAYVRQLEERDDDQIDEESLPSGDTLAAELE
                     RFLREQRRD"
     gene            1598..2671
                     /locus_tag="VKX24_10590"
     CDS             1598..2671
                     /locus_tag="VKX24_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013421710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HLJ08977.1"
                     /translation="MTMESRIDQSDAEVRAVHGGSDAIDIDAMAFSTAFDAIVDNIET
                     VIKGKTDVVRLAMVAILCEGHILFEDVPGTGKSMLARAIAQSINATSNRVQCTPDMLP
                     GDITGSSILDQKQGTFEFRPGPIFTNVLLSDEINRATPKTQSALLEAMAERRVSVDGV
                     TRDLPRPFLVLATQNPVELAGTFPLPEAQLDRFLFKLSMGYMSRDTEYEVMFDNSVQL
                     SIEDLGAVIDTRVVRGMIDYAAGIEVAPEVGYYIVDLVHASRKDPAVAMGGSPRATIA
                     LLRASRCLAASDGRGHVYPDDVRAVLPAVMAHRIVLNPDAMLRGDTVDAVLERMTAAV
                     KPPLSARRIPGVRGGPGKSAVEA"
     gene            2677..>3761
                     /locus_tag="VKX24_10595"
     CDS             2677..>3761
                     /locus_tag="VKX24_10595"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HLJ08978.1"
                     /translation="MQRSVRARLDRVVDALSPGSVRRGLEALQRRIGITRSGQIALVG
                     FVLLWVMARVVAGTAMYLFAYGLLLLVGLSYLMAPHRLRLTGTRHGLFPRAQEGDRLD
                     VEVRLTAKRRVGAFILEERVPERLGAPVRVPILKLPAGQTVTHRYGLRCGRRGVYRVG
                     PLVALSGDPLGLARRETVVEEPFELLVHPRLEMVSDRPLTRQFEDPPIRPPVSKPWPS
                     GLEFYGMREYVPGDDLRRIVWRASARTGKVMVREAEQGITDHITLIVDTDRGSHSRDG
                     EGLSESFETGIRVAASLGVRHLRDGYELRCETNGGPLVRPLRGAGSQLVLLDALARLE
                     LDRRPLSEVIMRLVTNARRDAHNVLITP"
BASE COUNT          511 a         1344 c         1349 g          557 t
ORIGIN      
        1 gagaggccct tcggggtcgc atagcccgcc accggatgga gccgccattc cagcgccacg
       61 ccgccgggcg cctcggtgaa ccaggtgtgc gacccgttca cgtaccggtc gacgggttcg
      121 ccgagccgct cggccagggc cgtcacgatt tccggccggg tccgccacac ggcggtcgaa
      181 gtccgcccca cgccgctcac gctaacccga cggtgcttga cgtgaggcgt atgttcaccg
      241 cggtcaaata aggaggccta cgtgacgttg gggctggcat tcctggttct ctccggcgtg
      301 ttctccttcg gatggatgct gggctccgcc ctcggctacc agaacggccg gcgggacgcc
      361 gaggaactgg cccgcctcca ggccatgctc gtcgactcca tcgaactcga cctgcggcag
      421 cggacggcgg cggccccgaa acggcccgtg gagacgggga tcgccaccca gggcagcctg
      481 ctggaaaccg tctgagggcg cctcgggggc gcccggtaag gccgcctaat cccggcgctg
      541 ctcccgcagg aaccgctcca gctcggcggc cagcgtgtcg ccgctcggga ggctctcctc
      601 gtcgatctgg tcgtcgtcgc gctcttcgag ctggcggacg taggcggcga tgtcggcgtc
      661 ggatccgacc agctcgttga cccgggcttc ccacgccacc gccgcctcgg tcagctcccc
      721 gaggccgatc ggcacgccga gcacctcggc cagccgctcg agcagcgccc gggtggcctt
      781 ggggttgggc gggctggcca cgtagtgggg gactggggcc cacagcgaca ccgacggcat
      841 gcccgcctcc cggcaggcgt cgtggaggac gccgacgatg cccgtcggcc cctcgtagcg
      901 gctgtgcgac agccccagcc gttcgatcag ctccgggtcg acggccgtgc cggtgagccg
      961 ggtcggccgg gtgtggggga cgtcggccag cagggcgccg agcgtcacca ccatctcgca
     1021 gccggtctcc cgggccacgc cgatcaccgt ggagcagaag gtgcgccacc ggagattggg
     1081 ctccacgccg gagaacagca cgaggtcgcg gccgacctcc tccacgtggg cggcgaagca
     1141 gtcgttggcc ggccaggaga tcttccgggt cgtgccttcg acgaggctga cctcgggccg
     1201 cgtggcctgg aagtcgtaga actcctcggg gtcgaggcgg gcgatgggcg tcgcccggag
     1261 gcgccggcgg agccaggtga cggcggccga ggcggcgtcg gcggcgtcgt tccagccctc
     1321 gaaggccgcc accatgaccg gccgctcgag ccgccgctgg tcgctccaga tcacagggtc
     1381 catcggcgcc taccctaccg gccccggcct caccggcggg ttgtcacgac cctccaggca
     1441 gaaacttcct gacctgcacc tttgggaggg atttggggcg gctcgcggcg ttcggaggga
     1501 actgcgctgt tagattgggg cgcttcggga ggatgacggg ccgcgccggg ggaacgtgcc
     1561 ttccacgttt tggtccgttc gacgaggacg ccgcgtcatg accatggaga gtcggatcga
     1621 ccagagcgac gcagaggtcc gggcggtgca tggcggatcc gacgccatcg acatcgacgc
     1681 catggccttc tcgaccgcct tcgacgccat cgtcgacaac atcgagacgg tgatcaaggg
     1741 caagaccgac gtcgtgcgcc tggccatggt ggccatcctc tgcgagggcc acatcctgtt
     1801 cgaggacgtc cccggcacag gcaagtcgat gctggcccgg gccatcgccc agtccatcaa
     1861 cgccacctcg aaccgggtcc agtgcacgcc cgacatgctc cccggggaca tcaccggatc
     1921 gtcgatcctc gaccagaagc aggggacgtt cgagttccgg ccggggccga tcttcaccaa
     1981 cgtcctcctg tcggacgaga tcaaccgggc cacgcccaag acccagtcgg cgctcctcga
     2041 agccatggcc gagcggcggg tgtcggtcga cggcgtcacc cgcgacctgc cgcggccgtt
     2101 cctcgtgctg gccacgcaga acccggtgga gctggccggc accttcccgc tccccgaggc
     2161 ccagctcgac cgcttcctgt tcaagctgtc gatgggctac atgagccgcg acacggagta
     2221 cgaggtgatg ttcgacaact ccgtgcagct ctccatcgag gacctcgggg ccgtgatcga
     2281 cacccgggtg gtgcggggga tgatcgacta cgccgccggc atcgaggtcg cccccgaggt
     2341 cggctactac atcgtcgacc tcgtccacgc ctcccggaag gatccggccg tggccatggg
     2401 cgggagcccc cgggcgacga tcgccctgct gcgggcgtcg cgctgcctgg ccgcctccga
     2461 cggccgcggg cacgtctacc ccgacgacgt gcgggccgtc cttccggcgg tgatggccca
     2521 ccgcatcgtg ctcaaccccg acgccatgct gcggggcgac accgtcgacg ccgtgctgga
     2581 gcggatgacc gccgccgtga agccgccgct gtcggcccgg cggatccccg gggtccgggg
     2641 tggccccggg aaatcggcag tcgaggcgta actgccgtgc agcgcagtgt gcgggcccgg
     2701 ctcgaccggg tggtcgacgc gctgtcgccg ggatcggtcc gccgggggct ggaagcgctg
     2761 cagcgcagga tcggcatcac ccgttcgggc cagatcgccc tcgtgggctt cgtcctgctg
     2821 tgggtcatgg cccgggtggt ggccggcacc gccatgtacc tcttcgccta cgggctgctg
     2881 ctgctggtcg ggctgtcgta tctgatggct ccccaccggc tgcggctgac cggcacccgc
     2941 cacgggctct tcccccgggc ccaggagggc gaccggctcg acgtcgaggt gcggctcacg
     3001 gcgaagcgcc gtgtcggcgc cttcatcctc gaggaacggg tgccggagcg gctcggtgca
     3061 ccggtgcggg tgccgatcct caagctcccg gccggccaga ccgtgacgca ccgctacggc
     3121 ctgcgctgcg gccgccgggg cgtctaccgc gtcggcccgc tggtggcgct gtccggcgat
     3181 ccgctcgggc tcgcccggcg ggagacggtg gtcgaggagc cgttcgagct gctggtgcat
     3241 ccgaggctgg agatggtctc cgaccggccg ctcacccggc agttcgagga cccgccgatc
     3301 cggccgccgg tgtcgaagcc gtggccgtcg ggcctggagt tctacggcat gcgggagtac
     3361 gtgcccggcg acgacctgcg ccgcatcgtc tggcgggcct cggcccggac gggcaaggtg
     3421 atggtccgcg aggcggagca gggcatcacc gaccacatca cgctgatcgt cgacaccgac
     3481 cgggggtcgc actcccgcga cggcgaaggg ctctcggaga gcttcgagac cggcatccgg
     3541 gtggcggcgt cgctcggggt gcgccatctg cgggacggct acgagctgcg ctgtgagacc
     3601 aacggcggcc cgctggtgcg cccgcttcgg ggcgccggtt cgcagctggt gctgctcgac
     3661 gccctggccc ggctggagct cgaccgccgg ccgctgtccg aagtgatcat gcggctggtg
     3721 accaacgccc ggcgcgacgc ccacaacgtc ctgatcacgc c
//
LOCUS       DATGJT010000616         2126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1123115, whole genome shotgun sequence.
ACCESSION   DATGJT010000616 DATGJT010000000
VERSION     DATGJT010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1123115"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..830
                     /locus_tag="VKX24_10600"
     CDS             <1..830
                     /locus_tag="VKX24_10600"
                     /inference="COORDINATES: protein motif:HMM:NF024791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0070726 - cell wall assembly [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HLJ08979.1"
                     /translation="EALAWVRSRYYQYYEAGKWRSDPTADLGRISRQQDFIRRLMAQA
                     VQKGALNPIRASHLADAAMANLTVDSTFDVKDALHLVEAFRPVGASGIEMVALPTKPD
                     GAHLLVAPAAQPILARLRGETPPPAGGEASGAGTAPKVAPADVKVRVLNGTGTPGMAG
                     DTAAALGQAGFSPSGSGDADKFGYTKTEIRYNPAGQAKAALLARYLGGAGKLVADPTV
                     RGTDVVLVVGSDWKGVTPPAAPGPAPAAAPTTAAATTAAGPATSGPSPAGGPAQPAC"
     gene            857..1699
                     /gene="rfbD"
                     /locus_tag="VKX24_10605"
     CDS             857..1699
                     /gene="rfbD"
                     /locus_tag="VKX24_10605"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015749324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HLJ08980.1"
                     /translation="MRILVTGAGGQVGSEVAGHLAHCEVVALDRAACDLADRDSVEQA
                     VAAAAPAAVVNCAAWTDVDGCEADPTRAVLVNALGVRHLAAACARVGAHLVHVSTDYV
                     FSGDKPGPYDEWDEPAPRSVYGRSKLGGEAEVARHAGSWSIARTSWVFGRRGRNFVDT
                     IVGRARDGAPLRVVDDQRGCPTYAPDLAGALARLAVERRPGIFHVTNEGACTWHDLAV
                     AAVELAGLDPSVVGTTTTDELGRPAPRPGNSVLSGAAWAAAGFRPLRPWREALAEKLS
                     LVEA"
     gene            1700..>2126
                     /locus_tag="VKX24_10610"
     CDS             1700..>2126
                     /locus_tag="VKX24_10610"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLJ08981.1"
                     /translation="MRVGLNAEPLYQRIPTGVGVYALALCRGLVEIGHAEDLVFFHAD
                     HDEDPPEITALPVDRVAFSLSRDRLYEAWMADRRPAPQSIAGHLDLVHSTGPAIPPAG
                     GAALVITVHDLAPIRFADRYPRRARALHKRGAHIAAAEAA"
BASE COUNT          255 a          869 c          754 g          248 t
ORIGIN      
        1 ccgaggcgct ggcctgggtg cggtcccgct actaccagta ctacgaggcg gggaagtggc
       61 ggtcggaccc gacggccgac ctcggccgca tcagccgtca gcaggacttc atccgccggc
      121 tgatggccca ggcggtgcag aaaggggcgc tgaaccccat ccgggccagc cacctggccg
      181 acgccgccat ggccaacctg accgtcgact ccaccttcga cgtgaaggac gccctgcacc
      241 tcgtggaggc cttccggccg gtcggggcgt cgggcatcga gatggtggcg ctgccgacca
      301 agcccgacgg cgcccacctc ctcgtcgctc ccgccgccca gccgatcctc gcccggctgc
      361 ggggcgagac gccgcccccg gccggcggcg aggccagcgg ggccggcacg gcgcccaagg
      421 tcgctcccgc cgacgtcaag gtgcgggtcc tcaacgggac ggggaccccc ggcatggccg
      481 gcgacaccgc cgccgccctc gggcaggccg ggttctcgcc gtcgggctcc ggcgacgccg
      541 acaagttcgg ctacaccaag accgagatcc gctacaaccc ggcgggccag gccaaggcgg
      601 ccctgctcgc ccgctatctg ggcggcgccg gcaagctggt ggccgacccg accgtccggg
      661 ggaccgacgt cgtcctcgtc gtggggagcg actggaaggg cgtgaccccg ccggcggccc
      721 cgggcccggc gccggccgcc gctcccacga ccgccgctgc cacgaccgcc gccggcccgg
      781 ccacctccgg cccgtcaccg gccggcggcc ccgcccaacc cgcctgctga cggcgccgac
      841 gatgggggcg gtgcccatgc gcatcctggt gacgggggcc ggcggacagg tcggctccga
      901 ggtcgccggc catctggccc actgcgaggt cgtggccctc gaccgggccg cctgcgacct
      961 ggccgaccgc gactcggtgg agcaggcggt ggccgccgcc gccccggccg ccgtcgtgaa
     1021 ctgcgccgcc tggaccgacg tcgacggctg cgaggccgac cccacccggg cggtgctggt
     1081 caacgccctc ggcgtgcggc acctggccgc tgcctgcgcc cgggtcggcg cccacctggt
     1141 ccacgtctcg accgactacg tcttctccgg cgacaagccc gggccctacg acgagtggga
     1201 cgagcccgcc ccccgctcgg tctacggccg ttccaagctc ggcggcgaag ccgaggtcgc
     1261 ccgccacgcc ggctcgtgga gcatcgcccg cacgtcgtgg gtcttcggcc gccggggccg
     1321 caacttcgtc gacaccatcg tcggacgggc ccgcgacggt gcgccgctgc gggtcgtgga
     1381 cgaccagcgc ggctgtccga cctacgcccc ggacctggcc ggcgccctgg cccggctggc
     1441 cgtcgaacgc cgcccgggaa tcttccacgt gacgaacgag ggcgcctgca cgtggcacga
     1501 tctggccgtg gccgccgtcg agctcgccgg actcgacccg tcggtggtcg gcacgacgac
     1561 caccgacgag ctgggtcgcc ccgccccccg cccgggcaac agcgtgctgt cgggtgccgc
     1621 ctgggcggcg gcgggcttcc ggccgctgcg accgtggcgg gaggcgctgg ccgagaagct
     1681 gtcgctggtg gaggcctgag tgagggtcgg cctcaacgcc gaaccgctct accagcggat
     1741 ccccaccgga gtgggggtct acgccctggc gctgtgccgg ggcctggtgg agatcggcca
     1801 cgccgaggac ctcgtgttct tccacgccga ccacgacgag gacccgcccg agatcaccgc
     1861 cctccccgtc gaccgggtcg ccttctccct cagccgcgac cgcctctacg aggcgtggat
     1921 ggccgaccgg cggccggcgc cgcagtcgat cgccggccat ctcgacctcg tccactcgac
     1981 cgggcccgcc atcccgccgg ccggcggcgc cgccctcgtc atcacggtcc acgacctggc
     2041 gccgatccgt ttcgccgacc gctacccccg gcgggcccgg gccctccaca agcgcggcgc
     2101 ccacatcgcc gccgccgagg cggccc
//
LOCUS       DATGJT010000617         2706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1328941, whole genome shotgun sequence.
ACCESSION   DATGJT010000617 DATGJT010000000
VERSION     DATGJT010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328941"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1382
                     /locus_tag="VKX24_10615"
     CDS             <1..1382
                     /locus_tag="VKX24_10615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08982.1"
                     /translation="EEARADERASLIAHHHERGGEFLEAARWGARAAGWAGFGHPMEA
                     ARHWRRVRALVGRLEPSAEAAELGLSARVALLGLHWRLGAASEEGGVRFEDEAAAVFR
                     EAAAFARRNGRADVEALVLMHYGNVRQRGDGVEDGHAILRRAVDVADDIGDPGLQAAA
                     RVPLAWCLFVLGRIGEAADMAGDIVSIVGDDRSVGRGLTVTSPYAWSRMQVAHFSAYV
                     DRLDAGLCALEEIVQLAGEEGDLETQAWAHRHCAVFADLAGTDPEIAAGHANQSLQWA
                     EAAGGAWSRVFVREAVAINHVQRRQWREAIDVVNEALAILGERRLALADVPLLLAVRS
                     RAEIGLGDLVTAQSSAEEAVATAVKTGARHYEARARLELARALAATAPDGGAPAAEAE
                     LGAALVIAEAGAIRSLLPEIHLERARLARMAGDPAGHDQALRTAQRLFAEVGAQARAE
                     AVSLPASSL"
     gene            complement(1395..2435)
                     /locus_tag="VKX24_10620"
     CDS             complement(1395..2435)
                     /locus_tag="VKX24_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HLJ08983.1"
                     /translation="MSGDSFPAFRAAAVQAASCFLDREATLSKLESLAAEAARGGARL
                     VVFPESFIPAFPLWNLVLAPVDQHAFFRALYEQAVAIPSVHTERLAACAQREGVYLSV
                     GVTERSQVSMGGLYNTNLLFSPTGGLLHRHRKLVPTWAEKLTWAAGDASQLRPVETEL
                     GRIGTLICGENTNPLARYALLAQGEQVHISTYPPAWPSRRRGDGRNYDLTRSIEIRAA
                     AHAFEGKVFNIVAAGALDAATVEAIARVDPSVEDIFAGAPPSVSMILDPSGEPCSKRL
                     EGEEGIVYGDIDIAESIEAKQIHDVIGQYQRFDLFSLRVDQRPQQPIVLIGEDEGRAP
                     TPPSAAEDARGE"
BASE COUNT          349 a          958 c         1016 g          383 t
ORIGIN      
        1 tcgaggaggc cagggccgac gagcgcgcct cgctcatcgc ccaccaccac gaacggggcg
       61 gagagttcct cgaggcggcc cggtggggcg cccgggcggc cggttgggcg ggcttcggcc
      121 atccgatgga agcggcgcgc cactggcggc gggtccgggc cctcgtcggc cggctcgaac
      181 cgtcggcgga ggcggccgag ctcgggctct cggcccgcgt ggcgctgctc ggcctccact
      241 ggcgattggg tgccgccagt gaggaaggcg gagtccgatt cgaagacgag gcggccgctg
      301 tcttccgcga ggccgcggcc ttcgcccgcc ggaacgggcg ggcggacgtg gaagcgctgg
      361 tgctcatgca ctacggcaac gtgcgtcagc gcggcgacgg cgtcgaggac ggccacgcca
      421 tcctccggcg agcggtcgac gtcgccgacg atatcggcga tcccgggctg caggccgcgg
      481 cccgggtccc gctggcctgg tgcctcttcg tgctcgggcg gatcggagag gcggccgaca
      541 tggccggcga catcgtttcc atcgtcgggg acgaccggtc ggtggggcgg gggctcaccg
      601 tcacgtctcc ctatgcctgg tcccggatgc aggtggcgca cttcagtgcc tacgtcgacc
      661 gcctcgacgc cggcttgtgc gccctcgagg agatcgtcca gctcgccggc gaggagggag
      721 atctggagac gcaggcctgg gcccaccggc actgcgccgt gttcgccgat ctcgccggga
      781 cggatccgga gatcgccgcc ggccatgcaa accagtccct ccagtgggcc gaggctgccg
      841 gtggcgcatg gtcgcgggtc ttcgtacggg aggccgtggc catcaaccat gtccagcgcc
      901 ggcagtggcg ggaggcgatc gacgtggtga acgaggccct cgccatcctg ggcgagcgcc
      961 ggctggcgct ggccgacgtg ccgctcctgc tcgccgttcg ctcacgggcc gaaatcggcc
     1021 tcggggatct cgtcaccgcg cagtcgagcg ccgaagaggc ggtggcgacg gcggtgaaga
     1081 ccggcgcccg ccactacgag gcccgggccc ggctcgagct ggcccgggcg ctcgccgcca
     1141 ccgcccccga cggcggggcg ccggcggccg aggcggagct cggcgcggcg ctggtgatcg
     1201 ccgaggccgg ggcgatccgt tcgctgctcc cggagattca cctggagcgg gcgcggctgg
     1261 cccgcatggc cggcgatccc gccggtcatg atcaggcgtt gcggacggcg cagcggcttt
     1321 tcgccgaggt cggggcgcag gcccgggcgg aggcggtttc ccttccggcc tcctccctct
     1381 gaggggccgg ccggctactc gccccgggcg tcttcggcgg cggagggcgg ggtgggcgcc
     1441 cggccctcgt cctcgccgat caggacgatc ggctgctgcg gccgttgatc gacccggagc
     1501 gagaacaggt cgaagcgctg gtactgcccg atgacgtcgt ggatctgctt ggcctcgatg
     1561 ctctcggcga tgtcgatgtc gccgtagacg atcccttcct cgccttcgag ccgtttggaa
     1621 cagggctctc cggaggggtc gaggatcatc gacaccgacg gcggtgcgcc ggcgaagatg
     1681 tcctccaccg acgggtcgac ccgggcgatg gcttcgacgg tcgcggcgtc gagcgccccc
     1741 gcggcgacga tgttgaacac cttgccctcg aaggcgtgcg ccgccgcccg gatctcgatc
     1801 gaccgggtga gatcgtagtt ccggccgtcg ccgcggcggc gcgacggcca cgccggcggg
     1861 taggtcgaga tgtggacctg ttccccctgg gccagcagcg catagcgggc cagcgggttc
     1921 gtgttctcgc cgcagatcag cgtcccgatc cggccgagct ccgtctcgac cggtcggagc
     1981 tggctggcgt cgcccgccgc ccacgtcagc ttctcggccc aggtcgggac gagcttgcgg
     2041 tgccggtgga ggagcccgcc ggtcgggctg aacagcagat tggtgttgta gagcccgccc
     2101 atgctgacct ggctccgctc ggtgaccccc acggagaggt acacgccttc ccgctgggcg
     2161 caggccgcca gccgctccgt gtggacgctc gggatggcca ccgcctgctc gtagagagcc
     2221 cggaagaagg cgtgctgatc gaccggcgcc agcaccaggt tccagagggg gaaggcagga
     2281 atgaaggact ccgggaacac caccagccgc gccccgcccc gggccgcctc agcggccagc
     2341 gattcgagct tggagagggt cgcttcgcgg tccaggaagc acgacgccgc ctgtaccgcc
     2401 gcggcccgga acgccggaaa ggaatcgccg ctcatggcca ggtgcctcct ctcggcttcc
     2461 atcctggccc atcggccatg accgtggcga ccccccggcc ggttgtgtcg ccgggcacac
     2521 ggtggctacg gcgcccgggg cacagacagg cgccgcctcc tccggaaaca tgatgccgac
     2581 cgtcaacccg accaggggag gacgccatgg ctgtgatcgt ggccagacca gcacccgccg
     2641 tcgagaccgt cgggccggtg cgcccggtcc ggcccgttcg catgggcggc gtcatcgccg
     2701 cctcca
//
LOCUS       DATGJT010000618         2045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_914352, whole genome shotgun sequence.
ACCESSION   DATGJT010000618 DATGJT010000000
VERSION     DATGJT010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914352"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..785
                     /gene="larE"
                     /locus_tag="VKX24_10625"
     CDS             <1..785
                     /gene="larE"
                     /locus_tag="VKX24_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012875648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HLJ08984.1"
                     /translation="VVACSGGVDSCLLAVVAHQVLGPSALVVTAVSPAVPAEEVAQVE
                     ALAARFGFRWRAVRTAELDRPGYVANAGDRCYYCRSELFDVLAPIAAAEGGGAGPAAV
                     AIGTIVDDLADHRPGQRAAAERGVRTPLADAGFTKADVRAAARELGLPVWDKPAAACL
                     ASRVPYGTPVTLGTLDRVGRAEAAVRALGFADLRVRHYGDVARLEVPLGDLARVLERR
                     AEVVAALTGAGYTYATLDLEGLRSGNLNAALTPGTPRTPGGE"
     gene            795..1037
                     /locus_tag="VKX24_10630"
     CDS             795..1037
                     /locus_tag="VKX24_10630"
                     /inference="COORDINATES: protein motif:HMM:NF020940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIL domain-containing protein"
                     /protein_id="HLJ08985.1"
                     /translation="MSRARLHLSFPEPLVERPVIYEAANRFGVMPNIRRANVETHSGW
                     VILELTGEQQSIDEAVQWFSEVGVTVNRMEGDVLES"
     gene            1059..1736
                     /locus_tag="VKX24_10635"
     CDS             1059..1736
                     /locus_tag="VKX24_10635"
                     /inference="COORDINATES: protein motif:HMM:NF022655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2993 domain-containing protein"
                     /protein_id="HLJ08986.1"
                     /translation="MRKWILIVVPTVIVLGLIVGDQAAKGWAESQLAQRAAAYYPPGA
                     GSSASIHSFPFVGRLLVSGSVPEIDVNLDDVRVDPVLIRQLSIQATDVKLSRSDLFHG
                     KVHLDKVGSGKIVATLDGPSLARAAGVDMRFTPGEATIHQKIQGVDVTAKGKVTVKGN
                     VVTVTPTSVQGLDVPPSRFALSYRLPGIELFPCQADVKVVDNGVVLACTLHDIPPALV
                     QAAQSGG"
     gene            1733..>2045
                     /locus_tag="VKX24_10640"
     CDS             1733..>2045
                     /locus_tag="VKX24_10640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08987.1"
                     /translation="MSGGAAGAAAAEARLREASTALVEGVGRALPGWAARSADGLLAA
                     WGGLEPERRRAVVDEARAAGEAAARRVAAELGALLALDPAEQRATPLEVIRTAVAEPT
                     AV"
BASE COUNT          240 a          746 c          788 g          271 t
ORIGIN      
        1 tcgtcgtcgc ctgctcgggc ggtgtcgact cctgcctgct ggccgtcgtc gcccaccagg
       61 tgctcggccc gtcggccctg gtggtgaccg cggtgtcgcc ggccgtgccg gccgaggagg
      121 tggcccaggt cgaggcgctg gcggcccggt tcggcttccg gtggcgggcg gtgcggacgg
      181 cggagctgga ccggcccggc tacgtggcca acgccggcga ccgctgctac tactgccgca
      241 gcgagctgtt cgacgtcctg gccccgatcg ccgccgccga gggcggcggg gccggcccgg
      301 cggccgtcgc catcgggacg atcgtcgacg acctcgccga ccaccggccg gggcagcggg
      361 ccgccgccga gcggggcgtc cggacgccgc tggccgacgc cggcttcacc aaggccgacg
      421 tgcgggccgc cgctcgggag ctcgggctcc cggtgtggga caagcccgcc gccgcctgcc
      481 tcgcctcccg ggtcccctac ggcacgccgg tcaccctcgg gacgctggac cgcgtcggcc
      541 gggccgaggc cgccgtccgg gcgctggggt tcgccgacct ccgggtccgc cactacggcg
      601 acgtggcccg cctcgaggtg ccgctcggcg acctcgcccg ggtgctggag cgccgggcgg
      661 aggtggtggc ggcgctcacc ggggcgggct acacctatgc gacgctcgac ctggaggggc
      721 tacggtcggg caacctcaac gcggccctga cgccggggac accccggacc ccgggggggg
      781 agtgatccag tccgatgagc cgagcccgcc tccacctgtc gttccccgag ccgctggtcg
      841 agcggccggt gatctacgag gccgccaacc gcttcggggt gatgcccaac atccggcggg
      901 ccaacgtcga gacccactcc ggctgggtga tcctggagct caccggcgag cagcagtcga
      961 tcgacgaggc ggtgcagtgg ttctccgagg tcggcgtgac ggtgaaccgc atggaaggcg
     1021 atgtattgga gagctgaccg gtcgggcagg cttgcgccgt gcgcaagtgg atcctcatcg
     1081 tcgtcccgac cgttatcgtc ctcggcctga tcgtcggcga ccaggccgcc aagggctggg
     1141 cggagtcgca gctggcgcag cgggccgccg cctactaccc gccgggagcg gggtcgtcgg
     1201 cctcgatcca ctcgttcccg ttcgtcgggc ggctgctggt gtcgggctcc gtccccgaga
     1261 tcgacgtcaa cctcgacgac gtccgggtcg atccggtgct gatccgccag ctgtcgatcc
     1321 aggccaccga cgtgaagctg agccggagcg acctgttcca cggcaaggtg catctcgaca
     1381 aggtgggctc gggaaagatc gtcgccaccc tcgacgggcc gtcgctggcc cgggcggccg
     1441 gcgtcgacat gcggttcacc ccgggcgagg ccaccatcca ccagaagatc cagggcgtcg
     1501 acgtcaccgc caaggggaag gtcacggtca agggcaacgt cgtcaccgtc acgccgacgt
     1561 cggtgcaggg cctcgacgta ccgcccagcc gcttcgccct cagctaccgg ctcccgggca
     1621 tcgagctctt cccctgccag gccgacgtga aggtcgtgga caacggcgtc gtcctggcct
     1681 gcaccttgca cgacatcccg ccggcgctgg tccaggcggc gcagtccggc gggtgagcgg
     1741 cggggcggcc ggggcggcgg cggccgaggc ccggttgcgg gaggcgtcga cggcgctggt
     1801 cgagggcgtc gggcgggcgc tgcccgggtg ggcggcccgc tccgccgacg ggctcctggc
     1861 cgcctggggc gggctcgaac cggaacggcg ccgggccgtg gtcgacgagg cccgggcggc
     1921 gggggaggcc gccgcccgcc gggtggcggc cgaactgggc gccctgttgg ccctcgatcc
     1981 ggccgagcag cgggccacgc cgctcgaggt gatccgcact gcggtcgccg aaccgacggc
     2041 ggtgc
//
LOCUS       DATGJT010000619         4076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1222221, whole genome shotgun sequence.
ACCESSION   DATGJT010000619 DATGJT010000000
VERSION     DATGJT010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1222221"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..439)
                     /locus_tag="VKX24_10645"
     CDS             complement(<1..439)
                     /locus_tag="VKX24_10645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HLJ08988.1"
                     /translation="MPRRAARTVAVSAVLLAAVGCRGRHGLRSSAGPASAAPGGLPLH
                     RVADVAMPGPAVRFDYQDVDVDHRRLYVAHLGAGRVVAVDVDRLTVAGTVGGTANVHG
                     VRVAPDLDRVFATATGTDEVVAIQASSLTVIGRARTGRFPDGVA"
     gene            complement(456..887)
                     /locus_tag="VKX24_10650"
     CDS             complement(456..887)
                     /locus_tag="VKX24_10650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010844624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HLJ08989.1"
                     /translation="MKWATRRGIHVDRAACAWLIRRSIDPDAEFVFVDDPSEVPAGAT
                     PFDMRGAELGHHAGDCSFETILRRYDLDDETLWDIARIVHEADLADERYDAPEAPGLD
                     VICRGLSMTHDDPELLTITGAIFDGLYEHRRRALLLGREPA"
     gene            complement(884..1357)
                     /locus_tag="VKX24_10655"
     CDS             complement(884..1357)
                     /locus_tag="VKX24_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011754996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Chromate resistance protein ChrB"
                     /protein_id="HLJ08990.1"
                     /translation="MAARLKWVFLLYRLPRNPSTPRIALWRGLRRLGTVQLADGLVAL
                     PLDARTKEQLEWLAEEVVDACGEASIWIAEAGSAAQERALAGRMAEAVAAEYRAVSAA
                     ALAARSSSPAARRRTLRRLRRELRAIRLRDFFPPPEATEARQAVEGLAGAREATA"
     gene            1520..2491
                     /locus_tag="VKX24_10660"
     CDS             1520..2491
                     /locus_tag="VKX24_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HLJ08991.1"
                     /translation="MEMPMPNIRRIHPVILLSAVALLAAGCNSGGSSKHDAAVSTTAA
                     APTVDWNAVDGAVGRKGDVLSGDVHRYGFPRSDLKVTLDGTALKPGFALGSYAAFAAT
                     SKDVVVMGDLVLLETEVSPVMARLQEQGIDISAVHNHLLRDQPKVMYLHYVGHSADAV
                     ALARSLHSALAASATPLAAPGPSAPTTAADLGFDPAAVDKIMGRAGTTGGGLQKYSVA
                     RAETLTMGGSDVHLTPALGVGTVINFQPLGGGKAAVTGDFSLVGSEVAPVAKTLRDNG
                     IEVTAVHSHMTDDEPHLYYMHFFATGDATRLAQGLRAALDQTHSAPA"
     gene            complement(2615..3544)
                     /locus_tag="VKX24_10665"
     CDS             complement(2615..3544)
                     /locus_tag="VKX24_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020725686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HLJ08992.1"
                     /translation="MHLLDQQVAWDPFPPSRRHDDTEDRRAAHRAVAWSAIGLAIAGI
                     VELAVALISGSVGLLGDALHNLSDVSTSALVFIGFRLSKRPASSSRPYGSERAEDLVG
                     LGVALVIWGSAAFAGVASYHKLTAHGHTTHVGLGVLAAVVGIVANQVVARYKAAVGRR
                     IQSATLLGDARHSWLDALSSAGALVGLAAVAAGWRWGDALAGLVVTCFIVHVGWAVTR
                     ELVEHLMDGIDPAVVTAAERAAAMIPAVQHAHVRARWMGRSLLIEVEGFVDATMTVAE
                     SEELGRAVEDAVFAAVPATRAVLWCPRAMPAMG"
     gene            complement(3765..>4076)
                     /locus_tag="VKX24_10670"
     CDS             complement(3765..>4076)
                     /locus_tag="VKX24_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014001328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HLJ08993.1"
                     /translation="PRVVTTEWVLGETWTLLNRRIGHRAAVGGVAAIRTLPGVEVEPV
                     SDTDLAAARRWLESHDEREYSFADAVSFPVMHRRRLTEALAFGGDFAAAGFVEVRPAP
                     A"
BASE COUNT          612 a         1496 c         1470 g          498 t
ORIGIN      
        1 aggccacgcc gtcggggaac cggccggtcc gggcccgccc gatgacggtc agggacgacg
       61 cctggatggc gacgacctcg tcggtcccgg tggcggtggc gaagacccgg tcgaggtcgg
      121 gagcgactct gacgccgtgg acattcgccg tcccgccgac ggtgccggcg acggtcaggc
      181 ggtcgacgtc gacggccacg acccggcccg cgccgagatg ggcgacgtag aggcggcggt
      241 ggtcgacgtc gacgtcctgg tagtcgaaac ggaccgccgg accgggcatc gccacgtcgg
      301 caacccggtg cagcggtagg ccaccgggag cggccgacgc cgggccggcg ctcgagcgga
      361 ggccatggcg gccgcggcag ccgaccgcgg cgaggagcac cgccgagacg gcgacggttc
      421 gggccgctcg ccgcggcatc acctccgccg tgtcctcatg ccggttcccg gccgagcagc
      481 agcgcccggc gccggtgctc gtagaggccg tcgaagatgg cgccggtgat cgtcaagagc
      541 tcgggatcgt catgggtcat ggacaggccg cggcagatga cgtcgaggcc gggggcctcg
      601 ggggcgtcgt agcgctcgtc ggcgaggtcg gcctcatgca cgatgcgggc gatgtcccac
      661 agcgtctcgt cgtcgaggtc gtagcggcgc aggatcgtct cgaagctgca gtcgccggcg
      721 tggtggccga gctccgcccc ccgcatgtcg aacggggtgg ccccggccgg gacctcggac
      781 gggtcgtcga cgaagacgaa ctcggcgtcg ggatcgatcg accggcggat gagccaggcg
      841 caggcggcac ggtcgacgtg gatgccccgc cgggtcgccc acttcatgcc gtggcctccc
      901 tggccccggc cagcccctcc accgcctgcc gggcctcggt cgcttccggg ggcgggaaga
      961 agtcccgcaa ccggatggcc cgcagctccc ggcgcagccg gcgcagcgtc cgccggcgcg
     1021 ccgcggggga cgacgaccgg gccgccaggg cggcggccga gaccgcccgg tactccgccg
     1081 ccaccgcctc ggccatccgc ccggccaggg cccgttcctg ggccgccgag cccgcctcgg
     1141 cgatccagat cgacgcctcg ccgcaagcgt cgacgacctc ctcggccagc cactccagct
     1201 gctctttggt ccgagcgtcg agcggcaggg cgaccagccc gtcggcgagc tggaccgtgc
     1261 cgaggcggcg caagccccgc cagagggcga tccggggggt ggacgggttg cggggcaggc
     1321 ggtacaggag gaacacccac ttcagccggg ccgccacccc cggagcgtat ctgaaaccgg
     1381 ggttgcagac aggcgggcgg gggaagcggg tcctgaacga cggccccccg ggcaggggac
     1441 atggtattta ctcgtgggag ttagagtcgc cccgtttgcc ccttcgaaac cggggttgca
     1501 catgtacgtc cggactgcga tggagatgcc catgccgaac atccgccgca tccacccggt
     1561 gatcctcctc agcgccgtcg ccctcctcgc cgccgggtgc aacagcggcg gctcctcgaa
     1621 gcacgacgcg gcggtgtcga cgaccgccgc cgccccgacc gtcgactgga acgcggtcga
     1681 cggcgccgtg ggccgcaagg gtgacgtgct ctccggcgac gtccaccgct acggcttccc
     1741 ccgttccgat ctgaaggtga ccctcgacgg caccgcgctc aagccggggt tcgccctcgg
     1801 ctcctacgcc gccttcgccg ccaccagcaa ggacgtcgtc gtcatgggcg atctcgtgct
     1861 cctggaaacc gaggtcagcc cggtgatggc caggctccag gagcagggca tcgacatctc
     1921 ggccgtccac aaccacctgc tccgggacca acccaaggtg atgtacctcc actacgtcgg
     1981 ccactcggcc gacgccgtcg ccctggcccg gagcctgcac agcgccctgg ccgcctccgc
     2041 cacccccctg gccgcgcccg ggccgtcggc gcccaccacc gccgccgatc tcggcttcga
     2101 cccggccgcc gtggacaaga tcatggggcg ggccggcacg acgggcggcg ggctccagaa
     2161 gtacagcgtc gcccgggccg agacgctcac catgggcggc agcgacgtcc acctcacccc
     2221 ggccctcggc gtggggacgg tcatcaactt ccaacccctc ggcgggggca aagccgccgt
     2281 caccggggac ttctccctcg tcggcagtga agtggcgccg gtggccaaga ccctgcggga
     2341 caacgggatc gaagtcaccg ccgtccacag ccacatgacc gacgacgagc ctcacctgta
     2401 ctacatgcac ttcttcgcca ccggcgacgc caccaggctg gcccaggggc tgcgggcggc
     2461 gctcgaccag acgcactccg ctccggcgtg accggaggcg accgggaacc gcccggtcgc
     2521 ggcggcccgc ccaggcccgt agccaaggac ttcccgtcgc ctgtgtctct cccccgccgc
     2581 cactccggcg gccacaccgg cggtctcgac cggctcatcc catcgccggc atcgcccgag
     2641 ggcaccacag caccgcccgg gtcgcgggga cggcagcgaa gacggcatct tcgacggcgc
     2701 ggcccagctc ttcactctcc gccacggtca tcgtggcgtc gacgaagcct tcgacctcga
     2761 tgagcaggga ccggcccatc cagcgggccc ggacgtgagc gtgctgcacg gccgggatca
     2821 tcgccgcggc ccgttcggcc gcggtcacga cggccgggtc gatcccgtcc atgaggtgct
     2881 cgacgagttc gcgggtgacc gcccacccga catggacgat gaagcaggtg acaaccagcc
     2941 cggccagggc gtcgccccaa cgccagccgg cggcgacggc ggcgaggccg accagggcac
     3001 cggcggacga caaggcgtcg agccaggagt gccgggcgtc ccccaggagc gtcgccgact
     3061 ggatgcgccg cccgactgcg gccttgtagc gggccacgac ctggttggcg acgataccga
     3121 cgacggcggc gaggacgccg aggccgacat gggtggtatg accgtgagcg gtgagcttgt
     3181 ggtagctggc cacgccggcg aaggcggcgc tgccccagat caccaacgcc acaccgagcc
     3241 cgaccaggtc ctccgcccgt tccgacccgt agggccggga ggacgaggcc ggccgtttcg
     3301 agaggcggaa cccgatgaag accaacgccg acgtggacac gtccgaaagg ttgtgcaggg
     3361 cgtcgccgag caagccgacc gagccgctga tcagggcgac ggccagctcg acgatgccgg
     3421 cgatggcgag tccgatcgcc gaccaggcga cggcccggtg agcggcccgg cggtcttcgg
     3481 tgtcgtcgtg gcggcgggac ggtggaaacg ggtcccatgc cacctgctgg tcgaggagat
     3541 gcacggctcc tcccgtggtc gtttccggtc aggctaaagg ctgagcggtg tgctcggtgc
     3601 ccgaacgagg accgtcaacg cgccgagagg ctgcgacggg accacccagc agcgaacacc
     3661 gagggatcgt tagcgagtga ggcgacgttg aggatcgtcc tgaccggtgc tcctcgacgc
     3721 gccggatggg ccacatcgcc gttgctggac gggagcagcc gggttcaggc cggcgccggc
     3781 cggacttcga cgaacccggc ggcggcgaag tcgccgccga aggccagggc ctcggtgagg
     3841 cgccgtcggt gcatcaccgg gaaggagacg gcgtcggcga aggagtactc ccgttcgtcg
     3901 tgcgactcga gccaccgccg ggcggcggcc aggtcggtat ccgacacggg ttcgacctcg
     3961 acgccgggca gggtccggat ggcggcgacc ccgcccaccg cggcccgatg gccgatccgt
     4021 cggttgagca acgtccacgt ctccccgaga acccattccg tggtcaccac ccgggg
//
LOCUS       DATGJT010000620         2491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1329188, whole genome shotgun sequence.
ACCESSION   DATGJT010000620 DATGJT010000000
VERSION     DATGJT010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1329188"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VKX24_10675"
     CDS             <1..204
                     /locus_tag="VKX24_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08994.1"
                     /translation="LAEPAMAPARHNARRAAVVLSAMGERPDAVERVLGSAGFAPALA
                     RDAAFWAQEQLAAVAPAAQAAAA"
     gene            447..1211
                     /locus_tag="VKX24_10680"
     CDS             447..1211
                     /locus_tag="VKX24_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HLJ08995.1"
                     /translation="MISDETRLQEVAGWVRDSRAVVVLTGAGISTESGIPDFRGPQGV
                     WTKDPKAEKLSNIHHYMNDPEVRVASWQARLVHPAWTAQPNAAHRALADLERKGQVDT
                     LVTQNIDGLHQKAGSSPDRVIEIHGTMREVVCMACGERAPMERALDRVRAGEADPPCR
                     SCGGILKSATISFGQNLVAEDLARAEKAARTCDLFLALGTTLTVYPVAYLPEAALEAG
                     ARLVIANAEPTPYDPRADAVFRGNLGDVLPALVALV"
     gene            1321..2487
                     /gene="moeB"
                     /locus_tag="VKX24_10685"
     CDS             1321..2487
                     /gene="moeB"
                     /locus_tag="VKX24_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HLJ08996.1"
                     /translation="MANFRDLLKATKAQIREVTPEQAAQEHGRATFLDVREADEFEQG
                     TIPGSVFIPRGNLELVVEGKIPDKTARVIVYCAGGARSAFAARSLAELGYTDVVNLIG
                     GFNQWKNEGRDWVTPQTLSAEQRNRYHRHLLLPEVGEAGQQKLLASKVLLLGAGGLGS
                     PAALYLAAAGVGTIGIIDMDVVDASNLQRQILHNIDRIGERKVDSAKKTLTALNPDVN
                     VVTYDVRLGADNVLDIIDGYDLIVDGTDNFPTRYLVNDASLLKRIPVVHGSIFRFEGQ
                     ATVFVPYEGPCYRCLIPEPPPPELAPSCQEAGVLGVLPGIIGMIQAVEAVKLLLGKGE
                     PLIGRLLLYDALEQKFREVKYARDPACPACGDNPMRELLPEYTEASCAIAPRRQ"
BASE COUNT          355 a          936 c          881 g          319 t
ORIGIN      
        1 ctcgccgagc cggcgatggc ccccgcccga cacaacgccc gccgggccgc cgtcgttctc
       61 tccgccatgg gagagcggcc cgacgccgtg gagcgggtcc tcggaagcgc cggcttcgcc
      121 cccgccctgg cccgcgacgc cgcgttctgg gcccaggagc agctggccgc cgttgccccg
      181 gcagcgcagg ccgcggcggc ctgaccgccg cctcccccgg cgtgatcgcc gcctccccgg
      241 gcgtgaccgc ccgccgcccc cgggcgatcg ccgcctcacc cggggggtgc gaccggtggc
      301 ggtcgaggtg gcgtccacgg ccgtcgacgc ccgctcgccg caaccggtcg cggggtgcgg
      361 tcgcgccctc gccggccgcc gcaaccggtc gcggggtgcg gtgccgccgg ccgtccccgc
      421 cgccggcgcc ggtacgctcg gcggccgtga tcagcgacga gacccgcctg caggaggtcg
      481 ccgggtgggt gcgcgactcc cgggccgtcg tcgtactgac gggggcgggc atctcgaccg
      541 agtcggggat ccccgacttc cgggggccgc agggcgtgtg gacgaaggac ccgaaggccg
      601 agaagctctc gaacatccac cactacatga acgaccccga ggtccgggtg gccagctggc
      661 aggcccggct cgtccacccg gcgtggacgg cgcagcccaa cgccgcccac cgggcgctgg
      721 cggacctgga gcgcaagggc caggtcgaca cgctggtgac ccagaacatc gacgggctgc
      781 accagaaggc cggctcatcg ccggaccggg tgatcgagat ccacggcacc atgcgggagg
      841 tcgtctgcat ggcctgcggc gagcgggcgc cgatggagcg ggccctcgac cgggtccggg
      901 ccggcgaggc cgacccgccc tgccggtcct gcggcggcat cctgaagtcg gccacgatct
      961 ccttcgggca gaacctggtg gccgaggacc tggcccgggc ggagaaggcc gcccgcacct
     1021 gcgacctctt cctggctctg ggcacgacgc tcacggtcta tccggtggcc tacctgccgg
     1081 aggcggcgct ggaggccggc gcccgcctcg tgatcgccaa cgccgagccg accccctacg
     1141 acccccgggc cgacgccgtt ttccggggca acctcggcga cgtcctgccg gctctggtcg
     1201 ccctggtctg aggcgggcgg gaatgcggag cccttccggc gcgtttcccc gaatgctgac
     1261 cccggcggta gcattttaga gagccccggc cgcacgacgg cctctgatgg gagagacgac
     1321 atggccaact tccgcgacct tctgaaggcc acgaaggccc agatccgcga ggtgacaccg
     1381 gagcaggccg cccaggaaca cggccgggcg acgttcctcg acgtgcggga ggccgacgag
     1441 ttcgagcagg ggacgatccc cgggtcggtg ttcatccccc gcggcaacct ggagctggtc
     1501 gtcgagggga agatccccga caagaccgcc cgggtcatcg tgtactgcgc cgggggcgcc
     1561 cgctcggcgt tcgccgcccg gagcctggcc gagctcggct acaccgacgt ggtcaacctg
     1621 atcggcgggt tcaaccagtg gaagaacgag ggccgcgact gggtcacgcc gcagaccctg
     1681 tcggccgagc agcgcaaccg ctaccaccgg cacctcctgc tgcccgaggt gggcgaggcc
     1741 ggccagcaga agctgctcgc ctccaaggtc ctcctcctcg gcgccggcgg gctcggctcc
     1801 cccgccgccc tctacctggc ggcggccggt gtcggcacga tcggcatcat cgacatggac
     1861 gtcgtcgacg cctcgaacct ccagcgccag atcctccaca acatcgaccg gatcggagag
     1921 cgcaaggtcg actcggccaa gaagacgctg accgccctca accccgacgt gaacgtcgtg
     1981 acctacgacg tccgcctcgg cgccgacaac gtcctcgaca tcatcgacgg ctacgacctg
     2041 atcgtcgacg gcaccgacaa cttcccgacc cggtacctgg tcaacgacgc ctcgctgctc
     2101 aagcggatcc cggtcgtcca cggctcgatc ttccggttcg agggccaggc gacggtgttc
     2161 gtgccctacg agggcccctg ctaccgctgc ctcatccccg agccgccgcc gccggagctg
     2221 gcgccgtcgt gccaggaagc gggcgtcctc ggcgtgctgc cggggatcat cgggatgatc
     2281 caggcggtcg aggcggtgaa gctgctgctc ggaaagggag agccgctgat cggcaggctc
     2341 ctcctgtacg acgcgctgga gcagaagttc cgcgaggtga agtacgcgcg cgatccggcc
     2401 tgcccggcgt gcggggacaa cccgatgcgg gagcttctgc cggagtacac cgaggcgagc
     2461 tgcgcgatcg cgccgcggcg gcagtagccg t
//
LOCUS       DATGJT010000621         3992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1123518, whole genome shotgun sequence.
ACCESSION   DATGJT010000621 DATGJT010000000
VERSION     DATGJT010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3992
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1123518"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VKX24_10690"
     CDS             <1..180
                     /locus_tag="VKX24_10690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ08997.1"
                     /translation="PEQVRDHYVEEWRRMPSEYVVLIYHFAQQPKDAVIENMELWMEH
                     VKPALDEMTAHYEDR"
     gene            177..1145
                     /locus_tag="VKX24_10695"
     CDS             177..1145
                     /locus_tag="VKX24_10695"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005080917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HLJ08998.1"
                     /translation="MTLLGFGGEDVVRDYIAKYSNWGRWGSDDQLGALNYVGPEQVKA
                     AAGLVRQGKVVSMTLPYDLFGPQVGAFRANPLNLMTATGTDYLCGRQDPLPADWGPAY
                     TFGFADDVIVMPNQAGTQWDSLGHIFFEGKMFNGFDAGLVSAKGAERCSIAVTTERFV
                     MRGVFLDVARHKGVEALEPGYAISPADLDATAAAEGVEVRSGDCVIVRTGLLGQRRRK
                     WGDYCGGPAPGMSLHTAPWLAEHEVAAIATDTWGCEVRPNEIELFQPLHIVALVHMGV
                     HFGEIWDLEPISADCAADGVYEFLLSAAPLPITGAVGSPLTALAVK"
     gene            1154..2371
                     /locus_tag="VKX24_10700"
     CDS             1154..2371
                     /locus_tag="VKX24_10700"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ08999.1"
                     /translation="MDWSLSAEQRRWRDTARAYATEVVAPAAPGLDAEPDPEKAFSWA
                     LVEAASEYGLRLAPLPPAFGGGGTDFLTNAVMLEEIAAADMGMSVVLAQTWKFAQLLM
                     ELGTADQHERWLRRLADNPRGLMAASLTEPNGGSDNVLPYEGSDGGMQMRAERVDGGW
                     VLNGQKHYISNANRAEVLIAFARTRPDRPVRSGVTMFVVPADSPQVRYGVVHDKLGER
                     LANNSEIFYDDVFVPDGDLLGRENEGLADVARLLRGSNAYAAACTLGVARTAFERALA
                     YTAGRIQGGKPVLDHDDIGVAFAEMYARLEMARTYVFRAAWASDHAKPFDSKMAATPK
                     LVASQIAFEVTRESLEMFGGSGVMRETGMEKLLRDATIFLHSDGTNTVMRKKIANDLR
                     ARVGGPLDSLWDW"
     gene            2376..3440
                     /locus_tag="VKX24_10705"
     CDS             2376..3440
                     /locus_tag="VKX24_10705"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLJ09000.1"
                     /translation="MRAAVLERFGGDIAVVEVPDPGPPRPGDVLVAVEACGVGLTLER
                     ARTGALGGTVPRIVGHELGGTVAAVGPGVTGWQPGDRVTASFYLTCGGCPFCAGGRET
                     LCTAWRGYVGLHVEGALAEAVVLPAASLVAVPDGVGLDEAAIAADAIATPYHVFAERA
                     PVRPGDTVAVIGAGGGVGVHMALMARAFGARVVAVERDAAKEKRLGDYGFDVVWNPGD
                     DPDWADGLIGAAGGKVDVCVDTVASNATLANGVGVVGRAGTFVVVGFQPGTALALDPA
                     GLIIDEVTVTGSRYATRAEIARTLDLVAERRVEPVIGARFPLAEAGEAYRAMQRNEVF
                     GRIVVDTRPAVSAAPLTSPS"
     gene            3437..>3992
                     /locus_tag="VKX24_10710"
     CDS             3437..>3992
                     /locus_tag="VKX24_10710"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ09001.1"
                     /translation="MKVRIGVSLGIDGDTDPMMLHDAVVAMEELRFDSLWLAERISTT
                     TPDPVAGLGFAAARTRRLKLGTGVVILPGRNPAIVAKQLATLDRLSGGRLLVTFGLGG
                     EPGERAAFPIPPGARRGDVFDDSLDRVRRLTAGEDVDGVIVRPAPVQAPLEFWVAGSV
                     PEAQRRVGRLADGWLTSLLTPEEAA"
BASE COUNT          544 a         1467 c         1441 g          540 t
ORIGIN      
        1 ccggagcagg tccgcgacca ctacgtcgag gagtggcggc ggatgccgtc ggagtacgtc
       61 gtcctcatct accacttcgc ccagcagccg aaggacgccg tcatcgagaa catggagctc
      121 tggatggagc acgtgaagcc ggcgctcgac gagatgacgg cccactacga ggaccgatga
      181 ctctcctcgg cttcggcggc gaggacgtcg tccgggacta catcgccaag tactccaact
      241 ggggccgctg gggatccgac gaccagctgg gggccctcaa ctacgtcggc ccggagcagg
      301 tcaaggccgc cgccgggctc gtccgccagg gcaaggtcgt ctccatgaca ctgccctacg
      361 acctcttcgg gccgcaggtc ggcgccttcc gggccaaccc tctgaacctc atgaccgcca
      421 ccggcaccga ctacctgtgc ggccgccagg acccgctgcc ggccgactgg ggcccggcct
      481 acacgttcgg cttcgccgac gacgtgatcg tcatgcccaa ccaggccggc acgcagtggg
      541 acagcctcgg ccacatcttc ttcgagggca agatgttcaa cggcttcgac gccggcctcg
      601 tctcggccaa gggcgcggaa cgctgcagca tcgccgtcac caccgaacgg ttcgtcatgc
      661 ggggcgtctt cctcgacgtc gcccggcaca agggcgtcga ggccctcgaa ccggggtatg
      721 ccatcagccc ggccgatctc gacgccaccg ccgccgcgga gggggtggag gtccgcagcg
      781 gcgactgcgt catcgtgcgg acgggcctgc tcgggcagcg gcgcaggaag tggggcgact
      841 actgcggcgg tcccgccccc gggatgtcgc tccacaccgc gccgtggctg gccgagcacg
      901 aggtggcggc gatcgccacc gacacctggg gctgcgaggt gcggcccaac gagatcgagc
      961 tgttccagcc gctgcacatc gtggccctcg tccacatggg cgtccacttc ggggagatct
     1021 gggacctgga gccgatcagc gccgactgcg ccgccgacgg cgtctacgaa ttcctcctct
     1081 cggccgcgcc gctgccgatc accggcgcgg tcggttcccc gctcaccgcg ctggccgtca
     1141 agtagcccgc ccgatggact ggtcgctcag cgccgaacag cgccgttggc gcgacaccgc
     1201 ccgggcctac gccaccgagg tcgtggcacc ggccgccccg ggcctcgacg ccgaacccga
     1261 tcccgagaag gccttctcct gggcgctggt cgaggccgcc tcggagtacg ggctgcggct
     1321 ggcgccgctc ccgccggcct tcggcggcgg cgggaccgac ttcctgacca acgccgtcat
     1381 gctggaggag atcgccgccg ccgacatggg gatgtcggtg gtgctggccc agacgtggaa
     1441 gttcgcccag ctgctcatgg agctcggcac cgccgatcag cacgagcggt ggctgcggcg
     1501 cctggccgac aaccctcggg ggctgatggc ggcgtcgctc accgaaccca acggcggctc
     1561 cgacaacgtg ctgccctacg agggcagcga cggcggcatg cagatgcggg ccgagcgcgt
     1621 cgacggcggc tgggtcctca acgggcagaa gcactacatc tccaacgcca accgggccga
     1681 agtcctcatc gccttcgccc gcacccgccc cgaccgcccg gtgcggtcgg gagtgacgat
     1741 gttcgtcgtt ccggccgaca gcccgcaggt gcgctacggc gtcgtccacg acaagctcgg
     1801 cgagcggctg gccaacaact ccgagatctt ctacgacgac gtgttcgtcc ccgacgggga
     1861 cctgctgggc cgggagaacg agggcctggc cgacgtcgcc cggctgctgc ggggctccaa
     1921 cgcctacgcc gccgcctgca cgctgggcgt ggcgcgcacg gccttcgaac gggcgctggc
     1981 ctacaccgcc ggccggatcc agggcggcaa gccggtgctc gaccacgacg acatcggcgt
     2041 ggccttcgcc gagatgtacg cccggctgga gatggcccgc acctacgtct tccgggcggc
     2101 ctgggcctcg gaccacgcca agccgttcga ctccaagatg gccgccacgc cgaagctcgt
     2161 cgcctcccag atcgccttcg aggtcacccg ggagtcgctg gagatgttcg gcggctcggg
     2221 cgtcatgcgg gagacgggaa tggagaaact gctgcgggac gccacgatct tcctgcactc
     2281 cgacgggacc aacaccgtga tgcgcaagaa gatcgccaac gacctccggg cccgggtcgg
     2341 cggaccgctg gattcgctct gggactggtg aggtgatgcg ggcggcggtg ctggagcgct
     2401 tcggcggcga catcgccgtc gtcgaggtcc ccgatcccgg gccgccccgc ccgggcgacg
     2461 tcctcgtggc cgtcgaggcc tgcggcgtgg gcctgacgct ggagcgggcg aggaccggcg
     2521 ccctcggcgg gacggtgccc cgcatcgtcg gccacgaact cggcggaacg gtcgccgccg
     2581 tcgggccggg cgtgaccggc tggcagccgg gcgaccgggt cacggcgtcg ttctacctga
     2641 cctgcggcgg ctgcccgttc tgcgccgggg gacgggagac gctgtgcacc gcctggcggg
     2701 gctacgtcgg gctccacgtc gagggcgccc tggccgaggc ggtggtgctg ccggcggcgt
     2761 cgctggtggc ggtgcccgac ggcgtcggcc tcgacgaggc ggccatcgcc gccgacgcca
     2821 tcgccacgcc ctaccacgtc ttcgccgagc gggccccggt gcggcccggc gacaccgtgg
     2881 cggtcatcgg cgccggcggg ggagtgggcg tgcacatggc gctgatggcc cgggccttcg
     2941 gcgcccgggt ggtggccgtc gaacgcgacg ccgccaagga gaagcggttg ggggactacg
     3001 gcttcgacgt cgtgtggaac cccggcgacg accccgactg ggccgacggc ctcatcggcg
     3061 cggcgggcgg caaggtcgac gtctgcgtcg acaccgtggc gtcgaacgcc accctggcca
     3121 atggtgtcgg ggtcgtcggg cgggcgggca ccttcgtcgt cgtcgggttc cagccgggaa
     3181 cggcgctggc gctcgacccg gcgggcctga tcatcgacga ggtcaccgtc accggcagcc
     3241 gctacgccac ccgggccgag atcgcccgca cgctggacct cgtggcggag cggcgcgtcg
     3301 agccggtcat cggcgcccgc ttcccactgg ccgaggccgg cgaggcctac cgggccatgc
     3361 agcgcaacga ggtcttcggc cgcatcgtcg tcgacacgcg gccggcggtg agcgccgcac
     3421 cgttaacctc cccctcgtga aagtccgcat cggcgtcagc ctcggcatcg acggcgacac
     3481 cgacccgatg atgctccacg acgccgtcgt cgccatggag gagctccgct tcgactccct
     3541 gtggctggcc gagcggatca gcaccacgac gcccgacccc gtcgccggcc tcggcttcgc
     3601 cgccgcccgc acgcggcggc tgaagctcgg caccggcgtc gtgatcctcc ccggccgcaa
     3661 cccggcgatc gtggccaagc agctggccac gctggaccgg ctgtcgggcg gccgcctgct
     3721 cgtgaccttc ggtctcggcg gcgagccggg ggagcgggcc gcctttccca tcccgcccgg
     3781 agcgcgccgg ggcgacgtct tcgacgacag cctcgaccgg gtgcgccggc tcaccgccgg
     3841 ggaggacgtc gacggggtca tcgtccggcc ggcgccggtg caggcgccgc tggagttctg
     3901 ggtggccgga tcggtgccgg aggcccagcg ccgggtcggg cggctggccg acggctggct
     3961 gaccagcctg ctgacccccg aggaggcggc cc
//
LOCUS       DATGJT010000622         5159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_292810, whole genome shotgun sequence.
ACCESSION   DATGJT010000622 DATGJT010000000
VERSION     DATGJT010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5159
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292810"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..865)
                     /locus_tag="VKX24_10715"
     CDS             complement(92..865)
                     /locus_tag="VKX24_10715"
                     /inference="COORDINATES: protein motif:HMM:TIGR01460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HLJ09002.1"
                     /translation="MAAVVLDLDGVIWLGDELLPGAARAVDRFRAAGLDVGFMTNNSS
                     LPVGGYVEKLARMGITTEPSDVLTSALAAAELLAAGLAPGAKVLACSGPGVVEALEAK
                     GFEVVDAGPAEAVVVGWHRTFDFDRLDRASAAVRAGARFVATNLDATYPAPDGLLPGN
                     GSLVAAVATAAGRRPEVAGKPEPPTVALVRARFGDRGLVAGDRPSTDGALAAALGWPF
                     ALVVSTATLSGDERSDHDAAFVGPSLAALADKIVASLGA"
     gene            complement(881..1297)
                     /locus_tag="VKX24_10720"
     CDS             complement(881..1297)
                     /locus_tag="VKX24_10720"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLJ09003.1"
                     /translation="MAPRAGNEPGSSTGPDGSSDGPGEAYSRFQEGSRLLDSGNTHAA
                     VVALERARELEPEKGSIREALARAYFRSQRVEAARAEFEKVLELDPVNDYAHFGLGLC
                     LLRSGDRDGARGHLKIATIMRPDEEAYQDALRQASA"
     gene            1299..2549
                     /locus_tag="VKX24_10725"
     CDS             1299..2549
                     /locus_tag="VKX24_10725"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 domain-containing protein"
                     /protein_id="HLJ09004.1"
                     /translation="MPELFPFPGLRYQRAALRGADLADVTAPPYDVIDEEGRAQLEAA
                     HPHNAVHLILPRDVEPGDRYERARTTFEQWRADGILAPDDEPHLYVYRMAFTDETGGP
                     RRMIGVVGALELAPLGEGVYAHEKTLAKAKSDRLELLRATRANFDPVWGLSLAPGLSD
                     VLEPLANGEPAAACVDGDGVEHSLYPVAGEVVDRIRQMIAAEPLVIADGHHRYETALA
                     YQEERRAAGEEDPGADRIMMLVVELADDQLMVRPIHRLLRNVHHEFRGKLNFVGTVSP
                     MGPNTPDGVRHLLAEMDRTGSMGIVDGPGLALLTPKLDILKTGLEQLPEALRDVDATR
                     FVLMLGRMSLSIELPEVDYRHDALHVAEMVAKGAADAAILLRPATIDQIAMVAAAGLR
                     MAQKTTFFQPKPLTGLVFRSLDLG"
     gene            complement(2546..2983)
                     /locus_tag="VKX24_10730"
     CDS             complement(2546..2983)
                     /locus_tag="VKX24_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09005.1"
                     /translation="MKLRWSTFGGKLGLLFCVAGFAVIWAGWNGAAGYNDIRKQFPYL
                     ISGGIAGLALVVVGVGLMVVQSQRADRVQLEAYLTELRSILDRITAGPAGDGAAPDAA
                     TLVVVGPGSYHRPDCRLVAGRNLKTMTAEEASAAGLERCRVCG"
     gene            complement(3012..3722)
                     /locus_tag="VKX24_10735"
     CDS             complement(3012..3722)
                     /locus_tag="VKX24_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007883267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ09006.1"
                     /translation="MSLLVVEGLRVGYGFPVLMGIGFAVEEGETAVIFGLNGAGKTTT
                     VAAIAGLLTPEAGSIRFDGADITRTSAAERVALGIALVPEGRRVFPDLSVANNLRLGA
                     WVKRRHHKEVDEARALVFDYFPRLAERSEQPAGTLSGGEQQMLAIGRALMSRPRLLLV
                     DEASLGLSPALTQTVFSVVDRINDDGVTVVLVEQNVGVLPYADRALIMEKGTLVYQGS
                     GDEIHHASLRETYLGTPA"
     gene            complement(3719..4510)
                     /locus_tag="VKX24_10740"
     CDS             complement(3719..4510)
                     /locus_tag="VKX24_10740"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ09007.1"
                     /translation="MPVLEVERCSIRFGGVQAARDVTLRAGEWEIVSVIGPNGAGKTT
                     TFNIVTGFYRPDAGRVRFKGRDVTGLAVHERTALGMGRTFQNVGLVKGSTVRENLLTA
                     QHLEAGYSALAGMLGLPGTFAAERRLAARAEALAEILGLTELLDTRVAGLPYGVLKRV
                     ELGAVLATDPDLLLLDEPTSGMGPEEAHAFGATLLDLRREFDLTVVMIEHHVPLVAQV
                     CDYVYCLNFGELLAEGPPDEVRSNPEVIRAYLGQEADEVLQQGTS"
     gene            complement(4497..>5159)
                     /locus_tag="VKX24_10745"
     CDS             complement(4497..>5159)
                     /locus_tag="VKX24_10745"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLJ09008.1"
                     /translation="EESLFNIQSLTGGSAGQPAPKPAGFSTDLRYYYLCLAFLAAVIW
                     VDWRLMRTKGGRALLAVRENPKVAATNGVDVKVYTLMAFVVAGVFAGLGGALLAHNDT
                     FVVRDLFDFQLALVFVIMTVVGGLRNRTGVVLGSAFFSLVGYFFDKLFSGGLHVPGLK
                     VLPKEYVPIVIGPVLLLYTLTRHPGGVGQQIRPLQRWLRGGRFSFKDTHERDVRVTDA
                     RA"
BASE COUNT          753 a         1864 c         1851 g          691 t
ORIGIN      
        1 cggccgtcgg cctgttcctg cggggggcgg cccgcgccgc cccgccgccc ggcccgcccc
       61 cgcccgactg gggcttcagc ggcggaccgt actaggcgcc cagcgaagcg acgatcttgt
      121 cggccagcgc cgccaggctc gggccgacga aggcggcgtc gtggtcggac cgttcgtcgc
      181 ccgacagcgt ggccgtcgac accacgaggg cgaagggcca gcccagggcg gcggccaggg
      241 ctccgtcggt cgacgggcgg tcgccggcca ccaggccgcg gtcgccgaag cgggccctca
      301 ccagtgccac cgtcggcggt tcgggcttgc cggccacctc gggccggcgt ccggcggcgg
      361 tggccaccgc cgccacgagc gatccgttcc cgggcagcag accgtcgggg gccggatagg
      421 tggcgtcgag gttggtggcc acgaaacggg cgccggcccg gacggcggcc gacgcccggt
      481 cgagccggtc gaagtcgaac gtccggtgcc agccgacgac gaccgcctcg gcgggcccgg
      541 cgtcgacgac ctcgaacccc ttcgcctcca gcgcctcgac cacgcccggc ccgctgcagg
      601 cgaggacctt ggccccgggc gccaggccgg cggccagcag ttcggcggcg gccagggcgc
      661 tggtcaggac gtcggagggt tcggtggtga ttcccatccg ggccagcttc tcgacgtagc
      721 cgccgaccgg aaggctggag ttgttggtca tgaagccgac gtcgagccct gcggcccgga
      781 atcggtcgac ggcccgggcc gcgccgggca gcagctcgtc gccgagccag atgacgccgt
      841 cgagatcgag gacgaccgct gccacgagga atgacgttag ctacgccgag gcctgccgga
      901 gggcgtcctg gtaggcctcc tcgtcgggcc gcatgatcgt ggcgatcttg aggtggccgc
      961 gggcaccgtc ccggtcgccg gagcgcagca ggcacaggcc gaggccgaag tgggcgtagt
     1021 cgttgaccgg gtcgagctcg aggaccttct cgaactccgc ccgggccgcc tcgacccgct
     1081 gcgagcggaa gtaggcccgg gccagcgcct cccggatcga gcccttctcc ggctcgagct
     1141 cgcgggcccg ctccaaggcc acgacggcgg cgtgcgtgtt gcccgagtcg agcagccggc
     1201 tgccctcctg gaaacgggaa taggcctccc cgggcccgtc agaggacccg tcgggacctg
     1261 tgctagaacc gggttcgtta cccgctcggg gagccatggt gcccgaactc ttcccctttc
     1321 ccggcctccg ttaccaacgt gccgcgctcc gcggtgccga tctcgccgac gtgaccgccc
     1381 cgccgtacga cgtcatcgac gaagaaggcc gggcgcagct ggaggctgcc cacccccaca
     1441 acgccgtcca cctcattctc ccacgcgacg tcgagccggg ggaccgctac gagcgggccc
     1501 ggacgacgtt cgagcagtgg cgggccgacg ggatcctggc ccccgacgac gagccccacc
     1561 tctacgtcta ccggatggcc ttcaccgacg aaacgggcgg tccccggcgg atgatcggtg
     1621 tcgtcggggc cttggagctg gcgccgctcg gcgaaggtgt gtacgcccac gagaagacgc
     1681 tggccaaggc caagtccgac cggctggagc tgctccgggc gacccgggcc aacttcgacc
     1741 cggtgtgggg gctgtcgctg gccccggggc tgtcggacgt gctcgagccg ctggccaacg
     1801 gcgagccggc cgcggcctgc gtcgacggcg acggcgtgga gcactccctg tacccggtgg
     1861 cgggcgaggt cgtcgaccgc atccgccaga tgatcgccgc cgagccgctg gtgatcgccg
     1921 acggccacca tcgctacgag acggcgctgg cctaccagga ggagcggcgg gcggcgggcg
     1981 aggaggaccc cggcgccgac cgcatcatga tgctggtcgt cgagctggcc gacgaccagc
     2041 tgatggtccg gccgatccac cggctcctgc gcaacgtcca ccacgagttc cggggcaagc
     2101 tcaacttcgt cggcaccgtt tcaccgatgg gtcccaacac tcccgacggt gtccggcatc
     2161 tgctggccga gatggaccgg acggggtcga tgggcatcgt ggacgggccg gggttggcgc
     2221 tgctcacccc gaagctcgac atcctgaaga ccgggctcga gcagctgccg gaggcgctgc
     2281 gcgacgtcga cgccacccgg ttcgtcctca tgctcgggcg gatgtcgctg tcgatcgagc
     2341 tgccggaggt cgactaccgc cacgacgccc tgcacgtggc cgagatggtg gcgaagggcg
     2401 cggccgacgc cgccatcctg ctccggccgg cgacgatcga ccagatcgcc atggtcgccg
     2461 cggccggcct ccgcatggcc cagaagacga ccttcttcca gccgaagccg ctgacagggc
     2521 tggtgttccg ctcgctggac ctgggctagc cgcagacccg gcagcgttcg agccccgcgg
     2581 ccgacgcctc ttcggcggtc atcgtcttca ggttccggcc ggccaccagc cggcagtccg
     2641 ggcggtgata gctgccgggc ccgacgacga cgagcgtggc ggcgtccggg gcggcgccgt
     2701 cgccggccgg tccggcggtg atccggtcga ggatcgaccg cagctcggtg aggtatgcct
     2761 ccagctggac ccggtcggcc cgctggctct ggacgaccat gagcccgacg ccgaccacga
     2821 cgagggccaa cccggcgatg ccgcccgaga tgaggtacgg gaactgcttg cggatgtcgt
     2881 tgtagccggc ggcgccgttc cacccggccc agatgacggc gaagccggcc acgcagaaca
     2941 gcaggccgag cttgccgccg aacgtgctcc accgcagctt catcggccgg atcctctcat
     3001 gccggcctgg gtcacgccgg agtcccgagg tacgtctcgc ggaggctggc gtggtggatc
     3061 tcgtcgcccg agccctggta gacgagcgtg cccttctcca tgatcagcgc ccgatcggcg
     3121 taggggagga cgccgacgtt ctgctccacc agcaccacgg tcacaccgtc gtcgttgatc
     3181 cggtcgacca ccgagaagac cgtctgggtg agcgccggag agagcccgag cgacgcctcg
     3241 tcgaccagca gcagccgggg ccgcgacatc aacgcccggc cgatggccag catctgctgc
     3301 tcgcctcccg acagcgtccc ggccggctgc tcggaccgct ccgccaggcg ggggaagtag
     3361 tcgaagacca gagcccgcgc ttcgtcgacc tccttatggt gacggcgctt cacccaggcg
     3421 ccgagtcgga ggttgttggc caccgagagg tcggggaaga cgcgccggcc ctcggggacg
     3481 agggcgatgc cgagggccac gcgctccgcc gccgacgtcc tcgtgatgtc ggctccgtcg
     3541 aagcggatcg agcccgcctc gggcgtgagg agcccggcga tggccgccac cgtcgtggtc
     3601 ttgcctgcgc cgttgagccc gaagatcacc gccgtctcgc cctcctcgac ggcgaagccg
     3661 atccccatga ggacggggaa gccgtagccc acccgcaggc cctcgaccac gagcaggctc
     3721 acgacgtccc ctgctgcagc acttcgtcgg cttcctgccc gaggtaggcc cggatgacct
     3781 cggggttcga gcgcacctcg tccggtgggc cctcggccag cagctcgccg aagttcaggc
     3841 agtagacata gtcgcagacc tgggccacca gcgggacgtg gtgctcgatc atcaccaccg
     3901 tgaggtcgaa ctcccggcgg aggtcgagca gcgtggctcc gaaggcgtgg gcctcctcgg
     3961 gccccatgcc cgacgtcggc tcgtcgagca gcagcaggtc ggggtcggtg gcgaggacgg
     4021 cgccgagttc cacccgcttg aggacgccgt agggcagccc cgccacgcgg gtgtcgagga
     4081 gctccgtcag accgaggatt tcggccagcg cctcggcccg cgccgcaagg cgccgctcgg
     4141 cggcgaaggt tcccgggagg ccgagcatcc cggccagggc ggagtagccg gcctcgaggt
     4201 gctgggcggt gagcaggttc tcccgcacgg tggagccctt gaccagcccg acgttctgga
     4261 acgtgcgccc catgccgagg gcggtgcgct cgtggacggc gagcccggtc acgtcgcggc
     4321 ccttgaaccg cacgcggccg gcgtcgggcc ggtagaagcc ggtgacgatg ttgaaggtcg
     4381 tcgtcttccc ggcgccgttg ggcccgatga cgctgacgat ctcccattcc cctgcccgca
     4441 gggtgacgtc gcgggccgcc tgcaccccgc cgaagcggat cgagcagcgc tcgacctcaa
     4501 gcacgggcat cggtcacccg cacgtcgcgc tcgtgggtgt ccttgaacga gaaccgcccg
     4561 ccccgcagcc agcgctgcag cggacggatc tgctggccga cgccgcccgg gtgccgggtc
     4621 agcgtgtaga gcagcaggac cggcccgatg acgatgggga cgtactcctt cggcagcacc
     4681 ttcaggcccg ggacgtgcag cccgccgctg aacagcttgt cgaagaagta gcccaccagc
     4741 gagaagaacg ccgacccgag cacgacgccc gtccggttcc gcagtccgcc gaccacggtc
     4801 atgatcacga agacgagggc gagctggaaa tcgaagaggt cgcggacgac gaacgtgtcg
     4861 ttgtgggcca gcagcgctcc gccgaggccg gcgaagacgc cggccaccac gaaggccatg
     4921 agcgtgtaga ccttgacgtc gacgccgttc gtcgccgcca ccttcgggtt ctcccgcacg
     4981 gccagcagcg cccgtccgcc cttcgtccgc atcaggcgcc agtcgaccca gatgaccgcg
     5041 gccaggaagg ccaggcagag gtagtagtag cggaggtcgg tggagaagcc cgccggcttc
     5101 ggcgccggct ggccggccga gccgccggtc aggctctgga tgttgaacag gctctcctc
//
LOCUS       DATGJT010000623         2179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1222666, whole genome shotgun sequence.
ACCESSION   DATGJT010000623 DATGJT010000000
VERSION     DATGJT010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1222666"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VKX24_10750"
     CDS             <1..318
                     /locus_tag="VKX24_10750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014212641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09009.1"
                     /translation="CAKVLREVSYRALHIHGSLGTTNLTPLQAMYAGAPTMGIADGVD
                     EVHKATVARNVLKDYRPHDGLWPTEFLPAKREQARKKFADVIASEPDLASYADAVERR
                     AYA"
     gene            complement(396..683)
                     /locus_tag="VKX24_10755"
     CDS             complement(396..683)
                     /locus_tag="VKX24_10755"
                     /inference="COORDINATES: protein motif:HMM:NF014655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HLJ09010.1"
                     /translation="MTQTLEVVVTEEDVDKLVDDENLWAVIVWNDDVNTFAHVIKALV
                     EILNHSLARAEQLTNKIHNTGKAVVAFRPKEEATAIVQRFHARAIRATMEP"
     gene            793..>2179
                     /locus_tag="VKX24_10760"
     CDS             793..>2179
                     /locus_tag="VKX24_10760"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ09011.1"
                     /translation="MPTDGDHRLGRRPAPPTRPFPARRAAWRAALGIAAVTTVLVVGT
                     RADAATHREHGGTVTFAEPPGSPLNDIFPFDPVTSTSVNDVSQLQTLLWRPLSWFGSD
                     ETVARLDPARTLYRSVAYSDGAKVVTVKLKAYRWSDGYPLTSRDVEFSYDLYRDEKEI
                     WADYVPGEFPDNVASVRLPDRHTIVFTLTHPVNETWFTDDQLALITPMPQHAWDRTSA
                     LAPVGDADLTAAGAGAVFDFLDAEATDTATYATNPLWQVVDGPWKLSAFSVDGGATFV
                     PNPAFSGPVKPTIDQFVEVPFSTTADEVAALRAGGLDVGYLPVTDPGSAKGVEAAGYR
                     LAAWDDLAVAYGLYDFGNPAAGRLLSQLYIRQAIQRSEDQASIVRSVFGGLASPTTGP
                     VPLQPKSGLVSAYERSDPDRYDPAAARALLSAHGWRVRAGGTDVCERGGSGPGRCGAS
                     IAAGTRLRFTVL"
BASE COUNT          306 a          817 c          750 g          306 t
ORIGIN      
        1 tgcgccaagg tgctgcgcga ggtgagctac cgggcgctgc acatccacgg ctcgctgggc
       61 accaccaacc tgaccccgct acaggccatg tacgccggcg cgccgacgat gggcatcgcc
      121 gacggcgtcg acgaggtcca caaggcgacc gtggcccgca acgtcctgaa ggactaccgg
      181 ccccacgacg ggctgtggcc gaccgagttc cttccggcga agcgggagca ggcccgcaag
      241 aagttcgccg acgtgatcgc cagcgagccg gacctcgcca gctacgccga cgcggtggag
      301 cgccgcgcgt acgcgtaagg cccgcgccga ccgaccggca ggaccagcac ccggacgctg
      361 agggccgcgc cacggggtgg cgcggctcga agcccctacg gctccatcgt ggcccggatg
      421 gcccgggcgt ggaaccgctg cacgatggcc gtcgcctcct ccttgggccg gaaggcgacg
      481 acggccttgc cggtgttgtg gatcttgttc gtcagctgct cggcccgggc gagcgagtgg
      541 ttcaggatct cgaccagcgc tttgatgacg tgggcgaacg tgttgacgtc gtcgttccag
      601 acgatcaccg cccagaggtt ttcgtcgtcg acgagcttgt cgacgtcctc ttcggtgacg
      661 accacctcga gcgtctgagt catgacggct cctgctcgct cgaccagcac cttcatgcta
      721 cccggtgggc tcgcgccggc cgggggacgc gaccggcccg ctggggccgc cggtcgctcg
      781 tgcgctgatc cggtgcccac tgacggcgac caccggctgg gccgacgccc ggctccgccg
      841 acacgaccgt tcccggcgcg tcgcgccgcc tggagggccg ccctcggcat cgccgccgtg
      901 acgaccgtgc tcgtcgtcgg gacccgtgcg gacgccgcga cgcaccggga gcacggcggc
      961 acggtgacct tcgccgagcc gccggggtcg ccgctcaacg acatcttccc cttcgacccc
     1021 gtcaccagca cctcggtgaa cgacgtctcc cagttgcaga cgctcctgtg gcgccccctc
     1081 agctggttcg ggtcggacga gacggtggcc cggctcgacc cggcgcgcac gctctaccgg
     1141 tcggtggcct actccgacgg agccaaggtg gtgacggtca agctgaaggc gtaccgatgg
     1201 tcggacgggt acccgctcac gagccgcgac gtcgagttct cctacgacct ctaccgcgac
     1261 gagaaggaga tctgggccga ctacgtgccc ggcgagttcc ccgacaacgt ggcctcggtc
     1321 cggctcccgg accgccacac gatcgtgttc accctcaccc accccgtcaa cgagacctgg
     1381 ttcaccgacg accagctcgc cctcatcacg cccatgcccc agcacgcgtg ggaccggacc
     1441 tcggcgctgg ccccggtcgg cgacgccgat ctcacggcgg ccggcgcggg ggcggtcttc
     1501 gacttcctcg acgccgaggc gacggacacg gcgacctatg ccaccaaccc gctctggcag
     1561 gtggtcgacg ggccgtggaa gctcagcgcg ttcagtgtcg acggtggggc caccttcgtc
     1621 ccgaaccccg cgttctccgg cccggtgaag cccaccatcg accagttcgt cgaggtgccc
     1681 ttctcgacga cggccgacga ggtggccgcg ctccgcgccg gggggctgga cgtcgggtac
     1741 ctgcccgtca ccgatcccgg ctccgccaag ggggtggagg cggccggcta ccggctcgcg
     1801 gcctgggacg acctcgccgt cgcctacggc ctctacgact tcgggaaccc ggcggccggc
     1861 cgcctcctct cgcagctgta catcaggcag gccatccagc ggagcgagga ccaggcgagc
     1921 atcgtgcgca gcgtcttcgg cggcctcgcg tcaccgacga ccgggccggt cccgctgcaa
     1981 ccgaagagcg gcctcgtctc ggcctacgag cgctccgacc ccgatcgcta cgacccggcc
     2041 gcggcgaggg cgttgctcag cgcgcacggc tggcgggtac gggcaggcgg aaccgacgtg
     2101 tgcgagcggg gcggcagcgg tcccgggcga tgcggcgcca gcatcgccgc cgggacccgg
     2161 ctgcggttca ccgtgctgt
//
LOCUS       DATGJT010000624         2745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_706933, whole genome shotgun sequence.
ACCESSION   DATGJT010000624 DATGJT010000000
VERSION     DATGJT010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2745
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706933"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1124)
                     /locus_tag="VKX24_10765"
     CDS             complement(<1..1124)
                     /locus_tag="VKX24_10765"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HLJ09012.1"
                     /translation="MAHVAQALLDEIADRIRTAGPLPFDAYMRLALYDPERGYYATRV
                     PGEGGHYGTSPSVSPWFGRLVVRELEAMWRALGQPATFTVIEVGAGRADLAASALAGA
                     EEPFSASLHWRIVEQFEAVATLQARRLGAAAGRVAWSSRLGDPPAAGGCVLAHEVLDN
                     FPVHLLEQPPPPEVPREIYVALEGARLVEQPGPPSDRRLIGGQAAGRRRFEVCTEIEP
                     WLAEASKAIERGYLLLIDYGDLEDDLWAKNPEGTIVTYGADGFGHDPLADPGERDITA
                     DVNFSAVERAAARCGFARQLFATQRDWLAGLGLPEVAARLEAAADDAWRQGRSGEAMA
                     AEEELALLRTLSARMGLGDIMVFRAAKDAPLPGPAPTPAPA"
     gene            1519..2544
                     /locus_tag="VKX24_10770"
     CDS             1519..2544
                     /locus_tag="VKX24_10770"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ09013.1"
                     /translation="MSPAPRDEWREILAADPFALESQSPEWAEAAVAVGRVNDVSRLY
                     ELAGGRRIVVPMLRRRPTAGRAAIDGSNLRGWGVGGMLAPGGPRPAEVRAVLADLARR
                     TAIRQTLWPNPLEPEGWEGLAPAGAVIKPRVGHAVDLEGGFEQVWSKRAASSSRRGAR
                     HAEKEGVTIESGTAGALLGEFYGLIAQAVERWARIQHEPQRLASWRHERKDPRAKFEA
                     IARCLGERCRIWVARVDGRPAASMMVLTGNNAYDYRAAMDEDFMKSRANDLLLRHSLE
                     QACRDGCRYYYMGDSGQSASLAQFKERFGATPFRYDEYRFERAPLTPLENAAKGAVKR
                     LLKFKDG"
     gene            complement(2632..>2745)
                     /locus_tag="VKX24_10775"
     CDS             complement(2632..>2745)
                     /locus_tag="VKX24_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011593749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HLJ09014.1"
                     /translation="ERDEIFERQKELWPGFAEYEEKTKGIREIPVVVLDPR"
BASE COUNT          379 a         1007 c          996 g          363 t
ORIGIN      
        1 gccggggccg gcgtgggggc cggccccggc aggggtgcgt ccttcgccgc ccggaacacc
       61 atgatgtcgc cgaggcccat ccgggccgac agcgtgcgca gcagcgccag ctcctcctcc
      121 gccgccatcg cctcaccgga gcggccctgg cgccaggcgt cgtcagcggc ggcctcgagc
      181 cgtgcagcaa cctcgggcag gccgaggcca gcgagccagt cccgctgggt ggcgaacagc
      241 tggcgggcga agccgcagcg ggcggcggcc cgctcgaccg ccgagaagtt gacgtcggcg
      301 gtgatgtccc gctcgccggg gtcggccagc ggatcgtgcc cgaagccgtc ggcaccgtag
      361 gtcacgatcg tgccctcggg gttcttggcc cacaggtcgt cctcgaggtc gccgtagtcg
      421 atcagcagca ggtagccccg ctcgatcgcc ttgctcgcct ccgccagcca cggctcgatc
      481 tcggtacaca cctcgaaccg gcggcggccg gcggcctgcc ccccgatcag gcgacgatcg
      541 gacggcgggc cgggctgctc caccagccgg gcgccctcca gggcgacgta gatctcgcgg
      601 ggcacctcgg gcggcggcgg ctgctccagc aggtgcaccg ggaagttgtc gagcacctca
      661 tgggcgagga cgcacccccc ggccgccggg ggatcgccca gccgcgacga ccacgccacc
      721 cgcccggcgg cagcccccag ccggcgggcc tggagggttg ccaccgcctc gaactgctcg
      781 acgatccgcc agtgcagcga cgccgagaag ggttcttcgg cgcccgccag cgccgaggcg
      841 gcgaggtcgg cccggccggc ccccacctcg atcacggtga acgtggcggg ctggccgagc
      901 gcccgccaca tggcttccag ctcgcggacg acgagccggc cgaaccaggg cgacaccgag
      961 ggcgaggtcc cgtagtggcc cccctccccc gggacccggg tggcgtagta cccgcgctcg
     1021 gggtcgtaga gcgccagccg catgtaggcg tcgaagggaa gcggccccgc ggtacggatg
     1081 cggtcagcga tctcatcgag cagcgcctgc gccacgtgcg ccacctgcgc cgcgtcaacg
     1141 gggggcggcg gcccaccgta gggcagctga gcgtgcggcg ccccgccttg cgggcggcca
     1201 tccgggggtc cggccgcccg gtggccggcc agtcatgaaa aaatcttcag gtgagtgggc
     1261 tttggaccgg cacatgccga tatctcctac actgggcgac cgaaccgatc ctggtcgcag
     1321 ttccgttggg gatcctcgtg tgtacggtgg gcgtcgcacg ggtcattctg ccaccgtccg
     1381 gatagaggcc ggcctgccat gtcgatcgaa gcagaccgac ccgccccgcc cgcgcaggcg
     1441 atgccgccgg cgccgggtgc cccggaaccg cccaaggaac cggaatcccc gacggccccc
     1501 gccgtcatcg tccgccgggt gagcccggcc ccccgcgacg agtggcggga gattctcgcc
     1561 gcagacccgt tcgcgctgga atcgcagtcc ccggagtggg ccgaggcggc ggtcgccgtt
     1621 ggccgggtca acgatgtcag ccggctctac gaactcgctg gcgggcgccg gatcgtcgtc
     1681 ccgatgctcc gccgccgacc gaccgcaggg cgggcggcga tcgacgggtc gaaccttcgg
     1741 ggttgggggg tcgggggcat gctggccccg ggtggccccc ggccggccga ggtgcgggcg
     1801 gtgctcgccg atctcgcccg gcgcaccgcc atccgccaga ccctgtggcc caacccgctg
     1861 gagccggagg gctgggaggg actggccccg gcgggcgcgg tgatcaagcc ccgcgtcggt
     1921 cacgccgtcg acctggaggg tggcttcgag caggtgtggt ccaagcgcgc cgccagttcg
     1981 tcgcggcggg gcgcccgcca cgccgagaag gagggcgtga cgattgagtc cggcaccgcc
     2041 ggggcactcc tgggcgagtt ctacggcctg atcgcccagg cggtcgagcg gtgggcccgg
     2101 atccagcacg agccgcagcg gcttgcctcc tggcgccatg agcgcaagga tccccgggcc
     2161 aagttcgagg cgatcgcccg ctgcctcggc gagcgctgcc gcatctgggt cgcccgggtc
     2221 gacggtcgcc cggcggcctc gatgatggtg ctgaccggca acaacgccta cgactaccgg
     2281 gcggcgatgg acgaggactt catgaagtcc cgggccaacg acctcctgct ccgccactcg
     2341 ctggagcagg cgtgcaggga cgggtgccgc tactactaca tgggcgactc gggccagtcg
     2401 gcctcactgg cccagttcaa ggagcgcttc ggcgccacgc cgttccgcta cgacgagtac
     2461 cgcttcgagc gggccccgct gacccctctg gagaacgccg ccaagggggc cgtgaagcgg
     2521 ctgctgaagt tcaaggacgg gtagcggcgg cccggccccc acccggcttt ccttaactac
     2581 tgcccaacgt aattctgtgt agaaacggcg cggcaaggaa ggggccgccc cttagcgggg
     2641 gtcgagcacc accaccggga tctctcggat gcccttggtc ttctcttcgt actcggcgaa
     2701 gcccggccag agttctttct gccgctcgaa gatctcgtcg cgctc
//
LOCUS       DATGJT010000625         4055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_85767, whole genome shotgun sequence.
ACCESSION   DATGJT010000625 DATGJT010000000
VERSION     DATGJT010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4055
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85767"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VKX24_10780"
     CDS             complement(<1..327)
                     /locus_tag="VKX24_10780"
                     /inference="COORDINATES: protein motif:HMM:NF021487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HLJ09015.1"
                     /translation="MLAVLKKAMGVLQARGIPFALAGSMACWALGGPPSRHDVDLVIV
                     RADVERALEALGAAGFRIERPPEGWLVKAFDDDILVDLIWAPMGLVVTTEMLESAGLV
                     NVDGMPV"
     gene            326..649
                     /locus_tag="VKX24_10785"
     CDS             326..649
                     /locus_tag="VKX24_10785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09016.1"
                     /translation="MRGSAARSGINERVPWGERRQTRPSAGESADGRRGSTFRSTAEN
                     VDTEEAVMAERGRGGPGAEPYEGEEAEAPAEDFGAVDPDELTGPGGRLPAVDGLTGAD
                     DPKAG"
     gene            complement(618..2435)
                     /locus_tag="VKX24_10790"
     CDS             complement(618..2435)
                     /locus_tag="VKX24_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013676383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ09017.1"
                     /translation="MVLGSIAVAVPAVTIPARATPPVHSAATPIRHLVVIFQENVSFD
                     HYFGTYPVAANTSGQPFDAVKKTPAVNGLADTPGAGGAGTLLTNNPNRDAAGKPANPQ
                     RLDPADINDVLTCDQDHDYNDEQKAFDGGAMDKFVTEVGTDGGSKSPTGRPCQATDVM
                     DYYDGNTVTALWNYAQHFAMSDNSFGTTFGPSSPGAINLVSGDTGGVGKTINGADTDG
                     DTVADGQGGPTLVSDAQPYWDDCSTRDDAALTGQNIGNELNGAGLSWGWFEGGFRPTT
                     SFATATGGKQPTSVFTPDEFKGRFAAAPASDQGLCNAVHPVGAAVGGTGGTLAGGTNY
                     GNKDDYIPHHEPFQYYSSTANPHHLPPASLSAIGTDTQTFTKDGPQFDTANHQYDMSD
                     FDALVGAIDHGYLSPDRLPAVSFLKAPGYEDGHGAYSDPIDEQQFITREVNALEDSPA
                     WSSTAVVVAYDDSDGWYDHAFSGIHNASNTANVATPPGPQDFLTGTGLCGDTEKQPPL
                     AGQNGRCGYGPRLPLLVISPWARQNSVDHTLTDQSSVLRFVEDNWKLPRIKGSFDAVA
                     GSLDGLFDFHGPQGAAPKLYLDPTTGRPDVTPPSGRRRR"
     gene            2763..3029
                     /locus_tag="VKX24_10795"
     CDS             2763..3029
                     /locus_tag="VKX24_10795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09018.1"
                     /translation="MHLDDAPPPTGGTITDGTVLTGDAGLPARRPRLAAVLRMVLEHL
                     DSGAVVAATPAEVRLALRLQGALAAFDVSSRVWSDPLPSGGDAG"
     gene            complement(3049..3498)
                     /locus_tag="VKX24_10800"
     CDS             complement(3049..3498)
                     /locus_tag="VKX24_10800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09019.1"
                     /translation="MVVPFLLHQVLDYLAGLYLLQAGSKTGGRAATVCYVAGAIVLLA
                     ATLSGKPLGGGPISRPLHRVVDIVVVLGLVATPFVFGLTDETTTVVRLEGLAVVLGAV
                     VWFTKYARPAPRNFRETGRAIKAHGPRVAGQMIGRRMSGKRRPPDAS"
     gene            3731..>4055
                     /locus_tag="VKX24_10805"
     CDS             3731..>4055
                     /locus_tag="VKX24_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09020.1"
                     /translation="MRSCGVPDISTGTRTCTYTFAHTDTIETFVVPATTKGPIQITAT
                     GAPGFGEDATKSRGAVVTGTFNFLSGTPLFVVVGGDGYYDGYNGGVGGGGGASDIRLT
                     MPDLQH"
BASE COUNT          567 a         1361 c         1526 g          601 t
ORIGIN      
        1 caccggcatc ccgtcgacgt tgacgagccc ggccgactcc agcatctcgg tggtgaccac
       61 gagacccatc ggcgcccaga tcaggtcgac gaggatgtcg tcgtcgaacg ccttgaccag
      121 ccagccctcc gggggccgct cgatccggaa cccggccgcc cccagggcct ccagggcccg
      181 ttcgacgtcg gcccggacga tgacgaggtc gacgtcgtgg cgggacggcg gcccgcccag
      241 cgcccagcag gccatgctcc cggccagggc gaaggggatc cctcgcgcct gcagcacccc
      301 catggccttc ttcaggacgg cgagcatgcg gggatcggcg gcgcggtcgg gcatcaacga
      361 gcgcgttccc tggggcgagc gccgacaaac ccgcccgtcc gccggggaat cggcggacgg
      421 gcggcggggt agcaccttcc ggagcacggc ggagaacgtc gacaccgagg aggcggtcat
      481 ggcggagcgc ggcaggggtg ggcccggagc ggagccctac gagggagaag aggcggaggc
      541 gcccgccgag gacttcggcg cggtcgaccc tgacgagctg accggccccg gcgggcgcct
      601 tccggcggtg gacgggctta ccggcgccga cgacccgaag gcggggtgac gtcgggccgc
      661 ccggtggtcg ggtcgaggta gagcttcgga gcggcgccct gcgggccgtg gaagtcgaac
      721 agcccgtcga gcgatccggc cacggcgtcg aacgacccct tgatccgggg cagcttccag
      781 ttgtcctcca cgaagcggag aaccgacgac tggtcggtca gcgtgtggtc gacggagttc
      841 tggcgggccc agggtgagat gaccagcagc ggcaggcggg gcccgtagcc gcagcggccg
      901 ttctggccgg ccagcggcgg ctgcttctcc gtgtcgccgc agaggccggt accggtgagg
      961 aagtcctgcg gaccgggcgg cgtcgccacg ttggccgtgt tcgaggcgtt gtggatgccg
     1021 ctgaaggcgt ggtcgtacca gccgtcggag tcgtcgtagg cgacgaccac cgccgtgctc
     1081 gaccaggccg gcgagtcctc cagggcgttg acctcccggg tgatgaactg ctgctcgtcg
     1141 atggggtcgg agtaggcgcc gtgcccgtcc tcgtagccgg gggccttgag gaagctcacc
     1201 gccggcaggc ggtcgggcga caggtacccg tggtcgatgg ccccgacgag ggcgtcgaag
     1261 tccgacatgt cgtactggtg gttggccgtg tcgaactgcg ggccgtcctt ggtgaacgtc
     1321 tgcgtgtcgg tgccgatggc cgacagcgag gccggcggca ggtggtgggg gttggcggtc
     1381 gaggagtagt actggaacgg ctcgtggtgc gggatgtagt cgtccttgtt gccgtagttg
     1441 gtgccgccgg cgagggtgcc gccggtcccg ccgaccgccg ccccgacggg gtgcacggcg
     1501 ttgcacaggc cctggtccga cgccggagcg gcggcgaacc ggcccttgaa ctcgtcaggg
     1561 gtgaagacgc tggtcggctg cttgccgccc gtcgccgtgg cgaagctcgt tgtcggccgg
     1621 aacccgccct cgaaccagcc ccagctgagc ccggcgccgt tgagctcgtt gccgatgttc
     1681 tggcccgtga gggcagcgtc gtcgcgggtc gagcagtcgt cccagtacgg ctgggcgtcg
     1741 gagaccagcg tggggccgcc ctggccgtcg gccacggtgt cgccgtcggt gtcggcgccg
     1801 ttgatcgtct tgccgacgcc gccggtgtcg cccgagacca ggttgatcgc ccccggcgag
     1861 gacgggccga acgtcgtccc gaaggagttg tcgctcatgg cgaagtgctg ggcgtagttc
     1921 cacagcgccg tcaccgtgtt gccgtcgtag tagtccatga cgtcggtggc ctggcagggc
     1981 cggccggtcg ggctcttcga tccgccgtcg gtgccgacct cggtgacgaa cttgtccatc
     2041 gccccgccgt cgaaggcctt ctgctcgtcg ttgtagtcgt ggtcctggtc gcaggtcagg
     2101 acgtcgttga tgtccgccgg gtcgagacgc tgcggattgg ccggcttgcc ggcggcgtcg
     2161 cggttgggat tgttcgtcag cagcgtgccg gccccgcccg cgcccggcgt gtcggcgagg
     2221 ccgttgacgg ccggcgtctt cttgaccgcg tcgaacggct ggccggacgt gttggcggcg
     2281 accggatagg tgccgaagta gtggtcgaac gacacgttct cctggaagat caccaccagg
     2341 tgtctgatcg gtgtggcggc cgagtggacc ggaggcgtcg cccgggccgg gatcgtgacc
     2401 gccggaacgg ccaccgcaat ggaccccagc accatcgcga cgcgacgagc gcccgtgttc
     2461 aaggtcgtgt accccttcac tgtgtccgcc cctggcaggc gggttcccgt cgaagatagg
     2521 aaacccaaat ggagtcgtcc cgacggcgcg tcggtcccgg cgtgacatcg gagtgaacca
     2581 acggccatcg attgccgcaa atgggtcaaa ggggacgggt cgcccggtct gccgccggcc
     2641 gccggagacg gcggccgttg cggcggttga acacggggcg gttcgaccgg cctgacggac
     2701 tgtcaatggc ggcggcggta ttcatcaaat gacacgggtc ggggaggtac cgttggaaat
     2761 cgatgcacct cgacgacgcc ccgcccccga ccggcggcac gatcaccgat ggaacggttc
     2821 tcaccgggga cgccgggctt ccggcccgcc ggccgcggct ggccgccgtc ctgcggatgg
     2881 tgctcgagca cctcgactcc ggagccgtcg tggccgccac gccggccgag gtccggctgg
     2941 cgctgcgcct ccagggggcg ctggccgcct tcgacgtctc gtcccgggtc tggagcgatc
     3001 cgctgccgag cggcggcgac gccggctgag cccggcgggg cgggtcgctc aggaggcgtc
     3061 gggcggccgg cgcttgccag acatccgccg gccgatcatc tgacccgcca cccgggggcc
     3121 gtgcgccttg atggcccggc ccgtctcccg gaagttgcgg ggggccggac gggcatactt
     3181 ggtgaaccac accaccgccc ccaggactac cgccagcccc tccagccgca ccacggtggt
     3241 ggtctcgtcg gtcaggccga acacgaacgg cgtcgcgacc agcccgagga cgacgacgat
     3301 gtccacgacc cggtgcagcg gccgggagat gggcccgccg cccagtggct tcccactcag
     3361 cgtcgcggcg agcaggacga tggcgccggc gacgtaacag accgtggcgg cccgcccgcc
     3421 cgtcttgctc ccggcctgga gcaggtagag gccggcgagg tagtcgagca cctggtggag
     3481 gaggaacgga acgaccacgg agcgtcctcg tccaccgggc atgggggaaa tggtaggggg
     3541 ccggctgccc ggcggcgtat tttagaaatc ttgaggatgg ccgatttgag ccgctctgtg
     3601 aatccgaccg gccggacggg tagtctcctc ctctgtgaac gctcgtgtat gggccacggt
     3661 catggcgctc ggtctcttcg gggggcttgg agtagccccg agtcaggctc ggacggccga
     3721 gccacacgag gtgcggtcct gcggggtccc agacatcagc accgggacga ggacgtgcac
     3781 gtacacgttc gcccacaccg acaccatcga gaccttcgtg gtgccggcca cgaccaaggg
     3841 gccgatccag atcaccgcca ccggcgcccc cgggttcggt gaggacgcca ccaagtcccg
     3901 cggggccgtg gtcaccggga cgttcaactt cctgagcggc acgccgctgt tcgtcgtcgt
     3961 cggcggcgac ggctactacg acggctacaa cggcggggtc ggcggcgggg gcggggcctc
     4021 cgacatccgg ctcacgatgc ccgacctcca gcacc
//
LOCUS       DATGJT010000626         2339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_707245, whole genome shotgun sequence.
ACCESSION   DATGJT010000626 DATGJT010000000
VERSION     DATGJT010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707245"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..482
                     /locus_tag="VKX24_10810"
     CDS             63..482
                     /locus_tag="VKX24_10810"
                     /inference="COORDINATES: protein motif:HMM:NF014132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HLJ09021.1"
                     /translation="MADIGSRDELAAMIEGKSDDEISAGVAERGTDQVLGQIFDHMAK
                     EAFRPDRAGNQSAIVGWDIAAADGTHSFQLKVADGTCTVVPGNAEAARVTLGMALPDF
                     LRFVTGKLDGMQAFMTGKLKLSGDMMFAQSMQAWFAS"
     gene            complement(496..1449)
                     /locus_tag="VKX24_10815"
     CDS             complement(496..1449)
                     /locus_tag="VKX24_10815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012237693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HLJ09022.1"
                     /translation="MRALHFDGRRLACVETAAPSAGPGEAIVAVRLAGICSTDLQILA
                     GYMGFTGIPGHEFVGEVVEGPARRVGRRVVGEINYACGQCATCRRGLGRHCPHRRVMG
                     ILGADGAFAEHLALPEANLHAVPDGVTDEAAVFTEPLAAAFSILEQVAVGPGMAVTVL
                     GDGKLGLLCAQVLAATGASVALVGKHAANLALVASQGVAGVLVADWRPGAAADCVVEA
                     TGSAAGLELAMAAVRPRGMLVLKSTVAEPHWLSLAPLVINEVTVVGSRCGLFPPALAA
                     LAAGSVAVTPLIDATYPLADGIAAVAHAARPGVRKVLLAAG"
     gene            complement(1470..>2339)
                     /locus_tag="VKX24_10820"
     CDS             complement(1470..>2339)
                     /locus_tag="VKX24_10820"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HLJ09023.1"
                     /translation="AVKAGVTVLEGHAFDGTLADRADHVEVGLDGHAPVAARYVIAAD
                     GMWSPVRKALGAGPSGYLGEWHAFRQYFTGVPDRRLWILFEPDLLPGYAWVFPVAGGR
                     ANVGFGLPRRPGVSVRPMAAQWRELLQRPALRALLGSAEPEGQHRAWPIPADIGRAPL
                     SAGRVLFAGDAAGATDPMTGEGIAQALVTGVLAAEAVAAEGDDPAAVGRRYGAAVEHH
                     LVADLRFAAALAAVLRSRAGARAAVRAAGLTPWTRRHFARWMFEDYPRALVLTPSRWR
                     RGVFTGPGAYRAA"
BASE COUNT          332 a          844 c          913 g          250 t
ORIGIN      
        1 cgcgggggca cggccgtcgg ctaagctacc gcgcggtaac tacgacccca ggagggattc
       61 gcatggccga catcgggagc cgcgacgaac tggccgccat gatcgagggc aagtccgacg
      121 acgagatcag cgccggcgtg gccgagcggg gtaccgacca ggttctcggc cagatcttcg
      181 accacatggc caaggaggcc ttccgcccgg atcgggccgg gaaccagagc gcgatcgtcg
      241 gctgggacat cgccgccgcg gacggcaccc acagctttca gttgaaggtg gccgacggga
      301 cgtgcaccgt cgtccccggc aacgccgagg cggcccgtgt cacgctcggc atggccctgc
      361 ccgactttct ccgcttcgtc accgggaagc tcgacgggat gcaggccttc atgaccggca
      421 agctgaagct ctccggcgac atgatgttcg cccagtcgat gcaggcctgg ttcgcctcgt
      481 agccggtgag tccgctcacc cggcggcgag caggaccttg cggacgccgg ggcgggcggc
      541 gtgggccacg gccgcgatcc cgtcggccag cgggtaggtg gcgtcgatca gcggcgtgac
      601 ggccaccgag ccggcggcca gggcggccag ggccggcggg aagagcccgc aacgggaacc
      661 gacgaccgtg acttcgttga tcaccagcgg agccagcgac agccagtgcg gttcggccac
      721 cgtgctcttg agcaccagca tcccccgagg gcggacggcg gccattgcca gctccaggcc
      781 ggcggcggag ccggtggctt ccacgacgca gtcggcggcg gcgccgggcc gccagtcggc
      841 gacgagaacg ccggcgacgc cctgcgaggc gacgagggcc aggttggcgg catgcttgcc
      901 gacgagggcg accgaggcgc cggtggcggc cagcacctgg gcgcagagca ggccgagctt
      961 gccgtcgccg agaacggtga cggccatccc gggaccgacc gccacctgtt cgaggatcga
     1021 gaacgccgcc gccagcggct cggtgaagac ggccgcctcg tcggtcacgc cgtcgggcac
     1081 ggcgtggagg ttggcctccg ggagagcgag gtgctcggcg aaggcgccgt cggccccgag
     1141 gattcccatg acccgccggt gggggcagtg gcggccgagg cctcgccggc aggtggcgca
     1201 ttggccgcag gcgtagttga tctcgccgac cacccgccgc ccgacccgtc gggccggccc
     1261 ctcgacgacc tcgccgacga actcgtggcc ggggatcccg gtgaagccca tgtacccggc
     1321 caggatctgc aggtcggtgg agcagatgcc ggccagccgg accgcgacga tggcctcgcc
     1381 gggcccggcg gacggcgccg cggtctccac gcaggcgagc cggcggccgt cgaagtgcag
     1441 ggctcgcatc gccgccacgc cgggtgccgt caggccgccc ggtaggcgcc cggaccggtg
     1501 aagacccccc gccgccaccg cgacggcgtg agcacgagcg cccggggata gtcctcgaac
     1561 atccagcggg cgaagtgccg gcgggtccag ggggtcagcc cggcggcccg cacggcggcc
     1621 cgggcccccg cccgggaccg gagcacggcg gcgagggcgg cggcgaagcg gagatcggcg
     1681 acgaggtggt gctcgacggc ggccccgtag cggcggccga ccgcggcggg gtcgtcgccc
     1741 tcggcggcca ccgcctcggc ggcgaggacg ccggtgacga gcgcctgggc gattccttcg
     1801 ccggtcatcg ggtcggtggc cccggccgcg tcgccggcga agagcacccg gccggccgac
     1861 agcggggccc ggccgatgtc ggccgggatc ggccaggccc ggtgctgccc ttccggctcg
     1921 gccgaaccca gcagggcccg cagggccggc cgctgcagca gctcgcgcca ctgggcggcc
     1981 atcgggcgga cggagacgcc gggccggcgg gggagcccga agccgacgtt ggcccgccca
     2041 ccggccacgg ggaacaccca ggcgtagccc ggcagcagat cgggctcgaa caggatccac
     2101 agccgccggt cgggtacgcc ggtgaagtac tggcggaagg cgtgccactc gccgaggtag
     2161 ccggacggcc cggccccgag cgccttgcgc accgggctcc acatcccgtc ggcggcgatg
     2221 acgtagcggg cggcgaccgg tgcgtggccg tcgaggccga cctcgacgtg gtcggcgcgg
     2281 tcggccagcg tgccgtcgaa ggcgtggccc tcgagcacgg tgaccccggc cttgacggc
//
LOCUS       DATGJT010000627         2354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_189918, whole genome shotgun sequence.
ACCESSION   DATGJT010000627 DATGJT010000000
VERSION     DATGJT010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189918"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..932)
                     /locus_tag="VKX24_10825"
     CDS             complement(<1..932)
                     /locus_tag="VKX24_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013285309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HLJ09024.1"
                     /translation="MKALTWHGIEDVRIDTVPDPKIQEPTDAIVRITSTAICGSDLHL
                     YRVLGMFIDVGDILGHEPMGIVEEVGPGVTNLKPGDRVVVPFNISCGHCFMCDQQLYS
                     QCETTQVRSEGKGAALFGYTKLYGQVPGGQAEYLRVPHADFGPVKVPDGPPDDRFLYL
                     SDIIPTAWQAVAYADVPKGGSLAVFGLGPVGQFCTRVARPLGAERVFGIDLVPERLEM
                     AARHGVETIDARRGGVVDQLRERTGGRGPDAVVDAVGMEAHGSPVAAMMQRAAGMLPD
                     PVAKKVTEKMGVDRLSVLYQAIDAVRRGGTVSISG"
     gene            complement(1138..1392)
                     /locus_tag="VKX24_10830"
     CDS             complement(1138..1392)
                     /locus_tag="VKX24_10830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09025.1"
                     /translation="MADKELTDTDMNPGTQHGVGESMTRRGEDVIKEEGPDSGRKPNQ
                     GTSGADRPHGTNTARSSTGVDPQENIMDEMPNMQSGDQGG"
     gene            complement(1425..1994)
                     /locus_tag="VKX24_10835"
     CDS             complement(1425..1994)
                     /locus_tag="VKX24_10835"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HLJ09026.1"
                     /translation="MDALELLIADHNRVRGLFTRFQAAEGSDDGEAARLAATIFEELR
                     VHTRIEEELFYPTVSECNEEIHDLVTEGIEEHHVVDELMAEAQALDPSDEKWAAKLKV
                     LIENVEHHAEEEEQELFPLVRKALDSDARAELGRRLEARKAEMGAPTAADKEHLSTEE
                     LNRLAREQEIPGRSSMKREELLATVAPQS"
     gene            complement(2133..>2354)
                     /locus_tag="VKX24_10840"
     CDS             complement(2133..>2354)
                     /locus_tag="VKX24_10840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HLJ09027.1"
                     /translation="AERRKVADFVIIEAPAALNASDCLALAPLVDGILVVADARHTER
                     DDVEQLRIQFEQVGGQVVGAVLSNAAAGV"
BASE COUNT          295 a          846 c          811 g          402 t
ORIGIN      
        1 ccgctgatcg acacggtccc accgcggcgg acggcgtcga tcgcctggta gagcaccgaa
       61 aggcggtcga cgcccatctt ctccgtcacc ttcttggcca ccgggtcggg cagcattccg
      121 gccgcccgct gcatcatcgc cgccaccggg gacccgtggg cctccatacc gacggcgtcg
      181 accacggcgt cggggccgcg gccgccggtc cgttcccgca gctggtccac gaccccgccc
      241 ctgcgggcgt cgatcgtctc cacaccgtgg cgggcggcca tctcgagccg ctcgggcacg
      301 aggtcgatgc cgaagacccg ctcggcgccg aggggccggg ccacccgggt gcagaactgt
      361 cccaccggcc cgagcccgaa caccgccagg ctgcccccct tggggacgtc ggcgtaggcc
      421 accgcctgcc aggcggtcgg gatgatgtcg gacaggtaga ggaaccggtc gtcgggcggc
      481 ccgtccggca ccttcaccgg cccgaagtcg gcgtggggca cccggaggta ctcggcctgg
      541 ccgccgggca cctggccgta gagcttggtg tagccgaaca gcgccgcgcc cttgccctcc
      601 gagcggacct gggtggtctc gcactgggag tacagctgct ggtcgcacat gaagcagtgg
      661 ccgcaggaga tgttgaacgg gacgacgacc cggtctccgg gcttgaggtt ggtgacgccc
      721 gggccgacct cctcgacgat gcccatcggt tcgtggccca ggatgtcgcc cacgtcgatg
      781 aacatgccga gcacccggta cagatggagg tccgagccgc agatggccgt cgacgtgatc
      841 cgcacgatgg cgtcggtcgg ctcctggatc ttcgggtcgg gcaccgtgtc gatgcggacg
      901 tcctcgatgc cgtgccaggt caacgccttc atcgatgcct cctcgtcctc ggcggtgggt
      961 tcgtccgaag ccattacccg ccgggacggc gggagatgcc accgaatcag ccggccgccg
     1021 ggatcgggac ggcgccgctc gcgccggtcg gctgacgacc tcccggcgcg ccgcggcggt
     1081 ggccaggtcg cgcttccggc caccgccgct ggaggggtgt tggtgctgga cgggctctca
     1141 gccgccctga tcgccggact gcatgttcgg catctcgtcc atgatgtttt cctgggggtc
     1201 gacaccggtc gagctgcggg cagtgttggt gccgtgcggc cggtcggcgc cgctcgtgcc
     1261 ctggttgggc ttgcgcccgg agtcggggcc ctcctctttg atcacgtctt ccccgcgccg
     1321 cgtcatgctc tcgccgacgc catgctgggt acccgggttc atgtcggtat cggtcagttc
     1381 cttgtcggcc atggtcatac tccgttccgt gtgcttgggg gccgtcagct ctgaggggcg
     1441 acggtggcca gcagctcctc ccgcttcatg gaggaacgtc cggggatctc ctgctcccgg
     1501 gccagccggt tcagctcctc ggtgctcagg tgttccttgt cggcggcggt gggcgcgccc
     1561 atctccgcct tcctggcctc gagcctccgg cccagttcgg ctcgggcgtc gctgtcgaga
     1621 gccttgcgca ccaaggggaa gagctcctgc tcctcctcct cggcgtggtg ttcgacgttc
     1681 tcgatgagga ccttcagctt ggccgcccac ttctcgtcgg acgggtccag cgcctgggcc
     1741 tcggccatga gctcgtcgac gacgtggtgc tcctcgatcc cctcggtgac gaggtcgtgg
     1801 atctcctcgt tgcactccga gaccgtcggg tagaacagct cctcctcgat ccgggtgtgg
     1861 acccggagct cctcgaagat cgtggccgcc agccgggccg cctccccgtc gtccgaacct
     1921 tccgccgcct ggaagcgggt gaacagtccc cgcactcggt tgtggtcggc gatcaacagc
     1981 tccagcgcgt ccatccgggg ttccccctct gcgaccgtga catggaatgc tgccgcggta
     2041 cccgcccgag cggggggaga aacccgaccg gcccggctca gtcgaggccg gtgaccccct
     2101 tcggcgcctg ccggtccatg aatccgaacc cgtcagacgc cggcggcggc gttgctcagc
     2161 acggcgccga ccacctggcc gccgacctgc tcgaactgga tccggagctg ctcgacgtcg
     2221 tcacgctcgg tgtgccgggc gtcggccacc acgaggatgc cgtcgaccag cggggccagt
     2281 gccaggcaat ccgaggcgtt gagggcggcc ggggcttcga tgatcacgaa gtcggccacc
     2341 ttgcgccgct cggc
//
LOCUS       DATGJT010000628         3490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_495472, whole genome shotgun sequence.
ACCESSION   DATGJT010000628 DATGJT010000000
VERSION     DATGJT010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3490
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495472"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..738)
                     /locus_tag="VKX24_10845"
     CDS             complement(<1..738)
                     /locus_tag="VKX24_10845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018636697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HLJ09028.1"
                     /translation="MGDLKEGLADALEGARQRSLGLLDPLSEADQLAQHSPLMSPLVW
                     DLAHVGHYEELWLLRAVARTRPIDPAHDDIYDAFKHVRKERARLPILGPAEARRHIAM
                     VRGRVLDVLDKVELDPAVPLLSEGFVYGMVAQHEHQHDETMLATLQLRASPEPYPYGG
                     GPAAVPPAGAGTEILVPGGPFVMGADGDPFAYDNERPAHVVDLAPFRIDTFPVTNREY
                     LAFVEAGGYDERRFWSEAGWAHRRAEEL"
     gene            complement(792..1709)
                     /gene="ligD"
                     /locus_tag="VKX24_10850"
     CDS             complement(792..1709)
                     /gene="ligD"
                     /locus_tag="VKX24_10850"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007289853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HLJ09029.1"
                     /translation="MTFVEIEGRQLKLSNLEKVLYPEVRFTKGQVIDYYMRIAPALLR
                     QIRGRPLTLKRYPNGVDAGYFYEKQCPGHRPPWVQVAPVWSGQNERTINFCLVEDLPT
                     LIWVANLASLELHTALHRAAGSKGTPDERWTPDMVVFDLDPGEPAAFPDCAQVALWLR
                     ESLDGLGLACFPKTSGSKGLQVYAPLNTPVTYDETKGFARALAQVAERAHPKLVVSNM
                     AKELRRGKVLIDWSQNDEHKTTVSVYSLRARPRPTVSAPLHWSEVEAAAAGGAVPAVE
                     AGEAVQRLEADGDLFTPLLEMEQRLPVFG"
     gene            complement(1717..2523)
                     /locus_tag="VKX24_10855"
     CDS             complement(1717..2523)
                     /locus_tag="VKX24_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007289852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HLJ09030.1"
                     /translation="MPRAIWSGAISFGLVNVPVKLFSAVSPKDVRFNQLEEGTGARIR
                     QKRVSAETGEEVPYEKIVKGYEISPDRYVIIAPEELEALDPKATRAIDIEDFVDLDQI
                     DPVHYERPYYLVPEKGAAKAYKLLLDAMKDSNKVAIARMVLRTKQYLAAIRPMGDVLC
                     LETLLFADEVVPPESLDGLPGPDSEVSERELKMARQLIESLSTDFEPEKYHDEYRERV
                     LALIEQKAEGAEIVAQPAAEEPTKVVDLMAALEASLAAAKEKRAAEAGSE"
     gene            complement(2529..>3490)
                     /gene="ligD"
                     /locus_tag="VKX24_10860"
     CDS             complement(2529..>3490)
                     /gene="ligD"
                     /locus_tag="VKX24_10860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020573865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HLJ09031.1"
                     /translation="WRPMLATAAAAVPKDEANWSFEVKWDGIRALATVSGGRIKLEAR
                     SGHDVSHRYPELSGLGRALGATEAILDGEIVALDPATGRPSFERLQRRMHVESESAIR
                     RLRQDLTVTYVLFDVLWLDGRPTTGLPYSQRRRLLEELGLNGPAWHTPAAHPGEGAAL
                     LDATRAAGLEGVVAKRLDSLYEPGVRTRNWLKVKNHLAQDFVVGGWLPGEGSRGRLGA
                     LLLGVYQDDGRLCFAGRVGTGFTDAELTRLLRLLDPIRRDTSPFDPPPPKPVAREATW
                     VEPELVVEVEFTEWTGVGILRHPSYKGQRDDKDPREVVREVGN"
BASE COUNT          469 a         1243 c         1243 g          535 t
ORIGIN      
        1 gagctcctcg gcgcggcggt gggcccaacc ggcctccgac cagaagcgcc gctcgtcgta
       61 gccgccggcc tcgacgaagg ccaggtactc ccggttggtg accgggaagg tgtcgatgcg
      121 gaagggggcg agatcgacga cgtgggccgg ccgctcgttg tcgtaggcga agggatcgcc
      181 gtcggcgccc atgacgaacg gcccgcccgg gacgaggatc tcggtgccgg cgcccgccgg
      241 cgggaccgcc gccggcccgc cgccgtacgg gtagggctcc ggcgacgccc ggagctgcag
      301 cgtggccagc atcgtctcgt cgtgctggtg ctcgtgctgg gccaccatgc cgtagacgaa
      361 accctcggag agcagcggga cggccgggtc gagctccacc ttgtcgagga cgtcgaggac
      421 gcggccccgg accatggcga tgtggcggcg ggcctcggcc gggccgagga tcggtagccg
      481 ggcccgctcc ttccggacat gcttgaaggc gtcgtagatg tcgtcgtggg ccgggtcgat
      541 cggccgggtc cgggccaccg cccgcagcag ccacagctcc tcgtagtggc cgacgtgggc
      601 caggtcccac accagcgggg acatcagcgg ggagtgctgg gccagctggt ccgcctccga
      661 gagggggtcg agcagcccga gggaccgctg ccgggcgccc tcgagcgcgt cggccaagcc
      721 ctccttgaga tcgcccatga ccgcccttct tacccggtcg ccctgcgctg gaatcgccta
      781 ccaggtgaag ttcaaccgaa caccgggagc cgttgttcca tctccagcag cggcgtgaag
      841 aggtcgccgt ccgcctccag ccgctgcacg gcctccccgg cctcgacggc cgggaccgcc
      901 ccgccggccg ccgccgcctc cacctcgctc cagtgcagcg gcgccgagac cgtcggccgg
      961 ggccgggccc gcagcgagta gaccgacacc gtcgtcttgt gctcgtcgtt ctggctccag
     1021 tcgatgagga ccttgccccg ccgcagttcc ttggccatgt tcgacaccac gagcttcggg
     1081 tgggcccgct cggcgacctg ggccagcgcc cgggcgaagc ccttcgtctc gtcgtaggtc
     1141 accggcgtgt tgagcggcgc atagacctgc agccccttgc tccccgacgt cttcgggaag
     1201 caggccaggc cgaggccgtc gagcgactcc cgcagccaca gggcgacctg ggcgcagtcc
     1261 gggaaggcgg ccggctcgcc ggggtcgagg tcgaagacga ccatgtccgg cgtccaccgc
     1321 tcgtcgggcg tgcccttcga gcccgccgcc cggtgcaggg cggtgtgcag ctccagcgag
     1381 gcgaggttgg ccacccagat cagcgtcggc aggtcctcca cgaggcagaa gttgatcgtc
     1441 cgctcgttct ggccgctcca caccggcgcc acctggaccc agggcggccg gtggcccggg
     1501 cactgcttct cgtagaagta gccggcgtcg acgccgttgg gatagcgctt gagcgtcagc
     1561 ggccggcccc ggatctggcg gagcagggcc ggggcgatcc gcatgtagta gtcgatgacc
     1621 tggcccttgg tgaaccgcac ctcggggtag agcaccttct cgaggttcga cagcttgagc
     1681 tgccgtccct cgatctccac gaaggtcacc gagcgcttac tccgagccgg cttcggcggc
     1741 ccgcttctcc ttggccgcgg ccagcgaggc ctcgagggcg gccatcaggt cgacgacctt
     1801 cgtcggctcc tcggcggccg gctgagccac gatctccgcg ccctcggcct tctgctcgat
     1861 gagcgccagc acccgctccc ggtactcgtc gtggtacttc tcgggctcga agtcggtcga
     1921 cagcgactcg atgagctggc gggccatctt gagctcccgc tccgacacct cgctgtcggg
     1981 gccggggagc ccgtcgagcg attccggcgg gacgacctcg tcggcgaaga gcagcgtttc
     2041 gaggcacagc acgtcgccca tcgggcggat ggcggccagg tattgcttcg tccgcagcac
     2101 catgcgggcg atggccacct tgttcgagtc cttcatggcg tcgagcagca gcttgtaggc
     2161 cttggcggcc cccttctccg gcaccaggta gtagggccgc tcgtagtgga cggggtcgat
     2221 ctggtcgagg tcgacgaagt cctcgatgtc gatcgcccgg gtggccttgg gatcgagcgc
     2281 ctcgagctcc tcgggggcga tgatcacgta gcggtcgggc gagatctcgt accccttcac
     2341 gatcttctcg tagggcacct cctcgccggt ctcggccgag acccgcttct ggcggatccg
     2401 ggcgcccgtc ccctcttcga gctggttgaa ccgcacgtct ttcggcgaca cggcgctgaa
     2461 cagcttcacc ggcacgttga ccagcccgaa gctgatcgcc ccgctccaaa tcgctctcgg
     2521 catgggtttt agtttcccac ctctctcacg acctccctcg ggtccttgtc gtcgcgctgc
     2581 cccttgtagg acggatggcg gaggatgccg acgcccgtcc actcggtgaa ctccacctcg
     2641 acgacgagct cgggctccac ccaggtcgcc tcccgggcca ccggcttcgg gggcggaggg
     2701 tcgaagggcg acgtgtcgcg ccggatcggg tcgaggagcc gcagcagccg ggtgagctcg
     2761 gcgtcggtga agccggtgcc gacccggccg gcgaagcaca gccgtccatc gtcctggtag
     2821 acgccgagca gcagcgctcc caatcggccc cgggagccct cgccggggag ccagccgccg
     2881 acgacgaagt cctgggcgag gtggttcttg accttgagcc agttccgggt ccgcacgccg
     2941 ggctcgtaga gggagtcgag ccgcttggcg accacgccct ccaggccggc cgcccgggtg
     3001 gcgtcgagga gcgccgcgcc ctccccgggg tgggcggccg gcgtgtgcca ggccggaccg
     3061 ttgagcccga gctcctccag gagccggcgg cgctgcgagt agggcaggcc ggtggtcggg
     3121 cggccgtcga gccagaggac gtcgaagagg acataggtga cggttaagtc ctggcggagg
     3181 cggcggatgg cgctctccga ctccacgtgc atgcgacgct ggagccgctc gaacgatggt
     3241 cgcccggtgg cgggatcgag agcgacgatc tcgccgtcga ggatcgcctc ggtggcgccg
     3301 agcgcccggc ccaggccgga gagctccggg taccggtggc tgacgtcgtg gccgctccgg
     3361 gcctccagct tgatccgccc gccggagacg gtcgccagcg cccggatccc gtcccacttc
     3421 acctcgaacg accagttcgc ctcgtccttc gggacggcgg cggcggccgt ggccagcatc
     3481 gggcgccacc
//
LOCUS       DATGJT010000629         2928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_293962, whole genome shotgun sequence.
ACCESSION   DATGJT010000629 DATGJT010000000
VERSION     DATGJT010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2928
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293962"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2456
                     /locus_tag="VKX24_10865"
     CDS             <1..2456
                     /locus_tag="VKX24_10865"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HLJ09032.1"
                     /translation="TQASQRMAAAGSMQTPVVSDITAHGGTDVTRLVAPDAVAARLSA
                     AEVSRLRSNPSVAEIVPDVPVPVAGADSAPASTPVEPKAKVAESRTLTNCPFNPAGTS
                     KPLVEPEALSDIHAYSANPNTPDMANSVATGAGVIVGNMGANQLAGNPNFTRADGSHV
                     VIDAPDYTADHSNDEDYGDVSSIAAQGTVVYQYSGALPFSDVPPGCTFVIRGDAPDAS
                     VVDLSQVDTPVLMLSQVLAGIDNAAATVHADVISESFGSSSLPTSTSGQLLAKANEAA
                     VEAGVTVVESSGDSGDSGTMIAAADDPLVIATGAVDNFRLVALAHDYNSYVSNNMAAL
                     SSGGTAPTNKVVDLVAPGYFGGEAACADGSGGCPPNYPTESMRGTSESAPLTAGAAAD
                     VIQAYRSTHGGASPTPAMVKQILTSTATDIDAPADQQGAGLLNVYAAVKAAQQMPGTT
                     DASGPGSAPGLVASPSQLDLTGNGGSVSNQTVSLYNTDNRPTTVFASYRRIGPEFQIG
                     RTVTENVSAPPASQPIPPEGAKAANTISFVVPPQLDRLDADMIWPDSTNSNVICFALF
                     DPRGRLEQLSYDDGPPAANGRPGAVPNIQHATVTNPEPGRWTAKILWSGTDVDLALAP
                     AVPGTYTGPMSFKVSGQNYISSPASTPVTIGARSSASVPLHIAMPVSPGDSAESVQFT
                     GRDGAATSLPVTRRTLIPANGGSFQTLITSTVGRMYGQVNTYQVNVPAGRSELDATFH
                     TADASADNTYTFYLVDPSGTVVARATSPQTVNGTAVGTAELDTPDPVAGTWTIDVELN
                     LTVSGKEFTQTVYGNLQDP"
     gene            complement(2588..>2928)
                     /locus_tag="VKX24_10870"
     CDS             complement(2588..>2928)
                     /locus_tag="VKX24_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09033.1"
                     /translation="GLPRWNRTPGGQEVPVYVRLDLRPRFPGLTVVHEARPSPDARYF
                     GPYLGGLKVRLAVSAVHRVWPVAYAADGLRGALRDLAGVRGVDPGHRAELTGAITALL
                     NREPAGGHAG"
BASE COUNT          480 a         1098 c          990 g          360 t
ORIGIN      
        1 ggacgcaggc cagccagcgc atggccgcgg cggggtccat gcagacgccg gtcgtgtccg
       61 acatcaccgc ccacggcggc accgacgtga cccggctggt ggcccccgac gccgtggccg
      121 cccgcctgtc ggcggccgag gtcagccggc tgcgcagcaa tccgtcggtg gccgagatcg
      181 tgcccgacgt cccggtgccg gtggccgggg cggactcggc accggcatcg accccggtcg
      241 agccgaaggc caaggtggcc gagtcccgga cgctcaccaa ctgcccgttc aacccggcgg
      301 gtacctccaa gccgctggtg gagcctgagg cgctgtcgga catccacgcc tatagcgcca
      361 acccgaacac cccggacatg gcgaactcgg tcgccacggg cgccggcgtg atcgtcggga
      421 acatgggcgc caaccagctc gccggcaacc cgaacttcac cagggccgac ggctcgcacg
      481 tggtcatcga cgcgcccgac tacaccgccg accacagcaa cgacgaggac tacggcgacg
      541 tgtcctcgat cgcggcgcag ggcaccgtgg tgtaccagta ctccggggcc ctgccgttct
      601 ccgacgtgcc ccccgggtgc accttcgtga tcaggggtga cgcccccgac gcgtcggtcg
      661 tcgacctgtc tcaggtcgac acgccggtgc tgatgctgtc gcaggtcctg gccggaatcg
      721 acaacgcggc ggccacggtg cacgccgacg tgatctccga gtctttcggg agttcctcgc
      781 tgccgaccag cacctccggt cagctcctgg ccaaggccaa cgaggccgcg gtggaggcgg
      841 gcgtgaccgt ggtggaatcc tctggcgaca gcggtgactc cggcaccatg atcgcggccg
      901 ccgacgaccc gctggtgatc gcgacgggag cggtggacaa cttccgcctg gtggccctgg
      961 cccacgacta caacagctac gtcagcaaca acatggcggc gctgtcgtcg ggcggcacgg
     1021 cgccgaccaa caaggtcgtc gacctggtcg cgccgggcta cttcggcggc gaggcggcct
     1081 gtgccgacgg cagcggcggc tgcccgccga actacccgac cgagtcgatg cggggcacca
     1141 gcgaatcggc gccgctgacg gccggcgcgg ccgcggacgt gatccaggcg taccgctcca
     1201 cccacggcgg ggccagcccc acgccggcga tggttaagca gatcctgacc agcacggcga
     1261 ccgacatcga cgcgcccgcc gaccagcagg gcgccggcct gctcaacgtc tacgccgccg
     1321 tcaaggccgc gcagcagatg ccgggcacga cggacgccag cggccccggc agcgcaccgg
     1381 gcctggtcgc ctcgccgtcg cagctcgacc tgaccggcaa cggtggctcg gtcagcaacc
     1441 agaccgtcag cctgtacaac accgacaaca ggccgaccac ggtgttcgcc agctaccggc
     1501 ggatcggtcc cgagttccag atcggccgga cggtcacgga gaacgtgagt gcgccgccgg
     1561 ccagccagcc gataccgccg gagggtgcga aggcagcgaa cacgatcagc ttcgtcgtac
     1621 cgccccagct ggaccggctc gacgccgaca tgatctggcc cgactccacg aacagcaacg
     1681 tcatctgctt cgcgctgttc gatccgaggg gccggctcga acagctctcc tacgacgacg
     1741 ggccgccggc cgccaacggc aggcccggcg cggtgcccaa catccagcac gccacggtca
     1801 ccaatccgga gccgggacgg tggaccgcga agatcttgtg gtcgggcacc gacgttgacc
     1861 ttgccctcgc ccccgccgtg cccggcacct ataccgggcc gatgtcgttc aaggtctccg
     1921 gacagaacta catcagctcg ccggcctcga ccccggtgac gatcggggcg cgctcgagcg
     1981 cgtcggtccc gctgcacatc gcgatgccgg tcagcccggg tgacagcgcg gaatcggtcc
     2041 agttcaccgg gcgagacggc gcggcgacgt cgctaccggt gacgcgccgc accctgatcc
     2101 cggcgaacgg cggctcgttc cagactctga tcaccagcac cgtcggccgc atgtacgggc
     2161 aggtcaacac gtaccaggtc aacgtgccgg ccgggcgcag cgagctcgac gccacgttcc
     2221 acaccgccga cgccagcgcc gacaacacct acacgttcta tctggtcgat cccagtggaa
     2281 cggtcgtcgc cagggccacg tcgccgcaga cggtcaacgg cacggcggtg ggcacggccg
     2341 agctcgacac acccgatccc gtcgccggaa cgtggaccat cgacgtcgag ctcaacctga
     2401 ccgtgagcgg aaaggagttc acccagaccg tctacgggaa cctgcaggac ccgtgatctg
     2461 actcgtggcg ggggcggtcg ccgaaccggc cgtcctcgcc acgacccgtc ccgccacggc
     2521 caggcgcggg cctggctagc cgagccgggc cgcgagctcg gcgttgcgcc gggcgaacgg
     2581 ccgccattca gccggcgtgc ccgccagctg gttcccggtt cagcagcgcg gtgatcgcgc
     2641 cggtcagttc cgcccggtga ccgggatcga ccccgcgcac gccggccagg tcacgcagcg
     2701 cgccccgcaa gccatcggcg gcataggcta ccggccacac ccggtgcacg gcggagacgg
     2761 ccagccgcac cttgagaccg ccgaggtagg ggccgaagta acgggcgtcg ggcgagggac
     2821 gagcttcgtg caccaccgtc aggccgggaa agcgcggccg caggtccagc cggacgtaga
     2881 ccggcacctc ttggccgccc ggggtgcgat tccaccgcgg cagcccct
//
LOCUS       DATGJT010000630         2291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_603633, whole genome shotgun sequence.
ACCESSION   DATGJT010000630 DATGJT010000000
VERSION     DATGJT010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603633"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="VKX24_10875"
     CDS             <1..386
                     /locus_tag="VKX24_10875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003150470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ09034.1"
                     /translation="GMAPERVREIQRISQEPVSLEAPVGDEDDSLLGDFVEDPGAIAP
                     ADAAARALLTEAVEEALEQLSERERRVVRLRFGLDDGQLHTLEEVGKEFGVTRERIRQ
                     IESKTLAKLRHPTRSQRLRDYLDEG"
     gene            complement(410..838)
                     /locus_tag="VKX24_10880"
     CDS             complement(410..838)
                     /locus_tag="VKX24_10880"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ09035.1"
                     /translation="MEIRYSLRLPRDVVTVPLVRTICRDAMHRLGVTPDCQGDVALAL
                     TEACANVVQHAEGVSEYEVNIEFCGGLCHIRVVDKGAGIDITDSSRTETFLDRDSGRG
                     VVLMRLLVDRIAFESRPEDGTIVHLQKNLELEEGALLAAL"
     gene            complement(893..2152)
                     /locus_tag="VKX24_10885"
     CDS             complement(893..2152)
                     /locus_tag="VKX24_10885"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLJ09036.1"
                     /translation="MLSTVAVALGALLVLGLPVVFFVDRLARAEATAIVRRQAEGIAT
                     GLANEIAAGRDVTAEVLAASVPPGDHLELHTVNGTVVSAGEVRARGVVAVDVAAIGGI
                     TLRLETSDEFVRDRVRQAWLALGGLGALGLAVAAGLAGVQARRLAGPLDDLARAAERL
                     GAGDFSATAPRSGMEEVDTIAAALDSSAARIATLVQAEREFSANASHQLRSALTSLRL
                     RLESLAAADDPAVAAEAARALEQAERLSDTVADLLRLARTGRADDAQTFDLAGLASAH
                     LRDLGPRLEAERRAAELVAPRPVRVRAAAGAVGQALDVLLDNALQHGRGPIRVVVESA
                     GDHGHLTVEDQGPGIDPGSGTRLFERRVAGEGGHGIGLALARTLVQADGGRLDLVRAS
                     PASFRITLPLADASSQTAPGSADSQAG"
     gene            complement(2173..>2291)
                     /locus_tag="VKX24_10890"
     CDS             complement(2173..>2291)
                     /locus_tag="VKX24_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019629095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ09037.1"
                     /translation="TKTLDMHISWLRRKLGDDPAAPKLITTLRGVGFRFETG"
BASE COUNT          305 a          827 c          885 g          274 t
ORIGIN      
        1 tcggcatggc gccggagcgg gtgcgggaga tccagcggat ctcccaggag cccgtgtccc
       61 tggaggcccc cgtcggcgac gaggacgaca gcctcctcgg cgacttcgtc gaggatccgg
      121 gcgccatcgc ccccgccgac gccgccgccc gagcgctgct caccgaggcg gtggaagagg
      181 cgctggagca gctgtcggag cgggagcggc gggtggtgcg cctccggttc gggctcgacg
      241 acggccagct ccacacgctg gaggaggtcg gcaaggagtt cggggtcacc cgggagcgga
      301 tccgccagat cgagtcgaag acgctggcca aactgcgcca cccgacccgg tcacagcggc
      361 tgcgggacta tctcgacgag ggatagcgcc agcccggcgg gagcgccggc tacagcgcag
      421 ccagcagggc gccctcttcc agctccaggt tcttctggag gtggacgatg gtgccgtcct
      481 ccgggcggga ctcgaaggcg atccggtcga cgaggagccg catgagcacg acgccccggc
      541 cgctgtcccg gtcgaggaac gtctcggtcc ggctggagtc cgtgatgtcg ataccggcgc
      601 ccttgtcgac cacccggata tggcagagcc cgccgcaaaa ctcgatgttg acctcgtact
      661 cgctcacgcc ctcggcgtgc tggacgacgt tggcgcaggc ctcggtgagg gcgagggcga
      721 cgtcgccctg gcagtccggg gtgacgccga gccggtgcat ggcgtcccgg cagatcgtgc
      781 gcacgagggg cacggtgacg acgtcccggg gaagacgcaa cgagtaccgg atctccacct
      841 tcacaccact ccctgagctg cctctggtga gcttccgttc gcttcaggac cgttacccgg
      901 cttgggaatc ggccgaacct ggggcggtct gggaggaggc gtcggccagg gggagtgtga
      961 tgcggaagct ggccgggctg gcccggacga ggtcgagccg gccgccgtcg gcctgcacca
     1021 gcgtgcgggc cagcgccagg ccgatgccgt gcccgccctc gccggccacc cggcgctcga
     1081 agagccgggt gccggacccc gggtcgatgc ccggtccctg gtcctcgacg gtgagatggc
     1141 cgtggtcgcc ggccgactcc accaccacgc ggatcgggcc ccggccgtgc tggagggcgt
     1201 tgtcgagcag gacgtcgagc gcctgcccga cggccccggc ggcggcccgc acccggaccg
     1261 gccggggagc gaccagctcc gccgcccgcc gttccgcctc caagcggggg ccgagatccc
     1321 gcaggtgggc ggacgccagc ccggccaggt cgaacgtctg ggcgtcgtcg gcccggccgg
     1381 tgcgggccag ccgcaggagg tcggcgacgg tgtcggagag ccgctccgcc tgctccagcg
     1441 cccgggcggc ctcggcggcc accgccgggt cgtcggccgc cgccaggctc tccagccgca
     1501 gccggaggct ggtcagcgcg ctgcggagct ggtgggaggc gttggccgag aactcccgct
     1561 ccgcctggac cagcgtggcg atgcgggcgg cgctggagtc gagggcggcg gcgatggtgt
     1621 cgacctcctc catgccgctg cggggggcgg tggccgagaa gtcaccggcg ccgaggcgct
     1681 cggccgcccg ggcgaggtcg tcgagcggcc cggccagccg ccgggcctgg acgccggcca
     1741 gcccggcggc gacggcgagg cccagggcgc cgaggccccc gagcgccagc caggcctgcc
     1801 ggacccggtc ccggacgaac tcgtccgacg tctccagccg cagggtgatc ccgccgatgg
     1861 cagcgacgtc gacggccacc accccccggg cccggacctc cccggcgctc accacggtgc
     1921 cgttcacggt gtggagctcc aggtggtccc cgggcgggac cgacgccgcc agcacctcgg
     1981 ccgtgacgtc gcggccggcg gcgatctcgt tggccagccc ggtggcgatg ccctcggcct
     2041 gacggcggac gatggcggtg gcctcggccc gggccaggcg gtcgacgaag aacaccaccg
     2101 ggaggccgag cacgagcagg gcgcccagcg ccacggcgac cgtcgagagc accagccgct
     2161 ggcgcaaggc cgctagcccg tctcgaaccg gaagcccacg ccccgcaggg tggtgatcag
     2221 cttcggggcg gcggggtcgt cgccgagctt ccggcggagc caggagatgt gcatgtcgag
     2281 ggtcttggtc g
//
LOCUS       DATGJT010000631         3671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_294575, whole genome shotgun sequence.
ACCESSION   DATGJT010000631 DATGJT010000000
VERSION     DATGJT010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3671
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294575"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..680
                     /locus_tag="VKX24_10895"
     CDS             <1..680
                     /locus_tag="VKX24_10895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09038.1"
                     /translation="LEPLGVSTARCIGFRHDDPTDADWLVLEFLEGATPLLECRRSRA
                     LDRAAEWLGTFHGATEGLWPDLLLSGIPFRDAEWYQGWMDRTAGWAGALHVRYPWLAT
                     ACRRPDLYEPLLTAAHSVVHGEFTPANVLVRDRDVFPVDWESAALAPGELDLAFFTLG
                     WPGRLRRRVETAYARRRWPAGPPPAFQETLRAARIHACFRVLGDSPAGPSAGDARTLF
                     RILRSLV"
     gene            741..1814
                     /locus_tag="VKX24_10900"
     CDS             741..1814
                     /locus_tag="VKX24_10900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09039.1"
                     /translation="MRRILLCAAAAVVWLGVAAAPASAHSVSGVSATNFHTHLTSVTP
                     EVPGLDVKVIEAGSRLQLENHTGQEVLVLGYKDEPYLRVGPEGVFQNRLSPATYLNQT
                     RKGNQPPPAAENAPVGATDWQKVSSEPVARWHDHRIHWMLATNPPMVQRAPGSRHIVI
                     PEWTVKMKQGDRPITVKGNLTWEPGSTPLPWYALALVLLLLVLAIGRSAPWAPGLAAV
                     TGVVVAVDIFHNVGLGLANAGGLGYRLGKAISQSPFSLLGWAAGILGIVWLLRRRTDG
                     LSAAGLAGFLIALLGGVSDATALARSEVPFGFGPTLARLAVTVSIGLGLGLAVATALR
                     LAGIGIPAPTKEAPRKRQPAAVS"
     gene            1978..2601
                     /locus_tag="VKX24_10905"
     CDS             1978..2601
                     /locus_tag="VKX24_10905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09040.1"
                     /translation="MYRLGISARLDGEDAGIDDAGLAWHLAHCAGCRRYQSEAIHLSR
                     ATRVAAAEPTPDLGPTILSAIARERAAATRRFDPEALRGGLIALAVVQMLLALPVLLL
                     GRDAGAPVHIAREVGSFDFALGVGFLFVGWRPARAYGMLPLVAALVACLGISTAVDLV
                     RGTATLLGESAHLLDLFGLASVWELAKIDGSSRPHGQSGRGGLTQAG"
     gene            complement(2598..>3671)
                     /locus_tag="VKX24_10910"
     CDS             complement(2598..>3671)
                     /locus_tag="VKX24_10910"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ09041.1"
                     /translation="FRQARVTGVDFDARQLTVAGGERIPYDTLVLATGSANAYFGNPE
                     LAERTIGMKHLDEAMRLRNHVLSCLERAAQTADPVERAEWLTFVIVGGGPTGVEYAGA
                     LAELLDMVLGRDFPELARGSGRVVLVEGTGRLLGPFHPKLGAYAADTLRSRGVEVRLS
                     TLVREATASAAVLAPAGGGDTVTIGARTIVWSAGVGPEDPLAPEAVPRSRSKRLQVDD
                     RLRLQPGVYAIGDVASVGSGGGELPMLSPPAMQEGRYVARAIRAGSEPPAPFRYLDKG
                     TMATIGRRAAVAQVGPVRLRGFLGWITWLVVHLYYLIGFRNRALVLASWGWDYLRRDR
                     PIRLIVRSRFDPVVASLMPDDPG"
BASE COUNT          455 a         1415 c         1321 g          480 t
ORIGIN      
        1 tcctggagcc gctcggcgtg agcaccgccc gctgcatcgg cttccggcac gacgacccga
       61 ccgacgccga ctggctggtc ctcgagttcc tcgagggagc cacgccgctg ctcgagtgcc
      121 ggcgcagccg ggcgctcgac cgggccgccg aatggctggg cacgttccac ggcgccaccg
      181 agggactgtg gcccgacctg cttctgtcgg ggatcccgtt ccgcgacgcc gagtggtacc
      241 agggatggat ggaccgcacg gccggctggg ccggcgccct gcatgtccgc tacccctggc
      301 tggccactgc ctgccggcgg cccgacctct acgagccgct gctcaccgcc gcccactcgg
      361 tggtccacgg cgagttcacg ccggccaacg tcctggtccg ggaccgcgac gtcttccccg
      421 tcgactggga gtcggcggcc ctggcccccg gcgagctcga cctcgccttc ttcacgctgg
      481 gctggccggg ccggctgcgc cgccgggtcg agaccgccta cgcccgccgt cgttggccgg
      541 ccggcccgcc gcccgccttc caggagacgc tgcgggccgc ccggatccac gcctgcttcc
      601 gggtgctggg cgactcgccg gccggcccgt ccgccggcga cgcccgcacg ctgttccgga
      661 tcctgcgctc gctggtctga ggcgccctgc ggcggagccg atcacacgcc ccgcggcccg
      721 gggcgcgacg attgacggcc atgcgccgga tcctgctctg tgccgcggcc gccgtcgtct
      781 ggctcggcgt cgccgccgcc cccgcctccg cccacagcgt ctcgggggtg agcgccacca
      841 acttccacac ccatctgacc tcggtgaccc ccgaggtccc gggtctcgac gtcaaggtca
      901 tcgaggccgg cagccgcctc cagctcgaga accacaccgg ccaggaggtg ctcgtcctcg
      961 gctacaagga cgagccgtac ctccgggtgg ggccggaggg cgtcttccag aaccggctct
     1021 cgccggccac gtatctcaac cagacgagga agggcaacca gccgccgccg gcggccgaga
     1081 acgccccggt cggcgccacc gactggcaga aggtctcgtc ggagcccgtc gcccgctggc
     1141 acgaccaccg gatccactgg atgctggcca cgaacccgcc gatggtgcag cgggcgccgg
     1201 ggtcgcgcca catcgtgatc ccggagtgga cggtcaagat gaagcagggc gaccggccca
     1261 tcaccgtcaa gggcaacctg acctgggagc cggggtcgac gcccctgccc tggtatgccc
     1321 tggcgctggt gctgctgctc ctggtgctgg cgatcggccg gagcgccccc tgggcgccgg
     1381 ggctggcggc cgtcaccggc gtggtggtgg ccgtcgacat cttccacaac gtggggctcg
     1441 gcctggccaa cgccggcggc ctcggctacc gcctgggcaa ggcgatcagc cagagcccgt
     1501 tctcgctgct gggctgggcc gccgggatcc tggggatcgt gtggctcctg cgccgccgga
     1561 cggacgggct gtcggccgcc gggctggccg ggttcctcat cgccctgctc ggcggagtga
     1621 gcgacgccac ggccctggcg cgctccgagg tgccgttcgg cttcggcccc acgctggccc
     1681 ggctggccgt gaccgtctcg atcggcctcg gcctcggcct ggccgtggcc accgccctcc
     1741 gcctggccgg catcggcatc cccgccccca caaaggaagc accccggaaa cgacaaccgg
     1801 ccgcagtttc ctgaagggac ggcgagaagt tcaccggaca cggccggcgg cgggcgaagc
     1861 ccgccgctac ggaggagccc ggcggatgcc gggcgggagg cggcgatagc cgccccgaaa
     1921 caacgagcgg ggaactctcc gagttccccg ctcgactacc gaggtatgac ctgcgagatg
     1981 tatcgactgg ggatctccgc ccgcctcgac ggcgaggacg ccggcatcga cgacgccggc
     2041 ctcgcctggc acctggccca ctgcgccggc tgccggcgtt accagtcgga ggccatccac
     2101 ctcagccggg ccacccgggt ggcggcggcc gagccgacgc ccgacctcgg ccccacgatc
     2161 ctgtcggcca tcgcccggga gcgggcggcg gccacccggc ggttcgaccc cgaggcgctc
     2221 cggggcgggc tgatcgccct ggccgtcgtc cagatgctgc tggcgctgcc ggtgctgctg
     2281 ctggggcgcg acgccggcgc ccccgtccac atcgcccggg aggtcggctc gttcgacttc
     2341 gccctcggcg tcgggtttct cttcgtcggc tggcggccgg cccgggccta cgggatgctg
     2401 ccgctggtcg cggccctcgt ggcctgcctg gggatcagca ccgccgtcga cctggtccgg
     2461 gggacggcga cgctgctcgg ggagtcggcc cacctgctcg acctcttcgg cctggcgtcg
     2521 gtgtgggagc tggccaagat cgacgggtcg tcccggcccc acggccagag cggccgcggc
     2581 gggctgacgc aagcgggtta gccggggtcg tcgggcatca ggctggcgac caccgggtcg
     2641 aaccggctgc ggacgatgag ccggatcggc cggtcccgcc gcaggtagtc ccaaccccag
     2701 gaggccagca ccagcgcccg gttccggaag ccgatgaggt agtacaggtg gaccaccagc
     2761 caggtgatcc agcccaggaa accccgcagc cgcaccgggc cgacctgggc caccgccgcc
     2821 cgccggccga tggtggccat cgtccccttg tcgagatagc ggaacggcgc cggcggttcg
     2881 gacccggccc ggatcgcccg ggcgacgtaa cggccctcct gcatggccgg cggcgagagc
     2941 atgggcagct cgccgccccc cgagccgacc gaggcgacgt cgccgatggc gtagaccccc
     3001 ggttgcagtc gcagccggtc gtcgacctgc agccgtttcg atcggctccg gggcaccgcc
     3061 tccggggcga gaggatcctc cgggccgacg ccggcggacc acacgatcgt ccgggcgccg
     3121 atggtcacgg tgtcgccgcc tccggccggc gccaggacgg cggcggacgc cgtggcctcc
     3181 cggaccagcg tcgacaggcg gacctcgacg ccccggctcc ggagcgtgtc ggcggcgtag
     3241 gcgccgagct tgggatggaa gggcccgagg aggcgacccg tcccctccac cagcaccacc
     3301 cgccccgatc cccgggccag ctcggggaag tcccggccca ggaccatgtc gaggagctcg
     3361 gccagcgcgc cggcgtactc cacgccggtc gggccgccgc ccacgatcac gaacgtcagc
     3421 cactcggccc gctcgacggg gtcggcggtc tgcgccgccc gctcgaggca cgacaggacg
     3481 tggttgcgga gcctcatggc ctcgtcgagg tgcttcatgc cgatcgtccg ctcggccagc
     3541 tcggggttgc cgaagtaggc gttggcgctg ccggtggcca gcacgagggt gtcgtagggg
     3601 atccgctcgc cgccggccac cgtcagctgc cgggcgtcga agtcgacgcc cgtcacccgg
     3661 gcctgccgga a
//
LOCUS       DATGJT010000632         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_190603, whole genome shotgun sequence.
ACCESSION   DATGJT010000632 DATGJT010000000
VERSION     DATGJT010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190603"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..>2039
                     /locus_tag="VKX24_10915"
     CDS             174..>2039
                     /locus_tag="VKX24_10915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09042.1"
                     /translation="MSTVFSGRRTSVVAGAVAIAVIVLSALTLLTGVRSATAATNPCG
                     VLWTDASPDASDPTGSQSDALDIVAGNLSNSATALTTTLTIANLQQTLANGATANEYY
                     FVWTSGGTTYFTDVEYSPATGVQYSYGHKDATTGSFTGDGTATGSFNTGKNGTVVATV
                     PLSAVGSPAAGSLLTAIEGDTYALEGVPSNPSGVSGGSLQTVDHDGAAADYALGQTCS
                     PTPTPSGGAPSPSPSPTAPPCSKLCFSNPLVLPASGVTGSTSATCYNPCGEPSMAVSP
                     VDGTVYVSTPRTIVICCNSQASPVWKSGDDGRTWSQPIFPSAPENATTGGDTELAIDK
                     RGTVYEGELWLGSDSIYVSPDKGSTWSWSPASHDVGADREWFTYAPAEDALYGFYDGF
                     KGLMVVKAPLTTPAGSNAALFFPLERVVVPECPDLVSVGQCAVTPSSAGGTPVLDGDV
                     SPGRPSIAPNGTLYFPFPYEVAGQGVGVAYTSDGGQSYQYTFVKGAGGGTLGDTGHDF
                     PVSAVDSAGTLYISWVENKGDGFNVYLSSFKGGAWSSPLEVSKGVSATAVFPQLVAGA
                     PGQVAVSWYGTAAKGDPNTVSPSASWNVYTTQVLGADRAGSSLITSTVQTGFHSGP"
BASE COUNT          308 a          750 c          671 g          310 t
ORIGIN      
        1 gtcgccgggc acggccggga gcttactacc gcgactgcgc gccaacccgc ctcggaatcg
       61 aggccgagtg gagggatctc caccagatcg gcggctttac tccagttgcg ctatcaccat
      121 atgctccgat cggtcggtcg ataaccgaca gcgcggacta aggagtggga attttgagca
      181 cagtcttcag cggacgccgc acgtccgtgg tggccggcgc cgtggccatc gccgtcatcg
      241 tcctgtcggc cctcacgctg ctaaccggcg ttcgcagcgc caccgcggcc accaacccgt
      301 gcggcgtgct gtggacggat gcctcgcctg acgccagcga tccgacgggc agccagtccg
      361 acgcgctcga catagtcgcc ggcaacctgt cgaacagcgc cacggcgctg acgacgacgc
      421 tcacgatcgc caacctgcag cagactctcg cgaacggggc caccgccaac gagtactact
      481 tcgtatggac ctccggcggc accacgtact tcacggacgt cgagtactcg ccggcgaccg
      541 gcgtccagta ctcctacggc cacaaggacg cgacgaccgg gtcgttcacc ggggacggca
      601 ccgccaccgg cagcttcaac accggcaaga acggcaccgt cgtcgcgacc gtcccgctca
      661 gcgcggtggg gtcgccggcc gcgggctcgc tgctcaccgc catcgaaggc gacacgtacg
      721 cgctcgaggg cgtcccgtcc aacccctcgg gggtcagcgg cggttcgctg cagacggtcg
      781 accacgacgg agccgccgcg gactacgcgc tgggccagac ctgctccccg acgccgacgc
      841 cctcgggcgg cgcgccgtca ccctcgccgt cgcccacggc tccgccgtgc agcaagctct
      901 gcttctcgaa cccgctggtg ctcccggcct cgggcgtgac cgggtcgacg tcggcgacct
      961 gctacaaccc ctgcggcgag ccatcgatgg cggtgtcgcc cgtggacggc acggtgtacg
     1021 tctccacccc gcgcacgatc gtgatctgct gtaactcgca ggcgagcccg gtctggaaat
     1081 ccggcgacga cggcaggacc tggtcgcagc cgatcttccc gtcggcgcct gagaacgcga
     1141 cgaccggggg cgacacggag ctcgcgatcg acaagcgcgg gacggtttac gaaggcgagc
     1201 tctggctcgg ctcagactcg atctacgtct cgccggacaa gggctcgacg tggagctggt
     1261 cgcccgcgtc gcacgacgtc ggcgcggacc gcgagtggtt cacctacgcc cccgccgagg
     1321 acgccctcta cgggttctac gacggcttca aggggctcat ggtcgtcaag gccccgctca
     1381 cgacgccggc gggctcgaac gccgcgctgt tcttcccgct cgagcgcgtc gtggttcccg
     1441 agtgcccgga cctcgtgtcg gtcgggcagt gcgcggtgac gccttcgtcg gccggcggca
     1501 cgccggtgct ggacggggac gtctcgccgg gccggccgag catcgccccg aacggcaccc
     1561 tctacttccc gttcccctac gaggtggcgg gacagggcgt cggcgtcgcc tacacctcgg
     1621 acggcggcca gagctaccag tacacgttcg tgaagggcgc gggtggcggg acgcttggcg
     1681 acaccggtca tgacttccca gtctccgcgg tcgactccgc cggcacgctg tacatctcct
     1741 gggtcgagaa caagggcgac ggcttcaacg tctacctctc gtcgttcaaa ggaggtgcgt
     1801 ggtcctcgcc actggaggtc tccaagggcg tttccgcgac cgcggtcttc ccgcagctcg
     1861 tggccggcgc ccccggccag gtggccgtct cgtggtacgg gaccgcggcc aaaggcgacc
     1921 ccaacacagt cagcccttcg gcttcctgga acgtctacac gactcaggtg ctcggtgccg
     1981 accgtgcggg ctcgtcgctc atcacgtcga ccgtccagac gggcttccac tcgggcccg
//
LOCUS       DATGJT010000633         3258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_814269, whole genome shotgun sequence.
ACCESSION   DATGJT010000633 DATGJT010000000
VERSION     DATGJT010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3258
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814269"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1098)
                     /locus_tag="VKX24_10920"
     CDS             complement(<1..1098)
                     /locus_tag="VKX24_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011604205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09043.1"
                     /translation="MAWDFETEPEYQAKLDWVDRFLTEDVEPLDYVLGDPYDKSDQRA
                     LAVMRPLQQKVRDRGLWAAHLTPELGGQGYGQVKLALLNELLGRSRWAPSVFGCQAPD
                     SGNAEVLAHFGTEEQKARYLRPLLDGAISSCYSMTEPHAGADPTLFRTSAVRDGDEWV
                     ITGEKWFSSNARYASFFLVMAVTNPEVSAYEGMSMFIVPADTPGLEIVRNVGTGGERA
                     EDGSHGYVRYDHVRVPADHLLGRQGGAFAIAQTRLGGGRIHHAMRTIAQVRKAFDMMC
                     ERALSRQVRRSGTGKAPGSAVETVPLATLGMTQEKIADSWIEIEQFRLLVLRTAWLID
                     KHRDYRKVRKDIAAVKAAMPKVFFDVVQRAMH"
     gene            1166..1516
                     /locus_tag="VKX24_10925"
     CDS             1166..1516
                     /locus_tag="VKX24_10925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009946335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ09044.1"
                     /translation="MQALAVHHVSVNVGDVDEALKFYCGTLGLEQRTDRPDFPFGGAW
                     LNVGGQQVHLIEGTAPPDHGQHFALLVEDLDGTVAALRTEGVDVTDPRPVGSSRQAFL
                     SDPSGNLIELHEPG"
     gene            1531..1719
                     /locus_tag="VKX24_10930"
     CDS             1531..1719
                     /locus_tag="VKX24_10930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09045.1"
                     /translation="MRRFVVAGLLGGLLVLGTPTAAFARHNHCHYGWDNWGYNYRGSH
                     YHYGSYRYDHGPENCSAG"
     gene            2086..2280
                     /locus_tag="VKX24_10935"
     CDS             2086..2280
                     /locus_tag="VKX24_10935"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HLJ09046.1"
                     /translation="MHDQVPILRPSEAAQLLGLRLSQLRHLEAVGRLVTVRTLGGHRR
                     YRQDDVLALQRWMQRRSAVA"
     gene            complement(2286..2525)
                     /locus_tag="VKX24_10940"
     CDS             complement(2286..2525)
                     /locus_tag="VKX24_10940"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HLJ09047.1"
                     /translation="MTEADPAGGGPSTTEQLRHEIDATRAQLGETVEALAHKADVKAL
                     MRDTLEDKRNAFTEQLNEAVTAARDIREHFRNRRG"
     gene            complement(2522..2923)
                     /locus_tag="VKX24_10945"
     CDS             complement(2522..2923)
                     /locus_tag="VKX24_10945"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HLJ09048.1"
                     /translation="MADVDVRDVSVAELIHRMSDQSTTLLRQEMRLIQAEMEEKAQQA
                     KAGAGLLTAAGVAGLGAFGAFVAGLILAIGQGLAMWLSAFIVAAGLVLVAAVIGLSGK
                     EKVASVVPPKPEEAIDSIRADLAEMKEAAAR"
BASE COUNT          434 a         1137 c         1164 g          523 t
ORIGIN      
        1 gtgcatggcc cgctgcacca cgtcgaagaa gaccttcggc atggccgcct tgacggcggc
       61 gatgtccttg cggaccttgc ggtagtcgcg gtgcttgtcg atcagccagg ccgtccgcag
      121 gaccagcagc cggaactgct cgatctcgat ccaggagtcg gcgatcttct cctgggtcat
      181 gcccagcgtg gccagcggca cggtctcgac cgccgaaccg ggcgctttcc cggtccccga
      241 cctgcggacc tggcgggaca gcgcccgttc gcacatcatg tcgaacgctt tgcggacctg
      301 ggcgatggtc cgcatggcgt ggtggatgcg gccgccgccg agccgggtct gggcgatggc
      361 gaaggcgccg ccctgccggc cgaggaggtg gtcggcgggg acgcgcacgt ggtcgtagcg
      421 gacgtagccg tggctgccgt cctcggcccg ttcgccgccg gtgccgacgt tgcggacgat
      481 ctcgaggccc ggggtgtcgg ccgggacgat gaacatcgac atcccctcgt aggcgctcac
      541 ctcggggttg gtgacggcca tcaccaggaa gaagctggcg tagcgggcgt tggaggagaa
      601 ccacttctcg ccggtgatga cccactcgtc gccgtcgcgt acggcgctgg tgcggaacag
      661 cgtcgggtcg gcgccggcgt ggggttcggt catcgagtag caggacgaga tcgcgccgtc
      721 gaggagcggc cggaggtacc gggccttctg ctcctcggtg ccgaagtggg ccaggacctc
      781 ggcgttaccg gagtcgggcg cctggcagcc gaacaccgac ggcgcccacc gggagcggcc
      841 cagcagctcg ttgagcaggg ccagcttcac ctgcccgtag ccctgcccgc ccagctccgg
      901 cgtcaggtgg gcggcccaca ggccccggtc gcggaccttc tgctgcaacg gccgcatgac
      961 ggccagcgcc cgctggtcgc tcttgtcgta ggggtcgcct aggacgtagt cgagcggctc
     1021 gacgtcctcg gtgaggaacc ggtcgaccca gtccagcttc gcctggtact ccggctcggt
     1081 ctcgaagtcc catgccatgg ccagggacgc taacgcggcc tgggcctgca ttgcggagcg
     1141 gccctccggg gagcagactc gcctcatgca agcactggcg gtgcaccatg tgtcggtcaa
     1201 cgtcggcgat gtcgacgagg cattgaagtt ctactgcggg accctcgggc tcgagcagcg
     1261 caccgaccgc cccgacttcc ccttcggtgg ggcctggctg aacgtcggcg ggcagcaggt
     1321 gcacctgatc gagggcaccg ctccgccgga ccacggccag catttcgcgc tgctggtgga
     1381 ggatctggac gggacggtcg ccgcgctgcg gaccgagggc gtggacgtca ccgatccccg
     1441 accggtcggc tcgagccgcc aggcattcct ctccgacccc tcggggaatc tcatcgaact
     1501 gcacgaaccc gggtagaccg aggagggctc atgaggcgtt tcgtcgtagc cgggctgctg
     1561 ggcggtctcc tcgtgctggg caccccgacc gccgccttcg cccgtcacaa ccactgtcac
     1621 tacggctggg acaactgggg ctacaactac cgcggctccc actaccacta cggctcgtac
     1681 cgctacgacc acggcccgga gaactgcagc gcggggtagg gcccccgtga acgctctgcg
     1741 tggccgctat agggcactct gaccgcggta cgtcgaactc ccgggcgttg accgcccttt
     1801 cgcggccttt cgccgtaagc aatcccgggt tgcgccgttg ttgaggacga cctttgggtg
     1861 tcggaggtgt ccccatgatg gtgccccccg gtgacggccg tccggcgtcg gcgacggtcg
     1921 atcggacgat gcggtggttc cggcggcggc tggcgcgttc caaggcgcta cggctctccg
     1981 ccgtgcgttc tcacgattgc ggttggggcg ggctgccggg gcattgcgcc ggcgagcggc
     2041 gcccggccgc ctaggtcagt agctctcgac gggaggtcga acacgatgca cgaccaggtg
     2101 ccgatcctgc ggcccagcga agccgcccag ctcctcggcc ttcgcctcag ccagctgcgc
     2161 catctcgaag ccgtcgggcg gctcgtgacc gtccggaccc tcggcggtca ccgccgctac
     2221 cgccaggacg acgtcctggc cctgcagcgt tggatgcaac gccgcagcgc cgtggcctga
     2281 gcgcgtcagc cgcggcggtt ccggaagtgt tcccggatgt cgcgggccgc ggtcacggcc
     2341 tcgttgagct gctccgtgaa ggcgttccgc ttgtcctcca gcgtgtcccg catgagggcc
     2401 ttcacgtcgg ccttgtgggc gagggcttcg accgtttccc cgagctgggc ccgggtggcg
     2461 tcgatctcgt ggcgcagctg ctcggtcgtc gacggcccac cgccggcggg gtctgcctcg
     2521 gtcatcgcgc tgccgcctcc ttcatctccg ccaggtcggc acggatgctg tcgatggcct
     2581 cctcgggctt cggggggacg accgaagcga ccttctcctt gccgctgagg ccgatgacgg
     2641 ccgccacgag aaccagcccg gcggcgacga tgaaggccga gagccacatg gcgagccctt
     2701 ggccgatcgc caggatcagc ccggccacga aggcgccgaa ggcgccgagg cctgccaccc
     2761 cggccgcggt cagcaggccc gctccggctt tcgcctgctg ggccttctcc tccatctcgg
     2821 cctggatgag gcgcatctcc tgacgcagca gcgtcgtgct ctggtcggac atccggtgaa
     2881 tgagttccgc caccgagacg tcccgcacgt cgacatcggc catgcgggcc acccccttcc
     2941 tcacgtttcg acaacaggtt ccgtacccgg aacggcccgt tccgatgtct cccgcggagt
     3001 gcccgggccc gcccgacaac tccgaggaac tgctggtggc ggagacgtga cggggccgtc
     3061 gccggtggcg ccgcccgggg cggctcacgg tggcgggctg tcctcgacgg cgtcgagcgt
     3121 ttccagggcc gggacgatgg cggcgcggtc gccgaggatg acggtcggca ggcgggcggg
     3181 ggcgaggtgc tcggcggcgg cggtgcggac gtcggcgacg gtgacccgct ccagccgtcg
     3241 ggggagctcc cggagata
//
LOCUS       DATGJT010000634         2342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1331508, whole genome shotgun sequence.
ACCESSION   DATGJT010000634 DATGJT010000000
VERSION     DATGJT010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1331508"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /gene="groES"
                     /locus_tag="VKX24_10950"
     CDS             <1..281
                     /gene="groES"
                     /locus_tag="VKX24_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018154969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HLJ09049.1"
                     /translation="KPLGDRLIVQAIEEEQTTASGIVLPDTAKEKPQKGKVLAVGDGK
                     LDDGGKRIPLDVKKDDEVLYSKYGGTEIKVDGEDLLVLRESDVLAKVA"
     gene            297..1982
                     /gene="groL"
                     /locus_tag="VKX24_10955"
     CDS             297..1982
                     /gene="groL"
                     /locus_tag="VKX24_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015583210.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HLJ09050.1"
                     /translation="MAHKEIKYNSEARKALEAGVDAVANAVKVTLGPKGRYVVLDKKF
                     GAPTITNDGVTIAKEIDLANPYENMGAQLAKEVATKTNDIAGDGTTTATVLAQAMIRE
                     GLRNVASGANPMDLKKGIEQGVKVAAAFLARIRKDIETKEEIAQVGTISAADPEIGEL
                     IADAIDKVGRDGVVEVEEGNTFGLELDYTEGLQFDKGYISPHFVTDTDRMEAVLDDPW
                     ILIVNQKVASIRDVLPVLEKVMQSGKPLLIIAEDVEGEALATLVVNRVRGTFTSAAVK
                     APGFGDRRKAMLEDIAVLTGGQVIAPELGSKLENATLDQLGRARRATITKDSTTIIEG
                     GGSPADIAGRIAQLKREIDDTDSEWDREKLQERLAKMSGGVAVIKVGAATEVELKEKK
                     HRIEDAVSATKAAIEEGIVPGGGTALLRAREAVFKAADEHLSGDIATGCRIVGHALAE
                     PLRWIAQNAGLPGGVLVSEVEAMEIGTMGLDATTGQIVDLMKAGVIDPAMVTRAALEN
                     AASVAAMILTTEAVIAEKPEKKSAAPAGMPGPGGMGGMGGMGGMGGMGGMGGF"
     gene            2015..2173
                     /locus_tag="VKX24_10960"
     CDS             2015..2173
                     /locus_tag="VKX24_10960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09051.1"
                     /translation="MERPPIDPAKLLATWMEWERGETPPGQVMASLKTGGMKELLEEL
                     TSQLQAAD"
BASE COUNT          430 a          788 c          836 g          288 t
ORIGIN      
        1 tcaagcccct gggcgaccgc ctgattgtgc aggcgatcga ggaggagcag accaccgcga
       61 gtgggatcgt gcttcccgat accgccaagg agaagccgca gaagggcaag gtcctcgccg
      121 tcggcgatgg caagctcgat gacggcggca agcgcatccc gctggatgtc aagaaggacg
      181 acgaggtcct ctacagcaaa tacggcggga ccgagatcaa ggtcgacggg gaggacctgc
      241 tcgtgctgcg cgagtcggac gtcctcgcca aggtcgcata aggagatttg acagatatgg
      301 ctcacaagga aatcaagtac aactcggagg cacgcaaagc gctggaggcc ggcgtcgacg
      361 ccgtcgccaa tgcggtcaag gtcacgctcg gcccgaaggg ccgttacgtg gtgctcgaca
      421 agaagttcgg cgcgccgacg atcaccaacg acggcgtgac catcgccaag gagatcgacc
      481 tggccaaccc ctacgagaac atgggggcgc agctggccaa ggaggtcgcc accaagacca
      541 acgacatcgc cggcgacggc accaccaccg ccaccgtgct ggcccaggcg atgatccggg
      601 aaggcctgcg caacgtggcc tccggcgcca acccgatgga cctgaagaag ggcatcgagc
      661 agggcgtgaa ggtcgccgcc gccttcctcg cccgcatccg caaggacatc gagacgaagg
      721 aggagatcgc ccaggtcggg acgatctccg ccgccgaccc cgagatcggc gagctcatcg
      781 ccgacgccat cgacaaggtc ggccgcgacg gcgtcgtcga ggtcgaggag ggcaacacgt
      841 tcggcctcga gctggactac accgagggcc tccagttcga caagggctac atctcgcccc
      901 acttcgtcac cgacacggac cggatggaag ccgtcctcga cgacccctgg atcctgatcg
      961 tcaaccagaa ggtggcgtcg atccgcgacg tcctgccggt cctcgagaag gtgatgcagt
     1021 cgggcaagcc gctgctgatc atcgccgagg acgtcgaggg cgaggcgctg gcgacgctgg
     1081 tcgtgaaccg agtgcggggg acgttcacgt cggcggcggt gaaggccccc ggcttcggcg
     1141 accgccgcaa ggccatgctg gaggacatcg ccgtcctcac cggcggccag gtcatcgccc
     1201 ccgagctcgg cagcaagctg gagaacgcca cgctcgacca gctcggccgg gcccgccggg
     1261 ccacgatcac caaggactcc accacgatca tcgagggcgg cggttcgccc gccgacatcg
     1321 ccggccgcat cgcccagctc aagcgggaga tcgacgacac cgactcggag tgggaccggg
     1381 agaagctcca ggagcgcctg gccaagatgt cgggcggcgt ggccgtcatc aaggtggggg
     1441 cggccacgga agtggagctg aaggagaaga agcaccgcat cgaggacgcc gtgtccgcga
     1501 ccaaggcggc catcgaggag ggcatcgtgc ccggcggggg aaccgccctg ctccgggccc
     1561 gggaggcggt cttcaaggcc gccgacgagc acctctccgg tgacatcgcc accggttgcc
     1621 ggatcgtcgg ccatgcgctg gccgagccgc tgcgctggat cgcccagaac gccgggctgc
     1681 ccggtggcgt gctggtgtcc gaggtcgagg ccatggagat cgggacgatg ggtctcgacg
     1741 ccaccaccgg ccagatcgtc gacctgatga aggccggcgt catcgacccc gccatggtca
     1801 cccgggccgc cctggagaac gccgcctcgg tggcggccat gatcctcacc accgaggccg
     1861 tcatcgccga gaagcccgag aagaagagcg ccgccccggc cggcatgccg ggccccggtg
     1921 gcatgggcgg gatgggtggc atgggcggga tgggtggcat gggaggcatg ggcggcttct
     1981 agcccgccgc ggtgccggcg gtaggcttgg ccgggtggaa cgacctccga tcgacccggc
     2041 caagctgctc gccacctgga tggagtggga gcggggcgag acgccgcccg ggcaggtcat
     2101 ggccagtctc aagacaggcg gcatgaagga gttgctcgag gagctgacct cgcagctcca
     2161 agccgccgat tgacgtggtc gcccgccggg gcggcgccca gaagatcccc cgtccgccga
     2221 cgatccggct cggcgggccg ccggcctggg ccgggctggc gcccgaggcc cgacggctgc
     2281 gcctcgacga cgtccgccgc cgctgcaagg agttcccggc gccgccctcg gcgccccgga
     2341 tt
//
LOCUS       DATGJT010000635         3440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_496133, whole genome shotgun sequence.
ACCESSION   DATGJT010000635 DATGJT010000000
VERSION     DATGJT010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3440
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496133"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VKX24_10965"
     CDS             complement(<1..633)
                     /locus_tag="VKX24_10965"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ09052.1"
                     /translation="MSAPAGPLDPDGTAVVVGASLAGLRASEALRRGGFRGRLVLVGA
                     EPHPPYDRPPLSKQVLAGTWEPEKAGLVDRAGLEALGVEARLGVRATSLDAADRRVTL
                     EDGSRLDADGVVVATGSAPRHPFAEEGVLVLRTLEDCRRLRDAMVSLEGSARLAVIGA
                     GFIGSEVAATCSALAERVTVIEALPVPLAAALGETVGAALGALHWRNGVHL"
     gene            complement(630..1358)
                     /locus_tag="VKX24_10970"
     CDS             complement(630..1358)
                     /locus_tag="VKX24_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016334035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLJ09053.1"
                     /translation="MSGPAGGDRLYFRQLLSGRDFATGDQVAQQMVNFVYLIGDRERG
                     EAVIVDPAYAVGDLLAVLEEDGMRCVGALVTHYHPDHVGGSMGPWRIEGAGALLERVD
                     VPVHVQRAEVPWVQRSTGLEEADLVAHDSGDVVAVGDLEVRLLHTPGHTPGSQCFLVE
                     GRLVSGDTLFLEGCGRTDLPGSDPLAMYESLTTRLAAVPDDTVLYPGHRYSAAPSAPM
                     AEVRRENFVFLPRSAEQWLAMFGR"
     gene            complement(1355..1639)
                     /gene="xseB"
                     /locus_tag="VKX24_10975"
     CDS             complement(1355..1639)
                     /gene="xseB"
                     /locus_tag="VKX24_10975"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR01280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HLJ09054.1"
                     /translation="MTDEPTRSVEDLSYAEASRELDEIVAAFEQGDLDLDRLVGRLER
                     ATAIVEELDRRLRRTRAQVEDLVPRLEAAAAARDEPGDGAPAGDEPGLFS"
     gene            complement(1636..3012)
                     /gene="xseA"
                     /locus_tag="VKX24_10980"
     CDS             complement(1636..3012)
                     /gene="xseA"
                     /locus_tag="VKX24_10980"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HLJ09055.1"
                     /translation="MRRPGYRPGRPDAPTLFSEAGSDVLSIAQLYARVDRALIAEFPP
                     RDPLWVRGEVQTISDRTGHCYIDLVDPETAEDRQAPVVKVRCWRQTWGPLRAQLAKSG
                     LELTPGTVVQLFGRLEFYRPRAEVSLVMAGLDVTALLGKLAADRAALLGALREEGLLE
                     ANGRLEVPPVVLAVGLVASPDTEGCRDFLKQLENSGFSFSVALSRASVQGTEAPRSIA
                     RAIRRAGTARPDLVVVVRGGGSKADLVAFDSAPVARAIATCPVPVWTGIGHTGDESVA
                     DIVANRSFVTPTECGHELAARIEGFWLRSVAGPSAAIGRYAHRALEAADRHLAAGQGR
                     VSGTARQHLRWHRERLEQRIGSLVRSAPAATAGQSARVAASTARLGAAARRGLADAEE
                     KAAGWRRLLSAFDLDRQLERGYTITTDDDGRILRSAAALASGNVLRTRFADGTARSVV
                     TEESGGGR"
     gene            complement(3092..>3440)
                     /locus_tag="VKX24_10985"
     CDS             complement(3092..>3440)
                     /locus_tag="VKX24_10985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09056.1"
                     /translation="ANGLHTMAKGAFPFLEKVPPEPFAKTLAATEVALGTALALPILP
                     DRLAGLALTPFAGGLVWMYTQTDSMHEPDSLRPSRQGIGLAKDLWLLGIGLTLLLTGR
                     GGRKKAPKPAKES"
BASE COUNT          444 a         1296 c         1296 g          404 t
ORIGIN      
        1 caggtgcacg ccgttgcgcc agtgcagcgc gccgagggcg gcgccgaccg tctcgccgag
       61 cgcggcggcg aggggcacgg gcagggcctc gatgaccgtc accctctcgg ccagcgccga
      121 acaggtggcc gcgacctccg agccgatgaa cccggcgccg atcaccgcca ggcgggcgct
      181 cccctccagc gagaccatgg cgtcgcgcag gcgccggcag tcctcaaggg tacgcaacac
      241 gagcaccccc tcctcggcga aggggtgcct cggtgccgag ccggtggcga cgacgacacc
      301 gtcggcgtcg agacggctgc cgtcctcgag ggtcacccgc cggtcggcgg cgtcgagcga
      361 ggtcgcccgc accccgagcc gggcctcgac gccgagggcc tccagccccg cccggtcgac
      421 gagccccgcc ttctccggct cccaggtgcc ggcgagcacc tgcttggaca ggggcggccg
      481 gtcgtagggg gggtggggct cggcgccgac cagcaccagc cggccgcgga acccaccgcg
      541 ccgcagcgcc tccgacgccc gcagcccggc caacgacgcg cccaccacga cggcggtgcc
      601 gtcggggtcg agcggccctg ccggggcgct caccgcccga acatggccag ccactgctcg
      661 gcggagcggg gcaggaagac gaagttctcg cggcgcacct cggccatggg cgccgacggc
      721 gccgccgagt accggtgccc ggggtagagg acggtgtcgt cggggaccgc cgccagcctg
      781 gtggtgagcg actcgtacat ggcgagcggg tcgctgcccg gcaggtcggt ccgcccgcac
      841 ccctcgagga agagggtgtc cccggacacg aggcgcccct cgacgaggaa gcactggctg
      901 cccggggtgt ggcccggggt gtggaggagc cgcacctcga ggtcgccgac ggcgaccacg
      961 tcgccgctgt cgtgggccac gaggtcggcc tcctcgaggc cggtcgaccg ctgcacccac
     1021 ggcacctcgg cccgctgcac gtgcaccggg acgtccaccc gctcgaggag cgcgcccgcc
     1081 ccttcgatgc gccagggccc catggagccc ccgacgtggt ccgggtggta gtgggtgacg
     1141 agggcgccga cgcagcgcat gccgtcctcc tcgagcacgg ccaggaggtc gccgaccgcg
     1201 taggccgggt cgacgatgac ggcctcgccc cgctcccggt ccccgatcag gtagacgaag
     1261 ttgaccatct gctgggccac ctggtccccg gtcgcgaagt cccggcccga caggagctgg
     1321 cggaagtaga ggcggtcgcc gccggcgggg ccgctcacga gaacagcccc ggctcgtcgc
     1381 ccgcgggcgc cccgtcaccg ggctcgtcac gggcggcagc ggcggcctcg aggcgcggca
     1441 ccaggtcttc gacctgggcc cgggtgcggc ggaggcggcg atcgagctct tcgacgatcg
     1501 ccgtcgcccg ctccaggcgc ccgacgagcc ggtcgaggtc gaggtcgccc tgctcgaacg
     1561 cggccacgat ctcgtccagc tcccggctgg cctcggcgta gctgaggtcc tcgaccgacc
     1621 gggtcggttc gtccgtcatc gccctccccc gctctcctcg gtgacgaccg aacgcgccgt
     1681 tccgtcggcg aaccgggtgc ggagcacgtt gccgctcgcc agggcggcgg ccgaccgcag
     1741 gatgcgcccg tcgtcgtcgg tcgtgatcgt gtagccccgc tcgagctggc ggtcgaggtc
     1801 gaaggccgac aacagccggc gccagccggc cgccttctct tcggcgtcgg cgagcccgcg
     1861 gcgggcggcc gcaccgagtc gggcggtgct cgccgcgacc cgggccgact gcccggcggt
     1921 ggccgcgggg gcggagcgga ccagcgagcc gatgcgctgc tccagtcgtt cgcggtgcca
     1981 gcggaggtgt tggcgggcgg tgcccgacac ccgcccctgc cccgcggcca ggtggcggtc
     2041 ggccgcctcg agggcgcgat gggcgtaacg gccgatggcg gcggacgggc ccgccaccga
     2101 gcggagccag aacccttcga tgcgggcggc cagctcgtgg ccgcactcgg tcggggtgac
     2161 gaacgaccgg ttggccacga tgtcggcgac ggactcgtcg ccggtgtgcc cgatcccggt
     2221 ccacaccggc accgggcagg tggcgatcgc ccgggcgacc ggcgcgctgt cgaaggcgac
     2281 gaggtcggcc ttggaccccc cgccgcgcac gaccaccacg aggtccggac gcgccgtccc
     2341 ggcccgccgg atggcccgcg cgatcgagcg gggggcctcc gtcccctgga ccgacgcccg
     2401 ggagagggcg acggagaaag agaaccccga gttctcgagc tgcttcagga agtcccggca
     2461 tccttcggtg tcggggctgg ccacgaggcc gacggcgagc acgaccggtg gcacctcgag
     2521 ccgcccgttc gcctcgagga gcccctcctc gcgcagcgcc ccgagcaacg ccgcccggtc
     2581 ggccgccagc ttgcccagga gggcggtcac gtcgagcccg gccatgacca ggctgacctc
     2641 cgcccggggc cggtagaact cgagccggcc gaagagttgg accacggtgc ccggcgtcag
     2701 ctcgagcccc gacttggcca gctgggcccg gagcgggccc caggtctggc gccagcagcg
     2761 caccttcacg accggcgcct ggcggtcctc ggcggtctcg gggtcgacga ggtcgatgta
     2821 gcagtgcccg gttcggtccg agatcgtctg cacctcgccc cgcacccaca gcggatcgcg
     2881 gggcgggaac tcggcgatga gggcgcggtc gacccgggcg tacagctggg cgatggacag
     2941 gacgtcgctg ccggcctcgg agaacagcgt cggcgcgtcg ggtcggccgg gccggtaccc
     3001 gggccgcctc acctgcgccg gcccgcggac ggggcgcgcc gggtcactcg cacgggacga
     3061 atctacgaca gggtcgggac ggccaggtcc cctacgactc cttggccggc ttcggcgcct
     3121 tcttcctccc gcccctgccc gtcagcagca gggtcaggcc gatgccgagc agccagaggt
     3181 ccttggccag cccgatcccc tgtcggctcg gacggaggct gtccggctcg tgcatggagt
     3241 cggtctgggt gtacatccag acgaggccgc ccgcgaacgg cgtcagcgcc agcccggcca
     3301 gccggtccgg gaggatcggc agggcgagcg ccgtgcccaa cgcgacctcg gtcgccgcca
     3361 aggtcttggc gaagggttcg ggcggcacct tctccaggaa cgggaaggcc cccttggcca
     3421 tggtgtggag cccgttggcg
//
LOCUS       DATGJT010000636         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_814356, whole genome shotgun sequence.
ACCESSION   DATGJT010000636 DATGJT010000000
VERSION     DATGJT010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814356"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1051
                     /locus_tag="VKX24_10990"
     CDS             <1..1051
                     /locus_tag="VKX24_10990"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLJ09057.1"
                     /translation="PEPVVEAAAKAIADGRVRYTSSLGIPELREAISGYYAERFGVAV
                     PARRVVVTTGASGALLLALAATIDRDHEVLLADPGYPCNRNLIRLCEGVPAGIPVGAG
                     TDYQLTAGLVDGRWTAQTRAVLLATPSNPTGTMVPPGELAAIAAEADARGGVCFVDEI
                     YGELVYDRRPATVLASTDTAFVVNSFSKTFGMTGWRLGWMVCPEWALAAVEALSQNAF
                     ISPPAPAQYGALAAFTPEVWAVVEERRRAFAARRDVLLDGLRAAGFGVAVTPPGAFYV
                     YARSDGLDPDSMRLARRLLDEAGVAAVPGCDFGDHEPQAHLRFAYTTSLDQITEAVRR
                     LIAWREHGPATSQEE"
     gene            1048..1323
                     /locus_tag="VKX24_10995"
     CDS             1048..1323
                     /locus_tag="VKX24_10995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09058.1"
                     /translation="MTVGILDKVKQQAAQLKDNEKVKEVTDKVKEKVEDVQARRKAND
                     LLADLGRLFYAQHTGRTNATAEAEIARLVAELRALEDDGLTILPEQG"
     gene            complement(1327..2028)
                     /locus_tag="VKX24_11000"
     CDS             complement(1327..2028)
                     /locus_tag="VKX24_11000"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF and ANTAR domain-containing protein"
                     /protein_id="HLJ09059.1"
                     /translation="MTDPEDLGTAVRTLSRLLLAEETLETTLHRVASLACRTLSPCDL
                     ASVTMITDGRPSTPVHTDPEADDLDRAQYRSQRGPCLEAYDVGQVVRRTIADGGAGWP
                     EFTAEAKKSGVRSVLAVPLVASDRPLGALNLYSKTDSYSEADEDTAVLFSEQAAVACA
                     NAEVYWRTYSLTEHLREALESRDIIGQAKGILMARRGCTPDVAFEALRKVSQHRNIKL
                     RQIAEQVVYLGDLDD"
     gene            complement(2091..>2430)
                     /locus_tag="VKX24_11005"
     CDS             complement(2091..>2430)
                     /locus_tag="VKX24_11005"
                     /EC_number="6.2.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018586551.1"
                     /note="AcsA; in Sinorhizobium meliloti this enzyme is
                     required for acetoacetate activation; similar to
                     acetyl-CoA synthase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HLJ09060.1"
                     /translation="SLVVHLEDRAGEGIGMGELLLFVVPAGGGEVGDDLKARIAAELR
                     RSLSPRHVPDAIHAVSGIPRTLSGKKLEVPVKRILTGTPTDVAASRGALANPDSLEDF
                     ERLATERASP"
BASE COUNT          344 a          869 c          874 g          343 t
ORIGIN      
        1 gccggagccg gtggtggagg cggcggccaa ggccatcgcc gacggccggg tgcgctacac
       61 gtcgtcactc gggatccccg agctccggga ggcgatcagc ggctactacg ccgagcggtt
      121 cggcgtcgcc gtccccgccc ggcgggtggt cgtcaccacc ggcgcctccg gggcgctgct
      181 gctggcgctg gccgccacca tcgaccggga ccacgaggtt ctcctggccg atcccggtta
      241 cccctgcaac cgcaacctga tccggctctg cgaaggcgta ccggccggca tccccgtcgg
      301 agcggggacc gactaccagc tcacggcggg gctcgtcgac ggccggtgga cggcgcagac
      361 gcgggccgtg ctgctggcca ccccgtccaa ccccaccggc acgatggtgc caccgggcga
      421 gctggccgcc atcgccgccg aggccgacgc ccggggcggc gtgtgcttcg tcgacgagat
      481 ctacggcgag ctcgtctacg accggcggcc ggccaccgtc ctggcctcga ccgatacggc
      541 cttcgtcgtc aacagcttct ccaagacctt cggcatgacg ggctggcgcc tcgggtggat
      601 ggtctgcccc gagtgggcgc tggcggcggt ggaggccctg agccagaacg ccttcatctc
      661 gccgccggcc ccggcccagt acggcgccct cgccgctttc acgcccgagg tgtgggcggt
      721 ggtggaggag cgccgccggg ccttcgccgc ccgccgcgac gtcctcctcg acgggctccg
      781 ggccgccggc ttcggcgttg cggtgacgcc gccgggggcc ttctacgtct atgcccgctc
      841 cgacgggctc gaccccgaca gcatgcgcct cgcccgccgt ctcctcgacg aggccggcgt
      901 cgccgccgtc ccgggctgcg acttcggcga ccacgaaccg caagcccatc tccgcttcgc
      961 ctacacgacg tccctcgacc agatcaccga agccgtccgc cgcctcatcg cctggcgaga
     1021 gcacgggccg gccacgagcc aggaggaatg accgtgggaa tcctcgacaa ggtgaaacag
     1081 caggccgcgc agctcaagga caacgagaag gtcaaggagg tgacggacaa ggtcaaggag
     1141 aaggtggagg acgtccaggc ccggcgcaag gccaacgacc tcctcgccga cctcggccgt
     1201 ctcttctacg cccagcacac cgggcggacc aacgccaccg ccgaggcgga gatcgcccgt
     1261 ctggtcgccg agctgcgcgc cctggaggac gacggcctca cgatcctccc cgagcagggg
     1321 tagacgtcag tcgtcgagat cgccgagata gacgacctgc tcggcgatct ggcgcagctt
     1381 gatgttgcgg tgctgggaca ccttccgcag cgcctcgaag gcgacatcgg gcgtgcagcc
     1441 ccggcgggcc atgaggatgc ccttggcctg gccgatgatg tcgcggctct cgagcgcctc
     1501 ccggaggtgc tcggtcaggg agtaggtgcg ccaatagacc tcggcgttgg cgcaggccac
     1561 ggcggcctgc tcgctgaaga ggacggcggt gtcctcgtcc gcctcggaat agctgtcggt
     1621 cttggagtag aggttcagcg ccccgagcgg gcggtcgctg gccaccaggg ggacggccag
     1681 caccgaccgg acgccgctct tcttcgcctc ggcggtgaac tccggccacc cggccccgcc
     1741 gtcggcgatg gtccgccgca cgacctggcc gacgtcgtag gcctccaggc agggaccccg
     1801 ctgcgaccgg tactgcgccc ggtcgagatc gtcggcctcc gggtcggtgt ggacgggggt
     1861 ggacggccgt ccgtcggtga tcatcgtcac gctggccagg tcgcagggcg agagcgtccg
     1921 gcaggccagg ctggcgacgc ggtggagggt ggtctcgagg gtctcctcgg cgaggaggag
     1981 acgggacagg gtgcggacgg cggtgccgag gtcctcggga tcggtcatgg ctgaaactgg
     2041 cctccaggaa cgggtcaggc cagccacgac gtcggagtct caagggcgtg tcagggggaa
     2101 gccctctcgg tcgccagtcg ctcgaagtcc tcgagcgagt cggggttggc cagtgctccc
     2161 cggctcgccg cgacgtcggt cggcgttccg gtgaggatgc gcttcacggg tacttccaat
     2221 ttcttccccg acagcgtccg gggtatgcca gaaactgcat gaatcgcgtc ggggacgtgg
     2281 cggggcgaca gcgaccggcg cagctcggcg gcgatgcggg ccttcaggtc gtcgccgacc
     2341 tcgccgcctc cggccggcac gacgaagagc agcagctccc ccatcccgat gccctcgccc
     2401 gcccggtcct cgaggtggac gacgaggctg
//
LOCUS       DATGJT010000637         3766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_814729, whole genome shotgun sequence.
ACCESSION   DATGJT010000637 DATGJT010000000
VERSION     DATGJT010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814729"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VKX24_11010"
     CDS             complement(<1..650)
                     /locus_tag="VKX24_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012933169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HLJ09061.1"
                     /translation="MNLYNTLTRTEDALPAPPGPIRMYFCGPTVYRRIHVGNARPFVI
                     SAWLRRWLAELGYQVTLVQNITDVNDKIYQAAPGASAQLAKDAAAWYIEDTDRLGLGR
                     PDVEPRATETIDEQIALIEELFRRDLAYAADGDVYFRVSRFPSYGQLSGQRPDQVQEQ
                     EPNARKEDPRDFALWKGHKEGEDTFWESPWGPGRPGWHIECSAMAETFLGPVFEIHG"
     gene            704..1669
                     /locus_tag="VKX24_11015"
     CDS             704..1669
                     /locus_tag="VKX24_11015"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HLJ09062.1"
                     /translation="MVRELDGKVMPGRGAGRWWCVALVTVGSCVLAGCQGEPSPTVAT
                     PPNPTSAPASVLAACTVSSGTPAPATPAASSDGNYTNAQPGVLSVGSVTADPPFESVS
                     NGTAVGFDIDLIAEVARRLGLEPEIVGESASSLLSDVARGRTDVAISAIDITASREAA
                     VDFTNPYFTDDLALTVGVGRARNFGGIGTLAGKTVGVAAGSSGEACARAVSAGGSAQG
                     KAFTIKPYTTISQAFTDLADGKIDGVLTDLPTSERLVQAIDGLQMVEIYRTGEGYGIA
                     VAKTNPNLRIDIDRILADMVSDGTYKLIYEKWFQVPPPPPPSPSS"
     gene            complement(1630..3042)
                     /locus_tag="VKX24_11020"
     CDS             complement(1630..3042)
                     /locus_tag="VKX24_11020"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HLJ09063.1"
                     /translation="MDDLQPALDWVEAYLATVGELPVAARVAPGDITAALPASPPAGG
                     EELTAILEDLDRILLPGVTHWNHPGFFGYFAITGSAPGIAGELISAALNLNGMLWRTS
                     PALTELEAVATRWLAQLLGLPDWLGVIHDTASSSTLTALAAARHRADPGARQRGLRGG
                     PPLAVYASDQAHSSVDKAVLTLGLGTDQLRKIPCDGAFRMDAGALAARIEADADRGIR
                     PMAVVATVGTTATTSVDPVPAIAEICAAHGSWLHVDAAYGGAAGAVPELRWVVEGTDR
                     ADSIVVNPHKWLFVPVDCSVLYLRDPEATRAAFSVVPDYLRAPEEATNLMDYGVALGR
                     RFRALKLWMVLRAYGTERIAATLREHVRLAQLLASWVEADPAFSLAAPVPLSVVNLRR
                     TPAGAPPEEQDRLTAALVDRINAGGRAYVTTASVASRTALHAAIGRLDHTEAGVAALW
                     RLITETADQLDGDGGGGGGT"
     gene            complement(3052..3462)
                     /locus_tag="VKX24_11025"
     CDS             complement(3052..3462)
                     /locus_tag="VKX24_11025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009708831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HLJ09064.1"
                     /translation="MDEPMDEPIVPEGALLKKLGLEWIETTPERVVGRMPVEGNTQPL
                     GLLHGGASAALAESLASFGGWLAAPTQLVLGLELKINHLRPAREGWLTGTAVPIHLGR
                     TTQLWEVRITNDEGRLIAFSTCTLAVRSAQAPPA"
     gene            complement(3501..>3766)
                     /locus_tag="VKX24_11030"
     CDS             complement(3501..>3766)
                     /locus_tag="VKX24_11030"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HLJ09065.1"
                     /translation="EACVVVNGERVVLGMLRAAELAKDPGLRIEQAMRPGPSTYRPNV
                     PVAELAKVMADTHRPCLPVTTSDGRLVGLLLQRDAEAATGTGA"
BASE COUNT          511 a         1338 c         1408 g          509 t
ORIGIN      
        1 ccgtggatct cgaagaccgg cccgaggaag gtctcggcca tcgccgagca ctcgatgtgc
       61 cagccggggc gaccgggccc ccacggggac tcccagaagg tgtcctcccc ctccttgtgg
      121 cccttccaca gggcgaagtc ccgcggatcc tccttgcggg cgttgggttc ctgctcctgg
      181 acctggtcgg gccgctgccc ggagagctgc ccgtagctgg ggaagcggga gacccggaag
      241 tagacgtcgc cgtcggcggc gtaggcgagg tcgcgccgga acagctcttc gatcagggcg
      301 atctgctcgt cgatcgtctc ggtcgcccgc ggctcgacgt cggggcggcc gaggcccagc
      361 cggtcggtgt cctcgatgta ccaggcggcc gcatccttgg cgagctgggc actggcgccc
      421 ggagccgcct ggtagatctt gtcgttgacg tcggtgatgt tctgcaccag cgtgacctgg
      481 tagcccagct cggccagcca ccggcgcagc caggccgaga tcacgaaggg ccgggcattg
      541 ccgacgtgga tgcgccggta gacggtcggg ccacagaagt acatgcggat ggggccggga
      601 ggcgcgggaa gggcgtcctc cgtgcgggtc agggtgttgt acaggttcat gggaccccac
      661 gatagcgtcg cgcccgggca tcggtcccgg cccggtcgct accatggtgc gcgaactcga
      721 cgggaaggtc atgccgggac gcggtgctgg caggtggtgg tgcgtggccc tggtcaccgt
      781 tggcagctgc gtcctcgccg gctgccaggg ggagccgtcg ccgaccgtgg ccacgccccc
      841 gaacccgacg tcggcccccg ccagcgtcct cgccgcctgc accgtcagct cgggcacccc
      901 cgccccggcc acgccggcgg catcgagcga cggcaattac accaacgccc agccgggggt
      961 gctgtcggta ggctcggtca ccgccgaccc gccgttcgag agcgtctcca acgggaccgc
     1021 ggtcggcttc gacatcgacc tgatcgccga ggtcgcccga cgcctcggcc tggagccgga
     1081 gatcgtgggg gagagcgcgt cgagcctgct cagcgacgtc gcccggggca ggaccgacgt
     1141 cgccatctcg gcgatcgaca tcaccgcctc ccgggaggcg gccgtcgact tcaccaaccc
     1201 gtacttcacc gacgacctgg cgctgacggt cggcgtcggc cgggcgcgca acttcggggg
     1261 catcggaaca ctcgccggca agacggtcgg ggtggccgcc ggcagctccg gcgaggcctg
     1321 cgcccgggcg gtgtcggccg gaggctcggc acagggcaag gcgttcacga tcaagccgta
     1381 caccaccatc tcgcaggcgt tcaccgacct ggccgacggg aagatcgacg gcgtcctcac
     1441 cgacctcccg acctcggagc ggctggtcca ggcgatcgac ggcctgcaga tggtcgagat
     1501 ctaccgcacc ggggaggggt acgggatcgc cgtcgcgaag accaacccca acctccggat
     1561 cgacatcgac cggatcctgg ccgacatggt ctccgacggg acctacaaac tgatctacga
     1621 gaagtggttt caggtcccgc cgccaccccc gccgtcgccg tcgagctgat cggccgtctc
     1681 ggtgatcagc cgccacagtg cagcgacgcc ggcctcggtg tggtcgagcc ggccgatggc
     1741 ggcgtggagc gcggtgcggc tggcgacgga ggccgtcgtc acgtaggccc ggcccccggc
     1801 gttgatgcgg tcgaccagcg ccgcggtcag ccggtcctgt tcctccggcg gtgcgccggc
     1861 cggggtccgg cgcaggttga ccaccgacag cggcaccggt gcggcgaggc tgaacgctgg
     1921 gtcggcctcg acccaggagg cgagcagctg cgccagccgt acgtgctcgc gcagggtggc
     1981 ggcgatgcgc tcggtgccgt aggcacgcag caccatccag agcttcaacg cccggaaccg
     2041 gcggccgagg gcgacgccgt agtccatcag gttggtcgcc tcctccggcg cccggaggta
     2101 gtcgggcacc accgagaagg ccgcccgggt ggcctccggg tcgcgcaggt agagcacgct
     2161 gcagtcgacg ggcacgaaca gccacttgtg cgggttgacc acgatcgagt ccgcccggtc
     2221 ggtcccctcg acgacccagc gcagctccgg gaccgccccc gccgccccgc cgtaggctgc
     2281 gtcgacgtgc agccacgacc cgtgggcggc gcagatctcg gcgatggccg ggaccgggtc
     2341 gacgctggtg gtggccgtcg tcccaaccgt ggcgacgacg gccatcgggc ggatgccccg
     2401 gtcggcgtcg gcctcgatgc gggcggcgag cgccccggcg tccatccgga aggcgccgtc
     2461 gcaggggatc ttccgcagct ggtcggtgcc gagcccgagg gtcaggaccg ccttgtccac
     2521 cgaggagtgg gcctggtcgg aggcgtagac ggccagcggc ggcccgcccc gcaggccccg
     2581 ctgccgggcg ccgggatcgg cccggtggcg ggcggcggcg agcgcggtca gggtgctgga
     2641 cgaggcggtg tcgtggatca cccccagcca atcgggcagg ccgagcagct gggcgagcca
     2701 gcgggtggcg accgcctcga gttcggtgag ggccgggctc gtccgccaca gcatgccgtt
     2761 gaggttgagc gcggccgaga tcagctcgcc ggcgatgccc ggcgccgatc cggtgatggc
     2821 gaagtagccg aagaatccgg ggtggttcca gtgggtgacg ccgggcagca ggatgcggtc
     2881 gaggtcctcg aggatcgccg tcagctcctc cccgccggcg ggtggcgacg ccggcagcgc
     2941 cgcggtgatg tcgcccggcg ccacccgggc ggccacgggc agttcaccga ccgtggcgag
     3001 gtaggcctca acccagtcga gcgccggttg gaggtcgtcc accggagcca gctacgccgg
     3061 cggcgcctgg gcggagcgca cggcgagggt gcaggtggag aaggcgatca gccgcccttc
     3121 gtcgttcgtg atgcgcacct cccacagctg ggtcgtgcgg ccgaggtgga tcggcaccgc
     3181 cgtcccggtg agccacccct cccgagccgg ccggaggtgg ttgatcttga gctcgaggcc
     3241 gaggacgagc tgggtcgggg cggcgagcca gccgccgaac gaagcgaggc tctcggcgag
     3301 ggccgccgac gccccgccgt ggagcagccc gagcggctgg gtgttgccct cgaccggcat
     3361 ccgcccgacg acccgctccg gcgtggtctc gatccactcc aggccgagct tcttgagcag
     3421 cgccccttcg gggacgatcg gttcgtccat gggctcgtcc atgggccgga gcatgccaca
     3481 ccgggcctgc ccggcggccg ctacgccccg gtgccggttg ccgcctcggc gtcccgctgg
     3541 aggaggagcc ccaccaggcg cccgtcggag gtcgtcaccg gcaggcaggg acggtgggtg
     3601 tccgccatca ccttggccag ctcggcgacc gggacgttcg gccggtaggt gctcggcccg
     3661 ggccgcatcg cctgctcgat gcggagtccg gggtccttcg ccagctcggc tgcccgcagc
     3721 atcccgagga cgacccgctc gccgttgacc acgacgcagg cctccc
//
LOCUS       DATGJT010000638         4078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_87306, whole genome shotgun sequence.
ACCESSION   DATGJT010000638 DATGJT010000000
VERSION     DATGJT010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4078
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87306"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VKX24_11035"
     CDS             <1..528
                     /locus_tag="VKX24_11035"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ09066.1"
                     /translation="RPELCPSLTVMDNVALGCEALAAGGNLWRQIVPRRRDTARLREQ
                     AARALAECGIAELAGTPVAVLSVGQRRLVELARVAAGGYRLLLLDEPSSGLDPAETAR
                     FGAIVRHLVEDAGVGVLLVEHDMSLVMEVCDFLYTLDFGRLIFAGPPAETRASAAVRA
                     AYLGDDDAALSARER"
     gene            539..1237
                     /locus_tag="VKX24_11040"
     CDS             539..1237
                     /locus_tag="VKX24_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019875760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ09067.1"
                     /translation="MLRLDGIRAGYGQATVLRDVSVVVPDGAAVALLGPNGAGKTTLL
                     RVASGLLRPFAGRVVLDGEDVTAAPPQRRRRLGLCHVPERGGVFADLTVAENLRLFAP
                     PGHEDEAVDRAVAAFPALGSRLGQPAGTLSGGEQQMVALSRVHGERSRVVLLDEVSMG
                     LAPRLVDTIFAFLEGLAASGVSLLVVEQYVAKALAIADYVCLLDRGRTSFVGEPGELD
                     SAGLAARYLGGAQA"
     gene            complement(1500..2114)
                     /locus_tag="VKX24_11045"
     CDS             complement(1500..2114)
                     /locus_tag="VKX24_11045"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ09068.1"
                     /translation="MPKRAAAEPARPAAAPRRRNAREEIYKAALAAFERHGVRRTLMD
                     DVAREAGVSRPTIYYYFPDKDALVLEVIVRQVREIHRRIRQRIRLEDGLPAMIEASLT
                     TIRLSGENQYIRLLTQPDTAGLTARLAESDIVMGLQRELWYPLLEAARDRGELRTDRD
                     FDDIIRWITFLEFSLISSGDVFGYAADECRDVLSAYLVPALRSD"
     gene            2198..2938
                     /locus_tag="VKX24_11050"
     CDS             2198..2938
                     /locus_tag="VKX24_11050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09069.1"
                     /translation="MAARNQGSKAGPAQAVKATAATAAKTAKATAKATAKTAAKTART
                     AAKTAKVPVDTVVNAAKTMVAKAAGTAKATVAKAAPAGKPAARTARTAASTAKTAATS
                     ATAAPGRAVKATRAAGTRAAAGAKRAAGTVGAGRPAEPARGQIGDNAAPAATTEAPAL
                     ATPLPGRKSPAAKAGGTAKAPAAKAGGATKSSAKKTGGTAKKTGETAKKTGGTAKKTS
                     GTAKKTGETAKASSAAKPAARRTTTKKS"
     gene            2935..>4078
                     /locus_tag="VKX24_11055"
     CDS             2935..>4078
                     /locus_tag="VKX24_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005251446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09070.1"
                     /translation="MSMDFSPSPRCQELHAELTRFMAERVYPAEDVYEEQMAASGDPH
                     HHAPVIEELKVEARRRGLWNLFLPHKTEWTDGLSNTDYAPLAEVMGRSPIASEVCNCS
                     APDTGNMEILTMFGTVEQQEQWLQPLLEGEIRSAFAMTEPQVASSDATNIACSIRRDG
                     DDYVINGRKWFISGALHPHCRILIVMGKTDPDAAPHRQQSMVLVPMDTPGVTILRNML
                     VFGYDDAEGHVEMTLEDVRVPVSNLLGEEGGGFAIAQARLGPGRIHHCMRTIGAAERA
                     LELMCRRAHARSPFGKPLADQGVVQTWVADARIAIDQARLYTLYTAWLMDTAGNKAAR
                     TEVSGIKVAVPNMALDVIDHAMQTHGAMGVSQDTPLARMFAWIRALR"
BASE COUNT          601 a         1504 c         1474 g          499 t
ORIGIN      
        1 cgcccggagc tctgcccgtc gctcaccgtc atggacaacg tggcgctcgg ctgcgaggcg
       61 ctggccgccg gcgggaacct gtggcgccag atcgtccccc gccgccgcga caccgcccgc
      121 ctccgggagc aggcggcccg ggcgctggcc gaatgcggca tcgccgagtt ggccggcacc
      181 cccgtcgccg tcctcagcgt cggccagcgg cggttggtgg agctggcccg ggtggcggcc
      241 ggaggctacc ggctgctgct gctcgacgag ccgtcgtcgg gtctcgaccc ggccgagacg
      301 gcccggttcg gcgcgatcgt gcggcacctg gtggaggacg ccggcgtcgg cgtcctgctg
      361 gtcgagcacg acatgagcct ggtgatggag gtgtgcgact tcctctacac gctcgacttc
      421 gggcggctga tcttcgccgg cccgccggcc gagacgcggg ccagcgccgc cgtccgggcc
      481 gcctatctcg gcgacgacga cgccgccctg tcggcgcggg agcggtaggc ggccgccgat
      541 gctgcgcctc gacgggatcc gggccggcta cgggcaggcg accgtgctgc gcgacgtgtc
      601 ggtcgtggtg cccgacggcg ccgccgtggc cctcctcggc cccaacggcg ccggcaagac
      661 gacgctgctg cgggtcgcct cgggcctgct gcggcccttc gccggccggg tcgtcctcga
      721 cggcgaggac gtcaccgccg ccccgccgca gcgccgccgg cggctcggcc tgtgccacgt
      781 ccccgagcgg ggcggcgtct tcgccgatct caccgtggcc gagaacctcc gcctcttcgc
      841 ccctcccggc cacgaggacg aggccgtcga ccgggccgtc gccgccttcc cggcgctcgg
      901 ctcccggctc ggccagccgg ccgggacgct ctccggcggc gagcagcaga tggtggccct
      961 cagccgggtc cacggcgagc gctcccgggt cgtgctgctc gacgaggtct cgatgggcct
     1021 ggccccgagg ctggtggaca cgatcttcgc cttcctcgaa ggcctggcgg cgagcggcgt
     1081 ctcgctcctc gtcgtcgagc agtacgtggc caaggcgctg gccatcgccg actacgtctg
     1141 cctcctcgac cggggccgta cgtccttcgt cggcgagccg ggcgagctcg acagcgccgg
     1201 cctcgccgcc cgctacctcg gcggggcgca ggcctgaacg gcctcccggg caccgcgccg
     1261 acgacttgta cgccgagccg gcaatcccga tcggcctcac aaccagcgtt cctgaggaac
     1321 gacaggtgtt ccccaggaac gccgaatcgg tctgccgccc ggccggacgg caaccggcgt
     1381 tcttcaggaa cgacaggtgt tcctcaggga cgccggccgt ccgatcgcac cgaggttccg
     1441 tccatgctcg cagggcgctg gcgaagaccc ttcgagcctc ggagcgtctc gcctaccggt
     1501 cagtcggagc gcagcgccgg gaccaggtag gcggagagca cgtcgcggca ctcgtcggcg
     1561 gcgtacccga agacgtcgcc gctgctgatc agcgagaact cgaggaacgt gatccagcgg
     1621 atgatgtcgt cgaagtcgcg gtcggtgcgg agctcgcccc ggtcccgggc cgcctccagc
     1681 agcgggtacc acagctcccg ctggaggccc atgacgatgt ccgactcggc caggcgggcg
     1741 gtgaggccgg cggtgtccgg ctgggtcagc aggcggatgt actggttctc ccccgagagc
     1801 cggatcgtgg tgagcgacgc ctcgatcatg gccggcagcc cgtcttccag ccggatgcgc
     1861 tgccggatgc ggcggtggat ctcccgcacc tggcggacga tcacctcgag gaccagggcg
     1921 tccttgtcgg ggaagtagta gtagatcgtg gggcgggaga cgccggcttc ccgggcgacg
     1981 tcgtccatca gcgtgcgccg aacgccatgg cgctcgaagg ccgccagcgc cgccttgtag
     2041 atctcctccc gggcgttgcg ccggcggggc gcggccgccg gccgggctgg ttcggcggcg
     2101 gcacgcttcg gcatggttgg atcgtaccgg gtttgcatct gcttacctca gtggcaacat
     2161 aagccacaga caggctggga gcgagcgagg aaccggcatg gcggcgagga accaggggtc
     2221 gaaggcgggc ccggcgcaag cggtgaaggc cacggcggcg acggcggcca agacggccaa
     2281 ggcgacggcc aaggcgacgg ccaagaccgc ggcgaagacc gcccggacgg cggcgaagac
     2341 ggcgaaggtg ccggtggaca cggtggtcaa cgccgcgaag acgatggtgg ccaaggccgc
     2401 cgggaccgcc aaggcgacgg tggccaaggc cgcgccggcg ggcaagccgg cggccaggac
     2461 ggcgaggacg gccgcctcca cggccaagac ggcggcgacg tccgccacgg cggcacccgg
     2521 tcgagcggtg aaggcgacgc gggcggccgg cacgagggcc gccgccgggg cgaagcgggc
     2581 ggcgggtacc gtcggcgccg gccggccggc cgagccggcc cggggccaga tcggcgataa
     2641 cgccgctccg gccgccacca ccgaggcgcc ggccctcgcc acgcccctgc cgggtcggaa
     2701 gtccccggcc gcgaaagcgg gcggaacagc gaaggccccg gcggccaagg ccgggggggc
     2761 gacgaagtca tcggcgaaga agaccggcgg cacagcgaag aagaccggcg agaccgccaa
     2821 gaagaccggc ggaacagcga agaagaccag cggaacggcg aagaagaccg gcgagaccgc
     2881 caaggcctcg tcggcggcca agcccgccgc ccggcgcacg acgacgaaga agagctgagc
     2941 atggacttct cccccagccc ccggtgccag gagctgcacg ctgagctgac gcggttcatg
     3001 gccgagcgcg tctacccggc ggaggacgtc tacgaggagc agatggcggc ctcgggcgat
     3061 ccgcaccacc acgcgccggt catcgaggag ctcaaggtcg aggcccgccg ccgcgggctc
     3121 tggaacctgt tcctgcccca caagaccgaa tggacggacg ggctgtccaa caccgactac
     3181 gccccgctgg ccgaggtcat gggccgctcc cccatcgcct ccgaggtctg caactgctcg
     3241 gctcccgaca ccggcaacat ggagatcctc accatgttcg gcaccgtcga gcagcaggag
     3301 cagtggctgc agccgctcct cgagggcgag atccgctccg ctttcgccat gaccgagccg
     3361 caggtggcct cgtccgacgc caccaacatc gcctgctcca tccggcgcga cggcgacgac
     3421 tacgtcatca acggccgcaa gtggttcatc tccggagcgc tgcaccccca ctgccgcatc
     3481 ctcatcgtga tgggcaagac cgaccccgac gccgcgcccc accggcagca gtcgatggtc
     3541 ctggtgccga tggacacgcc cggcgtcacc atcctgcgca acatgctcgt cttcggctac
     3601 gacgacgccg agggccacgt ggagatgacg ttggaggacg tgcgcgtccc ggtgtccaac
     3661 ctcctcggcg aggagggcgg cggcttcgcc atcgcccagg cccgcctcgg cccgggccgc
     3721 atccaccact gcatgcggac gatcggcgcc gccgaacggg cgctggagct catgtgccgg
     3781 cgggcccacg cccgcagccc cttcggcaag cccctggccg accagggcgt ggtgcagacc
     3841 tgggtggccg acgcccgcat cgccatcgac caggcccgcc tctacacgct ctacaccgcc
     3901 tggctgatgg acaccgccgg caacaaggcc gcccggaccg aggtctccgg gatcaaggtc
     3961 gccgtcccca acatggcgct cgacgtcatc gaccacgcca tgcagaccca cggcgccatg
     4021 ggcgtctcgc aggacacgcc gctggcccgg atgttcgcct ggatccgggc cctgcgct
//
LOCUS       DATGJT010000639         2390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1535676, whole genome shotgun sequence.
ACCESSION   DATGJT010000639 DATGJT010000000
VERSION     DATGJT010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1535676"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VKX24_11060"
     CDS             complement(<1..617)
                     /locus_tag="VKX24_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013874431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase beta-grasp
                     domain-containing protein"
                     /protein_id="HLJ09071.1"
                     /translation="MAYQAEYIWIDGTEPSPLLRSKTKIVATGKKPGIWGFDGSSTNQ
                     ATGAASDCVLQPAYVCPDPLRGDDNVLVMCEVLNVDMSPHPTNTRHACVETSERFKSH
                     EAWFGFEQEYTFLQNGRPLGWPSTGYPAPQGPYYCGVGGDKMPGREIVERHTAALLRA
                     GLGIEGTNAEVMMAQWEFQIGILGAPAIGDQLWMARWLLFRIAED"
     gene            complement(873..1859)
                     /locus_tag="VKX24_11065"
     CDS             complement(873..1859)
                     /locus_tag="VKX24_11065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09072.1"
                     /translation="MPSDRTFVTELATGLGMFGDDDPDTVLVRRPQEFVNLSPEDWDR
                     LAELWGSGRYGAEFVQGFMNGRAFLAAPDALNGRRPRIVEWTGGRRPPGDEVVPSDLR
                     VDHVYLVSCKYLSGILHNPSPARLVEGLLAQGPVDDARDWYERVAPVEYQELYEACAE
                     GSPRYPGVPAELSTAQRRALADELAGGWPAGAAECYERLCKVVAEHTAEAWRGAIARA
                     NPEAVAWRLLRIGSAPYFVLGTNRRAAMRLRIDTPWDWRQRYRLRRIDVGAQAGGQPR
                     VAWSVVYEGDGGERAVRGHVEIRWSHGRFAQAPEAKVYLDTPHDQVPGYHPL"
     gene            complement(1859..>2390)
                     /locus_tag="VKX24_11070"
     CDS             complement(1859..>2390)
                     /locus_tag="VKX24_11070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09073.1"
                     /translation="RERIRAETARRPPAGRARGTAAAAAATDDRFAKGLADGLLAKEM
                     AALLVELCGFADVRADVKLPGLGVELHLVAADRAGHEWAFEVVGALTNNRTGLKRADA
                     LWRALGRAAVVHEGRPDLPFVLITTDRPGRGSAGRRALEAVSGPGRPVFDTIELFDAA
                     DRDRLTGHARQGAPAP"
BASE COUNT          302 a          886 c          878 g          324 t
ORIGIN      
        1 aagtcctcag cgatccggaa caggagccac cgcgccatcc acagctggtc gccgatcgca
       61 ggggcgccga ggatgccgat ctggaactcc cactgggcca tcatcacctc ggcgttggtg
      121 ccctcgatgc cgaggccggc gcgcagcagg gcggcggtgt ggcgctcgac gatctcccgg
      181 ccgggcatct tgtccccgcc gaccccgcag tagtacgggc cctgcggcgc cgggtacccg
      241 gtcgacggcc agccgagcgg ccggccgttc tgcaggaagg tgtactcctg ctcgaagccg
      301 aaccacgcct cgtgcgactt gaacctctcg gacgtctcga cacaggcgtg ccgggtgttg
      361 gtcgggtgcg gagacatgtc gacgttcagg acctcgcaca tcacgagcac gttgtcgtcg
      421 ccccgcaacg ggtccgggca cacgtaggcc ggctgcagca cgcagtccga ggccgccccg
      481 gtcgcctggt tggtgctcga cccgtcgaag ccccagatgc cgggcttctt gccggtggcg
      541 acgatcttgg tcttgctccg gaggagcggg gacggctcgg tcccgtcaat ccagatgtat
      601 tccgcctggt aggccatgtc ggacgttcct ttgctctcga gcccatgggc aggaccgcgt
      661 tcgctgcctg ggactattgc acccccccgg ggtcgccgtg acctcggttc ggtgaacggt
      721 ctgtgaacct tgcctccgga gccggggcgg ggtcgaccgg gtgcctgcgc cgggccgagc
      781 ccggctcggc caccaggcag ccggccttgg aaaacggcca aagaggctct gggcgaaggc
      841 gagcgtctct gggcccgacc gccggccccc cttcagagcg ggtggtaccc ggggacctgg
      901 tcgtggggcg tgtcgaggta caccttggcc tcgggagcct gggcgaagcg cccgtggctc
      961 caccggatct cgacgtggcc gcgcacggcc cgctccccgc cgtcgccctc gtagacgacg
     1021 gaccaggcga cgcggggctg gcccccggcc tgggccccga cgtcgatccg gcgcagccgg
     1081 tagcgctggc gccagtccca gggggtgtcg atccgcagcc gcatcgcggc ccgccggttg
     1141 gtgccgagca cgaaatacgg cgccgagccg atccgcagca gccgccaggc gaccgcctcg
     1201 gggttggccc gggcgatggc gccccgccac gcctcggcgg tgtgctcggc caccaccttg
     1261 cacagccgct cgtagcactc tgcggccccg gcgggccacc cgccggcgag ctcgtcggcc
     1321 agcgcccggc gctgcgccgt ggacaactcg gccgggacgc cgggatagcg cgggctcccc
     1381 tcggcacagg cctcgtagag ctcctggtac tcgaccggcg cgacccgctc gtaccagtcg
     1441 cgggcgtcgt ccaccggccc ctgggcgagc aggccctcga cgaggcgggc ggggctcggg
     1501 ttgtgcagga tgccggagag gtacttgcag ctcacgaggt agacgtggtc cacccggagg
     1561 tcggagggga cgacctcgtc gccggggggg cgccggccgc cggtccactc cacgatccgc
     1621 ggccgccggc cgttcagggc gtcgggcgcg gcgaggaagg cccggccgtt catgaacccc
     1681 tggacgaact cggcgccgta gcggccgctc ccccacagct ccgccagccg gtcccagtcc
     1741 tccggcgaca ggttcacgaa ctcctgcggg cgccgaacga gcacggtgtc ggggtcgtcg
     1801 tcgccgaaca tcccgagacc ggtggcgagc tccgtgacga aggtccggtc cgagggcatt
     1861 agggcgcggg tgccccctgg cgcgcgtgcc cggtgagccg gtcgcggtcg gcggcgtcga
     1921 agagctcgat cgtgtcgaag acgggacggc ccggcccgct gacggcctcg agggcgcggc
     1981 ggcccgcgct gcccctcccc ggccggtcgg tcgtgatgag gacgaagggc aggtcgggac
     2041 ggccctcgtg gacgacggcg gcccgcccga gcgcccgcca gagggcgtcg gcccgcttca
     2101 gcccggtccg gttgttggtc agcgccccga ccacctcgaa cgcccactcg tgcccggcgc
     2161 ggtcggcagc gacgaggtgg agctcgacgc cgaggccggg cagcttgacg tcggcgcgga
     2221 cgtcggcgaa accgcagagc tcgacgagga gcgccgccat ctccttggcc agcagcccgt
     2281 cggcgagccc cttcgcgaac cggtcgtcgg tggcggccgc cgccgccgcc gtgccccgtg
     2341 ccctcccggc cgggggccgg cgcgccgtct ccgccctgat gcgctccctc
//
LOCUS       DATGJT010000640         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_815447, whole genome shotgun sequence.
ACCESSION   DATGJT010000640 DATGJT010000000
VERSION     DATGJT010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_815447"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2379
                     /locus_tag="VKX24_11075"
     CDS             <1..>2379
                     /locus_tag="VKX24_11075"
                     /EC_number="4.1.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016188245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit"
                     /protein_id="HLJ09074.1"
                     /translation="VPAKLLEVNRQILNNQLARTTGAKVSFTHLIGYAVVRALVEIPA
                     LNASFVPDVDGKGTPGVLRHAHVGLGLAVDVARDDGSRTLLVPCVKDADTLDFRSFVL
                     AYEELIRKVHTNRVTPDDFAGTTVSLTNPGTLGTVQSVPRLMPGQGAIIGVGALGYPA
                     GFEAADPKVLAEIGIGKVVTLTSTYDHRIIQGAESGLFLSKVEGLLEGKDRFYDAVFE
                     SMGIPYEPARWRTDRSAGLTMGDATEERMVKQVHVQTLINMYRVRGHLIANLDPLEVE
                     PSRWHPELDPLTYDLTIWDLTREFVVVGLAGRETATLESILGILRDAYCRTLGIEYMH
                     IADPVQKRWIQEHVEGVSQALDVDKQRHVLDRLNAAEAFERFLHTRYVGQKRFGLEGA
                     ESTMVLLDTLLDEAADAGCSEVVLGMAHRGRLNVLANLVGKSYREIFEEFEGNLDPES
                     VQGSGDVKYHKGAVGKFVSRSGEPLAITMSSNPSHLEAVDPVVEGMARAKQDRIVSQQ
                     TDGTSGTADPEGHFPVLALLVHGDAAFAGQGVVAETLNLSGLVGYRTGGTVHVVINNQ
                     LGFTTAPAAARTSVYPTDVAKMVQAPILHVNGDDPEACVRAARLAFGFRQEFHKDVVI
                     DLVCYRRYGHNEGDDPSYTQPLMYKRIDAKRSVRKLYTEALVRRGDLTLEEAERALDD
                     FNARLQSALDEVRAEPVRPAELVSPEPRDLPAPVETRVPVEQLRALAQLVRSVPEGFT
                     LHPKLARQFDQRDRLVEAGTVDWALAEALAMGTLLAQGVDVRLSGQDTRRGTF"
BASE COUNT          359 a          904 c          792 g          324 t
ORIGIN      
        1 gtcccggcca agctgctcga ggtcaaccgc cagatcctga acaaccagct ggcccggacc
       61 acgggggcga aggtcagctt cacccacctc atcgggtacg cggtcgtccg cgccctggtc
      121 gagatccccg cgctcaacgc cagcttcgtc cccgacgtcg acgggaaggg cacccccggc
      181 gtcctccgcc acgctcacgt gggcctcggc ctggccgtcg acgtggcccg ggacgacggg
      241 tcgaggacgc tcctcgtccc ctgcgtgaag gacgccgaca ccctcgactt ccggtccttc
      301 gtgctggcct acgaggagct catccgcaag gtccacacca accgggtgac ccccgacgac
      361 ttcgccggca cgacggtgtc gttgaccaac ccggggacgc tcggcaccgt ccagtccgtc
      421 ccccggctca tgcccggcca gggcgccatc atcggggtcg gcgcgctggg ctacccggcc
      481 gggttcgagg ccgccgaccc gaaggtgctg gccgagatcg gcatcggcaa ggtggtgacg
      541 ctcacctcca cctacgacca ccgcatcatc cagggcgcgg agtcgggact gttcctctcg
      601 aaggtggagg gcctcctcga gggcaaggac cgcttctacg acgcggtctt cgagtcgatg
      661 gggatcccct acgagccggc gcggtggcgg acggaccgca gcgccggcct caccatgggc
      721 gacgccaccg aggagcgcat ggtcaagcag gtccacgtcc agaccctcat caacatgtac
      781 cgggtccggg gccacctgat cgccaacctc gacccgctcg aggtcgagcc gtcgcgctgg
      841 caccccgagc tcgacccgct cacctacgac ctcaccatct gggacctgac gcgagagttc
      901 gtggtcgtcg ggctcgccgg ccgggagacg gcgacgctcg agtcgatcct cggcatcctg
      961 cgcgacgcct actgccgcac gctcggcatc gagtacatgc acatcgccga cccggtccag
     1021 aagcgctgga tccaggagca cgtggagggc gtgtcccagg cgctcgacgt cgacaagcag
     1081 cgccacgtcc tcgaccgcct gaacgcggcc gaggcgttcg agcgcttcct gcacacgcgc
     1141 tatgtcggcc agaagcgctt cgggctcgag ggggccgagt cgaccatggt gctcctcgac
     1201 acgctgctcg acgaggccgc cgacgccggg tgctccgagg tcgtgctcgg gatggcccac
     1261 cgcggccggc tgaacgtcct cgccaacctg gtcggcaagt cctaccggga gatcttcgag
     1321 gagttcgagg gcaacctcga ccccgagtcc gtccagggct cgggcgacgt caagtaccac
     1381 aagggggcgg tcgggaagtt cgtctcccgc tccggggagc cgctcgccat caccatgtcg
     1441 tccaacccct cgcacctgga ggcggtcgac ccggtggtcg aggggatggc ccgggccaag
     1501 caggaccgga tcgtctccca gcagaccgac gggacctcgg gcacggccga ccccgagggc
     1561 cacttcccgg tcctggcgct gctcgtgcac ggcgacgccg ccttcgccgg gcagggcgtc
     1621 gtcgccgaga ccctgaacct ctccgggctg gtggggtacc ggaccggcgg cacggtgcac
     1681 gtggtgatca acaaccagct cgggttcacg acggcccccg ccgccgcccg gacctcggtg
     1741 tacccgacgg acgtggccaa gatggtccag gcgccgatcc tgcacgtgaa cggggacgac
     1801 ccggaggcct gcgtgcgggc ggcccggctc gccttcgggt tccgccagga gttccacaag
     1861 gacgtggtca tcgacctcgt ctgctaccgg cgctacggcc acaacgaggg cgacgacccg
     1921 agctacaccc agccgctcat gtacaagcgg atcgacgcca agcgctcggt ccgcaagctc
     1981 tacaccgagg cgctcgtccg gcggggcgac ctcaccctgg aggaggccga gcgggccctc
     2041 gacgacttca acgcccgcct gcagtcggcg ctcgacgagg tccgggccga gcccgtccgg
     2101 ccggccgagc tcgtctcgcc cgagccccgc gacctgccgg ccccggtcga gacccgggtc
     2161 ccagtcgagc agctgcgggc cctcgcccag ctcgtccgct ccgtccccga gggcttcacc
     2221 ctgcatccca agctggcccg ccagttcgac cagcgcgacc ggctggtcga ggccggcacc
     2281 gtcgactggg ccctcgccga ggccctcgcc atgggcaccc tgctggccca gggggtcgac
     2341 gtccgcctgt cgggccagga cacccgccgg gggaccttc
//
LOCUS       DATGJT010000641         2662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_815676, whole genome shotgun sequence.
ACCESSION   DATGJT010000641 DATGJT010000000
VERSION     DATGJT010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_815676"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VKX24_11080"
     CDS             <1..224
                     /locus_tag="VKX24_11080"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the reversible formation of
                     diaminobutyrate and 2-oxoglutarate from glutamate and
                     L-aspartic beta-semialdehyde; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HLJ09075.1"
                     /translation="VTGSGFLWGLTFEDGRAAAGVLAAAFRAGLILEACGTGDRTVKL
                     LPPLVIGDDDLDDGLDRLSRSVRALAEGY"
     gene            complement(247..1200)
                     /locus_tag="VKX24_11085"
     CDS             complement(247..1200)
                     /locus_tag="VKX24_11085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020514141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ09076.1"
                     /translation="MAEHRIAFALQAAPRSMAEWTDLARRAESGGFDALCVADHPGTT
                     KSPFVSLAAAAAVTERIQLGTAVVNGGVCEPMTLAADVATLDLLSGGRAYLGLGAGHT
                     PAEWEMVGRRYPSPAERVDRFGELLATVPALVAGDTVTFSGAHLQLDGARLAFSTGRR
                     VPLLVGGSNPRLLRLGAEQADMVEVSGTGRTLADGHSHEARWSPSDVARSTDLVRAAA
                     ARAGRHVVLGALVQFAELTDDPEGWMAARLGRAGDAVPPEHLPSVADALASPYAMVGS
                     LDDVVAKIDQGAARWGLTRYTLRSVEVGAQVIAARRAAEAR"
     gene            1413..2042
                     /locus_tag="VKX24_11090"
     CDS             1413..2042
                     /locus_tag="VKX24_11090"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ09077.1"
                     /translation="MPPRPGHGTTGLGIDTYPPFLDIARARAVELGVGDRVSFEAADA
                     AAFDPGRGPFDVVSCIGATWIGGGLGGTLELLRRSLAPGGWVLVGEVFWAEEPPATLR
                     AAEEHSQRFFDLPGTLDVVERAGFELVEMVLASNDDWDRYSARQWLAVREWVDAHPGD
                     PQGPELTRLTDESRRTYLSHLRRCMGWGVFVLKEGAPSSSERRPPGGRG"
     gene            complement(2086..2571)
                     /locus_tag="VKX24_11095"
     CDS             complement(2086..2571)
                     /locus_tag="VKX24_11095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006545922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HLJ09078.1"
                     /translation="MTSGKHRKRLARRRAARTGEPYTAALLYISTRKEGLVPDPETPS
                     ATTFIACCSFCGKDNTALEKLIAGPGVFICNECVGLCDQILATTTDEEGREIRTAYEN
                     RSAEEILEGLAPIVRNADAVEAHLRGLVERVRAQGTPWSDIAARAGIGEDAARARFER
                     S"
BASE COUNT          334 a          977 c         1004 g          347 t
ORIGIN      
        1 cggtcaccgg ctcggggttc ctgtggggcc tcaccttcga ggacgggagg gccgccgccg
       61 gcgtgctcgc ggccgcgttc cgggccggcc tcatcttgga ggcctgcggg acgggggacc
      121 ggacggtgaa gctcctcccc ccgttggtga tcggcgacga cgacctggac gacggcctcg
      181 accggctgtc ccggtcggtc cgggcgctcg ccgaggggta ctgaccgcac cggcctgccg
      241 gtcggctcag cgcgcctccg ccgctcgtcg ggccgcgatg acctgagcgc cgacctcgac
      301 cgagcggagc gtgtaccggg tgaggcccca ccgcgccgca ccctggtcga tcttggccac
      361 gacgtcgtcc agcgaaccga ccatcgcata cggcgaggcc agggcgtcgg cgaccgaggg
      421 caggtgctcc ggcgggaccg catcgccggc gcgtcccagg cgggcggcca tccagccctc
      481 ggggtcgtcg gtcaactcgg cgaactggac gagcgcgccg aggaccacgt ggcggccggc
      541 ccgggccgcg gcggcgcgga cgaggtcggt cgaccgggcg acgtcgctcg gcgaccagcg
      601 ggcctcatgg gagtggccgt cggccagggt gcggccggtg cccgagacct cgaccatgtc
      661 ggcctgctcg gccccgaggc gcagcagccg ggggttggac ccgccgacca gcagcgggac
      721 gcggcggccg gtcgagaagg cgaggcgcgc cccgtccagc tgcaggtgcg cgccggagaa
      781 ggtgacggtg tccccggcca cgagggcggg gaccgtcgcc aggagctcac cgaaccggtc
      841 cacgcgctcg gcgggcgacg ggtagcggcg gccgaccatc tcccactcgg ccggcgtgtg
      901 cccggcgccg agcccgaggt aggcgcgccc gccggagagc agatcgaggg tggccacatc
      961 ggcggccaac gtcatcggct cgcacacgcc gccgttcacg accgcggtcc cgagctggat
     1021 ccgctcggtg acggcggcgg ccgcagcgag cgagacgaag ggcgacttcg tggtcccggg
     1081 atgatcggcg acgcacaggg cgtcgaaccc gcccgactcc gccctgcggg cgaggtcggt
     1141 ccactcggcc atggaccggg gcgcggcctg gagggcgaag gcgatccggt gctcggccat
     1201 gtgcaacgtt ggcacagccc gcgggcctga ccgccggcgc atcccgagag gaccaccgtg
     1261 gtttcgccca accgctatca cgagatctcc gagtccggga cgaggatcct caacccgctg
     1321 gcggagcaca agctcctcct gctcggggag atctgccggc cggccgccgg ttcgtcgcac
     1381 ctcgacctcg cctgtggcaa gggcgagctg gtgtgccgcc tcgcccaggc cacgggacca
     1441 ccggcctcgg catcgacacc tatcccccgt tcctcgacat cgcccgggcc cgtgccgtcg
     1501 agctcggcgt gggcgaccgg gtcagcttcg aggcggccga cgccgccgcg ttcgaccccg
     1561 ggcgcggccc gttcgacgtc gtgagctgca tcggcgccac ctggatcggc ggcgggctcg
     1621 gcggcaccct ggagctgctc cgccggtcgc tggccccggg cggttgggtc ctcgtgggcg
     1681 aggtgttctg ggccgaggag cccccggcaa cgctccgcgc cgccgaggag cactcgcagc
     1741 ggttcttcga cctgcccggc acgctcgacg tcgtagagcg ggcgggcttc gagctggtcg
     1801 agatggtcct cgccagcaac gacgactggg accggtactc ggcccgacag tggctggcgg
     1861 tccgggagtg ggtcgacgcc caccccggcg acccccaagg ccccgagctc acccggctca
     1921 ccgacgagag ccggcgcacc tacctctcgc acctgcgccg gtgcatgggc tggggcgtgt
     1981 tcgtcctgaa ggagggggcg ccgtcgtcct cggagcggcg gccccccggg ggcaggggct
     2041 agggcccggg gccctcgccc ctgcccggtt ccgggcggag cggggtcagg accgctcgaa
     2101 gcgggccctg gccgcgtcct cgccgatgcc ggcgcgcgcc gcgatgtccg accacggcgt
     2161 gccctgcgcc cggacccgct cgacgagtcc ccggagatgg gcctcgaccg cgtccgcgtt
     2221 gcggacgatc ggcgcgagcc cctccaggat ctcctcggcg gagcggttct cgtaggcggt
     2281 gcggatctcc cggccctcct cgtcggtggt ggtggccagg atctggtcac acagtccgac
     2341 gcactcgttg cagatgaaga cgccgggacc ggcgatgagc ttctccagag cggtgttgtc
     2401 cttgccgcag aacgagcagc aggcgatgaa tgtggtggcg cttggtgtct ccggatcggg
     2461 cacgaggccc tcctttcggg tgctgatgta caggagggcg gcggtgtagg gctcgcccgt
     2521 gcgcgccgcc cgtcgacggg ccaggcgttt gcggtgcttc cccgacgtca tccgacctcc
     2581 gtgcgaccga cgggggcccc agcgacccca ccggacgcga ctgacggacg acccgaggac
     2641 atgatcccct tcgcctccac gg
//
LOCUS       DATGJT010000642         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1437424, whole genome shotgun sequence.
ACCESSION   DATGJT010000642 DATGJT010000000
VERSION     DATGJT010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1437424"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VKX24_11100"
     CDS             <1..649
                     /locus_tag="VKX24_11100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012239777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HLJ09079.1"
                     /translation="INALWYQALCLLEEWSAKEGFDVAVDVAALRDTVSESFNRRFWY
                     EAGSYLYDVVDREGGGDDPTLRPNQVLAVSLPRAVLRPDRWAPVVETVRRHLLTPVGL
                     RTLDPEHPDYKPRYDGDLRARDGAYHQGTVWPWLLGPFVDAWLKAFPERTDEARAMVG
                     RLHDHLGQAGIGSVSEIFDAEEPFTPRGCIAQAWSVAELIRATASIGAPGDCSAL"
     gene            770..1231
                     /locus_tag="VKX24_11105"
     CDS             770..1231
                     /locus_tag="VKX24_11105"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ09080.1"
                     /translation="MGDVRVVAVDPRGDRRQVMRRLLEHSFQPEELAEADGLTSAIEV
                     VGRCRPDAVVLEIQMPLEVGLDTIDRLGRMSPRPRIVVCSFRHDAATVAAALDRGADA
                     YVAKPAGAAELRAALAVTAERPVRHRPPNERPVSPSPLRDPEPDVEIKATP"
     gene            1410..1745
                     /locus_tag="VKX24_11110"
     CDS             1410..1745
                     /locus_tag="VKX24_11110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09081.1"
                     /translation="MTSQRALRPVERVVLRLVHEGVDDTEIARRFRRSPEMIRRITAL
                     ARVPRTAGAKVVPHDGLRPLERRLLRWRHYGATYAEIGCRFRRSPAFVARVEAFAHYK
                     LEGRPAIES"
BASE COUNT          313 a          796 c          738 g          327 t
ORIGIN      
        1 gatcaacgcc ctgtggtatc aggccctgtg cctcctcgag gaatggtcgg ccaaggaggg
       61 cttcgacgtc gccgtcgacg tcgccgccct gcgcgacacg gtgagcgagt cgttcaatcg
      121 gcgcttctgg tacgaggccg gttcgtacct ctacgacgtg gtggaccgcg agggcggtgg
      181 cgacgacccc accctgcggc cgaaccaggt gctggccgtg tcgctgcccc gggcggtcct
      241 gcggcccgac cggtgggccc cggtggtgga gaccgtgcgc cgtcacctcc tcacgccggt
      301 cgggctccgg acgctcgacc ccgagcatcc cgactacaag ccccgatacg acggcgacct
      361 gcgggcccgg gacggcgcct accaccaggg cacggtatgg ccatggctcc tcgggccgtt
      421 cgtcgacgcc tggctcaagg cctttccgga gcgcaccgac gaggcccggg ccatggtcgg
      481 ccgcctccac gatcatctgg ggcaggccgg catcggctcc gtgagcgaga tcttcgacgc
      541 cgaggagccc tttacgcccc ggggatgcat cgcccaggcc tggagcgtgg ccgagctgat
      601 ccgggccacg gcgtcgatcg gagcccccgg agactgttcg gccctttgac cgatggtgtt
      661 acgctgcgaa gcaggcgctg ctcgagaccc cggttgcgca tccaatgcgt cggatgccca
      721 ggaaggccga gcaatgcaag aagctcacga tgtacacggc gacggggacg tgggcgacgt
      781 acgcgttgtc gccgtcgacc cccggggcga ccgtcggcag gtgatgcgcc ggctgttgga
      841 gcactccttc cagccggagg agctcgccga ggcggacggc ctgacgtcgg ccatcgaggt
      901 cgtgggccgg tgccgtcctg atgccgtcgt cctcgagatc cagatgcccc tcgaggtcgg
      961 cctcgacacc atcgatcgcc tcggccggat gtcgccccgg ccgcggatcg tcgtctgctc
     1021 gttccgccac gacgccgcca ccgtggcggc cgccctcgat cgaggggccg acgcctacgt
     1081 ggcgaagccc gccggagcgg ccgagctccg tgcggcactg gcggtgaccg ccgagcgccc
     1141 cgtccgccat cgaccgccga acgagcgccc cgtgtcgcca tccccgctcc gcgatccgga
     1201 accggacgtc gagatcaagg cgaccccgtg agagagttcc ccgagtgccc ccgctgcagc
     1261 gagcttctcg tcggggccag cacgccccgg ggcggcgcag cccgcaaccg accgttcccc
     1321 gatcgttcga ccggttattg cgccaactgc cacatcggcc tgaccaagat ccacggtgtc
     1381 tgggcgccgt ctccgaccgg aacgtcgtca tgacgtcgca gcgggccctg cgaccggtcg
     1441 agcgcgtggt gctgcgcctc gtccacgaag gcgtcgacga cacggagatc gcccggcgct
     1501 tccgccgcag cccggagatg atccgacgga tcacggccct ggcccgggtt ccccggaccg
     1561 ccggtgccaa ggtcgtcccg cacgacgggt tgcggccact cgagcgacga ctgctccgct
     1621 ggcggcacta cggcgccacc tacgctgaga tcgggtgccg gttccgccgg agcccagcct
     1681 tcgtggcgcg ggtggaggcc ttcgcccact acaagctcga ggggcgaccg gcgattgaga
     1741 gctgagcctg cagcggacgg ggtcatcgag cgagcgctcc gcctcgacgc gggaggttca
     1801 ccggactcgg ttgacgacct cgtcgttttg gccgaaggac gtcgtgcgcc actcgaggcg
     1861 gctgcttccc ttctgatcgc acggctccat cgccgatccg acgatttcgc cgccacccgg
     1921 gcgctgtcct cggtcagcgc agcgctgagt cgcatcggat gggagatgcc ctccctaccg
     1981 gagcgccgcc gctggaccgg gcgtcgggtc tgacgtcgcc ggtcaccatg atcacaccac
     2041 aaccgttacc ctgaaccgga ttacgccccc taccggcaaa cgaggacgtt cctgtgccca
     2101 acacccttat cagcgggtcg tcgacccgcg ccctcgaagt ggctgctgca ctgcaagacg
     2161 gcgattggcc ggcg
//
LOCUS       DATGJT010000643         3432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_917993, whole genome shotgun sequence.
ACCESSION   DATGJT010000643 DATGJT010000000
VERSION     DATGJT010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3432
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_917993"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VKX24_11115"
     CDS             <1..220
                     /locus_tag="VKX24_11115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09082.1"
                     /translation="KRTVAERLGGRGGRGGRGGPGGPRGPREEQVEAAAAEEAAVESV
                     DTEAEGLDEVEIGDAAAFSDGAADEDEG"
     gene            192..2210
                     /gene="thrS"
                     /locus_tag="VKX24_11120"
     CDS             192..2210
                     /gene="thrS"
                     /locus_tag="VKX24_11120"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HLJ09083.1"
                     /translation="MAPPTKTRADPAKVPDQVTVKLPDGSTRQYAAGVTPAEIAASIG
                     RRLADAAVAASVDGATVDLDRPIAADAEVAILTADSPEGLYVVRHSTAHVLAQAVLDL
                     FPGARYAIGPPIADGFYYDFELPAHPDGTPAHFTEADLERIDARMREIIGEAQPFVRE
                     EMDKAAGLELFADQPFKREIIEGAESTEGAEAGVVSVYRNPHPSDGDGFVDLCRGPHV
                     PHTKRLGAFKLMKVAGAYWRGDEKRPMLQRIYGTAWPSKKELDEHLHRLAEAERRDHR
                     KLGVELDLISFPDELGGGLAVWHPKGAMVRKQMEDFSRAEHEAAGYEFVFTPHLTKGT
                     LFETSGHLDFYADGMYPPMEMEGAKYYPKPMNCPFHCLIFRTRTRSYRELPLRLFEFG
                     TVYRYERSGVLHGLLRTRGFTQDDSHIYVAPEQIVPELTSLLAFVLKVLRTFGFERFE
                     AELSTRPEGKSVGSDENWERATEALHEALRQAGLPYTVAEGEGAFYGPKIDVHLHDAI
                     GRRWQLSTLQVDFNHPIRFDLTYVGEDNERHRPIMIHRALFGSVERFFGILVEHYAGA
                     FPTWLAPVQVLVLPVADRHDGYAAEVAETLRRQGFRVETTDATHDTLGARVRRGKLEK
                     IPYLLVVGDTDVESRTVGVNLRGGDRPERDVALDDFVARLAAEVAARS"
     gene            2224..2712
                     /locus_tag="VKX24_11125"
     CDS             2224..2712
                     /locus_tag="VKX24_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015719515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HLJ09084.1"
                     /translation="MDRLWAGWRSDYISGIAHGEDGCLFCTLLAGEDEESLILERTPL
                     SFTVLNAFPYTSGHLMVAPVRHESELNGLSAEEGAALFAGLQRATRALRDVSHPDGFN
                     AGANLGREAGAGVPGHLHFHVVPRWGGDTNFMTTLAEVRVIPEDLRTTWKKLRAAWPP
                     LP"
     gene            2673..3227
                     /locus_tag="VKX24_11130"
     CDS             2673..3227
                     /locus_tag="VKX24_11130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09085.1"
                     /translation="MEEAPGRLAAAPMTDDAPTPRGPDELPEELDITVARPYKVPDNR
                     KRRVAAGCYVVVALACGAGAVTSGNGGLLAAAVFLALAAAYHLAAAWPLHLDETAALA
                     ASAANVGFPVGHASAQLAWRGLRSRPVWRVLLYSADEPPSKRGLVELDAVDGEVLGSY
                     TEDNPEDWSAYGFSPRSSGGTASS"
BASE COUNT          487 a         1266 c         1230 g          449 t
ORIGIN      
        1 caagcggacg gtggcggagc ggctcggcgg gcggggcggc cgcggtggcc ggggcgggcc
       61 cggtggcccc cgcggccccc gcgaggagca ggtcgaggcc gccgccgccg aagaagcggc
      121 ggtcgagtcc gtcgacaccg aggccgaagg cctcgacgag gtcgagatcg gcgacgccgc
      181 cgcattttcc gatggcgccg ccgacgaaga cgagggctga tcccgccaag gtgcccgacc
      241 aggtcaccgt caagctcccc gacgggtcga cccggcagta cgccgcgggg gtgaccccgg
      301 ccgagatcgc cgcctcgatc gggcggcggc tggccgacgc cgccgtcgcc gcctcggtcg
      361 acggcgccac cgtcgacctc gaccgcccga tcgccgccga cgccgaggtg gcgatcctca
      421 ccgccgattc gcccgaaggg ctctacgtgg tgcggcactc caccgcccac gtcctggccc
      481 aggccgtcct cgacctgttc ccgggggccc gttacgccat cgggccgccc atcgccgacg
      541 ggttctatta cgacttcgag ctacccgccc accctgatgg aacaccggcg cacttcaccg
      601 aggccgacct ggagcggatc gacgcccgca tgcgggagat catcggggag gcgcagccct
      661 tcgtccggga ggagatggac aaggccgccg gtctagagct ctttgccgac cagccgttca
      721 agcgggagat catcgagggc gcggagagca ccgagggcgc cgaggccggc gtcgtgtcgg
      781 tctaccgcaa tccccacccg tccgacggcg acgggttcgt cgacctctgc cgggggccgc
      841 acgtgccgca caccaagcgg ctcggggcct tcaagctgat gaaggtggcc ggcgcctact
      901 ggcggggcga cgagaagcgc ccgatgctgc agcggatcta cggcaccgcc tggccgtcga
      961 agaaggagct cgacgagcac ctccaccgcc tggccgaagc cgagcggcgc gaccaccgta
     1021 agctcggcgt ggagctggac ctgatctcgt tccccgacga gctcggcggc gggctggcgg
     1081 tgtggcaccc gaagggcgcc atggtccgca agcagatgga ggacttctcc cgggccgagc
     1141 acgaggccgc cggctacgag ttcgtcttca ccccccacct cacgaagggg acgctgttcg
     1201 agaccagcgg gcacctcgac ttctacgccg acgggatgta ccccccgatg gagatggagg
     1261 gggcgaagta ctacccgaag ccgatgaact gcccgttcca ttgcctgatc ttcagaacac
     1321 gtacccggtc gtaccgggag ctgccgctgc ggctgttcga gttcgggacg gtgtaccgct
     1381 acgagcgctc cggcgtcctc cacggcctgc tccgcacccg gggcttcacc caggacgaca
     1441 gtcacatcta cgtcgctccg gaacagatcg tgcccgagct cacgtcgctg ctggccttcg
     1501 tgctcaaggt gctgcggacg ttcgggttcg agaggttcga ggccgagctg tcgacccggc
     1561 cggagggcaa gtcggtgggc tccgacgaga actgggaacg ggccacggag gcgctgcacg
     1621 aagcgctgcg ccaggccggg ctgccgtaca cggtggccga gggcgaaggc gccttctacg
     1681 gccccaagat cgacgtccac ctccacgacg ccatcggccg gcgctggcag ctctccacgc
     1741 tgcaggtcga cttcaaccac ccgatccgct tcgacctcac ctacgtcggc gaggacaacg
     1801 agcggcaccg gccgatcatg atccaccggg cgctgttcgg atcggtggag cggttcttcg
     1861 gcatcctcgt cgagcactac gccggcgcct tccccacctg gctggcgccg gtgcaggtgc
     1921 tggtgctccc ggtggccgac cggcacgacg ggtatgccgc cgaggtggcg gagacgttgc
     1981 ggcgccaggg gttccgggtc gagacgaccg acgccaccca cgacaccctc ggcgcccggg
     2041 tccgccgggg gaagctggag aagatcccct acctcctggt ggtgggcgac accgacgtcg
     2101 agagccggac ggtcggcgtg aacctccggg gcggggatcg gcccgaacgc gacgtggcgc
     2161 tcgacgactt cgtcgcccga ctggccgccg aggtggcggc ccgctcctga cgtgccctcg
     2221 gggatggacc ggctctgggc cggctggcgg tcggactaca tcagcggcat cgcccacggc
     2281 gaggacggct gcctcttctg cacgctcctg gccggcgagg acgaagagtc gctgatcctg
     2341 gagcggacgc cactcagctt caccgtcctc aacgccttcc cgtacacctc gggtcatctg
     2401 atggtggccc cggtccgcca cgagtcggag ctcaacgggc tgtcggccga ggagggggcg
     2461 gcgctgttcg ccggactgca gcgggcgacg cgggcgctgc gcgacgtcag ccatccggac
     2521 ggcttcaacg ccggagcgaa cctcggccgg gaggccggcg ccggcgtgcc ggggcatctc
     2581 cacttccacg tcgtcccccg ctggggcggc gataccaact tcatgaccac cctggccgag
     2641 gtgcgggtga tccccgagga cctccgcacg acgtggaaga agctccgggc cgcctggccg
     2701 ccgctcccat gaccgacgac gccccgacgc cccgcggccc cgacgagctc cctgaagagc
     2761 tcgacatcac cgtcgcccgg ccctacaagg tgcccgacaa ccgcaagcgg cgcgtcgccg
     2821 ccggctgcta cgtcgtggtc gcgctggcgt gcggggcggg ggcggtgacg tccggcaacg
     2881 gcgggcttct ggccgcggcg gtgttcctgg ccctggcggc cgcctaccac ctggccgccg
     2941 cctggccgct gcacctcgac gagaccgccg ccctggccgc ctcggcggcc aacgtggggt
     3001 tccccgtggg ccatgcctcg gcccagctgg cctggcgggg gctccggagc cgtccggtct
     3061 ggcgcgtcct gctgtactcg gccgacgagc cgccctcgaa gcggggcctc gtcgagctcg
     3121 acgccgtcga cggcgaggtc ctcggcagct acacggaaga caaccccgag gactggtcgg
     3181 cctacggctt ctcgccccgc tcctccggcg gcaccgcctc ctcctgaccc ggttcccctg
     3241 ggacaggccc gctctcgggc agcagccagg ccgtcgcccc agggggagac ggcggcggcc
     3301 cgggtgcgga cggcggcccg ggtgcggacg gcggccccgg tgcggacggc ggcggcccag
     3361 cggagaaccc cggctcgggc agtggaccgc cggcggcggc ggagcccacg accggccagc
     3421 gggcgccgtg cc
//
LOCUS       DATGJT010000644         2282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1333774, whole genome shotgun sequence.
ACCESSION   DATGJT010000644 DATGJT010000000
VERSION     DATGJT010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333774"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="VKX24_11135"
     CDS             <1..907
                     /locus_tag="VKX24_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020555682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ09086.1"
                     /translation="AGKTTAIRILSTILAPDTGTATVLGFDIAKSPDDVRLRIGLAGQ
                     FAAIDPNLTGRENLWMTGRLAQLTGKDASARAVQLLERFDLVEAADRPVRTYSGGMRR
                     RLDVAASLVARPPVVYLDEPTTGLDLHSRNGLWDTIRELVAEGTTVLLTTQYLEEADQ
                     LASRLAVIDGGLVIANDTPTALKHALGNTVIEMGIGSEDRAMRAQGVLAGVLPSAPDR
                     EGSVVRINSDEGARILIDALRELESAGLVPATLTVREPSLDDVFLVLTGHRAEEAPAG
                     AAGNGAANGAANGKGRRGRRRGGQA"
     gene            904..1740
                     /locus_tag="VKX24_11140"
     CDS             904..1740
                     /locus_tag="VKX24_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004921166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ09087.1"
                     /translation="MSIDTTTEVPTIPASDHPVPHPQPLRPLRDAATVAVRNLIAYIR
                     VPQLLVFSTVQPVIFVLLFRYVFGGAVKLPPTVRYPYVDFLMPGIFVQTTVFGSIATA
                     VGLATDIKSGLLERFRSLPMARSALLAGRTTADLARNVVVVILMLVVGFAVGFRIQTN
                     VVALLAALGLVLLFGYTMSWVFATVGLAVGDPETAQAAAFPVMAPLVFASSAFIPVST
                     MPTWLQGFATHQPVSVTASAVRALVDGGATTSSVVQCLAWCIGILVVFAPLAVRRYRR
                     AV"
     gene            complement(1825..>2282)
                     /locus_tag="VKX24_11145"
     CDS             complement(1825..>2282)
                     /locus_tag="VKX24_11145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013118172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HLJ09088.1"
                     /translation="IFTPATKATVGHDENITEAEAAALCPPGTLKVARDYAIGLYKRA
                     SEYARTRGIILADTKFEFGVSIGNGAAGGEVTLADEVLTPDSSRFWPADRWSPGSTPP
                     SLDKQYLRDWLDVQGWDHNPPAPDLPPDVVDRTRAGYLEAYERLTGRTL"
BASE COUNT          298 a          834 c          812 g          338 t
ORIGIN      
        1 cgccgggaag accaccgcca tccggatcct gtcgaccatc ctggccccgg acaccggcac
       61 ggcgaccgtg ctcggcttcg acatcgccaa gtcgccggac gacgtgcgcc tgcgcatcgg
      121 cctcgccggg cagttcgccg ccatcgaccc caacctgacc ggccgcgaga acctgtggat
      181 gaccggccgg ctggcccagc tgaccggcaa ggacgccagc gcccgggcgg tgcagctgct
      241 ggagcggttc gacctggtcg aggccgccga ccggccggtg cgcacctact cgggtggcat
      301 gcggcgccgg ctcgacgtgg cggcctcgct ggtcgcccgg cccccggtcg tttacctcga
      361 cgaaccgacg accggcctgg acctgcacag ccgcaacggg ttgtgggaca cgatccgcga
      421 gctggtcgcc gagggcacga ccgtgctgct gaccacccag tacctggagg aggccgacca
      481 gctggcgtcg cggctggcgg tgatcgacgg gggcctggtg atcgccaatg acacgccgac
      541 cgccctcaaa cacgccttgg gcaacacggt gatcgagatg ggcatcggca gcgaggaccg
      601 tgcgatgcgg gcgcagggcg tcctcgccgg cgtcctgccc agcgccccgg accgggaggg
      661 cagcgtggtg cgcatcaact ccgacgaggg tgcccggatc ctgatcgacg ctctccgcga
      721 actcgagagc gcagggctgg tcccggccac gctgaccgtc cgggagccca gcctcgacga
      781 cgtcttcctg gtgctgaccg ggcaccgggc cgaggaggca ccggccgggg ccgcaggcaa
      841 cggcgccgcc aacggcgccg ccaacggcaa agggcggcgt ggacgccgcc ggggaggcca
      901 ggcatgagca tcgacaccac caccgaagtc ccgaccatcc cggcgtccga ccatccggtc
      961 ccgcacccgc agccgctccg gccgctccgg gacgccgcca ccgtcgccgt ccgcaacctc
     1021 atcgcctaca tccgggtgcc gcagctgctg gtcttctcca cggtgcagcc ggtgatcttc
     1081 gtgctgctct tccgctacgt cttcggcggg gcggtcaagc tgccgccgac ggtccgctac
     1141 ccctacgtcg acttcctgat gccgggcatc ttcgtgcaga cgaccgtgtt cggatcgatc
     1201 gccaccgcgg tcgggctggc gaccgacatc aagagcggct tgctggaacg gttccgatcg
     1261 ctgccgatgg cccgctcggc gctactggcg ggccggacga cggccgacct cgcccgcaac
     1321 gtggtcgtcg tcatcctgat gctggtggtg ggcttcgccg tcggcttccg catccagacc
     1381 aacgtggtcg cgctgctggc cgctctcggc ctggtgctgc tgttcggcta cacgatgagc
     1441 tgggtgttcg ccaccgtcgg cctggccgtc ggcgacccgg agacggctca ggcggccgcc
     1501 ttcccggtga tggccccgct ggtgttcgcc tcctcggcgt tcatcccggt ctcgacgatg
     1561 ccgacctggc tgcagggctt cgccacccac cagccggtat cggtcaccgc ctcggcggtg
     1621 cgggcactcg tcgacggcgg ggcgacgacg agcagcgtgg tccagtgcct ggcctggtgc
     1681 atcgggatcc tcgtcgtctt cgctccgctg gcggtgcgcc gctaccgccg ggccgtatag
     1741 cgccgggggc gggccgtgga gcggctcgct gcggtggagg agcggctcgc ggccgtggag
     1801 cggcccgcgt agccggtcga accgctacag cgtccggccg gtcagccgct cgtaagcctc
     1861 gaggtagccc gcccgggtcc ggtcgacgac gtccgggggc aggtccggag cgggcgggtt
     1921 gtggtcccaa ccctggacgt cgagccagtc gcgcaggtac tgcttgtcca gcgacggcgg
     1981 cgtcgagccc ggcgaccaac ggtccgccgg ccagaaccgg gacgagtccg gggtcagcac
     2041 ctcgtcggcc agggtcacct cgccgccggc ggcgccgttg ccgatgctga cgccgaactc
     2101 gaacttggtg tcggccagga tgatcccccg ggtgcgggcg tactccgagg cccgcttgta
     2161 caggccgatg gcgtagtccc gggcgacttt gagcgtcccc ggcgggcaca gcgcggcagc
     2221 ctcagcctcg gtgatgttct cgtcgtgtcc gaccgtcgcc ttggtggccg gcgtgaagat
     2281 cg
//
LOCUS       DATGJT010000645         2560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1438233, whole genome shotgun sequence.
ACCESSION   DATGJT010000645 DATGJT010000000
VERSION     DATGJT010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1438233"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VKX24_11150"
     CDS             <1..807
                     /locus_tag="VKX24_11150"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HLJ09089.1"
                     /translation="GWPCGCGEPVAECPFWTEVLGAAFAGAAVPTVAEMRRLEDGVAR
                     TRHVAKIRRRPADPAVARYRDVRRRLYRAIEQLTGARLLVDSSKDPADALVAAQIDEV
                     PLSVVHVIRDPRAVAFSWARPTRYPGRPGGELMRQRHPFDSSLRWLVWNGVIEAMLPR
                     AVGGRYLRVRYEDVVASPRESLRRMLEVADHGGEPPVGDDRVVVLSRPHCLASNPGRS
                     TTGPVALVADEAWEHEMTASARRAAVAPALPLMAHYGYGWRRPRQAARGA"
     gene            complement(828..1769)
                     /locus_tag="VKX24_11155"
     CDS             complement(828..1769)
                     /locus_tag="VKX24_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HLJ09090.1"
                     /translation="MLTTPLVVGALTAVPARADEPVIPTPGPTAATPVPTPAEPVLHC
                     SVNVDPSENLTAVVAAAPAKTTFCLASGTYSITSPVVPDDGDAFLGSSAARPVIDASA
                     TTIGIDARAAADVVLENIVVSGATLGSSRKSCPACGRGIFAGDGIQLWNVELTENAQN
                     GMSGSQNTATPWLIVDSQIVDNGDTAELGYASGGIKGVNPYTILNSYVADNLGSGIWC
                     DVGCLGGTWVVEGNTVVGNSRDGIRYEISDAGATIEGNDVEGNNTSTGNAGSQIRVEG
                     AGRKNSGVINDSILDNTVDGGKVIGCALTGVTCTGNA"
BASE COUNT          321 a          918 c          976 g          345 t
ORIGIN      
        1 ggctggccct gcggctgcgg ggagccggtc gccgagtgcc cgttctggac cgaggtgctc
       61 ggggccgcct tcgccggtgc cgcggtgccg accgtggccg agatgcggcg gctcgaggac
      121 ggcgtcgccc ggacccgcca cgtggccaag atccggcggc gccccgccga ccccgccgtc
      181 gcccgctacc gggacgtccg gcgccgtctc taccgggcga tcgagcagct gaccggggcg
      241 aggctgctcg tcgactcctc caaggacccc gcggacgccc tcgtcgcggc ccagatcgac
      301 gaggtccccc tgagcgtcgt gcacgtgatc cgggaccccc gcgccgtggc cttctcctgg
      361 gcgcgcccga cgcggtatcc gggccggccc gggggcgagc tcatgcgaca gcggcacccc
      421 ttcgacagct cgctgcgctg gctggtctgg aacggggtga tcgaggccat gctgccgcgg
      481 gccgtcggcg gccgctacct gcgggtgcgc tacgaggacg tcgtcgcgtc accgcgggag
      541 tcgctccggc ggatgctcga ggtggcagac cacgggggcg agccccccgt cggcgacgac
      601 cgggtggtcg tcctgtcgcg cccgcactgc ctggccagca accccggccg ttcgacgacc
      661 gggccggtgg cgctcgtcgc cgacgaggcc tgggagcacg agatgaccgc gtcggcccgt
      721 cgggccgcgg tcgcccccgc gctgccgctc atggcgcact acggatacgg gtggcggcgt
      781 ccccgccagg cggcgcgggg cgcgtagcgc tcggccggcc ggctgcctca ggcgttcccg
      841 gtgcaggtga cgccggtcag ggcacagccg atgaccttcc cgccgtccac cgtgttgtcg
      901 aggatcgagt cgttgatgac gcccgagttc ttgcggcccg caccctcgac tcggatctgg
      961 gaaccggcgt tgccggtcga ggtgttgttg ccctcgacgt cgttgccctc gatcgtcgcg
     1021 ccggcgtcgg agatctcgta gcggatcccg tcgcggctgt tgccgacgac cgtgttgccc
     1081 tcgacgaccc aggtcccgcc caggcagccg acgtcgcacc agatgccgct gccgaggttg
     1141 tcggcgacat aggagttgag gatggtgtag gggttgacgc ccttgatgcc gccggaggcg
     1201 tagccgagct cggccgtgtc gccgttgtcg acgatctggc tgtcgacgat gagccacggc
     1261 gtcgcggtgt tctgcgagcc ggacatgccg ttctgcgcgt tctcggtcaa ctccacgttc
     1321 cagagctgga tgccgtcgcc ggcgaagatg ccccgcccgc aggccgggca cgacttccgg
     1381 ctggacccga gggtggcccc gctcacgacg atgttctcga ggacgacgtc ggccgcggcg
     1441 cgggcgtcga tcccgatggt ggtcgcgctg gcgtcgatga ccggccgagc ggcggacgag
     1501 cccaagaacg cgtcgccgtc gtcggggacg accggggagg tgatggagta ggtaccgctg
     1561 gccagacaga aggtggtctt ggccggcgcg gcggcgacca ccgcggtcag gttctcggac
     1621 gggtcgacgt tcaccgagca gtgcagcacc ggttcggccg gggtcggcac cggcgtggcg
     1681 gcggtggggc ccggggtcgg gatgacgggc tcgtccgctc tcgccgggac ggccgtgagg
     1741 gctccgacga ccagtggcgt cgtcagcacg gcgacgagag cccaggcccg tggcctccgg
     1801 gcgaggcgcc cggacgagga caacgttgat cgacgcgtca gttgctgttt attgctcatt
     1861 caaggtgccc cgctgtttag tcgagagcgg cagcccgctc cactggtacc aacagcgccc
     1921 gacaaaggca gacgtgggcg taatggtcgc gtatcgcgct cggcgcaccg tggatggtca
     1981 gcgggtcgga ccacgtagag tgacggcgtg ccgcgggacc ccgagcgcgg tccggcaccc
     2041 gggctcacgc gacgatccgt accgaggcgc tccccgcccg catccgaccg gcagcgcgcc
     2101 ccccgtccca aaggcgagtc cgaaccgggc tcacgaagcc gcccggtggc tcccgctcgt
     2161 cgaggggaac ggccgcgacc agacggcgag tggcgtccat cccgtgcccg gagcggggcc
     2221 gacggcgctc ccggccggac ccagtcgggc gccggaggcc gccagggagc tccggcccgt
     2281 cgaggggaac ggccgcgacc cgacggcgag tggcgtccct cccgtgcccg gagcggggcc
     2341 gaccgcgccc cgggccggaa cgagtcgggc acccggggtc ggcagagcgc gccggctcgt
     2401 cgaggggatc ggccgcgacc cgacgacgaa tggcgtccct ctcgtgcctg gagtggcggc
     2461 gaccgcgccc cgggccgaac ccagtcgggc acccgggacc ggcagagcgc gccggcccgg
     2521 cgaggggatc ggccgggcaa cgacgagtgg cgtccctccc
//
LOCUS       DATGJT010000646         2274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_606078, whole genome shotgun sequence.
ACCESSION   DATGJT010000646 DATGJT010000000
VERSION     DATGJT010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606078"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1077)
                     /gene="mptB"
                     /locus_tag="VKX24_11160"
     CDS             complement(<1..1077)
                     /gene="mptB"
                     /locus_tag="VKX24_11160"
                     /inference="COORDINATES: protein motif:HMM:NF038066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol phosphomannose-dependent alpha 1,6
                     mannosyltransferase MptB"
                     /protein_id="HLJ09091.1"
                     /translation="MGVQDTTVTTADAGSRVSLLSRGVDRLADWDARVRTRWPFAALM
                     GPDIPPGSVRADAPGLLLRPAVLGFVALVAISAGVSQQRSPFVLKLPGAWFFGTPATG
                     TTASPHGELLGLAAVYGGLVLLMRVWWGLIRTVTQVPGVPVRKLVAVGALWTVPLLIA
                     PPLFSRDVYSYAAQGEMMSHHISPYHYGPGVLGATPMVNLVDPLWLNVPAPYGPLFMG
                     VDGLAASAAGHDALATVVLLRLLAVAGVGLMAIGIPMLARALGRDPAQALTLAVLNPV
                     TILHLIGGAHNDALMLGLLVLGVALSKQGRPIAGLVVCALATAVKAPAAIGVLYVGWE
                     WMGAGMSWRERLRPLVTAGLIATSV"
     gene            complement(1297..1381)
                     /locus_tag="VKX24_11165"
     tRNA            complement(1297..1381)
                     /locus_tag="VKX24_11165"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1345..1347),aa:Tyr,seq:gta)
     gene            1444..1932
                     /locus_tag="VKX24_11170"
     CDS             1444..1932
                     /locus_tag="VKX24_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HLJ09092.1"
                     /translation="MPSFDVVSEVDMQEMRNAVDQANREASTRFDFKGTDSTIEIGTG
                     ELVLRSATEDRLRALHQVLEEKLVRRQVSLKALEDGKVEEATKGTVRQHIKIKAGISA
                     DHAKKLNKAVKDLNLKGISSQAQGDQLRVSGKKRDDLQAAIAALKAEDFGIPLQFTNF
                     RD"
     gene            complement(1913..>2274)
                     /locus_tag="VKX24_11175"
     CDS             complement(1913..>2274)
                     /locus_tag="VKX24_11175"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ09093.1"
                     /translation="YAAVVAVGGDGEVAGFASLSPYRTRPGYSTTVEDSVYVDAGHRG
                     RGVGRLLLSEAVGLAQASGFHAVMARITAPQEPSLALHRSCRFALVGVEREVGRKFGR
                     WLDVALMQRLLVSPGSS"
BASE COUNT          395 a          780 c          840 g          259 t
ORIGIN      
        1 gactgaggtg gcgatgagcc cggcggtcac gaggggtcgc aaccgttctc gccacgacat
       61 gcccgcgccc atccactccc agccgacgta caggaccccg atggcggcgg gagccttgac
      121 ggcggtggcc agggcgcaca cgacgagacc ggcgatcggc cttccctgtt tggacagggc
      181 caccccgagc acgagcagtc ccagcatcaa ggcgtcgttg tgggcccccc cgatgagatg
      241 gaggatcgtc accgggttga gcacggcgag ggtgagcgcc tgggcgggat ctcggccgag
      301 ggcgcgggcc agcatgggga tgccgatcgc catgagcccg acgccggcca cagcgaggag
      361 ccgcaggagg accacggtgg ccagcgcgtc gtgcccggcg gcggaggcgg ccaggccgtc
      421 gacccccatg aagagcgggc cgtagggggc ggggacgttc aaccacagcg ggtcgaccag
      481 gttcaccatg ggggtggccc cgagcacgcc cggtccgtag tggtaggggc tgatgtggtg
      541 gctcatcatc tcgccctggg cggcgtagct gtagacgtcg cggctgaaca gcggcggggc
      601 gatgagcaac ggcacggtcc acaacgcgcc aacggcgacg agcttgcgca ccgggacgcc
      661 cggcacctgg gtgacggtcc ggatgaggcc ccaccacacc cgcatgagca ggacgagccc
      721 gccgtagacg gcggccagcc cgaggagttc cccgtgtggc gaagcggtcg tcccggtggc
      781 gggcgtcccg aagaaccagg cgccggggag cttcaagacg aagggcgagc gctgctgcga
      841 cacgccggcg gagatcgcca ccagggccac gaagccgagg acggctggac gcagcagcag
      901 ccccggcgcg tcggcgcgca cgctgccggg agggatgtcg gggcccatca gcgcggcgaa
      961 gggccagcgg gtgcgcacgc gggcgtccca gtcggcgagg cggtcgacac cgcgcgacag
     1021 cagagagacg cgtgagccgg cgtcggcggt cgtcaccgtc gtgtcctgta cgcccatggc
     1081 ctcggtcctc gtcccggggt ctcgctcggc ggcaccgact ccctgccacg ccggtcgcac
     1141 gggtgcagat gtggagccag gaagaccgtg ccctgagccg ggccggtcgt aacggcattg
     1201 taatgaaatc ggcccgcccg gcaagggccc gagcgtcggg acgcgcgccg agaggcggga
     1261 ccggcgcgga cggaagacga cgactcgtcg aacggctggt gggccgggag ggattcgaac
     1321 ccccgtaggc tgtgccggct gatttacagt cagctccctt tggccactcg ggcaccgacc
     1381 cgccgcagaa gatactcggg gccccacgag gcccggttcg ggccgggcga tagggtcgtc
     1441 accatgccca gcttcgacgt ggtgtccgag gtcgacatgc aggagatgcg caacgccgtg
     1501 gaccaggcca accgggaggc gtctacgcgc ttcgacttca agggcaccga ctcgacgatc
     1561 gagatcggca ccggggagct ggtcctgcgc tcggccaccg aggaccgcct gcgggccctg
     1621 caccaggtgc tggaggagaa gctcgtccgg cgccaggtgt cactcaaggc cctcgaggac
     1681 ggcaaggtcg aagaggccac caagggcacc gtccgccagc acatcaagat caaggccggg
     1741 atctcggccg atcacgccaa gaagctcaac aaagccgtga aggacctgaa cctcaagggg
     1801 atctcctccc aggcccaggg cgaccagctc cgggtgtcgg gcaagaagcg cgacgacctc
     1861 caagccgcca tcgccgccct gaaggccgag gacttcggca tcccgctgca gttcacgaac
     1921 ttccgggact gaccagcagc cgctgcatca aggccacgtc cagccagcgg ccgaacttgc
     1981 gcccgacctc ccgctcaacc ccgacgagcg cgaaccggca cgaccggtgc agggccagcg
     2041 acggctcctg gggcgcggtg atcctggcca tgaccgcatg gaagccgctg gcctgggcca
     2101 ggccgacggc ctcggagagc aggaggcggc cgacgccccg gccgcggtgg ccggcgtcga
     2161 cgtacaccga gtcctcgacc gtcgtcgagt acccggggcg ggtccggtag ggcgacagcg
     2221 aggcgaagcc ggccacctcg ccgtccccgc cgacggccac gacggcggcg taga
//
LOCUS       DATGJT010000647         3969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_499052, whole genome shotgun sequence.
ACCESSION   DATGJT010000647 DATGJT010000000
VERSION     DATGJT010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3969
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499052"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VKX24_11180"
     CDS             complement(<1..973)
                     /locus_tag="VKX24_11180"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HLJ09094.1"
                     /translation="MRAHLARTLGITAALSVAGTALITFYLVRQYAGTEALNELRNQA
                     SQSASETLSLESLHPQQAVETDLTQALKDLLTGSGDRVVYIGPEGDILGSDSTAIAVA
                     KKVDVAPVLAGKRIDGQVRAAGGSYVYVAEPVPGRRAAGVVAGLLLARPVGLAANFWR
                     PIIGRVLIAGALAVLVAVAASLLIARRLSDPLRHVSEATRRVAAGDLTSRVPVEGDGE
                     VADVAQQFNAMAEALSEARRREHEFLANVSHELRTPITAIRGYAEALADGTASGPAQA
                     EAIRVISDEAGRLELLIRDVMDLARLGAKELGLDLRPVTLGGTVHAAV"
     gene            complement(1156..1851)
                     /locus_tag="VKX24_11185"
                     /pseudo
     CDS             complement(1156..1851)
                     /locus_tag="VKX24_11185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020886324.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
     gene            2132..3238
                     /locus_tag="VKX24_11190"
     CDS             2132..3238
                     /locus_tag="VKX24_11190"
                     /inference="COORDINATES: protein motif:HMM:NF022702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3048 domain-containing protein"
                     /protein_id="HLJ09095.1"
                     /translation="MRLHRTAPRMLAALAVAVALLAAGCSKSTKTANKNASPTPSATV
                     SSQPEASSGPPCPLTGVASGSSGVPNRPIYAVKVPNDTAQARGHQTGLDYADIVYEEP
                     VEGGITRYIALFQCQNATRIEPVRSARFVDLDVLGQFGKVIFGHAGGITPVLAAVSTA
                     VSAGQLIDANYSGTPYASDYHRDGSLAEPDNLYTSTGEIYKTAGSSAGGAPSPVFTFL
                     SSASATVTAEPGAGPGSTLQVPFDQPGSGYNPTWTWNAATGTYLRSYNGTPDKLTDGQ
                     QNSAANVVIMSVNVYPSPYKEDPTGTHENYVTTTGQGTAWVCRDDSCAKGTWSRANTT
                     SPIQYNDSSGAAISFQPGSTWVELEPNSQTPSFS"
     gene            3235..>3969
                     /locus_tag="VKX24_11195"
     CDS             3235..>3969
                     /locus_tag="VKX24_11195"
                     /inference="COORDINATES: protein motif:HMM:NF022702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3048 domain-containing protein"
                     /protein_id="HLJ09096.1"
                     /translation="MSFGSGMGDRRPRRAGAALAVLGMLVAGCGAKPAATPKKSPTPS
                     PTSASAASTGSVCPLTGLPAPGGSVPNRPVLGIKVENAPEARPQTGLDKADVVYEEPV
                     EGGVTRFLAVYQCQDASRIEPVRSARVEDIDLLDQFPKPLFGNAGGSPPTEQMLSQAV
                     TAGTLVNIDYSGAGYSRDPARNNDEHSLYTSTQALYSRPDAKGGAVPSPIFTYAASPP
                     AGQPGSQVDVNFSQYSDVTWKWNASAG"
BASE COUNT          568 a         1484 c         1378 g          539 t
ORIGIN      
        1 cgaccgccgc gtgcaccgtg ccgccgagcg tcaccgggcg caggtcaagg cccaactcct
       61 tggcaccgag ccgggcgagg tccatcacgt cgcggatcag cagctcgagc cggccggcct
      121 cgtcgctgat caccctgatc gcctcggcct gcgccggccc cgaggcggtg ccgtcggcca
      181 gggcctcggc gtacccgcgg atggcggtga tcggggtgcg cagctcgtgg gacacgttgg
      241 cgaggaactc gtgctcccgg cgccgggcct cggagagcgc ctcggccatg gcgttgaact
      301 gctgggcgac gtcggcgacc tccccgtccc cctccaccgg cacccgggag gtcaggtcgc
      361 ctgcggccac gcgccgggtc gcctcggaga cgtggcgcaa cgggtcggac agccgtcgag
      421 cgatcagcag cgaggcggcg acggcgacca gcacggcgag cgctccggcg atcaacaccc
      481 ggccgatgat cgggcgccag aagttggcgg cgagcccgac cggccgggcg agcagcaggc
      541 cggcgaccac gccggccgcc cggcggccgg gcaccggctc ggccacatag acgtagctgc
      601 cgccggccgc ccggacctgg ccatcgatgc gcttgccggc cagcaccggg gcgacgtcga
      661 ccttcttcgc cacggcgatg gcggtcgagt cggagccgag gatgtcgccc tcggggccga
      721 tgtacacgac ccggtcgccg gagccggtca gcaggtcctt gagcgcctgc gtcaggtcgg
      781 tctcgaccgc ctgctggggg tgcagcgact cgaggctgag cgtctccgag gccgactggc
      841 tcgcctggtt ccgcagctcg ttcagcgcct cggtccccgc gtactggcgc acgaggtaga
      901 aggtgatcag tgcggtaccg gccaccgaca gggcggcggt gatgcccagg gtccgggcca
      961 ggtgggcgcg caccccaggg cgccgccggc tccgtggcgc cggggtggcc actacggcgt
     1021 tcccggctcg gccccgggtt cggccgcagg ttcgcccccg gcttcggctt cggcttcggc
     1081 ttcggccccg gcgtcggacc ttgccccgtg ttcggccccg gcctcgtctc cggctccggg
     1141 ctcgccgccc ggttcggctt cggccttgta cccgatcccc cggagggtcc tgacgatgcc
     1201 ggcgcccgcg ccgagcttgg cccggaggga cttcacgtgc gagtcgaccg tgcgggtgtc
     1261 gaccgggcgg tcgtagcccc acacctgctc gagcagccgg tcccgggagc agacgatgcc
     1321 ctggtggcgg atcaggtagg cgagaaggtc gaactccttg gcggtcagct cgaccaccct
     1381 ccccgccacg gtcacctgcc ggcgggccgg ctcgacccgg accccggcga gctccagggt
     1441 ttccggcgcc ggctcgctgg cggggcccgg cgccccggtc gagtcgacgg tccgccgcag
     1501 gaccgccttt acccgggcga cgagctcccg ggggctgaac ggcttggtga cgtagtcgtc
     1561 ggcccccagc tccaggccga cgatccggtc gacctcctgg tcccgggcgg tcagcatgat
     1621 caccggggtg cggctggtcg cccgcagccg ccggcagatc tcgaagccgt ccatgccggg
     1681 cagcatcacg tccaggacga tcagggcggg ggagagccgt tcgatctcgg cgagggcctg
     1741 ggccccgtcg gccacccagg cgacctcgaa cccctcgttg gcgaggtaga gccggatcag
     1801 cgaggcgatg ttgtgctcat cctcgacgat caggatcggg ctcgagggca tgaccgatga
     1861 tagtcccggg tccccgacgc ccggcgggat ggcgcagcgc cggacgaccc cggttccctg
     1921 gtccccagct gcctgtcgcg ccgagcgtac gggaggcatg gcggcttccc tctgtctagg
     1981 ttgatcgggc gaactttgcg tctgtttacc ggccccgata agctgcccgg agtcccgtgc
     2041 cgacggggcg gcccccagcc ccagcgctgg cggagccatg tccggcctgg ccacctgcga
     2101 tgcccggccg atcgtgaaac aggtgcctgg aatgagactg cacagaaccg ccccgaggat
     2161 gctcgcggcc ctcgctgtcg ccgtggcgct gcttgccgcc ggctgctcca agagcacgaa
     2221 gactgccaac aagaacgcct cgccgacccc gtcggcgacg gtctcgtccc agcctgaggc
     2281 gagcagcggc ccgccctgcc cgctgacggg ggtggcctcc gggtcgtccg gcgtgcccaa
     2341 ccggccgatc tacgcggtca aggtgccgaa cgacacggcc caggcccggg gccaccagac
     2401 cgggctcgac tacgccgaca tcgtctacga ggagccggtt gagggcggca tcacccgcta
     2461 catcgccctg ttccagtgtc agaacgccac ccggatcgag cccgtgcgca gcgcccgctt
     2521 cgtcgacctc gatgtcctcg gccagttcgg caaggtgatc ttcggccacg ccggcggtat
     2581 caccccggtg ctggccgcgg tctccaccgc ggtctcggcc gggcagctga tcgacgccaa
     2641 ctactcgggg actccctacg ccagcgacta ccaccgggac gggtcgctcg ccgagccaga
     2701 caacctgtac acctcgaccg gcgagatcta caagaccgcc gggtcttcgg cgggcggcgc
     2761 accgagcccc gtgttcacct tcctgagctc ggcgagcgcc accgtcaccg ccgagcctgg
     2821 ggccggtccg ggatcgacgc tgcaggtccc gttcgaccag ccggggtcgg gctacaaccc
     2881 cacctggacc tggaacgcgg caaccggcac ctacctgcgc agctacaacg gcacgccgga
     2941 caagctgacc gacgggcagc agaactcggc ggccaacgtg gtgatcatgt cggtcaacgt
     3001 ctatcccagc ccgtacaagg aagaccccac cggcacccac gagaactacg tcaccaccac
     3061 cgggcagggg acggcgtggg tgtgccggga cgactcgtgt gccaagggaa cgtggagccg
     3121 ggccaacacc acctcgccga tccagtacaa cgactcgtcc ggtgccgcga tctcgttcca
     3181 gccgggtagc acctgggtgg agctggagcc gaacagccag acccccagct tctcgtgagc
     3241 ttcggctccg ggatgggcga ccggcgaccg cgccgggccg gggcagccct cgccgtgctc
     3301 gggatgctcg tcgcgggctg cggggccaag cccgccgcca cgccgaagaa atcccccact
     3361 cccagcccga cgtccgcctc cgccgcatcg acggggtcgg tgtgcccgct gaccggcctg
     3421 ccggcccctg ggggcagcgt gcccaaccgc ccggtgctgg ggatcaaggt cgagaatgcc
     3481 cccgaggccc ggccgcagac cgggctcgac aaggccgacg tcgtctatga ggagccggtc
     3541 gagggtggag tcacccggtt cctggcggtc taccaatgcc aggatgcttc ccgcatcgag
     3601 ccggtgcgtt cggcccgggt cgaggacatc gacctgctgg accagttccc gaagccgctg
     3661 ttcggcaacg ccggcggcag cccgccgacc gagcagatgc tgagccaggc ggtcaccgcc
     3721 gggaccctgg tcaacatcga ctacagcggg gccggctact cccgcgaccc ggcccgcaac
     3781 aacgacgagc acagcttgta cacgtcgacc caggcgttgt actcacggcc cgacgccaag
     3841 ggcggcgccg tgccatcgcc gatcttcacc tacgccgcct cgccaccggc ggggcagccc
     3901 ggctcgcagg tcgacgtcaa cttctcccag tactccgacg tcacctggaa gtggaacgcc
     3961 tcggccggc
//
LOCUS       DATGJT010000648         3047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_816994, whole genome shotgun sequence.
ACCESSION   DATGJT010000648 DATGJT010000000
VERSION     DATGJT010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816994"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1312
                     /locus_tag="VKX24_11200"
     CDS             <1..1312
                     /locus_tag="VKX24_11200"
                     /inference="COORDINATES: protein motif:HMM:NF014907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenylyl-sulfate reductase subunit alpha"
                     /protein_id="HLJ09097.1"
                     /translation="IVFKAKAVISAGGGATGVYRPRAQGEGLGRIWYAPWNTGSAYAM
                     QIRAGAKMTQMEHRLVVARFKDGYGPVGMWFLLFKSQLKNSLGQIAEEYRLHELEEWA
                     PYGTAKPVPTPLRNHLMLNEIKEGLGPHYLRTDEALQRMFIEAQNDPKKIAEIESDAW
                     EDFLDMTMSQAHIWASQNIDPAKTPSELILTEPYLMGSHASATGAWCSGPEDVAPDGY
                     HWGYNRMTTVKGLFAAGDACGASAHKFSSGSYTEGRLAGKAAVQYVLDNNDVRIDQGA
                     ADDTIRALYKPFNNYGEHQHETSRSDLNAHYILPKMALHRIQKIMDEYAAGPGNYYMT
                     NGPTLERGLELMQYFREDCEHLAARDLHDLLRCWEVWDRVDSAEACLRHMLFRQETRW
                     PGYYYRGDFPKLDEANWKVFVNSRRDPKSGEWELEKVPFATKIT"
     gene            1319..2623
                     /locus_tag="VKX24_11205"
     CDS             1319..2623
                     /locus_tag="VKX24_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013822177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoB--CoM heterodisulfide reductase iron-sulfur
                     subunit A family protein"
                     /protein_id="HLJ09098.1"
                     /translation="MAGTNGNGRAAAVGRERGVLVVGGGMAGISAAIEAAEAGSDVYV
                     VEQGPSLGGRVAQLHQYFPKLCPPYCGLEINFRRIRSDHRHFKVFTLASLERVSGSVG
                     DYEATIRLDPRYVVLDRCIACNRCAEVCPVERPNAFNYGLDTTKAAYLPNPMAFPLKY
                     VIDGEACVGAGCNKCAEVCPTDAIDLQMQPKTVTVKVGSIVLATGWKPYDANRLSILG
                     FAEHRDVVSNVQFERLAAVDGPTCGRIVRPSDGREAKRVAFVQCAGSRDVNHLPYCSS
                     ICCLSSIKEATYVRAQYPDSEVFVFYIDIRAPGRNEDFYHRIRADEGVHFVKGKVAKV
                     VADPAGTGDLIVEADDMLSGAKRRVNVDMVVLATGMQPSLAGAPAIPGLPVEFDEHGF
                     ALENRPAGVFVAGVAHRPADVVTTVRDATGAALKAIRATVQA"
     gene            2620..>3047
                     /locus_tag="VKX24_11210"
     CDS             2620..>3047
                     /locus_tag="VKX24_11210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09099.1"
                     /translation="MSENQPTAPGGADRPADDTTVPAPDAAPDAPGAEAAGPGGTATA
                     TGWQPPAPPGKASPTVQAPAPAAGAWTPPPAPGQRPTAPPPGPATPAPPGAVPPGAPS
                     SPPPSAPPAPAPGQPPAWTPPGAAAPAAPPAPAAGGPPGG"
BASE COUNT          485 a         1144 c         1032 g          386 t
ORIGIN      
        1 catcgtcttc aaggccaagg ccgtcatctc ggccggcggc ggcgccaccg gcgtgtaccg
       61 gccccgggcc cagggcgagg gcctcggccg catctggtac gccccctgga acaccgggtc
      121 ggcctacgcc atgcagatcc gggccggggc caagatgacg cagatggagc accgcctcgt
      181 ggtggcccgc ttcaaggacg gctacggccc ggtcggcatg tggttcctcc tgttcaagtc
      241 gcagctgaag aactccctcg gtcagatcgc cgaggagtac cggctccacg agctcgagga
      301 gtgggcgccc tacggcacgg ccaagccggt gccgacgccg ctgcggaacc acctcatgct
      361 gaacgagatc aaggagggcc tgggcccgca ctacctgcgg accgacgaag ccctgcagcg
      421 gatgttcatt gaggcgcaga acgacccgaa gaagatcgcc gagatcgagt ccgacgcctg
      481 ggaggacttc ctcgacatga cgatgtccca ggcgcacatc tgggcgtcgc agaacatcga
      541 cccggccaag accccgtcgg agctgatcct caccgagccc tacctgatgg gctcgcacgc
      601 ttcggccacc ggcgcctggt gctccggccc ggaggacgtc gcccccgacg gctaccactg
      661 gggctacaac cggatgacca cggtgaaggg cctcttcgcc gccggcgacg cctgcggcgc
      721 ttcggcccac aagttctcct ccgggagcta taccgagggc cgcctggccg gcaaggcggc
      781 ggtgcaatac gtgctcgaca acaacgacgt ccggatcgac cagggcgccg ccgacgacac
      841 gatccgggcg ctctacaagc cgttcaacaa ctacggcgag caccagcacg aaaccagccg
      901 gtccgacctc aacgcccact acatcctgcc gaagatggcg ctccaccgga tccagaagat
      961 catggacgag tacgccgccg gccccgggaa ctactacatg accaacggcc cgacgctgga
     1021 gcggggtctg gagctcatgc agtacttccg ggaggactgc gagcacctgg cggcccgcga
     1081 cctccacgac ctgctgcgct gctgggaggt gtgggaccgg gtcgactcgg ccgaggcctg
     1141 tctgcggcac atgctcttcc ggcaggagac ccgctggccg ggctactact accggggcga
     1201 cttccccaag ctcgacgaag cgaactggaa ggtcttcgtc aactcgcggc gtgaccccaa
     1261 gagcggcgag tgggagctgg agaaggtgcc gttcgccacg aagatcacgt aaggcgtcat
     1321 ggcggggacg aacggaaacg ggcgcgccgc cgccgtcggc cgggaacggg gggtactggt
     1381 cgtcggcggc ggcatggccg gaatcagcgc cgccatcgaa gcggcggaag caggctccga
     1441 cgtctacgtc gtggagcagg gaccgtcgct cggagggcgc gtcgcccagc tgcaccagta
     1501 cttcccgaag ctctgcccgc cgtactgcgg cctggagatc aacttccggc ggatccgctc
     1561 cgaccaccgg cacttcaagg tcttcacgct ggcgtcgctg gaacgggtgt ccgggtcggt
     1621 gggcgactac gaggcgacga tccggctcga tccccgctac gtcgtcctcg accgctgcat
     1681 cgcctgcaac cgctgcgccg aggtctgccc cgtcgagcgg cccaacgcct tcaactacgg
     1741 gctcgacacc accaaggccg cctacctgcc gaatccgatg gcctttccgc tcaagtatgt
     1801 gatcgacggt gaggcctgcg tgggggcggg ctgcaacaag tgtgcggagg tctgcccgac
     1861 cgacgccatc gacctgcaga tgcagccgaa gacggtgacc gtgaaggtcg gatcgatcgt
     1921 gctggccacc gggtggaagc cctacgacgc caaccggctg tcgatcctcg gcttcgccga
     1981 gcaccgcgac gtggtcagca acgtgcagtt cgaacggctg gcggcggtgg acgggccgac
     2041 gtgcggccgc atcgtccggc cgagcgacgg ccgggaggcc aagcgggtgg cgttcgtgca
     2101 gtgcgccggc tcccgggacg tcaaccacct gccgtactgc tcgtcgatct gctgcctgtc
     2161 gtcgatcaag gaggcgacct acgtccgggc gcagtacccg gactcggagg tcttcgtctt
     2221 ctacatcgac atccgggcgc ccgggcgcaa cgaggacttc taccaccgca tccgggccga
     2281 cgagggcgtc cacttcgtca agggcaaggt ggccaaggtc gtcgccgacc cggccgggac
     2341 cggcgacctg atcgtcgaag ccgacgacat gctctccggc gccaagcggc gggtgaacgt
     2401 cgacatggtc gtgctggcca cggggatgca gccgtcgctg gccggcgccc cggcgatccc
     2461 cggcctgccg gtcgagttcg acgagcacgg cttcgccctc gagaaccggc ccgccggcgt
     2521 gttcgtggcc ggcgtcgccc accggccggc cgacgtcgtc accaccgtcc gcgacgccac
     2581 cggcgccgcc ctcaaggcca tccgggccac ggtgcaggca tgagcgagaa ccagcccacc
     2641 gctcccggcg gcgccgaccg gcccgccgac gacaccactg tcccggcccc cgacgccgcg
     2701 cccgacgcgc ccggcgccga ggcggccggg ccgggcggaa cggccacggc gacgggatgg
     2761 cagcccccgg cgccccccgg caaggcttcc ccgacggtcc aggcgccggc cccggcagcc
     2821 ggcgcctgga ccccacctcc ggcaccgggc cagcgcccga ccgccccgcc gcccgggcct
     2881 gcgacgccgg ctccgccggg ggcggtaccg cccggcgccc cgagctcccc cccgccgtcc
     2941 gctcccccgg ccccggcccc gggccagccg ccggcctgga cgccacccgg cgccgccgcc
     3001 ccggccgccc caccggcccc cgccgccgga ggcccgcccg gaggctg
//
LOCUS       DATGJT010000649         2382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_89292, whole genome shotgun sequence.
ACCESSION   DATGJT010000649 DATGJT010000000
VERSION     DATGJT010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89292"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..899
                     /locus_tag="VKX24_11215"
     CDS             180..899
                     /locus_tag="VKX24_11215"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HLJ09100.1"
                     /translation="MSFLARLFHWFTTSANWTGSAGIPLLFERSLELSAAVVVLALLL
                     GGGLGVVLGHTGRGGLVAVNAANAFRAVPTLALLTLLAIQPAISLKWDGFLASGIALT
                     ALAIPPILTNTYTGMREVDADVRDAAKAMGLRSGHVLWRVEAPLALPFVMAGVRTAAI
                     EVVATSTLAAYVGFSDLGTYVIAGLDTQNTVEAVAGALLVGAMAALVAGSLGLLGRAV
                     TPPPLRVRRRIRDLAARPAAM"
     gene            1021..1935
                     /locus_tag="VKX24_11220"
     CDS             1021..1935
                     /locus_tag="VKX24_11220"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ09101.1"
                     /translation="MSRTRVLLSAAVMVATLAGALSASVASSAGAASKPRIVIGSTNF
                     EEQAIVSNIYADILKRAGYPVTLEPALGTRAIVVPAIEKAQIDLEPDYAASLLGFLHG
                     GNPQKAGDNIATAIPADQRALSKYGVTVLKASKALDTNVFAVTRATANKYHLTTLSSL
                     KPYASKMVLGGPPECPTFAGCEPGLQQVYGLHFSGFKPLDEAGPLSVAALKNGEVQVV
                     ELFSSDGNVVSNNFVALTDNKHLEGADYIVPVIRKSVDSPTVTRLLNAIDAKLTTVAI
                     SKLNIDVTGSKKEQPAAVASTWLKSVGY"
     gene            2047..>2382
                     /locus_tag="VKX24_11225"
     CDS             2047..>2382
                     /locus_tag="VKX24_11225"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLJ09102.1"
                     /translation="MGRPTSYEVSGGLATITLDLPEKRNALSTEMLHSLGDDLLRAGG
                     DPGVRVVVLTHTGSTFCAGADLSVAGATSARYDIAGILRLVQDTPKPVVARIAGQCLG
                     GGVGLAAVCD"
BASE COUNT          337 a          879 c          819 g          347 t
ORIGIN      
        1 ggccagcaga tcacctacgg cttcaacatc ggctacaaca cgccgatcat cgtcggcctg
       61 gtgctgtcga tcgccctggc ggccgtcgcc gacctcgtcc tcgtcggcgc cgagagggtg
      121 gtcgtcccct ggtcccgggg cagccgcaag gcccggcaag cggcgggctg aggagctcca
      181 tgtccttcct cgcccgtctc ttccactggt tcaccacgtc ggccaactgg accggttcgg
      241 ccggcatccc actgctcttc gagcggtcgc tcgagctgag cgcggcggtc gtcgtcctgg
      301 cgctcctcct cggcggcggg ctgggcgtgg tcctcgggca caccggccgg ggcgggctgg
      361 tcgcggtcaa cgccgccaac gcgttccggg ccgtcccgac cctcgcgctg ctgacgctgc
      421 tcgccatcca gcccgccatc tcgctcaagt gggacgggtt cctcgcctcg gggatcgcgc
      481 tgaccgccct cgccatcccg ccgatcctga ccaacaccta caccggcatg cgcgaggtgg
      541 acgccgacgt gcgggacgcg gccaaggcga tggggctgcg gtccgggcac gtcctgtggc
      601 gggtggaggc ccccctggcg ctccccttcg tgatggccgg cgtgcgcacg gccgccatcg
      661 aggtcgtggc cacctcgacg ctcgccgcct acgtcggctt ctcggacctc ggcacctacg
      721 tgatcgccgg cctcgacacg cagaacaccg tcgaggccgt ggccggggcc ctgctcgtgg
      781 gggcgatggc ggcgctcgtc gccggttcgc tcggcctcct cggccgggcg gtgacgccgc
      841 caccgctgag ggtgaggcgc cgcatccgcg acctggcggc tcgaccagcg gcgatgtgac
      901 tcgtgtgcaa atatgaccag gaccgtcacc attctgacta ggtttcgtaa agcgccggtc
      961 gcggcatctc tagcgggcgt gccgccggcc ggccaccccc cctcacgaaa ggaacccccg
     1021 atgtcccgaa cccgtgtcct cctgtccgct gccgtcatgg tggcgacgct ggccggcgcg
     1081 ctgtcggcgt cggtggcctc gtcggccggg gcggcctcca agccgaggat cgtcatcggc
     1141 tcgacgaact tcgaggagca ggcgatcgtc tccaacatct acgccgacat cctcaagcgg
     1201 gccggctacc cggtgacgct cgagccggcg ctcggaaccc gggcgatcgt cgtgcccgcc
     1261 atcgagaagg cccagatcga cctcgagccc gactacgcgg cctcgctgct cggcttcctg
     1321 cacgggggca acccccagaa ggcgggcgac aacatcgcga cggcgatccc ggccgaccag
     1381 agggcgctca gcaagtacgg ggtcaccgtg ctcaaggcct cgaaggcgct cgacaccaac
     1441 gtgttcgccg tgaccagggc gacggccaac aagtaccacc tgacgacgct gtccagcctg
     1501 aagccgtacg cgtcgaagat ggtgctcggc ggcccgccgg agtgcccgac cttcgccggc
     1561 tgcgagccgg ggctccagca ggtctacggg ttgcacttct cgggcttcaa gccgctggac
     1621 gaggcggggc cgctcagcgt cgccgcgttg aagaacggcg aggtccaggt ggtcgagctc
     1681 ttctcgagcg acggcaacgt ggtgtcgaac aacttcgtcg ccctgaccga caacaagcac
     1741 ctggaaggcg ccgactacat cgtccccgtg atccgcaagt cggtcgacag cccgaccgtc
     1801 acgaggctgc tcaacgcgat cgacgccaag ctgaccacgg tggccatctc caagctcaac
     1861 atcgacgtga ccggctccaa gaaggagcag ccggctgcgg tggcctcgac ctggctcaag
     1921 tcggtcggct actgatcgca ccccggcggt cgcgggcgcc gttcgggcgc ccgcgaccca
     1981 cggggtcgca cagcggggga gggcgggcgc gccggtagtg tcggcgggcg aggaccggga
     2041 gggagcgtgg ggcggccgac cagctacgag gtgagcggcg gcctcgccac catcaccctc
     2101 gacctgcccg agaagcgcaa cgcgctcagc accgagatgc tccactccct gggcgacgac
     2161 ctgctccggg cggggggtga cccgggagtc cgggtggtcg tcctcaccca caccgggagc
     2221 accttctgcg ccggggccga cctgtccgtc gccggggcca cctccgcccg ctacgacatc
     2281 gcgggcatcc tccggctcgt ccaggacacg cccaagccgg tcgtggcccg gatcgccggg
     2341 cagtgcctgg gcggtggggt cggcctcgcc gcggtgtgcg ac
//
LOCUS       DATGJT010000650         3081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_918989, whole genome shotgun sequence.
ACCESSION   DATGJT010000650 DATGJT010000000
VERSION     DATGJT010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918989"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /locus_tag="VKX24_11230"
     CDS             complement(<1..565)
                     /locus_tag="VKX24_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013226810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLJ09103.1"
                     /translation="MRVLVLGADGYLGWPTALYLSHRGHEVAAVDNFVRRQYDYELGV
                     SSLVPISHLQRRIKVWEEISGLGIEPFVGDLNDAEFVFDTLRTFRPDAIVHFAEQRSA
                     PYSMIDRSHAVYTQVNNVVGNLNLLFAMAEVDRNIHLVKLGTMGEYGTPNIDIEEGFI
                     EITHRGRTDTLPYPKQPGSFYHLSKVHD"
     gene            complement(885..>3081)
                     /locus_tag="VKX24_11235"
     CDS             complement(885..>3081)
                     /locus_tag="VKX24_11235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012922185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HLJ09104.1"
                     /translation="KQSIYRFRRADISMFLAAASRFGQKNGVVELTANFRTSPAVIAW
                     INATFGTLIVRTDNDDPPVASQPSYVPLDAVWDDPETGPPVGVLGLAVHPQGIKADEL
                     RQCEARDVAGAVARVVREGWSVSHPDRKKGWRRACLGDITILVPARTSLPFLEDALDS
                     LAIPYRAESSSLVYSTRAVRDLLMVLRAVADPTNELHVVAALRTPLFGCGDDDLVRFR
                     IERSGSWSYLADQRDSVPQDDPVRAGLAYLRSLYDERHWLAPSELLDRIARDRRAMDL
                     GFAEGRPRDVWRRLRFVIDQARAWNEATGGNLRQYLSWIDIQTKEGARVAEAILPETD
                     DDAVRIMTIHAAKGLEFPVTIVSGMSTVPQVRPALAEVVFPPTGTVGYRVGRHAKTDE
                     YVDWAPIDEQMGYHERIRLLYVACTRARDHLIVSLHRKQKVNDVSEDKRTNAELLHDG
                     MGPLLEELPDLGEEAGPVEAPTTDQLPALLPFDVWEADRNAALHRSARPTTISATSLT
                     EEGERDVEEEPADPGLQKLPRNLDLPPWLKGRYGTAVGRAVHGVLQTIDLATGAGLDD
                     AVAAQCEAEAIVDRAEDVRRLVASALASPSIREAAASPNWRELYVCAPVGERQLEGYI
                     DLLYRGTKGLVVVDYKTASTSNPDDLAQRVQGYRVQGASYALTVRETTGEPVTRVTFA
                     FLTPTGPVELHLEDDDLSAAVDEVTVLLVGRQSGSGQAAVAIEDLGEQP"
BASE COUNT          455 a         1038 c         1069 g          519 t
ORIGIN      
        1 tgtcgtgcac cttggagagg tggtagaagg agcccggctg cttggggtac gggagggtgt
       61 cggttcgacc ccggtgggtg atctcgatga acccctcctc gatgtcgatg ttgggcgtcc
      121 cgtactcgcc catcgtgccc agcttcacga gatggatgtt ccggtcgacc tcggccatgg
      181 cgaacaggag gttgaggttc cccaccacgt tgttcacctg cgtgtacacg gcgtgcgacc
      241 ggtcgatcat cgagtagggg gcggagcgct gctcggcgaa gtgcacgatg gcgtcgggtc
      301 ggaacgtccg aagcgtgtcg aagacaaact cggcgtcgtt gagatcgccc acgaagggct
      361 cgatgccgag ccccgagatc tcctcccaga ccttgatccg gcgctggagg tggctgatgg
      421 gaacgaggct cgacaccccg agctcgtagt cgtactggcg gcggacgaag ttgtcgaccg
      481 ccgcaacctc gtggccgcgg tgggacaggt agagcgctgt gggccagccg aggtaaccgt
      541 cggctccgag gacgaggact cgcatggtct aaggggctcc ttctcgtgag ttccacccgc
      601 ggcagtcggc gccgccggct cgagctgggc tcttcgcaat caaatcgcaa catccatttt
      661 ggcggatcca cctgagattt ccctgggagc aggagccctg gtggccgtgg ttcaatcccg
      721 ggcgcggtca catgccgtgg gcagtctcac tctgcgtggt ttctggcccg tgatggctga
      781 gcctccgggc gccgcgtccc cggctggcag ccgtctggca gctacgtcgc catgggaacg
      841 tcaacggcgg gactcggcgt gttccggagg agcgctcgct cgtttcaggg ctgttcgccc
      901 aggtcctcga tcgccaccgc ggcttgcccc gacccgctct ggcggccgac aagaagaacg
      961 gtgacctcgt cgacggcggc gctcaggtcg tcgtcctcga ggtggagttc caccgggccc
     1021 gtcggcgtca ggaacgcgaa cgtgactcgg gtgacgggct cgccggtggt ctcgcgaacc
     1081 gtcagcgcgt acgacgcccc ctgcacccgg tagccctgga cccgctgggc gagatcgtcg
     1141 gggttcgagg tggacgcggt cttgtagtcg acgacgacca ggccctttgt gccgcggtag
     1201 aggaggtcga tgtaaccctc gagctgccgc tcgcccaccg gcgcgcacac gtagagctcg
     1261 cgccagttcg gactggccgc cgcctctcgg atcgagggcg acgccagggc cgaggcgacc
     1321 agccgccgca cgtcctcggc ccggtcgacg atcgcttcgg cctcgcactg ggccgcaacc
     1381 gcgtcatcaa ggcctgcccc ggtggccagg tcgatggtct ggagcactcc gtggacggcc
     1441 cggccgaccg ccgtgccgta gcggcccttc agccacggag ggaggtcgag gtttcgcgga
     1501 agtttctgca ggcccgggtc ggcgggctcc tcttcgacgt cgcgctcccc ttcctcggtc
     1561 agcgaggtcg ccgagatggt ggtgggccgg gccgaacggt ggagcgctgc gttccgatcc
     1621 gcctcccaaa cgtcgaaggg caagagagcc ggcaactggt cagtcgtcgg cgcctcgacc
     1681 gggccggcct cttcaccgag gtcgggcagt tcttcgagca gcggccccat cccgtcgtgg
     1741 agcaattccg cgttcgtccg cttgtcctcg ctgacgtcgt tcaccttctg cttccgatgc
     1801 agggagacga tgaggtggtc cctcgcccgg gtgcaggcca cgtacagcag ccggatgcgc
     1861 tcgtgatagc ccatctgctc atcgatcgga gcccagtcga cgtactcgtc ggtcttggcg
     1921 tgccgcccga cgcggtagcc gaccgtgccg gtcggcggga agaccacctc cgcaagagcc
     1981 ggtcgcacct ggggcacggt ggacatgccc gagacgatcg tcaccgggaa ctcgaggccc
     2041 ttcgccgcat ggatggtcat gatccgcacg gcgtcgtcgt cggtctccgg gaggatggct
     2101 tcggccaccc gcgccccttc cttggtctgg atgtcgatcc agctgaggta ctggcgcagg
     2161 ttgccgccgg tcgcctcgtt ccacgccctc gcctggtcga tgacgaaccg caggcggcgc
     2221 cacacgtctc ggggccgacc ctcggcaaaa ccgaggtcca tggcccgccg gtcccgagcg
     2281 atgcggtcga gcagttcgga gggggccagc cagtgccgct cgtcgtacag cgagcggagg
     2341 taggccaggc cggcacgcac cgggtcgtcc tggggaaccg agtcccgttg gtcggccagg
     2401 tagctccagc tcccggaccg ctcgatgcgg aagcgcacga ggtcgtcgtc gccgcacccg
     2461 aacagcggcg tacggagtgc cgccacgaca tgaagctcgt tggtggggtc ggcgaccgct
     2521 cgcagcacca tcagcaggtc ccggaccgcc cgggtcgagt acacgagaga gctcgactcc
     2581 gcccggtacg ggatcgctag cgagtccagg gcgtcctcca ggaacggcag cgaggtccgg
     2641 gcggggacga ggatcgtgat gtcccccagg caggcgcgac gccacccttt cttccggtca
     2701 gggtggctca cgctccaccc ctcccggacg acccgggcca ccgcaccggc cacgtcccgg
     2761 gcctcgcact ggcgcagctc gtcggccttg atgccctgcg ggtgcacggc cagaccgagg
     2821 actcccacgg gtgggcccgt ctccgggtcg tcccagaccg catcgagcgg gacatagctt
     2881 ggctgcgaag cgaccggcgg atcgtcgttg tccgttctca cgatcagcgt cccgaaggtg
     2941 gcgttgatcc aggcgatgac tgcggggctc gtgcggaagt tcgccgtcag ctcgaccacg
     3001 ccattcttct gcccgaatcg tgacgccgcg gccaggaaca tcgagatgtc ggctctccgg
     3061 aaccggtaga tcgactgctt c
//
LOCUS       DATGJT010000651         3444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_817410, whole genome shotgun sequence.
ACCESSION   DATGJT010000651 DATGJT010000000
VERSION     DATGJT010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3444
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817410"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VKX24_11240"
     CDS             <1..230
                     /locus_tag="VKX24_11240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09105.1"
                     /translation="AGEGGSVEIERASPTELRVAKANPNNGWQPEVTGPSGPRITVKF
                     THPGYSPSLIHFAASMDQAGRMLHTRVQSCG"
     gene            269..520
                     /locus_tag="VKX24_11245"
     CDS             269..520
                     /locus_tag="VKX24_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007570444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HLJ09106.1"
                     /translation="MGLFSWIVLGFLAGLVGGMVTGARQARGCLPRVVVGVLGALVGG
                     ALARAAGIGTVSGVNLGSIAIAGLGSVLLLLVLEAIERR"
     gene            complement(557..1639)
                     /locus_tag="VKX24_11250"
     CDS             complement(557..1639)
                     /locus_tag="VKX24_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014742372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLJ09107.1"
                     /translation="MTNALHVRGVVLPGEEERDLWVVDGRLTFEAVAGAETVAAGGFV
                     VPGLVDAHCHIGLGFEGPVHDHDELRAQARADTAAGALLVRDAGSPADTRFLDGEPDA
                     PRILRCGRHIARPKRYSPHTAVEIEPEELVDTVAREAAAGGGGWVKLVGDWIDRGVGD
                     LTPLWPADGLRAAVARAHAAGARVAVHVFSEEALPDLIDAGVDSVEHGTGLTEDLVAR
                     LAASGAALVPTLINIDNFPGIADSARAKFPVYAERMDRLHGTARARIRAAFEAGVPIY
                     CGTDAGGYVHHGRVVDEIVALHAAGLPAEAALAAGSWAARRWLGHAGLEEGAPADFLV
                     VDGDPRADLGVLHSPVRIVLRGRILG"
     gene            1737..2624
                     /locus_tag="VKX24_11255"
     CDS             1737..2624
                     /locus_tag="VKX24_11255"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HLJ09108.1"
                     /translation="MPAPVFGGDFPDPFVLVAGGRYFAYGTQSADVNVQLIESADLED
                     WRYLGDAVPQLPAWAEPGRTWSPAALPRPGSGGVVLYFAVRHRAAGRQCIAVATADDP
                     AGPFVPLTEGDGPLVFQTDRGGSIDPSPFVDADGRPYLLWKSDDNAVGRPPSLWGAPL
                     RDDGLALAGPAVELLRHDAEWERPLIEAPSLVRTGEGAYVLFYSGGWWESAGYAVGWA
                     TGPAPLGPFRKETVDGPWLASSPGMAGPGGAEVFADAVGAWRIAFHAWTPPRVGYDAG
                     GRRSLWIEPLGFDGGRPRL"
     gene            complement(2695..>3444)
                     /locus_tag="VKX24_11260"
     CDS             complement(2695..>3444)
                     /locus_tag="VKX24_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012894033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HLJ09109.1"
                     /translation="FTGGTMALLAAAGWRVVLVVATAGERGETSAAVGPGVPLGVRRM
                     GETAGAAECLGAQRVEFLGYHDSGLDNGGGRNGGRPAGAFADASVEEAAARLARILDE
                     ERPGALVGYDARGIYGHVDHVQVHRVAAAAAAAAGVPTVYESTVDREYLHFVETHLVV
                     EATIAAQPERLALGLGLAAAPLGLSTIEVDCTVDVRPVLPVKRRAMAAHASQIPETSS
                     AMRLPDADFAAVYGYEWYARRGPLGPIDDLV"
BASE COUNT          394 a         1301 c         1322 g          427 t
ORIGIN      
        1 ccgccggcga gggcggcagc gtcgagatcg agcgggcctc accgaccgag cttcgggtgg
       61 ccaaggcgaa ccccaacaac ggctggcagc ccgaggtgac cggaccgtcg ggcccccgca
      121 tcacggtgaa gttcacccac cccggctatt cgccgtcgct catccacttc gccgcctcga
      181 tggaccaggc gggccgcatg ctacacaccc gggtccagag ctgcggctga cggcggcctc
      241 ccggcgccgg tgcctctagc ctgagccgat gggcctgttc tcctggatcg tcctcgggtt
      301 cctcgccggg ctcgtcggtg gcatggtcac cggtgcccgg caggcccggg ggtgtctgcc
      361 ccgggtcgtc gtgggcgtgc tcggggcgct ggtcgggggg gcgctggccc gggcggccgg
      421 gatcggcacg gtctccgggg tgaacctcgg ctcgatcgcc atcgccggcc tcggctcggt
      481 gctgctgctg ttggtgctgg aggccatcga gcggcgctga ccggccaggg ggccccgggg
      541 ccggcgagcg gcggcctcag cccaggatcc ggccccgcag cacgatccgg acgggcgagt
      601 ggaggacgcc gaggtcggcc cggggatcgc cgtcgaccac caggaagtcg gcgggggcgc
      661 cctcctccag cccggcgtgg cccagccagc ggcgggcggc ccacgacccg gcggccaggg
      721 cggcctcggc cgggagcccg gcggcgtgga gggccacgat ctcgtcgacg acccggccgt
      781 ggtggacgta gccgccggcg tcggtcccgc agtagatggg gacgccggcc tcgaaggcgg
      841 cccggatccg ggcccgggcg gtgccgtgca ggcggtccat ccgctcggcg tagaccggga
      901 acttggcccg ggcggagtcg gcgatgccgg ggaagttgtc gatgttgatc agcgtcggca
      961 ccagcgccgc gccgctggcc gccagccggg cgacgaggtc ctcggtgagg ccggtgccgt
     1021 gctccacgga gtcgacgccg gcgtcgatca gatcgggcag cgcctcttcg gagaagacgt
     1081 ggacggcgac ccgggcgccg gccgcatgcg cccgggccac cgccgcccgc aagccgtcgg
     1141 cgggccacag cggggtgagg tcgccgacgc cgcggtcgat ccagtcgccg acgagcttca
     1201 cccaaccccc gccgccggcc gccgcctccc gggcgacggt gtcgacgagc tcctcgggct
     1261 cgatctccac cgccgtgtgg ggcgagtacc gcttcggccg ggcgatgtgc ctgccgcagc
     1321 gcaggatgcg gggggcgtcg ggctcgccgt cgaggaagcg ggtgtcggcc ggggagccgg
     1381 cgtcgcgtac cagcagggcg ccggcggcgg tgtcggcccg ggcctgggcg cggagctcgt
     1441 cgtggtcgtg gaccggcccc tcgaacccga ggccgatgtg gcagtgggca tcgacgagcc
     1501 cgggcaccac gaaccccccg gcggccaccg tctcggcgcc cgccaccgcc tcgaaggtga
     1561 ggcgcccgtc gacgacccag aggtcccgct cctcctcgcc ggggaggacg acgccccgga
     1621 cgtgcagtgc attcgtcatc ggacggcgat gctacgaccc gccgaacttc gtccggcgat
     1681 cctcaccgcg ccggccccgg ggtgaggaac gccggttccc cgggtagccg tcattgatgc
     1741 ccgctccggt gttcggcggc gacttccccg atccgttcgt gctcgtcgcc ggcgggcgct
     1801 acttcgccta cgggacgcag agcgccgacg tcaacgtcca gctgatcgag tcggccgacc
     1861 tggaggactg gcggtatctc ggcgacgccg tgccccagct gccggcctgg gccgagccgg
     1921 ggaggacgtg gtcgccggcg gcgctgcccc ggcccgggag cggcggcgtc gtgctctact
     1981 tcgccgtccg ccaccgggcc gccggccggc agtgcatcgc cgtggccacg gccgatgacc
     2041 ccgccggccc cttcgtcccc ctgaccgaag gcgacgggcc cctggtcttc cagaccgacc
     2101 ggggcggctc catcgacccc agcccgttcg tcgacgccga cggccgcccc tatctgctct
     2161 ggaagagcga cgacaacgcc gtcggccggc cgcccagcct ctggggtgcg ccgctgcggg
     2221 acgacggcct cgccctggcc ggcccggcgg tggagctgct gcgccacgac gccgagtggg
     2281 agcggcccct gatcgaggcg ccgtcgctgg tgaggaccgg cgagggcgcc tacgtcctgt
     2341 tctacagcgg tggctggtgg gagtcggccg gctacgccgt gggctgggcc accggcccgg
     2401 cgccgctcgg cccgttccgc aaggagacgg tcgacgggcc gtggctggcg tcgagcccgg
     2461 ggatggccgg ccccggcggc gccgaggtgt tcgccgacgc cgtcggggcg tggcgcatcg
     2521 ccttccacgc ctggacgccg ccccgggtcg gctacgacgc cggcgggcgc cgctcgctgt
     2581 ggatcgagcc cctgggcttc gacggcggcc gcccccgcct ctgaccgccc cccgcgttcc
     2641 gggcaggaaa aaccgcgcct ggcgcggttt ttcctgccga gatccgggct ctggtcagac
     2701 gaggtcgtcg atcgggccga gcgggccccg gcgggcgtac cactcgtagc cgtagacggc
     2761 ggcgaagtcg gcgtcgggca gccgcatggc cgacgacgtc tcggggatct ggctggcgtg
     2821 ggcggccatg gcccgccgct tgaccggcag gacgggccgg acgtcgacgg tgcagtccac
     2881 ctcgatcgtc gacaggccga gcggggcggc ggccagcccg aggcccaggg ccaaccgttc
     2941 gggctgggcg gcgatggtcg cctccacgac gagatgcgtc tccacgaagt ggaggtactc
     3001 ccggtcgacg gtcgactcgt agacggtggg caccccggcc gcggcggcgg ccgccgccgc
     3061 cacccggtgc acctgcacgt ggtcgacgtg cccgtagatc ccccgggcgt cgtagccgac
     3121 cagcgcgccg ggccgctcct cgtccaggat gcgggccagg cgggcggccg cctcctcgac
     3181 ggaggcgtcg gcgaaggccc cggcgggccg gccgccgttg cggccgccgc cgttgtcgag
     3241 acccgagtcg tggtagccga ggaactccac ccgctgcgcc cccaggcact cggcggcccc
     3301 ggccgtctca cccatgcgcc gcacgccgag ggggacaccg ggcccgaccg ccgccgacgt
     3361 ctcgcctcgc tcgccggcgg tggccaccac cagcacgacc cgccacccgg ccgcggccag
     3421 gagggccatc gtgccgccgg tgaa
//
LOCUS       DATGJT010000652         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1537592, whole genome shotgun sequence.
ACCESSION   DATGJT010000652 DATGJT010000000
VERSION     DATGJT010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1537592"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..388
                     /locus_tag="VKX24_11265"
     CDS             <1..388
                     /locus_tag="VKX24_11265"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ09110.1"
                     /translation="LMAGRPGSIVAVSGFDSVRVVANHGLLGAAKAALEQLVRYLAVE
                     LRPDDVAVNSVVPGFVATDSARKWADTSHPGGWEAFEARWASMHEVIIAPERIAEIIA
                     FLCTPAGRCIRGYNLMVDGGVTLPFE"
     gene            423..1367
                     /locus_tag="VKX24_11270"
     CDS             423..1367
                     /locus_tag="VKX24_11270"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004020277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HLJ09111.1"
                     /translation="MPLRIFTEPQQGASYDRLLAVAQEAERLGFDAFFRSDHFLRIGG
                     DPAGPDARPGPTDAWVTLGALARETSRIRLGTLVTSATFRLPGPLAVAVAEVDAMSGG
                     RVEFGLGAGWYEDEHSAYGIPFPPLRERFDRLEEQLAVITGLWTTPEGKRFSFDGRHY
                     RLQESPALPKPLQQPHPPIIVGGGGARRTPALAARYAAEFNLAFQPRDRFTAARDRVR
                     AACEAAGRDPASMVYSAALVLCCGADETEFERRAAAIGRAPEELRASGAAGTVVEVAG
                     RLREWRDAGAERIYLQVLDLSDLDHLRLVAEAVAPQLA"
     gene            complement(1420..>2192)
                     /locus_tag="VKX24_11275"
     CDS             complement(1420..>2192)
                     /locus_tag="VKX24_11275"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ09112.1"
                     /translation="SAPISLRRRNGRLMRHWFEDVADHLGPAYLRYSFTKGTEQEVAF
                     LVDALRLDPGARILDVGCGPGRHAHALARRGFPVVGVDISERFVALARDGAPAGTAVA
                     FERADARSLRFEAEFDAVISLCQGAFGLAGGPGAPLDPDRAVLEGMARALRPGGRLAL
                     SAFSAYFQVRFLGEADSFDAAAGVNHERTAVRNEDGREAPAELWTTCFTPRELRLLAE
                     TAGLRPEDVWSVAPGDYAARPPDIDHPEFLLLATRPAD"
BASE COUNT          280 a          808 c          827 g          277 t
ORIGIN      
        1 gctgatggcc ggccggcccg gctcgatcgt cgccgtgtcg gggttcgact ccgtccgggt
       61 ggtggccaac cacggcctgc tcggagcggc caaggcggcg ctggagcagc tcgtccgcta
      121 cctggccgtg gagctgcggc cggacgacgt cgccgtcaac agcgtggtgc cggggttcgt
      181 ggccaccgac tcggcccgga agtgggccga caccagccac cccggcggct gggaggcgtt
      241 cgaggcccgc tgggcctcga tgcacgaggt catcatcgcc ccggagcgca tcgccgagat
      301 catcgccttc ctctgcacgc cggccggacg ctgcatccgg ggctacaacc tgatggtcga
      361 cggcggcgtc acgcttccgt tcgagtagcg cccgccccgg cggcaaggct gcggtcatga
      421 gcctgccgct gcgcatcttc accgagcccc agcagggcgc ctcctacgac cggctgctgg
      481 ccgtggccca ggaggccgag cggctgggct tcgacgcctt cttccggtcc gaccacttcc
      541 tccgcatcgg cggcgacccc gccgggcccg acgcccgccc cggcccgacc gacgcctggg
      601 tcacgctcgg cgccctggcc cgggagacga gccgcatccg gctggggacg ctggtcacgt
      661 cggccacgtt ccgcctcccc ggcccgctgg cggtggcggt ggccgaggtc gacgccatga
      721 gcggcggacg ggtggagttc ggcctcggcg ccggctggta cgaggacgag cactcggcct
      781 acggcattcc gttcccgccg ctccgcgagc gcttcgaccg cctcgaggag cagctggccg
      841 tcatcaccgg actgtggacg acgcccgagg gcaagcggtt ctccttcgac gggcgccact
      901 accggctgca ggagtcgccg gcgctgccga agccgctcca gcagccccac ccgccgatca
      961 tcgtcggcgg gggcggggcc cgccgtacgc cggcgctggc cgcccgctac gccgccgagt
     1021 tcaacctggc ctttcagccg cgggaccgct tcaccgcggc ccgcgaccgg gtgcgggccg
     1081 cctgcgaggc ggccgggcgc gacccggcgt cgatggtgta ctcggcggcg ctggtgctgt
     1141 gctgcggcgc cgacgagacg gagttcgagc ggcgggcggc ggccatcggc cgggcgccgg
     1201 aggagctgcg ggccagcggc gcggccggca ccgtcgtcga ggtggccggc cggctccggg
     1261 aatggcgcga cgccggagcg gagcgcatct acctccaggt cctcgacctg agcgacctcg
     1321 accacctgcg cctggtggcc gaggcggtgg caccccagct cgcctgagga gctttggaca
     1381 tttgtcgggg acagtccccg atacatgtcc aaacgtcgtt cagtccgccg gccgggtcgc
     1441 caggagcagg aactcggggt ggtcgatgtc gggcggacgg gcggcgtagt cgccgggcgc
     1501 caccgaccag acgtcctcgg gccgcagacc ggccgtctcg gccagcagcc gcagctccct
     1561 cggagtgaag cacgtcgtcc acagctcggc cggcgcctcc cgcccgtcct cgttgcggac
     1621 ggcggtgcgc tcgtggttca cgccggcggc ggcgtcgaac gagtcggcct ccccgaggaa
     1681 gcggacctgg aagtaggccg agaaggccga cagggccagg cgcccgcccg gccgtagcgc
     1741 ccgggccatc ccttcgagga cggcccggtc cggatcgagc ggagcgcccg gcccgccggc
     1801 gaggccgaag gcgccctggc agagcgagat gacggcgtcg aactccgcct cgaaccgcag
     1861 cgaccgggcg tcggcccgct cgaaggcgac ggcggtgccg gccggggcgc cgtcccgggc
     1921 cagggccacg aaccgttccg agatgtcgac gccgacaacc gggaaccccc ggcgggcgag
     1981 ggcgtgggcg tggcggcccg gcccgcagcc gacgtcgagg atgcgggcgc cggggtcgag
     2041 ccgcagggcg tcgacgagga acgccacctc ttgctccgtg cccttggtga aggagtagcg
     2101 caggtaggcc gggccgaggt ggtcggcgac gtcctcgaac cagtggcgca ttaacctccc
     2161 gtttcttcgg cgcagagaga tcggcgcaga ga
//
LOCUS       DATGJT010000653         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1438730, whole genome shotgun sequence.
ACCESSION   DATGJT010000653 DATGJT010000000
VERSION     DATGJT010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1438730"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..745)
                     /locus_tag="VKX24_11280"
     CDS             complement(59..745)
                     /locus_tag="VKX24_11280"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ09113.1"
                     /translation="MLEEGRRAMSSVLNDAKLESLLGDLHATSKAQDQEIERYFFHER
                     TGPWLGMEPRDHAFFADKMVALDKEKAEFCYMICRAIGARRIVEVGTSYGVSTLYLAA
                     AVRDNGGGVVFAAEHEPTKVKFARANLEATGLSSFVELHEADVVEACEGFGSPVDFVL
                     FDIWSQVTRPVLDVLQPRLRRGAVVCTDGTGGERSRETHRLFEILGDASLFRTLTMPF
                     EGGFEFSVKI"
     gene            complement(998..1927)
                     /locus_tag="VKX24_11285"
     CDS             complement(998..1927)
                     /locus_tag="VKX24_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012349679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HLJ09114.1"
                     /translation="MIIGIVVGVVAFAALLLGAMSVRIVREYQRIVLFRLGRAVGTRG
                     PGLVLINPAIDRTNWVDLRERYLEIPSQTAITSDNAPISIDFIIFYKVVDSQMSVLAV
                     QNFAGAALNVAATTLRSVVGDMALDDVLSKREDMNALLRVRLDEVTERWGVKVTSVEV
                     REINPPPGVLEAMTRQMSAERTRRAQVTEAEGQKSAAILAAEGQRQAAITLAEGTQKA
                     TVLAAEGERQAAILKAQGFSGGLEKILEVARTLDENTLLLQYLDTLRQVGSSPSTKFV
                     VPMELSSLLNGLRSLVPVQPPSVPSIPPSANGS"
     gene            complement(1924..>2222)
                     /locus_tag="VKX24_11290"
     CDS             complement(1924..>2222)
                     /locus_tag="VKX24_11290"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HLJ09115.1"
                     /translation="KLERAGVGGSTAPGVVGSEGVAVTDLHPDGIVRVRGENWSATSL
                     NGSVEAGQRIQVIESSGVRLGVWSEDGEIREIGNGEVPGGGLGRGVDERREGAQ"
BASE COUNT          356 a          783 c          728 g          355 t
ORIGIN      
        1 tcacccaggg gctacggccg cggcgccgat ccttgcatcg gccagaccgt gcgccgagtc
       61 agatcttgac cgagaactcg aagccgcctt cgaacggcat cgtcaatgtc cggaagaggg
      121 aggcgtcccc gaggatctcg aacagtcggt gggtctcgcg gcttcgctcg ccacccgtgc
      181 catcggtgca gacgacggcc ccgcggcgca ggcgtggctg caggacgtcg agcaccgggc
      241 gggtcacctg ggaccagatg tcgaagagca cgaagtcgac gggagagccg aacccttcgc
      301 acgcttccac gacgtcggcc tcgtggagtt cgacgaagct cgacagcccg gtggcctcga
      361 gattggcccg ggcgaacttc accttggtcg gctcgtgctc tgcagcgaag acgacccctc
      421 cgccgttgtc ccggaccgcc gccgccaagt acagagtgga gactccgtag gaggtgccca
      481 cttcaacgat ccggcgcgcg ccgatggcgc ggcagatcat gtagcagaac tcggccttct
      541 ctttgtcgag cgccaccatc ttgtcggcga agaacgcgtg atcccggggc tccatgccca
      601 accacggccc cgttcgttca tggaagaagt agcgctcaat ctcctggtcc tgagccttgc
      661 tggtcgcatg aaggtcgccg agcaaactct cgagcttcgc atcattcaag acactcgaca
      721 tcgcacgtcg gccttcctcg agcaaagacc taggccggtc cggccgccag ccgggtgctg
      781 gcgtcttggt cgttggaacc gggcgacgcc aatgcgcctg gtgaccgggg accagatttc
      841 gagcacatcc cggcccatgt catagcgttc gctgccgacg ccgcgctcga tcgcccggac
      901 tgttgggctc gagccccgca cagggcgtca cccggggctg ccgagccaaa tggcctcggt
      961 gccgcccggc cgcagctatg ggacgggcct ggcccgctca gctcccgttg gccgagggcg
     1021 ggatcgaagg caccgagggg ggctggacgg ggaccagcga gcgcagcccg ttcagcaggc
     1081 tgctcagttc catcggcacc acgaacttcg tggacgggga agagcccacc tgcctcaggg
     1141 tgtcgaggta ctggaggagc agcgtgttct cgtcaagggt gcgggccacc tcgaggatct
     1201 tctcgaggcc cccagagaag ccctgggcct tgaggatcgc cgcctggcgc tcaccttctg
     1261 ccgccagcac cgtggccttc tgggtcccct cggcgagggt gatcgccgcc tgccgctggc
     1321 cctcggcggc gaggatcgca gccgacttct gcccctcggc ctcggtcacc tgcgcccgcc
     1381 gggtccgctc ggccgacatc tgccgggtca tggcctcgag gacgccgggc ggcgggttga
     1441 tctcgcgcac ctcgacgctc gtgaccttca ccccccaccg ttcggtgacc tcgtcgagcc
     1501 ggacacggag gagggcgttc atgtcctcgc gcttcgacag cacgtcgtcg agggccatgt
     1561 cgccgaccac gctgcgcagg gtggtcgcgg cgacgttcag agcggcgccg gcgaagttct
     1621 gcacggccag caccgacatc tgggagtcga cgaccttgta gaagatgatg aagtcgatcg
     1681 agatgggggc gttgtcactc gtgatcgccg tctgcgaagg aatctcgagg tagcgctcgc
     1741 gcaggtccac ccagttggtc cggtcgatcg ccggattgat gagcacgagg cccggtcccc
     1801 tggtcccgac cgcccgcccg agccggaaca ggacgatccg ctggtactcc cggacgatgc
     1861 gcacggacat cgccccgagc agcagggcgg cgaaggcgac gacgccgacg acgattccga
     1921 tgatcattgt gctccttctc gccgctcgtc gacaccgcgt ccgagccctc cgccgggcac
     1981 ttcgccgttc ccgatctctc ggatctcgcc gtcctcggac cagaccccca ggcggacccc
     2041 cgaggattcg atgacctgga tccgctgtcc ggcctccacc gaaccgttca gggaggtggc
     2101 cgaccagttc tcgccccgca cccggacgat gccgtcggga tggagatcgg tcacagcgac
     2161 cccctccgat ccgacgacgc cgggcgccgt cgagccaccg accccggcac gctcgagctt
     2221 ga
//
LOCUS       DATGJT010000654         3046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_710803, whole genome shotgun sequence.
ACCESSION   DATGJT010000654 DATGJT010000000
VERSION     DATGJT010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_710803"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="VKX24_11295"
     CDS             complement(<1..853)
                     /locus_tag="VKX24_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012922212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ09116.1"
                     /translation="MPSRGVAVVTGAAAGVGRAVARAFAERGYDVGLIARGEDGLAAA
                     AKEVEAAGRRAHAVSADVADHAAVDRAAGEIETVLGPIGVWVNDAMVSVFALFTDIEP
                     DEFERVTAVTYHGYVNGTRAALARMLPRDRGVIVQIGSALAYRGIPAQSAYCGAKHAI
                     QGFTESVRCELLYRKSRVRIGMVQLPAVNTPQFDWVLSRLPRRPQPVPPIFQPELIAK
                     AVVRMAEHPRREMWLTERTILAILGNRVAPGYLDRRLGRSGVQSQQTDQPADRDRPAN
                     LWKPVGGD"
     gene            951..2207
                     /locus_tag="VKX24_11300"
     CDS             951..2207
                     /locus_tag="VKX24_11300"
                     /inference="COORDINATES: protein motif:HMM:NF045448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase"
                     /protein_id="HLJ09117.1"
                     /translation="MTQPRRAYCDWPSGATTMAMSSGDHVKAIEERRLRRLEEELRDE
                     RVRLPLDGPGGRRLLAELAYARRPLHHESHIPGYGALVFDGVPDWDSCPQVPLLVPAP
                     GVPAEVLRRYADGRSSFVVVTPDGITGLATFEHSVEDEGAAVRMQRSGAVVVQRTRRG
                     AVRVCAGHGVVLWNGSRWMFKPRAEDYVRALRRLAPHADPAVLAGLLELAVHSLSSAR
                     VGATFVWNVDGRPPDDPRGGLLELGRAITGPPLSVARRGHFPALLSVESQVDLATVVA
                     ADGSVGPIGVRLDHSPAAGAVVPPTGGARHTSARRFTFDVGAVLVVVVSESGRVTVFS
                     GGAVAAEISPDQPDSGRSGESGEELSTADSETVICGRCEQPLLVLATAVGPRPDASAG
                     ACPVCGTPIALAAGRIILGVPVGPPE"
     gene            2302..2484
                     /locus_tag="VKX24_11305"
     CDS             2302..2484
                     /locus_tag="VKX24_11305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09118.1"
                     /translation="MFKRLAIMIAATAAVAVPASGAFASTPPKANGALPPQACFAVYP
                     APLQPVLCGQGHGAKP"
     gene            complement(2584..2949)
                     /locus_tag="VKX24_11310"
     CDS             complement(2584..2949)
                     /locus_tag="VKX24_11310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09119.1"
                     /translation="MQLCNVARSKKLLTLVPALALGLSGTAAWAGVSNAPSAPTPPSA
                     PTLPAPPTVPSTPSLPGLPKAPALPGTPKAPSLPGTPSTPSAPKAPSSPHPSVPVIPG
                     RPWGSIGGPSGPGLPYIPS"
BASE COUNT          372 a         1128 c         1127 g          419 t
ORIGIN      
        1 ggtcgccgcc caccggcttc cagaggttgg ccggccggtc gcggtcggcg ggctggtcgg
       61 tctgctgcga ctgcacgccg ctgcggccca ggcgccggtc gagatagccg ggggccaccc
      121 ggttgccgag gatggccagg atcgtccgct ccgtcagcca catctcccgc cgggggtgct
      181 cggccatgcg gacgaccgcc ttggcgatca gctccggctg gaagatcggc gggacgggct
      241 gcggacggcg gggcaggcgg gacagcaccc agtcgaactg cggcgtgttg accgccggga
      301 gctgcaccat cccgatgcgg acgcgggact tgcgatagag cagctcgcag cgcaccgatt
      361 ccgtgaagcc ctggatggcg tgcttggcgc cgcagtaggc cgactgggcc gggatccccc
      421 ggtaggccag cgccgatccg atctggacga tcacgccccg gtcccggggg agcatccggg
      481 ccagcgccgc ccgggtgccg ttgacgtagc cgtggtaggt gacggccgtc acccgttcga
      541 actcgtccgg ttcgatgtcg gtgaacaagg cgaagaccga gaccatggcg tcgttgaccc
      601 acacgccaat cggccccagg accgtttcga tctcgcccgc ggcgcggtcc accgcggcgt
      661 ggtcggcgac gtcggcggac acggcgtggg ctcgtcggcc ggccgcttcg acctccttgg
      721 ccgcggcggc cagcccgtcc tcgccccggg cgatcaaccc gacgtcgtaa ccccgctcgg
      781 cgaacgcccg ggccacggcc cgtccgacgc cggcggcggc accggtcacc acggccactc
      841 cccggctggg cactccccgg ctcggtcctc cctggctcgg tactccccgg cttcccacct
      901 cggcctccct tcgctctccg tcgccagggc aataccccgg ggcggggcgg atgacgcagc
      961 cgcgccgggc atactgcgac tggccctccg gggcgacgac catggccatg tcttccggcg
     1021 accacgtgaa ggcaatcgag gaacggcgcc tgcgccgcct cgaggaggaa ctgcgcgacg
     1081 agcgcgtccg gctccccctc gacggccccg ggggccgccg gttgctggcg gagttggcct
     1141 acgcccgccg tccgctgcat cacgagagcc acattccggg ctacggcgca ctggtcttcg
     1201 acggggtgcc cgactgggac tcctgccccc aggtaccgct gctcgtgccg gctcccggcg
     1261 tgccggccga ggtcctgcgg cgctacgccg acggccgttc ctcgttcgtg gtcgtgacgc
     1321 ccgacggcat caccggattg gcgacgttcg agcacagcgt ggaggacgaa ggggccgccg
     1381 tccgcatgca gcgcagcggc gcggtggtcg tgcagcgcac ccgccggggc gcggtgcggg
     1441 tctgcgccgg tcacggcgtg gtgctgtgga acggctcgcg gtggatgttc aagccccggg
     1501 ccgaggacta cgtgcgggcc ctgcggcggc tcgcccccca cgccgatccc gccgtcctcg
     1561 ccgggctgct ggagctggcg gtgcactcgc tctcgtcggc ccgggtcggg gcgacgttcg
     1621 tctggaacgt ggacgggcgc ccgcccgacg atccccgcgg cggcctgctc gagctcggcc
     1681 gggccatcac cggtccgccg ctgtccgtcg cccgccgggg ccacttcccg gcgctgctgt
     1741 cggtggagtc ccaggtcgac ctggccaccg tggtggccgc cgacggctcg gtcggcccga
     1801 tcggcgtgcg gctcgatcac tccccggccg ccggcgccgt cgtgccgccg accggaggcg
     1861 cccgccacac gtcggcccgg cgcttcacgt tcgacgtcgg agcggtgctg gtggttgtgg
     1921 tgtcggagtc gggacgggtg acggtgttct ccggcggggc ggtggcggcc gagatcagcc
     1981 ccgatcagcc cgacagcggc aggagcggcg aatccggcga ggagctgtcg accgccgaca
     2041 gcgaaacggt gatctgcggt cgctgcgagc agccgctgct ggtgctggcc accgccgtcg
     2101 ggccccgccc cgacgcctcg gccggggcct gtccggtgtg cggcacgccc atcgccctcg
     2161 ccgccggccg gatcatcctc ggcgtcccgg tcggcccgcc tgaatgactt cacagggtgg
     2221 cccgcctaga atggcgcccg acgcggaaca aaaccgtcac gtcataccaa acaccgcgtt
     2281 gacatcacaa ggagctgagg gatgttcaag cgcttggcca tcatgatcgc cgccaccgcc
     2341 gccgtcgccg ttcccgcctc gggcgcgttc gcctcgaccc cgccgaaggc caacggggcc
     2401 ctgccgccgc aggcctgctt cgccgtctac cccgccccgc tgcagccggt gctgtgcggg
     2461 cagggccacg gcgcaaagcc ctgatccggg cgacccttca ccgtttcgaa ccgttctagg
     2521 gctggcccgg cgccgtcgcg ctctcgacgc cgggccagct gcgcaccctc tgacccgaat
     2581 cgatcaggag gggatgtagg gcaggcccgg gccgctcggg ccgccgatgg aaccccaggg
     2641 ccgaccgggg atcaccggca cggaaggatg cggcgagctc ggcgccttcg gggctgacgg
     2701 cgtactcggc gtgccgggga gcgacggcgc cttcggcgtg cccggcaggg ccggggcctt
     2761 cgggagcccc gggagcgacg gcgtgctcgg caccgtcgga ggagcgggca gcgttggcgc
     2821 gctcggcggc gtgggagccg acggggcgtt gctgacgccg gcccaggcgg cggttccgct
     2881 caggccgagg gcgagcgcgg ggacgagggt gaggagcttc ttcgaccgtg cgacgttgca
     2941 gagctgcata gctgtggcct cctcgtacga catgcaacgg aggccgccgg cccggcagcg
     3001 aaggctgttg atgccccgcc tggcagagca ggacgacggc cccgcc
//
LOCUS       DATGJT010000655         2623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1021466, whole genome shotgun sequence.
ACCESSION   DATGJT010000655 DATGJT010000000
VERSION     DATGJT010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1021466"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1547
                     /locus_tag="VKX24_11315"
     CDS             <1..1547
                     /locus_tag="VKX24_11315"
                     /inference="COORDINATES: protein motif:HMM:NF009381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLJ09120.1"
                     /translation="PIGAEAAFRGVIDLLGDTATLYDTAGTPPARGTEGPIPDDLVNE
                     EHDVHEQLVEGIVVADDDLMTRYLEGETIDRGELQKALAVGVADGSVFPVTCASAFSG
                     VGVDRLANLLAELAPPADHRYPAQVQAGDTVSEISCDPAGPPLLSVCKTLSDQHAGRL
                     SLCKVISGTIRPDVVLVNTRTRAEERLHVLESLRGHTTAQVTDAVAGDFVAVPRLVGT
                     KTGDTLAPKGQPVTFSLPDADPPALQAAVKPTSRADEDKLMTSLQRLAEEDPSLTVHR
                     VDETHQTVLGTAGEVHLAITLERLTRKFGVNVEREDVVVPYRETITKPAEAEGRYKKQ
                     TGGHGQFGVAHLRVEPLPRGEGFQFRDEVVGGAIPRQYIPAVEKGVLEAMEQGGPSGF
                     PVVDVAVTCDDGKFHSVDSSEMSFKMAGAMAFKEALEKAGPVILEPISQLQVTVPVEL
                     QGDVLGDLSSKRGRVQGTESSDGLQTITALVPTAELSRYAIDLRALTGGRGRFRVHHD
                     HYDVKP"
     gene            1658..2413
                     /locus_tag="VKX24_11320"
     CDS             1658..2413
                     /locus_tag="VKX24_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09121.1"
                     /translation="MSNRFGSATSPRGRRLVSGLGALALPVLVATGCSIVHKAATAVH
                     AVEGNRATIDGFTSSLSSQPSSFEVRYATTGSSPGVVVYAAQSPDEVAFTLTPSGSAT
                     PSLDVVVNPSGEYACEPPGQGSPPTACQKLASADKASEAQVYGLYTPAHWVAFLRGLA
                     LAAGLAGDKVSRSSMSVNGFALSCVDLVASGVPGTSVICSTSFGLLGYVKVASDPTSF
                     EITSYSSSPGASLFALPPGATVSTSPATTAPTG"
     gene            complement(2442..>2623)
                     /locus_tag="VKX24_11325"
     CDS             complement(2442..>2623)
                     /locus_tag="VKX24_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011686016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HIT family hydrolase"
                     /protein_id="HLJ09122.1"
                     /translation="ANLGRAAGAGIPRHLHLHVVPRWAGDTNFMTAVAGVRVLPESLP
                     AAWEKIHAAWGGDRG"
BASE COUNT          365 a          987 c          901 g          370 t
ORIGIN      
        1 tgcctatcgg cgccgaggcc gccttccgtg gggtcatcga cctgctcggt gacaccgcca
       61 ccctctacga caccgcgggc acgcccccgg cgcgcggcac cgaagggccc atccccgacg
      121 atctggtgaa cgaggagcac gacgtccacg aacagctcgt cgaggggatc gtcgtcgccg
      181 acgacgatct catgacccgc tacctcgagg gcgagaccat cgaccgtggc gagctgcaga
      241 aggctctggc cgtcggggtc gccgacggga gcgtgttccc ggtcacctgc gcctcggcct
      301 tctcgggcgt cggggtggac cggctggcca acctcctcgc ggagctcgcc ccgccggccg
      361 accaccggta cccggcgcag gtccaggcgg gcgacacggt gagcgagatc tcgtgcgacc
      421 cggcggggcc gcctctcctc agcgtgtgca agacgctgtc cgaccagcac gcgggacggc
      481 tctcgttgtg caaggtcatc tcggggacca tccgccccga cgtggtgctg gtcaacacga
      541 ggacgcgcgc cgaggaacgg ctgcacgtcc tcgagtccct gcggggccac acgaccgccc
      601 aggtgaccga cgcggtcgcc ggcgacttcg tcgcggtgcc ccggctggtg gggacgaaga
      661 ccggggacac gctcgccccg aagggccagc cggtgacctt ctccctcccc gacgccgacc
      721 cgcccgcgct gcaggcggcg gtcaagccga cgtcgcgggc ggacgaggac aagctcatga
      781 cctcgctcca gcggctcgct gaagaggatc cgtcgctcac cgtccaccgg gtcgacgaga
      841 cccaccagac cgtcctcggc acggccggcg aggtgcacct cgcgatcacc ctcgagcggc
      901 tgacccgcaa gttcggcgtg aacgtcgaac gcgaagacgt ggtcgtcccc taccgcgaga
      961 ccatcaccaa gccggccgag gccgaagggc ggtacaagaa gcagaccggc ggccacggcc
     1021 agttcggcgt ggcccacctg cgcgtcgaac ccctcccgcg cggcgagggg ttccagttcc
     1081 gcgacgaggt ggtcggcggc gcgatccccc gccagtacat cccggcggtg gagaagggcg
     1141 tgctcgaggc catggagcag ggtggcccgt ccgggttccc ggtggtcgac gtcgcggtca
     1201 cctgtgacga cggcaagttc cactcggtcg actcctccga gatgagcttc aagatggccg
     1261 gagccatggc cttcaaggag gcgctcgaga aagccggccc ggtcatcctc gagccgatct
     1321 cgcagctcca ggtgacggtc ccggtcgagc tccagggcga cgtcttgggc gacctgtcgt
     1381 ccaagcgggg ccgggtgcag gggaccgagt cctccgacgg tctgcagacc atcacggcgc
     1441 tcgtcccgac ggccgagctc tcccgctacg ccatcgacct gcgggcgctc accgggggcc
     1501 ggggccgctt ccgggtgcac cacgaccact acgacgtgaa gccctagggg ctcggccaac
     1561 tccaccgagc ccggggaacc agactgtcgt aacctcccca ctgcggtcgc gcccgttcga
     1621 ccgccgagcg cttggcgggc cgggaggggc gggtcccatg tcgaaccgct tcgggtcggc
     1681 gacctctcct cgggggcgcc gccttgtctc gggtctcggc gcgctggcgt tgcccgtcct
     1741 cgtcgccacc ggctgttcga tcgtgcacaa ggcggcgacc gccgtccacg ccgtcgaggg
     1801 caaccgggcg acgatcgacg gcttcacctc gtcgctttcg agccagccgt cctcattcga
     1861 ggtgcgctac gcgaccacgg gatcgtcgcc gggcgtcgtc gtctacgccg cccagtcacc
     1921 cgacgaggtc gcgttcaccc tcaccccgtc cggctcggcg accccgagcc tcgatgtcgt
     1981 cgtcaacccg tcgggcgagt acgcctgcga gccccccggg cagggctcgc ccccgaccgc
     2041 ctgccagaag ttggcctcgg ccgacaaggc gtcggaggcc caggtctacg gcctctacac
     2101 gccggcccac tgggtcgcgt tcctgcgcgg cctcgcgctc gccgccggcc tggcggggga
     2161 caaggtgagc cgttcgtcga tgagcgtgaa cggcttcgcc ctgtcctgcg tggacctggt
     2221 cgcctcgggc gttcccggga cgagcgtcat ctgcagcaca tccttcgggc tgctcggcta
     2281 cgtcaaggtg gcgtccgacc cgaccagctt cgagatcacc tcgtattcga gttctccggg
     2341 ggcctcgctc ttcgcgctcc caccgggggc gacggtctcg acctccccgg ccaccaccgc
     2401 gccgaccggc tgaggcatcc ggccggcagc gatccgccgg gtcagccccg gtccccgccc
     2461 caggcggcgt ggatcttctc ccaggcggcc gggagcgact cggggagcac ccggacgccg
     2521 gccaccgcgg tcatgaagtt ggtgtcgccg gcccagcgcg gcacgacgtg caggtgcagg
     2581 tgtcggggga tcccggcccc ggcggcccgt ccgaggttcg ccc
//
LOCUS       DATGJT010000656         3097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_403518, whole genome shotgun sequence.
ACCESSION   DATGJT010000656 DATGJT010000000
VERSION     DATGJT010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403518"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /locus_tag="VKX24_11330"
     CDS             <1..884
                     /locus_tag="VKX24_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013423081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLJ09123.1"
                     /translation="VCTEKVEAQGSKVIMETRVAAIRHSGGRATSVVVDSEGGRTEHP
                     CTHVISSMPISSLIRAMDPPAPAEVLAAANGLAYRDFLTVALVVPEAAGFPDNWIYVH
                     SPEVRLGRIQNFGSWSPYLVKEGRTCLGLEYFVFEGDDLWRADDADLVELGKRELEKI
                     GLVKASDVEAGYVVRMPKAYPVYDETYRANVETMRAWLEANATNVYPVGRNGMHRYNN
                     QDHSMYTAMLSVENIFGAHHDIWNVNVEEEYHEEKTLDVREGGGGEHGTGRAAPITPR
                     RAATEVVIPDEAGVDAG"
     gene            complement(912..2720)
                     /locus_tag="VKX24_11335"
     CDS             complement(912..2720)
                     /locus_tag="VKX24_11335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09124.1"
                     /translation="MTSAVGTDPPAVAVPEEAAAKPAGGVRAAVVSHGPAFLGFTVLT
                     AVFFWPVVAHLPTRILSDGADGAAYLWNLWALPHALFSGHNPFATDHLFYPVGALTAF
                     NTNMPLVAVLSWPLQKLFGLGVAANLMQLGAVVLSGFGAYLLADHVTGDRRAAFVAGA
                     AFTFAPYRFAHLSHYDLAHLEFLPFGLLALLRLYERPSRGRALAYGAVVGLTFLTDLY
                     YVVFLLVASAVIAAWHWRTTLTRDMAVRLGQAVATALVVAAPLLAAMLRELLFSHSLD
                     PLTNWANADNYSSDLFSWVTPTVQQRVWATHVGRLAATTGGERLAFPGAVVLLLVAFV
                     LVRRHAGRHRLWLALTGVFVVLSLGPFLHVAGRTGGWFSAYGARFAVPLPYFVLHFVP
                     VVNGVRVPGRFSIMGALALDVLAAVAVARLSVLAGRRNRRWAVAVPIAALAFVLVESY
                     PATIPLQKTAVPRPYAAIAADPGQRAVLEVPLQWRTGFGEFGDTNGDHTIAMYDAVRH
                     GKPLVGGMVARYPERRLRMILTDPLYEEVMDLQAPEDPGYPTTFGVADLAQAGIGYVV
                     YHRDQPRPRAEAYLAGLHLPVLADDGTVIVWKVPSR"
     gene            complement(2717..>3097)
                     /locus_tag="VKX24_11340"
     CDS             complement(2717..>3097)
                     /locus_tag="VKX24_11340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase type 11"
                     /protein_id="HLJ09125.1"
                     /translation="RHCRSRGLRAFLPEEFLASEWARPAAFDSLLLAHVVEHMARPAA
                     EDLLRTYVPFLKPDGALILITPQERGFRSDPTHVEFVDFDGAVALGRRLGFEPVTRRS
                     FPFPRPVGRIFPYNEFVVVCRRPR"
BASE COUNT          527 a         1058 c         1164 g          348 t
ORIGIN      
        1 aggtctgcac cgagaaggtc gaggcccagg ggtcgaaggt gatcatggag acccgggtgg
       61 ccgccatccg gcattccggc ggacgggcca cctcggtggt cgtcgactcc gagggcggcc
      121 ggaccgagca tccctgcacc cacgtgatct cgtcgatgcc catctcctcg ctcatccggg
      181 ccatggatcc ccccgccccg gccgaggtgc tggcggcggc caacgggctc gcctaccgcg
      241 acttcctcac cgtggcgctg gtggtgccgg aggcggcggg cttccccgac aactggatct
      301 acgtccactc ccccgaggtg cgcctcggcc ggatccagaa cttcgggtcg tggtcgccct
      361 acctggtcaa ggaaggccgg acctgcctcg gcctggagta cttcgtgttc gagggtgacg
      421 acctctggcg cgccgacgac gccgacctcg tcgagctcgg caagcgggag ctggagaaga
      481 tcggcctcgt caaggcgagc gacgtcgagg ccggctacgt ggtgcgcatg cccaaggcct
      541 atcccgtcta cgacgagacc taccgggcca acgtcgagac catgcgggcc tggctggagg
      601 ccaacgccac caacgtgtat ccggtgggcc gcaacggcat gcaccgctac aacaaccagg
      661 accactcgat gtacaccgcc atgctctcgg tcgagaacat cttcggcgct caccatgaca
      721 tctggaacgt caacgtcgaa gaggagtacc acgaggagaa gacgctcgac gtccgggagg
      781 gcgggggcgg cgagcacggc accggccggg cggcgccgat caccccccgg cgggcggcca
      841 ccgaggtcgt catccccgac gaggccgggg tcgacgccgg ctgacccggc cgccgcggcg
      901 caccggcgcc gctaccgcga cggcactttc cagacgatga cggtgccgtc gtcggccagc
      961 acgggcaggt ggaggccggc cagataggcc tcggcccggg gccgcggctg gtcgcggtgg
     1021 tagacgacgt agccgatgcc cgcctgcgcc aggtcggcga cgccgaacgt cgtggggtag
     1081 ccggggtcct ccggcgcctg gagatccatg acctcttcgt agagcgggtc ggtgaggatc
     1141 atccgcagcc ggcgctcggg gtagcgggcc accatgccgc cgaccagcgg cttgccgtgg
     1201 cgcacggcgt cgtacatcgc aatcgtgtga tcgccgttgg tgtcgccgaa ctcgccgaac
     1261 cccgtccgcc actgcagcgg cacttccagc acggcccgct gcccggggtc ggcggcgatg
     1321 gcggcgtagg gccgggggac ggccgtcttc tgcagcggga tcgtggccgg ataggactcg
     1381 accaggacga aggcgagggc ggcgatcggc acggcgaccg cccagcgccg gttccggcgg
     1441 cccgccagca ccgacaaccg ggccaccgcc accgcggcga ggacatcgag ggccagggcg
     1501 cccatgatgg agaaccgccc ggggacccgc acgccgttca cgacggggac gaagtggagc
     1561 acgaagtacg gcaacgggac ggcgaagcgg gcgccgtagg ccgagaacca gccgcccgtc
     1621 cggccggcca cgtgcaggaa gggcccgagc gacagcacga cgaacacgcc ggtgagggcc
     1681 agccacagcc gatgccggcc cgcatggcgc cgcaccagaa cgaaggccac cagcaggagg
     1741 acgacggcgc cggggaaggc cagccgttcc ccgccggtgg tggccgccag ccggccgacg
     1801 tgcgtggccc agacccgctg ctgcaccgtc ggtgtgaccc aggagaagag gtccgaggag
     1861 tagttgtcgg cgttggccca gttggtcagc gggtcgagcg agtgggagaa caacagctcc
     1921 cgcagcatgg cggcgaggag cggggcggcg acgacgaggg cggtggcgac ggcctgaccg
     1981 aggcggacgg ccatgtcccg ggtgagcgtc gtccgccagt gccaggcggc gatcaccgcc
     2041 gaggccacca ggaggaacac gacgtagtag aggtcggtga ggaacgtcag cccgacgacc
     2101 gcgccgtagg ccagggcccg accccgcgac ggccgctcgt agagccgcag cagggccagc
     2161 aggccgaagg gcaggaactc gaggtgggcg aggtcgtagt gggagaggtg ggcgaagcgg
     2221 tagggggcga acgtgaaggc cgccccggcg acgaacgccg cccgccggtc cccggtcaca
     2281 tggtcggcca ggaggtaggc gccgaagccc gacaacacga ccgctccgag ctgcatcagg
     2341 ttggccgcca ccccgaggcc gaacaacttc tggagcggcc aggacagcac cgccaccagc
     2401 ggcatgttgg tgttgaaggc ggtgagcgcc cccaccgggt agaagaggtg gtcggtggcg
     2461 aaggggttgt ggcccgagaa cagggcatgg ggcagcgccc agaggttcca gaggtaggcc
     2521 gccccgtccg cgccgtcgga gaggatccgg gtcggcagat gggccaccac cggccagaag
     2581 aacaccgcgg tgagcacagt gaagccgagg aacgccggcc cgtgcgagac gaccgcggcc
     2641 cgtacgccgc cggcgggttt tgccgccgcc tcctccggga cggccaccgc cggcgggtcg
     2701 gtgccgacgg cggaggtcat cgcggccggc ggcagacgac cacgaactcg ttgtagggga
     2761 agattcttcc caccggacgg gggaacggga acgaccgcct ggtgacgggc tcgaagccca
     2821 gccggcgccc gagcgccacc gccccgtcga agtcgacgaa ctcgacgtgg gtgggatcgc
     2881 tgcggaagcc ccgctcctgc ggagtgatga ggatgagcgc cccgtcgggc ttgaggaacg
     2941 ggacgtaggt ccgcagcagg tcctccgccg ccggccgcgc catgtgctcc accacgtggg
     3001 cgaggagcag cgaatcgaac gccgccgggc gggcccactc cgaggccagg aactcctcgg
     3061 gcaggaaggc ccgcagcccc cggctgcggc agtggcg
//
LOCUS       DATGJT010000657         2200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1021930, whole genome shotgun sequence.
ACCESSION   DATGJT010000657 DATGJT010000000
VERSION     DATGJT010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1021930"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /locus_tag="VKX24_11345"
     CDS             <1..1061
                     /locus_tag="VKX24_11345"
                     /inference="COORDINATES: protein motif:HMM:NF018657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004144 - diacylglycerol O-acyltransferase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="WS/DGAT domain-containing protein"
                     /protein_id="HLJ09126.1"
                     /translation="AKLHHSAIDGIAGAEATAALMDLEPVAVGDDPPSGLASEPVPSP
                     WQLVGSACRNAGRRVMPTTRLLARLPGTALRLGIRNRLLEGTPPPGFFTSPRTSLASR
                     LSRRRVAGVTRVDMADVEEVRQASGATVNDVILTLAASAMRLYLEERGELPAEPLCSF
                     VPVAVRADGEDPMRDVNRLSGMLVSLATDVDDPLRRLAVIAESARAAKDQHRVLGEDL
                     FSELAALGVPALLGPTGRLARGLGLTSRFPPFSVVVSSFAGPTFPLYCAGAELLAYHP
                     FGPVVDGAALNITAMSYRGQIGFGLLACAEAVPDVDLLARLIPESMTELTKAVSSPHH
                     RKAGASAPAAVVSARRSR"
     gene            complement(1039..1506)
                     /locus_tag="VKX24_11350"
     CDS             complement(1039..1506)
                     /locus_tag="VKX24_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018718467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HLJ09127.1"
                     /translation="MAQKFFVGDLEVSSSAFGPLGKIPERHTGDGPDVSPALEWTGAP
                     DGTRSFAVVCHDPDAPLVDGFTHWVLYGIPGEVRSLQEGTGDFVPGENNMGNQGYNGP
                     APPPGHGVHHYYFWVYALDTDLGLEPGLSRRALLDRIEDHVIEQARVIGIYEH"
     gene            1629..2006
                     /locus_tag="VKX24_11355"
     CDS             1629..2006
                     /locus_tag="VKX24_11355"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ09128.1"
                     /translation="MAGEGDCYILVAEDDESLRTTIAELLRTDQHHVVEAGDGEAALQ
                     VLRGQPFDVLVLDLHMPKMDGLQLLDTFDFPPPSVIVYSAFEYFDVKDVEGRLGTRIR
                     ESLQKPVAPDVLISAVETACSER"
BASE COUNT          327 a          776 c          756 g          341 t
ORIGIN      
        1 tcgccaagct gcaccattcc gccatcgacg ggatcgccgg agcagaggcc accgccgcgc
       61 tcatggatct cgagcctgtg gccgtcggcg acgaccctcc gagcgggctc gcgtcggagc
      121 cggttccgag cccgtggcag ctcgtgggga gcgcgtgccg taacgccggg cgtcgagtga
      181 tgcccaccac gcgtctgttg gcgcggctcc ccggcacggc gctgcgcctc gggatccgca
      241 atcgcctcct cgaggggacc ccgccgcccg gcttcttcac gagcccccgc acctcgctcg
      301 ccagccggct gagccggcgc cgagtcgccg gagtcacgag ggtcgacatg gccgacgtcg
      361 aggaagtgcg ccaggccagc ggcgccacgg tgaacgacgt catcctcacc ttggccgctt
      421 cggcgatgcg gctctacctc gaggagcggg gagagttgcc tgcggagccg ctttgcagct
      481 tcgtgcccgt cgcggtccgt gccgacggcg aggatccgat gcgcgacgtc aatcgcttgt
      541 cgggcatgct cgtgtccctg gcgaccgatg tggacgaccc ccttcggcgc ttggcggtca
      601 tcgccgaatc ggcccgggcg gccaaggacc agcaccgcgt cctcggcgag gaccttttct
      661 cggagctcgc cgcactcggc gtaccggcct tgctcggccc gaccggccgg ctggcgcggg
      721 ggctcgggct cacgtctcgg ttcccgccgt tcagcgtcgt cgtctcgagc ttcgccgggc
      781 cgaccttccc gctctactgc gccggcgccg agctgctcgc ctaccacccc ttcgggccgg
      841 tcgtcgacgg ggcggcgctg aacatcaccg ccatgtcgta ccgggggcag atcggcttcg
      901 ggctactggc ctgcgcggag gcggtaccgg acgtcgacct cctggcacgg ctcatcccgg
      961 agtcgatgac cgagctcacc aaggcggtgt cgagcccgca ccatcggaag gccggagcgt
     1021 cagccccggc cgcggtggtc agtgctcgta gatcccgatg acgcgggcct gctcgatgac
     1081 gtggtcctcg atgcggtcga gcaacgcccg cctgctgagc ccgggctcga gaccgaggtc
     1141 ggtgtcgagg gcgtaaaccc agaagtagta gtggtggaca ccatggcccg gcggtggagc
     1201 cggcccgttg tagccctggt tccccatgtt gttctccccg gggacgaagt cgccggtccc
     1261 ctcctgcagg ctgcgcacct cgcccgggat gccgtagagg acccaatggg tgaagccgtc
     1321 gaccaagggg gcgtcggggt cgtggcagac cacggcgaac gaccgggtcc cgtcgggagc
     1381 cccggtccac tcgagtgctg gtgacacgtc gggcccgtcg ccggtgtggc gctcggggat
     1441 cttcccgagg gggccaaagg ccgacgacga cacttcgagg tctccgacga agaacttctg
     1501 ggccatgggg gcttcatacc ccacaggaag gccgaggacc agcacggccc acgctgggac
     1561 ctgcggcggc cctttcctat agcgttcggc cggcaccggc gaagagggac ggcgagaaga
     1621 gcgagccgat ggcgggcgag ggcgactgct acatcctggt agcggaggac gacgagagtc
     1681 ttcgcaccac gatcgccgag ttgctgcgca cggaccaaca ccacgtggtc gaggcaggcg
     1741 acggtgaagc ggcactccag gtgctccgcg gccagccgtt cgacgtgctg gtcctcgatc
     1801 tccacatgcc gaagatggac ggcctccagc tcctcgacac cttcgacttc ccacccccga
     1861 gcgtgatcgt ctactcggct ttcgagtact tcgacgtcaa ggacgtcgaa ggacgcctcg
     1921 ggaccaggat cagggagtct ctgcagaagc ccgtggcgcc cgacgtcctc atctccgctg
     1981 tggagacggc ctgtagcgag cgctgagccg gtctcgccga gggccggtgc ggcccctcaa
     2041 ctcgacctct cgcccacaac gcgcggatcg tggctgccaa gggccccctc ccgggctgga
     2101 taccgacgct ccgtggccaa tcaaccgact cccaacgtcc accctggaat ctcacaacag
     2161 gtggccgtat gatcgccctc aggggtcaag gggggggatt
//
LOCUS       DATGJT010000658         2624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_607113, whole genome shotgun sequence.
ACCESSION   DATGJT010000658 DATGJT010000000
VERSION     DATGJT010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607113"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1329)
                     /gene="glmU"
                     /locus_tag="VKX24_11360"
     CDS             complement(<1..1329)
                     /gene="glmU"
                     /locus_tag="VKX24_11360"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HLJ09129.1"
                     /translation="MPSEPSLAAIVLAAGFGKRFRSASTPKVLHRAAGEPLVAHALAA
                     VSGLPGLDRLIVVVGHGREQVTEAVLARFPGAEFVTQPVPRGTGDAVAVCEPALGGYR
                     GQVVVVSGDSPLITTETLASLVDTHRRAGAAVTALTALLDDPTGYGRVIREADGTIRI
                     VEQADAGPAELQVREVSMCFWCFEPEPLFPALAKVTTGNAQGEYYLPDVVPIIAGAGG
                     KVATFMATDVTEVLGVNDRRQLAEAAAHLRARKLDALMAAGVTIEDPAVTYVEARVEV
                     GPDTVLRPMTFLEGMTKVGSGCTIGPSARLVDTEVDDGAEVSFAVVKSARIGPEAQVG
                     PFTSLRPATRLGPKSKAGSFVEMKGSTVGAGSKVPHLSYIGDAEIGTGVNVGAGTITC
                     NYDGEAKIKSRTTIGDGVLIGSDTMLVAPVTVGDGAITGAGSVVTKDIEPN"
     gene            complement(1412..1482)
                     /locus_tag="VKX24_11365"
     tRNA            complement(1412..1482)
                     /locus_tag="VKX24_11365"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1448..1450),aa:Gln,seq:ttg)
     gene            complement(1718..>2624)
                     /gene="ispE"
                     /locus_tag="VKX24_11370"
     CDS             complement(1718..>2624)
                     /gene="ispE"
                     /locus_tag="VKX24_11370"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HLJ09130.1"
                     /translation="LFLAVGPRRADGYHDLITVMQSVDLADTVVLRRTLDAPGVTFAP
                     GAGYAGLLPEPPDLVARAIELCSTELRGVPPVAAEVTKQIPMAAGLAGGSADAAAAIL
                     GADALAGADTPRGRLEALCRRLGSDVPFCLRGGTALARGRGDQLSPMACRHRIWWVLG
                     ISGFPLSTADVYRRFDELGGSGGQGSTGGAGGAGATGDLGRPNRLADALAAGHPKAIA
                     PLLRNDLQAAAFDLAPDLAGQAEALEKAGALRAILTGSGPTIAGICRDEAHAEEVAAR
                     AESEFVRVELVASTPLGAEIVRREP"
BASE COUNT          365 a          923 c          984 g          352 t
ORIGIN      
        1 attgggttcg atgtccttcg tcacgacgct gccggcgccg gtgatcgcgc cgtcgccgac
       61 ggtgaccggg gcgaccagca tcgtgtccga cccgatgagc accccgtcgc cgatcgtggt
      121 cctcgatttg atcttcgcct cgccgtcgta gttgcaggtg atcgtgcctg ccccgacgtt
      181 gacgcccgtg ccgatctcgg cgtccccgat gtaggagagg tgcggcacct tggagccggc
      241 accgaccgtc gaccccttca tctcgacgaa cgagccggcc ttcgacttgg gccccagccg
      301 ggttgccggg cgcagcgacg tgaacggccc cacctgtgcc tcggggccga tgcgggccga
      361 cttgacgacc gcgaagctga cctcggcgcc gtcgtccacc tcggtgtcga ccagccgggc
      421 cgagggcccg atcgtgcagc cggaaccgac cttcgtcatg ccctccagga aggtcatcgg
      481 ccgaagcacg gtgtccgggc cgacctcgac ccgggcctcg acgtaggtga ccgccgggtc
      541 ctcgatcgtg acgccggcgg ccatcagggc gtcgagcttg cgagcgcgga ggtgggcggc
      601 ggcctcggcg agctggcggc ggtcgttgac cccgagcacc tcggtgacgt cggtggccat
      661 gaaggtggcg accttgcccc cggctccggc gatgatcggc accacgtcgg gcaggtagta
      721 ctcgccctgc gcgttaccgg tggtgacctt ggcaagggcc gggaagagcg gctccggctc
      781 gaagcaccag aagcacatcg agacctcgcg gacctgcagt tcggcggggc cggcgtcggc
      841 ctgctcgacg atgcggatcg tcccgtccgc ctcccggatc acccgcccgt agccggtggg
      901 gtcgtcgagc aacgcggtca gggcggtgac cgccgcccca gcccgacggt gggtgtcgac
      961 cagcgaggcg agagtctcag tcgtgatcag cggggagtca ccgctgacga cgacgacctg
     1021 gccccgatag ccgccgaggg ccggttcgca caccgccacc gcgtccccgg taccccgcgg
     1081 gacgggctgg gtgacgaact cggcgcccgg gaagcgggcg aggaccgcct cggtcacctg
     1141 ttccctgccg tggccgacga cgacgatcag ccggtcgagg ccgggaaggc cggagacggc
     1201 ggccagcgca tgggcgacca gcggctcgcc tgcggcccgg tggaggacct tgggggtgga
     1261 ggccgaacgg aagcgtttgc cgaacccggc ggcgaggacg atggcggcaa gggagggctc
     1321 cgacggcacg gccccaggat acgggatggg cgggcgctgt ctggtggcgg acccgtggtt
     1381 cacccgaggc gggtgccaga ccatcgaacg gctccgggag gaggattcga acctccactc
     1441 gcggctccaa aggccgttgt gctgccgtta caccatcccg gaattgccct ctggagaagg
     1501 aaaccacgcc cgacgggcaa ccgccgtcca ccggcaccct gagaacaatg gtgccaccgg
     1561 gcgcagcgcg gcgttgctgc cggattcggc atcgtagcgc ccattcttgg catctgagag
     1621 ctggaatacg cacttcaaat gccaaggttc gtcggcgccg ccgggcggcc ggatggaaac
     1681 ggtccagtcc ggcccggtgc aacgaggtcc ctgccggtta cggctcccga cggacgattt
     1741 ccgctccgag cggggtgctg gcgaccagct cgacccggac gaactccgac tcggcccggg
     1801 cggccacctc ctcggcgtgg gcctcgtccc ggcagatccc ggcgatggtc ggcccgctgc
     1861 cggtgaggat cgcccggagc gccccggcct tctccagcgc ctcggcctgc ccggccaggt
     1921 cgggggccag gtcgaaggcg gcggcttgga ggtcgttgcg cagcagtggt gcgatcgcct
     1981 tggggtggcc ggcggcgagg gcatcggcga gccggttggg ccggcccagg tcgccggtgg
     2041 cgcccgcccc gcccgccccg ccggtgctgc cttggccccc gctgccgccc agctcgtcga
     2101 atcggcggta gacgtcggcg gtggagaggg ggaatccgga gatgccgagc acccaccaga
     2161 tccggtggcg gcaggccatc ggggagagct ggtcgccccg gccgcgagcc agcgccgtcc
     2221 ccccgcggag gcagaacggc acgtcgctgc cgagccggcg gcacagcgcc tcgagccgcc
     2281 cccgtggggt gtcggctccg gccagggcgt cggcgccgag gatggcggcg gcagcgtcgg
     2341 cgctgccccc agcgagcccg gcggccatcg ggatctgctt ggtcacctcg gcggcgaccg
     2401 gcgggacgcc gcgcaattcg gtcgaacaca gctcgatcgc ccgggcgacg aggtcgggtg
     2461 gctcgggcag gagcccggcg tagcccgccc cgggggcgaa ggtcacgccc ggcgcgtcga
     2521 gggtccggcg gagcaccacg gtgtcggcca ggtcgaccga ctgcatcacg gtgatcaggt
     2581 cgtggtaccc gtcggcacgg cggggcccca ccgcgaggaa gagg
//
LOCUS       DATGJT010000659         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1128690, whole genome shotgun sequence.
ACCESSION   DATGJT010000659 DATGJT010000000
VERSION     DATGJT010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128690"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1730)
                     /locus_tag="VKX24_11375"
     CDS             complement(<1..1730)
                     /locus_tag="VKX24_11375"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLJ09131.1"
                     /translation="MWVHDADTLRLLAVNEAAVRQYGWSRAELLSKTVLDLMLPEDRP
                     GFLEQLLAGSAAGTLSAPVRRRHTARDGGLLTVDVQTEATTFAGRRATLTLARDVTER
                     EQLRAALRTTGDQLREAQAVAKVGIWDWDIGADQVRWSDELYRIFGLTPEVFPATFDG
                     YVSAVHPDDRDLVVATVERSLRTLEPFEFAHRAVTPGGSIRWLQCRGRVRGVDGRPVQ
                     MTGACQDVTTQRQAAEALSKLALHDPLTALPNRTLFMDRLGQALCRLDRRDRVLAVLF
                     VDLDRFKAINDRLGHAAGDEVLMAVGGRLREVLRPDDTVARLGGDEFVVLCEDLDDDR
                     AALRVAERVLAALDRPVACGDQEVVSSASIGIAVTRRSDATPDALLRDADMAMYRAKE
                     TGRHRIEVFDNTARLRTQARIQTADELRQAVDADQLRVVYQPIVHLGQATPAGVEALV
                     RWQHPRRGLLTPAEFIQLAEDTGLVVPLGAWVLRQACRDLTRTLDQGGLGGLSQLVVS
                     VNLSARQLSMPGLLPMVESVLAEFGLPAWRLCFEITESVLMEDVDLAIAVLSDLRALG
                     VRLAIDDFGTG"
     gene            complement(2099..>2344)
                     /locus_tag="VKX24_11380"
     CDS             complement(2099..>2344)
                     /locus_tag="VKX24_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018600748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HLJ09132.1"
                     /translation="EVQGYGRQGGKSEVFRGAEYAVAFVPKVKIEVLVDTADVDQVID
                     LIVKTGRTGKIGDGKVWAVPVDRLVRVRSGESGTDAL"
BASE COUNT          321 a          825 c          888 g          310 t
ORIGIN      
        1 ccggtgccga agtcgtcgat ggccaggcgc accccgagtg cccggaggtc ggagaggacg
       61 gcgatggcca ggtcgacgtc ctccatgagg acgctctcgg tgatctcgaa gcacagccgc
      121 caggccggca ggccgaactc ggccagcacg ctctccacca tcggcagcag gccgggcatg
      181 ctcagctggc gggccgacag gttgaccgac accaccagct gcgagagccc accgaggccg
      241 ccctggtcga gggtccgggt gaggtcgcgg caggcctggc ggagcaccca ggcgccgagc
      301 ggcaccacca ggccggtgtc ctcggccagc tggatgaact cggccggggt cagcaggccc
      361 cggcggggat gctgccagcg gacgagcgcc tcgaccccgg ccggggtggc ctggccgagg
      421 tgcacgatcg gctggtacac gacccggagc tggtcggcgt cgaccgcctg gcggagctcg
      481 tcggcggtct ggatgcgggc ctgggtccgg agtcgggcgg tgttgtcgaa gacctcgatg
      541 cggtgccggc cggtctcctt ggcccggtac atggccatgt cggcgtcgcg cagcagggcg
      601 tcgggcgtgg cgtcggaccg gcgggtgacg gcgatgccga tgctggccga ggagacgacc
      661 tcctggtcgc cgcaggccac cggccggtcg agggccgcca gcacccgctc cgccacccgg
      721 agggcggccc ggtcgtcgtc gaggtcctcg cagaggacga cgaactcgtc gccgccgagg
      781 cgggccacgg tgtcgtcggg ccggagcacc tcgcggaggc gtccgccgac ggccatcagc
      841 acctcgtcgc cggcggcgtg gccgaggcgg tcgttgatgg ccttgaaccg gtcgaggtcg
      901 acgaagagga cggcgaggac gcggtcgcgg cggtcgaggc ggcacagcgc ctggccgagc
      961 cggtccatga acagcgtccg gttgggcagc gccgtcaacg ggtcgtgcag cgccagcttg
     1021 gacagcgcct ccgccgcctg ccgctgcgtc gtgacgtcct ggcaggcgcc ggtcatctgc
     1081 accgggcggc cgtcgacacc ccggacgcgg ccccggcact ggagccagcg gatcgagccg
     1141 ccgggggtga cggcccggtg ggcgaactcg aacggctcca gcgtccgcag gctgcgttcc
     1201 accgtggcca cgacgaggtc gcggtcgtcg gggtggacgg cgctcacgta accgtcgaag
     1261 gtcgccggga acacctcggg ggtcagaccg aagatgcggt acagctcgtc ggaccagcgg
     1321 acctggtcgg caccgatgtc ccagtcccag atgccgacct tggccaccgc ctgcgcctca
     1381 cggagctggt cgcccgtcgt gcgcagggcg gcccgcagct gctcccgctc ggtgacgtcg
     1441 cgggccagcg tcagcgtcgc ccgccggccg gcgaaggtgg tggcctcggt ctggacgtcg
     1501 accgtgagga ggcccccgtc ccgtgcggtg tgccggcggc ggaccggcgc cgacagcgtc
     1561 cccgccgccg agccggccag gagctgttcg aggaagcccg gccggtcctc cgggagcatc
     1621 aggtcgagca cggtcttcga cagcagctcg gcgcgggacc agccgtactg ccggacggcc
     1681 gcctcgttga cggccagcag ccgcagcgtg tcggcgtcgt ggacccacat ggccgagggg
     1741 ttggcgtcga acagcagtgc cgcgcccgcg gccggcccgg cccaggccgc gcccgagccg
     1801 ggttggaagc cctcgtccgt tacagggccg ttggacgcgg tcttcgggat gacccctcca
     1861 aagggaatac gggcacgcga ccggggtacg gcggcgatcg ccgaccctct ttgggaatga
     1921 tcggtcccgg tatgtccccc gccaatgacc cgggggcgcc atttcccggc gacgtccgga
     1981 ctagtcagcg gcgattcggc cgaaatgccc aggcgcccga gggagatcgc ctcgcggcgt
     2041 cgtgcctgac cacgaccggt cgtggttcgg aacagcgctg gaacgatctc tggaaggcct
     2101 acagggcgtc ggtgccggat tctccgctgc ggacccggac gaggcggtcg accgggacgg
     2161 cccagacctt gccgtcgccg atcttgcccg tccggcccgt cttcacgatg aggtcgatga
     2221 cctggtcgac gtcggcggtg tcgacgagga cctcgatctt caccttgggg acgaaggcga
     2281 cggcgtactc ggcgccccgg aacacctcgc tcttgccgcc ctggcggccg tagccctgga
     2341 cctc
//
LOCUS       DATGJT010000660         2854 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_607147, whole genome shotgun sequence.
ACCESSION   DATGJT010000660 DATGJT010000000
VERSION     DATGJT010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607147"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2742
                     /locus_tag="VKX24_11385"
     CDS             <1..2742
                     /locus_tag="VKX24_11385"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ09133.1"
                     /translation="VVFCAVILVALLVRRRDRSRAEAADESSWSLTGRARPLPAAVAA
                     LPEVRLARAALVAAVAGVAVLVPLWASPSQTNRVSATLILAMAALSLVVLTGWSGTVS
                     LGQAGLVGVGGVVAANLIAKANLDLFLTIAASAAAGAAVAVLIGLPAFRVKGMFLAVT
                     TLAFAVAMESYIVNPTNFRHWIPSGYDRPVLWKHLDLAGERPMYYLCLAALVAVALVV
                     HAAQRTRTGRVLRATRDNPRAAAAMAVPTARVQLTGFELAGVIAGGAGALHATLLRGV
                     GYQTYPVATSILVFSMAVIGGISSLAGTLIGVGFVQALVLAVPRLALVVTGAALLVVL
                     YAAPGGIGQALERLRDAAVRRLARRRGIELVEASADGSAAVLRSPSPDMGGPATREGS
                     VLHVDGLTAAYGPLQVLFGVDLDVAEGEIVALLGTNGAGKSTVLRAVAGLVPGTGGTV
                     RLDGAELRGVPTDRIAASGLALMPGGRGVFPTLTVDDNLRLATWLLRSDPVKAAAARE
                     EMLDLFPALRERLPVMAGNLSGGEQQMLSLAMAFVTRPRVLCIDELSLGLAPAVVGQL
                     CDRVRDIHAAGTTVVLVEQSVDVALLLAERAVFLEKGEVRFRGRTAGLLGRPDLLRSV
                     FIGTGGAAPRSFGHLAGTVPDKCPNVRGAGLTCRAITRRFGGVTALDAVDLDVAPGAA
                     VGIIGHNGAGKTTLFDVISGFLPPDSGRVLVGGIDVTDRPPHRRAIAGLGRSFQEARL
                     FPSLTVAETVAVALERHLPNRDTLAAALALPASTYMEAAVAERVDELLALLGLTGYRH
                     HRTADLSTGTRRIVELACVLAQDPAVLLLDEPSAGVAQRETEALAPLLRRVRAATGCT
                     LVIIEHDMGLIASVCDELVALEFGAVIASGAPADVLGHRRVIASYLGGELRQTAVDA"
BASE COUNT          312 a         1093 c         1026 g          423 t
ORIGIN      
        1 gtcgtgttct gcgccgtgat cctcgtggcg ctgctcgtcc gccggcgcga ccggagccgg
       61 gccgaggccg ccgacgagtc gtcctggtcg ctcaccggcc gtgcccgccc gctgccggcg
      121 gcggtcgccg cgctgcccga ggtccgcctc gcccgggcgg cgctggtggc cgccgtggcc
      181 ggcgtcgccg tcctcgtgcc gctctgggcc agccccagcc agaccaaccg ggtcagcgcc
      241 acgctcatcc tcgccatggc ggcgttgtcg ctggtcgtcc tgaccggctg gagcgggacg
      301 gtgagcctgg gccaggccgg cctcgtcggc gtcggcgggg tggtggcggc caacctcatc
      361 gccaaggcca acctcgacct gttcctgacg atcgccgcct cggccgccgc cggcgcagcg
      421 gtggcggtgc tcatcgggct gccggccttc cgggtcaagg gcatgttcct ggccgtcacc
      481 acgctggcct tcgccgtggc gatggagtcc tacatcgtca acccgacgaa cttccggcac
      541 tggatcccgt ccggctatga ccggccggtg ctgtggaagc acctcgacct ggccggtgag
      601 cgccccatgt actacctgtg cctggcggcg ttggtggcgg tggccctcgt cgtccacgcc
      661 gcccagcgga cgaggacggg ccgggtgctg cgggcgacac gcgacaatcc ccgggcggcg
      721 gcggccatgg ccgtccccac cgcccgggtg cagctgaccg gcttcgagct ggccggcgtc
      781 atcgccggcg gggccggagc gctgcacgcc acgctgctgc ggggcgtcgg ctaccagacc
      841 tacccggtgg ccaccagcat cctggtcttc tccatggcgg tgatcggcgg gatctcctcg
      901 ctggccggga cgctgatcgg cgtcgggttc gtccaggcgc tggtgctggc cgtcccccgc
      961 ctggccctcg tcgtcaccgg ggcggcgctg ctggtcgtgc tctacgccgc tcccggcggg
     1021 atcggccagg cgctggaacg gctgcgggac gccgccgtcc gccgcctggc ccgccggcgg
     1081 gggatcgagc tggtcgaggc cagcgccgac ggctcggcgg ccgttctccg gtcaccaagc
     1141 cccgacatgg gcggtccggc gaccagagaa ggctccgtcc tccacgtgga cggcctgacc
     1201 gccgcctacg gaccgctgca ggtgctcttc ggcgtcgacc tcgacgtcgc cgagggcgag
     1261 atcgtggcgc tgctcggcac caacggcgcc ggcaagtcga cagtgctgcg agcggtggcc
     1321 ggcctcgttc cgggcaccgg cggcacggtg cgactcgacg gtgccgagct ccgcggcgtg
     1381 ccgaccgacc gcatcgccgc ctccggactg gccctcatgc ccggcgggcg gggcgtgttc
     1441 cccacgctga cggtcgacga caacctccgg ctggccacct ggctgctgcg ctccgacccg
     1501 gtgaaggccg ccgccgcccg ggaggagatg ctcgacctgt tcccggccct gcgggaacgg
     1561 ttgcccgtca tggccggcaa cctctccggc ggcgagcagc agatgctgtc gctggccatg
     1621 gccttcgtga cccggcccag ggtgctgtgc atcgacgagc tgtcgctggg cctcgccccg
     1681 gccgtggtcg gccagctctg cgaccgggtg cgcgacatcc acgccgccgg caccaccgtc
     1741 gtgctggtcg agcagtcggt cgacgtcgcc ctcctgctgg ccgagcgggc ggtgttcctg
     1801 gagaagggcg aagtccgctt ccggggccgg accgccggcc tgctgggccg tcccgacctg
     1861 ctccgctccg tcttcatcgg gaccggcggg gcggcgccga ggagctttgg acatttagcg
     1921 gggactgtcc ccgacaaatg tccaaacgtc aggggcgccg gcctgacctg ccgggcgatc
     1981 acccgccgct tcggcggcgt caccgccctc gacgccgtcg acctcgacgt cgcccccggc
     2041 gcggcggtgg gcatcatcgg ccacaacggc gcgggcaaga ccacgctgtt cgacgtcatc
     2101 tcgggtttcc tgcctccgga ctccggacgg gtgctcgtcg gtgggatcga cgtcaccgat
     2161 cgcccgcccc accgccgggc gattgccggt ctcggccggt cgttccagga ggcccggctg
     2221 ttcccgtcgc tgacggtggc cgagaccgtg gccgtggccc tggagcggca cctgcccaac
     2281 cgcgacacgc tggccgccgc cctggccctg ccggcttcga cctacatgga ggccgccgtc
     2341 gccgaacggg tcgacgagct cctcgccctc ctcgggctca ccggctaccg ccaccaccgc
     2401 accgcggacc tgtcgaccgg cacccggcgg atcgtggagc tggcctgcgt gctggcccag
     2461 gaccccgccg tcctgctcct cgacgagccg tcggccggcg tcgcccagcg ggagaccgag
     2521 gcgctggcac cgctgctccg gcgggtccgg gcggccaccg gctgcaccct ggtcatcatc
     2581 gagcacgaca tgggcctcat cgcctcggtc tgcgacgagc tggtggcgct ggagttcggc
     2641 gccgtcatcg cctccggcgc cccggccgac gtgctggggc accggcgggt catcgcctcc
     2701 tacctcggcg gcgagttgcg ccagactgct gtggatgcct gagcagaagg agtccgtacc
     2761 gcgcaagcgg ttgacgcgcc aggagagcca ggcccgcacc cgggccctgc tcctcgaggt
     2821 ggccgagacc gagttcctgg cccagggcta cgcc
//
LOCUS       DATGJT010000661         2245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_90734, whole genome shotgun sequence.
ACCESSION   DATGJT010000661 DATGJT010000000
VERSION     DATGJT010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90734"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..991
                     /locus_tag="VKX24_11390"
     CDS             77..991
                     /locus_tag="VKX24_11390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013115836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease"
                     /protein_id="HLJ09134.1"
                     /translation="MAGDLTLLVDASSLLYRAYFSTPDSVRAPDGTPINAAHGFLGML
                     ARLVADHDPARLACAVDEDWRPAWRVGLVPEYKAARVASVAPAQQVAADDEVGRQSVY
                     VFKLLEGLGVAVVGFEACEAEDVIGTLAEREAARPGTRVAIVSGDRDLYQLVRDPEIY
                     VLYPVKGVTEMLRVDEAEVTRRYGIPGRAYADFAVLRGDPSDGLPGVKGIGEKTAASL
                     VKTYGSLDEIVAAAREGAGAGALSRVAAHLDFVERARKVVAIPRDLPLPDVDLDRPRK
                     PPIPEVTALAEALGLTGALGRLSAALAG"
     gene            1092..1823
                     /locus_tag="VKX24_11395"
     CDS             1092..1823
                     /locus_tag="VKX24_11395"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HLJ09135.1"
                     /translation="MASGAELVHDIPASVLAVYGHPDDPEISAGGTLARWARGGATVW
                     ELICTRGEKGSQDPNQDRDALAATRIAETEKAATVLGLAGHFHLDYGDGELRDDLEIR
                     ARIVELVRKLRPEVVVCPDPTAVFFGDRYFNHSDHRVTGWATLDAVAPAAGNPHYFPE
                     QLAAGLAVHPVAAVYLSGTLEPNCWVDIGADIETKIDALFCHESQLVETGEWFREFLR
                     QRAEEGGRAAGVRYAEGFRRLTLGP"
     gene            complement(1886..2173)
                     /locus_tag="VKX24_11400"
     CDS             complement(1886..2173)
                     /locus_tag="VKX24_11400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09136.1"
                     /translation="MNRPGPGLPPDDGEHPYAASRGALIAAFLAVVVAGLSGAAIGYA
                     LVGIGCTGDCSTVSGLGALFGGLVAAGGVAIVAVLLLRSLAEWKAGGIRRS"
BASE COUNT          306 a          847 c          811 g          281 t
ORIGIN      
        1 ggctcgtcac ccacaaagac gtcgacgacg ccgacctcga ccgggcgctg gccgccatcg
       61 ccaaatcggg ccgctgatgg ccggcgatct caccctgctc gtcgacgcct ccagcctcct
      121 ctaccgggcc tacttctcca cgcccgactc ggtgcgggcc cccgacggca cgccgatcaa
      181 cgccgcccac ggcttcctcg gcatgctggc ccggctcgtc gccgaccacg acccggcccg
      241 gctggcctgc gccgtcgacg aggactggcg gccggcctgg cgcgtcgggc tcgtcccgga
      301 gtacaaggcc gcccgggtgg cgtcggtggc gccggcccag caggtggcgg ccgacgacga
      361 ggtcggccgg cagtcggtct acgtgttcaa gctgctggag ggcctcggcg tggcggtggt
      421 cggcttcgag gcctgcgagg cggaggacgt catcggcacg ctggccgagc gggaggcggc
      481 ccgccccggc acccgggtgg ccatcgtctc cggcgaccgc gacctctacc agctggtgcg
      541 ggaccccgag atctatgtcc tctacccggt gaagggcgtc acggagatgc tccgcgtcga
      601 cgaggccgag gtgacccggc gctacgggat cccgggccgg gcctacgccg acttcgcggt
      661 gctccggggc gatccgtcgg acgggctgcc cggcgtgaag ggcatcggcg agaagaccgc
      721 cgcctcgctg gtcaagacct acggcagcct cgacgagatc gtggccgccg cccgggaggg
      781 agccggcgct ggtgcgctgt cccgggtggc ggcccacctc gacttcgtgg agcgggcccg
      841 gaaggtggtg gccatccccc gggacctgcc cctgcccgac gtcgacctcg accggccccg
      901 caagccgccg atcccggaag tgacggcgct ggccgaggcg ctgggcctga ccggcgcgct
      961 cggtcgcctg tcggccgcct tagcgggcta acgcccgctc cggcctgttt ctggcggcgg
     1021 gcccctgccc tccgggcatc ccgccgcggt gccgtggggc ccaaccccac ggccggtagg
     1081 gtgatcggcc gatggcttcc ggcgccgaac tcgtccacga catcccggcc agcgtcctgg
     1141 cggtctacgg ccaccccgac gaccccgaga tctcggccgg cggcacgctg gcccgctggg
     1201 cccggggtgg ggcgacggtg tgggagctga tctgcaccag gggcgagaag ggctcgcagg
     1261 acccgaacca ggaccgggac gccctggccg ccacccggat cgccgaaacg gagaaggccg
     1321 ccaccgtcct cggcctggcc ggccacttcc acttggacta cggcgacggc gagctgcgcg
     1381 acgacctcga gatccgggcc cggatcgtgg agctcgtccg gaagctccgg cccgaggtcg
     1441 tcgtgtgccc cgacccgacg gcggtgttct tcggcgaccg ctacttcaac cactcggacc
     1501 accgggtgac gggatgggcg acgctcgacg ccgtcgcccc cgccgccggc aacccccact
     1561 acttccccga gcagctggcc gccggcctcg ccgtccaccc cgtggccgcg gtgtacctct
     1621 cgggcacgct ggagcccaac tgctgggtcg acatcggcgc cgacatcgaa acgaagatcg
     1681 acgccctgtt ctgccacgag agccagctgg tggaaacggg ggagtggttc cgggagttcc
     1741 tccgccagcg ggccgaggag ggcggccgcg ccgccggcgt ccgctacgcc gaaggcttcc
     1801 gccgcctgac cctcgggccc tgacccaaac cggcgttcgt ttaccggaat acagcggaaa
     1861 aggaacgccg gttgggagtg gcgcgtcagg agcggcggat cccgccggcc ttccactcgg
     1921 ccagggagcg cagcaggagg acggcgacga tggccacgcc gcccgccgcc accagcccgc
     1981 cgaagagcgc cccgagcccc gacaccgtgc tgcagtcgcc ggtgcagccg atgccgacga
     2041 gggcgtaccc gatggccgcc ccggagaggc cggccacgac gaccgccagg aaggcggcga
     2101 tcaacgctcc ccggctggcg gcgtagggat gctcgccgtc gtcgggggga aggccggggc
     2161 ccggtcggtt cacagcgggc atcgtaacgg tgccctgggc cgtcagaccc ccgctgtagc
     2221 gtggacggcg accatgaaga cgctc
//
LOCUS       DATGJT010000662         3485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_500677, whole genome shotgun sequence.
ACCESSION   DATGJT010000662 DATGJT010000000
VERSION     DATGJT010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500677"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..926)
                     /locus_tag="VKX24_11405"
     CDS             complement(<1..926)
                     /locus_tag="VKX24_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017572260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ09137.1"
                     /translation="MTEPLWVPSEERRQKAQLTRYRQWLAETHGLRFAVGDYQSLWRW
                     SVDELEDFYASVWEYFAVDADPGYDAVLGRREMPGAEWFPGARLNYAHHVFRGKTDDE
                     VAVRFASERAGPESWTWGDLRARTAALAAGLRNAGVGPGDRVAAYLPNIPEALAAGLA
                     VMSLGAIWSACSPDFGVRSVVDRFAQIEPAVLLAVDGYRYGGRDHSRLGEVRSLQEAL
                     PSLRRTVLLRHLDRRADVSGLRDTVLWEYFEEPGTTLQFENVPSDHPLWVVYSSGTTG
                     LPKPIVHSHGGMLVDQLKYGHFHFDAKAGDRL"
     gene            complement(927..1958)
                     /locus_tag="VKX24_11410"
     CDS             complement(927..1958)
                     /locus_tag="VKX24_11410"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ09138.1"
                     /translation="MPKIKFGIFPCTEDYPDGKEMVRVYEEIVAEAKLAEQVGFDSCM
                     ITEHHQQPDGYFPNPLVVATGIARETTTLKVGTCVALAPLYHPVRLAEDTALLDVISN
                     GRLQLGLGAGYVDADLDAFGVDMSQRGVLFDDTVRFIKQAWTESNLTFKGEHYTFENV
                     NVTPKPVQKPRPQIWCAAWTPQGLRRAGRIGDRWITDVINTLPTFNMFADIYRNSAKE
                     NGQTPGITVLRECWVAPTTDQAVEEYGPYVMTSHRFYYEVGGYNEQVDPWIKDLKSAD
                     EFTLEKVATDRFIMGSPEDCIEQIEKWNRDLGTDYFVMRFRHPNGPEHKKVLDAIRLF
                     GEKVIPHFA"
     gene            complement(2086..3099)
                     /locus_tag="VKX24_11415"
     CDS             complement(2086..3099)
                     /locus_tag="VKX24_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLJ09139.1"
                     /translation="MTRPRVVDLHSHVATPACLALVEGLVPPLPLADPFAFWSNEETK
                     AYNAGHFAAIVPQLTDPERRLRDMDRMGVDVQALSVAPPQYYYWADPELGRRLARQQN
                     EHLAELVAGRPDRFVGLATVPLQDVDAAVAELDHAVGPLGLRGVEICTNVNGLDLDDR
                     RFRPFFARAAELGVVVLLHPHGFTDGRRLMDYYLTNVIGNPLESTIALARLIHGGVLE
                     ELPALRLCVVHGGGFLPFYASRMDHAWRHRPEGRHHIPDRPPSSYLRRIWVDCLVYDP
                     AHLAFLVAQMGPERVVVGTDYPFDMGDDDPVGLIGATPGLSDEDRARILGGNAAGLLG
                     FDR"
     gene            complement(3096..>3485)
                     /locus_tag="VKX24_11420"
     CDS             complement(3096..>3485)
                     /locus_tag="VKX24_11420"
                     /inference="COORDINATES: protein motif:HMM:NF024945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ09140.1"
                     /translation="RLAAGALDLVGRAGQRDRVVALADLGVYRLLLQVKRPEELIDFM
                     HGVLRPLRDYDGRRDTTLVETLRAFLAHGFSVTATAEALFVHPNTISYRLRRIEEVLG
                     VNCHDPQALLQVQLAFLIEGVLGDPAS"
BASE COUNT          503 a         1198 c         1279 g          505 t
ORIGIN      
        1 aacagccggt cgccggcctt ggcgtcgaag tggaagtggc cgtacttcag ctggtcgacg
       61 agcatcccgc catgggagtg gacgatgggc ttcggcagcc cggtcgtgcc cgacgagtac
      121 acgacccaca gcggatggtc cgacggcacg ttctcgaact gcagcgttgt gccgggttct
      181 tcgaagtact cccacaggac ggtgtcgcgc agccccgaca cgtcggcccg gcggtcgagg
      241 tggcgcaaca gcaccgtccg ccgcagcgac gggagcgcct cctgcagcga ccgcacctcg
      301 cccagccggc tgtggtcccg cccgccgtag cggtacccgt ccaccgccag cagcaccgcc
      361 ggctcgatct gggcgaagcg gtcgaccacg ctgcggacgc cgaagtccgg tgagcaggcc
      421 gaccagatcg ccccgaggct catcacggcc aggccggcgg ccagcgcctc ggggatgttg
      481 ggcaggtagg cggccacccg gtcgccgggc ccgacgccgg cgttgcgcag ccccgccgcc
      541 agcgccgccg tccgggcccg cagatcgccc cacgtccacg actccggccc ggcccgttcc
      601 gaggcgaagc ggacggcgac ctcgtcgtcg gtcttccccc ggaagacgtg gtgggcgtag
      661 ttcagccggg cgccggggaa ccactcggcc cccggcatct cccgccggcc gaggacggcg
      721 tcgtagccgg ggtcggcgtc gacggcgaag tactcccaca ccgaggcgta gaagtcctcc
      781 agctcgtcga ccgaccaccg ccacagggac tggtagtcgc cgaccgcgaa gcggagacca
      841 tgcgtttccg ccagccactg gcggtaccgg gtgagctggg ctttctgcct ccgctcctcg
      901 gacgggaccc agagcggctc cgtcacctag gcgaagtgcg ggatgacctt ctcgccgaac
      961 agcctgatgg cgtcgaggac cttcttgtgc tccggcccgt tggggtggcg gaagcgcatg
     1021 acgaagtagt cggtgccgag atcccggttc cacttctcga tctgttcgat gcagtcctcg
     1081 ggggagccca tgatgaaccg gtcggtggcc accttctcca gggtgaactc gtcggccgac
     1141 ttcaggtcct tgatccaggg gtcgacctgc tcgttgtagc cgcccacctc gtagtagaag
     1201 cggtgggagg tcatgacgta ggggccgtac tcctcgacgg cctggtcggt ggtcggcgcc
     1261 acccagcact cccgcagcac agtgatcccc ggggtctgcc cgttctcctt ggccgagttg
     1321 cggtagatgt cggcgaacat gttgaacgtc ggcagcgtgt tgatgacgtc ggtgatccag
     1381 cggtcgccga tccggcccgc ccggcgcagg ccctggggcg tccacgccgc gcaccagatc
     1441 tggggccggg gcttctgcac cggcttgggg gtgacgttga cgttctcgaa ggtgtagtgc
     1501 tcgcccttga acgtcaggtt gctctcggtc caggcctgct tgatgaaccg aacggtgtcg
     1561 tcgaacagca cgccccgctg gctcatatcg accccgaagg cgtcgaggtc ggcgtcgacg
     1621 taccccgcgc cgaggccgag ctgcagccgg ccgttggaga tgacgtcgag gagggcggtg
     1681 tcctcggcga ggcggacggg gtggtagagc ggcgccaggg ccacgcacgt cccgaccttg
     1741 agggtggtcg tctcccgggc gatgccggtg gccaccacca gcgggttggg gaagtagccg
     1801 tcgggctgct ggtggtgctc ggtgatcatg caggagtcga agcccacctg ctcggccagc
     1861 ttggcctcgg ccacgatctc ctcgtagacc cggaccatct ccttgccgtc ggggtagtcc
     1921 tcggtgcagg ggaagatccc aaacttgatc ttgggcatcg gtctctcctt ccggcggcgg
     1981 gaaacgggcg gcccggcgac ggccgaccgt aggcggctcc gccgcgccgc tcaatgggga
     2041 agcacataac ctcaccgggc ggcggttgtg gctcggcaca acccctcagc ggtcgaagcc
     2101 gagcaggccg gcggcgttgc cgccgaggat ccgggcccgg tcctcgtcgg agaggcccgg
     2161 cgtggccccg atcaggccga ccgggtcgtc gtcgcccatg tcgaaggggt agtcggtccc
     2221 caccaccacc cgctccgggc ccatctgggc gaccaggaag gccagatggg ccgggtcgta
     2281 gacgaggcag tcgacccaga tgcggcggag gtagctgctc ggcggccggt cggggatgtg
     2341 gtggcggccc tcgggccggt gccgccaggc gtggtccatc cgggaggcgt agaagggcag
     2401 gaacccgccg ccgtgcacga cgcagagccg cagcgccggc agctcctcga ggacgccgcc
     2461 gtggatgagc cgggccaggg cgatcgtcga ctccagcggg ttcccgatga cgttggtcag
     2521 gtagtagtcc atgagccgcc ggccgtcggt gaagccgtgg gggtggagga ggacgacgac
     2581 gccgagctcc gccgcccggg cgaagaacgg ccggaagcgg cggtcgtcga ggtcgaggcc
     2641 gttgacgttg gtgcagatct ccacgccccg caggccgagc ggcccgacgg cgtggtcgag
     2701 ctcggccacg gcggcgtcga cgtcctggag cggcacggtg gccagaccga cgaaccggtc
     2761 gggcctcccg gccaccagct cggccaggtg ctcgttctgc tgccgggcca gccggcggcc
     2821 cagctccggg tcggcccagt agtagtactg cggcggggcg accgacagcg cctggacgtc
     2881 gacgcccatc cggtccatgt cccggaggcg ccgctccgga tcggtcagct gcgggacgat
     2941 ggcggcgaag tgcccggcgt tgtaggcctt cgtctcctcg ttgctccaga aggcgaacgg
     3001 gtcggccagc ggcagcggcg gcaccagccc ctcgaccagc gccaggcagg cgggggtggc
     3061 gacgtggctg tggaggtcga cgacccgggg ccgggtcacg acgccgggtc gccgagcacg
     3121 ccctcgatga ggaacgccag ctgcacctgc agcagcgcct gggggtcgtg gcagttcacc
     3181 ccgagcacct cctcgatgcg ccgcagccgg tagctgatgg tgttgggatg gacgaagagc
     3241 gcctcggcgg tggcggtgac gctgaacccg tgggccagga aggcccgcag cgtctcgacc
     3301 agggtcgtgt cccggcgccc gtcgtagtcg cgcaggggcc gcagcacgcc gtgcatgaag
     3361 tcgatcagct cctcgggtcg cttcacctgg agcagcaggc ggtacacccc gaggtcggcc
     3421 agggccacca cccggtcgcg ctgcccggcc cgcccgacga ggtcgagggc gccggccgcc
     3481 agccg
//
LOCUS       DATGJT010000663         2373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1228377, whole genome shotgun sequence.
ACCESSION   DATGJT010000663 DATGJT010000000
VERSION     DATGJT010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2373
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1228377"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VKX24_11425"
     CDS             <1..301
                     /locus_tag="VKX24_11425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09141.1"
                     /translation="RLAGRLGLRFTDETARFLAASNRPGDGYSTHRLWHEQVDGGRSR
                     LTAPERALVEATLARFSGVLPAPVREPYDEPAADPVADPVVRVRTTTGMARDVLR"
     gene            complement(214..696)
                     /locus_tag="VKX24_11430"
     CDS             complement(214..696)
                     /locus_tag="VKX24_11430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018657035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HLJ09142.1"
                     /translation="MDLPVDKLKLKDALSRAATFVHREVYRRTGGKVGAKIGATTMGL
                     LTTTGRKSGQPRTTPLNCTPDGERWLLVASYGGDDRDPQWFKNLQANPEATLQIGGET
                     FPVRATVAGPEEKQALWAKVVAAYKGYEGYQRKTSRAIPVVVLTRTTGSATGSAAGSS
                     "
     gene            complement(700..>2373)
                     /locus_tag="VKX24_11435"
     CDS             complement(700..>2373)
                     /locus_tag="VKX24_11435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09143.1"
                     /translation="ITGPPEDRRAVNTPDLDAAAQAVAVARGVCRKAAAHLAGLSAED
                     GRISVAKLDRHQVLAYDLAHATAGVEGAAVMCEYGAHGGLQARLACLFAAEAIADLVA
                     RLVGREAEWGVSAAELSPAGEFVAAHRAPEFAEDVAEEVARHGGGPAHLAEEFELVRD
                     TFHRFAADKVRPVAEEVHRKNLDIPEAVIGGLAEIGGFGLSVPEEYGGFAAGGESDYL
                     GMVIATEELSWGSLGVGGSLITRPEILTRALVRGGTEEQKKIWLPKIAAGEAMVGVMV
                     TEPDYGSDVANLKVSATPVEGGFKINGVKTWATFAGRANTLMLLARTDPDRSKGHKGL
                     SLFIVEKPEAPGHHFEFIQSDTTGGGSGRMEGRAIDTLGYRGMHSYEVSFEDWFVPAA
                     NLIGGEGGLGKGFYYQMEGFENGRLQTAARAVGLMQAAYEAALDYARERRVFDKSIFE
                     YQLTKAKIARMAAVIQGGRQFAYSVARLMARGVGALEASMVKAYVCRAAEWVTREALQ
                     IHGGMGYAEEFPVSRWFVDARVLSIFEGADETLCLRVIARRLAEQALEG"
BASE COUNT          303 a          861 c          855 g          354 t
ORIGIN      
        1 tcggctggcc ggccgcctgg gcctgcggtt caccgacgag acggcccggt tcctggccgc
       61 ctccaaccgt cccggcgacg gctactccac ccaccggctg tggcacgagc aggtcgacgg
      121 cggccgcagc cggctgacgg cgcccgagcg ggcgctggtg gaggcgacgc tggcccgctt
      181 ctccggggtg ctgcccgcgc cggtgcggga gccctacgac gagccggcgg ccgacccggt
      241 ggcggatccg gtcgtccggg tgaggacgac gacggggatg gcgcgcgacg tcttgcgctg
      301 atagccctcg tagcccttgt aggcggccac caccttggcc cacaaggcct gcttctcctc
      361 cgggccggcc acggtggccc gcaccgggaa cgtctcgccg ccgatctgga gcgtcgcttc
      421 cgggttggcc tggaggttct tgaaccactg cgggtcgcgg tcgtcgccgc cgtaggaggc
      481 gaccagcagc cagcgctcgc cgtcgggcgt gcagttcaac ggcgtcgtgc ggggctggcc
      541 gctcttgcgc ccggtggtgg tcagcagccc catggtggtg gcgccgatct tggccccgac
      601 cttgccgccc gtccgccggt agacctcccg gtggacgaag gtggctgccc gggacagcgc
      661 gtccttcagc ttcagcttgt cgacgggcag gtccacggct cagccctcca gcgcctgctc
      721 ggccagccgg cgggcgatga cccgcaggca cagcgtctcg tcggcgccct cgaagatcga
      781 caggacccgg gcgtcgacga accagcggga gacggggaac tcctcggcgt agcccatccc
      841 gccgtggatc tgcagcgctt cccgggtgac ccactcggcg gcccggcaga cgtaggcctt
      901 gaccatcgac gcctcgagcg ccccaacgcc acgggccatg agccgggcca cggagtaggc
      961 gaactgccgg ccgccctgga tgacggcggc catccgagcg atcttggcct tggtcagctg
     1021 gtactcgaag atcgacttgt cgaagacgcg gcgttcccgg gcgtagtcga gggccgcctc
     1081 gtaggccgcc tgcatgaggc cgacggcccg ggccgccgtc tgcagccggc cattctcgaa
     1141 gccctccatc tggtagtaga accccttgcc gaggccgcct tcgccgccga tgaggttggc
     1201 ggcggggacg aaccagtcct cgaagctcac ctcgtaggag tgcatgcccc ggtagccgag
     1261 ggtgtcgatg gcccggccct ccatccggcc gctcccgcca ccagtggtgt ccgattggat
     1321 gaactcgaag tggtggccgg gggcttcggg cttctcgacg atgaacagcg acaggccctt
     1381 gtggcccttg ctgcggtcgg gatcggtgcg ggccaggagc atcagcgtgt tggcccgtcc
     1441 ggcgaaggtg gcccacgtct tgacgccgtt gatcttgaag ccgccctcga ccggggtggc
     1501 gctgaccttc aggttggcga cgtcggagcc gtagtcgggc tcggtgacca tcacgccgac
     1561 catcgcctct ccggcggcga tcttcggcag ccagattttc ttctgctcct cggtgccgcc
     1621 ccgcaccagc gcccgggtca ggatctcggg ccgggtgatg agcgagccgc cgaccccgag
     1681 gctgccccac gacagctcct cggtggcgat gaccatcccg aggtagtcgc tctcgccgcc
     1741 ggcggcgaac ccgccgtact cctccgggac cgacagcccg aagccgccga tctcggccag
     1801 accgccgatg accgcttcgg ggatgtcgag gttcttccgg tgcacctctt cggcgacggg
     1861 gcggaccttg tcggcggcga agcggtggaa cgtgtcgcgg acgagctcga actcctcggc
     1921 gaggtgggcg ggcccgccgc cgtggcgggc gacctcctcg gcgacgtcct cggcgaactc
     1981 cggggcccgg tgggcggcga cgaactcgcc ggccggcgac agctcggcgg cgctcacacc
     2041 ccattcggcc tcccggccca ccagccgggc gacgaggtcg gcgatggctt cggccgcgaa
     2101 caggcaggcg aggcgggcct ggaggccgcc gtgggcgccg tactcgcaca tcaccgccgc
     2161 cccctcgaca ccggcggtgg cgtgggccag gtcgtaggcc agcacctggt gacggtcgag
     2221 cttcgccacc gagatgcgcc cgtcctcggc cgacagcccg gccaggtggg cggccgcctt
     2281 ccggcagacg ccccgggcga cggcgacggc ttgggcggcg gcgtccagat ccggcgtgtt
     2341 cacggctctc cgatcctcgg gcggtccggt gat
//
LOCUS       DATGJT010000664         3295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1336001, whole genome shotgun sequence.
ACCESSION   DATGJT010000664 DATGJT010000000
VERSION     DATGJT010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3295
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1336001"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VKX24_11440"
     CDS             <1..641
                     /locus_tag="VKX24_11440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013676089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09144.1"
                     /translation="GVEVRPLRQMTGDAEFNEVYLNDVRLPDDLRLGGEGDGWRVSMT
                     TLMNERVSIGGGRARRGSGAIAVAVDVWKRTGRTDPAYRDRLMKLWVAAEVNRLTNIR
                     AGQMRKAGTPGPEGSVAKLNFAELNQAISELCVDLMGPEGQLYTDYDSPRRESVGFFT
                     GDPRYFFLRSRANSIEGGTSEVLRNILGERVLGLPGEPRTDKDLPWRDVPRS"
     gene            664..1782
                     /locus_tag="VKX24_11445"
     CDS             664..1782
                     /locus_tag="VKX24_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018354326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09145.1"
                     /translation="MNLTFTEEQRALRAEVAAFLDEERAAGSFTPAVDAWITGFDRAF
                     TKKMAARGWIGLTWPEKYGGGGRTYVDRLCLTELLLAAGAPLAAHWFADRQMGPSILA
                     HGTEAQKERYLPEILAGDVTYCIGMSEPQAGSDLAGVRTRGVRDGSGWRISGHKIWTS
                     LAHLSDYIYVLARTDPASERHDGLSEFIVPLRSAGVTITPIHDMSGAHHFNEVFLGEV
                     AVDGDALVGTEGGGWRQITGQLGYERAGLERVMSTWALFEAMRTAAGDDERRREELGA
                     LEAAARVARLLVFRAAAVADAGRPPDHEAAMAKVFATDVEQRMVEVASQWAGRESRTA
                     DAFGGHLLPAWLIAPSFSIRGGTNEVLRGIIARRALGL"
     gene            1800..2702
                     /locus_tag="VKX24_11450"
     CDS             1800..2702
                     /locus_tag="VKX24_11450"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09146.1"
                     /translation="MDFTVTDDERAVIDAAAQVAGSADPWAALADGGWLDILLEDGRG
                     PAYLGLVAEALGGAGVAVPLVGTAAVWPTLFGGSAGGRRVGVADALPAGDDADNGLLC
                     EDGVGADVVVVLRDGRAGVHETFSVEPVGGLDGDGLARLRLEGPALDRCKDPELVAEA
                     RRRAAALTAAEMAGGIDRIASMTAGYVTERQQFGRSVSAFQVVAHGAARLATLAQAAT
                     WSARLACMSPDPSDTAAAKGWISQAAAEASALAHQLHGAIGFTEEYGLQRLSKRLRTL
                     RFAWGDDRFHHRALGGRSLGARPA"
     gene            2702..>3295
                     /locus_tag="VKX24_11455"
     CDS             2702..>3295
                     /locus_tag="VKX24_11455"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HLJ09147.1"
                     /translation="MEYAALLARRRSTRRFDTGRDVPDDVLERILAAPLAMPHAGNTY
                     DWRGVVLRRRDRDPQAWSAVFSALLEQSYVEEAAVVIVWAVQPGWWAERYRANVGELV
                     ERGLVDPARQKGLLAMVERGPAGAGGGAPGDGGGAPGDGGLATLLIGEAMMGVAAAML
                     AALDAGLGATVTACRPAELAAALGLPDGAVLCPAGVLA"
BASE COUNT          401 a         1197 c         1274 g          423 t
ORIGIN      
        1 ccggcgtcga ggtgcgcccg ctgcggcaga tgaccggcga cgccgagttc aacgaggtgt
       61 acctcaacga cgtccgtctc cccgacgacc tccgcctcgg cggcgagggc gacggctggc
      121 gcgtctcgat gaccacgctg atgaacgagc gggtgtcgat cggcggcggg cgggccaggc
      181 gggggagcgg cgccatcgcc gtggccgtcg acgtctggaa gcggacgggc cgaacggatc
      241 ccgcctaccg cgaccggctg atgaagctgt gggtggcggc cgaggtcaac cggctgacga
      301 acatccgggc cgggcagatg cgcaaggccg gcacgcccgg ccccgagggc tccgtggcca
      361 agctgaactt cgccgagctg aaccaggcga tctccgagct ctgcgtcgat ctcatgggcc
      421 cggagggcca gctctacacc gactacgaca gccctcggag ggaatcggtg ggcttcttca
      481 ccggcgaccc ccgctacttc ttcctccggt cccgggccaa ctccatcgag ggcggcacgt
      541 cggaggtgct gcgcaacatc ctcggcgaac gggtcctcgg cctgccgggc gaaccccgta
      601 ccgacaagga cctgccctgg cgggacgtgc cgcgctcttg accggccggc gggagccaag
      661 ccgatgaacc tgacgttcac cgaggagcag cgggccctcc gggccgaggt cgccgccttc
      721 ctcgacgagg agcgggcggc cggctccttc acgcccgcgg tcgacgcctg gatcaccggc
      781 ttcgaccggg ccttcacgaa gaagatggcg gcccggggct ggatcgggct cacctggccg
      841 gagaagtacg gcggcggcgg tcggacctac gtcgaccggc tctgcctgac cgagctgctg
      901 ctggcggcgg gcgcgccgtt ggccgcccat tggttcgccg accgccagat gggcccgtcg
      961 atcctggccc acggcaccga ggctcagaag gagcgctacc tgccggagat cctggccggc
     1021 gacgtgacgt actgcatcgg gatgtcggag ccgcaggcgg gcagcgacct ggccggcgtc
     1081 cgcacccggg gcgtgcggga cgggtcgggc tggcgcatca gcggccacaa gatctggacg
     1141 agcctggccc acctctccga ctacatctac gtcctggccc ggacggatcc cgcctcggaa
     1201 cgtcacgacg gcctgtcgga gttcatcgtg ccgctgcgct ccgccggggt gacgatcacc
     1261 ccgatccacg acatgtcggg cgcccaccac ttcaacgagg tcttcctcgg cgaggtggcc
     1321 gtcgacggcg acgccctcgt cggcaccgag ggcggcggct ggcggcagat caccgggcag
     1381 ctcggctacg agcgggccgg cctggagcgg gtcatgagca cctgggccct gttcgaggcg
     1441 atgcggacgg cggccggcga cgacgagcgc cgccgggagg agctcggcgc gctggaggcc
     1501 gcggcccggg tggcccgcct gctggtgttc cgggcggcgg cggtggccga cgccggccgc
     1561 ccacccgacc acgaggcggc gatggccaag gtgttcgcca ccgacgtcga gcagcgcatg
     1621 gtggaagtgg cgtcgcagtg ggccgggcgg gaatcccgca cggccgacgc cttcggcggc
     1681 cacctcctcc cggcgtggct gatcgccccg agcttctcga tccggggcgg gacgaacgag
     1741 gttctgcggg gcatcatcgc ccggcgggcc ctcggcctgt agaagggacc ggcgggcgca
     1801 tggatttcac cgtgaccgac gacgagcggg ccgtcatcga cgccgccgcc caagtggcgg
     1861 gctccgccga tccgtgggcg gcgctggccg acggcggctg gctcgacatc ctgctggagg
     1921 acggccgggg cccggcttac ctcgggctgg tggccgaggc cctgggcgga gcgggcgtgg
     1981 ccgtgccgct ggtgggaacg gcggccgtct ggccgacgct gtttggcgga tcggccggcg
     2041 gccgccgggt cggcgtcgcc gacgccctgc ccgccggaga cgacgccgac aacgggctgc
     2101 tgtgcgagga cggcgtcggg gccgacgtcg tcgtcgtcct gcgggacggg cgggccggtg
     2161 tccacgagac gttctcggtc gagccggtcg gcgggctcga cggcgacggg ctggcccggc
     2221 tccggttgga ggggccggcg ctcgaccgct gcaaggaccc cgagctggtg gccgaggccc
     2281 gccgccgggc ggcggcgctg acggcggcgg agatggccgg cggcatcgac cgcatcgcct
     2341 cgatgaccgc cggctacgtc acggagcgcc agcagttcgg ccggtccgtc tccgccttcc
     2401 aggtggtggc ccatggcgcc gcccggctgg ccaccctggc ccaggccgcc acgtggtcgg
     2461 cccgcctggc ctgcatgtcg cccgacccgt ccgacaccgc ggcggccaag ggctggatct
     2521 cgcaggccgc ggccgaggcc tcggccctgg cccaccagct ccacggagcc atcgggttca
     2581 ccgaggagta cgggctccag cggctgtcga agcggctgcg gacgctgcgc ttcgcctggg
     2641 gcgacgaccg gttccaccac cgggctctcg gtgggcgctc cctcggcgcc cggccggcct
     2701 gatggagtac gccgccctgc tggcccgtcg gcggagcacg cgccggttcg acaccggccg
     2761 cgacgtcccc gacgacgtgc tggagcggat cctggccgcg ccgctggcca tgccccacgc
     2821 cggcaacacc tacgactggc ggggcgtcgt cctccggcgc cgggaccgcg acccgcaggc
     2881 ctggtcggcg gtgttctccg ccctgctgga gcagagctac gtggaggagg ccgccgtcgt
     2941 gatcgtctgg gccgtgcagc ccggctggtg ggccgagcgg taccgggcca acgtcggcga
     3001 gctggtcgag cgggggctgg tggaccccgc ccgccagaag ggcctgctgg ccatggtgga
     3061 gcgcggcccc gccggcgccg gcggtggtgc gcccggcgac ggcggcggtg cgcccggcga
     3121 cggcgggctc gccacgctgc tcatcggtga ggcgatgatg ggcgtggcgg cggcaatgct
     3181 cgccgccctc gacgccgggc tcggcgccac ggtgaccgcc tgccgtccgg ccgagctggc
     3241 ggcggcgctc ggcctgcccg acggcgccgt cctctgcccg gccggggtcc tcgcc
//
LOCUS       DATGJT010000665         2757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1539270, whole genome shotgun sequence.
ACCESSION   DATGJT010000665 DATGJT010000000
VERSION     DATGJT010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539270"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            565..1557
                     /locus_tag="VKX24_11460"
     CDS             565..1557
                     /locus_tag="VKX24_11460"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HLJ09148.1"
                     /translation="MRIRGIALTVCAFLTVGLMATSASASNDADFAKQWSLAKIGAPA
                     AWAHTTGQGVRVGIVDTGVDLNHEDLAGKVVEGTNCIGAAGDPAKCKGSPQDDQGHGT
                     HVAGIIAANKDNGIGIAGVAPDAQLVVAKALSAKGEGSEDDINAGIKWVVDHGAKVVN
                     LSLGDPNFVFTSLLGTGMRTGIEYAWSHGAVPVVAAGNSDLFGLGIGSSNYGNLDALV
                     VGATGPDDKVASYSSPIGSAKWGILAPGGAGDGNKDHDIWSTFWQQGKTNSYAALAGT
                     SMATPHVVGAVALLLAEGLTPQQAIDRLIKTADTKVACDHCSGRLDLAKATAPQ"
     gene            complement(1693..>2757)
                     /gene="dusB"
                     /locus_tag="VKX24_11465"
     CDS             complement(1693..>2757)
                     /gene="dusB"
                     /locus_tag="VKX24_11465"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016697503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HLJ09149.1"
                     /translation="GVTTRAFRRLCRRFGPGGLYVNEMLTARALVEGNERTARMLRFD
                     ADERPRSAQLYGVAPGTVAEATRRLIGDFGVEHVDLNFGCPVPKVTAKGGGAALPVRR
                     RLLADVIGAAVRAAAPDGVPVTVKFRRGIDATLLTGVTTGRIAEAEGAAAVALHARTA
                     EQRYAGDADWSAIAELKAAVTTIPVLGNGDIWEAGDAVRMMADTGCDGVVVGRGCLGR
                     PWLFGDLGAVFAGRAAEPPPPFGAVADVMRRHAELLAEDEGEPLALCAFRRHAAWYTQ
                     GYALGADARRALGTVASLAGLDAVLAGIDPGLTPPPEAARWKRGHTDGPRPVRLPDGW
                     LRLADDPTPPAGAEVLVSGG"
BASE COUNT          402 a          991 c          987 g          377 t
ORIGIN      
        1 gtgggcgcca tgcccctcgt ccgacccggc ggcgggcggg ttgccgggct gctgctgccg
       61 gggcgcggcg tacgtcgccg ccggggcgcc gagaatcatc agcgctccga cgagcggcgc
      121 aaccagtgca ccggggatgg cacggcgcgg ccgactcggg cccttggtca tctgttccca
      181 cctctcgtcg atggctgtct cccaggaact gtcaggcgtt gcttaccctg aagctgatca
      241 atatgcacct tttttcccag tttctggtgt cacccggtgg cagaaatccc gcccaaaagg
      301 tcgctatcgg cccgaagggt gcgtagagtt agctcgtgcg caattggggc cgactgtcga
      361 tgcaatcggt ttcgccgcgc tcccgctgcc cgggcggccg ttgccgccgc tccggtacgg
      421 gtccccgcca gatctgactc cgtagcttct cggcactctt cacagcgctg tacctgggga
      481 ccagttggcc gttctgcacc gtcgcccgcg ccggtcagaa ccgacacgaa gagacagggt
      541 cgagacaact aaaggagcag gtccatgcga attcgcggaa tcgcgctgac cgtttgcgcc
      601 ttcctcaccg tcgggctcat ggcgacgtcg gccagcgcgt cgaacgacgc cgacttcgcc
      661 aagcagtgga gcctggccaa gatcggggcc ccggcagcct gggcccacac gacgggccag
      721 ggtgtgcgcg tcgggatcgt cgacaccggc gtcgacctga accacgaaga tctcgccggc
      781 aaggtggtgg agggtacgaa ctgcatcggc gccgccggtg atcccgccaa gtgcaagggt
      841 tcaccgcagg acgaccaggg tcacggcacg cacgtggccg ggatcatcgc cgccaacaag
      901 gacaacggca tcggcatcgc cggcgtggcg cccgacgccc agctggtcgt ggccaaggcg
      961 ctgagcgcca agggcgaggg ctcggaagac gacatcaacg ccgggatcaa gtgggtggtg
     1021 gaccacggcg ccaaggtcgt gaacctgagc ctcggtgacc cgaacttcgt cttcaccagc
     1081 ctgctcggca ccgggatgcg taccggcatc gagtacgcct ggtcgcacgg cgccgtgccg
     1141 gtcgtggcgg cgggcaactc cgatctcttc ggtctcggga tcggcagctc gaactacggc
     1201 aacctcgacg ccctcgtggt cggcgccact ggccccgacg acaaggtggc gtcctactcc
     1261 agcccgatcg gcagcgccaa gtggggcatc ctggcccccg gcggcgccgg cgacggcaac
     1321 aaggaccacg acatctggtc gacgttctgg cagcagggca agaccaactc ctacgccgcc
     1381 ctggccggca cgtcgatggc cacgccccac gtggtcggcg ccgtagcgct gctgctggcc
     1441 gagggcctca cgccccagca ggcgatcgac cggctgatca agacggccga caccaaggtc
     1501 gcctgcgacc actgcagcgg tcgcctcgac ctggccaagg ccaccgcccc gcagtagtac
     1561 ccggatccgg ctgcggcgtt gcagcgttgc agcgatggag cgctgcgaca ccgtggctca
     1621 ccagacgtcg ggccgcaccg ggacgacctc cccctcccgg tgcggctcga ccgcgtccat
     1681 ccctccggcg cgctaccccc cgctgacgag gacttcggcg ccggccggcg gcgtggggtc
     1741 gtcggccagt cggagccagc catcgggcag gcggacgggc cgggggccgt cggtgtggcc
     1801 ccgcttccaa cgcgccgcct cggggggcgg cgtcagccct gggtcgatgc cggccagcac
     1861 ggcatcgagt cccgccagcg acgcaacggt gccgagagcg cggcgggcgt cggcgcccag
     1921 ggcgtagccc tgcgtgtacc aggcggcgtg gcggcgaaag gcgcacaggg ccaaaggctc
     1981 tccctcgtcc tcggcgagca gctcggcatg ccgtcgcatg acgtcggcca cggcgccgaa
     2041 cggcggtggc ggctcggcgg cccggccggc gaagacggcc ccgagatcgc cgaagagcca
     2101 cggccggccg aggcagcccc gtccgacgac gacgccgtcg cacccggtgt cggccatcat
     2161 gcggacggcg tcgccggcct cccagatgtc gccgttgccg agcaccggga tcgtcgtcac
     2221 cgccgccttg agctcggcga tggcgctcca gtcggcgtcg ccggcgtagc gctgctcggc
     2281 ggtgcgggcg tggagggcga cggcggcggc gccttccgct tcggcgatgc ggccggtggt
     2341 cacgccggtg agcagagtgg cgtcgatgcc ccggcggaac ttgacggtga ccgggacgcc
     2401 gtccggtgcg gcggcccgga cggcggcgcc gatcacgtcg gccagcagcc ggcgacggac
     2461 gggtagcgcc gctcccccgc ccttggccgt gaccttgggg accgggcagc cgaagttgag
     2521 gtcgacgtgc tccacgccga agtcgccgat cagccggcgg gtggcctcgg ccaccgtgcc
     2581 gggggctacg ccgtagagct gggcgctgcg gggccgctcg tcggcgtcga accggagcat
     2641 gcgggccgta cgctcgttgc cctccaccag cgcccgggcg gtcagcatct cgttgacgta
     2701 gaggccgccg ggcccgaacc gccggcacag ccgccggaag gcccgggtcg tgacccc
//
LOCUS       DATGJT010000666         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1022807, whole genome shotgun sequence.
ACCESSION   DATGJT010000666 DATGJT010000000
VERSION     DATGJT010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1022807"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..943
                     /locus_tag="VKX24_11470"
     CDS             <1..943
                     /locus_tag="VKX24_11470"
                     /inference="COORDINATES: protein motif:HMM:TIGR03624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HLJ09150.1"
                     /translation="FTGLVSPGEPAHALVLDRQHWVGANLRSFRNTLEPFTRRVGERM
                     AQSPFAPAGRAVAGAEMGVLMGFLSQRVLGQYDLLVPDALPSGDTPEPPGGGDADAVY
                     YVGPNILVLEKRYGFRPGDFRLWIALHEVTHRAQFRAVPWMKGYFLSLVDASLGMIEP
                     DPKRLVRALERAAEAARRGRNPLDDGGIVSLFATDEQRVVIDQVQALMSLLEGHGNVV
                     MDRLGKRHVTGQERMSAALKARRQSGGVGGVFRKLIGIEMKMRQYEIGEQFITRLEET
                     VGIEALDAAWRGPDCLPTLAELEAPERWLERVGTLTG"
     gene            948..2162
                     /gene="tilS"
                     /locus_tag="VKX24_11475"
     CDS             948..2162
                     /gene="tilS"
                     /locus_tag="VKX24_11475"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HLJ09151.1"
                     /translation="MTADFAGLEPPVVVACSGGPDSLALLALAADAGLAPVAVHVDHG
                     ARPGSAAEAGVVARFAEHLGTGFAGERVAVAPGPNFEARAREARYEALERARVRLGAT
                     AVLVGHTRDDQAETVLLNVLRGAGLSGLAGMPARRGTVARPLLGAPRADLAAICARLG
                     LAPIEDPMNADPVHRRVWLRREVIPALESGARRDLRAVLARQAAVAREDSDFFDGLAA
                     ELLAAALEDDRLRTKTLMAAPLALARRAVRLWLGPPPPSSTDVERILAVARGEHRAVE
                     VAGGIEVRRSRGLVSRLDIHCGGVAANVQTFPVELPGAVVGLGLDFVAWVERAGPVRW
                     PDGRWTAVADADLAGEHAVLSRDGRGRVLLAAPDGSPLWVLGYRVDDRVRVSPGTRRF
                     LWLTVEAGGPRG"
BASE COUNT          247 a          814 c          820 g          301 t
ORIGIN      
        1 gttcaccggc ctggtgtcgc cgggggagcc cgcccacgcc ctggtcctcg accgccagca
       61 ctgggtcggg gccaacctcc gcagcttccg caacaccctc gaaccgttca cccgccgggt
      121 cggcgagcgg atggcccaga gccccttcgc ccccgccggc cgggcggtgg ccggcgccga
      181 gatgggcgtc ctcatgggct tcctgtccca gcgggtcctc gggcagtacg acctgctcgt
      241 ccccgatgct ttgccttcgg gggacacccc cgaacccccg gggggcggcg acgccgacgc
      301 cgtctactac gtcgggccca acatcctggt cctggagaag cgttacggct tccggcccgg
      361 cgacttccgg ctctggatcg ccctccacga ggtcacccac cgggcccagt tccgggccgt
      421 cccctggatg aagggctact tcctgtcgct ggtcgacgcc tcgctgggga tgatcgagcc
      481 cgaccccaag cgcctcgtcc gggcgctcga acgggcggcc gaggcggcgc ggcggggccg
      541 gaaccccctc gacgacggcg gcatcgtctc cctcttcgcc accgacgagc agcgggtggt
      601 catcgaccag gtccaggccc tcatgtcgct cctggaaggg catggcaacg tggtcatgga
      661 ccgcctcggg aagcgccacg tcaccggcca ggagcggatg tcggcggcgc tcaaggcccg
      721 ccggcaatcg ggtggcgtcg gcggcgtgtt ccgcaagctg atcggcatcg agatgaagat
      781 gcgccagtac gagatcggcg agcagttcat cacccgcctc gaggagacgg tggggatcga
      841 ggcgctcgac gccgcctggc gggggcccga ctgcctcccc accctggccg agctggaggc
      901 gccggagcgg tggctggagc gggtcggcac gctgaccggc tgacaacgtg acagccgatt
      961 tcgccgggct ggagccgccg gtcgtcgtgg cctgctcggg aggccccgac tcgctggcgc
     1021 tgctggcgct ggcggccgac gccgggctgg cccccgtcgc cgtccacgtc gaccacggag
     1081 cccggccggg cagcgccgcc gaggccggcg tcgtcgcccg gttcgccgag cacctgggga
     1141 cgggcttcgc cggcgaacgg gtggccgtgg cccccgggcc gaacttcgag gcccgggccc
     1201 gggaggcccg gtacgaggcg ctggagcggg cccgggtgcg gctcggggcc accgccgtgc
     1261 tcgtcggcca cacccgcgac gaccaggccg agacggtcct gctcaacgtc ctccgcggcg
     1321 ccgggttgtc cggtctcgcc ggcatgccgg cccgccgcgg gacggtggcg cggccgctgc
     1381 tcggcgcgcc ccgggccgac ctcgccgcca tctgcgcccg cctcgggctg gccccgatcg
     1441 aggacccgat gaacgccgac cccgtccacc gccgggtgtg gctgcggcgg gaggtgatcc
     1501 cggccctgga gtccggcgct cggcgggacc tccgggccgt tctggcccgc caggccgccg
     1561 tggcccggga ggattcggac tttttcgacg gcctcgccgc cgagctcctc gccgccgctc
     1621 tggaggacga ccggctccgg accaaaacgc tgatggcggc gcccctcgcc ctcgcccgcc
     1681 gggccgtccg cctttggctc gggccgccgc cgccgtcgtc gaccgacgtg gagcggatcc
     1741 tggccgtcgc ccggggtgag caccgggcgg tggaggtggc cggcggcatc gaggtccgcc
     1801 ggagccgagg tctcgtcagt cgtttggaca ttcactgcgg aggggtcgca gcaaacgtcc
     1861 aaacgttccc ggtggagctg ccgggggcgg tcgtcgggct cggcctggac ttcgtggcct
     1921 gggtcgagcg ggcgggcccc gtccgctggc cggacggccg gtggacggcg gtggcggacg
     1981 ctgacctcgc cggggaacac gccgtcctga gccgcgacgg ccggggccgc gtcctgctgg
     2041 ccgccccgga tgggagtcca ctctgggtgc tcgggtaccg tgtggacgac cgcgtccggg
     2101 tctcccctgg cacccgacgc ttcctctggt tgacggtcga ggcgggaggc cctcgggggt
     2161 gaacgatctc gggaaggtca tc
//
LOCUS       DATGJT010000667         2165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_501019, whole genome shotgun sequence.
ACCESSION   DATGJT010000667 DATGJT010000000
VERSION     DATGJT010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501019"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..1944
                     /locus_tag="VKX24_11480"
     CDS             58..1944
                     /locus_tag="VKX24_11480"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HLJ09152.1"
                     /translation="MSSGAIRRRPLRWSGKGGPDRPSESARSLGLALRARSEEVGEVV
                     LARWEAGRSDPSPITDRIREDVRRFCRSGTGQITQYLIHGEIASPEQTTNQAAPGRAA
                     ANQSVTLADLVKMHLYWRDVVVEVLNEEAERLCSDPDAIDLAVTASRMGSDSALVRVA
                     KVFDGQRGVLQSQLEEEQGRLTHQALHDALTGLPNRVLFLERLAQSVEAATRRSIHSS
                     VLFVDIDRFKSVNDIAGHAAGDQLLIGVARRLREVLRPADTVARLGGDEFVVLCENLY
                     DVQKEAVAIAERICDTLSLPFSFAGNELFTSASVGIAFVRPGDDPHVLVARADSAMYM
                     AKQRGRSRYEIYHPDFDQRTTRRAELINGLHRAVERQELVLHYQPVKDLASGQVVAME
                     ALVRWQHPSLGIVAPTEFIPLAEETGLISEIGRWVMTEACTQCAAWRAEGYAKVDVAV
                     NVSGRQLEDPGFVAEVQAILEATTLPPSALSMEVTESVIVTEGSIGHGVMEDLQRIGV
                     RLAIDDFGIGYSSLSYLTKLPVHALKVDRTFIAGLGTAQDASIIGAMVDLAHKLGLEV
                     VAEGVETETELEQLKAANCDEAQGFLLGRPAPLEVLQERGAMRRAELIDPASGGSGHS
                     IPTR"
     gene            complement(1960..>2165)
                     /locus_tag="VKX24_11485"
     CDS             complement(1960..>2165)
                     /locus_tag="VKX24_11485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09153.1"
                     /translation="LVRCRHGHLYTTSWVPGVKLKGLDFGIARFQYCPIGRHWSLAVP
                     VRPTSVTAAERAAAEAHHDVAIP"
BASE COUNT          316 a          785 c          768 g          296 t
ORIGIN      
        1 cgtggcgaca ggcagcgacc ccaaggcggc ccggctcccc gcgagcggag ccgcaccgtg
       61 agcagcgggg cgatcagacg ccggccgctg cgctggtcgg ggaagggcgg gcccgaccgc
      121 ccgagcgagt ccgcccgctc cctcggtctc gccctgcggg cgcggagcga ggaggtgggc
      181 gaagtggtcc tcgcccgctg ggaggcggga cgctccgacc cctcaccgat caccgaccgg
      241 atccgggagg acgtgcgccg gttctgtcgc agcgggaccg gccagatcac ccagtacctg
      301 atccacggcg agatcgcgtc ccccgagcag accacgaacc aggccgcccc gggaagggcc
      361 gcggccaacc agtcggtgac gctcgccgat ctggtgaaga tgcacctcta ctggcgtgat
      421 gtggtcgtcg aggtgctgaa cgaggaggcc gagaggttgt gcagcgaccc cgacgccatc
      481 gacctcgccg tgacggcgag ccggatggga tcggactcgg cgctcgtgcg ggtggcgaag
      541 gtgttcgacg gccagcgcgg tgtcctccag tcccagctcg aggaggagca gggccggctc
      601 acccaccagg ccctccacga cgccctgacc gggctgccca accgggtgct gttcctggag
      661 cgcctggccc agtcggtcga ggcggccacc cgccgctcca tccactcctc ggtcctcttc
      721 gtcgacatcg accggttcaa gtcggtgaac gacatcgccg gccacgccgc cggcgaccag
      781 ctgctcatcg gggtggcccg gaggctgcgc gaggtgctgc gcccggccga caccgtggcc
      841 cgcctgggcg gggacgagtt cgtcgtcctg tgcgagaacc tctacgacgt ccagaaggag
      901 gccgtcgcca tcgccgagcg catctgcgac accttgtctt tgcccttcag cttcgcgggc
      961 aacgagctgt tcacctcggc ctcggtcggc atcgccttcg tccggcccgg cgacgacccc
     1021 cacgtgctcg tggcccgggc cgactcggcc atgtacatgg ccaagcaacg gggccggagc
     1081 cgttacgaga tctaccaccc cgacttcgac cagcggacca cgcggcgggc cgagctcatc
     1141 aacgggctgc accgggcggt cgagcgccag gagctggtgc tgcactacca gccggtgaag
     1201 gacctggcct cgggccaggt ggtggccatg gaggccctcg tccgctggca gcacccgagc
     1261 ctcggcatcg tcgcccccac cgagttcatc ccgctcgccg aggagaccgg gctcatctca
     1321 gagatcgggc gctgggtcat gaccgaggcc tgcacccagt gtgcggcctg gcgggccgag
     1381 ggctacgcca aggtggacgt ggccgtgaac gtctcgggcc gccagctgga ggaccccggc
     1441 ttcgtggccg aggtccaggc gatcctcgag gccaccacgc ttcccccctc ggccctctcg
     1501 atggaggtga ccgagtcggt catcgtgacc gagggctcca tcggccacgg ggtgatggag
     1561 gacctccagc gcatcggggt ccgcctggcc atcgacgact tcgggatcgg ctactcctcg
     1621 ctctcctatc tgaccaagct cccggtgcac gcgctcaagg tcgaccgcac cttcatcgcc
     1681 gggctgggca ccgcccagga cgcctccatc atcggggcca tggtcgacct cgcccacaag
     1741 ctcggcctgg aggtggtggc cgagggggtc gagaccgaga ccgagctcga gcagctgaag
     1801 gcggccaact gcgacgaggc ccagggcttc ctcctcggcc ggccggcgcc gctcgaggtg
     1861 ctgcaggagc ggggggcgat gcggcgcgcc gaactcatcg acccggccag cggcggctcg
     1921 ggccacagca tcccgacccg ctagcacggc ggcccgccgt taggggatgg ccacgtcgtg
     1981 gtgcgcctcg gctgcggcgc gctcggcggc ggtcacgctc gtcggccgca ccgggacggc
     2041 gaggctccag tggcgcccga tcgggcagta ctggaaccgg gcgatgccga aatcgagccc
     2101 cttcagcttc acgcccggga cccagctggt cgtgtacagg tggccgtgcc ggcaccggac
     2161 gagtg
//
LOCUS       DATGJT010000668         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_921011, whole genome shotgun sequence.
ACCESSION   DATGJT010000668 DATGJT010000000
VERSION     DATGJT010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921011"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..1667
                     /locus_tag="VKX24_11490"
     CDS             192..1667
                     /locus_tag="VKX24_11490"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HLJ09154.1"
                     /translation="MANAGGNIVLIMSDQHRADMMGCAGDETVATPTLDRLAAEGVRF
                     SRVSCQGPLCMPARASFMTERYVRDHGVYTNWAEIAEDAPTYVWALREAGYHTALLGK
                     AHLYRDEVLQAAHINQLAPKLQALGFAEVHETGDKFLPQIPTAYSDYLRSRDLLGVYK
                     DHLAARSYQGENESGQNATKTVPMWDATPMPIPLDAYVDAWHGRLAADWIRDYHRTEP
                     FFLFVGFPGPHDPWDAPAEAVAAYRDVDISMPRSTARPEVRDTGRYKDLLNSFLWVSD
                     SDTMSDDAIRGMRRAYAADITVIDAAVARILAALEAKDLLASTWVIYTSDHGEMAGWH
                     GLMSKCVLYEGAVRVPLIVRPPEGRPPLLVERRVEHVDVPATVRAIAGGPPIAMSAGQ
                     SLLGDVGGEPAGAKPYSVSENWGFAAFETDRYKLVVDEDDVAPCQLFDLVEDPDEDRN
                     LVAVPEAGGIIDELMDDVVRPFLSTPPARPHPSLFTGGTWE"
     gene            1719..1991
                     /locus_tag="VKX24_11495"
     CDS             1719..1991
                     /locus_tag="VKX24_11495"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLJ09155.1"
                     /translation="MSEHEFRAEMATAGHPVSTWANGAHDRYGAHTHPYRKILCCLDG
                     SIVFHTAAGENPLRAGDRLIIEAGVPHSAIVGPAGVRCAEAHVIDT"
BASE COUNT          354 a          741 c          653 g          311 t
ORIGIN      
        1 gagcccgccg ctgtgaccac tggcgaaagc atcgcgccgg caataccgac gtgcaccgcc
       61 gcgtcttctc caccctggta tccggcacgg cgcgccaccg tcgatgggta ccggtcgccg
      121 taggcggcgg cgcgtccgag ctgcgaaact gccgccgtcg gtaccaggaa caacagcccc
      181 cgagggaagc gatggccaac gcaggcggga acatcgtcct gatcatgtcc gaccagcacc
      241 gggccgacat gatgggctgc gccggagacg agaccgtggc aacgcccacg ctcgaccggc
      301 tggccgccga aggcgtgcgc ttcagccggg tctcgtgcca ggggcccctg tgcatgccgg
      361 cccgagcctc gttcatgacc gagcggtacg tgcgcgatca cggcgtctac acgaactggg
      421 ccgagatcgc cgaggacgca cccacctacg tctgggcgct cagagaagcc ggctaccaca
      481 ccgccctgct cggcaaggca cacctctacc gtgacgaggt cctgcaagcc gcccacatca
      541 accagctggc tcccaagctg caggccctcg gcttcgccga ggtccacgag accggcgaca
      601 agttcctgcc ccagatcccc acggcctaca gcgactacct ccggagtcgg gatctcctcg
      661 gcgtctacaa ggaccacctg gcggcccgca gctaccaggg cgagaacgag agcggccaga
      721 acgccaccaa gaccgtgccc atgtgggatg ccactccgat gccgataccc ctcgacgcct
      781 acgtcgatgc ctggcatggg cggttggccg ccgactggat cagggattac caccgcactg
      841 agcccttctt cttgttcgtc ggcttcccgg gaccccacga tccctgggat gctcccgccg
      901 aagccgtggc cgcctaccgc gacgtggaca tctccatgcc ccgctcgacg gcgcgcccag
      961 aagtcaggga caccggtcga tataaggacc ttctcaattc ctttctgtgg gtgtccgact
     1021 ccgacaccat gtcggacgat gccatcaggg gcatgcgacg ggcttacgcc gccgacatca
     1081 ccgtcatcga tgccgcggtg gcccgcatcc tggccgccct cgaagcgaag gacctactgg
     1141 cctcaacatg ggtcatctac acgagcgacc acggcgagat ggccggatgg cacgggttga
     1201 tgtcgaagtg cgtcctctac gagggagccg tacgtgtgcc cctcatcgtc cggccacctg
     1261 agggacggcc gccgttgctg gtcgagcgcc gggtggagca cgtcgacgtc ccggccaccg
     1321 tgcgggccat tgccgggggg cctccaatcg ccatgagcgc cggacagtcc ctcctcggcg
     1381 acgtcggcgg cgaacccgcg ggcgccaagc cctactcggt cagcgagaac tgggggttcg
     1441 ccgccttcga gaccgatcgg tacaagctgg tggtcgacga ggacgacgtg gctccctgcc
     1501 agctgttcga cctggtggag gaccccgacg aggaccgcaa cctcgtcgct gtccctgagg
     1561 cgggcggcat catcgacgag ttgatggatg acgtcgtgcg gccgttcctg tccacgcccc
     1621 cggctcggcc tcaccccagt ctgttcaccg ggggcacctg ggagtgagta atgccacgac
     1681 ccggcggttc gccatccggc ccggttgaca tggccgcggt gagcgaacac gaattcagag
     1741 ccgagatggc gacggccggc catccggtct cgacctgggc gaatggcgct cacgaccgtt
     1801 acggcgccca tacccatccg taccggaaga tcctctgctg cctcgacggc tcgatcgtct
     1861 tccacaccgc cgccggcgag aatcccctgc gggccggcga tcggctgatc atcgaggccg
     1921 gcgtcccaca ttccgccatc gtcggcccag ccggggtccg ctgcgccgag gctcacgtga
     1981 tcgacacatg agggacccga ccacgcgggc cacgctcttc gttcaggcca ggatcacgag
     2041 aaggtgaagc actgggtga
//
LOCUS       DATGJT010000669         3922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_195760, whole genome shotgun sequence.
ACCESSION   DATGJT010000669 DATGJT010000000
VERSION     DATGJT010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195760"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VKX24_11500"
     CDS             complement(<1..252)
                     /locus_tag="VKX24_11500"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ09156.1"
                     /translation="MSPAARYDGVADWYDEAFSTYGSEEGTAGRLADRLGPGRGRPLL
                     DVACGTGLHFSLVERRGWRVVGVDLSADQLRLAHQRRASV"
     gene            355..972
                     /locus_tag="VKX24_11505"
     CDS             355..972
                     /locus_tag="VKX24_11505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HLJ09157.1"
                     /translation="MSVRIGLVGDTHIPSAGDDLPAEAYAVLTGCDRILHCGDLHILE
                     VVDRLDRIAPTLVSRGNGDDPKLRPPGVPDDPRIADNVLIDVEGLSIGLTHDLELAES
                     RPADEVPAFLMRRFGRRVDVAVSGHSHVPLIWGLADGTTLVNPGSPTLPYGYRGLVGT
                     LGVLDVDDDRFEVTILDLATDEPQLHLVGPAPYPLTRGPRPVGGH"
     gene            1079..1564
                     /locus_tag="VKX24_11510"
     CDS             1079..1564
                     /locus_tag="VKX24_11510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013427096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HLJ09158.1"
                     /translation="MATLVGPELVASRGRWGPESVSYPVATSDIRRWAIAVYWPQTPP
                     RLFWDEAFARTTRWGGIVAPEDFNPFAWPVPSGPVPPAGAVPGKTPPKGGNVLNGGQV
                     DTFFGRIRPGDVITQRTRLAGWDERMGRLGLMLFLHHESEWRNQSGELLKRRLATSIW
                     Y"
     gene            1578..2045
                     /locus_tag="VKX24_11515"
     CDS             1578..2045
                     /locus_tag="VKX24_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09159.1"
                     /translation="MTERIFFEDIDVGAVGPPFVRKTDFMNWNRYAAVNDEFIYVHMD
                     DEAGRASGQAGAFGMGNLRWSYVFNAIRAWLGDEAEIREVGIQFRAVNNKNDELRTYL
                     RVTDKVLEDGLLRLEVNVFNQDGQGTSPGHAIVALPSKSVAAPTRDPLQSAGS"
     gene            2045..3538
                     /locus_tag="VKX24_11520"
     CDS             2045..3538
                     /locus_tag="VKX24_11520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="HLJ09160.1"
                     /translation="MARNGGVRGGSSRSVQADSRRLPPEVWSVAIVLILGTFMAILDT
                     TIVNVALEPLTRDLHTKLVTIQWVVTGYLLSIAAVIPLCGWLTRRVGPKPVYLVSMVV
                     FTVGSACCGLAHSVGELIGFRVLQGLGGGVIAPVGQMILVKVSGPRNLPRVMSAYGVP
                     TILAPIFGPTVGGLLIVHAGWRAIFFVNVPIGIVAVVMGLRKLPDEARRPGEPIDFFG
                     LALIGAGLVGVTYGLSQVSVPGSASLRVALPISLGVVLMTGFVLRSLRVKFPLLDMRL
                     YANKVFSRASIATFGLGGALTGNSVLMPLYLQGVRGENALNTGLLCAPRGFGALVGTW
                     LSGRMMERLGTGRTAAIGVSLVLLLTCPYIPLGAHTSYLYICVVMVLQGFGIGLSIMP
                     AQTAAYRALRPEQIPDATPQQNIVMRVGSSIGTAILIAVLSHGLAKAGASAPAQASAF
                     GVTYVWLVGISAVALVAAVYLNILERRQPAVVNEEPVDLGELQAEIG"
     gene            complement(3572..>3922)
                     /locus_tag="VKX24_11525"
     CDS             complement(3572..>3922)
                     /locus_tag="VKX24_11525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09161.1"
                     /translation="RAMVEHEPGFRPLVGIPPKPEGMWGIVAGHGLVQADERPTHHSS
                     PMAPSELAAIDWDYVALGHFHGHRVVQEEPVLAVYPGATASSLKGQPGAVVVSLEPGS
                     PASIRWLALELPDR"
BASE COUNT          569 a         1365 c         1346 g          642 t
ORIGIN      
        1 gacggaggca cggcgttggt gggccagacg gagctggtcg gccgacagat cgacgccgac
       61 cacccgccaa cctcggcgtt cgacgaggct gaagtgcagg ccggtgccgc aggcgacgtc
      121 gagcagcggg cgaccgcggc ctgggccgag ccggtcggcc agccgacctg ccgtcccctc
      181 ctcggacccg taggtggaga aggcctcgtc gtaccagtcg gcgacgccgt cgtaacgggc
      241 ggccggactc atcgggatca tcatgccccg gccctctgtc gggaccggac ggaagtcgag
      301 tcgtcgccct gacctcgtga gctcgtgacc gggatcacca ttaccatcac gccggtgtcg
      361 gtccgcatcg ggctcgtcgg tgatacccac atcccgtcgg cgggcgacga tctcccggcc
      421 gaggcgtatg ccgtcctgac gggatgcgac cgcatcctcc attgcggtga cctgcacatc
      481 ctcgaggtcg tggaccgtct cgaccggatc gcccccacgc tcgtgagccg ggggaacggc
      541 gacgatccga agctccgtcc gcccggtgtt cccgacgacc cccggatcgc cgacaacgtg
      601 ctcatcgatg tcgaggggct gagcatcgga ctcacccacg acctcgagct cgcagagagc
      661 cggccggcgg acgaggtgcc ggccttcctc atgcgacggt tcgggcggcg cgtggacgtc
      721 gccgtctccg ggcactccca cgtgccgctc atctgggggc tcgcagacgg cacgacgctc
      781 gtaaaccccg ggagtccaac gctgccctat gggtatcgcg ggctcgtcgg caccctcggc
      841 gtcctcgacg tcgacgacga tcggttcgag gtcacgatcc tcgatctcgc caccgatgaa
      901 ccccagctcc atctcgtcgg tccagcgcca tatcccttga cccgcggccc ccggcccgtc
      961 gggggccact gacggggccg gtcgtggccc ccggcggagc gacagtaaga gttcacaagg
     1021 gctacagtgc cggtgcacat aagggggtgc cgtgcccgac acaaccgagg atgcggcagt
     1081 ggcgaccctc gtcgggccag agctggtcgc ctctcggggc cgctgggggc ccgagtccgt
     1141 ctcctatccg gtcgcgacct cggacatccg ccggtgggcg atcgccgtct actggccgca
     1201 gacgccgccc cggttgttct gggacgaggc gttcgccaga accacccggt ggggcggcat
     1261 cgtggccccc gaggacttca accccttcgc ctggccggtt ccatccggcc ccgttccccc
     1321 cgccggcgcc gtaccgggca aaaccccgcc caagggcggc aacgtgctca acgggggcca
     1381 ggtggacacc ttcttcgggc gcatccggcc cggtgacgtc atcacccagc ggacgcgcct
     1441 cgccgggtgg gacgagcgga tgggccggct cggtctcatg ctcttcctcc accacgagtc
     1501 ggagtggcgc aatcagtcgg gcgagctcct gaagcgtcgg ctggcgacat ccatctggta
     1561 ctgaagaacg gccgagcgtg acggaacgga tcttcttcga agacatcgac gtgggggcag
     1621 tgggcccgcc gttcgttcgg aagaccgact tcatgaactg gaaccggtac gcggccgtca
     1681 acgacgagtt catctacgtc cacatggacg acgaagccgg gagagcttcg ggccaggccg
     1741 gggccttcgg catggggaac ctgcgatggt cctacgtctt caatgcgatc cgagcctggc
     1801 tgggtgacga ggcggagatc agagaggtgg gtatccagtt ccgggccgtt aacaacaaga
     1861 acgacgagct gcgcacgtat ctccgggtca ccgacaaggt cctcgaggac ggcctactcc
     1921 ggctcgaggt gaatgtcttc aaccaggacg gccagggcac atcgcccggg cacgcgatcg
     1981 tcgccctccc ctcgaagtcc gtcgccgccc cgacgcgcga cccgctgcag tcggcgggga
     2041 gctgatggcg aggaacgggg gggtacgggg cggttccagc cggagcgtcc aggccgacag
     2101 ccgcaggctc ccgccggagg tctggagcgt cgccatcgtc ctgatcctcg gcacattcat
     2161 ggcgattctc gacacgacga tcgtcaacgt ggccctcgag ccactcaccc gtgacctcca
     2221 caccaaactc gtcacgatcc agtgggtcgt cacgggctat ctcctgtcga tcgccgcggt
     2281 catcccgctc tgcgggtggc tgacacggcg cgtcggcccg aagcccgtgt acctggtgtc
     2341 gatggtggtg ttcacggtcg gatcggcctg ctgcggcctc gcccactcgg tgggtgagct
     2401 catcggtttc cgggtgctgc aggggttggg cggtggagtg atcgcaccgg tgggccagat
     2461 gatcctggtc aaggtctcag gcccaaggaa cctgccccgg gtgatgagcg cctacggcgt
     2521 gccgaccatc ctcgccccga tcttcggccc gaccgtgggg ggcctcctca tcgtccacgc
     2581 cgggtggcga gcgatcttct tcgtgaacgt cccgatcggg atcgtcgccg tggtcatggg
     2641 gttgcggaag ctccctgacg aagctcggcg ccccggggag cccatcgact tcttcggcct
     2701 cgcgctcatc ggggccggtc tcgtcggggt cacctacggg ctctcgcagg tctcggtccc
     2761 cggctcggcc tcgctgcgcg tggccctgcc catctccctc ggcgtcgtgc tcatgaccgg
     2821 gttcgtcctc cgatcgcttc gcgtcaagtt cccgctgctc gacatgcgcc tctacgcgaa
     2881 caaggtgttc tcgagggcat cgatcgcgac cttcgggctc ggcggtgccc tcaccggcaa
     2941 ctcggtactc atgccgctgt acctgcaagg cgtccggggc gagaacgccc tcaacacggg
     3001 gctcctgtgt gcgccgaggg ggttcggggc gctcgtcggc acctggctgt cgggccggat
     3061 gatggagcgg ctcgggaccg gtcgcactgc cgcgatcggc gtgtcactgg tgctgctgtt
     3121 gacgtgcccc tacatccccc tcggggcgca cacctcgtat ctgtacatct gcgtcgtcat
     3181 ggtccttcag ggattcggca tcgggctgtc gatcatgccg gcgcagacgg ccgcgtatcg
     3241 cgccctgcgc cccgaacaga tccccgacgc gacaccgcaa cagaacatcg tgatgcgggt
     3301 gggctcgtcg atcgggacgg cgatcctgat cgccgtcctc tcccacgggc tggcgaaggc
     3361 cggcgcgtcc gctcccgcgc aggcgagcgc gttcggtgtc acctacgtct ggctggtcgg
     3421 catcagcgcg gtggcgttgg tggccgccgt ttacctcaac atcctggagc ggcgacagcc
     3481 ggccgtggtg aacgaggagc cggtcgacct cggtgaactc caggcggaga tcggctgacc
     3541 cggggccgct gcgggccggc gccggtcggg ttcagcgatc ggggagctcc agcgccagcc
     3601 accggatgct cgcgggggag cccggctcga gactgaccac gactgcgccc ggctggccct
     3661 tgagcgaact cgcggtggcg cccgggtaga cggcgaggac cggttcctcc tggaccaccc
     3721 ggtggccgtg gaagtggccg agggcgacgt agtcccagtc gatcgccgct agttctgagg
     3781 gggccatggg cgagctgtgg tgggtcgggc gctcgtccgc ctggaccaga ccatggccgg
     3841 cgacgatgcc ccacatgccc tcgggcttcg gcgggatccc gaccaacggc cggaaccccg
     3901 gctcgtgttc gaccatggcc cg
//
LOCUS       DATGJT010000670         2606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_501942, whole genome shotgun sequence.
ACCESSION   DATGJT010000670 DATGJT010000000
VERSION     DATGJT010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501942"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            362..1762
                     /locus_tag="VKX24_11530"
     CDS             362..1762
                     /locus_tag="VKX24_11530"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HLJ09162.1"
                     /translation="MTDHAMGSLMVALMLLVLGAAVMGRLFVRLRQPKVVGELVAGIV
                     LGPSLLGHFAPGLANSIFAKGGPANPTGSVVSFLYQLGLLMLMFLSGSAVRHVLGKEN
                     RRATLLILGIGASIPFGVVLLLSPVLPLHDFAGTAGNNTAVLLIVAIGAAVCSIPFIS
                     KIFYDLGIMHTRFAGLLLGAAVLEDIALWGVIAIATTIAAATTAGHGHLGTTITEHIA
                     QNLAYFVLAMTLMPAVLRWLGNARWNAVAQTMPVVWMMAVLFGYVAIAAHFEVTIAWA
                     AFLAGFGIVGGMKGTERHRYQSAITAINDVSLAVFIPLYFAIVGYKLDFTKTFNPALL
                     IGFLVGSSVLRIGAVTLASRLAGFRGRPLVNLALTANARGGPGIVLASVAYDAHIINA
                     AFFTTLVVTAVVTSQVCGFWLDHVLRRGWSLLGTADDNDDNDDDGTAGVGVAVRPQRP
                     TEAPAGSRSPSLPSNG"
     gene            complement(1695..2564)
                     /gene="metF"
                     /locus_tag="VKX24_11535"
     CDS             complement(1695..2564)
                     /gene="metF"
                     /locus_tag="VKX24_11535"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019877421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HLJ09163.1"
                     /translation="MAKIADLLRAGRTYSFEFFPPRDDAAEAQLARTLAELEPLRPSF
                     VSITYGAGGSTRDRTQRLVVDILRRTTMTPMAHLTCVGHRRAELVDILQRYRRDGVEN
                     VLALRGDPPAGSSLADGELQRALELVELARELGPFSIGVAAHPEGHPQAPDRATDRRH
                     LAAKLSRADFAVTQFFFRSSDYVRLVDDLAALGVDKPVIPGIMPVTNVAQIERFAALS
                     GTEVPPGLRARLGAAAGDPAEVRRIGVAAATELCADLLAAGAPGLHFYTLNRSTATTE
                     IWSQLGLPSAAAA"
BASE COUNT          342 a          969 c          881 g          414 t
ORIGIN      
        1 gctcaacaaa ccggtcgtcg gcatggtgcc cttcgccgac ggctacctga tggtcggggc
       61 cgatggcggc atcttcgact tctccagcgc accgttcctc ggctcgctcg gggcgacgcc
      121 gcccgcccac cccatcgtgg ccgtggcgcc gctcagcagc tgacgcctga ccccgatccg
      181 ggaccgagag ggccgcccgc cagggcggcc ctcttgtttt tcccgtcgcc ctacggggcc
      241 ggcggagggt tccgcccccg cccgtcgaat actcgttcag gttccgttta ccgaaccgat
      301 cgagcgccgg atccgttcac cgatcgttta ccttccggcc cgaaccgctg gggagcaacc
      361 gatgaccgac cacgccatgg gctcgttgat ggtggcgctg atgctgctgg tgctcggagc
      421 cgccgtgatg ggccggctct tcgtccgtct gcgccagccg aaggtcgtcg gcgagctcgt
      481 cgccggcatc gtcctcggcc cgtcgctgct cgggcacttc gcccccgggc tggccaactc
      541 gatcttcgcc aagggcggcc cggccaaccc tacgggttcg gtggtgagct tcctctacca
      601 gctcggcctg ctgatgctga tgttcctgtc cggttccgcc gtccggcacg tcctcggcaa
      661 ggagaaccgc cgggcgacgc tgctgattct cgggatcggc gcctcgatcc ccttcggcgt
      721 cgtcctgctg ctgtcgcccg tcctcccgct gcacgacttc gccgggacgg ccgggaacaa
      781 cacggccgtg ctcctgatcg tggccatcgg cgccgccgtg tgctcgatcc ccttcatcag
      841 caagatcttc tacgacctcg ggatcatgca cacccgcttc gccggcctcc tgctcggcgc
      901 cgccgtcctg gaggacatcg ccctgtgggg cgtgatcgcc atcgccacca ccatcgccgc
      961 cgccacgacc gccggccacg gccacctcgg cacgaccatc accgagcaca tcgcccagaa
     1021 cctcgcctac ttcgtgctgg ccatgacgct catgcccgcc gtgctgcggt ggttgggcaa
     1081 cgcccgctgg aacgccgtcg cccagacgat gcccgtcgtg tggatgatgg ccgtgctctt
     1141 cggctacgtc gccatcgccg cccacttcga ggtgacgatc gcctgggccg ccttcctggc
     1201 cggcttcggg atcgtcggcg gcatgaaggg cacggagcgg caccgctacc agagcgccat
     1261 cactgccatc aacgacgtgt cgctggccgt gttcatcccc ctgtacttcg ccatcgtcgg
     1321 ctacaagctc gacttcacca agacgttcaa cccggcgctg ctcatcgggt tcctcgtcgg
     1381 ctcgtcggtc ctgcggatcg gggccgtgac cctcgcctcc cgcctcgccg gcttccgggg
     1441 gcgcccgctg gtcaacctgg ccctcacggc caacgcccgg ggcggccccg gcatcgtcct
     1501 ggccagcgtg gcctacgacg cccacatcat caacgccgcc ttcttcacca cgctggtcgt
     1561 gaccgccgtc gtgacgtcac aggtctgcgg cttctggctc gaccacgtgc tgcgccgggg
     1621 ctggtcgctg ctcggcaccg ccgacgacaa cgacgacaac gacgacgacg ggacggccgg
     1681 cgtgggggtc gcggtcaggc cgcagcggcc gacggaagcc ccagctggct ccagatctcc
     1741 gtcgttgccg tcgaacggtt gagggtgtag aagtgcagcc ccggggcgcc ggcggccagg
     1801 aggtcggcgc agagctcggt ggcggcggcc acgccgatcc ggcgcacctc ggcgggatcc
     1861 ccggcggcgg ccccgagccg ggcccgcagc cccgggggaa cctcggtccc cgagagggcg
     1921 gcgaagcgtt cgatctgggc cacattcgtg acgggcatga tcccggggat gaccggcttg
     1981 tcgacgccga gcgcggccag gtcgtcgacg aggcggacat agtcgctgct gcggaagaag
     2041 aactgcgtca cggcgaagtc cgcccgggac agcttggcgg ccaggtggcg gcggtcggtg
     2101 gcccggtcgg gcgcctgcgg atggccctcg gggtgggcgg cgacgccgat ggagaacggc
     2161 ccgagctccc gggcgagctc gacgagctcg agggcgcgct gcagttcgcc gtcggccaac
     2221 gacgagccgg cgggcgggtc gccccggagc gccagcacgt tctcgacgcc gtcgcggcga
     2281 tagcgctgca ggatgtcgac gagctccgcc cggcggtggc ccacgcaggt gagatgggcc
     2341 atcggcgtca tcgtcgtccg gcggaggatg tcgacgacga gccgctgcgt gcggtcccgc
     2401 gtcgaaccgc cggcgccgta ggtgatcgag acgaacgacg gccgcagcgg ttccagttcc
     2461 gccagcgtcc gggccagttg cgcctcggcg gcgtcgtccc ggggcgggaa gaactcgaac
     2521 gagtacgtcc ggccggccct cagcagatct gcgatcttcg ccacgcttcg gcatggtact
     2581 gccacccccg agccaccccc gaggcg
//
LOCUS       DATGJT010000671         2725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_921513, whole genome shotgun sequence.
ACCESSION   DATGJT010000671 DATGJT010000000
VERSION     DATGJT010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921513"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="VKX24_11540"
     CDS             complement(<1..539)
                     /locus_tag="VKX24_11540"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HLJ09164.1"
                     /translation="MGSGIRRSGAGLAVAVATAAVLGGCSSGTGRRAGVAAPAVPARP
                     TVFPVVDVPPAQVHRVAVESRGQAVALVRTSSATWLAEPGTPEAAIGLMAQTEDEILP
                     LQAYRRLDADPRRADFGLAEPEFAVRIQNGAGDEQVVSVGTTTFSGAGSYARREGDAG
                     HVYLLVRRTVDDLRSLLQG"
     gene            complement(545..2587)
                     /locus_tag="VKX24_11545"
     CDS             complement(545..2587)
                     /locus_tag="VKX24_11545"
                     /inference="COORDINATES: protein motif:HMM:NF025617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HLJ09165.1"
                     /translation="MIRATRAVARRELRSLVSLPHTYAIAAAFLTLSGIFFVTFLVQS
                     DLPDLEQYYSNIATTLLVLAPIIAMRSFAEERRAGGLDITLSWPVPRTALVAGKYAVT
                     LLYTWALLSVAWLYVRLLRGLGEVEVGKAVAGYVGILLLAAALGALALAVSARASSPT
                     GAAFMGFGLLLGLWTLQYAGRLLGAGLGGHVADLSPATHLEAAARGVIDGGDVAYFLT
                     CVVVGLGLAVHALDRQRPGVAGRLGRRRGARLGAVGALGVLLLVAGSSIEAQADLTPT
                     RRFTITRQTKEIAGRVHSPVHITGFVDPDSPTAVEMRALVRQYRAAHIPVDFDVVDPD
                     AQPGLAHAHGVSRYGEMLVEIGGRQEVVPDVGEVGLTSAILRLTRGTPAVACFTVGHG
                     EPDINDSRPAGYDSFAAYLHQLGYATEPLALGAPGGPARLARCTVVIAGPRIPLLPAE
                     LSMLTDHVRANGRLLIMADPDDPTRAQLNDLLRPFGMALGPGEVRDRSSLADDPASVV
                     AFSYPSESPPVRDLKRDGIPVLFVAPHPIEKATGGEAAKSLSPLVASSSHSSITGNPA
                     SGPFTLAALFDDSQVSDRPGGATLQTSRLAVVGSSAVASNRLVDSFGNRDFVAGLVQW
                     VGRETDVISAGRTFGGVHKIVLTSARRDHLVRSGIVFPALAVLLPMPVALLRLKRG"
BASE COUNT          388 a          972 c         1072 g          293 t
ORIGIN      
        1 tcgccctgga gcagcgaccg caggtcgtcg accgtgcgcc ggacgaggag gtacacgtga
       61 ccggcgtccc cctcccggcg ggcgtaggac cccgccccgg agaacgtcgt ggtcccgacg
      121 gagacgacct gctcgtcgcc cgcgccgttc tggatgcgga cggcgaactc gggctcggcc
      181 aggccgaagt ccgcccggcg ggggtcggcg tcgagccggc ggtaggcctg gaggggaaga
      241 atctcgtcct ccgtctgggc catcaggccg atggcggcct ccggcgtccc gggctcggcc
      301 agccaggtgg cgctcgaggt ccggaccagg gccaccgcct gcccccggga ctcgacggcg
      361 acgcgatgga cctgagccgg tggcacgtcg acaaccggaa agacggtggg ccgggccgga
      421 acggcggggg cggccacgcc cgcccgccgg cccgtcccgc tcgagcagcc gcccagcacg
      481 gccgctgtcg ccaccgccac cgccaacccg gccccgctcc ggcggatccc cgaccccatc
      541 ggcctcaacc ccgcttcagg cgcagcagcg ccacgggcat cgggaggagg acggccagcg
      601 ccgggaacac gatccccgag cgcacgagat ggtcccgccg ggcgctggtg aggacgatct
      661 tgtgcacccc gccgaacgtc cgcccggccg agatgacgtc ggtctcccgg ccgacccact
      721 ggacgaggcc ggccacgaag tcccggttgc cgaagctgtc gaccaggcgg ttggaggcca
      781 ccgccgagct ccccaccacc gccagccggg acgtctggag ggtggcgccg ccgggccggt
      841 cggacacctg gctgtcgtcg aagagggcgg cgagcgtgaa cggacccgaa gccgggttgc
      901 cggtgatcga gctgtgcgag ctgctggcca ccagcgggct gagcgacttg gccgcctcgc
      961 ctccggtggc cttctcgatc gggtgggggg cgacgaagag gaccgggatg ccgtcccgct
     1021 tcaggtcccg gaccggcggg ctctccgacg ggtaggagaa cgccaccacc gaggcggggt
     1081 cgtcggccag cgagctccga tcgcgcacct cccccgggcc gagggccatc ccgaagggac
     1141 gcaggaggtc gttgagctgg gcccgggtgg ggtcgtcggg atcggccatg atgagcagcc
     1201 ggccgttggc ccgcacgtgg tcggtcagca tgctgagctc ggcggggagg agcgggatgc
     1261 ggggaccggc gatgaccacc gtgcaccggg ccagccgggc cggcccgccc ggcgcgccca
     1321 gggccagcgg ctcggtggcg tagccgagct ggtgcaggta ggcggcgaag ctgtcgtagc
     1381 cggcggggcg gctgtcgttg atgtcgggct cgccgtggcc caccgtgaag caggccaccg
     1441 ccggcgtgcc ccgggtcagg cggaggatgg cgctggtcag ccccacctcg cccacgtcgg
     1501 ggacgacctc ctggcgcccg ccgatctcga ccagcatctc cccgtagcgg gacacgccgt
     1561 gggcgtgggc cagccccggc tgggcgtcgg gatcgacgac gtcgaagtcg accgggatgt
     1621 gggcggcccg gtactggcgc acgagggccc gcatctcgac ggccgtgggg ctgtcggggt
     1681 cgacgaagcc ggtgatgtgg acgggcgagt gcacccgccc ggcgatctcc ttcgtctggc
     1741 gggtgatggt gaagcgccgc gtcggcgtca ggtcggcctg ggcctcgatc gacgacccgg
     1801 ccaccagcag caggacgccg agggccccga ccgcgccgag ccgggcgccc cggcggcggc
     1861 cgagccggcc ggcgacgccc ggccgctggc ggtcgagggc gtggacggcg aggccgagcc
     1921 cgacgaccac gcaggtgagg aagtaggcga cgtcgccgcc gtcgatcacg ccccgggcgg
     1981 cggcctccag gtgggtggcg ggagagaggt cggcgacgtg gccgccgagg ccggcgccga
     2041 ggaggcggcc ggcgtactgc agcgtccaca ggccgaggag cagtccgaac cccatgaacg
     2101 ccgcaccggt cggagacgac gctcgggccg agacggccag cgccagggcc ccgagggcgg
     2161 cggccaggag caggatgccg acgtagccgg ccacggcctt gccgacctcg acctcaccga
     2221 ggccccgcag cagccggacg tagagccagg cgaccgacag cagggcccag gtgtagagca
     2281 gggtcacggc gtacttgccg gcgaccaggg cggtgcgggg gaccggccac gacagggtga
     2341 tgtcgagccc gccggcccgg cgctcctcgg cgaaggaccg catggcgatg atcggcgcca
     2401 gcaccagcag cgtggtggcg atgttcgagt agtactgctc gaggtcgggc aggtcgctct
     2461 ggaccaggaa cgtgacgaag aagatgcccg acagcgtcag gaaggcggcg gcgatggcgt
     2521 aggtgtgggg caggctgacg agcgaccgca gctcccggcg ggcgacggcc cgcgtggccc
     2581 ggatcacggc cgccccctct cgtcctccgg gtcggcggcc accgcctgcc ggaaggcgtc
     2641 ctcgagcacg tcggacagcg gctcgacggc ctccaccgac cagccggcca gcacgaactg
     2701 gcgcgtgagg gccggcaccg ctccg
//
LOCUS       DATGJT010000672         6694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1337329, whole genome shotgun sequence.
ACCESSION   DATGJT010000672 DATGJT010000000
VERSION     DATGJT010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6694
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337329"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VKX24_11550"
     CDS             complement(<1..189)
                     /locus_tag="VKX24_11550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09166.1"
                     /translation="MTLVTTLVIGLSLGAVYALLAAGITVVYQAARVPNVAIVAIGTV
                     AAVLHGDLMSSGGRFGSGF"
     gene            complement(186..542)
                     /locus_tag="VKX24_11555"
     CDS             complement(186..542)
                     /locus_tag="VKX24_11555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09167.1"
                     /translation="MALRTATALAAAMAAAMLAAPACGGTLEGKYRRGELTSTTTAPR
                     APVTSGTTAATAPAGPGAPGVPPASATTSTTAPTSGNATARAARGEPEGGESDGTIEG
                     SAAWRAVVQRSGGRHR"
     gene            621..1031
                     /locus_tag="VKX24_11560"
     CDS             621..1031
                     /locus_tag="VKX24_11560"
                     /inference="COORDINATES: protein motif:HMM:NF014132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HLJ09168.1"
                     /translation="MSAAVAKHPFLSDAWFDEVHRLHDAAGRAAPEGAEIRMNLVITA
                     TPFDGDLPMHMAATGGRADWGKGHLDDADVTLTLGYDTARAIFVDGNPQAAIEAFMAG
                     RIIVQGDITKLMAMQTGPGAAASELTKALQEITE"
     gene            complement(1234..3177)
                     /locus_tag="VKX24_11565"
     CDS             complement(1234..3177)
                     /locus_tag="VKX24_11565"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HLJ09169.1"
                     /translation="MRTSGVSDLVGRVLAGRYRLVAPIGTGASGRVYAAWDVKLQRKV
                     AVKVLHAALADDAGFLRRFGAEAQLAASLHHPNVVAVYDWGEDADPVATPQTPGPFMV
                     LELLEGGSLRGLLDRGDRLSPAQAAAVGRQIAAGLDYAHARGLVHRDVKPANLLFDEH
                     GTARVADFGLARALAEASWTEPAGAVLGTARYAAPEQVRGVVDARSDVYSLALVLVEA
                     VTGAVPFAGETSLATLLARVERHLEAPPELGALGPVLERAGRADPGGRFPDARSFAAA
                     LSAAAAALPAPDPIPLPGPGPAEFDPHPTEIAPPPPAPDETGVPPHPASVVEERQSAA
                     VARPVPEPPLVAVPVATERLGRPGGRPQRLIPFVVLAVLLLAAGTAAFAAVSASGPRA
                     RVPNLVGRSDAAARDAAKRAGVGVHVRTVPSDDPAGTVVGQSPAPGMLLAAHHSVTLR
                     LSAGPPPVALPGVANDTEADARAALEGAGFVVTTEHRTDENVPAGRVADQQPPAGKAA
                     PGSEVHLVISDGPKPVDVPNVVGKSYDDAVKALTAQRFKVTRTDEFSDSVPAGVVIRH
                     DPVPGTAAPRDSTVTVVVSKGPDLVTVEDFRGDTVEDAVAALEADGLQVDVVGYRPGR
                     LVKQQDPPGGTKLHRNQTVTLYL"
     gene            3231..3575
                     /locus_tag="VKX24_11570"
     CDS             3231..3575
                     /locus_tag="VKX24_11570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09170.1"
                     /translation="MEPDVVAFLENLCEMGFGWDEAALADLGDRLGALGPSPVAGLAH
                     GFGGLRLRVGMGDMPEPRRREVEAVVYPRLWKVLEAVRAGLPEGEQRVRVHVLNRRLA
                     RLLAAELQDKPV"
     gene            3572..3904
                     /locus_tag="VKX24_11575"
     CDS             3572..3904
                     /locus_tag="VKX24_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09171.1"
                     /translation="MRDRQWTVAAAAALLSLENVAVICGLLFRSHTSVVLLGVLLLKF
                     PLCRALLRLRVVAAAVLILWETFTMLVAVVNQSLAPPAELALFLSASAGSTLVALSLP
                     LFAPPSPE"
     gene            3938..4423
                     /locus_tag="VKX24_11580"
     CDS             3938..4423
                     /locus_tag="VKX24_11580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09172.1"
                     /translation="MDTPTPIRSLPAGRPSRRLPKARTFIVALGVLAAVDLLIVAGHG
                     GGQGQANPGGPLPAEIESLVPAPGSVIRPQEDVGADLKDTFTGALFIDEKRIPEDQTK
                     IVPGLGQVSFRPGPNKEFTALTPGNHHATILYWPQEKGDEDAARHAGALKSYTWQFTA
                     G"
     gene            complement(4440..6476)
                     /gene="ligA"
                     /locus_tag="VKX24_11585"
     CDS             complement(4440..6476)
                     /gene="ligA"
                     /locus_tag="VKX24_11585"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HLJ09173.1"
                     /translation="MEGDDLDVSVRIDELRELIRYHNRRYYELDEPEVSDAEYDALVR
                     RLLELEAEHPELVTEDSPTQRPGGAVTFSPVAHLVPMLSLDNAFDLDDLAAWGKRLER
                     LVPEPVAFVGEPKLDGLAISLVYERGRLVRAATRGDGVTGEDVTANVLTVKSVPRRLK
                     LASPPEVVEVRGEVFMPLESFAELNRRQGEAGKRLFANPRNAAAGSLRQLDPQITASR
                     NLAVYCYATGALEPDPGIATHWELLEWLAGAGVPVNDRIERFDTLTGVHDFAAAMLES
                     RHDLGYEIDGAVIKVDSLEQRRRMGSTSKAPRWAIAFKFPPEEKTTVLEHIFVSIGRT
                     GRATPFAALTPVFVGGSTVARATLHNEDEVARKDVREGDTVVVRKAGDVIPEVVAPVE
                     SLRPAGAVPWTFPAECPVCGHELVRLEGEADRYCVNLECPAQRVQRLFHFASRGAMDI
                     EGMGEKVCVQLTERDLVRDVADLYSLSLETLIGLERLAEKSATNLFEAIEASKKRPLA
                     KLLVGLGIRHVGPTAAIALAAELGHMDRIEQVSADELVEVAGIGPIIAESIAAFFAED
                     RNRTVVEKLRAAGVNLEGPPRPPSADGGEALPLAGLTFVLTGGLANRTREEAGAALEA
                     LGAKVAGSVSKKTSYVVAGANAGSKLAKAESLGVPVLDEGALEEILATGRPPAA"
     gene            complement(6499..>6694)
                     /locus_tag="VKX24_11590"
     CDS             complement(6499..>6694)
                     /locus_tag="VKX24_11590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09174.1"
                     /translation="GNVQLKWARPNPGYQVYVRDNGPDQVIVYFYTRNHISQVAAYYN
                     GSTPAFDVQESSISSQGGHH"
BASE COUNT          841 a         2396 c         2578 g          879 t
ORIGIN      
        1 gaagcccgag ccgaaccggc cgccggagct catgaggtcg ccgtggagga cggcggccac
       61 ggtgccgatg gccacgatgg cgacgttggg tacccgggcc gcctggtaga cgaccgtgat
      121 tccggcggcg aggagggcgt agacggcgcc gagcgacagg ccgatgacca gcgtcgtgac
      181 cagggtcacc ggtggcggcc tcccgaacgt tggacgacgg cgcgccaggc ggcgctcccc
      241 tcgatcgtac cgtccgattc gcccccttcc ggctcacccc gggcggcccg ggcggtggcg
      301 ttgccgctgg tgggagccgt cgtgctcgtg gtcgccgagg ccggcgggac gcccggcgcg
      361 ccggggcccg ccggcgccgt ggcggcggtg gtgcccgacg tcaccggcgc ccggggcgcg
      421 gtcgtcgtgc tggtcagctc gccgcgccgg tacttgccct ccagcgtccc gccgcaggca
      481 ggggcggcga gcatcgccgc ggccatcgcc gccgccaggg ccgtcgccgt ccgcagcgcc
      541 aatccgtccc cccgaaaccg cctcggtgcg gaaacggtcg agcttatagg gcgggctcga
      601 ccggcccggc cgcttcggta gtgtcagcgg ccgtggccaa gcacccgttc ctctccgacg
      661 cctggttcga cgaggttcac cggctccatg acgccgccgg ccgcgctgct cccgagggcg
      721 ccgagatccg gatgaacctc gtgatcaccg ccacgccgtt cgacggggac ctgcccatgc
      781 acatggccgc caccggcggc cgggccgact gggggaaggg ccacctcgac gacgccgacg
      841 tgacgctgac gctgggctac gacaccgccc gggcgatctt cgtcgacggc aacccccagg
      901 cggccatcga ggccttcatg gccgggcgca tcatcgtcca gggcgacatc accaagctga
      961 tggcgatgca gaccggcccc ggggcggcgg cctcggagct caccaaggcg ctccaggaga
     1021 tcaccgagta gacgcgcccg tgccccgagg gggtagggca tccgggcccg gtggcggctg
     1081 gggaacacca cccggcactc gcagacgctc ctaccccccc ggggcacgga acgtttgcga
     1141 tcctaacacg acccttcgga cgtgcaatcg atcccgtacc gggttgcggc acatgtccgg
     1201 aagtgggccc ggatgtcccg tcggagacgg cgctcagaga tagagcgtca ccgtttggtt
     1261 ccggtgcagc ttcgtcccgc cgggcgggtc ctgctgcttc acgaggcggc cgggccggta
     1321 gccgacgacg tcgacctgga ggccgtcggc ctcgagggcg gccacggcgt cctccaccgt
     1381 gtcgccccgg aagtcctcga ccgtcacgag gtcggggccc ttgctcacca ccaccgtcac
     1441 ggtcgagtcg cggggcgccg ccgtgccggg caccgggtcg tggcggatga ccacgccggc
     1501 cggcacgctg tcgctgaact cgtcggtgcg ggtgaccttg aaccgctggg cggtcagcgc
     1561 cttcacggcg tcgtcgtagc tcttgccgac cacgttgggg acgtcgacgg gcttcgggcc
     1621 gtcggagatc acgagatgga cctcgctgcc cggcgccgcc ttgcccgccg gaggctgctg
     1681 gtcggccacc cggccggcgg gaacgttctc gtcggtgcgg tgctcggtcg tgaccacgaa
     1741 gcccgctccc tcgagcgccg cccgggcgtc ggcctcggtg tcgttggcca cgccggggag
     1801 ggccaccggg ggcggccccg ccgagagccg cagggtcacc gagtggtggg cggcgagcag
     1861 catgccgggc gccgggctct ggccgacgac ggtgccggcc ggatcgtcgg acgggacggt
     1921 gcggacgtgg acgccgacgc cggcccgctt ggcggcgtcg cgggccgcgg cgtcgctccg
     1981 gccgaccagg ttggggaccc gggcccgggg gccgctggcc gacacggcgg cgaaggccgc
     2041 cgtccccgcc gccagcagca ggacggccag gacgacgaac gggatcagcc gttgcggccg
     2101 cccgccgggg cgccccaggc gctccgtcgc caccgggacg gccaccagcg gcggctcggg
     2161 aaccgggcgc gccacggccg cgctctggcg ttcctccaca acggacgcgg ggtgcggagg
     2221 gacgccggtc tcgtcgggcg ccggcggggg cggggcgatc tcggtcgggt gggggtcgaa
     2281 ctccgccggg cccgggccgg gcagcgggat ggggtcgggg gcggggaggg cggcggcggc
     2341 ggcggacagg gcggcggcga aggaccgggc gtcggggaag cggccgccgg ggtcggcccg
     2401 tccggcccgt tccagcaccg ggccgagggc gcccagctcc ggcggggctt cgaggtggcg
     2461 ctccacccgg gcgaggagcg tggccagcga cgtctcgccg gcgaagggca cggcgccggt
     2521 caccgcctcg accagcacca gggccagcga gtacacgtcg gagcgggcgt cgacgacccc
     2581 ccggacctgc tcgggggcgg cgtagcgggc cgtgccgagg acggcgccgg ccggctccgt
     2641 ccagctggcc tcggccagcg cccgggccag gccgaagtcc gccacccggg cggtgccgtg
     2701 ctcgtcgaag aggaggttgg ccggcttcac gtcgcggtgg acgagccccc gggcgtgggc
     2761 gtagtcgagg ccggcggcga tctggcgccc caccgccgcc gcctgggccg ggctgagccg
     2821 gtcgccccgg tcgaggaggc cccggaggct gccgccctcg aggagctcga ggaccatgaa
     2881 ggggcccggg gtctggggtg tcgccacggg gtcagcgtcc tcgccccagt cgtagacggc
     2941 cacgacgttc gggtggtgga gggaggcggc cagctgcgcc tcggcgccga agcggcgcag
     3001 gaagccggcg tcgtcggcca gggcggcgtg gaggaccttg accgccacct tgcgctggag
     3061 cttcacgtcc caggcggcgt agacccgccc gctggccccg gtgccgatgg gggccacgag
     3121 ccggtaccgg ccggccagga cgcggccgac gaggtcggag acgccgctcg tccgcatccc
     3181 acctaaggta ccggccgtcc cagtccagtc gggggagggc ccgggccagc gtggaaccgg
     3241 acgtcgtggc gttcctggag aacctctgcg agatgggctt cgggtgggac gaggcggcgc
     3301 tggccgacct cggcgaccgc ctgggggccc tcgggccgtc gccggtggcc gggctggccc
     3361 acggcttcgg cgggctccgg ctccgggtcg ggatgggcga catgcccgag ccccggcggc
     3421 gggaggtgga ggcggtggtc tacccccggc tgtggaaggt gctcgaggcg gtgcgggcgg
     3481 gattgccgga gggcgagcag cgagtccggg tgcacgtcct caaccggcgg ctggcccggc
     3541 tgctggcggc ggagctgcag gacaagccgg tgtgagggac cggcagtgga cggtggccgc
     3601 ggcggcggcg ctgctgtccc tggagaacgt ggccgtgatc tgcggcctgc tgttccggtc
     3661 ccacacctcg gtggtgctcc tcggcgtgct gctgctcaag ttcccgctct gccgggcgct
     3721 gctgcggctg cgcgtcgtgg ccgccgccgt cctcatcctc tgggaaacgt tcacgatgct
     3781 ggtggcggtg gtcaaccagt ccctcgctcc cccggcggag ctggcgctgt tcctgtcggc
     3841 cagcgccggg tcgacgctcg ttgccctctc gctcccgctg ttcgcccccc cgagccccga
     3901 atagcccggc gagcggctag aacgaagacg aagaaccatg gacacgccga ccccgatccg
     3961 atcgcttccc gccggccggc cgagccggcg cctcccgaag gcccgcacgt tcatcgtggc
     4021 gctcggcgtg ctcgcggccg tcgacctgct catcgtggcc ggccacggag gcggccaggg
     4081 ccaggcgaac ccgggcgggc cgctgccggc cgagatcgag tcgctggtgc ccgctcccgg
     4141 gtcggtgatc cgcccccagg aggacgtcgg cgccgacctg aaggacacgt tcaccggcgc
     4201 gctgttcatc gacgagaagc gcatccccga ggaccagacg aagatcgtcc ccgggctcgg
     4261 ccaggtcagc ttccggcccg ggcccaacaa ggagttcacc gccctcacgc ccggcaacca
     4321 ccacgccacg atcctctact ggccccagga gaagggcgac gaggacgccg cccgccacgc
     4381 cggggcgctc aagtcctaca cctggcagtt cacggccggc tgagcccggc cgcgccgggt
     4441 cacgccgccg ggggccggcc ggtggccagg atctcctcca gggcgccctc gtcgaggacg
     4501 ggcacgccga gcgactcggc cttggccagc ttcgagccgg cgttggcccc ggccacgacg
     4561 taggacgtct tcttcgacac gctcccggcc accttggcgc ccagcgcctc gagggccgcg
     4621 ccggcctcct cccgggtccg gttggccagc ccgccggtga ggacgaacgt caggcccgcc
     4681 agcggcaggg cctcgccgcc gtcggccgac ggcggccggg gcgggccctc gaggttgacg
     4741 cccgccgccc ggagcttctc gaccaccgtg cggttccggt cttcggcgaa gaaggcggcg
     4801 atgctctcgg cgatgatcgg gccgatgccc gcgacctcga cgagctcgtc ggccgaaacc
     4861 tgctcgatgc ggtccatgtg gccgagctcg gcggccaggg cgatggccgc cgtcgggccg
     4921 acgtggcgga tgccgaggcc gacgagcagc ttggccagcg gacgcttctt cgacgcctcg
     4981 atggcctcga acaggttcgt ggccgatttc tccgccagcc gctcgaggcc gatgagcgtc
     5041 tcgagcgaca gcgagtagag gtcggcgacg tcgcggacca ggtcgcgctc ggtcagctgg
     5101 acgcagacct tctcccccat gccctcgatg tccatcgccc cccgggaggc gaagtggaac
     5161 aggcgctgca cccgctgggc cggacactcc aggttcacgc agtagcggtc ggcctcgccc
     5221 tcgagccgga cgagctcgtg gccgcagacc gggcactcgg cgggaaaggt ccaggggacg
     5281 gcgccggccg gccggagcga ctccaccggg gccacgacct cggggatgac gtcgccggcc
     5341 ttgcggacga cgacggtgtc gccctcccgg acgtccttgc gggccacctc gtcctcgttg
     5401 tggagcgtgg cccgggccac cgtcgacccg cccacgaaca ccggggtcag cgcggcgaag
     5461 ggcgtggccc ggcccgtccg cccgatgctg acgaagatgt gctcgaggac cgtcgtcttc
     5521 tcctccggcg ggaatttgaa ggcgatggcc caccgggggg ccttgctggt cgaccccatc
     5581 cggcgtcgct gctccaggct gtcgaccttg atgacggcgc cgtcgatctc gtagccgagg
     5641 tcgtggcggg actcgagcat ggcggcggcg aagtcgtgga cgccggtcag ggtgtcgaag
     5701 cgctcgatgc ggtcgttgac cgggacgccg gcgccggcca gccactcgag gagctcccag
     5761 tgggtggcga tgcccgggtc gggctcgagg gcgccggtgg cgtagcagta gacggccagg
     5821 ttccggctgg cggtgatctg ggggtccagc tggcgcagcg acccggcggc ggcgttgcgg
     5881 gggttggcga agaggcgctt gccggcctcg ccctggcggc ggttgagctc ggcgaacgat
     5941 tccagcggca tgaagacctc gccccggacc tcgacgacct cgggcggcga ggccagcttc
     6001 aggcgccggg gcaccgactt cacggtgagg acgttggcgg tgacgtcttc accggtcacc
     6061 ccgtcgcccc gggtggccgc ccggacgagc cggccccgct cgtagaccag cgagatggcc
     6121 aggccgtcga gcttcggctc gccgacgaag gccaccggct cggggaccag ccgctccagg
     6181 cgcttgcccc aggcggcgag atcgtcgagg tcgaaggcgt tgtcgagcga cagcatcggc
     6241 accaggtggg ccaccgggct gaacgtgacc gcaccgccgg gccgctgcgt cggcgagtcc
     6301 tcggtgacga gctcgggatg ctcggcctcg agctcgagga ggcgccggac gagggcgtcg
     6361 tactcggcgt cggagacctc cggctcgtcg agctcgtagt agcgccggtt gtggtaccgg
     6421 atcagctccc ggagttcgtc gatgcggacg ctgacatcga ggtcgtcgcc ttccacggcg
     6481 acgacgttac cgtcggggct agtggtgccc gccctggctg gagatcgagg actcctgcac
     6541 gtcgaaggcc ggggtgctgc cgttgtagta ggcggcgacc tgcgagatgt ggttcctcgt
     6601 gtagaagtag acgatcacct ggtcgggccc gttgtcgcgg acgtagacct ggtagccggg
     6661 gttcggccgg gcccacttga gctgcacgtt gccg
//
LOCUS       DATGJT010000673         2970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1229578, whole genome shotgun sequence.
ACCESSION   DATGJT010000673 DATGJT010000000
VERSION     DATGJT010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1229578"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VKX24_11595"
     CDS             <1..465
                     /locus_tag="VKX24_11595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013133789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HLJ09175.1"
                     /translation="MNMLERERLTSKKISKTQAVTSQLRRGIGADNIHIGPSDHVPWL
                     EDRKWAHIRIEGREFGDVPITVDLKLEVWDSPNSAGVVIDAIRCIRLALDAGVGGALL
                     GPSAYFMKSPPVQYSDEVARQMVEEYIRSVGMGNPRLDTVVDEVNLQLNEVH"
     gene            598..1998
                     /locus_tag="VKX24_11600"
     CDS             598..1998
                     /locus_tag="VKX24_11600"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011434653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004351 - glutamate decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006540 - glutamate decarboxylation to
                     succinate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HLJ09176.1"
                     /translation="MVLHRHVSGEEATTRLGVRPQFALPAELAEIPRLRMPARGMGPE
                     VAYQVVHDELLLDGNARLNLATFVSTWMDHRADALLLECANKNMIDKDEYPQTAELEH
                     RCVNILADLWHASAAEDATGCSTTGSSEACMLGGMALKWRWRQRRQAAGHAADRPNLV
                     MGSNVQVCWEKFCRYWEVEARLVPVGPTAGGATHLTAESAVAHCDENTIGVVAVLGST
                     YDGAYEPVLEIANALDELCDGKDWDIPIHVDGASGAFVAPFVDPDLVWDFRVPRVASI
                     NTSGHKFGLVYPGVGWVVWRDASALPEDLVFKVDYLGGEMPTFALNFSRPGAQVAAQY
                     YNFLRLGFDGYHRVMLACRETARWLAHQIHHLGPFELVSEGDGIPAFAFRMKEGTPYT
                     VFDVSDAIRALGWLVPAYRMPPGMEDMAVLRVVVRDDLSRDLAARLVEHLRRVTEHLE
                     TRSSGQPEKPRTGFHH"
     gene            complement(2008..2784)
                     /locus_tag="VKX24_11605"
     CDS             complement(2008..2784)
                     /locus_tag="VKX24_11605"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ09177.1"
                     /translation="MSRLPPPPDDWYVAVARHLGEAYLRYEFTAGTAQEVDFIAETLA
                     TAPGERLLDVGCGPGRHAVEFSRRGLQVTGIDISPEFVALAHRSAAEAGVTPSFFTMD
                     ARELPFDSEFDVAICLNEGGFGLGLPDLQILRGIRKALKHGGRLALGAANLFYVLKHG
                     GVLCPASEPLPVGALPAEGEFDPVKVLYKARVDGVAGADGAPASFEMWNSCYTPRELE
                     WIGNGAGLDPEAVFGIAPGAYGRDRPTMDHPELLLIARRP"
     gene            complement(2781..>2970)
                     /locus_tag="VKX24_11610"
     CDS             complement(2781..>2970)
                     /locus_tag="VKX24_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015491520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HLJ09178.1"
                     /translation="LMALRPALDGRQVMAHLDIKPGPRVGQALAFLMEIRLDEGEISE
                     EEAYRRLDEWWAAEQAAT"
BASE COUNT          447 a         1082 c         1022 g          419 t
ORIGIN      
        1 atgaacatgc tcgagcggga gcggctgacc tccaagaaga tctctaagac gcaggcggtc
       61 acctcgcagc tgcgccgggg catcggcgcc gacaacatcc acatcggccc gtcggaccat
      121 gtgccgtggc tcgaggaccg caagtgggcg cacatccgga tcgagggccg ggagttcggc
      181 gacgtgccga tcactgtcga cctgaagctc gaggtctggg actcgcccaa ctcggcgggg
      241 gtcgtcatcg acgcgatccg ctgcatccgg ctcgccctcg acgccggcgt cggcggggcg
      301 ctgctcggcc cctcggcata cttcatgaag tccccgccgg tgcagtactc ggacgaggtc
      361 gcccggcaga tggtcgagga gtacatccgc tcggtcggca tgggcaaccc gcggctcgac
      421 accgtcgtcg acgaggtgaa cctccagctg aacgaggtcc attaggcgtc caccccgggg
      481 ctcggcaatt gaggcccggg ggacagtagc cacgtcgccg cctcgcccgg cggccccacc
      541 ggccgccggg taggcttcgg ccccggggag ttcaacgggg ggagacagga ggcggcgatg
      601 gtgctccacc gtcacgtgtc gggcgaagag gccacgacca ggctaggcgt ccgtccacag
      661 tttgcgctgc cagccgagct ggccgagata ccccggttgc ggatgcctgc ccgggggatg
      721 ggtcccgagg tcgcctacca ggtcgtccat gacgagttgc tgctcgacgg caacgcccgg
      781 ctcaatctcg ccaccttcgt cagcacctgg atggaccacc gggccgacgc gctcctgctg
      841 gagtgcgcca acaagaacat gatcgacaag gacgagtacc cgcagaccgc ggagctcgaa
      901 caccgctgcg tcaacatcct cgccgacctg tggcacgcct ccgccgccga ggacgccacc
      961 ggctgctcga cgaccggctc gagcgaggcg tgcatgctcg gcggcatggc gctcaagtgg
     1021 cgctggcgcc agcgccgcca ggccgccggc cacgctgccg accggcccaa cctggtgatg
     1081 ggctccaacg tccaggtgtg ctgggagaag ttctgccgtt actgggaggt cgaggcacgg
     1141 ctggtcccgg tcggcccgac cgcagggggg gcaacccacc tgaccgccga gtcggccgtc
     1201 gcccactgcg atgagaacac catcggcgtc gtggccgtac tcggctcgac ctacgacggc
     1261 gcctacgagc cggtgctcga gatcgccaac gccctcgacg agctctgcga cggcaaggac
     1321 tgggacatcc cgatccacgt cgacggggcc tccggcgcat tcgtcgcgcc gttcgtcgac
     1381 ccggacctgg tctgggactt ccgggtcccc cgggtggcct cgatcaacac ctcgggccac
     1441 aagttcggac tggtctaccc cggggtcggc tgggtggtgt ggcgggacgc cagcgccctg
     1501 cccgaggacc tggtgttcaa ggtcgactac ctcggcggcg agatgcccac cttcgccctc
     1561 aacttctccc gccccggggc acaggtcgcc gcccagtact acaacttcct gcggctcggc
     1621 ttcgacggct accaccgggt gatgctcgcc tgccgggaga cggcgaggtg gctggcccac
     1681 cagatccacc acctgggtcc gttcgagctg gtgtccgagg gcgacggcat cccggccttt
     1741 gcgttccgca tgaaggaggg caccccgtac accgtgttcg acgtgtccga cgccatccgc
     1801 gccctgggct ggctggtgcc cgcctaccgg atgccgccgg ggatggagga catggccgtg
     1861 ctccgggtcg tcgtccggga cgacctgagc cgggaccttg ccgcaaggct ggtcgagcac
     1921 ctgcgccggg tgaccgagca cctcgagacc cggagctccg gccagccgga gaaaccgagg
     1981 accggcttcc accactgacc ctcgccgcta cgggcgccgg gcgatcagga gcagctcggg
     2041 gtggtccatc gtcgggcgat cccggccgta ggcgccgggg gcgatgccga agaccgcctc
     2101 cgggtcgagc ccggccccgt tgccgatcca ctccagctcc cgcggcgtat agcaggagtt
     2161 ccacatctcg aagctggccg gcgcgccgtc ggcccccgcc acgccatcga cccgggcctt
     2221 gtagagcacc ttcaccgggt cgaactcgcc ctcggcgggg agggcgccca ccggcagcgg
     2281 ctccgacgcc gggcacagca cgccgccgtg cttgagcacg tagaacaggt tggccgcccc
     2341 gagggccagc cggcccccgt gcttcaatgc cttccggatg ccgcggagga tctgcaggtc
     2401 gggcaacccc aggccgaagc cgccctcgtt caggcagatc gccacgtcga actcgctgtc
     2461 gaagggcagc tcccgggcgt ccatcgtgaa gaacgacggc gtcaccccgg cctctgccgc
     2521 cgaccggtgc gccagggcga cgaactccgg cgagatgtcg atgccggtga cctgcaggcc
     2581 gcgccgggag aactcgacgg cgtgccgtcc cggcccgcac cccacgtcga gcagccgctc
     2641 gccgggggca gtcgccagcg tttcggcgat gaagtcgacc tcctgggccg tgccggccgt
     2701 gaactcgtag cgcaggtagg cctcgccgag gtgccgggcg acggcgacgt accagtcgtc
     2761 gggcgggggc gggagccggc tcatgtcgcc gcctgctcgg ccgcccacca ttcgtcgagc
     2821 cgccggtacg cctcctcctc ggagatctcg ccctcgtcga ggcggatctc catcaggaag
     2881 gccagggcct ggccgacccg cgggccgggc ttgatgtcca ggtgggccat cacctgccgc
     2941 ccatcgagcg ccggccgcag cgccatcagc
//
LOCUS       DATGJT010000674         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1441384, whole genome shotgun sequence.
ACCESSION   DATGJT010000674 DATGJT010000000
VERSION     DATGJT010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1441384"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VKX24_11615"
     CDS             complement(<1..423)
                     /locus_tag="VKX24_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015614840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09179.1"
                     /translation="MMASPTTMHDVETRTAVPRPRLLSRVPEATALFWLTKVLTTGMG
                     ETTSDYLAHRFNPYVAVAFGAAGLAVALPLQLRARRYVAWRYWLTVVMVAVFGTMAAD
                     FLHVVVGVPYWASTALYVVVLGAVFLAWQRSEKTLSIHS"
     gene            593..1990
                     /locus_tag="VKX24_11620"
     CDS             593..1990
                     /locus_tag="VKX24_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011718889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin reductase family protein"
                     /protein_id="HLJ09180.1"
                     /translation="MRTASPPDRRPSDASERIPVTSPIAHLPQPRREGLVAAVVAVGA
                     VAVLGFWWGDTASGALHSTADRLTAAGRITGLLGTYLVLVEVLLMSRLPWLDRLIGMD
                     RLATWHRRNGEYCIWLLGAHTLFTIWGYAGADHTGLLHETALTLALPDMVTATVAFFA
                     LVAVGVLSARAVRRRVGYQTWYTVHLVTYLAIVASFAHVLSDGNDFVDHPLNRALWIA
                     MYAVVAVLVLVHRVGRPVRNAWRHRLVVDRVVPEAPGVVSIYVTGRNLDDLAARPGQF
                     LTWRFLTRRGWWQAHPFSLSAAPNGRYLRITVKASGDHTAELQRLRPGVRVLAEGPFG
                     AFTADRRTRRRVLLVAGGIGIAPLRPLFETLPARPGDLTLLYRTSRPEDAVFGEELEA
                     IARERGARVLYRHGSRHRPPDPFSPAALRSLLPDLVDHDVFLCGPPGMIESARGGLRA
                     AGVPARQIHAEAFEL"
     gene            1987..>2262
                     /locus_tag="VKX24_11625"
     CDS             1987..>2262
                     /locus_tag="VKX24_11625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09181.1"
                     /translation="MKTLLRRAAATALGTMLGVSLLVAAKSAPSGPRLALTEPGVIGR
                     RPAAPVPKTPATTAPPPPSTTTSSTPAPTSSSTVTTAAPAPPPPPPTA"
BASE COUNT          282 a          865 c          803 g          312 t
ORIGIN      
        1 gctgtggatc gaaagcgtct tctcgcttct ctgccaggcg aggaagacgg caccgagcac
       61 gacgacgtac agggcggtgg acgcccagta ggggaccccc accacgacat ggaggaagtc
      121 ggcggccatc gtgccgaaga cggccaccat gacgaccgtg agccaatacc gccaggcgac
      181 gtaccggcgg gcccggagct ggagcggcag ggccacggcg aggccggcgg cgccgaaggc
      241 gacggcgaca taggggttga agcggtgggc gaggtagtcc gaggtcgtct cgcccatccc
      301 ggtggtcagc accttcgtca gccagaacag ggccgtcgcc tcgggcaccc ggctcaagag
      361 gcggggcctc ggcacggcgg tccgcgtctc gacgtcatgc atggtggtgg gggaagccat
      421 catgagcgcc agtgtccgga ggcggtgatg agataccaat gagctgttca gcggcgcgac
      481 tgagggtcgc ctgacgccgc gtttcggcgg agcggccgaa cgaagcagga accgggcgaa
      541 tcgccgccga acgggggtga tggcccattc cccgtcccga ccccggagca cgatgcggac
      601 cgcctcgccg cccgaccgtc gcccgtccga cgcctcggag cggatacccg tcacgtcgcc
      661 gatcgcccac cttccccagc cccgccggga gggtctcgtg gccgccgtcg tggccgtcgg
      721 ggcggtggcc gtgctgggat tctggtgggg cgacaccgcc tccggggcgc tgcattccac
      781 cgccgaccgg ctcaccgccg cggggcgcat caccggcctg ctcgggacct acctggtgct
      841 cgtcgaggtc ctgctcatga gccggctgcc gtggctcgac cggctgatcg ggatggaccg
      901 cctggccacc tggcatcgcc gcaacggcga gtactgcatc tggctgctcg gcgcccacac
      961 cctgttcacg atctggggct acgccggcgc ggaccacacc ggcctcctgc acgagacggc
     1021 gctcacgctg gccctgcccg acatggtcac ggccaccgtc gccttcttcg ccctcgtggc
     1081 ggtcggcgtg ctgtcggccc gcgccgtgcg ccgccgggtc ggctaccaga cctggtacac
     1141 ggtccacctg gtcacctacc tggcgatcgt cgcctccttc gcccacgtcc tctccgacgg
     1201 caacgacttc gtggaccacc cgttgaaccg ggcgctgtgg atcgccatgt acgccgtcgt
     1261 ggcggtgctg gtgctcgtcc accgggtggg ccggccggtc cgcaacgcct ggcgccaccg
     1321 gctcgtcgtg gaccgggtcg tgcccgaggc ccccggggtg gtgtcgatct acgtgaccgg
     1381 tcgcaacctc gacgacctcg ccgcccggcc gggccagttt ctgacctggc ggttcctgac
     1441 ccgacggggc tggtggcagg cgcacccctt ctcgctctcg gccgccccga acgggcggta
     1501 tttgcggatc accgtcaagg cgtcgggcga ccacaccgcc gagctgcagc ggctgaggcc
     1561 cggggtccgg gtcctggccg aggggccctt cggcgccttc accgccgacc ggcgcacgcg
     1621 gcgccgcgtg ctgctggtcg ccggcgggat cggcatcgcc ccgctgcggc cgctgttcga
     1681 aacgctgccc gcccgtcccg gcgacctgac gttgctgtac cggacgtcgc gcccggagga
     1741 cgccgtcttc ggggaggagc tcgaggcgat cgcccgggag cggggcgccc gcgtcctcta
     1801 ccggcacggg tcccgccacc ggccgccgga ccccttcagc ccggcggcgc tgcggtcgct
     1861 cctgcccgac ctggtcgacc atgacgtctt cctctgcggt ccgccgggga tgatcgagag
     1921 cgcccggggc ggcctgcggg cggcgggcgt ccccgcccgc cagatccacg ccgaggcctt
     1981 cgagctgtga agacgctgct ccggcgggcg gccgccaccg ccctcggcac gatgctcggc
     2041 gtgtcgctcc tcgtggcggc caagagcgca ccgtccggtc cccgcctggc gctgaccgag
     2101 cccggcgtca tcggccggcg gccggcggcg cccgtcccga agacgccggc gacgaccgcc
     2161 ccgccgcccc cgtcgacaac gacgtcgtcg acgccggcgc ccacgtcgtc ctcgacggtg
     2221 acgacggccg ccccggcccc gcctccgcca ccgcccacgg cg
//
LOCUS       DATGJT010000675         6572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_609091, whole genome shotgun sequence.
ACCESSION   DATGJT010000675 DATGJT010000000
VERSION     DATGJT010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6572
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_609091"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..457)
                     /locus_tag="VKX24_11630"
     CDS             complement(86..457)
                     /locus_tag="VKX24_11630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09182.1"
                     /translation="MLLVRCEDVALILPRAVDVGEPVEEAVQHHVNSCLVCQAELARY
                     HKLLKALRTMRTQLVMPAPGTLAMTLAALQEAQERRAIRSLVSGRRGAYIGAIGGAAV
                     AAGAAAAAVALARRRAPRLAG"
     gene            complement(438..1004)
                     /locus_tag="VKX24_11635"
     CDS             complement(438..1004)
                     /locus_tag="VKX24_11635"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLJ09183.1"
                     /translation="MSQEELVAAARDGDQQAFEELVRQTYVATYTLAFRLTGNEEDAR
                     DVVQETYLRAWKAIRRFRGDAQFSTWLYRITANTSSSMTQRRSRNRTDSLDDQGPEVV
                     DDRPFANPEASSEASALHQRLSEAVAELPPKLRTIVVLKDVYDLPHEAIAEELGISVA
                     AAKVRLHRARKRLRDVLFEERGGVARAV"
     gene            complement(1105..1266)
                     /gene="rpmG"
                     /locus_tag="VKX24_11640"
     CDS             complement(1105..1266)
                     /gene="rpmG"
                     /locus_tag="VKX24_11640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HLJ09184.1"
                     /translation="MASDKRVKITLACEVCKRRNYITVKNKQNDRERMAIKKYCRWDK
                     QHTLHRETR"
     gene            complement(1291..1366)
                     /locus_tag="VKX24_11645"
     tRNA            complement(1291..1366)
                     /locus_tag="VKX24_11645"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1331..1333),aa:Met,seq:cat)
     gene            complement(1378..1450)
                     /locus_tag="VKX24_11650"
     tRNA            complement(1378..1450)
                     /locus_tag="VKX24_11650"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1415..1417),aa:Thr,seq:ggt)
     gene            1671..2330
                     /locus_tag="VKX24_11655"
     CDS             1671..2330
                     /locus_tag="VKX24_11655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09185.1"
                     /translation="MMVLAAAVASAGLLTTAALASPSAPPNGSYGASNGSGQPAASGS
                     GYGSGTSSGTGSSSAGSSTGSSDQSSGGYSSAPSSGSSGGSSSGSSGGYSGAPSGGSS
                     GGTSGGSADGSGYSDGTGSTGGSGSSDGPGYSDGTGSSDGSGYSDTTGGSGYSDGTGG
                     SGYSDGGSASDSGAGASDSSSQSGGKKNKNGKVKKSKGQTKSGKSTKSAKGTKANKPA
                     K"
     gene            complement(2563..2644)
                     /locus_tag="VKX24_11660"
     tRNA            complement(2563..2644)
                     /locus_tag="VKX24_11660"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2608..2610),aa:Tyr,seq:gta)
     gene            2666..3154
                     /locus_tag="VKX24_11665"
     CDS             2666..3154
                     /locus_tag="VKX24_11665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HLJ09186.1"
                     /translation="MPSFDVVSQVDMQEVRNALDQTHREIANRFDFKGTESTIDLSGT
                     EITLHSNSEQRLKALVQVMEEKFVRRNVPLKALAYGKIQEAAKGAARQVVTLNVGISD
                     EKAREINKFIKAEAPKGVQSQVQGDQLRVTGKKKDDLQATIAALKGHDFDVPLQFTNF
                     RD"
     gene            complement(3155..4018)
                     /locus_tag="VKX24_11670"
     CDS             complement(3155..4018)
                     /locus_tag="VKX24_11670"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015758962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HLJ09187.1"
                     /translation="MSTNTIKTYTLLAALGGFLILVGGAAGGSGGLMIGLLLGLALVG
                     GSYWFSDTIAVKAARAVPVTEAEAPALYRIVSELTTRADMPMPRLYVTPSMQPNAFAT
                     GRSPEHASVACTQGIPQMLSEDELKGVLAHELSHVGNRDILIGSVAAAIAMAITFIAR
                     MAMFGAMFGGGGGRKRSNPLGELAFALLAPVAAMLLQMALSRSREFEADRSGALLLGT
                     GEPLARALEKIEAGAKAIPMDVNPAQAQAYIVNPLTGRQMSFAKMFTTHPPTEERIAR
                     LRRMRQGAAQF"
     gene            complement(4142..4621)
                     /locus_tag="VKX24_11675"
     CDS             complement(4142..4621)
                     /locus_tag="VKX24_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018487442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09188.1"
                     /translation="MEPHWTWRAGPVAPGAAVVVDIDGVLSDAARRQHYLEEPWPDWR
                     GFFDACGEDPVIEEVKILLELLDPALRVLLLTGRPARVHHLTEAWLGRYGIRWDALLM
                     RRGGDYAQAREFKEDAVAELRNRGFDLRLAFEDDRRNAEMFRHAGVPCIYIHSGYYD"
     gene            complement(4624..5718)
                     /locus_tag="VKX24_11680"
     CDS             complement(4624..5718)
                     /locus_tag="VKX24_11680"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HLJ09189.1"
                     /translation="MEAALYDPDGGFFAGTGGGAGRAEGDFVTSVEVGSLFGALVARA
                     IDGWWDGLGRPDPFLVVDAGAGRGQLARDVLRAGPRCAPALRYVLVERSARLRAAQGE
                     HLSLEPAELALGPAVPPEPDEEPVAVPGSGPVVTALGELPAGPAVAVVIANELADNLP
                     FRIVERTADGWNEVRVTAGADGFGPLVLPAEEPLAAAAGRLAAGRDVPVGARLPLPTA
                     LAEWIRSAAAMLRRGVIAVVDYAAPVEDLAARGQDGWLRTYRAHHRSGSPFDRPGAQD
                     ITADVPVEALHRAAAAAGLAVLDETTQGQWLRSLGVDELVEAARAAWHGRSATDLAAV
                     AARSRVHEADALLDPAGLGAHRVTILGKRV"
     gene            complement(5797..>6572)
                     /locus_tag="VKX24_11685"
     CDS             complement(5797..>6572)
                     /locus_tag="VKX24_11685"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HLJ09190.1"
                     /translation="YEGAPTPVTAFLSVASKTGGFVALLSLVYVGFFGRGDAWQPILW
                     VLAAASMTVGNLIALRQTNLVRMLAYSSIAQGGFMLVPFAVANQGDGSARPGAFSATI
                     VYLLIYGAMNLGAFAVLIGVARKTRSAEIDSYAGLFEYAPALAVLMSLFLFSLAGIPP
                     LAGWYAKLVVFKAVIDAGTAQAVTLGVVAAVNSVVALFYYARVAALMWFRPAPAEPGS
                     GRIPAALGAAIALPAAVVLVIGVYPNLFARLGELATRGL"
BASE COUNT          996 a         2285 c         2393 g          898 t
ORIGIN      
        1 ctactgccct cggacgcgct tgggggcgcc agtggaggat agcagcgggc acactcccga
       61 tagccaccgt cctggtggcg ggacctcaac cggcgaggcg gggggcccgg cggcgggcca
      121 gggccacggc ggcggcggcc gctccggcgg ccacggcggc accgccgatg gcgccgatgt
      181 aggcgccccg ccggccgctc accagcgacc ggatcgcccg ccgctcctgg gcctcctgga
      241 gcgcggccag cgtcatggcc agggtcccgg gggccggcat gaccagctgc gtccgcatcg
      301 tccgcagcgc cttgagcagc ttgtggtagc gggccagttc tgcctggcac accaggcagg
      361 agttcacgtg gtgctgcacg gcttcctcga ccggctcacc cacgtcgacg gcccgcggca
      421 ggatcagggc gacgtcctca caccgcacga gcaacacctc cccgctcctc gaagagcacg
      481 tcccgcaggc gcttgcgggc ccggtgcagg cgaaccttgg ccgccgccac cgaaatcccg
      541 agctcctcgg cgatcgcctc gtgggggagg tcgtagacgt ccttcagcac cacgatggtc
      601 cggagcttgg gcgggagctc ggccacggcc tcggagagcc gctggtggag cgccgacgcc
      661 tcggagctgg cctcggggtt ggcgaagggg cggtcgtcca cgacttcggg accctgatcg
      721 tcgagcgagt cggtccggtt gcggctgcgc cgctgggtca tcgaggacga cgtgttggcc
      781 gtgatccggt acagccacgt cgagaactgg gcgtcaccgc ggaagcgccg gatggccttc
      841 caggcgcgga ggtaggtctc ctgcaccacg tcgcgtgcgt cctcctcgtt cccggtgagc
      901 cggaaggcga gggtgtaggt ggcgacgtag gtctggcgga ccagttcctc gaacgcttgc
      961 tggtcaccgt cgcgggcggc ggcgaccaac tcctcttggc tcaacgggtc tctcccgtcg
     1021 tctcgatacc ggttggactg cgcgacgggt gtcaacgtta cgcgactcca ggcgacccag
     1081 cgtggtggcc gcccgtggtt ccggtcagcg ggtctcgcgg tgaagagtgt gctgcttgtc
     1141 ccagcggcag tacttcttga tggccatgcg ctcccggtcg ttctgcttgt tcttgaccgt
     1201 gatgtagttc cggcgcttgc agacctcgca ggccagggtg atcttcaccc gtttgtcgct
     1261 cgccatcgga ccttccactc cctgtcgatt tggtagcggt gggcggactc gaaccgccga
     1321 cgccgcgatt atgagccgcg tgctctgcca actgagctac accgccatgg agttctgagc
     1381 ccccttacgg aatcgaaccg tagacccctt ccttaccatg gaagtgctct gccgtctgag
     1441 ctaagggggc gcgcccggag cattgtagtc gccccggcgc accggccgtt atgcccgccg
     1501 ggcacccgcc ggactggccc gttcgggcaa atctttgtga aacagaagtt attcctggtg
     1561 tttttggggt aagagaggct aaagagaggg agaaacatgt cgcgccctct cgggtccgac
     1621 ttcaaaccca gggaggacgc cccatgatcc gacccactcc gaaccgtcga atgatggtcc
     1681 tcgcggccgc cgtcgcctcg gccggcctgc tgaccaccgc cgcgctggcc tcgccctccg
     1741 ccccgccgaa cggaagctac ggcgcctcca acgggtcggg gcagcccgcg gcgtcgggca
     1801 gcggctacgg atccgggacg tcctctggca ctgggtcgtc gtcggcgggc agctccacgg
     1861 gctcgtccga ccagagctcc ggcggctact cgagcgcccc ctccagcggc agctcgggcg
     1921 gtagctccag cggtagctcg ggcggctact cgggcgcgcc gtccggcggc agctccggtg
     1981 gcacctccgg cgggtcggcc gacggctccg gctactcgga cggcaccggg tccaccggcg
     2041 ggagtggctc gtcggacggc ccgggctact ccgacgggac cggctcctcg gacgggagcg
     2101 ggtactccga caccaccggc ggctccggct attccgacgg gaccggcggc tccgggtact
     2161 cggatggcgg ttcggcgtcc gacagcggcg ccggggcgtc cgacagcagc tcgcagagcg
     2221 gcggcaagaa gaacaagaac ggcaaggtca agaagtcgaa gggccagacg aagtccggca
     2281 agtcgacgaa gtcggccaag ggcacgaagg ccaacaagcc cgccaagtag gccggagtcg
     2341 gtcgccggcg ggagtccctc ccgccggctt ttcacagttc gtccgggcca tgatcccggt
     2401 catgctgacg ttggcgtgca tggatccgac gtggcgggtc atgaacctgc cgcatacgca
     2461 ggttcatgac cagaaaagct ccgcggtcgg gcgccgggca gcagaaagcc ctcgtccagt
     2521 gatccgatgg acaagggctc tggcctgcgc ttttgcttct cgtgggccgg gatggattcg
     2581 aaccatcgta ggctgcgcca gcgattttac agaccgcctc ctttggccac tcggacaccg
     2641 acccgaggcc gcctagcata gcggcatgcc gagtttcgac gttgtgtccc aggtcgacat
     2701 gcaggaggtg cgcaacgcgc tcgaccagac gcaccgcgag atcgccaacc gcttcgactt
     2761 caaggggacc gagagcacca tcgacctctc gggcacggag atcacgctcc actccaattc
     2821 cgaacagcgc ctgaaggcgc tggtccaggt catggaggag aagttcgtcc gccgcaacgt
     2881 gccgctcaag gccctggcct acgggaagat ccaggaggcg gccaaggggg cggcccgcca
     2941 ggtggtgacg ctcaacgtcg ggatctccga cgagaaggcg cgggagatca acaagttcat
     3001 caaggccgag gccccgaagg gcgtgcagag ccaggtgcag ggcgaccagc tgcgggtgac
     3061 cgggaagaag aaggacgacc tgcaggcgac catcgccgcg ctgaagggcc acgatttcga
     3121 cgtgcccctc cagttcacga actttcgcga ttgatcagaa ctgcgccgcg ccctggcgca
     3181 tccgccgcag gcgggcgatg cgctcctcgg tcggggggtg ggtcgtgaac atcttggcga
     3241 agctcatctg ccggccggtc agcggattca cgatgtaggc ctgggcctgg gcggggttga
     3301 cgtccatggg gatcgccttg gcgccggcct cgatcttctc cagggcccgg gccagcggct
     3361 cgcccgtccc cagcaggagc gccccgctgc ggtcggcctc gaactcccgg gaccgggaca
     3421 gcgccatctg caacagcatg gccgccaccg gggcgagcag cgcgaaggcc agctcgccga
     3481 gcgggttgct ccgcttgcgc ccaccgccgc cgccgaacat cgctccgaac atcgccatgc
     3541 gggcgatgaa ggtgatggcc atggcgatgg ccgcggccac cgagccgatc aggatgtcgc
     3601 ggttgccgac gtgggacagc tcgtgggcca ggacgccctt gagctcgtct tccgacagca
     3661 tctgcgggat gccctgggtg caggccaccg aggcgtgctc ggggctgcgg ccggtggcga
     3721 aggcgttggg ctgcatcgac ggggtgacgt agagcctggg catcggcatg tcggcccggg
     3781 tcgtcagctc ggagacgatg cggtacagcg ccggcgcctc ggcctcggtc accgggacgg
     3841 cgcgggcggc cttgacggcg atcgtgtcgg agaaccagta cgacccgccg acgagggcca
     3901 gcccgagcag caggccgatc atcagcccgc cgctaccgcc ggcggcgcca ccgacgagga
     3961 tgaggaaccc gccgagggcg gcgaggaggg tgtacgtctt gatcgtgttc gtgctcacct
     4021 ggcatcacct acctgatcca acggtaccgg gggtggtctc gttccccgaa cgctccggga
     4081 tctcgccctc cagtttcgag gcgttggctg tgaacttgcc gggagcgggc tgcgagttgg
     4141 ttcagtcgta gtagccggag tggatgtaga tgcagggcac gccggcgtgg cggaacatct
     4201 cggcgttgcg ccggtcgtcc tcgaaggcca ggcgcaggtc gaagccccgg ttgcggagct
     4261 cggccacggc gtcctccttg aactcccggg cctgggcgta gtcgccgccc cggcgcatga
     4321 gcagggcgtc ccaccggatg ccgtaccggc cgagccaggc ctcggtcagg tggtggaccc
     4381 gggcgggccg gccggtcagc agcagcaccc gcagcgccgg gtcgagcagc tcgaggagga
     4441 tcttcacctc ctcgatgacc gggtcctcgc cgcaggcgtc gaagaagccc cgccagtccg
     4501 gccagggctc ctcgaggtag tgctgccggc gggcggcgtc ggagaggacc ccgtcgatgt
     4561 cgacgaccac cgccgccccg ggagcgaccg gaccggcccg ccacgtccag tgcggctcca
     4621 cggctagacc ctcttcccca ggatcgtgac ccggtgggcg ccgagccccg ccgggtcgag
     4681 gagggcgtcg gcctcgtgga cccggctgcg ggcggcgacg gcggccaggt cggtggcgct
     4741 ccggccgtgc caggcggccc gggcggcctc caccagttcg tcgacgccga gggaccggag
     4801 ccactggccc tgggtcgtct cgtcgaggac ggcgagaccg gcggcggccg ccgcccggtg
     4861 gagggcctcg accgggacgt cggcggtgat gtcctgggcg ccggggcggt cgaagggcga
     4921 gccactccgg tggtgggccc ggtaggtgcg cagccaaccg tcctggcccc gggcggcgag
     4981 gtcctcgacc ggggcggcgt agtcgacgac ggcgatgacc ccccgccgga gcatggccgc
     5041 cgccgaacgg atccactccg ccagcgcggt cgggagcggc aggcgggcgc cgacggggac
     5101 gtcgcggccg gccgccaggc gaccggcggc ggcggcgagc ggctcctcgg cggggaggac
     5161 cagcgggccg aagccgtcgg cgccggccgt gacccggacc tcgttccagc cgtcggcggt
     5221 gcgttcgacg atgcggaacg gaaggttgtc ggccagctcg ttggcgatca cgacggcgac
     5281 ggccgggccg gccgggagct ccccgagggc ggtgacgacc gggccggaac ccggcaccgc
     5341 caccggctcc tcgtcgggct cgggtggaac cgcgggcccg agggccagct ccgccggctc
     5401 cagcgagagg tgctcgccct gagccgcccg gaggcgggcc gaccgctcga cgagcacgta
     5461 gcggagggcc ggggcgcacc ggggcccggc ccgcaggacg tcgcgggcca gctgcccccg
     5521 cccggcgccg gcgtcgacca cgaggaacgg gtcggggcgc ccgaggccgt cccaccaacc
     5581 gtcgatcgcc cgggccacca gcgccccgaa cagcgacccg acctccacgg aggtgacgaa
     5641 gtccccttcg gcccgtccgg cgccgccacc cgtcccggcg aagaatccac cgtcggggtc
     5701 gtagagggcg gcctccatcc actcgtcgaa cggcagcggg ccccggcggt ggatgcgctc
     5761 cgccagccgg gcggccagat cggcgtcgcc cagcgtctac aggcccctgg tggccagttc
     5821 gcccaggcgg gcgaagaggt tgggatagac gccgatgacc agcaccaccg ccgccggcag
     5881 ggcgatggcc gcccccagcg cggcggggat ccggccgctg ccgggctcgg cgggagcggg
     5941 ccggaaccac atcaacgccg ccacccgggc gtagtagaag agcgccacca ccgagttgac
     6001 ggcggcgacg acgccgagcg tcaccgcctg agcggtgccg gcgtcgatca ccgccttgaa
     6061 gaccacgagc ttggcgtacc agccggccag cggcgggatg cccgccagcg agaacaggaa
     6121 cagcgacatc agcacggcca gggccggggc gtattcgaag aggccggcgt agctgtcgat
     6181 ctcggccgaa cgcgtctttc gggccacgcc gatgaggacg gcgaaggcgc cgaggttcat
     6241 ggccccgtag atcagcaggt agacgatggt ggccgagaag gcgccgggcc gggccgaccc
     6301 gtcgccctgg ttggccacgg caaagggcac gagcatgaag ccgccctggg cgatcgacga
     6361 gtaggccagc atacggacga ggttcgtctg ccgcagggcg atgaggttcc cgacggtcat
     6421 cgacgccgcc gccagcaccc acaggatcgg ctgccaggcg tcgccccggc cgaagaaccc
     6481 gacgtagacg aggctgagca gcgccacgaa gccccccgtc ttcgacgcca ccgacaggaa
     6541 cgccgtcacc ggcgtcggcg cgccctcgta gg
//
LOCUS       DATGJT010000676         3247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1229723, whole genome shotgun sequence.
ACCESSION   DATGJT010000676 DATGJT010000000
VERSION     DATGJT010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1229723"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1857
                     /locus_tag="VKX24_11690"
     CDS             <1..1857
                     /locus_tag="VKX24_11690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017557313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ09191.1"
                     /translation="RFAGEDILAMRPDALRRLRGDRMAMVFQEPMTSLNPAFTIGQQI
                     SLAVRAHRPCSKAEARAKAIEVLDHVGIPDAAKRVDDYPHAFSGGMRQRAMIAMALSC
                     NPRLLIADEPTTALDVTVQAQILDVLETAQEATGAAIVMITHDLGVIAGFADRIMVMY
                     AGRPVETGTVDDIFYRPRMPYTLGLLGSLPRLDRAERDPLTPVEGSPPSLVDLPPGCP
                     FAPRCPMRLSVCLELEPDLDPTRHPGHRAACHRHPEIEEQGLTPTDVFPAPVAGEPPV
                     ARRPRLERASVLEVEGLVRRFPLTRGSVIRRTVGTVHAVDGVSFDIREGETLGLVGES
                     GCGKTTTINEILSLARPQEGRIVVLGQETTKLDRGGRREIRRDVSVVFQDPMASLDPR
                     LPVGDVLGEPLRTHGVGKEQRLARVRELLRLVGLGPEHVSRYPAEFSGGQRQRICIAR
                     ALALEPKLIVLDEPVSALDVSIRAGVINLLEQLREKLNLSYLFVAHDLSVVRHIANRV
                     AVMYLGKIAEIGDVDEVFDNPAHPYTQALLSAIPLPDPRRERERRRIVLQGDLPSPAD
                     PPSGCRFRTRCPLHASLPPDKAQRCIDEEPVILSQGPDHGAACHYPQVKTVL"
     gene            1874..>3247
                     /locus_tag="VKX24_11695"
     CDS             1874..>3247
                     /locus_tag="VKX24_11695"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter family substrate-binding
                     protein"
                     /protein_id="HLJ09192.1"
                     /translation="MPATRRLARFVAALLPLLLALPACGGGGKKPSGESAAGRTGPSA
                     TAYDINAVARDKVPDGGTLHWPLDQIPPNLNYNEIDGTLRDTSDIVSAVLPSMFTFDA
                     ASVPSVNPHYATSAELTARDPKQVVTYKINPRATWSDGTPVTEADFEAQWKADSGANP
                     AYRISSANGYEQIESVARGADDREVVVTFKQPYADWKGLFSPLYPASTNNDPAVFNDG
                     WVGKIPVSAGPFKFESVDETAKTLTIVRDDKWWGDRAKLDRIIFRAIPGDAQIDALLN
                     GEIDFMDVGPDVNKLHRAEDAAGIKIRKAGGPQFRHITLNGASPILKDQKVRQALAMA
                     INRKTIAKTMLGPLGVDTKPLQNHIFMTNQRGYRDNAGVLSSADVDGAEKLLDEAGWK
                     VQGDVRRKDGKDLAIRFVIPSQVASSQQEATLVYNMLKAVNVKVDINAVPSDDFFKKY
                     VNTGDFDF"
BASE COUNT          521 a         1219 c         1081 g          426 t
ORIGIN      
        1 cgcttcgccg gcgaggacat cctcgccatg cgccccgacg cactccggcg gctccgcggc
       61 gaccggatgg cgatggtgtt ccaggagccg atgaccagcc tcaacccggc gttcaccatc
      121 ggccagcaga tctccctcgc cgtgcgcgcc caccggccgt gctcgaaggc cgaggcgcgg
      181 gccaaggcga tcgaggtcct cgaccacgtc gggatcccag acgcggccaa gcgcgtcgac
      241 gactacccgc atgcattctc gggtggcatg cgccagcggg ccatgatcgc catggcgctg
      301 tcgtgcaacc cgcggctgct catcgccgac gagccgacga cggcgctcga cgtcaccgtc
      361 caggcccaga tcctcgacgt gctcgagacg gcccaggagg cgaccggggc ggccatcgtg
      421 atgatcaccc acgacctcgg ggtgatcgcc ggcttcgccg accggatcat ggtcatgtac
      481 gccggccgtc cggtcgagac cggcacggtc gacgacatct tctaccggcc ccgcatgccc
      541 tacaccctcg ggctcctcgg ctcgctcccc cggctcgacc gggccgagcg ggacccgctg
      601 acgccggtcg agggcagccc accgtcgctg gtcgacctcc cgcccggctg ccccttcgcc
      661 ccccgctgcc cgatgcggct gtcggtctgc ctggagctcg agcccgacct cgaccccacc
      721 cgccatcccg gccaccgggc ggcctgccac cgccacccgg agatcgaaga gcaggggctc
      781 acccccaccg acgtgttccc ggccccggtg gccggcgagc cgccggtggc ccggcgcccc
      841 cgcctggagc gggcctccgt cctcgaggtc gaggggctcg tgcggcgttt cccgctgacc
      901 cgggggtcgg tgatccggcg gacagtgggg acggtccacg ccgtggacgg cgtgagcttc
      961 gacatccggg agggcgagac gctcggcctc gtcggcgagt cgggctgcgg caagacgacc
     1021 acgatcaacg agatcctgtc gctggcccgg ccgcaggagg ggcggatcgt cgtcctcggc
     1081 caggagacga cgaagctcga ccggggcggc cggcgggaga tccggcgcga cgtgtcggtc
     1141 gtcttccagg acccgatggc ctcgctcgat ccccggctgc cggtgggcga cgtcctcggc
     1201 gagccgctgc ggacccacgg cgtcggcaag gagcagcggt tggcccgggt gcgggagctc
     1261 ctccggctcg tcgggctcgg cccggagcac gtgagccgct acccggcgga gttctccggc
     1321 ggccagcggc agcggatctg catcgcccgg gcgctggccc tcgaaccgaa gctgatcgtg
     1381 ctcgacgagc ccgtctcggc cctcgacgtg tcgatccggg ccggcgtcat caacctgctc
     1441 gagcagctac gggagaagct caacctctcg tatctgttcg tggcccacga cctgtcggtg
     1501 gtgcgccaca tcgccaaccg ggtggcggtg atgtacctcg ggaagatcgc cgagatcggc
     1561 gacgtcgacg aggtcttcga caacccggcc cacccgtaca cccaggcatt gctgtcggcg
     1621 atcccgctgc ccgacccccg ccgggagcgg gagcggcgcc ggatcgtgct ccagggcgac
     1681 cttccgagcc cggccgaccc gccgtcgggc tgccgcttcc ggacgcgctg ccccctccac
     1741 gcctccctgc cgcccgacaa ggcccagcgc tgcatcgacg aggaacccgt catcctgagc
     1801 cagggcccgg accacggcgc cgcctgccac tacccgcagg tcaagacggt tctgtagaag
     1861 caggaggact cgattgccag ccacgcgacg cctcgcccgg ttcgtcgccg cgctcctgcc
     1921 cctgctgctg gcgctgccgg cctgcggcgg agggggcaag aagccgtcgg gcgagagcgc
     1981 cgccggccgg acgggcccgt cggcgacggc ctacgacatc aacgccgtcg cccgcgacaa
     2041 ggtccccgac ggcggcacgc tgcactggcc cctcgaccag atcccgccca atctcaacta
     2101 caacgagatc gacggcacgc tgcgcgacac cagcgacatc gtctccgccg tcctgccgtc
     2161 aatgttcacc ttcgacgccg cctcggtccc gagcgtcaac ccccactacg ccacctcggc
     2221 cgagctgacg gccagggacc cgaagcaggt cgtcacctac aagatcaacc ccagggcgac
     2281 gtggagcgac gggacgccgg tcaccgaggc cgacttcgag gcccagtgga aggccgacag
     2341 cggcgccaac cccgcctacc ggatctcgtc ggccaacggt tacgagcaga tcgagagcgt
     2401 cgcccggggc gccgacgacc gcgaggtcgt cgtgaccttc aagcagccgt acgccgactg
     2461 gaagggcctc ttctcgccgc tgtacccggc gtcgacgaac aacgaccccg cggtcttcaa
     2521 cgacggctgg gtcggcaaga tcccggtgtc ggccgggccg ttcaagttcg agagcgtcga
     2581 cgagacggcc aagacgctga ccatcgtccg ggacgacaag tggtggggcg accgggccaa
     2641 gctcgaccgg atcatcttcc gggcgatccc gggcgacgcc cagatcgacg ccctcctcaa
     2701 cggcgagatc gacttcatgg acgtcggccc cgacgtcaac aagctccacc gggcggagga
     2761 cgccgcgggc atcaagatcc gcaaggccgg agggccgcag ttccggcaca tcacgctgaa
     2821 cggcgccagc ccgatcctga aggaccagaa ggtgcgccag gcgctggcca tggccatcaa
     2881 ccgcaagacc attgccaaga cgatgctcgg gccgctcggc gtggacacca agccgttgca
     2941 gaaccacatc ttcatgacca accagcgggg ctaccgggac aacgccggcg tcctgtcgag
     3001 cgccgacgtc gacggggcgg agaagctgct cgacgaggcg ggctggaagg tgcagggcga
     3061 cgtccgccgc aaggacggga aggacctcgc catccggttc gtcatcccca gccaggtggc
     3121 gtcgtcgcag caggaggcga cgctggtcta caacatgctg aaggccgtca acgtcaaggt
     3181 cgacatcaac gccgtgccct cggacgactt cttcaagaag tacgtcaaca ccggcgactt
     3241 cgacttc
//
LOCUS       DATGJT010000677         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_502352, whole genome shotgun sequence.
ACCESSION   DATGJT010000677 DATGJT010000000
VERSION     DATGJT010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_502352"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..811
                     /locus_tag="VKX24_11700"
     CDS             <1..811
                     /locus_tag="VKX24_11700"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012853170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nitronate monooxygenase family protein"
                     /protein_id="HLJ09193.1"
                     /translation="GWRPASEAGRSREPFAEALTGEGALRLIEVALTHPVRLVANALG
                     APPEEMLEAAHGAGVPVAALAGKRQHAERHVRAGVDIVVAQGYEAGGHTGEIATMVLV
                     PEIVDAVAPLPVLAAGGIARGRQMAAAMALGAQGVWTGSVWLTTQEAETHPKVKEKFL
                     AATSSDTVRSRSITGKPARQLRSAWTDAWDGPGSPGPLPMPLQPLLVDYALHRIRRAA
                     AAGQAGAVQLVNYFVGQVVGSLDGVRPARQVLHEMVEEYVDTVAGLATGLQ"
     gene            complement(942..1763)
                     /locus_tag="VKX24_11705"
     CDS             complement(942..1763)
                     /locus_tag="VKX24_11705"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005451810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HLJ09194.1"
                     /translation="MTAALGTIGVWQFTGNMTPQLAAEAEALGYGAVWIGGSPDGDLR
                     QVEALLDATERITVATGIVNMWKDDAATVAASTQRVDGRHPGRFVLGVGVGHREAIAE
                     YRNPYDKIVEYLDQLDEAGVPAERRILAALGPKVLELSAARAAGAHPYLTTPEHTAFA
                     RKIVGPDTLLAPEHKVVLDTDAERARAIGRKTVKRYLGLVNYRSNLLRFGFSEDDVAG
                     EGSDRLIDALVLHGDAATVARGVRAHLEAGADHISIQVLGDDLVPAYRALAEALQ"
     gene            1904..>2214
                     /locus_tag="VKX24_11710"
     CDS             1904..>2214
                     /locus_tag="VKX24_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014134182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ09195.1"
                     /translation="MGSFKRIAPIFAVQDLDAALAHYQRLGFATRAYEGGGYGFAERD
                     GIEIHLGVVAAGDHRTNGAYLFVDDADDVAEKWRSAGAEVHGPEDTEWGQHEGAMVDP
                     RS"
BASE COUNT          279 a          784 c          861 g          290 t
ORIGIN      
        1 cggctggcga ccggccagcg aggccggcag gtcgcgggag ccgttcgccg aggcgctgac
       61 cggcgaaggc gccctgcggc tcatcgaggt ggcgctcacc catcccgtcc ggctggtggc
      121 caacgccctc ggcgccccgc cggaggagat gctcgaggcg gcccacggcg ccggggtccc
      181 cgtcgccgcc ctggccggga agcgccagca cgccgagcgg cacgtgcggg ccggcgtcga
      241 catcgtcgtg gcccagggct acgaggccgg cggccacacc ggcgagatcg ccaccatggt
      301 gctcgtcccc gagatcgtcg acgccgtggc gccgttgccg gtgctggcgg ccggcggcat
      361 cgcccggggg cggcagatgg cggcggccat ggcgctcggc gcccagggtg tgtggacggg
      421 gtcggtgtgg ctcaccaccc aggaggccga gacccacccg aaggtgaagg agaagttcct
      481 cgcggcgacg tcctccgaca cggtgcggtc ccggtcgatc accggcaagc ccgcccgcca
      541 gctgcgcagc gcctggaccg acgcctggga cgggcccggc tcgcccgggc cgctgcccat
      601 gccgctccag ccgctgctgg tcgactacgc cctccaccgc atccgccggg cggcggccgc
      661 cggccaggcg ggggccgtcc agctcgtcaa ctacttcgtc ggccaggtgg tcggctcgct
      721 cgacggcgtc cggccggccc ggcaggtcct gcacgagatg gtggaggagt acgtcgacac
      781 ggtggccggg ctggcgacgg gtctgcagtg atgcccgcac cggtcgagcc gaccgtatgc
      841 cgcgaccggc tgcgctccag ccgcgttcac ggccgtgaac gccccgggta ccgcgaccgg
      901 tcgcaccccc cggtgcgacg ggcgctccag cggtgccggt gttactgcag cgcttcggcc
      961 agcgcccggt aggcgggcac gaggtcgtcg ccgaggacct ggatggagat gtggtcggcg
     1021 ccggcctcga ggtgggcccg cacgccgcgg gcgacggtgg cggcgtcgcc gtggaggacg
     1081 agggcgtcga tgagccggtc gctgccctcg ccggccacgt cgtcctccga gaagccgaag
     1141 cggagcaggt tgctgcggta gttgaccagc ccgaggtagc gcttcaccgt cttccggccg
     1201 atggcccggg cgcgttccgc gtcggtgtcg aggacgacct tgtgctccgg ggcgagcagc
     1261 gtgtcggggc cgacgatctt gcgggcgaag gcggtgtgct ccggcgtcgt caggtagggg
     1321 tgggccccgg cggctcgggc ggcggagagc tccagcacct tcgggcccag tgcggcgagg
     1381 atgcgccgtt cggccggcac cccggcctcg tcgagctggt cgaggtactc gacgatcttg
     1441 tcgtaggggt tgcggtactc ggcgatggcc tcccgatggc cgacgccgac gccgagcacg
     1501 aaccggcccg gatgccggcc gtcgacccgt tgcgtggagg cggccacggt ggcggcgtcg
     1561 tccttccaca tgttgacgat cccggtggcc accgtgatcc gttccgtggc gtcgaggagc
     1621 gcctcgacct gtcggaggtc gccgtcgggc gacccgccga tccagacggc gccgtagccc
     1681 agcgcctccg cctccgccgc cagctgcgga gtcatgttgc cggtgaactg ccagacgccg
     1741 atggtgccga gtgccgcggt catgggccga cactacggca ccggagcgcc cgaatgggcg
     1801 tccggggtca gacggagacg tcgtcgacgg cgggcagcca ggcggcgagc tcggccagcg
     1861 gcacggggcg ggcccccggg cgggaacgtg ccaggcttac ggagtgggca gcttcaagcg
     1921 gatcgcgccg atcttcgccg tgcaggacct cgacgccgcc ctggcgcact atcagcggct
     1981 cggcttcgcc acccgggcct atgagggcgg aggctacggc ttcgccgagc gggacgggat
     2041 cgagatccat ctcggcgtcg tggcggccgg cgaccatcgg accaacggcg cgtacctgtt
     2101 cgtcgacgac gccgacgacg tggcggagaa gtggcgctcc gccggcgccg aggtccacgg
     2161 ccccgaggac accgagtggg gtcagcacga gggggccatg gtggatccca gatc
//
LOCUS       DATGJT010000678         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_820557, whole genome shotgun sequence.
ACCESSION   DATGJT010000678 DATGJT010000000
VERSION     DATGJT010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820557"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VKX24_11715"
     CDS             complement(<1..449)
                     /locus_tag="VKX24_11715"
                     /inference="COORDINATES: protein motif:HMM:NF013882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HLJ09196.1"
                     /translation="MTTSDRTLVDGPRAAAATIPLYCVNLPSSPDRKARMTRRFAELG
                     LLDRVRFVPAVERISPQVDQHLARAGIEWAPSRRRAEIACLLSHLKALAMFVEDTSAA
                     SAIVFEDDVLLHRDWHEQLAGVLDNLEEGVPLCSLGYEVVSWEGFDWA"
     gene            566..1381
                     /locus_tag="VKX24_11720"
     CDS             566..1381
                     /locus_tag="VKX24_11720"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HLJ09197.1"
                     /translation="MKTLTTRRQAREGRVDVGALLPGAKAMKAAQGRDEQVLVLSPHF
                     DDAVLSCGAWLSQHPGAIVATVCSGHPGPGVPPHEWDGTSGFPSGDAAATVRRGEDAA
                     ALEILGARQVGLGFLDGQYRQVTGRCHEESSVRGPFKDAVAEAFCGLVDALRPTLVLC
                     PMGLLHQDHIAIAEAAWSTLRARPRSNLIAYLDLPSALGDPAWLDEAEDRLRSSGLHA
                     AEFAFEPHRSELKERAVACYTSQLEQLGDVYADFSGIFDPGAERFVRILLEAA"
     gene            1387..>2030
                     /locus_tag="VKX24_11725"
     CDS             1387..>2030
                     /locus_tag="VKX24_11725"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLJ09198.1"
                     /translation="MSAPKSTIAVIPVYNSEKLLTDRITELLTSSFTKIVVCDDCSSD
                     DTAAAMAALAQERVVSILGEHNVGPAGNRNRVLALLEHEESDCLFFSDADCQVTYRGN
                     LGNVVDDGFEDPEVGVVGFGILKRDGSPMKWNYGSLMHPVHEAADQRLEHLLEKKLIA
                     KEQFVLGAPSRAASYRMLPEKGPKDVGWVAEGCFAIRTELFKELGGFDTAMRFH"
BASE COUNT          333 a          691 c          683 g          323 t
ORIGIN      
        1 gcccagtcga acccctccca ggacaccacc tcgtagccca gcgaacagag ggggaccccc
       61 tcttcgaggt tgtcgaggac cccggccagc tgctcgtgcc agtcgcgatg gaggaggacg
      121 tcgtcctcga agacgatggc cgaggccgcc gaggtgtcct ccacgaacat ggccagcgcc
      181 ttgaggtggc tcaagagaca ggcgatctcg gccctcctgc gactgggagc ccactcgatg
      241 ccggctcgcg ccaggtgctg gtcgacctgc ggagagatcc gttcgaccgc cggtacgaac
      301 cgaacccggt cgagcaggcc gagttcggcg aaccgacggg tcatgcgggc cttccggtcc
      361 ggtgaactcg ggaggttgac gcagtagagc gggatcgtgg ccgccgcggc cctcgggccg
      421 tcgacgaggg tgcgatccga cgtcgtcacg gcagcgcagc ctaccgatct gcgattgcct
      481 ggacctccgg cgctctccgt gtggtcacgg cgaaagtcca gatcagcatc agtatcatga
      541 ccgccgtggg gggctgcccg gtcaagtgaa gacgctcacg accaggcggc aagcgcgcga
      601 gggcagagtc gatgtcggcg cgctgctccc gggcgccaag gcgatgaagg cggcccaggg
      661 gcgagacgag caggttctcg tcctgtctcc gcacttcgat gacgccgtct tgagttgcgg
      721 ggcctggttg tcgcagcacc cgggggcgat cgtggccacc gtctgctccg ggcacccggg
      781 acccggtgtc cccccgcacg agtgggacgg aacctcgggg tttccctcgg gcgacgccgc
      841 ggccacggtg cgacgggggg aggatgccgc cgccctcgag atcctcggcg cgaggcaggt
      901 cggtctcggg ttccttgacg gccagtatcg ccaggtgacg ggccgctgtc acgaggagag
      961 ttccgtgcgc gggcccttca aggatgcggt cgccgaggcg ttctgcgggc tcgtcgacgc
     1021 tctgcggccg acgctcgttc tctgcccgat gggtctgctc caccaagatc acatcgccat
     1081 cgccgaggcg gcctggtcga cgcttcgcgc ccgaccgcga agcaatctga tcgcctatct
     1141 cgaccttccc tcggcgctcg gcgatccggc ctggctcgac gaggccgagg accggctccg
     1201 ctcgtcggga ctccacgcag ccgagttcgc tttcgagccg cacaggtccg agctgaagga
     1261 gcgggcggtc gcctgctaca cctcgcagct cgaacagctc ggcgacgtgt acgcggattt
     1321 ctccggcatc ttcgacccgg gcgctgaacg ttttgtccgg atcctcctgg aagcggcata
     1381 ggaagcatga gcgctccgaa gtccaccatc gcggtcatac cggtctacaa ctccgagaag
     1441 ctcctcaccg accggatcac cgagctcctg acgtcctcgt tcacaaagat cgtcgtctgc
     1501 gacgactgct cgtccgatga caccgcggcc gccatggccg ccttggccca ggaacgggtc
     1561 gtctccatcc tgggcgagca caacgtcggc cccgcgggca accgaaaccg cgtgctggcc
     1621 ctcctcgagc acgaggagag cgactgtctg ttcttctccg acgccgactg ccaggtcacg
     1681 taccggggga acctcggcaa cgtcgtcgac gacgggttcg aggaccccga agtgggcgtc
     1741 gtcgggttcg gcatcttgaa acgcgacggc agtcccatga agtggaacta cggaagcctc
     1801 atgcacccgg tgcacgaggc ggccgaccag cgcctcgagc acctgctgga gaagaagctg
     1861 atcgccaagg agcagttcgt gctcggggcc ccctcgagag ccgcctccta ccggatgctc
     1921 cccgagaagg gtccgaagga cgtcggctgg gtcgccgaag gctgcttcgc catacgcacc
     1981 gagttgttca aggagctcgg cggattcgac acggccatgc ggttccacga
//
LOCUS       DATGJT010000679         5976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1441947, whole genome shotgun sequence.
ACCESSION   DATGJT010000679 DATGJT010000000
VERSION     DATGJT010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5976
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1441947"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VKX24_11730"
     CDS             <1..243
                     /locus_tag="VKX24_11730"
                     /inference="COORDINATES: protein motif:HMM:NF014009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HLJ09199.1"
                     /translation="LAPPGIYYAHDDLTRRTQNIGDWEEPINGHSHIAHMLMGGASHT
                     IPVGAGRPLLGRWQRLLLVELDGPRPRELVLHVFGF"
     gene            314..1120
                     /gene="trpC"
                     /locus_tag="VKX24_11735"
     CDS             314..1120
                     /gene="trpC"
                     /locus_tag="VKX24_11735"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015247082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HLJ09200.1"
                     /translation="MQTYLDKILDRTRDRVATSQRRRTTGDLERELKYAPTVRDFAGA
                     ITAPGMSLIAEVKRRSPSKGRIRDELNPAQVAASYEAGGARALSVLTEPEFFAGTLDD
                     LVQAREATAIPVLRKDFVIDPYQVVEARVGGADAILLIVLALPDRGRFAELAAAAGEL
                     GMAALIEVHEERELDAAFAVADGRPSLIGVNQRDLTSFVVDRGLAIRLRPQIPPEVAM
                     VAESGIADRSDVVELEEAGIEAILVGEALMRADDPGAAAAALLGGPPPEG"
     gene            1146..2360
                     /gene="trpB"
                     /locus_tag="VKX24_11740"
                     /pseudo
     CDS             1146..2360
                     /gene="trpB"
                     /locus_tag="VKX24_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007072121.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
     gene            2397..3206
                     /gene="trpA"
                     /locus_tag="VKX24_11745"
     CDS             2397..3206
                     /gene="trpA"
                     /locus_tag="VKX24_11745"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HLJ09201.1"
                     /translation="MAPRPPAAPATELESRLLEARAGRKLFVPYLTAGLPSPQRFVDL
                     VAELSEQADAIEIGVPFSDPIMDGPVIQAASTRALAAGISIDRCLDLIRDARRYAKVP
                     LVAMTYYNPVHRRGTEEFVEAVRQAGVVGMIVPDLPFEESGDLRSALTPRGMALVQLI
                     APTTPLERAAMLARGSGGFVYAVSRLGVTGEQQALGTAALGVVVRIRPHTRLPILLGI
                     GISTGEQAAAGARIADGVIVGSAIMRPILGGKPEGAVALARDIRRALNGGG"
     gene            3214..3444
                     /locus_tag="VKX24_11750"
     CDS             3214..3444
                     /locus_tag="VKX24_11750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09202.1"
                     /translation="MAGWGDDPILEQLRGLIEAGWEVETIDEDYEGPDGPADRVVVRN
                     GGSGEPGVETREFVSDHLAFHRYVAGLQGETY"
     gene            3508..4572
                     /locus_tag="VKX24_11755"
     CDS             3508..4572
                     /locus_tag="VKX24_11755"
                     /inference="COORDINATES: protein motif:HMM:NF024734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin domain-containing protein"
                     /protein_id="HLJ09203.1"
                     /translation="MRAEKRTSDAKDQPEAIIARLAERQYGVFTGQQAFDAGLNQGQL
                     NRRVANGAWERVHRGVFRVAGSAPSPHQRLMIACLSAGPAAVVSHAAAAWLWGLPGGD
                     PSPQVTLPLPARSRNLQGVKVHATSFLPACDRTVRYRIPVTDPARLVVDMAAVLPRRE
                     LEILLDAVLSKELARDTRIGWRVAELAARGRQGLGPLRDMLHARSREGGVPASVLESL
                     ARLVLAGLPPHRFNKRVVADKERVVDVDFDGIPLFTEFDGWDGPKGAPRTHPLPTGHR
                     PAERPGHPRPDPAAVHLRRPGPTPRLGPGDCDRQRPPACPGEGRPAGPGGLGGRRPAG
                     PSVREEMPAGEEPECDAGGA"
     gene            complement(4513..4752)
                     /locus_tag="VKX24_11760"
     CDS             complement(4513..4752)
                     /locus_tag="VKX24_11760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6186 family protein"
                     /protein_id="HLJ09204.1"
                     /translation="MTLHGGRVLAVLVGSSQAVGLTFWVAITAAVLGLEVTARLTRSA
                     VPSLGDLVARYLPDPLLRAAGVALWLFAGWHLFSH"
     gene            complement(4749..5129)
                     /locus_tag="VKX24_11765"
     CDS             complement(4749..5129)
                     /locus_tag="VKX24_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09205.1"
                     /translation="MWASGWQRYTWGARIGTFACALVVLAAGVARPPPDRPPPDRPSP
                     DRQPGPRWRRGDLAWLAVIALAAAWDLLGLLTPPGRHHLTLSATELAERPFHAVLFAL
                     WLAVGWTLASAPLRTRRPRREEQR"
     gene            complement(5180..>5976)
                     /locus_tag="VKX24_11770"
     CDS             complement(5180..>5976)
                     /locus_tag="VKX24_11770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015244977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLJ09206.1"
                     /translation="EAAARHLTPVTLELGGKCPAIVDRDAALGVVARRLAYGKFLNAG
                     QTCVAPDYVLVHAEVEKPLVEHLAKAVTEFYGDDPKASRDYGRIVSDRHFERLAGLLA
                     AGGFAEVAAGGLDRADAATRYLPPTILTGVAAGAAVMGEEIFGPILPVLAVDDLDAAI
                     AFVNARPKPLALYVFTSHPPAARAVVERTSSGSACINTCVVQLAVPDLPFGGVGASGT
                     GAYHGRRGFETFSHRKAVLAKPALPEPPLQYPPYTGLRQRLLRKIY"
BASE COUNT          819 a         2161 c         2228 g          768 t
ORIGIN      
        1 ctggccccgc cgggcatcta ctacgcccac gatgacctca cccgccgcac ccagaacatc
       61 ggcgactggg aggagccgat caacggccac tcgcacatcg cccacatgct gatgggcggc
      121 gcctcgcaca ccatcccggt cggtgccggc cggccgctgc tcgggcgctg gcagcggctg
      181 ctgctcgtcg agctcgacgg cccccgcccg cgggagctgg tgctgcacgt cttcggcttc
      241 tgagccggcg ccacttcggc ttctgagccg cgccccccgg cccgggcggg tcgggtggta
      301 acgtcggcgg gcgatgcaga cctacctgga caagattctc gaccgcaccc gggatcgggt
      361 ggccacctcg cagcggcgcc gcaccaccgg cgacctcgag cgggaactca agtacgcccc
      421 caccgtgcgt gacttcgccg gggcgatcac cgcgccgggg atgtcgctga tcgccgaggt
      481 caagcgccgc tcaccgtcga agggccggat ccgggatgag ctgaacccgg cccaggtcgc
      541 cgcctcctac gaggcgggcg gcgcccgggc gctgtcggtg ctcaccgagc cggagttctt
      601 cgccgggacg ctggacgacc tggtccaggc ccgggaggcc accgccatcc cggtgctgcg
      661 caaggacttc gtcatcgacc cgtaccaggt cgtcgaggcc cgggtcggcg gggcggacgc
      721 catcctgctg atcgtcctgg cactgcccga ccggggacgg ttcgccgagc tggccgccgc
      781 cgccggcgag ctggggatgg ccgccctgat cgaggtccac gaggagcggg agctcgacgc
      841 cgccttcgcc gtggcggacg ggaggccgtc gctgatcggg gtgaaccagc gggatctgac
      901 gagcttcgtc gtcgaccgcg gcctcgccat ccggctgcgg ccacagatcc cgcccgaggt
      961 ggcgatggtc gccgagagcg ggatcgccga ccgctccgac gtcgtcgagc tcgaggaggc
     1021 cgggatcgag gcgatcctcg tcggcgaggc gctgatgcgg gcggacgatc ccggtgcggc
     1081 cgccgccgcc ctgctcggcg ggcccccgcc cgaaggttag ggcggagccg ggtagactcg
     1141 ggacggtgac ccctcaactc gctccaaccg atcccgcacc ctcccttccc gacgaacggg
     1201 gctggttcgg cgcctacggc ggtcgctacg ccccggaggt gctcatcggg gcgctggagg
     1261 agctcgacgc cgcccgccgc gaggcgatgg ccgacccggc cttccacgac gagttccact
     1321 cgctgctgaa ggaggtcgcc gggcgcccga ccgccctgta ccacgcccgc cggctgaccg
     1381 acgagatccg gggggccgac atctggctga agcgggagga caccgcgttc accggggcgc
     1441 acaagatcaa caacacactc ggccagatgc tgctcgcccg ccggatgggc aagcggcggg
     1501 tgatcgccga gaccggggcc ggccagcatg gcgtcgccac cgccaccgcg gcggcctggt
     1561 tcggcatccc ggcggtggtc tacatgggcg aggaggacac ccgccggcag gccctgaacg
     1621 tcgcccggat gaaactgctg ggggccgagg tgcgcccggt ggcggccggg tccaagaccc
     1681 tgaaggacgc catcaacgag gcgttccgcg actgggtgga gaacgtcgag accacccact
     1741 acatcatcgg ctcggtggtc gggccgcacc cgttcccgtc cctggtcgcc gacttccagc
     1801 aggtgatcgg cgacgaggcc aaggggtagt tcctacgggc gaccgacgcc ctccccgatg
     1861 cggtgatcgc ctgcgtcggg ggcggctcga atgccatcgg gatcttccgg gccttcctga
     1921 acgacgaggt gcggctctac ggggtcgagg cggccggtga gggcctgacc accccccgcc
     1981 acgccgcgac gctgtcccgg ggagatcccg gcgtcctcca cggcgcccgc tcctacgtgc
     2041 tgcaggacgc ctccgggcag gtccaggagg cccactcgat ttcggccggc ctggactacc
     2101 caggcgtcgg gccggagcac tcctggctga aggactccgg gcgggtccgc tacctggccg
     2161 ccgacgacaa cgaggcggtc gaggcggtgc gcctgctggc ccggaccgag gggatcctcg
     2221 ccgccctgga gtcggcccac gccctggccc gagccgccga cctggcccgg gagatgggtc
     2281 ggggccacaa catcctggtg aacctgtccg ggcggggcga caaggacgtc gaggtcctcg
     2341 cccgggtcct gcacctatga gcggttgcgc cgctccgccg gccgcctgac gccggcgtgg
     2401 ctccccgtcc ccccgccgcc ccggccacgg agctggagtc ccggctgctc gaagcccgcg
     2461 ccggccggaa gctgttcgtc ccgtacctga ccgccgggct gccgtcgccg cagcgcttcg
     2521 tcgacctcgt cgccgagctg tccgagcagg ccgacgccat cgagatcggc gtgccgttct
     2581 ccgacccgat catggacggg ccggtgatcc aggcggcctc gacccgggcg ctggccgccg
     2641 ggatctcgat cgaccgctgc ctcgacctga tccgcgacgc ccgccgctac gccaaggtcc
     2701 cgctggtcgc catgacctac tacaacccgg tccaccggcg gggcaccgag gagttcgtcg
     2761 aggcggtccg ccaggccggc gtcgtgggca tgatcgtgcc cgacctgccg ttcgaggaat
     2821 cgggcgacct gcgctcggcg ctcaccccgc ggggcatggc cctggtgcag ctgatcgccc
     2881 cgaccacccc gttggagcgg gcggcgatgc tcgcccgggg ctcgggcggg ttcgtctacg
     2941 cggtgtcccg gctgggcgtg accggcgagc agcaggcgct cggcaccgcc gcgctcgggg
     3001 tcgtggtccg gatccggccg cacacccggc tcccgatcct gctcggcatc ggcatctcca
     3061 ccggcgagca ggcggcggcc ggggcgcgca tcgccgacgg cgtgatcgtc ggcagcgcga
     3121 tcatgcggcc gatcctcggc ggcaagccgg agggagcggt ggcgctggcc cgggacatcc
     3181 gccgggcact caacggagga gggtgaggac ggaatggcgg ggtggggaga cgatccgatc
     3241 ctggagcagc tgcgcggcct gatcgaggcc gggtgggagg tcgagaccat cgacgaggac
     3301 tacgagggcc ccgacggccc ggccgaccgg gtcgtggtgc gcaacggggg gtccggggag
     3361 cccggtgtcg agacccggga gttcgtcagc gaccacctgg ccttccaccg ctacgtcgcc
     3421 ggcctgcagg gcgagaccta ctagattttt tcccggtttc ccctttcgcc gggctttttg
     3481 tcggtagctc tcggcattct ttggcatgtg agagctgaaa aacgcacttc agatgccaaa
     3541 gatcagccgg aagccatcat tgcacgcctc gccgagcgcc aatatggcgt cttcacgggg
     3601 cagcaggcct tcgatgccgg cttgaaccag ggccaattga atcgccgagt ggcaaacgga
     3661 gcgtgggagc gggtccaccg gggggtgttc cgggtggccg gctcggcgcc gagtccccac
     3721 cagcggctca tgatcgcctg tctctccgcc gggccagccg cagtggtgtc gcacgccgcc
     3781 gcggcctggc tctgggggct gccgggcggc gacccgtcgc cccaggtcac cctgccgctg
     3841 ccggcccgca gccgcaatct gcagggagtg aaggtgcacg cgacgtcgtt cctgcccgcc
     3901 tgcgatcgca ccgttcgcta ccggatcccg gtgaccgacc cggcccgcct cgtggtcgac
     3961 atggcggcgg tcctgccccg ccgggagctg gagatcctgc tcgacgccgt cctctcgaag
     4021 gaactggcca gggacaccag gatcggctgg cgggtggccg agctggccgc ccgcgggcgg
     4081 caggggctcg gcccactgcg tgacatgctc catgctcgaa gcagggaagg cggcgtgccg
     4141 gccagcgtgc tggagagcct ggcccgcctc gtgctagccg ggttgccgcc gcaccggttc
     4201 aacaagcggg tcgtggccga caaggagcgg gtggtcgacg tcgacttcga tggcatcccg
     4261 ctcttcacgg agttcgacgg ctgggacggc ccaaagggcg ccccgcggac gcatccgcta
     4321 ccaacaggac atcgaccggc agaacgccct ggtcacccga ggccggaccc cgctgcggtt
     4381 cacctacgcc gacctggtcc aacgccccgc ctgggtccgg gagactgtga tcgccaacgg
     4441 ccgccggctt gcccgggaga ggggcgaccc gcaggcccag gcggcctggg aggccgccga
     4501 cccgcgggtc cctcagtgcg agaagagatg ccagccggcg aagagccaga gtgcgacgcc
     4561 ggcggcgcgt aggagcgggt ccgggaggta gcgcgcgacc aggtcgccca gcgacgggac
     4621 cgcgctccgg gtcagccggg cggtgacctc gaggcccagc acggcggcgg tgatcgccac
     4681 ccagaaggtc agtccgaccg cctggctgga gccgacgagg accgccagca cgcggccgcc
     4741 gtggagggtc atcgctgctc ctcccggcga gggcgccggg tgcgcagcgg cgccgacgcc
     4801 agcgtccagc cgaccgccag ccacagggcg aacaggacgg cgtggaacgg ccgctcggcc
     4861 agctcggtgg cgctgagcgt caggtggtgc cggccgggcg gcgtcagaag gccgaggagg
     4921 tcccaggcgg cggccagggc gatcaccgcc agccaggcca ggtcgccccg gcgccagcgt
     4981 gggcccggct gccggtcggg ggacggccgg tcggggggcg gccggtcggg gggcggccgg
     5041 gccactccgg cggccagcac caccagggcg caggcgaagg tcccgatgcg ggcgccccag
     5101 gtgtagcgct gccagccgct ggcccacacc gagacggcca ggaccgcggc cgccccgagc
     5161 cagcgagcca gccgggtgct cagtagatct tccgcagcag ccgctgccgc aggccggtgt
     5221 agggcgggta ctgcagcggc ggctcgggga gggccggctt ggcgagcacc gccttgcggt
     5281 ggctgaacgt ctcgaagccg cggcggccgt ggtaggcgcc ggtgccgctg gcccccacgc
     5341 ctccgaacgg caggtccggc accgccagct gcacgacgca ggtgttgatg caggcgctgc
     5401 ccgacgaggt gcgctccacg acggcccggg cggcgggcgg gtgggaggtg aagacgtaca
     5461 gggcgagcgg cttcgggcgg gcgttgacga aggcgatcgc cgcgtcgagg tcgtccaccg
     5521 ccaggaccgg gaggatcggg ccgaagatct cctcgcccat gacggcggcg ccggccgcca
     5581 cgccggtcag gatcgtcggc ggcaggtagc gggtggcggc gtcggcgcgg tccaggccac
     5641 cggcggcgac ctcggcgaac ccaccggcgg cgagcagtcc ggccagccgc tcgaagtggc
     5701 ggtcgctgac gatgcgcccg tagtcccggc tcgccttggg gtcgtcgccg tagaactcgg
     5761 tgaccgcctt cgccaggtgc tcgaccagcg gcttctcgac ctccgcgtgg accagcacgt
     5821 agtccggggc gacgcaggtc tggccggcgt tcaggaactt gccgtaggcc agccgccggg
     5881 cgacaacgcc aagggcggcg tcccggtcga cgatcgccgg gcatttgccc ccgagctcga
     5941 gggtcaccgg ggtcaggtgc cgggcggcgg cctcca
//
LOCUS       DATGJT010000680         4152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_922178, whole genome shotgun sequence.
ACCESSION   DATGJT010000680 DATGJT010000000
VERSION     DATGJT010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4152
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922178"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VKX24_11775"
     CDS             complement(<1..515)
                     /locus_tag="VKX24_11775"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538946.1"
                     /note="catalyzes the phosphorylation and decarboxylation
                     of oxaloacetate to form phosphoenolpyruvate using GTP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase"
                     /protein_id="HLJ09207.1"
                     /translation="MTAASTNQALLDFVEKGRRLLQPEAVHWCDGSQEEYDRLCELLV
                     ANGTFERLSDARRPNSYIARSDPADTARVEDRTFICSEAEIDAGPTNNWRDPAEMRAT
                     LTGLFEGSMRGRTMYVVPFSMGPLGSPFAHIGIQLTDSPYVVVSMRIMTRMGAAVLET
                     LGDGPFVPCLHS"
     gene            657..893
                     /locus_tag="VKX24_11780"
     CDS             657..893
                     /locus_tag="VKX24_11780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008358330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HLJ09208.1"
                     /translation="MTVQAYVLIQTEVGKAAQVAAEVRKIDGVRSADDVTGPYDVIVN
                     AEADSVDELGKMVVSRVQLVEGITRTLTCPVVNL"
     gene            complement(890..2014)
                     /locus_tag="VKX24_11785"
     CDS             complement(890..2014)
                     /locus_tag="VKX24_11785"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007619102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase family protein"
                     /protein_id="HLJ09209.1"
                     /translation="MSPSPDRRLRVLLLFGGQSAEHDVSRTSAVAVARALDPTCYDVV
                     PVAITREGRWLLADRARAALETGQWPPAFEVDGAPVRLAEKRAGLGSSVVRLESGGSP
                     LGPVDVAFPLLHGPYGEDGTVQGLLELAGLPYVGSGVLGSAVGMDKVMMKRAFAACGL
                     PAARSVSLRDDGVTKAELDRCEDAFGYPCFVKPANLGSSVGVSKAADRAALEEAVDVA
                     LRFDEWILVEEAIAGREIEVAVLGDRPPEASLPGEIVPGAEFYTYEDKYLDDSAELRA
                     PAGLDADRTAEVRRLAVAAFEACRCEAMARVDFFLEDPGRGFLVNEVNTIPGFTPISM
                     YPRLWEVSGVPYPELLDRLIALALERHERRAARAGRARDA"
     gene            complement(2030..2302)
                     /locus_tag="VKX24_11790"
     CDS             complement(2030..2302)
                     /locus_tag="VKX24_11790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09210.1"
                     /translation="MPRLRGRWVFGCTVAAEVALLVQVATGATLVSSKRFTVPRFHMF
                     YGFVAFITIGIAYSSKDSMRGRLEMFYGIIGLFLMGVGIRAVLQVR"
     gene            complement(2424..2771)
                     /locus_tag="VKX24_11795"
     CDS             complement(2424..2771)
                     /locus_tag="VKX24_11795"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013133039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HLJ09211.1"
                     /translation="MSVVRINAITVPPERMEEFEKRFANRAGEVSKMPGFEEFQLLRP
                     SDGRDVCLVYTRWSSEEAFNDWVNSAAFQHGHKAHSTQGPVGTASELWSFDVIQQEGP
                     PGGTGGVPPTGAA"
     gene            complement(2768..3721)
                     /locus_tag="VKX24_11800"
     CDS             complement(2768..3721)
                     /locus_tag="VKX24_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007319260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HLJ09212.1"
                     /translation="MSAPHGEDGSARAIVAAFLANLGIALAKLVAFAVTGAASMLAEG
                     VHSIADTGNQGLLFIGGRRARKPATGAHPFGYGRERYFWSFVVAVVLFTAGGLFAVME
                     GVEKIRHPHELDSWPWAVGTLVVAFALETSSLRTAVRESREPKGDLRWPEFIRHAKVP
                     ELPVVLLEDTGALLGLAFALVGIGLAELTGNPRFDAVGSLAIGALLGCIAFVLAVETK
                     SLLIGEAAAPAVQAAICAALEGTPGVDRVIHLRTEHLGPDDLLVVAKIAVDGAMPLSE
                     TALVIDRAEAAVRAGVPQARLMFLEPDVDRRMPTRETGGRS"
     gene            complement(3804..>4152)
                     /locus_tag="VKX24_11805"
     CDS             complement(3804..>4152)
                     /locus_tag="VKX24_11805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09213.1"
                     /translation="GANFFGSTGGIKLNQPIIGIAPTNSNQGYWFVAADGGIFSFGDA
                     LSFTPKLGGAPVTAVTAAPDGKGLWVSRADGSVNAYGSAPDFGSLTVTPAQPIVGIAS
                     LNVTTSPAPAPAP"
BASE COUNT          635 a         1451 c         1526 g          540 t
ORIGIN      
        1 gagtggaggc aggggacgaa gggcccgtcg cccagcgtct cgagcacggc ggcgcccatc
       61 cgggtcatga tccgcatgct gacgacgacg tacggcgagt cggtcagctg gatcccgatg
      121 tgggcgaacg gcgaccccag cggacccatg gagaacggaa cgacgtacat cgtgcggccc
      181 cgcatcgacc cttcgaagag ccccgtcagc gtggcccgca tctcggccgg gtcccgccag
      241 ttgttggtgg gaccggcgtc gatctccgcc tcgctgcaga tgaacgtgcg gtcctcgacc
      301 cgggccgtgt cggcggggtc ggagcgggcg atgtagctgt tgggccgccg ggcgtcggac
      361 aggcgctcga acgtcccgtt ggccaccagc agctcgcaga gccggtcgta ctcctcttga
      421 ctgccatcgc accagtggac ggcttccggc tggaggagcc ggcggccctt ctcgacgaag
      481 tccagcagag cctggttggt cgacgccgca gtcatagtca tcctcaaatt cttccccacg
      541 ggaggccgat ggtcacgaac cggggcccac tttctgacaa ttcgtggccg gccggggcct
      601 tcaacccggc gcggcgcagg gaactaggat gcggcggttc cgctcgagga gggtgcatga
      661 ccgtccaggc gtacgtgctc atccagaccg aggtcggcaa ggcggcgcag gtcgcggccg
      721 aggtccgcaa gatcgacggc gtccggagcg ccgacgacgt gacgggcccc tacgacgtca
      781 tcgtcaacgc cgaggcggac agcgtcgacg agctcggcaa gatggtcgtc tcccgggtgc
      841 agctggtgga gggcatcacc cgcaccctca cctgcccggt cgtcaacctc taggcgtcgc
      901 gggcccgccc ggcccgggcg gcccggcgtt cgtggcgttc gagcgccagg gcgatgagcc
      961 ggtcgagcag ctcgggatag ggcacgccgc tgacctccca caggcggggg tacatcgaga
     1021 tcggcgtgaa ccccgggatc gtgttgacct cgttgacgag gaagccccgg cccggatcct
     1081 cgaggaagaa gtcgacccgg gccatggcct cgcagcggca ggcctcgaag gccgccaccg
     1141 ccagccggcg cacctcggcg gtgcggtcgg cgtcgagccc cgccggcgcc cgcagttcgg
     1201 cggagtcgtc gaggtacttg tcctcgtagg tgtagaactc ggcgccgggg acgatctcgc
     1261 ccggtagcga cgcctccggc ggccggtcgc caaggacggc gacctcgatc tcccgtccgg
     1321 cgatggcctc ctcgacgagg atccactcgt cgaagcggag ggccacgtcg accgcctcct
     1381 ccagcgccgc ccgatcggcg gccttggaca cgccgaccga ggagccgagg ttggccggct
     1441 tgacgaagca ggggtagccg aaggcgtcct cgcagcggtc gagctccgcc ttggtgacgc
     1501 cgtcgtcccg cagcgacacc gaccgggctg cgggaagccc gcaggcggcg aaggcccgct
     1561 tcatcatcac cttgtccatc cccaccgccg aaccgaggac gccggagccg acgtagggca
     1621 ggcccgcgag ctccagcagc ccctgaaccg tcccgtcctc gccgtagggc ccgtggagga
     1681 gcgggaaggc gacgtcgacg ggcccgaggg ggctgccgcc ggactccagg cgcacgacgg
     1741 aggacccgag cccggcccgc ttctcggcca ggcggacggg cgccccgtcg acctcgaagg
     1801 ccggaggcca ctggccggtc tccagcgccg cccgggcccg gtcggccagc agccagcgcc
     1861 cctcccgggt gatggccacc ggcacgacgt cgtagcacgt cgggtcgagg gcccgggcca
     1921 cggccacggc gctcgtccgg gacacgtcgt gctccgccga ctgcccgccg aagagcagca
     1981 ggacccggag gcggcggtcg ggggacgggc tcatgtcgcg cccatcgtgt cagcgcacct
     2041 ggagcacggc gcggatcccc acgcccatga ggaagagccc gatgatgccg tagaacatct
     2101 cgaggcggcc ccgcatcgaa tccttggagg agtaggcgat cccgatggtg atgaaggcca
     2161 cgaacccgta gaacatgtgg aaccggggca cggtgaagcg cttcgacgac accagcgtcg
     2221 ccccggtggc cacctggacc agcagggcga cctcggccgc cacggtgcag ccgaagaccc
     2281 accggccccg caggcgcggc acccgccagg cggccagggc gatcaggccg gccagggcgt
     2341 tgccgacgat ggcgatccag gcccagtcgg cgtggaagcg gtggagggcg ttgatcaggc
     2401 ggctccaaag ctattgcagc ggctcacgcc gcgcctgtcg gggggacacc ccccgtcccc
     2461 ccgggcgggc cctcctgctg gatgacgtcg aaggaccaca gctcgctggc cgtgcccacc
     2521 gggccctggg tcgaatgcgc cttgtggccg tgctggaagg cggcgctgtt gacccagtcg
     2581 ttgaaggcct cctccgagct ccaccgggtg tagacgaggc agacgtcgcg cccgtcgctc
     2641 gggcgcagca gctggaactc ctcgaagccg ggcatcttcg agacctcacc ggcccggttg
     2701 gcgaagcgct tctcgaactc ctccatccgc tccggcggga ccgtgatggc attgatgcgg
     2761 acgacgctca cgaacgacct cccgtttctc gggtcggcat cctacggtcg acgtcgggct
     2821 ccaggaacat caggcgggct tggggcacgc cggcccggac ggccgcctcg gcccggtcga
     2881 tgaccaacgc cgtctcggag aggggcatgg cgccgtcgac ggcgatcttg gccaccacga
     2941 ggaggtcgtc ggggccgagg tgctcggtgc ggaggtggat gacccggtcg acgcccggcg
     3001 tcccctccag ggcggcgcag atggcggcct gcaccgccgg agcggccgcc tcgccgatga
     3061 ggaggctctt ggtctcgacg gccagcacga aggcgatgca gcccagcagg gcgccgatgg
     3121 ccaggctgcc gacggcgtcg aaacgggggt tcccggtgag ctcggccaga ccgatgccga
     3181 cgagggcgaa ggcgaggccg agcagcgcgc cggtgtcctc gaggaggacg accggcagct
     3241 ccgggacctt ggcgtggcgg atgaactcgg gccaccggag gtcgcctttc ggctcccggc
     3301 tctcccgcac cgccgtccgc agcgaggagg tctcgagggc gaaggccacc accagcgtcc
     3361 ccaccgccca gggccacgag tccagctcgt ggggatggcg gatcttctcg acgccctcca
     3421 tgacggcgaa gaggccgccg gcggtgaaga ggaccacggc caccacgaag ctccagaagt
     3481 accgctcccg gccgtacccg aaggggtggg ccccggtggc gggcttgcgg gcccggcgtc
     3541 cgccgatgaa gaggagaccc tggttcccgg tgtcggcgat ggaatggaca ccctccgcca
     3601 gcatcgacgc cgccccggtc acggcgaagg ccaccaactt ggccagggcg atgccgaggt
     3661 tggccaggaa ggcggcgacg atggcccggg ccgatccgtc ctcgccgtgg ggggcgctca
     3721 ttccacccga cgatacaaaa caacggggag gcgcccgggc cggcgcctcc ccgtcgaaac
     3781 tgcggtggtg tgtggcggtg ggactacggg gccggcgccg gggccggcga ggtcgtcacg
     3841 ttgagggagg cgatgccgac gatgggctgg gcgggcgtca cggtgaggct gccgaagtcc
     3901 ggggcgctcc cgtaggcgtt gacgctgccg tcggcccggc tgacccacag gcccttgccg
     3961 tcgggggcgg cggtcacggc cgtcaccggc gccccgccga gcttcggcgt gaacgacagg
     4021 gcgtcgccga agctgaagat cccgccgtcg gccgccacga accagtagcc ctggttgctg
     4081 ttggtcgggg cgatcccgat gatcggctgg ttcagcttga tgccgccggt ggagccgaag
     4141 aagttggcgc cg
//
LOCUS       DATGJT010000681         3102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_502948, whole genome shotgun sequence.
ACCESSION   DATGJT010000681 DATGJT010000000
VERSION     DATGJT010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_502948"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1520)
                     /locus_tag="VKX24_11810"
     CDS             complement(<1..1520)
                     /locus_tag="VKX24_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018813015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09214.1"
                     /translation="MSDEIVPEVHPASDEPVAVVRPDQGEGGPAPAGGGEDGVTVRKR
                     RRRGSRGGRNRRRPSSAGPGSGDGAGDSDGDDDDEDSTGADRNGDDAVDLTEKTGAAP
                     ARSGRSREGGSRPAAPAAEGFPADGREPPSGPVEVSLPGRPGPATGARPVAASGGKPT
                     TPAPDTTTDPGGAGGEGADAGPALAAAADTAERPSSGRGRTAAAAAADSSDGGERPSS
                     GRGRTAAAAAADSADGGERPSGGRSRQGSGSSGGRGRAAAASASAALEISAPAADPAA
                     DAPTPSQAAGDGDGAAPGETSTRRRRGRGRGRTSTGAGGGAAAAAGGAPAGAVATGGS
                     TGATAPAPSRSRGRGGAAPAEKARQSEVEAMLDELDEAALERRKGRMRKGRPTGRYLM
                     CVSVRPGVATQVAVLEGRSLVEHYVSRPTDTTTQIDGNIYLGKVQNVLPGMEAAFVDI
                     GTPKNGVLYRDDVVFDETEIEGRRPKIERLLRNGQSVTVQVTKNPIGTKGARLTQEV"
     gene            complement(1922..>3102)
                     /gene="rodA"
                     /locus_tag="VKX24_11815"
     CDS             complement(1922..>3102)
                     /gene="rodA"
                     /locus_tag="VKX24_11815"
                     /inference="COORDINATES: protein motif:HMM:TIGR02210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HLJ09215.1"
                     /translation="RRSRRGARRLRRRAAGHDAVLIGSALALAALGVLLVGAATRRQG
                     DGFALRQLIWAVAGVGVLGTAAVVDLDRIRRAAGLVYLTGLAALLLVLSPLGATVNGA
                     QGWFRLGPVALQPAEVMKPAMVLALAAHGARARGPLEGRRLLGALVLLGAPVGLVLLQ
                     PDLGTAMVLVALAVGVVAVAGARARHLGLLAVLGILAVAGVLRAGVLAPYQVERLTGF
                     LHQSADPRGATWNLEQAKIAIGSGGLAGEGLFSGSQTRLAYVPEQHTDFVFTVVGEEL
                     GLVGGATVLALFALLAWRIWRAAWRAPEPFGALCCAGVLAMLVFQVTENVGMTMGITP
                     ITGIPLPFLSYGGSSMLTCFAGVGLAANVARDRRSALGRPWPRPLDWSQRDEHPLAAD
                     "
BASE COUNT          380 a         1239 c         1136 g          347 t
ORIGIN      
        1 acctcctggg tgagccgggc gcccttggtg ccgatcgggt tcttcgtcac ctgcacggtg
       61 accgactggc cgttgcgcag cagccgctcg atcttcggcc ggcgtccttc gatctcggtc
      121 tcgtcgaaga cgacgtcgtc ccggtagagg acgccgttct tcggcgtgcc gatgtcgacg
      181 aaggccgcct ccatgccggg caggacgttc tggaccttgc cgaggtagat gttcccgtcg
      241 atctgggtcg tggtgtcggt gggccgggag acgtagtgct ccaccaggct ccggccctcg
      301 aggacggcga cctgcgtcgc cacccccggc cggaccgaga cgcacatcag gtaccggccg
      361 gtcgggcgac ccttgcgcat gcggcccttg cgccgctcga gggccgcctc gtcgagctcg
      421 tcgagcatgg cttcgacctc ggactggcgg gccttctccg ccggcgccgc cccaccccgg
      481 ccccgggacc ggctcggcgc cggtgccgtg gccccggtgg agccaccggt agccaccgcc
      541 cctgccggcg cgccgcccgc ggcagccgcc gctcctcccc cggcgccggt ggaggtccgg
      601 ccccggcccc ggcctcggcg gcggcgggtc gacgtctcac ccggggcggc gccgtctccg
      661 tcgccggccg cctgggaggg ggtgggggcg tccgcggccg gatcggcggc gggcgcagag
      721 atctcgagtg cggcggacgc cgaggcggcg gcggcccggc cccgtccgcc ggacgagccg
      781 gatccctggc gggagcgtcc gccggacggg cgctcgccgc cgtcggcgct gtcggcggcc
      841 gcagccgccg cagtccggcc ccgcccgctc gacgggcgct caccaccgtc agagctgtca
      901 gcggccgcag ccgccgcagt ccggccccgc ccgctcgacg ggcgctcggc ggtatcggcc
      961 gcggctgcca gagcgggccc ggcatcggcg ccctcgccac cggcgccacc gggatcggtc
     1021 gtcgtgtccg gtgcgggcgt cgtcggcttc ccgcccgacg ccgccaccgg tcgggcgccc
     1081 gtggccggcc ccggacggcc ggggagcgac acttccaccg gacccgatgg cggttcccgg
     1141 ccgtcggccg ggaacccttc ggccgccggc gccgccggcc gcgacccacc ctcccggctg
     1201 cggcccgacc gtgccggagc cgcgccggtc ttctcggtca ggtcgacggc gtcgtcaccg
     1261 ttccggtcag cgccggtgga atcctcgtcg tcgtcgtcgc cgtcggagtc gccggcgcca
     1321 tcacccgatc ccgggccggc cgatgacggg cgccgccggt tgcggccacc ccgcgatccg
     1381 cgacgccgcc gcttgcggac agtgacacca tcctcgccgc cccccgccgg ggccggccct
     1441 ccctcgcctt gatccggccg caccacggca accggctcgt cggaggccgg gtggacctcc
     1501 ggaacgatct cgtcggacat ggaacccttt cctcgtgtcg cgcgccgggg cggcgcgccg
     1561 gcgcccgccg gccgacgcag tggtcggcgc ggggcgcgga gtcgaatggt cacgggcgcc
     1621 gccggcgccc tgatcgatct ggtcaaactt ggggacgtga cgagcccggg acgccgtcgc
     1681 ccgggtccac ccccacaccg ccagggcccg cagccaaccg gccaccaggg ccagggccag
     1741 gaccgccccg gcggccgtca cggacgatcg cccagttggg gatatcacag cgcgatcagc
     1801 aggaactcct ggccgggcgg gccgccgaac cgtcagcggg gaagggcggg cagcatggct
     1861 tccgctgcca cgacccgtcc cggcgaaccg ggcgggctcg agcacctcgg ccagcagcgg
     1921 ttcagtccgc ggccagaggg tgttcatcac gttgcgacca gtctagcggc cggggccagg
     1981 ggcgccccag tgccgaccgg cgatcccggg cgacattggc cgccaacccg acgccggcga
     2041 agcaggtgag catcgaggaa ccgccgtagc tgaggaacgg cagcgggatt ccggtgatcg
     2101 gtgtgatccc catggtcatc ccgacgttct cggtcacctg gaacacgagc atggcgagga
     2161 cgccggcgca gcacagggcg ccgaagggct cgggggcccg ccatgccgcc cgccagatcc
     2221 tccaggccag cagggcgaac agcgccagca ccgtggcgcc gccgacgagc ccgagctcct
     2281 cccccaccac ggtgaagacg aagtcggtgt gctgctcggg cacgtaggcc agccgggtct
     2341 gagagccgga gaacaggccc tcgccggcga gaccgcccga cccgatggcg atcttggcct
     2401 gctcgaggtt ccaggtggcg cctcgggggt cggccgactg gtgcaggaag ccggtcagcc
     2461 gctcgacctg gtacggggcc aggacgccgg cccgcagcac tccggccacg gccaggatcc
     2521 cgagcaccgc cagcagcccc aggtggcggg cccgggcgcc ggccacggcc accacgccca
     2581 cggccagcgc gacgaggacc atggccgtcc ccaggtcggg ttgcagcagg acgagcccca
     2641 ccggcgcccc cagcagcacc agggcgccga ggagccgccg cccctccagc gggccgcggg
     2701 cccgggcgcc gtgcgccgcc agcgccagga ccatggccgg cttcatcacc tccgccggct
     2761 ggagcgccac cggccccagc ctgaaccacc cctgggcgcc gttgacggtg gccccgagcg
     2821 ggctcagcac gaggagcagc gccgctagtc cggtgaggta gacgaggccg gccgcccgcc
     2881 ggatccggtc gagatcgacc accgccgccg tccccagcac gccgacgccc gccaccgccc
     2941 agatcagctg gcggagggcg aacccgtccc cctgccggcg cgtcgcggcc ccgaccagca
     3001 ggacgccgag cgccgccagc gccagcgcac tgccgatgag gacggcgtcg tgccccgccg
     3061 cccggcgccg gaggcggcgg gccccacggc gggatcgtcg ca
//
LOCUS       DATGJT010000682         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_406859, whole genome shotgun sequence.
ACCESSION   DATGJT010000682 DATGJT010000000
VERSION     DATGJT010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406859"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..990)
                     /gene="hemC"
                     /locus_tag="VKX24_11820"
     CDS             complement(13..990)
                     /gene="hemC"
                     /locus_tag="VKX24_11820"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008739417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HLJ09216.1"
                     /translation="MPERGAGANPGAGWPADRPLRLATRGSPLARRQTDMVVHRLAQA
                     HPGLRTEAVVIRTEGDRRPEVPLERIGGQGVFVKEIQQAVLDGAADVAVHSAKDLPPA
                     TPDGLVLAAVPERGDPRDALVGATLSGLAPGARVATGAARRRVQLANLRPDLTFVPAR
                     GNIATRVAKAGNGADAVVVAAVALDRLSIAGQAAEVLSPLVILPQVGQGAIALECRAD
                     DDAVAALLAAADDRDAHRAVLAERAMLRALGASCALPVAGWAEPDGDDLVLRGLLASG
                     DGRVVLHAERRGEDPEALGAEVARALWSELGGSELGGHQLAAAAPGAGR"
     gene            complement(994..>2074)
                     /gene="hemA"
                     /locus_tag="VKX24_11825"
     CDS             complement(994..>2074)
                     /gene="hemA"
                     /locus_tag="VKX24_11825"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HLJ09217.1"
                     /translation="VYQLQALFAKRAGIATDEVEAWCTVRFDDDVATHLFAVAAGLES
                     AVMGESEVLGQVRRAWEASHERHRSGPVLAGLFREAVRVGRRARHETAIARGATSFAH
                     AAVAMAARHLDDGLAGRTVTLLGAGDVGAGLLQALVALPPSERPARVLVASRTAARAR
                     ALVQAVEPDSGVSTVELASAAGALRESDVAFSALDVAAPFVSADDLAPRGGRSGHPIL
                     VVDLGVPRNVEQAAADVAGVRVVGMEELKDAVAQVGAERRAEVDAVMTIVEEELDRYR
                     AAVRGRGAAPVIAALRARLEAVRSAEMERQRAALGEEEWRRADEASQAALAKLLHRPT
                     VLLKETAGTPRGERLVEALRALFDL"
BASE COUNT          227 a          822 c          816 g          209 t
ORIGIN      
        1 cgaggtagac ggtcaccggc ccgcgccggg ggcggcggcc gccagctggt ggccgcccag
       61 ctcggacccg ccgagctcgc tccacagcgc ccgggccacc tcggccccga gggcctcggg
      121 gtcctctccc cggcgctcgg cgtggaggac cacccgcccg tccccgctcg ccaagagccc
      181 gcgcagcacg aggtcgtcgc cgtcgggctc ggcccagccg gcgacgggca gcgcgcagga
      241 cgccccgagc gcccgcagca tggcccgctc ggcgagcacc gcccggtggg cgtcgcggtc
      301 gtcggccgcc gccaagaggg cggcgaccgc gtcgtcgtcg gcccggcact cgagcgcgat
      361 cgcgccctgg ccgacctggg ggaggatcac gagcggggag aggacctccg ccgcctgccc
      421 ggcgatgctc aggcggtcga gggcgaccgc cgccacgacg acggcgtcgg ccccgttgcc
      481 cgccttggcc acccgggtgg cgatgttccc ccgggccggg acgaaggtca ggtccggccg
      541 caggttggcc agctggaccc gtcgccgggc ggccccggtc gccaccctcg ccccgggagc
      601 cagcccggag agcgtggcgc cgacgagggc gtcgcggggg tcgccccgct cggggacggc
      661 cgccaggacg aggccgtccg gggtggccgg ggggaggtcc ttcgccgagt gcacggcgac
      721 gtcggccgcc ccgtcgagca ccgcctgctg gatctccttc acgaagacgc cctggccgcc
      781 gatccgctcg agcggcacct cggggcggcg gtcgccctcg gtccggatga cgaccgcctc
      841 ggtgcgcagg cccgggtggg cctgggccag gcggtgcacg accatgtcgg tctgccgccg
      901 ggcgagcggc gagccccggg tggccagccg gagcggccgg tcagccggcc agccggcccc
      961 cgggttggct ccggcgcccc gctccggcac ggctcagagg tcgaagaggg cgcgcagggc
     1021 ctcgaccagg cgctcgccgc gcggggtgcc ggcggtctcc ttcaagagga cggtcgggcg
     1081 gtgcaggagc ttggccaggg cggcctggct cgcctcgtcc gcccgcctcc actcctcctc
     1141 gcccagcgcg gcccgctggc gctccatctc ggccgagcgg accgcctcga gcctggcccg
     1201 gagggcggcg atgaccggcg ccgcgccccg gccgcgcacc gcggcgcggt agcggtcgag
     1261 ctcctcctcg acgatggtca tcaccgcgtc gacctcggcc cggcgctcgg cgccgacctg
     1321 ggccaccgcg tccttcagct cctccatccc gaccacgcgc accccggcga cgtcggccgc
     1381 ggcctgctcg acgttgcggg ggacgccgag gtcgacgacg aggatggggt ggccggaccg
     1441 gccgccccgg ggcgcgaggt cgtcggccga cacgaagggg gcggccacgt cgagcgcgct
     1501 gaaggcgacg tcgctctccc gcagggcgcc cgcggccgag gccagctcga ccgtcgagac
     1561 cccgctgtcc ggctcgaccg cctggacgag cgcgcgggcc cgcgccgcgg tgcggctggc
     1621 gacgaggacg cgggccgggc gctccgaggg cgggagcgcg accagcgcct ggagcaggcc
     1681 ggcgccgacg tcgcctgcgc cgagcagggt caccgtgcgg ccggcgaggc cgtcgtcgag
     1741 gtggcgggcg gccatcgcca ccgcggcgtg ggcgaacgag gtggcgccgc gggcgatcgc
     1801 ggtctcgtgc cgggcccggc ggcccacccg caccgcctcc cggaagagac cggccagcac
     1861 cgggcccgac cggtgccgct cgtgggaggc ctcccaggcg cggcggacct ggccgagcac
     1921 ctcggactcg cccatgaccg cggactcgag tccggcggcc acggcgaaga ggtgggtggc
     1981 gacgtcgtcg tcgaagcgca ccgtgcacca cgcctcgacc tcgtcggtcg cgatccccgc
     2041 ccgcttggcg aagagcgcct gcagctggta cacg
//
LOCUS       DATGJT010000683         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_922491, whole genome shotgun sequence.
ACCESSION   DATGJT010000683 DATGJT010000000
VERSION     DATGJT010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922491"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VKX24_11830"
     CDS             <1..377
                     /locus_tag="VKX24_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018762078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ09218.1"
                     /translation="RVLLGFRVPCIVASPLSRGADPARPRVDHRLYDHTSILKLIEWR
                     WRLRPLGQRDASNRRADPGNLAAVLHFGRSDPSVPGAIPYPQPPPPGACRTNGSGGAF
                     EADDTWTPVLEAAARAGFELPA"
     gene            complement(487..1230)
                     /locus_tag="VKX24_11835"
     CDS             complement(487..1230)
                     /locus_tag="VKX24_11835"
                     /inference="COORDINATES: protein motif:HMM:TIGR01076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class E sortase"
                     /protein_id="HLJ09219.1"
                     /translation="MPAVTALPKRILRALQRLVPHPGDQMLVLGVLTAILLAAGGTVV
                     IVRSAPSAAAGTEQAFDVPSMTVAPSPTTTSTTLPPTTTTTAPAPVAPTALPASAHKV
                     NLGGDVHPIVPATQIGRIVIPKINLDHPIFEGVDETVIHWGPGHWPGSAMPGKVGNSV
                     FAGHRVTHTRPFYDIDLLNPGDDIIVHTADGTFTYKVTGHQIVTPKDTWIVNPTATAT
                     ITIFACHPKHSAAQRYVVRGDLVASAPPS"
     gene            1410..>2092
                     /locus_tag="VKX24_11840"
     CDS             1410..>2092
                     /locus_tag="VKX24_11840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09220.1"
                     /translation="MRHQGVLASAIVVVLLSGIASAAAMSGTFSAKATAPLTVSALAG
                     PGSTTTAAGGRVGHGSSSKTSSHGSPAQPGPAGSVAVGVGTGAGGPGAATGSGGGAAD
                     PTAGRSGGGATGASANGGAAVTGTVSVSGPTTSTVPAPGSAAPPAGSAGASFSASALA
                     VPGLGDLLKTVPAAQIPGISTLLNSLPAGGLNLIGQLLTAVPAGNLPLVGNLLQTVTS
                     GDVGPVASVL"
BASE COUNT          242 a          765 c          795 g          290 t
ORIGIN      
        1 gacgggtgct gctcggcttc cgggtgccgt gcatcgtggc gtcgccgctg tcccggggag
       61 ccgaccccgc ccggccccgg gtcgaccacc gcctctacga ccacacctcg atcctgaagc
      121 tgatcgaatg gcgctggcgg ctccgcccgc tggggcagcg cgacgcctcg aaccggaggg
      181 ccgatcccgg caacctggcc gccgtcctcc acttcgggcg cagcgatccg tcggtcccgg
      241 gggcgatccc ctacccgcag ccgccgccgc ccggcgcctg ccgcaccaat gggtccggcg
      301 gcgcgttcga ggccgacgac acgtggacgc ccgtcctcga agccgccgcc cgggcgggct
      361 tcgagctccc ggcgtagggc cgccgccgag cgggccgtcc gcccggggtt ttggagcgtg
      421 tgacgcaccg tcagggtgcg ccacgccctc caaaaagtgt cggacgggag cgccgggtcc
      481 cgcggctcag gacggcgggg cggaggcgac gaggtcgccc cgcaccacgt agcgctgggc
      541 ggcgctgtgc ttcgggtggc aggcgaagat cgtgatcgtg gccgtggcgg tcgggttcac
      601 gatccacgtg tccttggggg tcacgatctg gtggccggtc accttgtagg tgaacgtccc
      661 gtcggcggtg tggacgatga tgtcgtcgcc cgggttgagc aggtcgatgt cgtagaacgg
      721 gcgggtgtgg gtcacccggt gcccggcgaa gacgctgttg ccgaccttgc ccggcatggc
      781 cgaccccggc cagtggcccg gcccccagtg gatcaccgtc tcgtcgacgc cctcgaagat
      841 cggatggtcc agattgatct tcgggatcac gatccgcccg atctgggtgg ccgggacgat
      901 cgggtggacg tcgccgccga ggttcacctt gtgggcgctg gccggcaggg ccgtgggcgc
      961 caccggcgcc ggtgcggtcg tcgtggtcgt cggcggcagt gtggtggacg tcgtcgtcgg
     1021 gctcggggcc acggtcatgc tcgggacgtc gaaggcctgc tccgtccccg ccgccgccga
     1081 cggcgccgac cggacgatga cgacggtgcc gccggccgcc agcaggatgg cggtcagcac
     1141 gccgaggacc agcatctggt cccccgggtg gggaacgagg cgctggaggg cgcggaggat
     1201 tcgcttcggg agggcggtga cggcgggcat cgatccagtt gattcgacct cgggccgggc
     1261 gatcctgggc ccgcgatcac ccccagtcga ccgcaacccg gcaatcgtcg ccgcccggca
     1321 tcagcgttgg accggcggcc gccgatgggt cgagaggagg ggctccgtca atcgtcgacg
     1381 ccccaacgcc gaaggaggcg cgggccggta tgcgacacca gggagtgctg gcctcggcca
     1441 tcgtcgtcgt gctgctgagc ggcatcgcct cggctgcggc catgagcggc acgttctcgg
     1501 ccaaggcgac ggcgccgctg acggtctcgg cgctcgccgg cccgggttcg accaccaccg
     1561 ccgccggcgg acgggtgggt cacggctcct cctcgaagac gtcctcgcac ggctcgccgg
     1621 cccagccggg cccggccggc agcgtcgccg tcggcgtcgg gaccggcgcc ggcgggccgg
     1681 gggccgcgac cggttcgggc ggcggcgccg ccgatccgac ggcaggccgg tccggcggag
     1741 gggccaccgg cgccagcgcc aacggcgggg cggccgtgac cggcacggtc tccgtctcgg
     1801 gacccaccac gtccacggtg cccgctccgg gctcggcggc gccgcccgcc ggctccgccg
     1861 gcgcctcgtt cagcgcctcg gcgctggccg tccccggcct tggcgacctg ctgaagacgg
     1921 tgccggcggc ccagatcccc ggcatctcga ccctgttgaa ctcgttgccg gcgggaggcc
     1981 tgaacctcat cggccagctg ctcaccgccg tcccggccgg gaacctgccc ctcgtcggca
     2041 atctgctcca gaccgtgacg tcgggcgacg tcggcccggt ggcgtccgtg ct
//
LOCUS       DATGJT010000684         3918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1541689, whole genome shotgun sequence.
ACCESSION   DATGJT010000684 DATGJT010000000
VERSION     DATGJT010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1541689"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..896
                     /locus_tag="VKX24_11845"
     CDS             51..896
                     /locus_tag="VKX24_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015614840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09221.1"
                     /translation="MTTALRRPANLEPRPDAVDRPAEAGRSAPRIPAGLSKVPEVTAV
                     FWVAKVLSTGMGETTSDFLVHRFSPYVAVALGAIGLALALMLQARARRYVAWVYWLAV
                     VMVSIFGTMAADILHVGFGIPYIVSTAFYAVVLAGVFIAWQRSEKTLSIHSITTVRRE
                     MFYWTTVCATFALGTATGDLTARTLALGYLTSGVLFAAVMLIPAIGFRYFRLNGIFAF
                     WFAYVVTRPLGASFADWIGVSHARGGLAVGTGLVSVVLAGAIAILVGYLAVTKCDIRP
                     ANDAR"
     gene            1124..1969
                     /locus_tag="VKX24_11850"
     CDS             1124..1969
                     /locus_tag="VKX24_11850"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ09222.1"
                     /translation="MAAPIALAPAGSPCGFRAGSPVRYAHVVWIWMENRTYGDVVGNA
                     AAPYETSLAARCGTDRDYHQVGSPSLPNYLGATSGQTYGIADDADPAAHPITADNLFR
                     QVRTAGGTERSYVENMPTNCAGAPQGTYAVKHNPATYYDGGGDHAACLADDVPLGSTT
                     TGPLTADLDRGRLPSFALVVPDLCDDGHDCPAATGDRWLAGWLPHILYSSAYRSGNTA
                     VFVVWDEPTPMPNIVISPTTPPGLVSSVAVNHYALLRTTEELLGLPLLGEAVTSPTLR
                     PLFRL"
     gene            complement(1991..2656)
                     /locus_tag="VKX24_11855"
     CDS             complement(1991..2656)
                     /locus_tag="VKX24_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018504299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ09223.1"
                     /translation="MRLLVVEDEPKMAGLLRRVLAEQGHAVDNVDNGDDALWMATECD
                     YDAIVLDVMIPAPDGFEVCRRLRDRGRWAPILLLTARDGVNDRVDGLDAGADDYLAKP
                     FSFDELSARLRSLVRRRTNERPAALVVGDLTLDPASRQVTRCGTAVKLSPKGFSLLEL
                     FMRHPGEVLSRSALLQAWDFAYDGDSNVVDVYVRYLRDHIDRPFGRDSIETIWGAGYR
                     LNP"
     gene            complement(2869..3543)
                     /locus_tag="VKX24_11860"
     CDS             complement(2869..3543)
                     /locus_tag="VKX24_11860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011604381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HLJ09224.1"
                     /translation="MNPQHLLTTFGTAGLLAVVFAETGLLVGFFLPGDSLLVLAGLFC
                     AVGRKAPVHLDLPIVLLGLFGAAVAGAQTGYFIGRHVGPALLRRPDSRLFKRQHVDRA
                     QRYFDQYGPKTIVVARFIPVVRTFANPIAGIARMEVRTFALYNTVGALLWAGGVTMLG
                     FVLGKTIPSAQDHLTLIEAAIVAASIIPLGVEYMHSRRRHRTPKAREAAPDEIPSGLA
                     AGGRRP"
BASE COUNT          616 a         1382 c         1277 g          643 t
ORIGIN      
        1 cgccgcgccc cttcatcggc gactcaccgc tgcgcaccga gagtgttcgc atgaccaccg
       61 ctcttcgtcg gcccgccaac ctcgagccgc gcccggacgc cgtcgatcgc cccgccgagg
      121 ccggccgctc agcgcctcgg atcccggcgg gtctcagcaa ggttcccgag gtgaccgccg
      181 tgttctgggt cgccaaggta ctgagcacgg ggatgggcga gacgacctcc gacttcctcg
      241 tccaccggtt cagcccctat gttgcggtcg ctctcggcgc catcggcctc gcattggccc
      301 tgatgctgca ggcccgggcc cgccggtacg tggcctgggt ctactggctg gccgtggtga
      361 tggtgagcat cttcgggacc atggccgctg acattcttca cgtcggtttc ggcatcccct
      421 acatcgtgtc cacggctttc tacgcggtcg tcctcgccgg cgtgttcatc gcctggcagc
      481 gcagcgagaa gaccctgtcg atccacagca tcacgacggt ccgcagggag atgttctact
      541 ggacgaccgt ctgcgcgacg ttcgccctcg ggaccgccac cggagacctc accgcccgta
      601 ccctcgccct cgggtatctc acctcgggag tgctgttcgc cgcggtgatg ctgatccccg
      661 ccatcggctt tcgctatttc cggctcaacg ggatcttcgc cttctggttc gcctacgtgg
      721 tgacccggcc gctcggtgcc tccttcgccg actggatcgg cgtgtcgcac gctcgaggcg
      781 ggctcgccgt cggcaccggc ctcgtcagcg tcgtgctcgc cggcgccatc gccatcctcg
      841 tcggctacct ggccgtcacg aagtgcgaca tccgcccggc aaacgacgcc aggtgaggtc
      901 gaggactcat cggcgcgccc cgttccccgg tgtccttctc gccgtcatag cgctggccac
      961 cggctgttcg acgccgggtg gtggtcacgg tccgtcggtg gcgtcggagg cggtgtcggc
     1021 cccggcgacg accgccacgt cgcagttgcc tttcgagtcg acgacatcct cgacggcccg
     1081 gccgatcacg gccccctcct ccacgacatc ctcgacaccg tcggtggccg caccgatcgc
     1141 gctggcgccg gccgggtcac cgtgcggctt ccgggccggc tccccggtcc ggtacgccca
     1201 cgtggtgtgg atctggatgg agaaccgcac ctatggcgac gtcgtcggga acgccgctgc
     1261 cccgtacgag acatcgttgg ccgctcggtg cggcacggac cgcgactacc accaggtcgg
     1321 aagcccgtcc cttcccaact acctcggcgc cacttccgga cagacctatg gcatcgccga
     1381 cgacgccgac ccggcggccc acccgatcac cgccgacaat ctcttccggc aggtccggac
     1441 ggccggtgga acggaacgca gctatgtcga gaacatgccg accaactgcg ccggtgcacc
     1501 tcaggggacg tacgccgtga aacacaaccc cgcgacgtac tacgacgggg gcggcgacca
     1561 cgccgcctgc ctggctgatg atgtgccgtt gggtagcacc acgaccggtc ccttgaccgc
     1621 cgatctcgac cgcggtcggc tcccgagctt cgcccttgtc gtcccggacc tctgcgacga
     1681 cggccacgat tgccccgccg ccacgggcga tcgctggctg gcgggctggc ttccccacat
     1741 cctgtacagc tccgcctacc ggtcggggaa cacggcggtc ttcgtcgtct gggacgaacc
     1801 gaccccgatg cccaacatcg tcatcagccc gacgacgcca cccggcctcg tgtcgtccgt
     1861 ggccgtcaac cactacgcgc tactgcgcac gaccgaggag ctcctgggcc tgcccctgct
     1921 cggcgaggcg gtgacgtcgc cgaccctccg gccgctcttc cggctgtgac gcgtgggagc
     1981 cgcctaccgg tcaggggttg agtcggtaac ccgcccccca gatcgtttcg atggaatccc
     2041 gtccgaacgg gcggtcgatg tgatcgcgca ggtagcgcac gtacacatcg acgacgttcg
     2101 agtcgccgtc ataggcaaag tcccaggcct ggaggagcgc actccgggac agcacctcgc
     2161 cgggatggcg catgaagagc tcaagcaacg agaacccctt ggggctgagc ttcaccgccg
     2221 tcccacaccg ggtcacctgc cgggaagcgg gatccagcgt caggtcgccc acgacgagcg
     2281 ccgccggtcg ctcgttcgtc cgccgccgca cgagagaacg gaggcgggcg gacagttcgt
     2341 cgaatgagaa aggcttcgcg aggtagtcgt cggcgccggc gtcgagaccg tcgacccggt
     2401 cgttcacacc gtcgcgggcg gtgagcagca ggatcggcgc ccaccggccc cggtcccgga
     2461 ggcgacggca gacctcgaac ccgtccggtg ccgggatcat cacgtcgaga acgatggcat
     2521 cgtagtcaca ctcggtggcc atccacagcg catcatctcc gttgtcgacg ttgtcgactg
     2581 cgtgcccctg ctccgcgaga acccggcgga ggagcccggc catcttcggt tcgtcctcga
     2641 ccaccagcaa ccgcacggcg cctccttcaa ctgcacgtga cctgtgaagc gtggacccga
     2701 gtccgtgagg aagtgctgaa ggcttcggcc cgcttgatgc cgggtcgtca ggaagctgaa
     2761 ttcgtcgtcc tggtccaccg gtgccgaccg cgccggccat agcccgcccg ggcgccgaca
     2821 cgacgccgtc ctccggaggc ccgctcccac gaacttcgct ggacccactt acgggcgtcg
     2881 gccccctgct gcgaggccgg aagggatctc gtcgggcgcc gcttccctgg cctttggggt
     2941 ccggtgccgg cggcgggagt gcatatactc gacgccgagc ggaatgatcg aggcggcgac
     3001 gatggccgcc tcgatgagcg tcaaatggtc ctgagcgctc ggaatggtct tgccgaggac
     3061 gaacccgagc atggtgacgc ctccagccca cagcaacgcc cccacggtgt tgtacagggc
     3121 gaacgttctc acctccatgc gagcgatacc ggcgatgggg ttggcgaagg tccggacaac
     3181 ggggatgaaa cgggcgacca cgatcgtctt cggcccgtac tggtcgaaat agcgctgcgc
     3241 ccgatcgacg tgctggcgct tgaagagccg cgaatcgggg cggcggagga gtgctgggcc
     3301 aacgtgacgg ccgatgaagt agccggtctg ggcgcccgcg acggccgcac cgaagagccc
     3361 gagaagaacg atcggcagat ccaggtgcac gggggccttc ctgccgacgg cgcaaaaaag
     3421 accagcgagg acgaggagcg aatcgccggg caggaagaag cccacgagga ggccggtctc
     3481 ggcgaagacg acggccagaa gccccgcggt gccgaacgtg gtgaggaggt gctggggatt
     3541 catggcaggt cgtccttcct tcgatcctga ccgtccgacc gacaccctga ggatggaccg
     3601 ctgacgatga ggatcttctg aaacggcgtc gggatacggc gcttcgcggg cgccatcctt
     3661 atcgggaggt atcgccttga aacgatggag atgttgtgga ggtcacagga actcgcgaag
     3721 agctggccaa ctcttgatca tgaccgtcgt ggcgccgtcc agcagtacgc aggaaccgaa
     3781 gccttccgct ccagtcggat tgtccaactg tctcattgtg gaaggtgtct ccgaccgcac
     3841 ggctcggcct gacggttcgg agctttggcc gtgctcccgt tgtcacaaga acgtgtgcct
     3901 ctcccctggc gggcggcg
//
LOCUS       DATGJT010000685         5839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_714995, whole genome shotgun sequence.
ACCESSION   DATGJT010000685 DATGJT010000000
VERSION     DATGJT010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5839
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_714995"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2646)
                     /locus_tag="VKX24_11865"
     CDS             complement(<1..2646)
                     /locus_tag="VKX24_11865"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ09225.1"
                     /translation="MPWRTRIIGREPETAELDAQWQRAAAGEFRFVVVVGEPGMGKTR
                     LAAEALEDRRRASIELSARAHPLGDTASFGLWVEALERHLRTLGKTEVARLCGGFLDD
                     LASLLRSVAVVRGAAPEREPPRPRLLEGLAVLLANLAEQAPVVVVLDDVHLADASSWD
                     ALHYLAGTLSTERILVVASARPGEMADYPVAQRVLLDLEQIGALHRVEIGPLPAEAVR
                     ELTEEVLGTAAEPELLDWLGSRAQGNPLFVLGLLQALVEEGGDLSRPELRSLPEGLAE
                     RVRVRMRRLDDRQREIIDILAVAGGRVELGDVVVLCDRPLEDLGPALQDLVRSRFVAE
                     AREGRTFSYEISHPLIQETVYEGIVGARRVVLHRQVGRVLLTMGRLGEAAPHFARSAE
                     VGDPEALAVLSDALHQAEERGAYGEGLRILGALVELLPAGDRRWVEVATAFAGRAEWV
                     FDHRADADFAAAIDALRAIDAHLEGSGDLLQRASIKSRLTSFLAWGTGELDQAADTAA
                     QALDLFTRAGDRSGRLLAALEVAYVKGLAGDLPALEAGCREVAEAAREAGDGAVAARA
                     VGVLGTVLFYQGRFREAEETLRRSVADAKADGSPYRITWNLMSLGWSLGMEGRLDEAL
                     RCFAEAKEANPAWREGNVLELESHVRWLAGDLAGSLRCTQESVTISPGMSSRRRGMGM
                     VIAALDTVEIGEIEETRRHVASVRRVYGDSQWYMATDLARHAAALLARAEGHPEAARE
                     QLARAVDGVVGMGAMAFAPPILLDLVEVALAAGEAAEAAQAVEQLERLAKEIDRDLYR
                     AIAAVGRALLRLETSDCEGAVEPARTAVGLLDGSGYDVLLGRALDVLGRAARDRAEAV
                     DALERAVSAFDRCQAVPRRDRTVEAL"
     gene            complement(2677..4992)
                     /locus_tag="VKX24_11870"
     CDS             complement(2677..4992)
                     /locus_tag="VKX24_11870"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: protein motif:HMM:NF002895.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HLJ09226.1"
                     /translation="MTDAALAGKAIRADRDALFADPALRGRAFCRAYANRADAWLTTL
                     LGNESDVALVAVGGYGRAELAPGSDLDVVLVHKGRKDVRELAERIWYPLWDAGLKLGH
                     GVRTVKEALALAATDVDTATSLLDVRLVAGDSGFSDELSRRAETQWQSRSDRWLTVVG
                     QAVAERHERAGEVAFLLEPDLKEGRGGLRDVHAQHWAEAARRILLEGDEAALAEAYGT
                     LLDVRVALHRRTGKASDRLLLQEQDGIAADLGYADADVLMAEVAAAARTIAWTSDETW
                     DRILSSVKGPRGRSAAADRHVGPGVVVRDGVVELTADADPLSDPTLVLRAAAAAAEAG
                     LRLSRPAVDRLAVEAAALGDPWPEEAKLAFVRLLGAGPAAIPVIETLDQRGLMTRTLP
                     EWEAVRNRPQRNAYHRFTVDRHLCEAAAEAARLSSRVRRPDLLLVGAFLHDIGKGYPG
                     DHSEAGVDLVDKIGPRMGFPPEDVAVLRALVRHHLLLPETATRRDLSDEATISAVAAA
                     VGDQTTLELLAALTEADSLATGAAAWGTWKAGLVTELVERTAPVLAGQRPAAAPEPPP
                     DGTADLIARARDAGALVLDGDGPLVTVVAPDRPGLFWRVAGTLALHGLDVVSARAWSS
                     ADGYAVERFRVQSVFGRTPDWPAVESDLNRVLAGRLSLEARLADRARAYASRPRPPSA
                     APARIEVSIDNDASDSATVIEVRAPDRIGTLHRITKALAELELDVRLAKVASLGHEVV
                     DAFYVVDQNGAKLTDDDHLREIQRGIAVHLQ"
     gene            complement(5040..5378)
                     /locus_tag="VKX24_11875"
     CDS             complement(5040..5378)
                     /locus_tag="VKX24_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003878721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HLJ09227.1"
                     /translation="MKLITAIIKPFKLDEAKEALRGLGVAGMTVSESQGFGRQRGHTE
                     VYRGTEYTVDFVPKVRVEVLVDDSDVDRVAGAIVSAARTDKIGDGKVWITPVEQVIRI
                     RTGEMGPDAL"
     gene            complement(5375..>5839)
                     /locus_tag="VKX24_11880"
     CDS             complement(5375..>5839)
                     /locus_tag="VKX24_11880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013705020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HLJ09228.1"
                     /translation="GAVAGLVAITPCAGFVSGISPIIIGFVAGAVCFLAIQLKFRFGY
                     DDALDVIGVHLVGGIVGSLMVGLFADKAINPLGADGLFYGGGATLLGYQAVAVGATLV
                     WSGVISFVLAKVISATIGLRCSDDEEIAGLDLSQHAETAYSFGELGSMGRTG"
BASE COUNT          741 a         2182 c         2206 g          710 t
ORIGIN      
        1 cagcgcctcc accgtgcggt cccggcgggg gacggcctgg cagcggtcga aggcgctcac
       61 cgcccgctcc agggcgtcga cggcctcggc ccggtcgcgg gcggcccggc cgaggacgtc
      121 gagcgcccgg ccgaggagga cgtcgtagcc ggaaccgtcg agaaggccca ccgcggtgcg
      181 ggccggttcg accgccccct cgcagtcgct ggtctcgagc cggaggaggg cccggccgac
      241 ggcggcgatg gcccggtaga ggtcccggtc gatctccttg gccagccgct cgagctgctc
      301 gacggcctgg gcggcctcgg cggcctcgcc ggcggcgagg gccacctcca cgaggtcgag
      361 gaggatcggc ggggcgaagg ccatcgcccc catccccacg acgccgtcga cggcccgggc
      421 cagctgctcc cgggcggcct cggggtggcc ctccgcccgg gccagcaggg cggcggcgtg
      481 gcgggccagg tcggtggcca tgtaccactg cgagtcgccg tagacccgcc ggacggaggc
      541 cacgtggcgg cgggtctcct cgatctcgcc gatctcgacc gtgtcgagcg ccgcgatcac
      601 catccccatg ccccggcggc ggctgctcat gccgggggag atcgtcaccg actcctgggt
      661 gcagcgcagc gacccggcca ggtcgccggc cagccagcgg acgtggctct ccagctccag
      721 gacgttgccc tcccgccagg cggggttcgc ttccttggcc tcggcgaagc accgcagcgc
      781 ctcgtcgagg cggccctcca taccgagcga ccagcccagc gacatcaggt tccaggtgat
      841 ccggtagggg ctgccgtcgg ccttggcgtc ggccacgctg cggcgcaggg tctcctccgc
      901 ctcccggaac cggccctggt agaagaggac ggtgccgagg acgccgacgg cccgggcggc
      961 gaccgccccg tcgcccgcct cccgggcggc ctcggccacc tcccggcagc cggcctccag
     1021 cgccggcagg tcgccggcca ggcccttgac gtaggcgacc tcgagggcgg ccagcagccg
     1081 gccggaccgg tccccggccc gggtgaagag gtcgagggcc tgggcggccg tgtcggccgc
     1141 ctggtcgagc tcgcccgtcc cccaggccag gaagctggtc aggcgggatt tgatgctggc
     1201 ccgctggagc aggtcgccgc tgccctcgag gtgggcgtcg atggcccgca gggcgtcgat
     1261 ggcggcggcg aagtcggcgt cggcccggtg gtcgaagacc cactcggccc ggccggcgaa
     1321 ggcggtggcc acctcgaccc agcgccggtc cccggccggg agcagctcga ccagggcgcc
     1381 gaggatccgc aggccctctc cgtaggcgcc gcgctcctcg gcctggtgga gggcgtcgga
     1441 cagcacggcc agcgcctcgg ggtcgccgac ctcggccgag cgggcgaagt ggggggcggc
     1501 ctcgccgagg cggcccatgg tcagcagcac ccgcccgacc tggcggtgga gcaccacccg
     1561 ccgggcgccc acgatcccct cgtagaccgt ctcctggatg agggggtggg agatctcgta
     1621 ggagaacgtc cggccctccc gggcctcggc cacgaaccgg gaccgcacca ggtcctgcag
     1681 ggccgggccg aggtcctcca gcggccggtc gcagaggacc accacgtcgc cgagctccac
     1741 ccgcccgccg gccacggcga ggatgtcgat gatctcccgc tggcggtcgt cgaggcgacg
     1801 catgcggacc cggacccgtt cggccaggcc ctccggcagc gaccgcagct ccggccggga
     1861 caggtcgccg ccctcctcga ccagcgcctg gagcagcccc agcacgaaca gcgggttgcc
     1921 ctgggcccgg ctcccgagcc agtcgaggag ctcgggctcg gccgccgtcc cgaggacctc
     1981 ctcggtcagc tcccgcaccg cctcggccgg cagcgggccg atctccaccc ggtggagggc
     2041 gccgatctgc tccaggtcga ggaggacccg ctgggccacc gggtaatcgg ccatctctcc
     2101 cggccgggcc gaagccacca cgaggatccg ctcggtcgag agggtgccgg ccaggtagtg
     2161 gagggcgtcc caggaagagg cgtcggccag gtggacgtcg tcgaggacga cgacgaccgg
     2221 cgcctgctcg gccaggttgg ccagcaggac cgccagcccc tccaggaggc ggggccgggg
     2281 cggctcccgc tccggggcgg ccccccgcac gacggcgacg ctgcggagca gggaggcgag
     2341 gtcgtcgagg aagccgccgc agagccgggc gacctcggtc tttcccaggg tgcggaggtg
     2401 gcgctccagc gcctccaccc acagcccgaa agaggcggtg tcgcccaggg gatgggcccg
     2461 ggcggagagc tcgatcgacg cccgccggcg gtcctccagc gcctcggccg ccagccgggt
     2521 cttgcccatc ccgggctcgc cgaccaccac cacgaaccgg aactccccgg ccgcggcgcg
     2581 ctgccactgc gcatccagct cggccgtttc cggctcgcgc ccgatgatcc gggttctcca
     2641 gggcatctct cctccgcccc gaagggtacc gatcgtttac tgcagatgga cggcgatgcc
     2701 ccgctggatc tcccggaggt ggtcgtcgtc ggtgagcttg gcgccgttct ggtcgaccac
     2761 gtagaaggcg tcgacgacct cgtggccgag gctcgccacc ttggccaggc ggacgtcgag
     2821 ctccagctcg gccagtgcct tggtgatgcg gtgcagcgtc ccgatccggt ccggggcccg
     2881 cacctcgatc accgtggcgg agtccgaggc gtcgttgtcg atggagacct cgatccgggc
     2941 cggggcggcc gacggcggcc gggggcggct ggcgtaggcc cgggcccggt cggcgaggcg
     3001 ggcctcgagc gagagccggc cggccaggac ccggttgagg tcggactcca ccgccggcca
     3061 gtccggcgtc cggccgaaga cgctctggac ccggaaccgc tcgacggcgt agccgtcggc
     3121 gctcgaccag gcccgggccg acacgacgtc gaggccgtgg agggccagcg tccccgccac
     3181 ccgccagaac aggccgggcc ggtcgggggc gacgacggtc accagcggcc cgtcgccgtc
     3241 gagcaccagg gctccggcgt cccgggcccg ggcaatcaga tccgccgtgc cgtcgggcgg
     3301 gggctcgggc gccgcggccg gccgctgccc ggccagcacc ggggcggtcc gctccaccag
     3361 ctcggtcacg agccccgcct tccaggtgcc ccaggcggcg gcgccggtgg ccagcgagtc
     3421 ggcctcggtc agggcggcga gcagctccag cgtcgtctgg tcgccgacgg cggcggccac
     3481 cgccgagatc gtggcctcgt cgctcaagtc gcgccgggtc gccgtctcgg gcagcagcag
     3541 gtggtggcgg acgagcgccc gcaggacggc gacgtcctcg ggcgggaacc ccatccgggg
     3601 cccgatcttg tccacgaggt cgacgccggc ctcgctgtgg tcgccgggat agcccttgcc
     3661 gatgtcatgg aggaaggccc cgacgagcag caggtcgggg cggcgcaccc ggctactcag
     3721 ccgggcggcc tcggcggccg cctcgcagag gtgccggtcg acggtgaagc ggtggtaggc
     3781 gttgcgctgc ggccggttgc ggacggcctc ccattccggc agcgtcctcg tcatgaggcc
     3841 ccgctggtcg agggtctcga tgaccgggat ggcggcgggg ccggcgccga gcaggcgcac
     3901 gaaggccagc ttcgcctcct cgggccaggg atcgccgagc gccgccgcct cgacggccag
     3961 gcggtcgacg gccgggcggg agagccgcag gcccgcctcg gcggcggcgg ccgccgcccg
     4021 cagcaccagc gtcgggtcgg agagcgggtc ggcgtcggcg gtgagctcga cgacgccgtc
     4081 gcggacgacg acgcccgggc cgacgtggcg gtcggccgcc gccgagcggc cccgggggcc
     4141 cttgaccgac gagaggatgc ggtcccacgt ctcgtcgctg gtccaggcga tggtccgggc
     4201 ggcggcggcc acctcggcca tgaggacgtc ggcgtcggcg tagccgaggt cggcggcgat
     4261 gccgtcctgc tcctggagga ggagccggtc cgacgccttg cccgtccgcc gatggagggc
     4321 gacgcgcacg tcgagcagcg tgccgtaggc ctcggccagg gcggcctcgt cgccttccag
     4381 gaggatgcgc cgggcggcct ccgcccagtg ctgggcgtgg acgtcgcgca ggccgccccg
     4441 gccctccttg aggtcgggct cgaggaggaa ggcgacctcg ccggcccgtt cgtggcgttc
     4501 ggccacggcc tgcccgacga ccgtcagcca ccggtcggag cggctctgcc actgggtctc
     4561 ggcccgccgg gacagctcgt ccgagaaccc ggagtcgccg gccacgagtc gcacgtcgag
     4621 cagcgacgtg gcggtgtcga cgtcggtggc ggccagcgcc agcgcctcct tcaccgtgcg
     4681 gacgccgtgg ccgagcttga ggccagcgtc ccacagcggg taccagatcc gctcggccag
     4741 ctcccgcacg tctttccggc ccttgtgcac gagcacgacg tcgaggtcgc tgcccggcgc
     4801 cagctcggcc cggccgtagc cgccgacggc caccagggcg acgtcggatt cgttgcccag
     4861 caaggtggtc agccaggcgt cggcccggtt ggcgtaggcc cggcagaagg cccggccccg
     4921 cagggccgga tcggcgaaga gcgcgtcgcg gtcggcccgg atcgccttcc cggcgagggc
     4981 ggcgtcggtc acaggccggc tcggctcact gggcggctcg gctcacaggg cggctgggct
     5041 cataaggcat cgggccccat ctcgcccgtc cggatgcgga tcacctgctc caccggcgtg
     5101 atccacacct tgccgtcgcc gatcttgtcg gtgcgggcgg cggagacgat ggcgccggcc
     5161 acccggtcga cgtcgctgtc gtcgacgagg acctcgaccc gcaccttcgg cacgaagtcc
     5221 acggtgtact cggtgccccg gtagacctcg gtgtggcccc gctggcggcc gaagccctgc
     5281 gactccgaga cggtcatgcc ggcgacgccg aggccccgca gcgcctcctt ggcctcgtcg
     5341 agcttgaacg gcttgatgat ggcggtgatg agcttcaccc cgtcctcccc atgctcccga
     5401 gctcgccgaa cgagtaggcc gtctcggcgt gttgcgagag gtcgagcccg gcgatctcct
     5461 cgtcgtcgct gcagcgcagc ccgattgtgg ccgagatcac cttggccagg acgaatgaga
     5521 tcacgccgga ccacaccagc gtggccccga ccgccacggc ctggtagccg agcagcgtgg
     5581 cgccgccgcc gtagaacagc ccgtcggcgc cgagcgggtt gatggccttg tcggcgaaga
     5641 ggccgaccat cagcgagccg acgatgccgc ccaccaggtg gacgccgatg acgtcgaggg
     5701 cgtcgtcgta gccgaagcgg aacttgagct ggatggccag gaagcacacc gctccggcca
     5761 cgaacccgat gatgatcggc gagatcccgc tcacgaaccc ggcgcagggg gtgatggcca
     5821 ccaggccggc cacggcgcc
//
LOCUS       DATGJT010000686         3753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_503591, whole genome shotgun sequence.
ACCESSION   DATGJT010000686 DATGJT010000000
VERSION     DATGJT010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503591"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VKX24_11885"
     CDS             complement(<1..503)
                     /locus_tag="VKX24_11885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09229.1"
                     /translation="MTGDGGPESAPDNPLGTLLVVQDLDTAIAQHEHRRLSLPERAAL
                     QALGERAAASNRVAAELTGRRDELAGRLAHLEEQSRAVVARRKTLEDRLLSARGAAGR
                     DLQAIEGEVAQLATRLDQLEEEELALMEEQEPLDLALAGHRAELAELAAESRRLQAKV
                     AELDTEI"
     gene            complement(500..1036)
                     /locus_tag="VKX24_11890"
     CDS             complement(500..1036)
                     /locus_tag="VKX24_11890"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HLJ09230.1"
                     /translation="MDRADLVALVAAHPPADERERAAEARFLAELDRLERPWDEHADP
                     VHVTASAVVVGKRGTVLHRHRLLGTWLQPGGHLEPGESPAEAARREVIEETGLDAKPP
                     DDGPLLLRVDVHQAGPARNHTHLDLCYLLRAPDVDPAPGPGESPEARWWDWEDALAVA
                     DEPLRAALAGARRWAGRP"
     gene            1132..1962
                     /locus_tag="VKX24_11895"
     CDS             1132..1962
                     /locus_tag="VKX24_11895"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HLJ09231.1"
                     /translation="MAGAGPSEFVVASFNVHAGIDGWGRPYDVVSVCRAIDADVLVLQ
                     ESWQPAGGVSTAAAVGAALGHQVTEVTLASGRRALPHPEASARWMRRLDWRTASHALF
                     LDSERPFPRAVLDSARFGAAEPGSWGIAVLSRLPVLTSEVLPLPRLRRDRANRAVVAL
                     DVELGGRRIGVAGTHMSHLSHGSALHFRAVARMLEQVFGGDEPVLFAGDMNLWGPPIH
                     AFLGQWRRAVKGKTWPAWRPHSQLDHLLVRGLSVVASGVWPESGSDHRPVWARLSLPT
                     "
     gene            1959..2354
                     /locus_tag="VKX24_11900"
     CDS             1959..2354
                     /locus_tag="VKX24_11900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09232.1"
                     /translation="MNALTLRRPALVAAATVAAAGLSAWAALTDPFTAGADTVTAIAI
                     ALGAAAAVAGWRTMTAPVLATEGRALWPWAALIGLVVAWELVSFFLGPRVDHPTISSL
                     YDAATHGARAVKGLLFFAWMCLGSFLVRR"
     gene            2351..2551
                     /locus_tag="VKX24_11905"
     CDS             2351..2551
                     /locus_tag="VKX24_11905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020523447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6186 family protein"
                     /protein_id="HLJ09233.1"
                     /translation="MTAQIASDATWAALAALTLALVVAAHLPRSRVERLSGLLHRIEA
                     GRVGYVAVLVGWMWLGWHFFAR"
     gene            complement(2576..3670)
                     /locus_tag="VKX24_11910"
     CDS             complement(2576..3670)
                     /locus_tag="VKX24_11910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014176507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09234.1"
                     /translation="MIPTVWLCGPPGVGKSVVGWALYQGLVADGVACAYVDIDQLGIC
                     YPEPLGDPGRHRLKAENLRAMAANVEAWGASRLVVSGVLDAVSGTEFGHLPRAAIVVC
                     RLRADADVLTGRLGERPGADPPAASPDETARWEGSTLADVVVDTAGLGVAEVVAEVRR
                     QLGRRPTAVGTADPPPAASALPAAGGGRAVFLCGPAGVGKSTVGFALFRRLLGSGRPA
                     AYVDLDQIGFCSPAPLDHGLRAANLAALWHHFGVAGAGTVVVVGPVGSAAEAAVYDRA
                     LEPTPCSWFRLQAGDAELTARILTRGSGGSWPQPGDPWRGAPPERLLAAAAAATVEAG
                     RLEESGPGRRVVTDGLAVEEIALSIWSHLG"
BASE COUNT          416 a         1471 c         1391 g          475 t
ORIGIN      
        1 tcgatctcgg tgtcgagctc ggccaccttc gcctggagtc ggcgggactc ggccgccagc
       61 tcggccaact cggcgcggtg accggcgagg gcgaggtcga gcggctcctg ttcctccatg
      121 agggcgagct cctcctcctc cagttggtcg aggcgggtcg ccaactgggc cacctccccc
      181 tcgatcgcct ggaggtcgcg cccggcggcg ccgcgggccg agagcagacg gtcctcgagg
      241 gtcttgcgcc gggccaccac ggcccgggac tgctcctcca ggtgcgccag ccggccggcc
      301 agctcgtccc gccgcccggt gagctcggcg gcgacccggt tcgacgcggc cgcccgttcg
      361 ccgagcgcct ggagcgcggc ccgctcgggc agggacagcc tccggtgctc gtgctgggcg
      421 atcgccgtgt cgaggtcctg gacgacgagg agggtgccga gcgggttgtc gggcgccgac
      481 tcgggaccgc cgtccccggt cacggccgac ccgcccaccg gcgcgccccg gccaacgcgg
      541 cgcgcagcgg ctcgtccgcg accgccaggg cgtcctccca gtcccaccac cgggcctcgg
      601 ggctctcacc cgggccgggc gccgggtcca cgtcgggcgc gcgcaacagg tagcagaggt
      661 cgaggtgggt gtggttccgg gccgggccgg cctgatggac gtccacccgc aacagcagcg
      721 gtccgtcgtc gggcggcttg gcgtcgagcc ccgtctcctc gatcacctcg cggcgcgccg
      781 cctcggccgg ggactcgccg ggctcgaggt ggccgccggg ctgcagccag gtgccgagca
      841 gccggtggcg gtggagcacg gtccccctct tccccacgac caccgccgac gccgtgacgt
      901 gtaccgggtc ggcatgctcg tcccagggtc gttcgagacg gtcgagctcg gccaggaacc
      961 gggcctcggc cgcccgctcc cgctcgtcgg ccggagggtg ggcggcgacc agggccacca
     1021 ggtccgcccg atccaccacc gaacaccctt accacagctg gccccggcgt ccaccggcgc
     1081 cgcggcggat gatcccggcc gggccggggc cccgtctagg ttgtcggcgc gatggccggc
     1141 gccggaccga gcgagttcgt ggtcgccagc ttcaacgtcc acgccggcat cgacggctgg
     1201 ggccgcccct acgacgtggt gtcggtgtgc cgggccatcg acgccgacgt cctcgtgctc
     1261 caggagtcct ggcagccggc cgggggcgtg agcaccgccg ccgccgtcgg cgccgccctc
     1321 ggccaccagg tgaccgaggt caccctggcc agcggccgcc gcgccctccc ccacccggag
     1381 gcgtcggccc gctggatgcg ccgcctcgac tggcggacgg cgagccacgc cctgttcctc
     1441 gacagcgagc gcccgttccc ccgggccgtc ctcgactcgg cccgattcgg ggccgccgag
     1501 ccgggcagct ggggcatcgc cgtgctcagc cggctccccg tgctcacctc cgaagtgctg
     1561 cccctgcccc gcctccggcg ggaccgggcc aaccgggcgg tcgtggccct cgacgtcgag
     1621 ctcggcggcc ggcgcatcgg ggtggccggg acccacatgt cgcacctctc gcacggatcg
     1681 gccctccact tccgggcggt cgcccggatg ctcgagcagg tgttcggcgg cgacgagccg
     1741 gtgctgttcg ccggcgacat gaacctgtgg gggccgccga tccacgcctt cctgggccag
     1801 tggcggcggg ccgtcaaggg caagacgtgg ccggcgtggc gcccgcacag ccagctcgac
     1861 cacctgctcg tccgcggcct gtcggtcgtg gcctcgggcg tgtggcccga gtccggctct
     1921 gaccaccgcc ccgtctgggc ccggctctcg ctgcccacgt gaacgcgctc accctgcgcc
     1981 ggccggccct cgtcgccgcc gccaccgtcg cggccgcggg gctctccgcc tgggccgcgc
     2041 tgaccgaccc gttcacggcg ggcgccgaca cggtcacggc catcgcgatc gcgctggggg
     2101 cggccgccgc cgtggccggg tggcgcacca tgaccgcgcc ggtgctcgcg acggagggcc
     2161 gggcgctttg gccctgggcc gccctcatcg ggctcgtcgt ggcgtgggag ctcgtctcct
     2221 tcttcctcgg gccccgggtg gaccacccga cgatcagctc cctctacgac gccgccaccc
     2281 acggggcgcg ggcggtgaag gggctcctct tcttcgcctg gatgtgtctg ggctcgttcc
     2341 tggtccgccg gtgaccgccc agatcgcctc ggacgcgacc tgggccgcgc tggccgctct
     2401 caccctggcg ctggtcgtcg cggcccacct gccccgctcg cgggtcgagc ggctctcggg
     2461 cctcctccac cggatcgagg ccggacgggt cggctacgtc gccgtgctgg tcgggtggat
     2521 gtggctcggc tggcacttct tcgcccggtg acgctccgcg cgcgggggtg cgagctcacc
     2581 cgaggtgcga ccagatggac aaggcgatct cctcgacggc caggccgtcg gtgacgacgc
     2641 gccggccggg tcccgactcc tccagccgtc ccgcctcgac ggtggccgcc gcggcggcgg
     2701 ccagcagccg ctccggcgga gccccgcgcc acgggtcgcc cggctggggc cagctgcccc
     2761 ccgacccgcg ggtgaggatc ctcgccgtca gctcggcgtc gcccgcctgc agccggaacc
     2821 acgagcaagg ggtgggctcg agggcgcggt cgtagacggc ggcctccgcg gccgagccga
     2881 cggggccgac gacgaccacg gtgccggccc cggcgacgcc gaagtggtgc cacagtgccg
     2941 ccaggttggc ggcgcgcagc ccgtgatcca ggggggccgg gctgcagaac ccgatctggt
     3001 cgaggtcgac gtaggcggcg ggccgcccgg atcccagcag ccgccggaag agggcgaagc
     3061 cgaccgtcga cttcccgacc cccgccggac cgcagaggaa gacggcgcgg ccgccgcccg
     3121 ccgccgggag ggcgctcgcg gcgggcggag ggtccgcagt cccgaccgcc gtcggccggc
     3181 gacccagctg ccgccggacc tcggcgacga cctcggcgac gccgaggccc gccgtgtcga
     3241 cgacgacgtc ggcgagcgtc gagccctccc aacgcgccgt ttcgtcgggt gacgccgcgg
     3301 gaggatccgc gcctggtcgt tcgccgaggc ggcctgtgag gacgtcggcg tcggcacgca
     3361 gccgacacac gacgatcgcc gcccggggca ggtgcccgaa ctcggtgccc gagaccgcgt
     3421 cgaggacacc cgacaccacg agacggctgg ccccccacgc ctcgacgttc gccgccatcg
     3481 cccgcaggtt ctccgccttc aggcggtgcc gaccggggtc ccccagcggc tccgggtagc
     3541 agatgccgag ttggtcgatg tcgacgtagg cgcaggcgac gccgtcggcg accagtcctt
     3601 gatagagcgc ccagccgacc acgctcttgc cgaccccggg cggtccacac agccagacgg
     3661 tagggatcac cccccgatca tggcgaccgg cgcggggtgt gggcgaggag ctcggatcgg
     3721 ccagagatcg acgagcgggg ctgcctgcag gag
//
LOCUS       DATGJT010000687         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_93913, whole genome shotgun sequence.
ACCESSION   DATGJT010000687 DATGJT010000000
VERSION     DATGJT010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93913"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VKX24_11915"
     CDS             complement(<1..396)
                     /locus_tag="VKX24_11915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013225982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HLJ09235.1"
                     /translation="MRTSRGFDFTGYKRPSLVRRVSTRMKAVGIETFADYLDFLQVDA
                     AEFTALFDTILINVTGFLRDPTAWETLSSEVIPGLLAYKQAAEPIRVWSAGCATGEEA
                     YSLAMVLAEVLGVDEMRERVKIYGTDVDEG"
     gene            complement(321..1553)
                     /locus_tag="VKX24_11920"
     CDS             complement(321..1553)
                     /locus_tag="VKX24_11920"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HLJ09236.1"
                     /translation="MGGQDIIVVGASAGGVEALSTLVAALPDDLPAAVFIVLHMAPHS
                     STALPRILARRTKLPVDHPRDGETIGPNRIYVAVPDRHLVLAGGTVRVTRGPKENGHR
                     PSVDTLFRTAAAGYGRRVVGVVLSGMRDDGTAGVRAIHDRGGVSVVQDPDEALFPGMP
                     QSALTGDHPDYVLPVGEMGALLSKLARNGRPGEGRSQAMADELDTELRWANPELAWAA
                     PADPPLGSPSGFTCPECHGGLWEIDDEGLPRYRCRVGHGFAAESLLVRQQGDLEAALW
                     IAYRALEERAALLRRLADRAQGRSAPVTAGHFRAEATGVNRQAEVVLAVLWSGGGRTD
                     EGESGSPDDRRGERGSEPWPTRASRAMTTPAPAASRRSAPERTRTSNGSSTTSGPAGG
                     STSRVTSAPAWSGASRPA"
     gene            complement(1598..1828)
                     /locus_tag="VKX24_11925"
     CDS             complement(1598..1828)
                     /locus_tag="VKX24_11925"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HLJ09237.1"
                     /translation="MGQAADELRADIERTREDMASTVDAIGERLSPKLQAERQIDRLR
                     EKGLDPQRAVLIAGAVLVLFLFLRRGRGRRDG"
     gene            complement(1804..>2054)
                     /locus_tag="VKX24_11930"
     CDS             complement(1804..>2054)
                     /locus_tag="VKX24_11930"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HLJ09238.1"
                     /translation="SLGAAGVFGLMSFLLLSFAAAWGLAEVLPEPVGFVIVGGAYGII
                     ALALLGFGRQRLKAVKPVPEQTVETLKEDVAWARQQMS"
BASE COUNT          285 a          749 c          723 g          297 t
ORIGIN      
        1 gccctcgtcg acgtcggtcc cgtagatctt cacccgctcc cgcatctcgt cgacgccgag
       61 gacctcggcc agcaccatgg ccaggctgta ggcctcctcg cccgtggcgc agccggcact
      121 ccagacccgg atcggttcgg cggcctgttt gtaggccagc aggccgggga tgacctcgga
      181 actcaaggtt tcccaggctg tcggatcgcg gagaaatccg gtgacgttga tgaggatggt
      241 gtcgaagagg gcggtgaact ccgcggcgtc gacctggagg aagtcgaggt agtcggcgaa
      301 cgtctcgatt ccgaccgcct tcatgcgggt cgagacgcgc cggaccaggc tggggcgctt
      361 gtaacccgtg aagtcgaacc cccggctggt cctgatgtag tcgaggagcc gttcgaagtc
      421 ctggtcctct ccggcgctga tcgccggctc gccgccggcg ccggcgtcgt catggctctg
      481 ctcgctcgcg tcggccatgg ttcagaccct ctctcgcctc gtcgatcgtc cggagacccg
      541 gattctccct catcggtgcg gccgccgccg gaccagagga cggcgaggac gacctcggcc
      601 tgccggttca ccccggtcgc ctcggcccgg aagtgcccgg cggtgaccgg ggcgctgcgc
      661 ccctgggccc ggtcggccag ccggcggagc agcgccgccc gctcctccag ggcccggtag
      721 gcgatccaca gcgccgcctc cagatcgccc tgctggcgga cgagcaggct ctcggcggcg
      781 aagccgtggc ccacccggca ccggtaccgg gggaggccct cgtcgtcgat ctcccatagc
      841 ccaccgtggc attccgggca ggtgaacccc gacggcgagc cgagcggcgg gtcggccggc
      901 gcggcccagg ccagttcggg gttcgcccag cgcagttcgg tatcgagctc gtcggccatc
      961 gcctgggacc gcccttctcc tggccgcccg ttccgggcca gcttggacag caacgcgccc
     1021 atctcgccga cgggaaggac atagtcgggg tggtcgccgg tcagcgcgct ctgcggcatc
     1081 ccgggaaaca gcgcctcgtc aggatcctgg acgacgctca cgccgccccg gtcgtggatc
     1141 gcccggacgc cggcggtgcc gtcgtcccgc ataccggaga ggacgacgcc caccacccgg
     1201 cggccgtacc cggcggcggc cgtccggaac agcgtgtcga ccgacggccg gtggccgttc
     1261 tccttcggtc ctctggtcac ccgcacggta cccccggcca gcaccaggtg gcggtcgggg
     1321 accgcgacgt agatgcggtt gggcccgatg gtctcgccat cgcggggatg gtcgacgggc
     1381 agcttcgtcc gccgggccag gatccggggc agggcggtgg acgagtgggg cgccatgtgg
     1441 aggacgatga agaccgcggc gggcaggtcg tcggggaggg ccgcaaccag ggtgctcaac
     1501 gcctcgacac cgccggccga cgcccccacg acgatgatgt cctggccgcc cacggttcct
     1561 ctcgttgcga ctcggtcgcc cggagcctac gtctgattca gccgtcgcgg cgaccgcgcc
     1621 cccgccggag gaacaggaac agcaccagga cggctccggc gatcaggacg gcccgctggg
     1681 ggtcgagacc cttctcccgg agccggtcga tctgccgctc ggcctgcagc ttggggctca
     1741 ggcgttcacc gatggcgtcg acggtcgacg ccatgtcctc ccgggtgcgt tcgatgtccg
     1801 ccctcagctc atctgctgcc tggcccacgc cacgtcctcc ttcagggtct cgaccgtctg
     1861 ctcgggaacc ggcttgacgg ccttgagccg ttgccggccg aacccgagca gggccagggc
     1921 gatgatcccg taagcgccgc cgacgatcac gaagccgacc ggctcgggga ggacctcggc
     1981 cagcccccag gcggcggcga acgacagcag caggaacgac atcaggccga agaccccggc
     2041 cgcgccgagc gagg
//
LOCUS       DATGJT010000688         2970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1443563, whole genome shotgun sequence.
ACCESSION   DATGJT010000688 DATGJT010000000
VERSION     DATGJT010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443563"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1284
                     /locus_tag="VKX24_11935"
     CDS             <1..1284
                     /locus_tag="VKX24_11935"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011957995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HLJ09239.1"
                     /translation="VFSQDFTVFGGSLGEVHSEKICKILDLALETGAPVIGINDGGGA
                     RIQEGAPSLAGYAYIFDRNVRSSGVIPQITVILGPSAGGAVYSPALTDFVFMCEGTSH
                     MFITGPDVIKAVTGETVTHEELGGAMTHATKSGVAHFVGSDEENTLSQVRYLMSFLPS
                     NNLEDPPYYGPSDDPERREARLRELLPDAANKAYDMGELIRLVVDDGEYFEVHEHWAG
                     NILTGFARLNGHVVGVVANQPKILAGTLDIDSSSKGARFVRFCDAFNIPLLCFVDVPG
                     FLPGTNQEYGGIIRHGAKLLYAFTEATVPRLTVIVRKAYGGAYLVMNSKHIRADVSYA
                     WPTAEIAVMGPEGAVNIIFRRELERAEDPVARKAELIEEYREKFSNPFVAAERGFVDD
                     VIEPEETRPRLIASLEMLLTKRETLPPRKHGNIPL"
     gene            1293..1595
                     /locus_tag="VKX24_11940"
     CDS             1293..1595
                     /locus_tag="VKX24_11940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09240.1"
                     /translation="MSDADFEVFRIHGNPTPEEQSAVTEALSEFLARRRPQRQETAVS
                     PGMPRAAWVLAARLAARRGGLVDARGALGAGTWAATTRIPVGGRAFEGLGGRGDAR"
     gene            complement(1715..2893)
                     /locus_tag="VKX24_11945"
     CDS             complement(1715..2893)
                     /locus_tag="VKX24_11945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014142615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLJ09241.1"
                     /translation="MDYDLPEETTELRRLVRDFAEGEVRPRAAQFDAKAELPMDIVRG
                     MGRLGLFGLVLPEAYGGAGADFINLCVAIEELARVDSSVAITLSAGVGLGAMPFALFG
                     SEDQKRAWLPPMAAGEALGAFGLTEASGGSDAGALRTTARSDGDDWVIDGTKAFITNA
                     GTPISRVVCVAAISGRTERGGKEISTICVPHGSPGFSVGRAYRKLGWRASDTRELVFE
                     ECRVPAGNLVGQRGEGYRNFLEILDGGRVAIAALAVGLAQGCLEESMAYARRRTAFGR
                     EIGGYQAIQFKLADMATRIAAAREQVYKAAWLRDRGRPFKSAASMAKLFASEVAMDAA
                     REAVQIHGGYGYIEEFPVARHFRDAKILEIGEGTSEIQRMLIARDLGLPDAIPQAPPS
                     "
BASE COUNT          433 a         1090 c         1024 g          423 t
ORIGIN      
        1 gtgttcagcc aggacttcac cgtgttcggc gggtcgctcg gcgaggtcca ctcggagaag
       61 atctgcaaga tcctggacct ggcgctcgag accggtgccc cggtgatcgg catcaacgat
      121 ggcggcggcg cccggatcca ggagggcgcg ccgtcgctgg ccggctacgc ctacatcttc
      181 gaccgcaacg tccgcagctc cggggtgatc ccgcagatca cggtgatcct ggggcccagc
      241 gccggcgggg cggtctactc cccggccctc accgacttcg tcttcatgtg cgaaggcacg
      301 tcgcacatgt tcatcaccgg cccggacgtg atcaaggcgg tcaccggcga gacggtgacc
      361 cacgaggagc tcggcggggc catgacccac gccaccaagt ccggcgtcgc ccacttcgtc
      421 ggctcggacg aggagaacac gctgtcgcag gtccgctacc tgatgtcgtt cctgccctcg
      481 aacaacctcg aggacccgcc ctactacggc ccgagcgacg accccgagcg ccgggaggcc
      541 cgactccggg agctgctgcc ggatgccgcc aacaaggcct acgacatggg cgagttgatc
      601 cggctggtcg tcgacgacgg cgagtacttc gaggtccacg agcactgggc gggcaacatc
      661 ctgaccggct tcgcccggct gaacggccac gtggtcgggg tcgtcgccaa ccagccgaag
      721 atcctcgccg gcaccctcga catcgactcg tcgtcgaagg gcgcccggtt cgtgcgcttc
      781 tgcgacgcct tcaacatccc gctgctgtgc ttcgtcgacg tgcccggctt cctgcccggc
      841 accaaccagg agtacggcgg catcatccgg cacggggcca agctgctcta cgccttcacc
      901 gaggcgaccg tgccccggct gaccgtgatc gtccgcaagg cctacggcgg cgcctacctg
      961 gttatgaact ccaagcacat ccgggccgac gtcagctacg cctggccgac cgccgagatc
     1021 gcggtcatgg gcccggaggg ggcggtcaac atcatcttcc gccgggagct ggagcgggcc
     1081 gaggacccgg tcgcccggaa ggccgagctg atcgaggagt accgggagaa gttctccaac
     1141 ccgttcgtcg ccgccgagcg gggcttcgtc gacgacgtga tcgagccgga ggagacccgg
     1201 ccccgcctga tcgcttccct cgagatgctg ctgacgaagc gggagaccct gccgccgcgc
     1261 aagcacggca acatcccgct gtagcgcatt ccatgagcga cgccgatttc gaggtgttcc
     1321 ggatccacgg caacccgacg ccggaggagc agtcggccgt caccgaggcg ctgagcgaat
     1381 tcctcgcccg ccggcgcccc cagcgccagg agacggcggt atcgcccggc atgccccgtg
     1441 ccgcctgggt gctcgccgcc cggctggccg cccgccgggg gggtctggtc gacgcccgcg
     1501 gcgccctcgg tgccggcacc tgggcggcga cgacccgcat cccggtcggg ggccgggcgt
     1561 tcgagggtct cgggggccgg ggcgacgccc gctgaggctc cggggctggg gttgctccgt
     1621 tggcgcggtg gattttcgcc gaaaacgcag aaaattcacc gcgccattgg tgaccctttc
     1681 tgactgacgg ctaccggccg tcctcggccc cggctcagga tggcggcgcc tgcgggatgg
     1741 cgtcggggag gcccaggtcg cgggcgatca gcatccgctg gatctccgag gtgccctcgc
     1801 cgatctccag gatcttggcg tcccggaagt gccgggcgac cgggaactcc tcgatgtagc
     1861 cgtagccccc gtggatctgc accgcctcgc gggcggcgtc catcgccacc tccgacgcga
     1921 acagcttcgc catcgatgcg gccgacttga acggccggcc ccggtcccgg agccaggctg
     1981 ccttgtacac ctgctcccgg gccgcggcga tgcgggtcgc catgtcggcc agcttgaact
     2041 ggatcgcctg gtagccgccg atctcccgcc cgaaggcggt ccggcgccgg gcgtaggcca
     2101 ttgactcctc caggcagccc tgggcgaggc cgacggcgag ggcggcgatc gccacccggc
     2161 ccccgtcgag gatctccagg aagttgcggt agccctcgcc ccgttgcccg acgaggttcc
     2221 ccgccgggac ccggcactcc tcgaacacca gctcccgggt gtcggatgcc cgccagccga
     2281 gcttgcggta ggcccggccg acgctgaagc ccgggctccc gtggggcacg cagatcgtgc
     2341 tgatctcctt gccgccccgt tcggtccgcc cgctgatcgc cgccacgcag acgacccggg
     2401 agatcggtgt gccggcgttg gtgatgaacg ccttcgtccc gtcgatcacc cagtcgtcgc
     2461 catcggaacg ggcggtcgtg cgcagcgcgc cggcgtccga gccccccgag gcctcggtca
     2521 ggccgaacgc cccgagggct tccccggccg ccatcggcgg cagccaggcc cgcttctggt
     2581 cctcgctgcc gaacagggcg aagggcatgg cgccgagacc gacgcccgcc gacagcgtga
     2641 tcgccaccga ggagtcgacg cgggccagct cctcgatcgc cacgcacagg ttgatgaagt
     2701 ccgcaccggc gccgccgtag gcctcgggga gcaccaggcc gaagaggccg aggcgcccca
     2761 tcccccggac gatatccatc ggcagctcgg ccttggcgtc gaactgggcg gcccgggggc
     2821 ggacctcgcc ctcggcgaag tcacggacga gccggcggag ctcggtggtc tcttcgggca
     2881 ggtcgtagtc cacagtgcct caccggaggt gcggccacgc agggagcgcc cgtgcgcccc
     2941 gagcgcgagg ccgggagacg gagcataccc
//
LOCUS       DATGJT010000689         6784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_94245, whole genome shotgun sequence.
ACCESSION   DATGJT010000689 DATGJT010000000
VERSION     DATGJT010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6784
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94245"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..632)
                     /gene="folP"
                     /locus_tag="VKX24_11950"
     CDS             complement(<1..632)
                     /gene="folP"
                     /locus_tag="VKX24_11950"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HLJ09242.1"
                     /translation="MPPGNPVLRLGDRRYDLSQRCLVMGILNRTPDSFYDQGATFALD
                     RTLRRAEALVAEGADILDVGGVKAGPGTAVDEQEELDRVVPAVEALAARFDVPLSADT
                     WNANVLAAACAAGAVVGNDISGFADPNYLPTAARLGAAVVATHIRLAPRVRDPEPHYD
                     DLVADVAAFLVDRAERARAAGVAAERIVVDAGLDLGKTAAQSAVLLRESGR"
     gene            complement(910..2781)
                     /locus_tag="VKX24_11955"
     CDS             complement(910..2781)
                     /locus_tag="VKX24_11955"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HLJ09243.1"
                     /translation="MTPRSHPAADGAATPLRAQLGAVLAAVAVVVGARVGEKARWLAD
                     IPSAGGTAAAALLGLWLLDRVRARRTGRRRARRSFRRSSGPSWRPQERRLATAAGLVC
                     LTVLAAMSMARAIRGLDGLPARLAAAGVEGRVTVRLAADPEGRWSGARVPGRIESVAG
                     TAGRGGTGPSPPPDVVIGRAKAGGTVLVVATGAAAERLRLLEAGESAVLVGWFRAPAA
                     AERQWRWRHAGAVFEADDLVGAGRAAPALLRGANGVRHRVLAGTAGLSDTDRALVAGF
                     LVGDARALPPRVTGDFRAAGLSHLLVVSGANVTLALALVSPVLRRLGLLGRLAGGLAV
                     LVVFCAMARFEPSVLRAGAMAGLALLAAFVGRPAPGLRLLALAVTGLVLVDPFLTHSV
                     GFGLSCGASAGILLLSRPIARRLPGPALVRESLAVTAAAQIGVAPVALPAFGRLPLVA
                     LPANLAAAPAAAALSLWGLGAGLVGGFLGPPGGSAAGGPVAALQVPTALLTGWIRAVA
                     HLAGRWPVTVGPRPAVLLGLAAVVVGRRSGARPDGTLAAGSAGSRGQIDLQTDGVVDG
                     EEARPGDHQPQRDHGVEQVEFEAAAPARGAEEAVVPLHLGHDQQHLQREESAPDPGQ"
     gene            complement(2784..3677)
                     /locus_tag="VKX24_11960"
     CDS             complement(2784..3677)
                     /locus_tag="VKX24_11960"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HLJ09244.1"
                     /translation="MTDCPTPPGAGGGPLDGEPEAPVPSAAHRVRALWHRIRSGEDPW
                     AFGAVVVVAALAAGGLWFWAGARHGGVAVASASPGAPHEPAGAAGGGLHDRPGDGGRQ
                     PPGDGRAGPGADEHGRGGGDFEAGEGGAPGGPAGRGPETSGPPVAVHVAGAVAHPGLY
                     HLPAGARVADAVATAGGSLARADLDRLNLAARLADGQRIYVVRRGESPPPAPAASGLV
                     DGAAGDDATTGAPDPAEPVDLNAAGLAGLDGLPGVGPATARAILEERGRLGGFRSTRD
                     LLRVPGIGEGRFARLKDHVRV"
     gene            complement(3832..4158)
                     /locus_tag="VKX24_11965"
     CDS             complement(3832..4158)
                     /locus_tag="VKX24_11965"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HLJ09245.1"
                     /translation="MRRVEGDFPLVPPADVVRARIVVVPRLTPGVAAMTVGRVILLRR
                     DHRGDRALLAHELVHVRQWRELGAGRFLWRYLGAYVRGRTAGLGHQRAYEAIPLEVEA
                     RQLAGR"
     gene            complement(4181..6634)
                     /gene="leuS"
                     /locus_tag="VKX24_11970"
     CDS             complement(4181..6634)
                     /gene="leuS"
                     /locus_tag="VKX24_11970"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015739769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HLJ09246.1"
                     /translation="MSEGYDVQAIEAKWQRLWEERGTYEIDESDPRPKFYDLCMYPYP
                     SGPIHMGHVRNYTLGDVLCRYKTMQGFGVLSPMGWDSFGLPAENAAIAEGIHPGIITR
                     QRIATMKAQIKRLGSAYDWRREVSCCEPDYYRWTQWLFLQLHKAGLAYKQMAPVNWCP
                     SCQTVLANEQAEGGVCDRCGTEVVKRDLEQWMFRITQYAQQLLDDLDTVDWPERVKVM
                     QRNWIGRSEGVEFDIAVKDSDTKIRVFTTRIDTVFGMTYVVLAPEHPLVPELTAGTGR
                     EREVAEFVARVRNTSEVERQSAEGQLEKRGIFTGAYAVNPFNGAEVPLYLADYVLGSY
                     GTGAIMAVPGEDQRDFDFAVVYELPVIKTTERPEGWTDPIYTGPGRKINSGFLDGMQV
                     DEAKAAGIAWLEERDLGHAKVNYRLRDWLISRQRYWGCPIPIVYCAEHGAQPVPEEDL
                     PVLLPDDVEFLPSGESPLRRHEGFLNATCPKCGGPATRETDTMDTFVDSSWYFLRFCD
                     ARNAAAPFDPDKVARWMPVDQYIGGIEHAILHLLYARFFTKALADLELIPAGLREPFQ
                     RLFSQGMIRLGGSKMSKSKGNVVSPAQFFESHGADALRLFQLFVGPPGDDADWSDHGV
                     DGASRFLGRVWRLVSGEAGSPAVDRPETDADRAVIRARHALVGKVTDDFERWGYNTGV
                     AACMEYVNDLYKYIQSDEDPRRETLDEAVDALLLVLAPMAPHISAELWERRHGAGTHV
                     HEEPWPAYDAELAQAETVTMIVQVNGKVRDRIEVDAAISEVEMEKLALASSRVQEHLA
                     GRAPRNVIIVRPKLVNLVG"
BASE COUNT          919 a         2554 c         2484 g          827 t
ORIGIN      
        1 cgcccgctct cccggagcag caccgcgctc tgggcggcgg tcttgccgag atcgaggccg
       61 gcgtcgacga cgatgcgctc ggcggcgacg cccgcggccc gggcccgctc cgcccggtcg
      121 acgaggaagg cggcgacgtc ggcgaccagg tcgtcgtagt gcggctccgg gtcgcgcacc
      181 cggggagcga gacggatgtg ggtggccacg acggcggccc cgagccgggc ggcggtcggc
      241 aggtagttcg gatcggcgaa gccgctgatg tcgttcccga cgacggcccc ggcggcgcag
      301 gcggccgcga gcacgttggc gttccaggtg tcggcggaga gcggcacgtc gaaccgggcg
      361 gcgagcgcct ccaccgccgg aacgacccgg tcaagctcct cctgctcgtc gacggccgtg
      421 ccgggcccgg ccttcacccc gccgacgtcg aggatgtcgg cgccttcggc caccagtgct
      481 tcggcccgcc gcagggtgcg gtcgagggcg aacgtggcac cctggtcgta gaacgaatcg
      541 ggggtgcggt tgagaatgcc catcaccaga cagcgctggg agaggtcgta gcggcggtcg
      601 ccgagacgga ggaccgggtt gccgggcggc acggccgggc agggtagtgg ggagcgaaag
      661 cgaggcacca tgcagggtcg accgatgcgg ctgccgttcg ccggcggcgc cctcccgtcg
      721 ggagcggcgc tgctcgtgct gcggctggtc atggggccga tgctggcgta ccacggatac
      781 cgcaagctcg acgccggggt ggggaggttc gtggccacgg tcgcccggtc cggctttccg
      841 ttccccgagc tcctggcccg ggccaccatc gtgatcgaac tcgtcggcgg catctgtctc
      901 accatcggcc tactgacccg gatctggggc ggactcctca cgctgcagat gctgttgatc
      961 gtggccaagg tgcagtggca ccacggcctc ttcggcgccc cgggccgggg cggcggcttc
     1021 gaactcaacc tgctctacgc cgtgatcgcg ctggggctgg tgatcgccgg gccgggcctc
     1081 ttcgccgtcg accacgccat cggtctggag atcgatctga ccccgagagc cggcgctccc
     1141 cgccgcgagg gtgccgtcag ggcgggcgcc tgagcgccgc cccaccacga cggccgccaa
     1201 ccccagcagc accgccggcc ggggcccgac ggtcaccggc caccgcccgg ccaggtgggc
     1261 caccgcccgg atccagccgg tcagcagcgc cgtggggacc tgcagcgccg ccaccggccc
     1321 gccggcggcg gacccgcccg gcgggccgag gaacccgccg accagccccg ccccgagccc
     1381 ccacaggctg agggcggcgg ccgccggcgc ggcggccagg ttggccggca gggcgacgag
     1441 cggcaggcgg ccgaaggccg gcagggcgac cggcgccacc ccgatctggg cggcggcggt
     1501 gacggccagc gactcccgca ccagcgccgg gcccggcagg cggcgggcga tcggccggga
     1561 gagcaggagg atcccggcgc tggcgccgca ggagaggccg aagccgaccg agtgggtgag
     1621 gaacgggtcg acgagcacga gcccggtgac ggcgagggcg aggagccgta gccccggcgc
     1681 cgggcgcccc acaaacgcgg ccagcagcgc cagcccggcc atcgcccccg cccgcagaac
     1741 cgacggttcg aagcgggcca tggcgcagaa cacgaccagt accgccagcc ccccggccag
     1801 ccgcccgagc agccccagcc gtcgcaggac cggcgacacg agggccagcg ccagcgtgac
     1861 gttggccccc gacacgacca acaggtgcga caggccggcg gcccggaaat cgcccgtcac
     1921 ccggggcgga agggcgcggg cgtcgccgac gaggaagccg gccaccagcg cccggtcggt
     1981 gtcgctcagg ccggcggtac cggccagcac ccggtggcgg acgccgttgg ccccccgcag
     2041 cagcgccggt gccgcccgcc ccgccccgac gaggtcgtcg gcctcgaaca ccgctccggc
     2101 atggcgccag cgccactgcc gctcggccgc ggccggtgcc ctgaaccacc cgacgagcac
     2161 cgccgattcg ccggcctcca gcagtcgcaa ccgctccgcc gcggcgccgg tcgccaccac
     2221 cagcacggtc ccgcccgcct tggcccgccc gatgacgacg tccggcggcg gcgagggacc
     2281 cgtaccgcct cggccggcag ttccggccac gctctcgatg cggcccggga cgcgcgcccc
     2341 ggaccaccgg ccttcggggt cggcggcgag ccgcacggtg acccgtcctt ccacgccggc
     2401 ggcggccagg cgggcgggaa gcccgtcgag cccgcggatc gcccgggcca tcgacatggc
     2461 ggccagcacc gtcaagcaca cgagcccggc cgctgtcgcc aaccggcgtt cctgagggcg
     2521 ccatgacggc cctgaggaac gccggaacga ccgcctcgcc cgccggcgcc ccgtgcgacg
     2581 ggcccgaact cggtcgagga gccacaggcc caagagggcc gccgccgccg tcccgccggc
     2641 cgaagggatg tcggcgagcc accgcgcctt ctcccccacc cgcgccccga ccacgaccgc
     2701 cacggcggcg aggaccgcgc cgagttgggc tcgcagcggc gtcgccgccc cgtcggcggc
     2761 cgggtgggag cggggcgtca tcgtcagacc cggacgtgat ccttcaggcg ggcgaagcgg
     2821 ccctccccga tccccggcac ccgcagcagg tcgcgggtcg accggaagcc gccgaggcgg
     2881 ccccgctcct cgaggatcgc ccgggcggtg gccggcccga ccccgggcag cccgtcgagg
     2941 ccggccagac cggcggcgtt gagatcgacc ggttccgccg ggtcgggcgc cccggtcgtg
     3001 gcgtcgtcgc cggcggcgcc gtcgaccagc ccggaggccg ccggcgccgg cgggggcgac
     3061 tcgccccgcc gcacgacgta gatccgttgc ccgtcggcca gccgggcggc caggttcagg
     3121 cggtcgaggt cggcccgggc gaggctcccg cccgccgtcg ccaccgcatc ggccacccgc
     3181 gctcccgccg ggaggtggta cagcccggga tgggcgacgg ctccggccac gtgcaccgcc
     3241 accggcggcc cgctcgtctc cgggccccga ccggcgggcc caccgggcgc acccccttcc
     3301 cccgcctcga agtcgccgcc gccgcggccg tgttcgtcgg cgcccggccc ggcgcggccg
     3361 tcgcccggcg gctgacgacc gccgtcgccc ggtcggtcat gcaacccgcc cccggccgcg
     3421 ccggccggtt cgtggggcgc ccccggagag gccgaggcca cggccacccc gccgtgccgg
     3481 gctccggccc agaaccacag cccgccggcg gcgagcgccg cgacgaccac gacggcgccg
     3541 aaggcccacg ggtcctcccc cgaccggatc cggtgccaca gcgcccgcac ccggtgggcg
     3601 gcggacggaa caggggcctc gggctcgccg tcgagcgggc caccgccggc ccccggcggg
     3661 gttggacaat cggtcatggg ctacctccac cgcgccgaac ggccgaccga cggggaagca
     3721 gcgggggaag tgcgaccgcc cgggcaccct agggaacggc cccggtggcg cgccagcgaa
     3781 tttccgcgct ccggcacccg gggccgcccg ggtggcgggg ccggacggcc gtcagcggcc
     3841 ggccagctgc cgggcctcga cttccagcgg gatcgcctcg taggcccgct ggtggccgag
     3901 tcccgccgtc cggccccgga cgtaggcccc gaggtaacgc cagaggaagc ggcccgcgcc
     3961 gagctcgcgc cactgccgga cgtggacgag ctcgtgggcc agcagggccc ggtccccgcg
     4021 atggtcgcgg cggagcagga tcacccgccc gaccgtcatc gccgccacgc ccggtgtgag
     4081 ccggggtacg acgacgatcc gggcccggac gacgtcggcc ggcggcacca gcgggaagtc
     4141 gccctcgacg cgccgcactg ccgcccgccc tccgccgggg tcagccgacg agattgacca
     4201 gcttgggccg cacgatgatg acgttgcggg gcgcccgtcc ggcgaggtgt tcctgcaccc
     4261 gggacgaggc cagcgccagc ttctccatct ccacctcgct gatggcggca tcgacctcga
     4321 tgcggtcgcg gaccttcccg ttcacctgga cgatcatcgt gaccgtctcg gcctgggcca
     4381 gttcggcgtc gtaggccggc cacggctcct cgtggacgtg ggtgccggcg ccgtggcggc
     4441 gctcccacag ctcggcggag atgtgcggcg ccatcggcgc cagcaccagc agcagagcgt
     4501 cgaccgcctc gtcgagcgtc tcccgccggg gatcctcgtc ggactggatg tacttgtaca
     4561 ggtcgttgac gtactccatg caggcggcga cgccggtgtt gtacccccac cgctcgaagt
     4621 catcggtgac cttgccgacc agggcgtgcc gggcgcggat gacggcccgg tcggcgtcgg
     4681 tctcgggccg gtcgaccgcc ggcgagcccg cctcaccgct gaccagccgc cagacgcggc
     4741 cgaggaagcg cgaggcgccg tcgacaccgt ggtcggacca gtcggcgtcg tcgcccggcg
     4801 ggccgacgaa cagctggaac aggcgaaggg cgtcggcacc gtgactttcg aagaactggg
     4861 ccggcgagac cacattgccc ttggacttgc tcatcttcga cccgccgagg cggatcatgc
     4921 cctggctgaa gaggcgctgg aagggctccc ggagacccgc cgggatcagc tccaggtcgg
     4981 ccagcgcctt ggtgaagaac cgggcgtaga gcaggtggag gatggcgtgt tcgatgccgc
     5041 cgatgtactg gtcgaccggc atccaccggg cgaccttgtc ggggtcgaac ggcgcggcgg
     5101 cgttcctggc gtcgcagaaa cgcaggaagt accacgacga gtcgacgaac gtgtccatcg
     5161 tgtcggtctc gcgcgtcgcc gggccgccgc acttcgggca ggtggcgttg aggaagccct
     5221 cgtggcgccg cagcggcgac tcgcccgacg gcaggaactc gacgtcgtcg ggcagcagca
     5281 ccggcaggtc ctcctccggg accggctggg cgccgtgctc ggcgcagtac acgatgggaa
     5341 tggggcagcc ccagtaccgc tgtcgggaga tcagccagtc ccgcaggcgg tagttgacct
     5401 tggcgtggcc gaggtcccgc tcctcgagcc aggcgatgcc cgccgccttg gcctcgtcga
     5461 cctgcatccc atccaggaac ccgctgttga tcttgcggcc gggaccggtg tagatcggat
     5521 cggtccaccc ctccggccgt tccgtggtct tgatcaccgg cagctcgtag acgacggcga
     5581 agtcgaagtc gcgctggtcc tccccgggga cggccatgat ggcgccggtc ccgtagctgc
     5641 cgagcacgta gtcggccagg tacagcggga cttcggcgcc gttgaaggga ttgacggcgt
     5701 aggcaccggt gaagatgccg cgcttttcca gctggccctc ggccgactgg cgctcgacct
     5761 cggaggtgtt ccggaccctg gcgacgaact ccgccacctc gcgttcgcgt ccggtgccgg
     5821 cggtgagctc cggcacgagc gggtgctccg gagccagaac gacgtacgtc atgccgaaga
     5881 cggtgtcgat gcgggtggtg aacacccgga tcttcgtgtc gctgtccttc acggcgatgt
     5941 cgaactcgac gccctcggag cggccgatcc agttgcgctg catgaccttg acccgctccg
     6001 gccagtccac cgtgtcgagg tcgtcgagca gctgctgggc gtactgcgtg atccggaaca
     6061 tccactgctc gaggtcgcgc ttgaccacct cggtaccgca gcggtcgcag acgccgccct
     6121 cggcctgctc attggccagc accgtctggc acgacgggca ccagttgacc ggtgccatct
     6181 gcttgtaggc cagcccggcc ttgtggagct ggaggaacag ccactgcgtc cagcggtagt
     6241 agtcgggctc gcagcaggac acctcccggc gccagtcgta ggccgacccg agccgcttga
     6301 tctgcgcctt catggtggcg atccgctgcc gggtgatgat cccggggtgg atgccctcgg
     6361 cgatggcggc gttctcggcg gggaggccga aggagtccca gcccatgggg gacagcaccc
     6421 cgaagccctg catcgtcttg taccggcaca ggacgtcgcc caaggtgtag ttccggacgt
     6481 gacccatgtg aatgggcccc gacggatagg gatacatgca gaggtcgtag aacttcggcc
     6541 gcggatcgct ctcgtcgatc tcgtaggtgc cgcgctcctc ccacagccgc tgccacttgg
     6601 cttcgatcgc ctggacgtcg tacccctcgc tcatagggag gcgagtctac cggggcctcc
     6661 caccagcccc gatggtcatt tgcggcctac gtaccgacgc ctcctcgccc cccgctgcta
     6721 acgtggtggg ccgcatccgg ggccatagct cagttggcag agcgcttgca tggcatgcaa
     6781 gagg
//
LOCUS       DATGJT010000690         3587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_715447, whole genome shotgun sequence.
ACCESSION   DATGJT010000690 DATGJT010000000
VERSION     DATGJT010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3587
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_715447"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..1075)
                     /locus_tag="VKX24_11975"
     CDS             complement(176..1075)
                     /locus_tag="VKX24_11975"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: protein motif:HMM:NF002782.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HLJ09247.1"
                     /translation="MAGVGLRARRVRVPLRVPLGGSSSREAVLVEGPAGWGEFSPLPG
                     YACDPRACEEAVREAVVVGWPAPRRSGIPVNALVPAVGPDRASELAAEAAAAGIATVK
                     VKVGGGDPAADVDRVAAVRAALGPSGRIRLDANGAWDVETAVAMMRRLARFDPELLEQ
                     PVADIGDLARVRRRVEVPVAADESLRTLGDARRLAALEAADAVVVKVQPLGGVRAALR
                     IVEAAGVPAIVSSLYETSIGLAAGVALAAALPDLPYACGLGTATLLAGDVVADPLVPR
                     AGVVPVRRPEPDPVLLERWGIDG"
     gene            complement(1081..1941)
                     /locus_tag="VKX24_11980"
     CDS             complement(1081..1941)
                     /locus_tag="VKX24_11980"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007571264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046428 - 1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HLJ09248.1"
                     /translation="MNVWLAGARPRTLPASVSPVLVGTAVAAAQGTVVAWRAAAALVV
                     ALALQVGTNYANDYSDGRRGTDAHRAGPLRLTASGLVAPARVLRAAGLAFGVAALAGL
                     ALAVAVDLRLLVVGAACIAAGALYTGGPKPYGYAGFGELAVLVFFGLVATAGSAYVEL
                     ERLTGLAVLASVPVGLLACALLVANNLRDIDTDAASGKMTLAVRLGPARTRALYQGCL
                     GGALAGVVAVGILRPPALVALAASPLAVAPARLVARRRDAPGLIGALVGTARLQLVTS
                     VLLAAGLWIS"
     gene            2009..3238
                     /locus_tag="VKX24_11985"
     CDS             2009..3238
                     /locus_tag="VKX24_11985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019634604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HLJ09249.1"
                     /translation="MPAGDEAEAEAVAVLLPPPELARAAVALWDAGEAVVPLDPAAPA
                     ADVRRSLAALRPTALVDGDGRRPCPGGVPVPAGVAAVVATSGTTGERKGVDLTFAGLA
                     ASASAVTSAVGAGPGDGWLCCLPLHLVAGLAVVGRAWATGAPVAVHAGFDPEAVAEAA
                     RTAPFVSLVPTMLRRLLAGGSRAAAGFHHILLGGGPIDPGLLAAARDAGAVVSTTYGM
                     TETWGGVAHNGHPLEGVELRVDPARDGGGAGDDAVGEILVRAPMLMRGYRLWPEGTAA
                     AVDAGGWYRTGDLGRFDPEAGGRLRVLDRLGDVVNTGGVKVSPTEVERVLAGHPAIAD
                     VCVAGRPDPDWGERVVAFVVPAEPSAPPPLEDLRAFARRELPAAKLPREVVVVPAIPR
                     TAGGKALRRLLPGPAPR"
     gene            3258..>3587
                     /locus_tag="VKX24_11990"
     CDS             3258..>3587
                     /locus_tag="VKX24_11990"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ09250.1"
                     /translation="MSSAMGDLRLRPVTRDDLDYLVARQTPEITGPYNWFGFRSEAEI
                     VARFEEDGFLGDFYGKLIVEVDGAEGPVAIGDVSWHAVDYGPPPASRCWNIGITLDPR
                     WRGRGHGG"
BASE COUNT          434 a         1391 c         1376 g          386 t
ORIGIN      
        1 tcgccttccg gctggccgcc gggatcggcg accgggcggg tctctcgttc gtccccggcg
       61 ccggtcacgc cgcccacctc gagcgcccgc agtcggtggc cgccatcgtc aaccgcttcc
      121 tctccgcgct cccggcgccg acctgacgcc gcaacggccg ggacggggac gggcgtcacc
      181 cgtcgatccc ccaccgctcg agaaggaccg gatccggctc gggacggcgg accgggacga
      241 ctcccgcccg gggaacgagc gggtcggcca cgacgtcgcc ggccagaagc gtggcggtcc
      301 cgaggccgca ggcgtagggc aggtcgggga gggcggcggc cagggccacg ccggcggcga
      361 ggccgatcga cgtctcgtag agcgacgaga cgatggcggg cacgcccgcc gcttcgacga
      421 tccgcagcgc cgcccgcacg ccgcccagcg gctggacctt caccacaacg gcgtcggccg
      481 cctcgagcgc cgccagccgg cgggcgtcgc ccagggtgcg caggctttcg tcggcggcca
      541 ccggcacctc cacccggcgc cgcacccggg cgaggtcgcc gatgtcggcc acgggctgct
      601 cgaggagctc gggatcgaag cgggccagcc gccgcatcat ggcgacggcg gtctcgacgt
      661 cccaggcgcc gttggcatcg agccggatgc gtcccgacgg gccgagcgcc gcccgcaccg
      721 ccgccacccg gtcgacgtcg gcggccgggt cgccgccgcc aaccttcacc ttcacggtgg
      781 cgatgcctgc ggccgccgcc tccgccgcca gttcgctggc ccggtcgggt cccaccgccg
      841 ggacgagcgc gttgaccggg atcccggacc ggcgcggcgc cggccacccg acgacgaccg
      901 cttccctgac cgcctcctcg caggcccggg gatcacaggc gtagcccggc agtggcgaga
      961 actcccccca tccggccggc ccctcgacca gcaccgcctc ccgcgacgag ctgcccccca
     1021 acggcacgcg cagcggcacc cggacccgcc gcgcccggag gccgacgccg gccagtccgg
     1081 tcacgagatc cacaggccgg cggccaggag gacggaggtc accagctgga ggcgggcggt
     1141 cccgacgagg gcgccgatga gaccgggagc gtcccgccgg cgggccacca ggcgggccgg
     1201 tgcgacggcc agaggcgacg ccgccagggc gacgagcgcc gggggccgca ggatgccgac
     1261 ggcgacgacg ccggccagcg cgccgccgag gcagccctgg tagagagccc gggtgcgggc
     1321 cgggcccagg cggacggcca gcgtcatctt cccggaggcg gcgtcggtgt cgatgtcccg
     1381 gaggttgttg gccaccagga gggcgcaggc cagcagcccc accgggaccg acgccagcac
     1441 cgccaatccc gtgagccgtt ccagctcgac gtaggccgac cccgccgtgg ccacgagccc
     1501 gaagaagacc agcaccgcca gctcgccgaa accggcgtag ccgtaaggct tcggcccgcc
     1561 ggtgtagagg gcgccggcgg cgatgcaggc ggcacccacg acgagcagcc ggagatcgac
     1621 cgccaccgcc agcgccagtc ccgccagggc ggccaccccg aaggcgagcc cggccgcccg
     1681 gagaacccgg gcgggcgcca ccaggccgga ggccgtcagc cggagcgggc cggcccggtg
     1741 ggcgtcggtg ccgcggcgcc cgtccgagta gtcgttggcg tagttggtgc cgacctggag
     1801 cgccagggcc accaccagcg ccgccgccgc tctccaggcg accaccgtcc cctgggcggc
     1861 cgccaccgcc gtcccgacca ggacgggcga gaccgaggcg ggcagcgtgc ggggtcgcgc
     1921 ccccgccagc cagacgttca ctggtcctga aattcccggg tgccttcact ctgagagcga
     1981 tcactctcag gaactacggt agtcgccgat gccggcgggg gacgaggccg aggccgaggc
     2041 cgtggccgtg ctgctcccgc cgcccgagct cgcccgggcg gcggtggcgc tctgggacgc
     2101 cggagaggcc gtcgttccgc tcgacccggc ggcgccggcg gccgacgtcc gccgctcgct
     2161 ggccgccctc cggccgacgg ccctcgtcga cggcgacgga cggcggccct gccccggcgg
     2221 cgtgccggtt cccgccggcg tggccgccgt cgtggccacg tcggggacca ccggcgaacg
     2281 caagggagtc gacctgacct tcgccggact ggccgcctcg gcctcggccg tgacgtccgc
     2341 cgtgggcgcc ggcccggggg acgggtggct ctgctgcctg ccgctccacc tggtggccgg
     2401 cctcgccgtg gtcggccggg cctgggcgac tggcgccccg gtcgcggtgc acgccggttt
     2461 cgacccggag gcggtggccg aggcggcccg gacggcgccg ttcgtgtcgt tggtgccgac
     2521 gatgctgcgc cggctgctgg ccggcggctc ccgggcggcg gcgggctttc accacatcct
     2581 cctcgggggc ggcccgatcg accccgggct gctggcggcg gcccgcgacg ccggggcggt
     2641 cgtgtcgacg acgtacggga tgaccgaaac gtggggcggc gtcgcccaca acggccatcc
     2701 gttggagggc gtggaactgc gcgtcgaccc ggcccgcgac ggcggtggcg ccggcgacga
     2761 tgccgtggga gagatcctcg tgcgggcccc gatgctgatg cggggctatc gcctgtggcc
     2821 ggaggggacg gccgccgccg tcgacgccgg cggctggtac cggaccggcg acctcggccg
     2881 gttcgacccg gaggccggcg ggcggctgcg ggtcctcgac cgcctcggcg acgtcgtcaa
     2941 caccggcggc gtcaaggtga gcccgacgga ggtcgagcgg gtactggccg ggcacccggc
     3001 catcgccgac gtctgcgtgg ccggccggcc cgatccggac tggggcgagc gggtcgtggc
     3061 cttcgtggtg ccggcggagc cgtccgcgcc acccccgctg gaggacctgc gggccttcgc
     3121 ccgccgggaa ctgccggcgg cgaagctgcc ccgggaggtg gtcgtcgtgc cggcgatccc
     3181 ccggacggcg ggcggcaagg ccctccgccg cctcctgccc gggcccgctc cccgctgacg
     3241 gccggaaggc gccgatagtg tcgtcggcca tgggcgacct ccggctgcgg ccggtgacca
     3301 gagacgacct cgactatctg gtggcgaggc agacgccgga gatcaccggg ccctacaact
     3361 ggttcgggtt ccgctccgag gccgagatcg tggcccgctt cgaggaggac ggcttcctcg
     3421 gcgacttcta cggcaagctg atcgtcgagg tcgacggcgc cgagggcccc gttgccatcg
     3481 gcgacgtcag ctggcacgcc gtcgactacg ggccgccccc cgcctcccgg tgctggaaca
     3541 tcggcatcac cctcgatccc cggtggcggg ggcggggcca cggcggg
//
LOCUS       DATGJT010000691         3024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_822473, whole genome shotgun sequence.
ACCESSION   DATGJT010000691 DATGJT010000000
VERSION     DATGJT010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_822473"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VKX24_11995"
     CDS             complement(<1..215)
                     /locus_tag="VKX24_11995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 protein"
                     /protein_id="HLJ09251.1"
                     /translation="MKLRVLLVIAAVTAAGCSSASHGTDARATGSTGTSAPVLSPVSA
                     AASTSSSGAASSTTSSSLSVTTYGTPAG"
     gene            complement(240..1139)
                     /gene="sucD"
                     /locus_tag="VKX24_12000"
     CDS             complement(240..1139)
                     /gene="sucD"
                     /locus_tag="VKX24_12000"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020019708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HLJ09252.1"
                     /translation="MAIIIDENTRVVVQGLTGREGRFHALRNKAYGTKVVAGVTPGKG
                     GTDVEGVPVFDTMADAVAETGANASVIFVPARFTADAVYEAADSGVNVIVCITEGVPA
                     HDEARFVDYVHNAYPDTVLIGPNCPGLISPGKCNIGIMPGEITLAPGQSDTSPVGLVS
                     RSGTLTYQAVHELTQRGIGQTTCVGIGGDPVPGTGFIDCLSRFEADPDTTACVMIGEI
                     GGSDEETAAAYIASEMTKPVVAYVAGVTAPPGKKMGHAGAIVSGSKGTAAAKIEALEK
                     AGCRVARNPSQIGELMAEVLKGT"
     gene            complement(1144..2328)
                     /gene="sucC"
                     /locus_tag="VKX24_12005"
     CDS             complement(1144..2328)
                     /gene="sucC"
                     /locus_tag="VKX24_12005"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012936999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HLJ09253.1"
                     /translation="MDLFEYQGKQLLARFGVPVSPGEAVDTVDDAVAAAERLGYPVVV
                     KAQVQVGGRGKAGGIKLAGTTDEARLHASNILGMDIKGHVVRRLWVEKASDIAEEYYA
                     SFTLDRAAKKHLGMVSAKGGVDIEQVAEEDPAAIARVHIDPLVGIEDYHARQLVFGAR
                     LNPAARSGAISILKQLYKAFVELDADLVEVNPLILRPDGSVHALDAKVSLDDNAAYRH
                     PEFESLRSLASLDPRERAARERGLNYIGLDGEVGIIGNGAGLVMSTLDVVNQAGGRAA
                     NFLDVGGGAGAQTIANALEVITADPKVRSVLINIFGGITRCDLVAQGILDGFSTIDVT
                     VPVVVRLDGTSAEEGRAILAANPKDGLVPAATMLEAASRAVELAKAGGAGVSPGMSGA
                     EA"
     gene            complement(2365..2781)
                     /locus_tag="VKX24_12010"
     CDS             complement(2365..2781)
                     /locus_tag="VKX24_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HLJ09254.1"
                     /translation="MQRPYRVVVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLHQTP
                     EQVAETVIQEDADAVGLSLLSGAHNTLFPRVIAQLAEKGAGDVLVFGGGIIPEADIAA
                     LKDQGVAEIFTPGTPMQAIVDWLAGALDGREASLAG"
     gene            2820..>3024
                     /locus_tag="VKX24_12015"
     CDS             2820..>3024
                     /locus_tag="VKX24_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003877601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HLJ09255.1"
                     /translation="METAEITLENHDRHVVDLTEAAAAFCRPLGDGLLSVFAPHATAG
                     VALMELGSGSEPDLDEALERLLPR"
BASE COUNT          394 a         1098 c         1071 g          461 t
ORIGIN      
        1 ccggccgggg ttccgtaggt ggtgaccgac agcgacgacg acgtcgtcga cgacgccgcc
       61 ccggacgagg acgtcgacgc tgcggcggac accggcgaca gcaccggcgc cgacgtcccc
      121 gtcgacccgg tggcccgggc gtcggtgccg tgcgacgccg acgagcatcc ggccgcggtc
      181 accgccgcga tcaccagcag cacgcgcagt ttcaccaacg cccaccatag ggcgccgacc
      241 tacgtcccct tgagcacctc ggccatgagt tcgccgattt gggacggatt gcgggccacc
      301 cggcaaccag ccttttccag ggcttcgatc ttggccgccg ccgtcccctt cgagccggag
      361 acgatggcgc cggcgtggcc catcttcttg cccggcgggg cggtgacgcc ggccacgtag
      421 gccacgaccg gcttggtcat ctcggaggcg atgtaggccg ccgccgtctc ctcgtcggag
      481 ccgccgatct cgccgatcat cacgcaggcg gtcgtgtcgg ggtcggcctc gaagcgggac
      541 aggcagtcga tgaagcccgt cccgggcacc gggtcgccgc cgatgccgac gcaggtcgtc
      601 tgcccgattc cccgctgggt gagttcgtgg accgcctggt aggtgagcgt gcccgagcgc
      661 gacaccagac ccaccgggct ggtgtccgac tggccggggg ccagcgtgat ctcgcccggc
      721 atgatcccga tgttgcactt gccgggggag atgagcccgg ggcagttcgg cccgatcaac
      781 acggtgtcgg ggtaggcgtt gtggacgtag tcgacgaagc gggcctcgtc gtgggccggc
      841 acgccctcgg tgatgcagac gatcacgttc acaccggagt cggccgcctc gtagacggcg
      901 tcggcggtga agcgggccgg aacgaagatg accgaggcgt tggccccggt ctcggccacg
      961 gcgtcggcca tcgtgtcgaa caccggcacg ccctcgacgt cggtaccgcc cttgcccggc
     1021 gtcacgccgg ccaccacctt cgtgccgtag gccttgttgc gcagggcgtg gaagcggccc
     1081 tcccggccgg tcaggccctg gaccacgacc cgggtgttct cgtcgatgat gatcgccatc
     1141 gcctcaggcc tccgctccgc tcatcccggg ggacaccccc gcgcccccgg ccttggccag
     1201 ttccaccgcc cggctggccg cctccagcat ggtggccgcc ggtaccagcc cgtccttcgg
     1261 gttggcggcc aggatcgccc ggccctcctc ggcgctggtg ccgtcgaggc ggacgaccac
     1321 cggcaccgtc acgtcgatgg tcgagaaccc gtccaggatc ccctgggcca cgaggtcgca
     1381 gcgggtgatc cccccgaaga tgttgatgag caccgaccgc accttggggt cggcggtgat
     1441 gacctcgagg gcgttggcga tcgtctgggc gccggcgcca ccgcccacgt cgaggaagtt
     1501 ggccgcccgc ccgccggcct ggttgacgac gtcgagcgtg ctcatcacca gcccggcgcc
     1561 gttgccgatg atcccgacct cgccgtcgag cccgatgtag ttgaggccgc gctcccgggc
     1621 cgcccgttcc cgggggtcga gcgacgccag gctgcgcagc gactcgaact cggggtggcg
     1681 gtaggcggcg ttgtcgtcga gcgagacctt ggcgtcgagg gcgtggacgc tgccgtcggg
     1741 ccgcaggatc agcgggttga cctcgacgag gtcggcgtcg agctcgacga acgccttgta
     1801 gagctgcttg aggatcgaga tcgcaccgct gcgggcggcg gggttgagcc gggcgccgaa
     1861 gacgagctgg cgggcgtggt agtcctcgat gccgaccagc gggtcgatgt gcacccgggc
     1921 gatggccgcc ggatcctcct cggccacctg ctcgatgtcg acgccgccct tggcgctgac
     1981 catgccgagg tgcttcttgg ccgcccggtc gagcgtgaag ctggcgtagt actcctcggc
     2041 gatgtcgctg gccttctcga cccacagccg gcgcacgacg tggcccttga tgtccatccc
     2101 gaggatgttg gaggcgtgca gccgggcctc gtcggtggtg ccggccagct tgatgccgcc
     2161 ggccttgccc cgcccgccga cctgcacctg ggccttcacg accaccgggt agccgagccg
     2221 ctcggcggcg gccacggcgt cgtcgacggt gtcgaccgcc tcgcccggcg agaccggaac
     2281 gccgaagcgc gccagcagct gcttcccctg gtactcgaag agatccaacg tccgtccctt
     2341 tctcgtctct cctcggcgag cgcctcagcc ggcgaggctc gcctcccgcc cgtcgagcgc
     2401 cccggccagc cagtcgacga tcgcctgcat cggcgtcccg ggcgtgaaga tctcggccac
     2461 gccctggtcc ttgagcgcgg cgatgtcggc ttcggggatg atgccgccgc cgaagacgag
     2521 gacgtcgccg gcgcccttct cggccagctg ggcgatgacc ctggggaaca gggtgttgtg
     2581 ggcgcccgag aggagcgaca gcccgacggc gtcggcgtcc tcctggatca ccgtctccgc
     2641 cacctgctcc ggcgtctggt ggaggccggt gtagatcacc tcgaagccgg cgtcgcgcag
     2701 cgcccgggcg atgaccttgg cgccccggtc gtgcccgtcg aggccgggct tggccaccac
     2761 cactcggtac ggcctctgca tggggtttca cgatagagcc gccgtagcat cggcgccgga
     2821 tggagaccgc cgagatcacc ctggagaacc acgaccgcca cgtcgtcgac ctgaccgagg
     2881 cggccgccgc gttctgccgg ccgctggggg acgggctcct gtcggtcttc gctccccatg
     2941 ccaccgccgg cgtggcgctg atggagctcg gctcggggtc ggagcccgac ctcgacgagg
     3001 ccctggaacg gctcctgccc cggg
//
LOCUS       DATGJT010000692         2240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_408007, whole genome shotgun sequence.
ACCESSION   DATGJT010000692 DATGJT010000000
VERSION     DATGJT010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408007"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VKX24_12020"
     CDS             complement(<1..215)
                     /locus_tag="VKX24_12020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09256.1"
                     /translation="MGVVALQLPAGWVAAIALWAGCTGGFLVAGWAGVNLRRWPLARL
                     AFFRDRLVVLRGRQEMLALWDQMESVTL"
     gene            383..>2240
                     /locus_tag="VKX24_12025"
     CDS             383..>2240
                     /locus_tag="VKX24_12025"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase/ligase"
                     /protein_id="HLJ09257.1"
                     /translation="MDVTAERADIDQAVSGKTVPTIFADAAETWADRPALHWRTNGEW
                     HQLTWHEYRDQVAAMTMALRELGFGRDQFGLIMARNVPEHVIADLALVHAGGAAISVY
                     NTLAPEQVEYIANHSEATVAFVEDEGFLAKFLAIRESTPRLRHIVLVRGKAPEGVLAW
                     DDLMAKGRATYEAHPDAFKATWRAVGPEDTISLIYTSGTTGPPKGVMYSHNNVVWTCE
                     STTRRLKFQEETLVSYLPLAHVAERFTSQWNGINAGHEVYFCPDPNELLAYLVEARPT
                     VFVGVPRVWEKLMSGIQAGIAAEPDETKRQMAAGAIAAAQQGYRLRRDGQEVPAELAA
                     VTERAAPLFQMLLGKVGLDKCRLAITSTAPCRPEVHEFWAALGLPLYEVWGMSELTGP
                     ATAVPPEHHKAPSIGTALPGVEVKLGEDGEILVRGGNVMVGYFRDPVKTAETIDKDGW
                     VHSGDIAELMPDGQLKIVDRKKELIITSAGKNISPSNLEALAKSSPIIGQAVAVGDSR
                     NFISVLVVLDPQVAPLWAKRQGLEEMALADLAEHPKIVDEVRRALTVANTHLSRVEQF
                     KRFTILPAEWSPESEELTPTLKLKRRVIESKYSPQIEAMYATPAGGHSVDPQR"
BASE COUNT          405 a          756 c          778 g          301 t
ORIGIN      
        1 agggtcacgg actccatctg gtcccagagg gcgagcatct cctggcgccc acggagcacg
       61 accaggcggt cccggaagaa cgccagcctc gccaggggcc agcggcgcag gttcacgccg
      121 gcccagccgg cgacgaggaa cccgcccgtg cagccggccc acagggcgat ggccgccacc
      181 cacccggcgg gcagctggag ggcgaccacg cccatcaggg cgaatacgat cgcgcaggcg
      241 accgcggacc cgccaatggt caggaatggc cggcgcgacc ggacgtagat caaccccgcc
      301 ccaccacgag gtagtgtagg cagcagccgc aaacgatctt gtcgaacgag tgtgccggtg
      361 tggccatttg tggagggatg tcatggatgt aacggctgag agggccgaca tcgaccaggc
      421 tgtttcggga aaaaccgtcc ccacgatctt tgccgacgcc gccgagacct gggcggaccg
      481 gcccgcgctc cactggcgca cgaacgggga atggcaccag ctgacgtggc acgagtaccg
      541 agaccaggtc gcggcgatga ccatggccct gagggagctg ggcttcggcc gagaccagtt
      601 cggcctgatc atggcccgca acgtcccgga gcacgtgatc gccgacctcg ccctggtcca
      661 cgccggaggc gcggcgatca gtgtctacaa caccctggct cctgaacagg tggagtacat
      721 cgccaaccac tcggaggcca ccgtcgcgtt cgtggaggac gagggcttcc tggccaagtt
      781 cctcgccatt cgcgagtcga ccccgaggct gaggcacatc gtgctggtgc gcggcaaggc
      841 gccggaaggg gtcctggcgt gggacgacct catggcgaag ggccgcgcga cttacgaggc
      901 ccacccggac gcgttcaagg ccacgtggcg cgcggtcggg ccggaggaca cgatcagcct
      961 gatctacacg tccggaacga ccggcccgcc gaagggggtc atgtactcgc acaacaacgt
     1021 cgtctggacg tgcgagtcga ccacgcggcg gctcaagttc caggaggaga cgctcgtcag
     1081 ctacctccct ctcgcccatg tcgccgagcg cttcacctcg cagtggaacg gcatcaacgc
     1141 cgggcacgag gtgtacttct gcccggatcc aaacgagcta ctggcctacc tggtcgaggc
     1201 caggccgact gtgttcgtgg gcgtgccgcg ggtgtgggag aagctcatgt ccggcatcca
     1261 ggctggaatc gccgccgagc cggacgagac gaagcgccag atggcggccg gcgcgatcgc
     1321 cgcggcccag caggggtacc ggctccgccg ggacggccag gaggtgcccg ccgagctggc
     1381 ggctgtcaca gaacgagcgg cgcccctgtt ccagatgctc ctcggcaagg tcggcctcga
     1441 caagtgtcgc ctcgcgatca caagcacggc gccgtgccgc cccgaggtcc acgagttctg
     1501 ggcggccctc ggcctgccgc tgtacgaggt ctggggcatg agcgagctca cgggtccggc
     1561 caccgcggtt ccgcccgagc accacaaggc gccttcgatc ggcacagcgc tcccgggagt
     1621 ggaggtcaag ctcggcgagg acggcgagat actggtccgc ggcggcaacg tcatggtcgg
     1681 ctacttccgc gacccggtca aaaccgccga gacgatcgac aaggacggct gggtgcacag
     1741 cggcgacatc gccgagctca tgccggacgg ccagctgaag atcgtcgacc gcaagaagga
     1801 gctgatcatc acctcggcgg gcaagaacat ctcgccgtcg aacctggagg cgctggcgaa
     1861 gtcgagcccg atcatcggcc aggcggtggc cgtcggcgat tcgcgcaact tcatctcggt
     1921 gctcgtcgtg ctcgacccgc aggtcgcgcc cttgtgggcg aagcgacagg gcctcgagga
     1981 gatggcgctc gccgacctgg ccgagcatcc gaagatcgtg gacgaggtga ggcgcgccct
     2041 cacggtcgcc aacacgcacc tgtcgcgcgt ggagcagttc aagcggttca cgatcctgcc
     2101 cgcggagtgg tcgccggaga gcgaggagct gaccccgacc ctgaagctca agcggcgcgt
     2161 gatcgagtcg aagtactccc cgcagatcga ggccatgtac gcgaccccgg ccggtgggca
     2221 ctccgtcgat ccgcagaggg
//
LOCUS       DATGJT010000693         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1443983, whole genome shotgun sequence.
ACCESSION   DATGJT010000693 DATGJT010000000
VERSION     DATGJT010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443983"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VKX24_12030"
     CDS             <1..447
                     /locus_tag="VKX24_12030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09258.1"
                     /translation="DAVSYGDMSGKRLNGPIVGSIATTSGNGYYMVGSDGGIFSFGDA
                     VFHGSMGAVRLNAPVESLVPDASGGGYWLVASDGGIFAFGDAPFRGSMGGTPLNKPVT
                     GMVRYGSGYLMVGQDGGIFDFSDRPFAGSLGAHPPARPIVSVATRG"
     gene            451..>2183
                     /locus_tag="VKX24_12035"
     CDS             451..>2183
                     /locus_tag="VKX24_12035"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HLJ09259.1"
                     /translation="MRTRLFRLTVAVAALSAGLASALAGPAVRAAVDPPAATPSFTFG
                     AAGDMGAAKSAATTLTNLGQAGTSFFLHLGDFSYGETIPGGTSTNPDPAAAEAENWCN
                     FVKTKANLPSGYPYELVSGGHVSQAISGQDGPLEDYTACLPDQLHSTVAPGSEYGKDY
                     YFDYPPAAPLARVFMVAAGETFTNGGAPDDYSAGSANLAWLSGAIDDARAHGIPWVFV
                     GMAFNCVTAGDKHCEIGADLFNLLVAKKVDLVLQGHTHTYQRSKQLALGPACPSVTNT
                     AYDADCVVNDGSTGSYTKGAGYVLVISGTGGDSNGSVSTSDPDSQYFAKLNGASYGFT
                     KFTVSATQLSAQFVAAVGTFSDSFTIGGSGGTPGDQPPTAAGASLSTPQDTALPVTLQ
                     ATDPDNCGGVAFTVVTPPAHGTLDPLSAPTCTAGTPNRISATTTYRPTAGFNGTDSFS
                     YKANDGALDSNTATVTVTVGTPPPPSPGITFRSASSAQNPTSTTLTINRPAGVIAGDV
                     MVAGIGIRGAPSITAPAGWSLVRTDAAGTYTTQAIYDRVVTASEPASYTWSFSGSVPA
                     AGGISDYQGVNT"
BASE COUNT          324 a          841 c          717 g          301 t
ORIGIN      
        1 gacgccgtct cctacggcga catgtccggc aagcgcctca acgggccgat cgtcgggtcg
       61 atcgccacca cgtcgggcaa cggctactac atggtcggct ccgacggcgg gatcttctcc
      121 ttcggcgacg ccgtcttcca cggctccatg ggcgccgtgc ggctgaacgc cccggtggag
      181 tcgctggtgc ccgacgccag cggcggcggc tactggctgg tggcgtcgga cggcgggatc
      241 ttcgccttcg gcgatgcgcc gttccggggt tcgatgggcg gcacgccgct caacaagccg
      301 gtgaccggca tggtccgcta cgggtcgggc tacctgatgg tcggccagga cggcggcatc
      361 ttcgacttct ccgaccggcc cttcgcggga tcgctcgggg cccatccgcc ggcccggccg
      421 atcgtgtccg tggccacgcg gggctgagcg gtgcggacac gactgttccg cctcaccgtc
      481 gccgtcgccg ccctctccgc cgggctggcc tcggcgctgg ccggcccggc cgtccgggcc
      541 gccgtcgatc ccccggccgc cacgccgtcg ttcaccttcg gcgccgccgg cgacatgggg
      601 gcggccaagt ccgccgccac cacgctgacc aacctcggcc aggccggcac gtcgttcttc
      661 ctccacctcg gcgacttctc ctacggcgag acgatccccg gcggcacgag caccaacccg
      721 gacccggcgg cggccgaggc ggaaaactgg tgcaacttcg tcaagacgaa ggccaacctg
      781 cccagcggct acccctacga gctcgtctcc ggcggccacg tcagccaggc catctcgggc
      841 caggacggcc cgctcgagga ttacacggcc tgcctgcccg accagctcca ctccacggtc
      901 gccccgggga gcgagtacgg gaaggactat tacttcgact acccgccggc cgcgccgctg
      961 gcccgggtgt tcatggtcgc ggccggcgag acgttcacca acggtggagc gcccgacgac
     1021 tactcggccg ggagcgccaa tctcgcctgg ctgtccgggg ccatcgacga cgcccgggcc
     1081 cacggcatac cgtgggtctt cgtcgggatg gccttcaact gcgtgaccgc cggcgacaag
     1141 cactgcgaga tcggcgccga tctcttcaac ctgctggtgg ccaagaaggt cgacctcgtc
     1201 ctgcagggcc acacccacac ctaccagcgc agcaagcagc tggccctcgg gcccgcctgc
     1261 ccgtcggtca ccaacacggc ctacgacgcc gactgcgtcg tcaacgacgg ttccaccggg
     1321 agctacacca agggcgccgg atacgtgctc gtgatcagcg ggacgggcgg cgacagcaac
     1381 ggctcggtga gtacgtcgga ccccgactcc cagtacttcg ccaagctcaa cggcgccagc
     1441 tatgggttca ccaagttcac ggtgagcgcc acccagctga gcgcccagtt cgtcgccgcc
     1501 gtcggcacgt tcagcgattc gttcaccatc ggcggatcgg gcgggacgcc gggcgaccag
     1561 ccgccaacgg ccgccggggc gtcgctgtcc acgccccagg acacggcgtt gccggtcacg
     1621 ctgcaggcga cggacccgga caactgcggc ggcgtggcgt tcaccgtggt gacgccgccg
     1681 gcgcacggaa cgctggaccc gctgtccgcc ccgacctgca ccgcgggaac gccgaaccgg
     1741 atcagcgcca cgacgacgta ccgcccgacg gccggcttca acggcaccga cagcttctcc
     1801 tacaaggcca acgacggcgc gctcgactcg aacaccgcca cggtgacggt cacggtggga
     1861 acgccgccgc ctccgtcgcc ggggatcacc ttccggtcgg ccagctccgc tcagaacccg
     1921 acgtccacca ccctgacgat caaccggccg gccggcgtga tcgccggtga cgtcatggtg
     1981 gccggaatcg ggatccgggg ggcgccgtcg atcaccgccc cggcgggctg gagcctggtc
     2041 cggaccgacg ccgccggcac gtacaccaca caggccatct acgaccgggt ggtgaccgcc
     2101 tccgaaccgg cgtcctacac gtggtccttc tccggctcgg tcccggccgc cggcggcatc
     2161 tccgactacc agggcgtgaa cac
//
LOCUS       DATGJT010000694         4350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_303339, whole genome shotgun sequence.
ACCESSION   DATGJT010000694 DATGJT010000000
VERSION     DATGJT010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4350
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303339"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..810)
                     /locus_tag="VKX24_12040"
     CDS             complement(115..810)
                     /locus_tag="VKX24_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013735705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ09260.1"
                     /translation="MSAVPEARVLVVDDEDSITDLVSTALRYVGFEVAVAANGRQALE
                     RAATFRPELVVLDVMLPDLDGFEVVRRLRADGLRVPIVFLTARDATEDKVAGLTIGGD
                     DYVTKPFSLEELVARVRAVLRRTAGGPEQSGRLQIADLELDEDSHQVWRAGQPVELTA
                     TEFKLLRYLMMNARRVLSKAQILDHVWNYDFGGDGSIVETYISYLRKKVDASEPRLIQ
                     TVRGVGYTLRPPG"
     gene            912..1613
                     /locus_tag="VKX24_12045"
     CDS             912..1613
                     /locus_tag="VKX24_12045"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HLJ09261.1"
                     /translation="MPAKLLKPRVLVAAVIVVVAAFAVAYFTLFDTGSPSKLTLQTKG
                     STAAVPTGDLAGTWTVADGSVAGYRVREKLAQLPAPSDAVGRTGAITGQVTITDQGGA
                     YQAGSANFTVDVSQLRSDQDKRDNKIRSIGLETAKFPQAAFAAAGPIAIPADAVQGKA
                     VRVQADGDLTLHGVTKRVTIPLDVQRDGAQVKVVGSYQFGWSDFGMTAPSLPPFVSVT
                     GNPTLEFELRLARQA"
     gene            complement(1666..2001)
                     /locus_tag="VKX24_12050"
                     /pseudo
     CDS             complement(1666..2001)
                     /locus_tag="VKX24_12050"
                     /inference="COORDINATES: protein motif:HMM:NF022317.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2784 family protein"
     gene            complement(2091..3896)
                     /locus_tag="VKX24_12055"
     CDS             complement(2091..3896)
                     /locus_tag="VKX24_12055"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HLJ09262.1"
                     /translation="MTATIDIASRQRPGLDPAIAADIEKFERLLAQHEAGELEEDRWR
                     VFRLANGIYGQRQGGTNQMVRVKVPYGSLRPEQLEMLGHIAREYSRGWGHITTRQNVQ
                     FHFVALQRIPALLRDLGSVGLTTREACGDTVRNVAGCHLAGACPFEVLDISPWAEATF
                     RHFLRHPYAQRLPRKFKINFSGCATDCGQAMFNDVGVVAVTRARADGSTEAGFRVFVA
                     GGLGATPHPALALEEFTPREELLATVEAILRVFDHAGNRDNKLRARMKWLVDTLGIEE
                     LRARVLKERRLLLAAVGWPGGVPAVVEEQGDVPAGVSPGAFEPGPARPGAVPVAIGAA
                     GTPYRRWERANVVRGVARGTVSAYAHCRLGDVTAEQFDGLAALQRRLGAEVRVTNRQN
                     VVFRALAESQLPELYAGLEALGLARPGAELARDVVSCPGADTCNLAVTQSRGLASAID
                     TALEEAGLAEVGGVRVNISGCSNSCGQHHTADIGFFGIERRAHGRSAPGYQLLLGGHL
                     GDASVEFGRKALRLPAKACAEATVRLVGRFAAEREATETFPAWLARAGGVPAVAADLA
                     DLAEFPAPADRPGWYVDYDEAGPFTAEIGLSECAG"
     gene            complement(3893..>4350)
                     /locus_tag="VKX24_12060"
     CDS             complement(3893..>4350)
                     /locus_tag="VKX24_12060"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HLJ09263.1"
                     /translation="HEDGDLAGAFLAVAATGDAAETARVFAEAERERVLLNAVDDPAR
                     CHFAVPAVLRRGDLVVAVSTGGRAPGYAGRLRDELARAVGAEHGTLLDLVASLREELP
                     AEWAANWRRALDHDLLGLVRAGRAGDAHALLRAALLADEHQDEYREAVA"
BASE COUNT          599 a         1582 c         1636 g          533 t
ORIGIN      
        1 gccgggcgtg gaggtagtcg gccagcgcct tgtagatccc ggcgctgctg gcgccgagcc
       61 cgacgacggt gagggccagg agccccgcca ccagccgggc ccgcagggac cgcatcagcc
      121 cggtggccgc agcgtgtagc cgaccccccg cacggtctgg atcagccgtg gctcggaggc
      181 gtcgaccttc ttgcgcagat aggagatgta ggtctccacg atgctgccgt cgccgccgaa
      241 gtcgtagttc cagacgtggt cgaggatctg ggccttcgac agcacccgcc gggcgttcat
      301 catcaggtag cggagcagct tgaactccgt ggccgtgagc tcgacgggct ggccggcccg
      361 ccagacctgg tggctgtcct cgtcgagctc gaggtcggcg atctgcagcc ggccgctctg
      421 ctccggcccg cccgccgtcc gccgcagcac ggcccgcacc cgggccacga gctcttcgag
      481 ggagaagggc ttggtgacgt agtcgtcgcc gccgatggtg agcccggcca ccttgtcctc
      541 ggtggcgtcg cgggcggtga ggaagacgat cggcacccgc aggccgtcgg cccgcagccg
      601 gcggacgacc tcgaacccgt cgaggtcggg caacatcacg tcgagcacga cgagctccgg
      661 gcggaacgtc gccgcccgct ccagcgcctg gcgcccgttg gcggccacgg cgacctcgaa
      721 gcccacgtag cgcaacgcgg tggagacgag atcggtgatg ctgtcctcgt cgtcgacgac
      781 gagcaccctc gcttccggca cggcgctcat tctcccagtc cagcgggcgc ggctgggaaa
      841 cctctgggag ttcgctgggg aagtgcccga accccgttgg ggggcgatcc tcctggggta
      901 ccttcggacc catgccggca aagctcctga agccccgcgt cctggtggcg gcggtgatcg
      961 tcgtcgtggc cgcgttcgcc gtcgcctact tcacgctgtt cgacaccggc tcgccgtcga
     1021 agctgacgct gcagacgaag ggctcgacgg ccgccgtccc caccggagac ctggccggga
     1081 cgtggaccgt ggccgacggg tcggtggccg gctaccgggt gcgggagaag ctggcccagc
     1141 tcccggcccc gagcgacgcc gtcggccgga ccggggcgat caccggccag gtgacgatca
     1201 ccgaccaggg cggcgcctac caggccggca gtgccaactt caccgtcgac gtgtcgcagc
     1261 tccggagcga ccaggacaag cgggacaaca agatccgctc gatcgggctc gagacggcga
     1321 agttccccca ggccgccttc gccgccgccg gccccatcgc cattcccgcc gacgccgtgc
     1381 aaggcaaggc ggtgcgggtc caggccgacg gcgacctcac gctccacggt gtgacgaagc
     1441 gggtgacgat cccgctcgac gtccagcggg acggcgctca ggtcaaggtc gtggggagct
     1501 accagttcgg ctggtccgac ttcgggatga cggcgccgag cctcccgccg ttcgtgtcgg
     1561 tgacgggcaa cccgacgctg gagttcgagc tccgcctggc caggcaagcc tgacccagcc
     1621 ggtcagcacg atcgccgccc ctgccgccac gacgtagggc gtgagccatt cggggaacag
     1681 ggcgccccgg acgtaatggc gcaggaaccc gtcggccgcc ggggcctgcc cggccccggc
     1741 ccggagcgac ccctccagcg acgtcagcgg gcagtcgtag cggaaggtga cggcgccggc
     1801 cgcccaggcc acgagcgcca ggtgggcggc caggagccag cgccgccgcc agcgccaggc
     1861 cgcccatccg ccgaagacca ggacggccag atagacgaag tgcagcccga cgacgaggtc
     1921 ggccagcgcg ccatagacgc ccgccacggc tcgacggtag cgcccggggg acgtcggccg
     1981 gagcgggccc gtccagagca cgacctgtag tgatcagggc cctcaccggg ccctcggcac
     2041 gaccggtcgt gctcaggcac agcgcggcca tggccgaccc ccgggcccga tcagccggcg
     2101 cactcgctca ggccgatctc ggcggtgaac gggccggcct cgtcgtagtc gacgtaccag
     2161 cccgggcggt cggccggtgc cgggaactcg gccaggtcgg cgaggtcggc ggccaccgcg
     2221 gggacgccgc cggcccgggc cagccaggcg gggaacgtct cggtcgcctc ccgttcggcg
     2281 gcgaaacggc cgaccaggcg gacggtggcc tcggcgcagg ccttggccgg cagccgcagc
     2341 gccttgcgac cgaactccac cgaggcgtcg ccgaggtggc cgccgagcag gagctggtag
     2401 cccggggccg accggccgtg ggcccgccgc tcgatgccga agaagccgat gtcggcggtg
     2461 tgatgctggc cgcaggagtt ggagcagccg gagatgttga cccgcacgcc gccgacctcg
     2521 gccaggccgg cctcctccag cgcggtgtcg atggccgacg ccagcccccg ggactgcgtc
     2581 acggccaggt tgcaggtgtc ggcgcccggg cagctgacga cgtcgcgggc cagctcggcg
     2641 ccgggccggg cgaggccgag cgcctccagc ccggcgtaga gctcgggcag ctgggattcg
     2701 gccagggccc ggaacacgac gttctgccgg ttggtcaccc gcacttcggc gccgaggcgg
     2761 cgctgcaggg cggcgaggcc gtcgaactgc tcggccgtca cgtcaccgag gcggcagtgg
     2821 gcgtaggccg acaccgtgcc ccgggccacg ccccgcacga cgttggcccg ctcccagcgc
     2881 cggtacgggg tgccggcggc gccgatggcg accggaacgg cgccgggccg ggccgggccc
     2941 ggctcgaagg cgccgggcga gacgccggcc gggacgtcgc cctgctcctc gaccacggcc
     3001 gggaccccgc ccggccagcc gacggcggcc agcagcaggc gccgctcctt cagcacccgg
     3061 gcccgcagct cctcgatgcc cagcgtgtcg acgagccact tcatgcgggc ccggagcttg
     3121 ttgtcccggt tgccggcgtg gtcgaagacg cgcaggatcg cctcgacggt ggccagcagc
     3181 tcctcccggg gcgtgaactc ctccagcgcc agggccgggt ggggcgtggc cccgagtccg
     3241 ccggccacga agacccggaa cccggcttcc gtgctgccgt cggcgcgggc gcgggtgacg
     3301 gccaccacgc cgacgtcgtt gaacatcgcc tgtccgcagt cggtggcgca gccggagaag
     3361 ttgatcttga acttgcgggg gagacgctgc gcgtaggggt ggcggaggaa gtggcggaag
     3421 gtcgcttcgg cccaggggct gatgtcgagc acctcgaagg ggcaggcgcc ggccaggtgg
     3481 cagccggcca cgttgcggac ggtgtcgccg caggcctccc gcgtcgtgag cccgacggag
     3541 ccgaggtccc gcaggagggc cgggatccgt tgcagggcca cgaagtggaa ctgcacgttc
     3601 tggcgggtgg tgatgtggcc ccagccccgg gagtactccc gggcgatgtg gccgagcatc
     3661 tcgagctgct ccggacgcag cgagccgtag gggaccttca cccgcaccat ctggttggtc
     3721 ccgccctggc gctggccgta gatcccgttg gccagacgga agacacgcca gcggtcctcc
     3781 tccagctcgc cggcctcgtg ctgcgccagc agccgctcga acttctcgat gtcggcggcg
     3841 atggccgggt cgagcccggg ccgctgtcgc gaggcgatgt cgatggtcgc cgtcatgcca
     3901 cggcctcccg gtactcgtcc tggtgctcgt cggcgaggag cgccgcccgg agcagcgcat
     3961 gggcatcacc cgcccgtccc gcccggacga ggccgaggag atcgtggtcc agggcccggc
     4021 gccagttggc cgcccactcc gccgggagct cctcccgcag ggaggcgacg aggtcgagca
     4081 gcgttccgtg ctcggcgccg acggcgcggg cgagttcgtc gcgcaggcgg ccggcgtagc
     4141 ccggcgcccg gccgccggtc gagaccgcca ccacgaggtc gccccggcgc agcacggcgg
     4201 gaacggcgaa gtggcagcgg gcgggatcgt cgacggcgtt gagcagcacg cgctcccgct
     4261 cggcctcggc gaagacgcgg gcggtctcgg cggcgtcgcc ggtggcggcc acggccagga
     4321 aggcgccggc gaggtcgccg tcctcgtggg
//
LOCUS       DATGJT010000695         2995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_822744, whole genome shotgun sequence.
ACCESSION   DATGJT010000695 DATGJT010000000
VERSION     DATGJT010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_822744"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /locus_tag="VKX24_12065"
     CDS             <1..905
                     /locus_tag="VKX24_12065"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HLJ09264.1"
                     /translation="RGTESGLGCPDWPRCHGRWIPPLQYHPIIEYSHRATASVVIWLT
                     VALLVVALRNRRRLTPRAFTLAVIPLPIVLSQAILGAVVVHLDLKAESVVAHLLVAMT
                     LVAVLISLVVEVEPAGSPLAPATSGAGAPDFSGVDRRFAGLASAVAGSALFLMLLGSY
                     VSGRHAGLAFRTWPFFNGHVLPAVHGLLPDLNFAHRFVAAVVAVAIFALAGLVRRRPQ
                     AAPVTAMVRAAAALIGVEILLGAGNVWTRLSPVTRTAHLATAALIWGALFTAARLAWR
                     LPAGQPAARPAASGPGAGSLVGAR"
     gene            902..1834
                     /locus_tag="VKX24_12070"
     CDS             902..1834
                     /locus_tag="VKX24_12070"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018686123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HLJ09265.1"
                     /translation="MSAADASALGPPADANAAVGWRSRLGAYVGLTKPRIIELLLVTT
                     VPAMVLADRGVPSPWLVLTVLFGGTLAAAGANTINCVCDRDIDEKMKRTHGRPLPLGL
                     VTPEQALRFGIGLEIFAFIWLWATTNLLAATLAVSATAFYVFVYTLWLKRTTAQNIVI
                     GGAAGAVPVLVGWAAVTGRVGLPAWVMFAIIFMWTPPHFWALALKYRDDYAAAGVPML
                     PVVAGPKAAARQILAYSVVLVGVTLTLCPAAQMGPVYLVAALVLGARFLQVAGQLNRD
                     RSAKAALRLFSYSITYLGLLFAAIAVDAVVKHRP"
     gene            1800..2384
                     /locus_tag="VKX24_12075"
     CDS             1800..2384
                     /locus_tag="VKX24_12075"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HLJ09266.1"
                     /translation="MPSTLSSSTAPEAPPPAPARDRGRTVRYVVFALIVLCVPISLLV
                     RRAVNPQHRVDPLNRGPAPTFELRSVEGKTVSLASFRGQPSIVLFWGAWCEQCTLELP
                     RLVELHRRYPQVRIVGILYKESPDVGKAAAEQAGIDWPTLVDPDGRVAAEYGVEGAPA
                     NFFIRPDGTIAGDLIGPVFVGNLEKEFEKIVRPG"
     gene            complement(2391..>2995)
                     /locus_tag="VKX24_12080"
     CDS             complement(2391..>2995)
                     /locus_tag="VKX24_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011436093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ09267.1"
                     /translation="DLYAGYRDPLDFLVPGVLGLAVMSAAMVSLGIATGFERRYGVLK
                     RLGTTPLGRSGLLTAKTLTVVAVEVIQAVILVVTALLLGWSPAGGYATALGVMVLGTI
                     AFSGLGLLMAGTLRAEGTLAVANGAYLLLLVLGGMAYPLTKLPLALQDVARVLPAAPM
                     TDCLRGALTGSGIPGARLSILIGWAVLAPLLAARSFRWEE"
BASE COUNT          350 a         1152 c         1052 g          441 t
ORIGIN      
        1 tccggggcac ggaatcgggt ctgggctgcc ccgactggcc gcgctgccac ggccggtgga
       61 tcccgccgct ccagtaccac ccgatcatcg agtactccca ccgggccacc gcctcggtcg
      121 tgatctggct gacggtggcg ctgctggtgg tggccctgcg caaccgccgc cggctgaccc
      181 cccgggcctt caccctggcg gtgatcccgc tgccgatcgt gctctcgcag gcgatcctgg
      241 gcgccgtcgt cgtccacctc gacctgaagg ccgagtcggt ggtggcccac ctcctcgtgg
      301 ccatgacgtt ggtggcggtg ctcatctccc tcgtggtcga ggtggagccg gccggatcgc
      361 cgctggcccc ggcgacgtcg ggcgccggcg cccccgactt ctccggcgtc gaccgccgct
      421 tcgccggcct ggcctcggcc gtggccggct cggcgctgtt cctgatgctg ctcggctcct
      481 acgtcagcgg ccgccacgcc ggcctggcct tccgcacctg gccgttcttc aacgggcacg
      541 tcctgcccgc cgtccacggc ctgctccccg acctcaactt cgcccaccgg ttcgtggccg
      601 ccgtggtcgc cgtggccatc ttcgccctgg ccgggctcgt ccgccgccgg ccccaggcgg
      661 cgccggtgac ggccatggtc cgggccgccg ccgccctcat cggcgtggag atcctcctcg
      721 gcgccggcaa cgtctggacc cggctgtctc cggtgacccg gaccgcccat ctggcgaccg
      781 ccgccctgat ctggggggcg ctgttcaccg ccgcccggct ggcctggcgg ctcccggccg
      841 gtcagcccgc ggcccgtccg gcggcttcgg gtcccggtgc gggcagcctg gtgggcgccc
      901 ggtgagcgcc gccgacgcca gcgccctcgg ccccccggcc gacgccaacg ccgccgtcgg
      961 ctggcgcagc cggctcgggg cctacgtcgg gctcaccaag ccccgcatca tcgagctgct
     1021 gctggtgaca accgtgccgg ccatggtgct ggccgaccgg ggtgtgccgt cgccctggct
     1081 ggtgctgacc gtgctgttcg gcgggacgct ggcggccgcc ggcgccaaca ccatcaactg
     1141 cgtctgtgac cgcgacatcg acgagaagat gaagcggacc cacggccggc cgctgccgct
     1201 cggcctcgtc accccggagc aggcgctgcg gttcgggatc gggctggaga tcttcgcctt
     1261 catctggctg tgggccacca ccaacctgct ggcggccacg ctggccgtca gcgccaccgc
     1321 cttctacgtc ttcgtctaca cgctgtggct caagaggacg acggcgcaga acatcgtcat
     1381 cggcggagcc gccggagcgg tgccggtgct ggtcggctgg gcggcggtca ccggccgggt
     1441 cggcctcccg gcctgggtga tgttcgccat catcttcatg tggacgccgc cccacttctg
     1501 ggcgctggcg ctcaagtacc gcgacgacta cgccgccgcc ggcgtcccca tgctgccggt
     1561 ggtggccggc cccaaggccg ccgcccgcca gatcctggcc tactccgtcg tcctggtcgg
     1621 cgtgacgctc acgctgtgcc cggcggccca gatggggccg gtctacctcg tggccgccct
     1681 cgtcctcggg gcccggttcc tgcaggtcgc cggacagctc aaccgcgacc ggtcggccaa
     1741 ggccgccctc cggctgttct cgtactccat cacctacctc ggtctgctct tcgccgccat
     1801 tgccgtcgac gctgtcgtca agcaccgccc ctgaggcgcc gccgcccgct ccggcccgag
     1861 accgggggcg gacggtccgc tacgtcgtct tcgccctcat cgtgctgtgc gtgccgatca
     1921 gcctcctcgt gcggcgggcc gtcaatcccc agcaccgggt cgacccgctc aaccggggcc
     1981 cggcgccgac cttcgagctg cgctccgtcg aggggaagac ggtgtcgctg gccagcttcc
     2041 ggggccagcc gtcgatcgtc ctcttctggg gcgcgtggtg cgagcagtgc accctggagc
     2101 tgccgcgcct cgtggagctg caccgccgct acccccaggt tcggatcgtc gggatcctct
     2161 acaaggagtc gcccgacgtc gggaaggccg ccgccgagca ggcgggcatc gactggccga
     2221 cgctggtcga cccggacggg cgggtggcgg ccgagtacgg cgtcgagggc gccccggcca
     2281 acttcttcat ccggcccgac ggcacgatcg ccggcgacct gatcggcccg gtgttcgtcg
     2341 ggaacctgga gaaggagttc gagaagatcg tccggccggg ctgagccgcc tcactcctcc
     2401 cagcggaagc tccgggcggc cagcaggggc gccaggaccg cccagccgat gaggatcgac
     2461 aggcgggcgc cggggatgcc ggagccggtc agggcccccc gcaggcagtc ggtcatcggg
     2521 gcggcgggca ggacccgggc gacgtcctgg agggccagcg gcagcttcgt cagcgggtag
     2581 gccatcccgc cgagcaccag cagcagcagg taggcgccgt tggccacggc aagcgtcccc
     2641 tcggcccgca gcgtcccggc catgaggagg ccgaggccgg agaaggcgat cgtgcccagc
     2701 accatcacgc cgagcgctgt ggcgtagccg ccggccggcg accagcccag cagcagggcg
     2761 gtgacgacga ggatcaccgc ctggatgacc tcgacggcca cgaccgtgag cgtcttggcc
     2821 gtgaggaggc cggagcggcc gagcggtgtc gtccccaacc gcttgaggac gccgtagcgc
     2881 cgttcgaacc ccgtggcgat cccgaggctg accatggccg ccgacatcac cgccaggccg
     2941 aggacgccgg gcaccaggaa gtccagcggg tccctgtagc cggcgtagag gtcga
//
LOCUS       DATGJT010000696         2591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_611271, whole genome shotgun sequence.
ACCESSION   DATGJT010000696 DATGJT010000000
VERSION     DATGJT010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611271"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VKX24_12085"
     CDS             complement(<1..311)
                     /locus_tag="VKX24_12085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007298277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ09268.1"
                     /translation="MGVYGEHVLPRIIDVCCGLKPLRPLRERVCEGLEGRVVEVGFGS
                     GLNLPYYPATVAAVAAVEPSDTGWNLAAKRRAATGMPVERTGLDGQSLPLDDASCDAA
                     LS"
     gene            complement(347..>2591)
                     /locus_tag="VKX24_12090"
     CDS             complement(347..>2591)
                     /locus_tag="VKX24_12090"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HLJ09269.1"
                     /translation="AYGNVEVFAHQKIPVPGSVATVDLRAQDPLATPSGATGLTALRL
                     VSGRYPSAAGEVAVTRGVAAAFDLRVGGTWTEGGQARRVVGLVENPRQLSEDFGVLAP
                     GALETPSTVTVRIAGTPRDFSSLQFPGRRPLDIVGNGSSRAAATATVLALATICLLFI
                     GLVAVAGFTVMAQRRQRALGMLGAVGASDRHVRMVMVANGAVLGAVAALVGAVTGVVG
                     WIALAPRLESVADHRIDRFALPWWAIGAAAGLAILTAVAAAWWPARSASRLPVVAALS
                     GRPPRPRPAQRSAAAGVLVLAGGLLALAFSNQRQNHPNPLLIIAGTVATTLGALLFAP
                     LAVRALGAVAGRAPVAARLSLRNLARYQARTGAALGAIALVVGIAATIAVSARSADAD
                     AARAAGAGNLPANELVVHLTEDVGGPLTAVPADQMQTLQGRVTDIAASFHSTDVVELD
                     GAAMSAAPSSAGNPGLTKGGNGHVAVSVGDAPPPAALGRVTPVENGFRMDHVIPLYVA
                     TPAVLAHYGINPADVDPTADVLSSEPGLAGFQVISGRQNIEHPKIQAVALPRYTSDPN
                     SLITAQAVRTLGVQVLPAGWLIRSGHALTAAEVDAARRVAAAAGLTIETRSAPHSLTA
                     LGRYATGVAVLVVLGVLAMVIGLLRTETAGDLRTLTAAGAGRRTRRALTATTAGALAL
                     LGAVLGTAGAYLALVAWHRSDLGTLRSVPVVNLAVILVGLPVVAVAAAWLLAGREPAA
                     ISRRPLE"
BASE COUNT          353 a          877 c         1096 g          265 t
ORIGIN      
        1 gagagggcgg cgtcgcagct ggcgtcgtcc agcggcaggg actgcccgtc gaggcccgtc
       61 cgctccaccg gcatgccggt ggccgcccgc cgcttggcgg ccaggttcca gccggtgtcg
      121 gacggttcga cggcggcgac ggcggcgacc gtcgccgggt agtacgggag gttcagcccc
      181 gagccgaacc ccacctcgac cacccggccc tcgaggccct cgcacacccg ctcccggagc
      241 gggcggagcg gtttgaggcc gcagcacacg tcgatgatcc ggggcaggac gtgttcgccg
      301 tagacgccca tgacctcgag gctaggccgg gcgccccggc cggccgctac tccagcggcc
      361 gccggctgat ggcggccggt tcccggccgg cgaggagcca ggcggcggcg acggccacca
      421 ccgggaggcc gaccaggatg acggccaggt tcacgacggg aacggagcgg agggtgccga
      481 ggtcgctgcg gtgccaggcg acgagggcga ggtaggcgcc ggcggtgccg agaacggccc
      541 cgagcagggc cagcgccccg gcggtggtgg cggtgagagc ccggcgggtc cggcggccgg
      601 cgccggcggc ggtcagcgtc cgcagatcgc cggccgtctc cgtgcggagc aggccgatca
      661 ccatggccag cacgccgagg acgacgagga cggcgacgcc ggtggcatac cggccgagcg
      721 cggtcagcga atgcggcgcc gatctcgttt cgatggtcag gcccgcggcg gcggcgaccc
      781 gccgggcggc gtcgacctcg gcggcggtca gcgcgtggcc ggagcggatg agccagccgg
      841 cggggagcac ctggaccccg agcgtccgga cggcctgggc ggtgatcagc gaattgggat
      901 cggaggtgta gcgggggagg gcgacggcct ggatcttcgg atgttcgatg ttctggcgcc
      961 cggagatgac ctggaagccg gcgaggccgg gctccgagct gaggacgtcg gcggtgggat
     1021 cgacatcggc ggggttgatg ccgtagtggg ccaggaccgc cggggtggcg acgtagagcg
     1081 ggatgacgtg gtccatcctg aacccgttct ccaccggcgt cacccggccg agggccgccg
     1141 gcggcggggc gtcgcccacg gagacggcga cgtgcccgtt gccgcccttg gtcagcccgg
     1201 ggttgccggc gctcgacggc gccgccgaca tcgccgcgcc gtcgagctcg accacatcgg
     1261 tggaatggaa cgacgccgcg atgtcggtga cgcggccctg gagggtctgc atctggtcgg
     1321 ccggcaccgc cgtgagcggg ccgccgacgt cctcggtgag atggacgacc agctcgttgg
     1381 ccgggaggtt cccggcgccg gcggcccggg cggcgtcggc gtcggcggag cgggcgctga
     1441 cggcgatggt ggcggcgatc ccgacgacga gcgcgatggc gccgagcgcc gcaccggtcc
     1501 gggcctgata gcgggcgagg ttgcgcagcg acagccgggc cgccaccgga gcgcggccgg
     1561 cgacggcgcc gagagcccgc acggcgagcg gggcgaacag cagcgccccc agcgtcgtgg
     1621 ccacggtgcc ggcgatgatg agcagcgggt tcgggtggtt ctgccgctgg ttcgagaagg
     1681 ccagagcgag caggccgccg gcgaggacga ggacgccggc ggcggcggag cgttgcgccg
     1741 gccgggggcg gggcgggcgc ccggagaggg cggcgacgac cgggagccgg gaggcggacc
     1801 gggccggcca ccaggcggcg gcgacggcgg tgaggatcgc caggcccgcc gcggcgccga
     1861 tggcccacca cggcagggcg aagcggtcga tgcggtggtc ggcgacggac tccagccggg
     1921 gggcgagcgc gatccagccg acgacgccgg tgacggctcc gacgagcgcg gcgacggcgc
     1981 cgagcaccgc gccgttggcc accatgacca tccggacgtg gcggtcggag gcgccgaccg
     2041 ctccgagcat cccgagagcc cgctggcggc gctgggccat gacggtgaag ccggccacgg
     2101 cgacgaggcc gatgaaaagc aggcagatcg tggccagggc caggacggtg gccgtggcgg
     2161 cggcgcggct cgagccgttg ccgacgatgt cgagggggcg gcggccggga aactgcagcg
     2221 atgagaagtc gcggggcgtg ccggcgatgc ggacggtcac ggtggacggg gtctcgagcg
     2281 cgccgggggc gaggacgccg aagtcctccg acagctgccg cgggttctct accagcccga
     2341 cgacgcgccg ggcctgcccg ccttccgtcc aggtgccgcc gacgcgcagg tcgaaggcgg
     2401 cggccacacc gcgggtgacg gccacctcgc cagcggcgga ggggtagcgg ccggacacca
     2461 gccgcaacgc ggtcagcccg gtggcgccgg acggcgtggc cagggggtcc tgggcccgaa
     2521 ggtcgacggt ggccaccgaa ccgggcacgg ggatcttctg gtgggcgaac acctcgacgt
     2581 tcccgtacgc c
//
LOCUS       DATGJT010000697         2730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_408276, whole genome shotgun sequence.
ACCESSION   DATGJT010000697 DATGJT010000000
VERSION     DATGJT010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408276"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1076
                     /locus_tag="VKX24_12095"
     CDS             <1..1076
                     /locus_tag="VKX24_12095"
                     /inference="COORDINATES: protein motif:HMM:NF016047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell wall-binding repeat-containing protein"
                     /protein_id="HLJ09270.1"
                     /translation="GTDGSTPSLGGLPNWVPGAGDEAGAQADCGDTSFTGGPVELSQW
                     TTSVDNDIVCGTPLDQISGNDAVATSIAISQQEFPSTGSAKAVVLARSDFFSDALAGG
                     PLAAQVGGPLLITPGAAISPSIDPRVENEIERVLPAGGTVYVLGGDLALSPMIDTTLE
                     GIGYQVVREAGADQYATAVDIAEQMGNPTTVFEATGLTFYDALSAVPAAIKEHAAILL
                     TDGSTQAPETALYLARFPIDTRYAIGGTFAAAGADPTATPVYGQDLFATSAAVATRFF
                     PGAAVFGAATAVDFPDALGGGVFMATGGRSGPLLLVDLTPPIAQSVAAYLATLKAKTP
                     GYVFGGTLAVPPAVVAALSAAVG"
     gene            complement(1119..2423)
                     /locus_tag="VKX24_12100"
     CDS             complement(1119..2423)
                     /locus_tag="VKX24_12100"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ09271.1"
                     /translation="MTRAIVYPIVAVVVALSLFRRLRRRRDRGQQARRTRTDNPLSGL
                     FGLIGMIAAREIRERLRGRLFRVVTIVLLLVVAAAVVIPTIHSSSKQTEHVGYVGTLS
                     STLREEIVSTARQTPVAIRLVGEPSLPAARAALRDGTVDLVVDGDRGLLVDTPISATD
                     SSTGAQFVHSLATNIGIDKALRAAGITSTQVAELRRAKALPVTSLQPAPKHSAARSTS
                     VIGVILVFIMLTQYLTWTLMGVMEEKASRVVEVLLATVRPVQLLGGKVLGIGLTALLQ
                     AGLVVAFALVLAKAVGSSLLTGTGPLVVVATLVWLVLGYAFYSWVYAAAGSMAERQDQ
                     VQSLALPLSIPLIFGYIVSLTSAGGNPSVLEKVLAFLPPTAPFAMPTLVAAGDTTPWA
                     FLVSAAISVVATIGMARVASAIYRRAVLRTGGRVRFRALFAR"
     gene            complement(2420..>2730)
                     /locus_tag="VKX24_12105"
     CDS             complement(2420..>2730)
                     /locus_tag="VKX24_12105"
                     /inference="COORDINATES: protein motif:HMM:NF025109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4162 domain-containing protein"
                     /protein_id="HLJ09272.1"
                     /translation="LCEAVTIIDHGRLVVSGTVDELASSGPQRLVVRVDGDRDGTWAK
                     ELGGVRISEIRGGEVRLVLDEATDSDQVLRAAQTAGRVTEFVFERRRLSEVFREATRG
                     "
BASE COUNT          402 a         1003 c          980 g          345 t
ORIGIN      
        1 gggggaccga cgggtcgacg ccgtcgctcg gcggcctgcc caactgggtg cccggggcgg
       61 gcgacgaggc cggcgcgcaa gccgactgcg gggacacctc cttcaccggg gggccggtcg
      121 agctgtccca gtggaccacc agcgtcgaca acgacatcgt ctgcggcacc ccgctcgacc
      181 agatctcggg caacgacgcc gtcgccacct cgatcgccat ctcgcagcag gagttcccga
      241 gcaccgggtc ggccaaggcc gtcgtgctcg cccgctccga cttcttctcc gacgccctgg
      301 ccggcggccc actggcggcg caggtcggcg gcccgctgct catcaccccg ggcgcggcca
      361 tcagcccctc gatcgacccc cgggtggaga acgagatcga gcgggtcctg ccggctggcg
      421 gcaccgtcta cgtcctcggt ggcgacctgg cgctcagccc gatgatcgac accaccctcg
      481 aggggatcgg ctaccaggtg gtccgggagg ccggggccga ccagtacgcc accgcggtcg
      541 acatcgccga gcagatgggc aaccccacga ccgttttcga ggcgaccggg ctcaccttct
      601 acgacgcgct ctccgcggtc ccggcggcca tcaaggagca cgcggccatc ctgctcaccg
      661 acggctcgac gcaggccccg gagaccgccc tgtatctggc ccggttcccg atcgacaccc
      721 gctacgcgat cgggggcacc ttcgccgccg ccggggccga cccgacggcc accccggtct
      781 acgggcagga cctgtttgcc acctcggccg cagtggccac tcggttcttc cccggcgcgg
      841 ccgtattcgg ggcggccacc gcggtcgact tccccgacgc cctcggcggc ggcgtgttca
      901 tggcgacggg tggccggagc ggcccgctgc tcctcgtcga cctgactccg ccgatcgccc
      961 agagcgtcgc cgcctacctg gccaccctca aggcgaagac gcccggctac gtcttcgggg
     1021 ggaccctggc ggtcccgccg gcggtcgtcg ccgcgctgtc ggcggcggtc ggctaggccc
     1081 gagacccccc ggggtcgagc gggcacgccc tcggggcctc agcgggcgaa cagcgcccgg
     1141 aagcggaccc gcccaccggt gcggagcacc gcccggcggt agatcgccga ggcgacccgg
     1201 gccatgccga tggtggcgac gacactgatc gccgccgaga ccaggaaggc ccacggggtg
     1261 gtgtcgcccg cggccacgag ggtcggcatg gcgaagggcg ccgtcggcgg caggaaggcg
     1321 aggaccttct cgaggaccga cgggttcccg ccggcgctcg tcaaggagac gatgtacccg
     1381 aagatgagcg ggatgctgag cggcagggcg aggctctgga cctggtcctg gcgttcggcc
     1441 atcgagccgg cggccgcgta cacccagctg tagaaggcat agccgagcac cagccacacg
     1501 agggtggcga ccaccacgag aggccccgtg ccggtgagga gggaagagcc gacggccttg
     1561 gccagcacca gggcgaaggc caccaccagg ccggcctgca ggagagcggt gagcccgatg
     1621 ccgaggacct tgcccccgag gagctggacc ggccggaccg tcgccaggag gacctcgacc
     1681 acccggctgg ccttctcctc catgaccccc atcagggtcc aggtgaggta ctgggtgagc
     1741 atgatgaaga cgaggatcac cccgatcacc gaggtggagc gggcggcgct gtgcttcggg
     1801 gccggctgga ggctcgtgac cgggagcgcc ttcgcccgtc ggagctcggc cacctgggtc
     1861 gaggtgattc ccgcggcccg cagggccttg tcgatgccga tgttcgtggc gagcgagtgg
     1921 acgaactggg cgccggtcga gctgtcggtc gccgagatcg gcgtgtccac gaggagcccc
     1981 cggtcgccgt ccacgacgag gtcgaccgtc ccgtcccgca gggcggcccg cgccgccggg
     2041 agcgagggct cgcccacgag ccggatggcg accggggtct ggcgggccgt cgagacgatc
     2101 tcctcgcgca gggtggacga gagggtaccg acgtacccga cgtgctcggt ctgcttcgaa
     2161 ctcgaatgga tggtcgggat gacgacggct gctgcgacca cgagcagaag cacgatcgtg
     2221 accacgcgga agaggcggcc acggagccgc tcacggatct cccgggcggc gatcatcccg
     2281 atcagcccga agagaccgct caacgggttg tcggtccggg tcctccgtgc ttgttgacct
     2341 cggtcgcggc gccggcggag ccgccggaag agcgacaacg ccaccacgac ggcgacgatg
     2401 gggtagacga tcgccctcgt cacccccggg tcgcctcccg gaacacctcg gagagccggc
     2461 gccgctcgaa gacgaactcg gtgacgcggc cggcggtctg ggcagcccgg agcacctggt
     2521 cgctgtcggt ggcctcgtcg aggacgagcc gcacctcccc gcctcggatc tcggagatcc
     2581 ggactccccc cagctccttc gcccacgtgc cgtcccggtc gccgtccacc cggacgacca
     2641 ggcgctgcgg gccgctcgag gccagctcgt cgacggtccc ggacacgacc agccggccgt
     2701 ggtcgatgat cgtcaccgcc tcgcagaggt
//
LOCUS       DATGJT010000698         3730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_715885, whole genome shotgun sequence.
ACCESSION   DATGJT010000698 DATGJT010000000
VERSION     DATGJT010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_715885"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..1513)
                     /locus_tag="VKX24_12110"
     CDS             complement(23..1513)
                     /locus_tag="VKX24_12110"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003882313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HLJ09273.1"
                     /translation="MPIIDADRPLAFAPAVDLLAMLAAKEVSARELLDLYLARIADHD
                     PELRAVVTLDAEGASAAAAAADEARAAGDDRPLLGLPMTVKDGLETAGLRTTAGATEL
                     RDHVPAADAVAVARLRAAGAVIVGKTNLPAWASDIQSSNKVFGTTVNPWDRDRSPGGS
                     SGGSAAALAAGLTGLELGSDIGGSIRTPAAWCGLFGHKPTYGIVPTRGSLPPRPGARA
                     AMDMWVVGPLGRSAADVALALDVVAGPAGDDAVAWRLELPPPRHRDLASFRVALWLDD
                     PRCPVAAEVGHGLARAAEALAAAGARVVALAEAAAQAGLPAPSLAALTAPYQPLLQAA
                     LSAGLPDRFFAELVSTAEAAGPDDDAEMVRYARDVTARVRDWHAADEERHRIRAWWAQ
                     LFRTVDVVLAPAVLTVAIPHDHRRIPERRLVVDGAERRYWDLLAWASPASLAYLPATA
                     VPLGRTAGGLPVGAQAIGPHGEDRTTLAFAGHVETVLGGFSPPPGW"
     gene            1513..2712
                     /locus_tag="VKX24_12115"
     CDS             1513..2712
                     /locus_tag="VKX24_12115"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF016362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HLJ09274.1"
                     /translation="MLSHLILVGRVLQSLRPDSDSALAEGIPDAGRGPWYTHRVADDG
                     VGRQWGAAAPTPGGAAARTIRSPDDAEQVAAEWMRHLGFDDARCTGAGADGGVDVRSR
                     DAVAQVKAQLTPVGRPELQALYGVARSEGRAPLFFSLMTYTAAALGWADEVGMALFRF
                     DHAGLVEPVNAAAEELMAAAPGGAGGRPGTPRVAAWPVRLSDRAGRAAIARERRGLLF
                     AERVAFTGLGWLWVQLVRLDYTVETRRAVAHRATTLAFDLLSGAPFPRPGFEPTAPGA
                     DGAGAAPVGAGGPLAATMETTAVLRQITDAWEKLEAVTRPAAVERHRAVLGHLGVPPD
                     AVTVSPSAGERVLAPVFVGLLEHRRESRVVVCSGVTGARLPDLASHLTSRLPHALEEI
                     VSRVRRL"
     gene            2763..3044
                     /locus_tag="VKX24_12120"
     CDS             2763..3044
                     /locus_tag="VKX24_12120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09275.1"
                     /translation="MATQRTSFTKLQRDRAKKAKAAAKRERRLERAAEARNPTDDADG
                     FEASAEGPISAAELLHEIEVTHQRFEAKLISYEEFEEKKAELLSRLPID"
     gene            complement(3066..>3730)
                     /locus_tag="VKX24_12125"
     CDS             complement(3066..>3730)
                     /locus_tag="VKX24_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009322416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004559 - alpha-mannosidase activity
                     [Evidence IEA];
                     GO_process: GO:0006013 - mannose metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 38 C-terminal
                     domain-containing protein"
                     /protein_id="HLJ09276.1"
                     /translation="AFPVAVHAAAARFEIQFGHLARPTHANTPFDQARFEVCAQRWAD
                     LSEAGYGVALLNDCKYGYDVRGDTLRLSLLRAPTAPDPLCDRGRHRFTYALLPHGGDL
                     TPVIAAGYALGAPLAVRPDVRTSGPAALRPRDHSLVTVGDPGFVVETVKAADDGRGVI
                     LRGYEALGGRCRVRLRPGVPCTRAVRTDLLERDGDDIEVDGDGLALTVRPFELVTLRL
                     LP"
BASE COUNT          453 a         1395 c         1463 g          419 t
ORIGIN      
        1 cgccggtggg cccgtccccg cctcaccatc ccggcggggg cgaaaagccg cccagcaccg
       61 tctcgacgtg gccggcgaag gccagcgtgg tgcggtcctc gccgtggggc ccgatggcct
      121 gggcaccgac cggcaggccg ccggccgtcc ggccgagcgg caccgccgtg gccggcaggt
      181 aggccaggct ggcgggcgac gcccacgcca gcaggtccca gtagcggcgc tcggcgccgt
      241 cgacgaccag ccgccgctcg ggaatgcggc ggtggtcgtg ggggatggcg acggtgagga
      301 cggcgggggc gaggacgacg tcgaccgtcc ggaacagctg cgcccaccag gcccggatgc
      361 ggtggcgctc ctcgtcggcg gcgtgccagt cgcgcacccg ggcggtgacg tcccgggcgt
      421 agcggaccat ctcggcgtcg tcgtcgggcc ccgccgcctc ggccgtgctc accagctcgg
      481 cgaagaaccg gtcggggagc ccggccgaca gcgccgcctg gagcagcggc tggtaggggg
      541 cggtgagggc cgccagcgac ggcgccggga gcccggcctg cgccgccgcc tccgccagcg
      601 ccacgacccg ggcgccggcg gcggccagcg cctcggccgc ccgggccagc ccgtggccga
      661 cctcggcggc caccgggcag cgggggtcgt cgagccacag cgccacccgg aaggaggcga
      721 ggtcgcggtg gcggggtggc ggcagctcca gccgccaggc gacggcgtcg tccccggccg
      781 ggccggccac cacgtcgagg gccagggcga cgtcggccgc cgagcgcccg aggggcccga
      841 ccacccacat gtccatcgcc gcccgcgccc ccggccgggg tgggagggac ccccgcgtgg
      901 ggacgatccc gtaggtcggc ttgtggccga acagcccgca ccaggcggcg ggggtgcgga
      961 tcgacccgcc gatgtcgctg ccgagttcga gcccggtgag cccggcggcc agcgccgccg
     1021 ccgacccgcc cgacgacccg cccggggagc ggtcccggtc ccaggggttg accgtggtgc
     1081 cgaacacctt gttgctgctc tggatgtcgc tggcccacgc cggcaggttc gtcttgccga
     1141 cgatgaccgc ccccgccgcc cggagccggg ccacggccac ggcgtcggcg gcggggacgt
     1201 ggtcgcgcag ttccgtggcc ccggccgtcg tcctcagccc ggcggtctcg aggccgtcct
     1261 tcaccgtcat cggcaggccg agaaggggcc ggtcgtcgcc ggcggcccgg gcctcgtcgg
     1321 cggcggcggc cgccgccgac gccccttcgg cgtcgagggt caccaccgcc cggagttccg
     1381 ggtcgtggtc ggcgatgcgg gccaggtaga ggtcgagcag ctcccgggcc gacacctcct
     1441 tggcggccag catggccagc aggtcgacgg cgggggcgaa ggccagcggg cggtcggcgt
     1501 cgatgatcgg cattgctctc gcacctcatc ctcgtcggtc gcgtcctcca gagcctccga
     1561 ccggactcgg attcggcgct cgccgagggt atccccgacg ccggccgggg gccgtggtac
     1621 acccaccggg tggcggacga cggcgtgggg cggcagtggg gcgcggcggc gcccaccccg
     1681 gggggcgccg cggcccgcac gatccgttcc ccggacgacg ccgagcaggt ggccgcggag
     1741 tggatgcgcc acctcgggtt cgacgacgcc cgctgcaccg gcgccggggc tgacggcggc
     1801 gtcgacgtcc gcagccggga cgccgtggcc caggtcaagg cccagctcac cccggtcggg
     1861 cggccggagc tgcaggcgct ctacggcgtg gcccgcagcg agggccgggc gccgctgttc
     1921 ttcagcctga tgacctacac cgccgccgcc ctgggctggg ccgacgaggt cgggatggcg
     1981 ctgttccgct tcgaccacgc cggtctcgtc gagcccgtca acgccgccgc cgaggagctg
     2041 atggccgccg cccccggcgg cgccggaggg cggccgggga cgccccgggt ggcggcctgg
     2101 ccggtccggc tctccgaccg ggcgggacgg gcggccatcg cccgggaacg gcgggggctg
     2161 ctcttcgccg agcgggtggc gttcaccggc ctcgggtggc tctgggtcca gctcgtgcgg
     2221 ctcgactaca ccgtggaaac ccgccgggcc gtggcccacc gggccaccac gctggccttc
     2281 gacctcctga gcggcgcgcc gttcccccgg ccgggattcg agccgacggc ccccggcgcc
     2341 gacggcgccg gggcggcgcc ggttggcgcc ggcggcccgc ttgccgccac catggagacg
     2401 accgccgtcc tccggcagat caccgacgcc tgggagaagc tggaggcggt cacccggccc
     2461 gccgccgtcg agcggcaccg ggcggtcctc gggcatctcg gtgtaccgcc ggacgccgtc
     2521 accgtgtcgc cgtcggccgg cgagcgggtg ctggcgccgg tgttcgtcgg gctgctggag
     2581 caccgccggg aatcgcgggt cgtggtgtgc agtggtgtca ccggggcgcg gctccccgat
     2641 ctggccagcc atctaaccag ccggttgccg catgctctgg aagagatcgt gagccgggtc
     2701 cggcgcctgt aggtgcggat ttccaccacc ggccctttag gctggtggtg aaaggagagg
     2761 caatggcgac acaacgcacg agcttcacca agctccaacg ggacagggcc aagaaggcca
     2821 aggccgccgc caagcgcgag cgccggctcg agcgtgccgc cgaggcccgc aaccccaccg
     2881 acgacgccga cgggttcgag gcctccgccg agggcccgat ctcggccgcc gagctgctgc
     2941 acgagatcga ggtcacccac cagcgcttcg aggccaagct catcagctac gaggagttcg
     3001 aggagaagaa ggcggagctg ctgtcccgcc tgccgatcga ctgacgagcc tcggcccgcc
     3061 cggggctagg gcagcaggcg cagcgtcacg agctcgaacg ggcggacggt gagggcgagc
     3121 ccgtccccgt cgacctcgat gtcgtcgccg tcccgctcga ggaggtcggt gcggacggcc
     3181 cgggtgcacg gcacgccagg gcgcagccgc acccggcacc gcccgccgag cgcctcgtag
     3241 ccccgcagga tcacgccccg gccgtcgtcg gcggccttca ccgtctcgac gacgaagccg
     3301 gggtcgccca cggtcaccag cgaatggtcc cgcggccgga gcgccgccgg cccggatgtc
     3361 cggacatccg gtctcacggc cagcggcgcc ccgagggcgt agccggcggc gatgaccggc
     3421 gtcaggtccc cgccgtgggg gagcagggcg taggtgaagc ggtgccggcc ccggtcgcag
     3481 agggggtcgg gggcggtcgg cgcccgcagc agtgacagcc gcagcgtgtc gccccgcacg
     3541 tcgtagccgt atttgcaatc gttgaggagc gccacgccgt agccggcctc cgacaggtcg
     3601 gcccagcgct gggcgcagac ctcgaagcgg gcctggtcga agggcgtgtt ggcgtgggtc
     3661 ggccgggcca ggtgcccgaa ctggatctcg aagcgggccg cggcggcgtg gaccgccacc
     3721 gggaaggcga
//
LOCUS       DATGJT010000699         3260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1232079, whole genome shotgun sequence.
ACCESSION   DATGJT010000699 DATGJT010000000
VERSION     DATGJT010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1232079"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VKX24_12130"
     CDS             <1..1041
                     /locus_tag="VKX24_12130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09277.1"
                     /translation="WSDRLNGDGTLAYYDPTDQRVRIRGTELTEPVKATLAHELTHAL
                     QDQHFGLSRLGASDDAVDRFRAVVEGDAMRVETKWVDHLDPAARKAYDAGRASEGDGV
                     DFSSVPEVLTVMFSAPYDLGEPFVELLKAVGGNPAVDRALTTPPASEEQLLDPFHYLA
                     GDAPIPVNEPDLHKGERRVDDGNFGAFALYLMLAQRLPPRDALRAVDGWGGDSYVQFE
                     RAGQSCVRADFVGDNTAHTGQMAGTLEAWARAMPPGAASVTRHDAQIELDACDPGATA
                     KIGPPRLADAVNWPLARTYTALGAIEAGMPEDTARCYSQALIEAFTPAQLSAPPSTAQ
                     RRQIAKLAATCR"
     gene            complement(1128..2018)
                     /locus_tag="VKX24_12135"
     CDS             complement(1128..2018)
                     /locus_tag="VKX24_12135"
                     /inference="COORDINATES: protein motif:HMM:NF020811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HLJ09278.1"
                     /translation="MIRPVDAAVGYAARGWAVFPVHSVVRGRCSCRRECAHPAKHPRV
                     ASGCHAASRDVAVIGRWWGRWPDATVAVATGAVSGIVVLDVDPRSGGSESLALLEDLV
                     GPVPATLTAHTGGGGTHLFFAHPYCRVGNTAGRVPGLPEPFPGLDVRGDGGYVIVAPS
                     RHASGGRYRWVDPPADLAPAPPWLQPALRPRWSPGRVSLPRVAGQRRAYAEAALAAET
                     ARVATAPVGHRNDVLNRAAFALGTLAGVLPATVVMDELLAAAAAAGLSASEAEATIRS
                     GVRAGTQHPRQPAHLSTGPG"
     gene            complement(2101..2469)
                     /locus_tag="VKX24_12140"
     CDS             complement(2101..2469)
                     /locus_tag="VKX24_12140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HLJ09279.1"
                     /translation="MASLPQFQVTQLIGRLTADPICRIGDKHESATFRLAVPRYGKGD
                     NADYIDIVTFDDLAKVCGTYLAKGRQVAVTGRLRLNEWTTNAGEKRSKIQVVADQVSF
                     LDAPRSDADHSQDQPEPAAV"
     gene            complement(2542..2910)
                     /locus_tag="VKX24_12145"
     CDS             complement(2542..2910)
                     /locus_tag="VKX24_12145"
                     /inference="COORDINATES: protein motif:HMM:NF012651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HLJ09280.1"
                     /translation="MSTTPAVNSITLVGHLTADPVLRPIDENRQVCDLRLAVNDHKDQ
                     PLFIDVATFGAQAEACAKYLSKGRAIAVTGRLIYREWTAEDGSRRSKHAVVGRVQFGA
                     KPDEPTPDAVDIDEDEMAVL"
BASE COUNT          475 a         1137 c         1213 g          435 t
ORIGIN      
        1 tggagcgacc ggttgaacgg cgacgggacc ctggcctact acgaccccac cgaccagcgg
       61 gtgcggatcc gaggaaccga actgacggag ccggtcaagg cgaccctggc ccatgaactc
      121 acccacgccc tccaggacca gcacttcggc ctgtcacgcc tgggggccag cgacgacgcc
      181 gtcgaccggt tccgggccgt cgtggaaggc gacgccatgc gggtcgagac gaagtgggtg
      241 gaccacctcg accccgcggc gcgcaaggcg tacgacgccg gccgggccag cgagggggac
      301 ggcgtcgact tcagctcggt ccccgaagtc ctgaccgtca tgttcagcgc cccctacgac
      361 ctcggtgagc ccttcgtcga gctcctcaaa gccgtcggcg gcaacccggc cgtcgaccgc
      421 gccctgacca cccctccggc cagcgaggag caactcctcg acccgttcca ctacctggcc
      481 ggcgacgccc ccatcccggt gaacgagccc gacctccaca agggcgaacg gcgcgtcgac
      541 gacggtaact tcggcgcctt cgctctctac ctgatgctcg cccagcgcct gccccctcgg
      601 gacgcgctgc gggcggtgga cggatggggc ggggacagct acgtccagtt cgaacgggcc
      661 ggccaatcct gtgtccgggc cgacttcgta ggcgacaaca ccgcccacac cggccagatg
      721 gcggggacgc tcgaagcctg ggcccgggcc atgccgcccg gcgcggcgtc ggtgacccgc
      781 cacgacgccc agatcgaact ggacgcctgc gaccccggcg ccaccgccaa gatcggcccg
      841 ccccggctcg ccgatgccgt caactggccc ctggcccgga cctacaccgc gctcggagcg
      901 atcgaggccg ggatgcccga ggacaccgcc cgctgctaca gccaggcgct catcgaggcc
      961 ttcacacccg cccaactctc ggcccccccg tcgacggcgc aacgccgcca gatcgccaaa
     1021 ctcgccgcca cctgcagata acacccggag ccggcgcaag cgacagcctc gtcatcgacg
     1081 cgccgatcct gcccggcggc gccatcgctc accgcctcgt tcgaacatca gcccggtccc
     1141 gtgctcaagt gggccggctg gcggggatgt tgggtgccgg cccgcacgcc gctgcggatg
     1201 gtcgcttccg cctcggaggc ggacagcccg gcggcggccg ccgcggccag gagctcgtcc
     1261 atcaccaccg tggcgggcaa cacgccggcc aaggtgccga gggcgaacgc ggcccgattc
     1321 aagacatcgt tgcggtgccc caccggcgcc gtcgccaccc gagccgtctc ggccgccaac
     1381 gccgcctcgg cgtaggcccg gcgctgcccc gccaccctcg gcagcgacac ccggccggga
     1441 gaccaccgtg gccgcagggc gggctgcagc cagggcggcg caggagccag gtccgccggt
     1501 gggtcgaccc agcgataacg gccgccggag gcatgacgac tcggggcgac gatgacgtag
     1561 ccgccgtcgc cccgcacatc gaggccgggg aacggttccg ggagacccgg aacccgcccg
     1621 gcggtattgc ccacccgaca gtacgggtga gcgaagaaca ggtgggtccc accgccaccg
     1681 gtgtgggcgg tcagcgtcgc cggcaccggc ccgaccaggt cctcgaggag ggcgagcgat
     1741 tcgctgccgc cggagcgggg atcgacatcg aggaccacga tccccgaaac ggccccggtg
     1801 gccaccgcca cggtggcgtc gggccagcgg ccccaccagc ggccgatcac ggcgacgtcc
     1861 cggctggcag cgtggcaccc gctggccacg cgggggtgct tggccggatg ggcacattcg
     1921 cgccggcacg agcagcggcc acgcacgacc gaatggacgg ggaacaccgc ccagcctcga
     1981 gcggcgtagc cgacggcggc gtcgacgggt cggatcatcg tgacctcctt tcggcggagt
     2041 tgggtgaggg ttggtggtcg gggccgaccg gtgctgggcg gccggccccg acccggggcg
     2101 tcacaccgca gccggttcgg gctggtcctg gctgtggtcg gcgtcggagc ggggagcgtc
     2161 caggaagctg acctggtcgg ccacgacctg gatcttcgag cgcttctcgc cggcgttggt
     2221 ggtccactcg ttgaggcgga gccggccggt gaccgccacc tggcggccct tggccaggta
     2281 ggtgccgcac accttggcca ggtcgtcgaa ggtcacgatg tcgatgtagt cggcgttgtc
     2341 acccttgccg tagcggggga cggccagacg gaaggtggcc gactcgtgct tgtcaccgat
     2401 ccggcagatg gggtcagcgg tcagacggcc gatgagctgg gttacttgga attggggcag
     2461 gctcgccatg gcggggctcc ttggtggcgg ggtgggttcg ggcgccggcg gtcgtgggga
     2521 cggccggcgc ccgaggcttg gttaaaggac ggccatttcg tcttcgtcga tgtcgacggc
     2581 gtcgggggtg ggttcgtcgg gcttggcacc gaactggacc cggccgacga cggcgtgctt
     2641 ggagcggcgg ctgccgtcct cggcggtcca ttcccggtag atcagccggc cggtgacggc
     2701 gatagcgcgt cccttgctga ggtacttggc gcaggcctcg gcctgggcgc cgaaggtggc
     2761 cacgtcgatg aagaggggct ggtccttgtg gtcgttgacg gcgaggcgca ggtcgcagac
     2821 ctggcggttc tcgtcgatgg ggcgcaggac cgggtcggcg gtgaggtgac cgacgagggt
     2881 gatcgagttg acggcggggg tggtgctcat ggttggttcc tcctttgggg gatccggtgg
     2941 ttgacagagc ccgaaccgcc ggccggtggc cggacgcgga accgagccct tgggtgaggg
     3001 aaagggagcg cagcgacctt gcagcgtctg gtcggtcggc gagactgggc gtcggcaacc
     3061 agtgccggtc ccctcggagg agaagaccgg gtgagcaact cggccgtgcc gaatgcgctc
     3121 agatggcatt ggggacctcg accttggacg aaggccggcg tcgggaccgg ctcgtcgggc
     3181 gggcggatcg ggtcagcgcc accggcgttg gcccggccgg ggtggcgatg ccggcgaggc
     3241 ggtcgatgag ggcgtggacg
//
LOCUS       DATGJT010000700         5234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1232229, whole genome shotgun sequence.
ACCESSION   DATGJT010000700 DATGJT010000000
VERSION     DATGJT010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5234
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1232229"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1086
                     /locus_tag="VKX24_12150"
     CDS             <1..1086
                     /locus_tag="VKX24_12150"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLJ09281.1"
                     /translation="SGPNFGVPGGGFDPFGGGAFGGGAFGGGAFGGGAFGGGTSAGAA
                     QAPTDEAASKVAAAVDPGIVDVNTQIDYGSAAGAGTGMILSSDGLILTNNHVVDGATQ
                     ITVTTVDNGRRYQATVVGTDATEDIAVLQLKNASGLTPIPLGDSGKVAVGDPVVALGN
                     AGGVGGTPVVATGVVEATGQTITASDDDGSNPETLNDLIEVNAPIQPGDSGGPLVNSA
                     GQVVGIDTAAEVGGRGWRMRNSTTGTGYAIPIDHALDVAHQIEQGQGSDTIHLGTSGF
                     LGVAVDSGADGVVVEAVEPNTPAQHAGLVAGDTIDAVDGQPVDSPDTLSALTKAHHAG
                     DSVSLTWTDQNGNQHTTKVTLAAGAPD"
     gene            1150..1923
                     /locus_tag="VKX24_12155"
     CDS             1150..1923
                     /locus_tag="VKX24_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011984795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ09282.1"
                     /translation="MQQPAGDTWDPAQYRRFEAERDQPFHELLALVEPVPGGQLVDLG
                     CGDGRLTALAHRSLEPATTLGVDSSAAMLAAAPTAAGLRFELGDIGTWASPAAYDVVL
                     ANAALQWVADHRAVLGRWRAALRPGGQLAVQVPANADHPSHRVVAEVAGSMGLDVEPD
                     PVAVNVLRSEEYADVLDGLGAAELHVRLQVFVHHLRSTADVVEWVKGTTLTRVKRATD
                     ADGYERFLARYRSRLLAELGERAPYTYLFKRILFRARFP"
     gene            complement(1983..2780)
                     /locus_tag="VKX24_12160"
     CDS             complement(1983..2780)
                     /locus_tag="VKX24_12160"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ09283.1"
                     /translation="MEALWESALGTLWPLRPGWVSATVDGGWLAEQGGSAVGAALLSG
                     PALVGLVVDPEHRARGVGSALLRTSAPDSIGYGGGQWLWPGVPDNLPGALPFLERRGW
                     SPRETVWDFVADLADFRPDPAVRETPGVTYRPAAAADMADVLHFEGAHFPYWLPHYDT
                     TDADSVFLAVKGGEIAGTLRLEWPARHGPGRWSRLLGDELGGLRAVGVGRPFRGDGIG
                     TAMVVAATEHLRRLGAGVCLIDWLVRTAFYERAGYRPWRSYRLVEPA"
     gene            3621..4295
                     /locus_tag="VKX24_12165"
     CDS             3621..4295
                     /locus_tag="VKX24_12165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09284.1"
                     /translation="MANAVVIVIVAAAGVVSVTLLARTARAANRINHKAENIARTGQG
                     INTATDSVIQLRRTNETASSILDSAKPLEGKLSQVVTLAQSVDGLAKSINGTAGTING
                     TGGTINGTASAINGSAVKINGTAKTIGATAKAISGSAGSINTSAGTINGTAKDINAQA
                     AAILDVAKRINDDVAQINRNLDGTIALAQAIKGDTGNIVGEATTADRYARCIDNRIPP
                     GTGGPC"
     gene            4315..5052
                     /locus_tag="VKX24_12170"
     CDS             4315..5052
                     /locus_tag="VKX24_12170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09285.1"
                     /translation="MTAAAVSAPRRTGSNTLTGWMWTWVTIGILVVLVVVGFLTGIVS
                     SLEHIDTNLAEANSAVTGAGGNVKPLPADIADINSTLGSVDNALKPIAGQADQIITNL
                     TSIQGSLTSVDGSLKDTSGTLVGTSGSLVNTSASLVDTGNSLADTSTVLSGTSGVLAG
                     IAKSLVDTSNVLAGVKGTAVSITGTLEDAEHPADGLGAHNIYERVATANGVLTAAQGD
                     AGNILGGLKSVNGSLKSVCSKLGSPCS"
     gene            5043..>5234
                     /locus_tag="VKX24_12175"
     CDS             5043..>5234
                     /locus_tag="VKX24_12175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09286.1"
                     /translation="MQLSDATVARLDDERGLAGKILVGVVAWALGAVLLLTSTLVSAQ
                     QIDSRVERIRHTVSPIDHNL"
BASE COUNT          805 a         1903 c         1875 g          651 t
ORIGIN      
        1 tcggggccga acttcggcgt cccgggcggc ggcttcgacc cgttcggcgg cggcgcgttc
       61 ggcggcggcg cgttcggcgg cggcgcgttc ggcggcggcg cgttcggcgg cggcacctcg
      121 gccggcgccg cacaggcgcc caccgacgag gcggcgtcca aggtcgccgc cgccgtcgat
      181 cccggcatcg tcgacgtcaa cacccagatc gactacgggt cggccgccgg cgccgggacg
      241 ggcatgatcc tctcctcgga cgggctgatc ctgaccaaca accacgtcgt ggacggcgcc
      301 acccagatca ccgtcaccac ggtcgacaac gggcgccgct accaggcgac ggtcgtcggc
      361 acggacgcca ccgaggacat cgccgtcctc cagctgaaga acgcctcggg cctgaccccc
      421 atcccgctcg gcgactccgg caaggtcgcc gtcggcgacc cggtcgtggc cctcggcaac
      481 gccggcggcg tcggcggcac gccggtcgtc gccaccggtg tcgtcgaggc caccggccag
      541 acgatcaccg ccagcgacga cgacggctcc aacccggaga ccctcaacga cctcatcgag
      601 gtcaacgccc cgatccagcc gggcgactcc ggcgggccgc tggtcaacag cgccggccag
      661 gtcgtcggca tcgacacggc ggccgaggtc ggcggccggg gctggcggat gcgcaactcc
      721 acgaccggga ccggctacgc catcccgatc gaccacgccc tcgacgtcgc ccaccagatc
      781 gaacagggcc aggggtccga caccatccac ctcggcacga gcgggttcct gggcgtcgcc
      841 gtcgactccg gggccgacgg ggtcgtggtc gaggccgtcg agcccaacac gccggcccag
      901 cacgctggtc tcgtcgccgg cgacacgatc gacgccgtcg acggccagcc cgtcgactcc
      961 cccgacaccc tgtcggccct gaccaaggcc caccacgccg gcgacagcgt cagcctgacg
     1021 tggaccgacc agaacgggaa ccagcacacg accaaggtca cgctcgccgc cggcgccccg
     1081 gactagcggc ggccatcggg gcccgacgat gatcgtcggg tccggacggg aggcggagag
     1141 gatcgggccg tgcagcagcc ggcgggcgac acctgggacc cggcgcagta ccggcgcttc
     1201 gaggccgaac gggaccagcc gttccacgag ctcctggcgt tggtggagcc ggtccccggc
     1261 gggcagctgg tggacctcgg ctgcggcgac ggacggctca cggccctggc ccaccggtcg
     1321 ctcgagccgg ccacgacgct cggcgtcgac tcgtcggcgg ccatgctggc ggccgccccg
     1381 acggcggcgg ggctgcggtt cgagctcggc gacatcggga cctgggcgtc gcccgccgcc
     1441 tacgacgtcg tgctggccaa cgccgccctg cagtgggtgg ccgaccaccg ggcggtgctc
     1501 ggccgctggc gggccgccct ccggcccggc ggccagctgg cggtccaggt gccggccaac
     1561 gccgaccacc cgtcccaccg ggtcgtggcc gaggtggcgg gctcgatggg tctcgacgtc
     1621 gagcccgacc cggtggcggt caacgtgttg cggtccgagg agtacgccga cgtcctcgac
     1681 ggcctcggcg ccgccgagct gcacgtgcgg ctgcaggtct tcgtccacca cctccggtcc
     1741 accgccgacg tggtggagtg ggtgaagggc acgaccctga cccgggtgaa gcgggccacg
     1801 gacgccgacg gctacgagcg cttcctggcc cgctaccggt cccggctgct ggccgagctc
     1861 ggcgagcggg cgccctacac ctatctgttc aagcggatcc tcttccgggc ccgctttccc
     1921 tgaccggccg ggtcagccgg tggggaggcc gggcggcgga gggggcgcgc cgcagcgaag
     1981 ggctacgccg gctccaccag ccggtacgac cgccacggcc ggtagcccgc ccgttcgtag
     2041 aaggccgtgc ggaccagcca gtcgatgagg cacacccccg ctccgaggcg gcggaggtgc
     2101 tccgtggccg ccacgaccat cgccgtgccg atgccgtcgc cccggaacgg gcggcccacg
     2161 ccgaccgccc gcaggccgcc gagctcgtcg ccgaggagcc gcgaccaccg gcccgggccg
     2221 tggcgggccg gccattcgag ccgtagcgtg ccggcgatct cgccgccctt gacggcgagg
     2281 aagacgctgt cggcgtcggt ggtgtcgtag tgcgggagcc agtagggaaa gtgggcgccc
     2341 tcgaagtgga ggacgtcggc catgtcggcg gccgccgccg gtcggtacgt gaccccgggc
     2401 gtctcccgga cggcgggatc gggccggaag tcggcgaggt cggcgacgaa gtcccacacc
     2461 gtctcccggg gagaccagcc ccggcgctcc aggaagggca aggccccggg cagattgtcg
     2521 ggcacgccgg gccacagcca ctggccgccg ccgtagccga tgctgtccgg cgccgacgtc
     2581 cgcagcaggg cgctcccgac cccccgggcg cggtgttcgg gatcgacgac gagcccgacc
     2641 agtgccgggc cgctgagcag cgcggcgccg acggccgagc cgccctgttc ggccagccag
     2701 ccgccgtcca ccgtggcgct cacccatccc ggccggaggg gccacagggt gccgagagcc
     2761 gactcccaca acgcctccac cgcagcggcg tcgggaccgg ggaggagtgg gcgaagggcg
     2821 gcggcgacgg cgggctccct tgtcggtggg ccgtcacggg cctacccagg aggtgggcgg
     2881 cggaacccgt cgctgagcgc ggacgtcttc cggggcaccc agtctccgtt ctgcaccgaa
     2941 cgcaatatga tgaatcgtcg agcgtcccgt gggctctatg acgacgtcga cgctgggggc
     3001 caggccacct tgaatgcgca gttcagactg cagttccagc cgtgcgttcc tgccccggac
     3061 gacctacggt catttcgcca ctaggtgtgc ccgttaccta gagaaatttc gagtagtcac
     3121 tttccttttt tcccgagtgg tcataagttc accgtggctt cgtaggaagc ggccggcggg
     3181 ggtgggccgg accagggttc gcatcggatc ctgatgaacg acgaccgggg ggcggccatg
     3241 ttggcgtggg cgggattcgc aggtggaggc gcgctcggtg caccgccggc gcgggagggg
     3301 gcggcccggc ggcccgcctc ggtgacgtcg tgaccgtcct cgtggtgatc gccctcgtga
     3361 tcgtgttcct gctgggtgcg gtcctgctcg tctcgggcca ggacatcgcc cggtaccgcc
     3421 gtttgaagcg catgtagcgg gcccgccggc cgcaaggggg agccatcgtc ggcggccgcc
     3481 aaccgccgct gcacggcaga ttcgtgtctc ggacgggcct cgcggcgacg gacgccgcgg
     3541 cccacagggg ggtggcagct ttggtcgaga ggggccatga acagcaccgc cggccgcggg
     3601 gcgagcgagg ggcggtcgca gtggcgaacg ccgtcgtcat cgtcatcgtg gccgccgccg
     3661 gcgtcgtcag cgtgacgttg ctggcccgta cggcgagggc ggcgaaccgc atcaaccaca
     3721 aggccgagaa catcgccagg accggacagg ggatcaacac cgccaccgac tcggtgatcc
     3781 agctgagacg gacgaacgag acggccagct ccatcctcga cagcgccaag ccgctggagg
     3841 gcaagctgag ccaggtcgtc acgctggccc agtcggtcga cggcctggcc aagtcgatca
     3901 acggcacggc cggcacgatc aacggcacgg gcggcaccat caacggcacg gcgtcggcga
     3961 tcaacggcag cgcagtgaag atcaacggca ctgccaagac gatcggcgcg acggccaagg
     4021 ccatcagcgg cagcgccggg agtatcaata ccagcgccgg cacgatcaac gggacggcca
     4081 aggacatcaa cgcccaggcg gccgccatcc tcgacgtcgc caagcgcatc aacgacgacg
     4141 tcgcgcagat caaccgcaac ctcgacggaa cgatcgccct ggcccaggcc atcaaggggg
     4201 acaccggcaa catcgtgggc gaggccacga ccgccgaccg ctacgcccgc tgcatcgaca
     4261 accggatccc gcccggcacg ggcgggccgt gctgacgggg aaggagcgag agccatgaca
     4321 gcagcagccg tatccgcacc ccggcggacc gggtcgaaca cgctcacggg gtggatgtgg
     4381 acctgggtca cgatcggcat cctcgtcgtg ctcgtggtgg tcggcttcct gaccgggatc
     4441 gtgtcgtcgc tcgagcacat cgacaccaat ctggccgagg cgaactccgc cgtgaccgga
     4501 gcgggcggca acgtcaagcc gctcccggcc gacatcgccg acatcaactc cacgctgggg
     4561 tccgtcgaca acgccctcaa gcccatcgcc ggccaggccg accagatcat caccaacctc
     4621 acctccatcc aggggtcgct caccagcgtg gacggctcgc tcaaggacac gtcggggacg
     4681 ctcgtcggca cgtccggctc gttggtgaac acctccgctt cgctggtcga tacggggaac
     4741 tcgctggcgg acacgtccac agtgctgtcg gggacgtccg gcgtcctggc cgggatcgcc
     4801 aagtcgctcg tcgacacgtc gaacgtgctc gccggcgtca aaggcacggc ggtgtcgatc
     4861 accggcacgc tggaagacgc cgagcacccg gccgacgggc tcggtgccca caacatctac
     4921 gagcgggtgg cgaccgccaa cggcgtgctc accgccgccc aaggcgatgc cggcaacatc
     4981 ctcggcggtc tgaagagcgt caacggttcg ctgaagagcg tctgcagcaa gctgggatcg
     5041 ccatgcagct gagcgacgcc accgtggcgc gtctcgacga cgagcggggc ctggccggca
     5101 agatcctggt cggagtggtg gcctgggccc tcggggcggt cctcctgctg accagcacgc
     5161 tggtgtcggc gcagcagatt gacagccggg tcgagcggat ccggcacacc gtgagcccga
     5221 tcgaccacaa cctc
//
LOCUS       DATGJT010000701         2945 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_611756, whole genome shotgun sequence.
ACCESSION   DATGJT010000701 DATGJT010000000
VERSION     DATGJT010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611756"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /locus_tag="VKX24_12180"
     CDS             complement(<1..990)
                     /locus_tag="VKX24_12180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09287.1"
                     /translation="MAPLVLATLFLPPVHHAGADGLGPPPAAGADSGGGFHGFASFDN
                     HAQAQIVTLTGYLNAFREDDSLVGTATEINGPPANSRNVAAFFERGRGATFVYGVIGG
                     HGGERGTLPDPPPGEANAYYPTSDPPYEMTWSGPITGAGFPQVVDSRFHAKATEVPTG
                     RTDGAVTALSDPGYFTVGQATAVSHSEPVEGGVAAEGVSVVHQLQVGPLLIQNIVSRA
                     YAFVPTSGDPKGIATTVIDGAKVGDTPVQITDKGIVVADKTNPLDQDKVNKAMADAGY
                     PQVRLVPSVAKSGDDGQSISATAGTLEFVKQDQKFGASNPQGFSGGGFSIGGAA"
     gene            complement(1020..1760)
                     /locus_tag="VKX24_12185"
     CDS             complement(1020..1760)
                     /locus_tag="VKX24_12185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011719921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ09288.1"
                     /translation="MLEVRGLTVSYGPVKVLHGIDLDIGSGEIVALIGPNGAGKTSTL
                     NAVAGLLPHQGQVTLDGEALPPAAEEVVRRGLALVPQGRRVFPTMTVEENLLMGAYSK
                     GARWKGFDDRVAPVYDIFPRLGERRRQEAGKLSGGEQQMLVIGRALLSEPKVVLIDEL
                     SLGLAPKMVLTLLETIQRFNAEYGTACLLVEQAATAALKIATSAYLLQRGNVVYHGPA
                     ARLRDDVDVLHSAYLGQGTARRESALRR"
     gene            complement(1760..2728)
                     /locus_tag="VKX24_12190"
     CDS             complement(1760..2728)
                     /locus_tag="VKX24_12190"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ09289.1"
                     /translation="MNRREIFSPAAKQRAARFMAERGTAVRRPNGGNGHGRTLVLDPA
                     KLARFEPARERVAGQLTDGTLPARRRPVERREILQVSDLTIHFGGVHALEGVDLVART
                     AEIAGVIGPNGAGKTTFFNCLSGLLTPDRGNIVFDGHKLDGSPASRGRVGLGRTFQTP
                     RLFGSLSVLQNLSFGCRTADFSRREYVFDPALRRLSHQERGARIARMVGYRGDLAAPA
                     GSLPFGDLRTVELARALCGAPSLLMLDEPASGLDVGQAEDFVELLRNLSDLGLSILLI
                     EHDMSLVMGICDHITVLDFGQVIAEGPPSEIQRNEAVIEAYLGRSD"
     gene            complement(2725..>2945)
                     /locus_tag="VKX24_12195"
     CDS             complement(2725..>2945)
                     /locus_tag="VKX24_12195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09290.1"
                     /translation="YDQFFIGIVALVVVLWIPGGLADIGRRLWRRIEGRPPGPPLVSP
                     LEEIDVRDGVEGAIAAAAAGLESEGAGA"
BASE COUNT          397 a         1025 c         1104 g          419 t
ORIGIN      
        1 ggcggcgccg ccgatcgaga agccgccgcc ggagaagccc tgcgggttgg aggcgccgaa
       61 cttctggtcc tgcttgacga actccagcgt gccggcggtg gcgctgatcg actggccgtc
      121 gtcgccggac ttggccaccg acgggaccag ccggacctgc gggtagccgg cgtcggccat
      181 ggccttgttg accttgtcct ggtcgagggg gttcgtcttg tcggccacga cgatgccctt
      241 gtcggtgatc tggaccggcg tgtcgccgac cttggccccg tcgatcaccg tcgtggcgat
      301 gcccttcggg tcaccgctgg tggggacgaa ggcgtaggcc cgggacacga tgttctggat
      361 cagcagcggc ccgacctgga gctggtggac gaccgacacg ccctcggcgg ccacgccgcc
      421 ttcgaccggt tcgctgtgcg acaccgccgt ggcctgtccg acggtgaagt agccggggtc
      481 ggacagggcc gtgaccgcgc cgtcggtccg gccggtcggc acctcggtgg ccttggcgtg
      541 gaaccggctg tcgaccacct gggggaaccc ggcaccggtg atcgggccgg accaggtcat
      601 ctcgtagggc ggatcgctgg tggggtagta ggcgttggcc tcgccgggcg gcgggtcggg
      661 cagcgtcccc cgctccccgc cgtggccgcc gatcacgccg tagacgaacg tcgccccccg
      721 gccccgctcg aagaacgccg ccacgttgcg ggagttggcc ggcggcccgt tgatctcggt
      781 cgccgtcccc accaggctgt cgtcttcccg gaaggcgttg aggtacccgg tgagggtgac
      841 gatctgggcc tgggcgtggt tgtcgaacga ggcgaagccg tggaagcctc cgccgctgtc
      901 cgcgccggcc gccgggggcg ggccgaggcc gtcggcgccg gcgtggtgca ccggcggcag
      961 gaacagcgtt gccagcacca acggtgccac cgcaaccatg gtcatgagac gtctcacggt
     1021 cacctccgga gagcagattc cctgcgggcc gtcccctgcc cgaggtaggc gctgtgcagc
     1081 acgtcgacgt cgtcgcgcag gcgggcggcg ggcccgtggt agacgacgtt gccgcgctgc
     1141 agcaggtagg cggatgtggc gatcttgagg gcggcggtgg cggcctgctc caccaggagg
     1201 caggcggtgc cgtattcggc gttgaagcgc tggatggtct ccagcagcgt cagcaccatc
     1261 ttcggggcca gcccgagcga cagctcgtcg atgagcacga ccttcggctc cgacagcagc
     1321 gcccggccga tgaccagcat ctgctgctcc ccgccggaga gcttgccggc ctcctggcgg
     1381 cgccgttctc cgagccgggg gaagatgtcg tacaccggcg ccacccggtc gtcgaacccc
     1441 ttccaccggg cgcccttgga gtaggcgccc atgaggaggt tctcctccac ggtcatcgtg
     1501 gggaagaccc tccggccctg ggggacgagc gccagccccc ggcggacgac ctcctcggcc
     1561 gccggcggca acgcctcgcc gtcgagcgtc acctggccct ggtgggggag cagcccggcg
     1621 acggcgttga gggtcgacgt cttgccggcg ccgttgggcc cgatgagggc cacgatctcg
     1681 cccgagccga tgtcgaggtc gatcccgtgg aggaccttga ccggtccgta ggacaccgtg
     1741 agcccgcgaa cctcgagcat cagtcggacc tccccagata agcctcgatg accgcctcgt
     1801 tgcgctggat ctccgacggc ggaccttcgg cgatgacctg gccgaagtcg aggacggtga
     1861 tgtggtcgca gatgcccatg accaggctca tgtcgtgctc gatgagcagg atcgacaggc
     1921 ccaggtcgga caagttccgc agcagctcga cgaagtcctc ggcctgtccg acgtcgaggc
     1981 cggaggccgg ctcgtcgagc atcagcagcg acggtgcgcc gcacagggcc cgggcgagct
     2041 ccaccgtccg caggtcgccg aacggcaggc tgccggccgg ggcggcgagg tcgccgcggt
     2101 agccgaccat gcgggcgatc cgggcccccc gctcctggtg ggagagccgc cgcagcgccg
     2161 ggtcgaagac gtactccctc cgggagaagt cggccgtccg gcagccgaag ctcaggttct
     2221 gcagcaccga caggctgccg aagagccgcg gcgtctggaa ggtgcggccg aggccgaccc
     2281 ggccccggga ggccggagag ccgtcgagct tgtggccgtc gaagacgatg ttgccccggt
     2341 cgggcgtgag cagtcccgag aggcagttga agaacgtcgt cttgcccgcg ccgttggggc
     2401 cgatcacgcc ggcgatctcc gccgtgcggg cgacgaggtc gacgccttcc agggcgtgga
     2461 cgccgccgaa gtggatcgtg aggtcggaga cctggaggat ctcccgccgc tccaccggac
     2521 ggcggcgggc cgggagcgtc ccgtcggtga gctggccggc gacccgctcc cgggccggct
     2581 cgaagcgggc cagcttcgcc gggtcgagga ccagcgtcct cccgtggccg ttgccgccgt
     2641 tgggccggcg gacggcggtg ccgcgctcgg ccatgaaccg ggccgcccgc tgcttggcgg
     2701 cggggctgaa gatctcgcgc cggttcacgc cccggcccct tccgactcga ggccggcggc
     2761 ggcggcggcg atggcgccct cgacgccgtc gcgcacgtcg atctcctcca gcgggctgac
     2821 cagcggcggg ccgggcgggc ggccctcgat gcggcgccac agacggcggc cgatgtcggc
     2881 caggcccccg gggatccaca ggaccaccac gagggccacg atcccgatga agaactggtc
     2941 gtagc
//
LOCUS       DATGJT010000702         2309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1340836, whole genome shotgun sequence.
ACCESSION   DATGJT010000702 DATGJT010000000
VERSION     DATGJT010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340836"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1562)
                     /locus_tag="VKX24_12200"
     CDS             complement(<1..1562)
                     /locus_tag="VKX24_12200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HLJ09291.1"
                     /translation="MAASIRKLLVANRSEIAIRVFRAARELGIATVGVYSQEDRFCLH
                     RFKADESYLIGRGQEPVRAYLGVEEILRVAVEAGADAVHPGYGFLAENPSFAEACAGQ
                     GLVFIGPSAEVMRRLGHKVEARAAAEAAGVPVMPATAALPDDPAETARLARDLGFPLM
                     VKASWGGGGRGMRMVMTEDDLAEQVAAGRREARAAFGNGEVFLERLVERARHIEVQVL
                     GDAAGTVVHLFERDCSVQRRHQKVVEVAPATTLDDGQRAEVCDAAVRLARAVGYRNAG
                     TVEFLLDADSGRFFFIEVNPRLQVEHTVTEVVTGIDIVKAQIRIAEGAKIGTPESGVP
                     AQDEIRLSGCALQCRITTEDPENRFIPDYGRISAYRGATGFGIRLDGGTAYSGAIVTP
                     FYDSLLEKVTAWAPTREEAIARMSRALHEFRIRGVKTNLAFLGTLIDHPTFRSGNSTT
                     RFIDETPELLHFPRRRDRATRLLSFLGDVMVNGNPEVAGRPAPGRLPPAPVPTGLAPS
                     PERGTRLLLDELG"
     gene            1658..>2309
                     /locus_tag="VKX24_12205"
     CDS             1658..>2309
                     /locus_tag="VKX24_12205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009153592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HLJ09292.1"
                     /translation="MGSLRAVIFDVDGTLVDSERHGHRVAFNRAFAEFGLPYEWDEPT
                     YGRLLAVTGGQRRLHAYLAERGVDGPARDDLVPRLHARKTELFVGLAAAGEVPARPGA
                     VRLLDELGGAGVTVAVATTGSRAWVRPLLDRHFGPGRFAAVVTGDDCPRRKPEPDAYL
                     AALDALGVDPDAAVAVEDSDNGVRAARAAGLAVAVVTNDYTAGQALPGAAVVLDGFG"
BASE COUNT          286 a          852 c          874 g          297 t
ORIGIN      
        1 ccgagctcgt cgagcaggag ccgggtgccc cgctccggcg acggggccag gccggtcggg
       61 accggcgccg gcggcaggcg tccgggcgcc ggccggccgg ccacttcggg attgccgttg
      121 accatgacgt cgcccaggaa cgacagcagg cgggtggccc ggtcccggcg gcgggggaag
      181 tggagcagtt ccggggtctc gtcgatgaag cgggtggtgg agttgccgga ccggaacgtc
      241 gggtggtcga tgagcgtccc gaggaaggcc aggttggtct tcaccccccg gatgcggaac
      301 tcgtgcagcg cccggctcat ccgggcgatg gcctcctccc gggtcggcgc ccaggcggtc
      361 accttctcca gcagcgagtc gtagaacggg gtgacgatgg cgccggagta ggcggtgccg
      421 ccgtcgaggc ggatcccgaa cccggtggcg ccccggtagg cgctgatgcg cccgtagtcg
      481 ggaatgaagc ggttctccgg gtcctcggtg gtgatgcggc actgcagggc gcaacccgac
      541 aggcggatct cgtcctgggc cgggacgccg gactccggcg tgccgatctt cgccccttcg
      601 gcgatgcgga tctgcgcctt gacgatgtcg atcccggtca ccacctcggt cacggtgtgc
      661 tcgacctgga ggcgggggtt gacctcgatg aagaagaacc gcccggagtc ggcgtcgagg
      721 aggaactcca ccgtgccggc gttgcggtag ccgacggccc gggccaggcg gacggcggcg
      781 tcgcacacct cggcccgctg cccgtcgtcg agggtggtgg ccggggccac ctcgaccacc
      841 ttctggtggc ggcgctgaac gctgcagtcc cgctcgaaga ggtgcaccac cgtgccggcg
      901 gcgtcgccca gcacctgcac ctcgatgtgg cgggcccgtt ccaccagccg ttccaggaac
      961 acttcgccgt tgccgaaggc ggcccgggcc tcccgccgcc cggccgccac ctgctcggcc
     1021 agatcgtcct cggtcatgac catccgcatg ccccggcccc cgccccccca gctggccttg
     1081 accatcagcg gaaagccgag gtcccgggcc aggcgggcgg tctcggcggg gtcgtcgggg
     1141 agggccgcgg tggccggcat caccggcacc cccgccgcct ccgccgccgc ccgggcctcg
     1201 accttgtggc ccagccggcg catgacctcc gccgacgggc cgatgaacac cagcccctgc
     1261 ccggcgcagg cttcggcgaa ggacgggttc tcggccagga acccgtagcc cgggtggacg
     1321 gcgtcggcgc cggcctcgac ggccacccgc aggatctcct cgacgccgag gtaggcccgc
     1381 accggctcct ggccccgccc gatcaggtag ctctcgtcgg ccttgaagcg gtgcaggcag
     1441 aaccggtcct cctgggagta gacgccgacc gtggcgatgc cgagctcccg ggcggcccgg
     1501 aacacccgga tggcgatctc actgcggttg gcgacgagca gcttgcggat cgaggcggcc
     1561 atgggccgca agctagcggc gggggtcggc ccccgccggg gggagaccgg gggggattcg
     1621 acccggtgac ggccggccgg gaccgtacgg tggaggcatg gggtccctcc gggcggtcat
     1681 cttcgacgtc gacgggacgc tggtcgacag cgagcgccac ggtcaccgcg tcgccttcaa
     1741 ccgggccttc gccgagttcg gcctgcccta cgagtgggac gagccgacct acgggcggct
     1801 cctggccgtg accggcgggc agcggcggct gcacgcctac ctggccgagc ggggcgtcga
     1861 cgggccggcg cgggacgatc tcgtcccccg gctccacgcc cgcaagaccg agctgttcgt
     1921 cggcctggcc gccgccgggg aggtcccggc ccgccccggg gcggtccggc tcctcgacga
     1981 gctgggcggc gccggcgtga cggtggccgt ggcgaccacc gggagccggg cctgggtccg
     2041 accgctcctc gaccggcact tcggccccgg ccgattcgcc gccgtggtga ccggggacga
     2101 ctgcccccgc cgcaagcccg aacccgacgc ctacctggcc gccctcgacg cccttggcgt
     2161 cgacccggac gccgcggtgg ccgtggagga ctccgacaac ggcgtgcggg ccgcccgggc
     2221 cgccggcctg gcggtggccg tagtgaccaa cgactacacg gcgggccagg ccctgcccgg
     2281 cgccgccgtc gtcctcgacg ggttcggga
//
LOCUS       DATGJT010000703         2829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_95244, whole genome shotgun sequence.
ACCESSION   DATGJT010000703 DATGJT010000000
VERSION     DATGJT010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95244"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VKX24_12210"
     CDS             complement(<1..408)
                     /locus_tag="VKX24_12210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09293.1"
                     /translation="MPVVRNGVAILAPPATIGAVPDRWMAAEGIEAIHTVSSLVDARA
                     GAVLVDPPLGTHDEPPALAFGGWWLPPLYWDGALSPGFAVAQAMQVVTKVTAANATSV
                     LRAVAMLVERAHPTAAPQVADAVKEGLITALERA"
     gene            complement(773..1075)
                     /locus_tag="VKX24_12215"
     CDS             complement(773..1075)
                     /locus_tag="VKX24_12215"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family protein"
                     /protein_id="HLJ09294.1"
                     /translation="MSDRLPDVKATAVLGPAVGVAWVAIGDEVVVYRVDGAASLVLNS
                     TAGLLWQCLDGTSQLAEILDDIAVTFGANRAEVEKDCVTMVSTWLVENLVQEVTGG"
     gene            1581..2480
                     /locus_tag="VKX24_12220"
     CDS             1581..2480
                     /locus_tag="VKX24_12220"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004713 - protein tyrosine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004715 - non-membrane spanning protein
                     tyrosine kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsD/CapB family tyrosine-protein kinase"
                     /protein_id="HLJ09295.1"
                     /translation="MIVELGGPKSPLKSLEPAVASPIPTDDVEGPTSRTGRAILLGGF
                     GLLLGIGAAFVVERFDNRIRTKTAVEEALGVPVIAEVPAIRRSEQGRLVTGTESSPFI
                     EAYRDLRTMVAQTTGQTLVMVTSPTGREGKTTTVAQLAAALGEIGSSVMAISADLRRP
                     QLHAYFDKAQEPGLTDLLRGAPDVRRLEDLNMATGVRGVRFVASGAPVRNPGPVVEEL
                     GEYLKEARELGDFVLVDAPPLLTASEAADLAHLADGVLLVVRAGRTSIGAAVRSAELL
                     ERLNVPLIGVVLVGGDRGRRYRP"
     gene            2642..>2829
                     /locus_tag="VKX24_12225"
     CDS             2642..>2829
                     /locus_tag="VKX24_12225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09296.1"
                     /translation="MSPSRRPRPWLRVGSLLTSLGLLAGAVTIAFGSPAGAADMLPSN
                     VKFEQWKPSTSAFTTGAVV"
BASE COUNT          420 a          964 c         1000 g          445 t
ORIGIN      
        1 agcccgctcg agggcggtga tcaagccttc cttgaccgcg tcggcaacct ggggcgcggc
       61 ggtcggatgc gcccgctcga ccagcatggc gacggcacga agcaccgagg ttgcattggc
      121 ggcggtcacc ttggtgacga cctgcatggc ctgggcgacc gcaaagccgg gtgagagtgc
      181 accgtcccag tacagcggag gaagccacca cccgccgaac gccaatgccg gcggttcgtc
      241 atgggttccg aggggcggat ccacgagcac cgctcctgcc cgggcgtcga cgagcgacga
      301 gaccgtgtgg atcgcctcga tgccctctgc ggccatccaa cggtcaggta cggcaccgat
      361 cgttgccggc ggagcgagga tcgcgacgcc gtttcgcacg accggcatca gagcgatgcg
      421 aacctgcccc tcaccgggtg ggcgggcgtg ggaggccagg acgcgcaaga gggccgtcgc
      481 cacgcgagcc gcgtcccggg aacggagcag ggacgtggat ccgtggtaga gaccgggaag
      541 gggtcggggc tgacctcgac ccccgggcga cggcggatgg agttcgaggc agtagtccct
      601 cggctccccg acgtcctcga tgcgccacgg ttcgaggcgg tcaatggact cggcatcgtc
      661 gctgccgacg gcgatcgcct gcccgtccaa gccgatggtg atggaatgcg gccacacgga
      721 ccgcccaggg ccacctcacc cgtgaggcgg ttgtgccagg cgaacccacg tttcacccac
      781 cggtcacctc ctgcacgaga ttctcgacga gccaggtgct caccatcgtc acgcagtcct
      841 tctcaacctc ggcgcggttt gctccgaacg tgacagcgat gtcgtcgagg atttcggcta
      901 attggcttgt cccgtcgagg cactgccaca ggagcccggc cgtggagttg agcaccaggc
      961 tggcggcgcc gtcgacgcgg tacacgacga cctcgtctcc gattgccacc caggcgactc
     1021 cgaccgccgg cccgagaact gcggtcgcct tgacgtcggg aagccggtcg ctcacgacac
     1081 cgcaccgggc tgagtcgcgg gtcgcatctc gtgccatgga cgaatcatgg gatcagctta
     1141 cggtcgtcgt cgcccgttga tgcccatgcg actcgtacac tccgaggtgt ggtcggcctt
     1201 ctcccgtcat gagacttggc gagtcccttc tggtgatgcg acgatggtcg ttcgtcgtcg
     1261 tggccggcgt gctgttcggc ctgacggtcg gatggctctc ggcccccggc gccgctcgga
     1321 agaccacaac tttcgccgcc tcacagacgc tgatccttga tccgcaggct cgcggcgggt
     1381 cggatttgaa ccgaatggcg ctgttagcga ccgttggccc ggtgccggac cgcgttgcag
     1441 cacgacttgg actcgaccgg cagcgtgtgg aagcaatggt gtcggccgtt ccaaatagca
     1501 ccgtcgggat actgtcgata accggtcgag ggaccgacag ggcgcaggcg gaggcgctcg
     1561 cgaacgtcac gggagaggag ttgatcgtcg agctcggcgg gccgaaatcg ccgctcaagt
     1621 cgctcgagcc cgcggtggca tcgcccatac cgaccgacga cgtggagggg ccgacgtccc
     1681 gtaccggacg ggcgatcctc ctcggaggtt tcggcctgct gctggggatc ggagccgcct
     1741 tcgtggtgga gcggtttgac aatcgcatcc ggacaaagac tgcggtcgag gaggcgctcg
     1801 gggtgccggt catcgccgaa gtgcccgcca tccgccgctc cgagcaaggc cggctggtga
     1861 ccgggaccga gtcctccccg ttcatcgagg cctaccgcga cctgcggacg atggtcgccc
     1921 agacgacggg tcagacgctc gtaatggtca cgtcgccgac cggccgggag ggcaagacga
     1981 cgacggtggc ccagctggcg gcggcgctgg gggagatcgg ctcgtcggtg atggccattt
     2041 cggccgattt gcgccgcccg cagttgcacg cctatttcga caaggcccaa gagcccgggc
     2101 tcaccgacct cctccgggga gcgcccgacg tccggcggct cgaggacctg aacatggcca
     2161 ccggcgttcg aggcgtccgg ttcgtcgcgt ccggggcgcc ggtccggaac ccgggtccgg
     2221 tcgtcgaaga gctcggggag tacctcaagg aggcccggga gctgggcgac ttcgtgctcg
     2281 tcgacgcgcc cccgctgctg accgccagcg aggccgccga cctggcccac ctcgccgacg
     2341 gggtgctgct cgtcgtgcgg gccgggcgga cctcgatcgg ggccgccgtc cggagcgccg
     2401 agctgctcga gcgcctcaac gtgccgctca tcggagtggt gctcgtcggc ggcgatcggg
     2461 gtcgccggta ccggccgtaa acggaggatc ggcgcacttc tgccgctccc gcgctggcgg
     2521 tggaggaacg ccgcccgcct ggttcgaacc ttcctcttgg cgggatgccg gcgcgcggtg
     2581 tgcgcgctgc ggtcccgctg cccggacggg tgcccgtccg cgggaaccca aaggagtgtg
     2641 agtgtccccc tcacgccgtc cccgaccgtg gctgcgcgtc ggcagcctgc tcacgtccct
     2701 cggcctcctg gccggggccg tcaccatcgc cttcggctcg cctgcgggtg cggccgacat
     2761 gctgccgagc aacgtcaagt tcgagcagtg gaagccctcg acgtcggctt tcaccaccgg
     2821 cgccgtggt
//
LOCUS       DATGJT010000704         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_924561, whole genome shotgun sequence.
ACCESSION   DATGJT010000704 DATGJT010000000
VERSION     DATGJT010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924561"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VKX24_12230"
     CDS             complement(<1..485)
                     /locus_tag="VKX24_12230"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HLJ09297.1"
                     /translation="MTSSGPRIPPLPAAERDERASELLAPLTNDGRVLNIFATLVRHP
                     RLFNRWSPFGGTLLYRGELSGRHRELLILRTAWHCRAQYECGQHVRIAKAAGLTDDEI
                     GRVPAGPEAPGWPALDAALLRAADELHREAVIGDSTWAALAADLDERQLIEVCMVVGQ
                     Y"
     gene            629..919
                     /locus_tag="VKX24_12235"
     CDS             629..919
                     /locus_tag="VKX24_12235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09298.1"
                     /translation="MVDHDDDRQEEETRRFSRRAFLVGGATIGGTVLWGATSASATLP
                     PVLVSDNNEPPIIPGTGGTGLIINPGPGVVGKKHQHNFSGLGNTGSKSGGKG"
     gene            1043..>2104
                     /locus_tag="VKX24_12240"
     CDS             1043..>2104
                     /locus_tag="VKX24_12240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09299.1"
                     /translation="MLAVGLDAAEPAYLASLLDRGRLPNLLRLRTAGTWHELRTEPPW
                     RQGFTYNQVLAGRAPSAGDAWDVCRFDPRRYRAFKPVAGGQLGGPPFYERVAGMRTIV
                     FDFPWSAIGSAADVVEVVAWGAHSPHYPRASRPRGLLREIDRRVGVHPGFKNSWSAQW
                     HDRDSLDRMVEASVVGARRRAEAMAILQAGYPDWELSLVMMSETHDAGELLWHGADPD
                     HPLAQAVDAGHAAACLEAIYRGVDDAVGRMVAKCPPDTAVVVFSLFGSCSGPGDAPST
                     VLLPELLTRASGAPARLRPTGGETWKRAGCPPVVPARSEGWQEVVDRAWTDSGRPAAP
                     AAAEGGEGRWGPTRPGALGL"
BASE COUNT          264 a          752 c          801 g          287 t
ORIGIN      
        1 tggtactgcc cgaccaccat gcacacctcg atgagctggc gttcgtcgag atcggcggcg
       61 agggcggccc aggtgctgtc gccgatcacc gcctcccggt gcagctcgtc ggccgcccgg
      121 agcagggccg cgtcgagcgc gggccagccg ggggcctcgg gcccggcggg cacgcggccg
      181 atctcgtcgt cggtcaggcc cgccgccttg gcgatccgga cgtgctggcc acactcgtac
      241 tgggcgcggc agtgccaggc ggtgcgcagg atgaggagct cccggtggcg cccggagagc
      301 tcgccgcggt acaggagggt gccgccgaac ggcgaccacc ggttgaagag gcgggggtgg
      361 cgaacgagcg tcgcgaagat gttgagcacc cggccgtcgt tggtgagcgg cgcgaggagc
      421 tcgctggcgc gctcgtctcg ctcggccgcg ggcagcgggg ggatacgggg tccggaggag
      481 gtcatcggcg ggcaaaccta ccggccggcg ccggctgagt ccgcgccctc gcacgtcggg
      541 gtgccgatcc gggagcccgc gctggccgcc ggcaggggag cggttcccgt ccctggccgg
      601 agaggaggct gctgtctatg ctgtcgccat ggttgatcac gacgacgaca ggcaagagga
      661 agagacccgg cggttcagcc ggcgagcgtt cctcgttggt ggcgcgacga tcggtggcac
      721 ggtgctctgg ggggcaacct cggcctcggc gacgcttccg cccgtcctcg tctccgacaa
      781 caacgagcct ccgatcatcc ccgggaccgg cgggaccggc ctcatcatca accccggccc
      841 tggggtcgtc ggcaagaagc atcagcacaa cttctccggt ctcgggaaca cgggctccaa
      901 gtccggcggg aagggctgag cccgacatct gacgccctcg cggcgacggg cgcgcccggc
      961 gcgctcctcg gggatcttgc gtcgcccgcc cgtccacggg ccgcgaccgg cccgagggtg
     1021 attgactgac gctgtgtcga gggtgctcgc ggtcgggctc gacgcggccg agcccgccta
     1081 cctcgcgtca ctcctcgacc ggggacggtt gcccaacctc ctccggttgc gcaccgccgg
     1141 cacgtggcac gaactgagga ccgagccccc ctggcgccag ggcttcacct acaaccaggt
     1201 cctcgccggc cgcgcgccgt cagcgggcga tgcctgggac gtctgccggt tcgatccgcg
     1261 ccgctaccgc gcgttcaaac cggtggcggg gggacagctc ggaggccccc cgttctacga
     1321 gcgtgtggcg ggaatgcgca cgatcgtctt cgacttcccc tggagcgcga tcggttccgc
     1381 ggccgacgtg gtcgaggtgg tggcgtgggg cgcgcactcg ccgcactatc cgcgggcctc
     1441 gcgcccgagg ggactgctgc gggagatcga ccgccgggtc ggcgtccacc ccgggttcaa
     1501 gaactcctgg agcgcgcagt ggcacgaccg ggacagcctc gatcggatgg tcgaggcgtc
     1561 cgtggtcggc gctcggcggc gggccgaggc gatggccatc ctccaggccg gctaccccga
     1621 ctgggagctc tcgctcgtga tgatgtcgga gacccatgac gccggcgagc tcctgtggca
     1681 cggcgccgat cccgaccacc cgttggccca ggcggtggac gccgggcacg cggcggcctg
     1741 cctcgaggcc atctaccgcg gggtcgacga cgcggtgggg cgcatggtcg cgaagtgccc
     1801 tcccgacacg gccgtcgtcg tcttctccct cttcgggtcg tgcagcggac ccggcgacgc
     1861 gccctcgacg gtgctgctcc ccgagctcct gacccgcgcc tcgggcgcac cggccaggct
     1921 ccggccgacc ggcggcgaga cctggaagcg cgccggttgc ccgccggtcg tcccggcccg
     1981 atccgagggc tggcaggagg tcgtcgaccg ggcctggacc gactcgggcc ggcccgcggc
     2041 gccggcggcc gcagaagggg gtgaaggtcg gtgggggccg acgcggcccg gtgccctcgg
     2101 gctg
//
LOCUS       DATGJT010000705         3505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1341336, whole genome shotgun sequence.
ACCESSION   DATGJT010000705 DATGJT010000000
VERSION     DATGJT010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1341336"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2525)
                     /locus_tag="VKX24_12245"
     CDS             complement(<1..2525)
                     /locus_tag="VKX24_12245"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HLJ09300.1"
                     /translation="MRRTFFTLAAAVLAALPPAVAGAAAGGPKPSPAAAPATAPADLA
                     GELASGAKLTFPLPDPAGPASLSPGAQALVDHARPGDLLDLVLTIDRPGDRHVAGALS
                     RLGVWSTVFDQLPAAAVRLPVARLTDLRNLRGVLGVYDNRPLQFFLKDSAKLNNTYHA
                     WNDLKVTGKGVTVAIIDTGVDFTHPDLAPAMKANVKIAGFGQDPVPSVPIEGLPNSDT
                     SSGHGTHVAGDVAGRGTASHGEQKGMAYGADLVGIGTGDALSVFTALDGYNWMLQNRQ
                     KYDIKVVNNSWGVGFGPFDPMDPVALATKKATDAGITVVFANGNDGDEMSMNPYAAAP
                     WVIPVAAGTKTGKVTDFSSGGIEADTVGMNFKNGEIDGETRRPLNMGLYHPAVTTTGE
                     DVVSTRANNTIVPLTGAPQDIKNIPPDQLPYYTTLSGTSMASPETAGVVALILEADPA
                     LTPAQVRMVLQSTARPIAGAPFYKQGYGYTDASGAVDLAESLKGKSVSQTESILEAKQ
                     AARDQAVLDGLAHPARTYAYVDRAPLVVGKLTHAIQVDPGSERVKVISNGGTLPFVGV
                     TTYDITVKDASGKEVGTAEASAASGTTSLDLDLRKLDTDAAKAAQRFSGLAFGKWTVE
                     IGAVGTVAPPMDLGPADDAVEKRFITSLISVFGAQPKACSSLTGFTPVTTKDYRFQDD
                     KAVGVAAFPADPEFTYVGPLPNGTLGNRAPERRLAATFGQATTTGKKEPMFTTPPLTE
                     PATVGGSAQLRAFIQGPSEAVAGLLTGDLVDVDPTGAVNIIGQSPKDVAANASAANPT
                     ETKVPIPVAAPHTVPAGHQIGVRIRLSFVGTSAHTLFYDSDKYP"
     gene            2683..>3505
                     /gene="glp"
                     /locus_tag="VKX24_12250"
     CDS             2683..>3505
                     /gene="glp"
                     /locus_tag="VKX24_12250"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HLJ09301.1"
                     /translation="MIALEEAQKRILATVPRLSTVTVPVGEALGLVTAEPLAATEPIP
                     PFANTGVDGYAVRAADTAGAAPGSPVRLRVVGELPAGKAPSVPVGPREAIRIMTGAPI
                     PEGCDAIVMVEDTATDGDAVVIRRAAQEGDHVRAAGGDLAPGAAAIPAGAVLGPAHLG
                     VVSSLGHAAVTVVRRPRVAVMSTGDELVPPGEPLAIGQIRDSNRPMLIAQVAEAGCEP
                     IDFGIGVDDEAVITERLEKAAASCDAMVTSGGVSMGDYDIIKLVLSRIAEMNWWQI"
BASE COUNT          451 a         1185 c         1341 g          528 t
ORIGIN      
        1 gggtacttgt cggagtcgta gaacagcgtg tgggccgacg tcccgacgaa gctcagccgg
       61 atccgcacgc cgatctgatg gccggccggc accgtgtggg gcgccgccac cgggatgggc
      121 accttggtct cggtgggatt ggcggccgag gcgttggccg ccacgtcctt cgggctctgg
      181 ccgatgatgt tcaccgcgcc cgtcgggtcg acgtcgacga ggtcgccggt cagcaggccg
      241 gccacggcct cactcggccc ctggatgaag gcccgcagct gggccgaccc tccgaccgtc
      301 gccggctcgg tgagcggcgg ggtcgtgaac atcggctcct tcttgccggt ggtcgtggcc
      361 tggccgaacg tggccgccag tcgccgctcg ggggcccggt tgccgagcgt cccgttgggg
      421 agcgggccca cgtaggtgaa ctcggggtcg gcggggaagg cggcaacgcc gacggccttg
      481 tcgtcctgga agcggtagtc cttggtggtg acgggcgtga agccggtgag tgacgagcag
      541 gccttcggct gggcgccgaa caccgagatc aggctggtga tgaagcgctt ctcgaccgcg
      601 tcgtcggccg ggccgaggtc catcgggggc gccaccgtgc cgacggcgcc gatctcgacg
      661 gtccacttgc cgaaggccag gccggagaag cgctgggccg ccttggcggc gtcggtgtcg
      721 agcttgcgca gatcgaggtc cagcgacgtc gtgccggagg cggccgacgc ctcggccgtg
      781 cccacctcct tgccggaggc gtccttcacg gtgatgtcgt aggtggtcac gccgacgaac
      841 ggcaacgtcc cgccgttgct gatcaccttg acccgctcgc tgccggggtc gacctggatc
      901 gcgtgcgtga gcttgccgac caccagcggg gcccggtcga cgtaggcgta ggtccgggcg
      961 gggtgggcca gcccgtcgag gacggcctgg tcccgggccg cctgcttggc ctccaggatc
     1021 gactcggtct gcgagaccga cttgcccttc aggctctcgg cgaggtcgac ggcgcccgag
     1081 gcgtcggtgt agccgtagcc ctgcttgtag aagggcgccc cggcgatcgg gcgggcggtg
     1141 ctctggagca ccatgcggac ctgggccggc gtcagcgccg ggtcggcctc gaggatcagg
     1201 gcgacgacgc cggccgtctc cggcgaggcc atcgaggtgc ccgacagggt ggtgtagtag
     1261 ggcagctggt cgggcgggat gttcttgatg tcctgcggcg ccccggtcag cggcacgatc
     1321 gtgttgttgg cccgggtgga gacgacgtcc tcgccggtgg tggtgaccgc cgggtggtag
     1381 agacccatgt tgagcggccg gcgggtctca ccgtcgatct cgccgttctt gaagttcatc
     1441 ccgacggtgt cggcctcgat cccgccggag ctgaagtcgg tgaccttgcc ggtcttggtg
     1501 ccggcggcca ccgggatcac ccagggggcg gcggcgtagg ggttcatgct catctcgtcg
     1561 ccgtcgttgc cgttggcgaa gacgacggtg atgccggcgt cggtggcctt cttcgtggcc
     1621 agtgccaccg ggtccatcgg gtcgaagggc ccgaagccga cgccccagga gttgttgacg
     1681 accttgatgt cgtacttctg gcggttctgg agcatccagt tgtacccgtc gagggcggtg
     1741 aagaccgaga gggcgtcgcc cgtcccgatg ccgacgaggt cggcgccgta ggccatgccc
     1801 ttctgctcgc cgtgggaggc ggtgccgcga ccggcgacgt cgccggcgac gtgggtgccg
     1861 tgaccggacg acgtatcgga gttggggagg ccttcgatcg gcacgctggg gaccgggtcc
     1921 tgcccgaagc cggcgatctt cacgttggcc ttcatggccg gcgccaggtc ggggtgggtg
     1981 aagtcgacgc cggtgtcgat gatggccacg gtcacgccct tgccggtgac cttcaggtcg
     2041 ttccaggcgt ggtacgtgtt gttgagcttg gccgagtcct tgaggaagaa ctgcagcggc
     2101 cggttgtcgt agaccccgag cacgccgcgc aggttccgca gatcggtgag ccgggccacc
     2161 ggcaggcgga cggcggccgc cggcagctgg tcgaacaccg tcgaccagac accgagccgg
     2221 gacagggccc cggccacgtg ccggtcgccg ggccggtcga tggtcagcac gaggtcgagc
     2281 aggtcaccgg gccgggcgtg gtcgacgagg gcctgggccc ccggggacag cgacgccggg
     2341 ccggccgggt cgggcagcgg gaacgtcagc ttcgctccgc tggccagctc cccggcgaga
     2401 tcggccgggg cggtcgcggg cgccgcggcc ggcgagggct tcggccctcc ggcggcagcg
     2461 ccggcgacgg ccggcggtag ggcggccagt actgctgccg ccagcgtgaa gaacgttcgc
     2521 cgcatgggcc ctcccccgtg cactgagcat gcgtcggcac gacgctcgcc ggttcgaatc
     2581 cctcccgcac ctcggatggg acaaacgcca ccaaaccgga ggttcgtgat tttacggccc
     2641 cggaggtccg ttcggtgtcg cggcctcagt aacgtctaac ccgtgatcgc cctggaagag
     2701 gcccagaaac gcatcctcgc caccgtcccc cggctctcga cggtcaccgt gcccgtcggc
     2761 gaggcgctcg ggctcgtcac cgccgagccc ctggccgcca ccgaaccgat cccgccgttc
     2821 gccaacaccg gcgtcgacgg ctacgccgtc cgggccgccg acaccgccgg cgcagcgccg
     2881 ggctcccccg tccgcctccg ggtcgtgggc gagctgccgg ccgggaaggc gccgagcgtg
     2941 ccggtcgggc cgagggaggc gatccggatc atgaccgggg cgccgatccc cgaggggtgc
     3001 gacgccatcg tcatggtcga ggacaccgcc accgacggcg acgcggtcgt gatcaggcgg
     3061 gcggcgcagg agggcgacca cgtgcgcgcc gccgggggcg acctcgcgcc gggggcggcg
     3121 gccatcccgg ccggcgccgt cctcggcccc gcccacctcg gggtcgtgag cagcctgggg
     3181 cacgccgcgg tgacggtcgt ccgccggccc cgggtggcgg tcatgtcgac cggcgacgag
     3241 ctcgtcccgc ccggggagcc gctggccatc ggccagatcc gcgattccaa ccggccgatg
     3301 ctcatcgccc aggtggcgga ggccggctgc gagccgatcg acttcggcat cggcgtcgac
     3361 gacgaggcgg tgatcaccga gcggctggaa aaggctgccg ccagctgcga cgccatggtc
     3421 acgagcggcg gggtgtcgat gggcgactac gacatcatca agctcgtcct gtcccgcatc
     3481 gccgagatga actggtggca gatcg
//
LOCUS       DATGJT010000706         4030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_304840, whole genome shotgun sequence.
ACCESSION   DATGJT010000706 DATGJT010000000
VERSION     DATGJT010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304840"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            411..1268
                     /locus_tag="VKX24_12255"
                     /pseudo
     CDS             411..1268
                     /locus_tag="VKX24_12255"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(1350..2756)
                     /locus_tag="VKX24_12260"
     CDS             complement(1350..2756)
                     /locus_tag="VKX24_12260"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLJ09302.1"
                     /translation="MRPFSTVRARTVLGASLALGIGLLLSASTAGGLLRRSLIRNIDS
                     VAEARAADVAALAGAGRLPDGLSSEDGEIVQVVSPDRRVLAASLPAADGPPISSILPA
                     PGQFRTATVDGLQGGIGTEDEYRLLALRAAGAADPPVVYVAFGLDDVEHNVAVLRRLV
                     FFGVPGLLLLVALSAWLAVGRALRPVEAIRAELADISARDLDRRVPQSGAGDEVDRLA
                     RTMNAMLDRLEASSERQRRFVADSSEELVAPLADTRARLEAGLAAVPAGPTEGWPAAG
                     AELLRQHRRMERLVRDLLYLARADAGAPRAPLAPVDLDDVVLSEVTRLRTPHPGGLPR
                     TTGGPVRFETGAVSAAPVVGRPEDLRRAVRNLLEYAERHARSTVRVGLWTGDDGHVTL
                     VVEDDGSEQLPAETELVFEPFTRLSEPPSSAARETGSGLALAVVRDIAVAHGGHVAVE
                     AATPGSRFILDLPATPPG"
     gene            complement(2769..3446)
                     /locus_tag="VKX24_12265"
     CDS             complement(2769..3446)
                     /locus_tag="VKX24_12265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019180511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ09303.1"
                     /translation="MRVLVVEDERHLAGGIKRGLEAEGFAVDIAFDGPDGLERATEGD
                     YDAIVLDIMLPGMNGYKVCSTLREGGNWTPIIMLTAKDGELDEAEALDTGADDFLSKP
                     FSYIVLVARIRALLRRGGRERPPVLEVGDLRLDPAAHRCWRGEVEVTLTPRQFSLLEY
                     LMRKAGEVVSKAEILEHVWDYAFEGDPNIVEVYIRHLRKRIDEPFGRNAIQTVRLVGY
                     RLAADGG"
     gene            3499..>4030
                     /locus_tag="VKX24_12270"
     CDS             3499..>4030
                     /locus_tag="VKX24_12270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011586533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HLJ09304.1"
                     /translation="MITADDVELASLYRKLLLPRLVEEKMLRLLRQGRLSKWFSGIGQ
                     EAIAVGVVAGLQDGDVVLPLHRNLGVFTARGVELDRLLRQLLGREGGFTSGRDRSFHF
                     GTLEHGIVGMISHLGAMLPVACGLALAGRLSGSDRVVAVFSGDGGTSEGDFHEALNLA
                     AVWRLPVLFVVENNGWG"
BASE COUNT          509 a         1498 c         1524 g          499 t
ORIGIN      
        1 cctccgtgct ggtggtcggg gccggggtcc tggccgccgg cgtggccgtc gccgcgctcc
       61 tccaccgttc gctggtggcc gacaccgacc gggccgcctt tcaccgggcc gaggatgtcg
      121 tcgccctcgt cgaggccggc acgctgccct cccagctgcc catcccggcc gacaaggaca
      181 acgacgacct gctggtccag gtggccgatc cgtcggggcg catcgtcgcc gccagcgccc
      241 agatggtcga ctccggcgtc atgctgcccg gccgggcggc gccggggacc cgccgcaccg
      301 ccacggtcag gggcctgcgg cccgaccccg gggacgcctt ccgggtcgtg gccctcacca
      361 ccgccgggcc ccgccccggc tacaccgtct acatcgccaa cgagctcgag atggtggcgc
      421 agagcgacgc cgccctccgg cggctgctgg tccgggccgg gccgcccttc ctggtcctcg
      481 tggccgtggt gagctggctg atcgccgacc gggcgctgcg gcgggtggag ggcgtccgca
      541 ccagggtggc ggggatcacc gccgaggccc tcgaccagcg cgtccccgaa ccgccgggcg
      601 acgacgagat cacccgcctg gcccgcacga tgaacgagat gctcgaccgg ctccgggcgg
      661 ccgacgaacg tcagcgccgg ttcgtggccg acgcctccca cgagctgaag agcccgctgg
      721 cggcggtgca ggccgagctg gaggtggccc tggcccaccc ggaccaggcc gactgggagg
      781 ccaccgccac ccggctgctc gacgaggacc ggcggatgga gcggctggtg tccgacctgc
      841 tcttcctggc ccagtgcgac gacggcgacg ccggcctgct caccgccccg gcggagcggg
      901 tggccctcga cgccgtggtc gtcgatcagg tcgaccggct cggctcccgc tggacggtac
      961 cggtcgacgt ggacctcgcc gtcgacgggg aggcggccgt cgccggccgg gaggagcacc
     1021 tcgcccgggt ggtgcgcaac ctcctggaga acgccgcccg ccacgcccgc accggggtga
     1081 ccgtgactct ccgggccgcc gagggcgacg agctggagct ggtggtggcc gacgacgggc
     1141 ggggcatcga tcccgccgac cggagccggg tcttcgaccg gttcacccgt ctcgacgacg
     1201 cccgcagccg cgacgagggc ggcagcggcc tcgggctgcc gatcgcccgg gagatcgtcg
     1261 aggcccacgg tggccgcatc ttcatcgggg acgggcccgg cggccgcctc gtcgtgcggc
     1321 tcccacgggc gccggtgacg gcgggtcggt cagccgggcg gcgtggcggg caggtcgagg
     1381 atgaaccggg acccgggggt ggcggcctcc acggcgacgt gaccgccgtg ggcgacggcg
     1441 atgtcgcgca cgacggccag cgcgagcccc gagccggtct cccgggcggc tgaggacggc
     1501 ggctccgaca ggcgggtgaa gggctcgaag acgagctccg tctcggcggg gagctgctcg
     1561 ctgccgtcgt cctccaccac gagggtgacg tggccgtcgt cgcccgtcca caacccgacc
     1621 cgcacggtgg accgggcgtg gcgctcggcg tactccagga gattgcggac ggcccggcgg
     1681 aggtcctcgg gccggcccac cacgggggcg gccgacacgg cgcccgtctc gaaccgcacc
     1741 ggccccccgg tcgtccgggg gagcccgccg ggatggggag tgcggagccg ggtcacctcg
     1801 gacagcacga cgtcgtcgag gtcgaccggc gccagcggcg cccggggggc gccggcgtcg
     1861 gcccgggcca ggtagagcag gtcccgcacc agccgctcca tcctccggtg ctggcggagc
     1921 agctccgccc cggccgccgg ccagccttcc gtgggcccgg cggggacggc ggccagcccg
     1981 gcttcgagcc gggcccgggt gtcggccagc ggggccacga gctcctccga ggagtcggcc
     2041 acgaaccggc gctgccgttc cgacgacgcc tcgagccggt cgagcatggc gttcatcgtc
     2101 cgggccagcc ggtcgacctc gtcaccggcg cccgactgcg ggacccggcg gtcgaggtcc
     2161 cgggcggaga tgtcggccag ctcggcccgg atggcctcca ccggccgcag cgcccggccc
     2221 acggccagcc aggccgacag cgccaccagc agcagcagtc ccggcacgcc gaagaacacc
     2281 agccggcgga ggacggcgac gttgtgttcc acgtcgtcga ggccgaaggc gacgtagacc
     2341 acgggcgggt cggcggcgcc cgccgcccgc agggccagca gccggtactc gtcctcggtg
     2401 ccgatcccgc cctggaggcc gtcgaccgtt gcggtcctga actgacccgg cgccggcagg
     2461 atcgacgaga tcggcgggcc atcggcggcg ggcagggagg cggccagcac ccggcggtcg
     2521 gggctcacca cctggacgat ctcgccgtcc tccgacgaga ggccgtcggg cagccgcccg
     2581 gcgccggcca gggcggcgac gtcggcggcc cgggcctcgg ccaccgagtc gatgttgcgg
     2641 atcagggagc ggcgcagcag cccccccgcc gtcgaggcgg agaggaggag gccgatgccg
     2701 agggccagcg acgccccgag gacggtccgg gcccggacgg tcgagaaggg ccgcacggcc
     2761 ccagtctctc agcccccgtc ggcggccagg cggtacccga cgaggcgcac cgtctggatg
     2821 gcgttgcgcc cgaacggctc gtcgatccgc ttccggaggt gccggatgta gacctcgacg
     2881 atgttggggt cgccctcaaa ggcgtagtcc cacacgtgct cgaggatctc ggccttggac
     2941 accacctcgc cggccttgcg catcaggtac tccagcagcg agaactgccg gggggtcagc
     3001 gtgacctcga cctcgccccg ccagcaccgg tgggcggccg ggtcgagccg caggtcgccg
     3061 acttcgagga cgggcggccg ctcccgcccg ccccggcgca gcagcgcccg gatgcgggcc
     3121 acgagcacga tgtaggagaa gggcttggac aggaagtcgt cggcgccggt gtcgagcgcc
     3181 tcggcctcgt cgagctcgcc gtccttggcg gtgagcatga tgatcggcgt ccagttgccg
     3241 ccctcccgga gggtcgagca gaccttgtag ccgttcatgc ccggcagcat gatgtcgagg
     3301 acgatggcgt cgtagtcgcc ctcggtggcc cgctccagcc cgtccggccc atcgaaggcg
     3361 atgtcgacgg cgaagccctc cgcctccaga ccgcgcttga tgccaccggc caggtgccgc
     3421 tcgtcttcga ccaccaggac tcgcatggcc cggagcttga cagcgaggat ctgaagcccc
     3481 gatgaacgcc cgctgatcgt gatcaccgcc gacgacgtcg aactggcctc tctctaccga
     3541 aagctcctgc tgccgcggct ggtggaggag aagatgctcc ggctgctccg tcaggggcgg
     3601 ctgtcgaagt ggttctccgg catcgggcag gaggccatcg ccgtcggggt ggtggcgggc
     3661 ctgcaggacg gcgacgtcgt cctgcccctg caccgcaacc tcggcgtgtt caccgctcgg
     3721 ggcgtggagc tcgaccggct gctgcgccag ctgctcggcc gggagggcgg cttcacctcc
     3781 gggcgggacc ggagcttcca cttcggcacg ctggagcacg gcatcgtcgg catgatcagc
     3841 cacctgggcg ccatgctgcc ggtggcctgc gggctggccc tggccggccg gctctccggc
     3901 tcggaccggg tcgtggccgt cttctccggc gacggcggca ccagcgaggg cgacttccac
     3961 gaggcgctga acctggccgc cgtgtggcgt ctgcccgtgc tgttcgtggt cgagaacaac
     4021 ggctgggggc
//
LOCUS       DATGJT010000707         2725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1445123, whole genome shotgun sequence.
ACCESSION   DATGJT010000707 DATGJT010000000
VERSION     DATGJT010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445123"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VKX24_12275"
     CDS             complement(<1..845)
                     /locus_tag="VKX24_12275"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HLJ09305.1"
                     /translation="MTIVAAPAPPSAPADAPAPATATASGATPRPRRPHLHQVDVVRL
                     LTFAAVIGVHSIAFTEQPSNQAWSGVLMLLQFGREVFFALTGFVLVYSAGDRPLSART
                     FWRKRFPLIAVPYLAWSGIYTLFHIFGPLHDHLTWTTILWDLATGNSEYHLYFLLVSM
                     QLYLVFPLLLRFVRRTAQRPWPVLGVVGVLNTAWFAWLQYGHAPASWIGQLWPRAYEL
                     LPTYAVYVLIGCYAAVHLDHLDRVMTERRRTMLWVAALAALVAEVVFWVQVGGRDPRV
                     AAAVL"
     gene            982..1746
                     /locus_tag="VKX24_12280"
     CDS             982..1746
                     /locus_tag="VKX24_12280"
                     /inference="COORDINATES: protein motif:HMM:NF018031.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IucA/IucC family C-terminal-domain containing
                     protein"
                     /protein_id="HLJ09306.1"
                     /translation="MNARRADRLLDDPGVLAAAVRAFGAAAGAPEPAVAASLFVQAWA
                     VCVSRPVLAPLVAGRRVPDAAAANTVLVFDGGHRPVGAAAITPRFAALAGDVLAAGDP
                     WAELVEDDDALFAWARARMFDGHLAGVVGVLREVAPVGERLLWGNVAAAVAGGFAGLS
                     FRPDAAAAIGADRLRADAARLLDRPGSPTEGLASLFPVTQAGVTRLFVRRRTCCLRYR
                     LPDAPPTCLSCRLLPEPDRRRRITERLAPKSRGAGS"
     gene            1855..>2725
                     /locus_tag="VKX24_12285"
     CDS             1855..>2725
                     /locus_tag="VKX24_12285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008476374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HLJ09307.1"
                     /translation="MGGYVRSFEEIDRTQVALVGGKGAHLGELTRIEGSGVPAGFCIT
                     TDAYRRIVADTPAIGEALERLSGLEADDREAIGALRAEIRRSFATIVVPDDLAGAITD
                     AVARLGPEAACAVRSSATAEDLPSASFAGQHDSYLNVVGPAAILQSVSRCWASLFTER
                     AVAYRLRNGFDHRKVQMAVVVQRMLFPQAAGVLFTADPLTSNRKVVAVEAVLGLGERL
                     VSGLVNPDVYRVRDGEVVAATVAGEQRALTDGQVRRLERLGRRIEVHFGAPQDIEWCL
                     ADDDLHIVQTRPIT"
BASE COUNT          371 a          942 c         1050 g          362 t
ORIGIN      
        1 tggaggacgg cggccgccac ccgggggtcc cgtccgccga cctggaccca gaagacgact
       61 tcggcgacga gggcggcgag ggccgcgacc cagagcatcg tccgccgccg ctcggtcatg
      121 acccggtcga ggtggtcgag gtggacggcg gcgtagcagc cgatcagcac gtagacggcg
      181 taggtcggga gcagctcgta ggcccggggc cagagctgcc cgatccagct cgccggggcg
      241 tgcccgtact gcagccaggc gaaccaggcc gtgttgagga cgccgacgac gccgaggacg
      301 ggccaggggc gctgtgccgt ccgccgcacg aagcgcagca gcagcgggaa gaccaggtac
      361 agctgcatcg acaccagcag gaagtagagg tggtactcgg aattgccggt ggcgaggtcc
      421 cacaggatcg tcgtccacgt caggtggtcg tggagcgggc cgaagatgtg gaagagcgtg
      481 tagatgccgc tccaggccag ataggggacg gcaatgagcg ggaaccgctt gcgccagaac
      541 gtccgggccg acagcggccg gtcgccggcg gagtagacga ggacgaaccc ggtgagggcg
      601 aagaacacct cccggccgaa ctgcagcagc atgaggacgc cggaccaggc ctggttggac
      661 ggctgctcgg tgaaggcgat cgagtggacg ccgatcaccg ccgcgaacgt cagcaagcgg
      721 accacgtcga cctggtggag gtgaggccgg cggggccggg gggtggcgcc gctcgccgtc
      781 gcggtcgccg gcgccggcgc gtcggccggg gctgacgggg gcgcgggagc ggcgacgatc
      841 gtcatcgcag ggactatcgg gccccgacct ggcgatgcgg tgggacgttt ctgtcagtcc
      901 tctgtgaatc ggtttgcgcc attggcgccg ccggccggtg ctgtcatact taggtatgcc
      961 taagacagtt ggttagcgcc aatgaacgct cgccgggccg accggctcct cgacgacccc
     1021 ggcgtcctgg ccgcggcggt gcgggccttc ggcgcggccg ccggcgcccc ggagccggcg
     1081 gtggccgcct cgctcttcgt ccaggcgtgg gcggtttgcg tcagccggcc ggtcctcgcc
     1141 ccgctggtcg ccggccggcg ggtgcccgac gccgcggccg ccaatacggt gctggtgttc
     1201 gacggtggac accgcccggt cggggcggcg gcgatcacgc cccggttcgc cgccctggcc
     1261 ggcgacgtcc tggccgccgg ggatccgtgg gccgagctgg tggaggacga cgacgccctc
     1321 ttcgcctggg cccgggcccg gatgttcgac gggcacctgg cgggcgtcgt gggggtcctg
     1381 cgggaggtgg cgccggtcgg cgagcggctc ctgtggggca acgtggcggc ggcggtggcc
     1441 ggcggattcg ccgggctgtc gttccggccg gacgcggcgg cggcgatcgg cgccgaccgc
     1501 ctccgggccg acgccgcccg cctgctcgac cggcccggct caccgacgga gggcctggcg
     1561 tcgctcttcc ccgtgacaca ggccggtgtg acccggctct tcgtccgccg ccggacgtgc
     1621 tgcctgcgct accgcctgcc cgacgccccg ccgacgtgcc tgtcgtgccg cctgctcccc
     1681 gaacccgacc gccggcgccg gatcaccgag cgtctggcgc cgaaaagcag aggggcaggg
     1741 agctgacgct ccctgccact tccaacgtat accgcgctgg ggggcttgcg gcaagaccgg
     1801 ggtcgtgccg cacaatccac cgtccgaggg cccaaccctg atgggagtgg cgaaatgggc
     1861 gggtatgtgc ggagtttcga ggagatcgac cggacgcagg tcgcgctcgt cggcggcaag
     1921 ggcgcgcacc tgggtgagct gacgcggatc gagggcagcg gcgtgccggc cggcttctgc
     1981 atcacgaccg acgcctaccg gcgaatcgtg gccgacacgc cggcgatcgg cgaagcgctc
     2041 gagcgcctct cgggcctcga ggcggacgac cgggaggcga tcggcgcgct ccgcgccgag
     2101 atccgtcgct ccttcgcaac gatcgtcgtt cccgacgacc tggcgggggc gatcaccgac
     2161 gccgtcgccc gactcgggcc ggaagcggcc tgcgccgtcc ggtccagcgc cacggcggag
     2221 gacctgccgt cggcgtcctt cgccgggcag cacgacagct acctgaacgt cgtggggccg
     2281 gcggcgatcc tccagagcgt cagccgttgc tgggcctcgc tgttcacgga gcgggccgtc
     2341 gcctaccgcc tgcggaacgg cttcgatcac cggaaggtcc agatggccgt ggtcgtgcag
     2401 cggatgctgt tcccgcaggc ggccggcgtc ctcttcacgg ccgacccgct cacgtccaac
     2461 cggaaggtcg tcgcggtgga ggccgtcctc ggcctcgggg agcgcctcgt ctccggcctg
     2521 gtgaaccccg acgtctaccg ggtgcgggac ggcgaggtcg tggccgcgac cgtcgccggc
     2581 gagcagcgag cgttgaccga cgggcaggtg cggcgactgg agcggctcgg ccggcggatc
     2641 gaggtccact tcggtgcccc ccaggacatc gaatggtgcc tggccgacga cgacctccac
     2701 atcgtccaga cccggccgat cacca
//
LOCUS       DATGJT010000708         2331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_717214, whole genome shotgun sequence.
ACCESSION   DATGJT010000708 DATGJT010000000
VERSION     DATGJT010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717214"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..175
                     /locus_tag="VKX24_12290"
     tRNA            103..175
                     /locus_tag="VKX24_12290"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:136..138,aa:Ala,seq:cgc)
     gene            297..524
                     /locus_tag="VKX24_12295"
     CDS             297..524
                     /locus_tag="VKX24_12295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019816582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system CcdA family
                     antitoxin"
                     /protein_id="HLJ09308.1"
                     /translation="MARVNVYLPHELAAAARAAGINVSNLTQEAIRQELARRGTDAWL
                     DRVADLRPTRVSHHAALEAVHAARDELGESA"
     gene            517..912
                     /locus_tag="VKX24_12300"
     CDS             517..912
                     /locus_tag="VKX24_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020415979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HLJ09309.1"
                     /translation="MPEPLVVDASALVDLLLRNDVGIRVEFRLRGQELHAPAHLDAEV
                     LSALGRLHRDGERDDEQVAQRLDALATAPIERHPLSNLLAGAWTRRHTLRLVDGLYVE
                     LAEQLDATLLTTDGPLAAATDIAELITHP"
     gene            1313..2206
                     /locus_tag="VKX24_12305"
     CDS             1313..2206
                     /locus_tag="VKX24_12305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014442653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HLJ09310.1"
                     /translation="MRYHNFLSDTARWDGFVLRPGDIIVSPPAKCGTTWAQMICGLLI
                     FQTPEFDRPLDVISPWLDMLTRPRAEVVADLDAQSHRRFIKSHTPLDGLPAGAGVTYL
                     CVGRDPRDVAVSFAHHVDNLDPVAFFAAWVSTVQADGVVELPPPPAPLSGRDFLVSWV
                     EDATPPETAANSLWRTLYHLETFWAARDRDDVVLLHYEDLQADLPGEMRRLAGRLGID
                     VPEDRWPALVEAASFGAMRRRADVVVPDAQEHLWKSPVGFFHRGTSGQWREVFDADLL
                     ARYESRAATLAPPDLLAWLQR"
BASE COUNT          343 a          892 c          755 g          341 t
ORIGIN      
        1 gcgcagccgg agcgacctga ccaccaccct cctccaggcc cgcctgcagg ctgcgatcga
       61 gagcagtggc ggagccgccc tcgactaatc tgcagccggc cagggggtgt agctcagctg
      121 gcagagcgct acgttcgcaa cgtagaagtc ggcggttcaa atccgctcac ctccactcca
      181 actacaggtc agaggcgtct cctgagccgg cgttcctgag gaacacctgt cgttcctgac
      241 gaacgccggt tgcccgtccc gcgaggcact tggccagggg tgtgtaccat gtgcgcatgg
      301 cccgtgtgaa cgtgtacctc ccgcacgagc tggcggccgc cgcccgcgcc gctgggatca
      361 acgtttccaa cctcacgcag gaggcgatcc gccaggaact cgcccggcgc ggcaccgacg
      421 cctggctcga ccgggtcgct gacctccgac cgacccgggt ctcgcaccac gccgccctcg
      481 aggcggtaca cgccgcccgg gacgagctcg gcgaaagtgc ctgaaccgct cgtcgtcgat
      541 gcgtccgccc tcgtagatct tctccttcgc aacgacgtag gcatccgggt cgagttccgg
      601 ctgcgcggcc aggagctgca cgccccggcc cacctcgacg ccgaggtgct gtcggcactc
      661 ggccgccttc accgtgacgg cgagcgcgac gacgagcagg tcgcccagcg cctcgacgcg
      721 ctggccaccg cccccatcga acggcatccg ctgtcgaatc tcctcgcggg cgcgtggacg
      781 cgccgccaca ccctccggct ggttgacggg ctctacgtcg agctcgccga acagctcgac
      841 gccaccctgc tcacgaccga cggcccgctc gccgccgcga ccgacatcgc cgaactcatc
      901 acgcacccgt gagcagccaa cccatcggca gcggccgaaa tgccgttcct gctcgggtcg
      961 tgtccagcgg ccaggcccga gcgaatgcca gctcgcttgc ccactaccgg gcgatcacgt
     1021 ctccgccgcc acgcggccca tcgcgcgaat ttcgcgcgcc aaccgctgaa cgtcggtgca
     1081 cgggatcagg cactcatgga catcgaacca ggtcaggacg gctccaatgg ttctccctgc
     1141 gagtcactgg acccgtcggg tgagcctcgc aacgtagaac tcggcagttc aaatccgctc
     1201 acctccacca cacgtcgtcc tcgtcggccc cgggttcgta ccagggccgc gccggcgttc
     1261 cccatcggtg acgcgctggt ggcggacgac cccgcgtggc caagatggcg ccgtgaggta
     1321 ccacaacttc ctgagcgaca ccgcccggtg ggacggattc gtcctgcgcc ccggcgacat
     1381 catcgtcagc ccgccggcca agtgcggcac cacgtgggcg cagatgatct gcgggctgct
     1441 catcttccag acaccggagt tcgaccgccc gctcgacgtc atctccccct ggctcgacat
     1501 gctgacccgg ccccgggccg aggtggtggc ggacctcgac gcccaatcgc accgccgctt
     1561 catcaagagc cacaccccgt tggacgggct gcccgccggc gcgggcgtca cctatctctg
     1621 cgtcggacgc gatccccgcg acgtcgccgt gtcgttcgcc caccacgtcg acaacctcga
     1681 ccccgtggcg ttcttcgccg catgggtgtc gacggtccag gcggacgggg tggtcgagct
     1741 ccccccgccg cccgcgccgc tctccggccg cgacttcctc gtttcctggg tcgaggacgc
     1801 cacgccgccg gagacggcgg ccaactcgct gtggcggacg ctgtatcacc tggagacgtt
     1861 ctgggcggcc cgggaccggg atgacgtcgt gctcctccac tacgaggacc tccaggccga
     1921 cctgcccggc gagatgcgcc ggctggccgg ccgcctgggg atcgacgtcc cggaggaccg
     1981 ctggccggcg ctggtggagg cggcgtcgtt cggcgccatg cggcggcggg ccgacgtcgt
     2041 cgtcccggac gcccaggagc atctctggaa gagtccggtc ggcttcttcc accgcggcac
     2101 cagcggccag tggcgcgagg tcttcgacgc cgacctgctg gcccgctacg aaagccgggc
     2161 tgcgaccctc gccccgcccg acctgctcgc ctggctgcag cgttgagcga gcgccatcac
     2221 agtagggcgg cgagcagcgc gtccagggcg gccacggagt ggccgctcac gaaggcgtcg
     2281 acgtggggga gggcggcggc catcccggcc accttcggct cgtaggacgg a
//
LOCUS       DATGJT010000709         3795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_199617, whole genome shotgun sequence.
ACCESSION   DATGJT010000709 DATGJT010000000
VERSION     DATGJT010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199617"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            201..620
                     /gene="sodN"
                     /locus_tag="VKX24_12310"
     CDS             201..620
                     /gene="sodN"
                     /locus_tag="VKX24_12310"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase, Ni"
                     /protein_id="HLJ09311.1"
                     /translation="MPFISRLLAAADRISPPALAHAHCDLPCGVYDPAQARIEAESVK
                     AIQEKYQGNEDPVFRERCVQIKEERADLVKHHLWVLWTDYFKPPHLEKYPELHDLFWR
                     ATKAAGDAKKSLDPSQGEQLLGLIGEIDKIFWETKQG"
     gene            complement(635..877)
                     /locus_tag="VKX24_12315"
     CDS             complement(635..877)
                     /locus_tag="VKX24_12315"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HLJ09312.1"
                     /translation="MSRLVLFARARETAGRKADDIDASTLGELLERAVADYGPDFAAV
                     LDISRVWVNGNEPTDGLNTPVGPNDEVAVLPPVSGG"
     gene            complement(888..1739)
                     /locus_tag="VKX24_12320"
     CDS             complement(888..1739)
                     /locus_tag="VKX24_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018654015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HLJ09313.1"
                     /translation="MTAFRSEALGRSSPEREFKVDAARTVAYAAATNDGNPRHTGGEL
                     APPVFAVVPAWDVLTAAARLVAPDEAFAQLVHSEQDMRFVRPITPGDVLRSRAVPVYL
                     AVRGVGTTLAVRTETVDAGGALVNEQFVTLFFRGPFEGRSGGEAPPEHKLTAAAKAEP
                     PLAEVTYRFDADQTFRYAEASGDPLPIHLDDAVARSVGLPGIIVHGLCTMAFCGRAVI
                     ESLAGGDPTRLARLAVKFSRPVLPGQEITIRLYAVPGDEGAYGFEARDADGQAVVKDG
                     RAELRRG"
     gene            complement(1736..2092)
                     /locus_tag="VKX24_12325"
     CDS             complement(1736..2092)
                     /locus_tag="VKX24_12325"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HLJ09314.1"
                     /translation="MDPEHARQLIASEKERLEGLVREREAEGVGTQSETDQISELSSL
                     DQHQGDIGTETFEREKDFSLLEQLEAEIGDLDAALRKIDDGTYGTCEVCGRQIEAERL
                     EAMPGTRTCIEHAGAH"
     gene            complement(2124..2534)
                     /locus_tag="VKX24_12330"
     CDS             complement(2124..2534)
                     /locus_tag="VKX24_12330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09315.1"
                     /translation="MAQQCIWDDAAVTVPEDRPLVEVDHHTADLPPLPQRDRTIPAER
                     WVEAPPELRALGADIGEPLVVYKRRIGGWLLWRAGPPSRGDARYMALAADDPGRRFTF
                     RLFPDGSGTGEGPDGAVHSRFRSWKEALRDTPPA"
     gene            2533..3027
                     /gene="purE"
                     /locus_tag="VKX24_12335"
     CDS             2533..3027
                     /gene="purE"
                     /locus_tag="VKX24_12335"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004952290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HLJ09316.1"
                     /translation="MPTVGIVMGSATDLDVMRPAAEALDEFGISREVRVISAHRAPAD
                     AARYAEEAAGRGLRVIIAGAGGAAHLPGVLAASTSLPVIGVPVPLKALDGLDSLLSIV
                     QMPAGIPVATVSIGGARNAGLLAVRLLAASDEALRERMDAFRSQLTEKNREADAKARA
                     EFGA"
     gene            complement(3059..>3795)
                     /locus_tag="VKX24_12340"
     CDS             complement(3059..>3795)
                     /locus_tag="VKX24_12340"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HLJ09317.1"
                     /translation="EAEIPLDEASLLIAYHARPELDLGAELARLDDLAASCNPPTFDG
                     LVRRLFGDLGFHGNTEHYREPDNSYLDQVLRRRVGIPISLSVLTMEVGRRLGVAFDGV
                     GMPGHFLVRHRADPQTFLDPFGGGRRLDATGCREIFTALGGTAWSDDYLAPVGPRAIL
                     SRMLLNLQSLFLPSDLRSAAWVLQLRLAIPGVPVPDRLGLARALGTLGRFAAAAAELD
                     RVAEDLPDAEAATIRAESRALRARAN"
BASE COUNT          511 a         1361 c         1423 g          500 t
ORIGIN      
        1 caccgccacc aggtggcccg tccgcagccg gggtcggaac ggcccgaggc cggcgacgac
       61 gaggacccgg tcgccgggtc ggagcgtcgg cgtcatactc tcgccggtga cctccaggcg
      121 gcgcaggggc aagtggttca ccccactcgc gcaggggtag cctcggccag acgacccgac
      181 ccccggagga ggacgccagc atgccgttca tttcccgcct tctcgccgcg gccgaccgta
      241 tcagcccccc ggccctcgcc cacgcccact gcgacctccc ctgcggtgtc tacgacccgg
      301 cccaggcccg gatcgaggcc gagtccgtca aggccataca ggagaagtac cagggtaacg
      361 aggacccggt cttccgtgag cgctgcgtgc agatcaagga ggagcgggcc gacctcgtca
      421 agcaccacct gtgggtgctc tggacggact acttcaagcc gccgcacctc gagaagtacc
      481 ccgagctcca cgatctcttc tggcgggcca ccaaggccgc cggcgacgcc aagaagtcgc
      541 tcgacccgag ccagggcgag cagctgctcg gcctcatcgg cgagatcgac aagatcttct
      601 gggagaccaa gcagggctag agccgtcggc ggcgtcagcc gccgctgacc ggcggcagca
      661 ccgccacttc gtcgttgggg cccaccggcg tgttcagtcc gtcggtgggc tcgttgccgt
      721 tcacccacac ccggctgatg tcgaggacgg cggcgaagtc cgggccgtag tcggccacgg
      781 cccgctccag cagctccccc agggtcgagg cgtcgatgtc gtcagctttg cggccggccg
      841 tctcccgggc ccgggcgaag aggaccaacc ggctcatggg gtgcaggtta gccccggcgc
      901 agttcggccc ggccgtcctt caccacggcc tggccgtccg cgtcccgcgc ctcgaagccg
      961 taggcgccct cgtcgccggg gacggcgtag agccggatcg tgatctcctg gccggggagg
     1021 acgggccggg agaacttcac cgccagccgg gccagccggg ttgggtcacc cccggccagc
     1081 gactcgatca ccgcccggcc gcagaaggcc atcgtgcaca ggccgtggac gatgatcccg
     1141 ggcaggccga ccgaccgggc cacggcgtcg tcgaggtgga tcggaagcgg gtcgccggac
     1201 gcctcggcgt agcggaacgt ctggtcggcg tcgaagcggt aggtcacctc ggccagcggc
     1261 ggctccgcct tggccgccgc cgtgagcttg tgctccggtg gggcctcgcc gccgctccgc
     1321 ccctcgaacg gcccccggaa gaacagcgtg acgaactgct cgttgacgag ggcgccaccg
     1381 gcgtcgaccg tctccgtccg cacggccagg gtggtaccga cccctcgcac ggccaggtac
     1441 accggcaccg cccgggagcg gagcacgtcg ccgggggtta tgggccggac gaagcgcatg
     1501 tcctgctcgg agtggaccag ctgggcgaac gcctcgtccg gcgccaccag ccgggcggcg
     1561 gcggtgagga cgtcccaggc cgggactacg gcgaacaccg gcggtgccag ctcgccgccg
     1621 gtgtggcggg ggttgccgtc gttggtggcc gcggcgtagg cgaccgtccg ggcggcgtcg
     1681 accttgaact cccgctccgg gctggaccgg ccgagcgcct cggatcggaa cgccgtcaat
     1741 gggcgccggc gtgctcgatg caggtgcgcg tccccggcat cgcctcgagc cgctcggcct
     1801 cgatctgcct gccgcacacc tcgcaggtcc cgtaggtgcc gtcgtcgatc ttgcgcaggg
     1861 cggcgtcgag gtcgccgatc tcggcttcga gctgctcgag gagcgagaag tccttctccc
     1921 gctcgaaggt ctcggtcccg atgtcaccct ggtgctggtc gagcgacgac agctccgaga
     1981 tctggtcggt ctccgactgg gtgcccacgc cctcggcctc ccgctcccgg acgaggccct
     2041 ccaggcgctc cttctcgctc gcgatgagct ggcgtgcgtg ttcggggtcc atgtcgggga
     2101 gggtaccccg ctccggcggg cggtcacgcc ggcggcgtgt cccgcagggc ctccttccac
     2161 gaccggaacc ggctgtggac ggcgccgtcg gggccctcgc ccgtcccgct gccgtcgggg
     2221 aagaggcgga acgtgaagcg ccgccccggg tcgtcggcgg ccagggccat gtagcgggcg
     2281 tcgccccggc tgggcgggcc ggcccgccac agcagccagc cgccgatgcg gcgcttgtag
     2341 accacgagcg gttcgccgat gtcggcgccg agcgcccgca gctcgggcgg cgcctcgacc
     2401 cagcgctcgg cgggaatcgt gcggtccctc tgcggcaggg gcggcaggtc ggcggtgtgg
     2461 tggtcgacct cgaccagcgg gcggtcctcc ggaacggtca ccgcagcatc gtcccagata
     2521 cattgctggg ccatgccgac cgtgggaatc gtgatgggga gcgccaccga cctggatgtc
     2581 atgcgtccgg cggccgaggc gctcgacgag ttcgggatca gccgcgaggt ccgggtcatc
     2641 tccgcccacc gggcgccggc cgacgccgcc cgctacgccg aggaggcggc cgggcggggc
     2701 ctgcgggtca tcatcgccgg cgccggcggg gccgcccacc tcccgggggt gctggccgcc
     2761 tcgacgtcgc tgccggtgat cggcgtgccg gtgccgctga aggcgctcga cgggctggac
     2821 tcgctgctgt cgatcgtcca gatgccggcc gggatcccgg tggccaccgt gtcgatcggc
     2881 ggcgcccgca acgccgggct gctggccgtg cgcctgctgg ccgcctcgga cgaggcgctc
     2941 cgggagcgga tggacgcctt ccgttcgcag ctgacggaga agaaccggga ggccgacgcc
     3001 aaggcccggg cggaattcgg ggcgtagccc gccggccgtg tccggtgaac gctgaacgtc
     3061 agttcgcccg ggcccgcagc gcccgggact cggcccggat cgtggcggct tcggcgtcgg
     3121 gcagatcctc ggccacccgg tcgagctcgg ccgccgcggc ggcgaagcgg cccagcgtcc
     3181 cgagcgcccg ggccaggccg agccggtcgg gcaccggcac gcccgggatc gccaggcgga
     3241 gctgcaggac ccaggccgcc gaccggaggt ccgagggcag gaacaggctc tggagattga
     3301 ggagcatccg gctcaggatc gcccggggcc cgacgggggc gagatagtcg tcgctccagg
     3361 ccgtcccccc gagagcggtg aagatctccc ggcagccggt ggcgtcgagc cggcggccgc
     3421 cgccgaaggg gtcgaggaac gtctgcgggt cggcccgatg gcggacgagg aaatggcccg
     3481 gcatgccgac gccgtcgaac gccacgccga gacgccgacc gacctccatc gtgagcaccg
     3541 acagggagat cgggatcccg acgcggcggc ggaggacctg gtcgaggtag gagttgtccg
     3601 gctcccggta gtgctcggtg ttgccgtgga agccgagatc gccgaagagg cgccggacga
     3661 gcccgtcgaa ggtcggagga ttacagctgg cggccaggtc gtcgagccgg gccagctctg
     3721 cgccgaggtc tagctcgggc cgggcgtggt aggcgatgag gagggaggcc tcgtcgaggg
     3781 ggatctccgc ctcgg
//
LOCUS       DATGJT010000710         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1445203, whole genome shotgun sequence.
ACCESSION   DATGJT010000710 DATGJT010000000
VERSION     DATGJT010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445203"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..771)
                     /locus_tag="VKX24_12345"
     CDS             complement(142..771)
                     /locus_tag="VKX24_12345"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019926457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLJ09318.1"
                     /translation="MTNPAAPSPGAPAPRPPHDFDEIYATSTPPWDIGRPQPAFQRLA
                     EAGELVGRVLDVGCGSGEHALLAASFGHDTVGVDISSKAIELANAKAAGRDSQARFLV
                     FDALRLVDLGEQFDTVLDCGFFHILDDEERTRYVRSLTGAVSIDGRYHLLCFSDHQPG
                     DWGPRRMTQDEIRAAFSDRWEVLSIEPAVIDLTIDPQGALAWYAVARRS"
     gene            complement(835..1635)
                     /locus_tag="VKX24_12350"
     CDS             complement(835..1635)
                     /locus_tag="VKX24_12350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009948398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HLJ09319.1"
                     /translation="MGDDTWASTRLASQFADEAYASVKGYVRTYVMHEQLLEHLPPPP
                     ATVLDVGGGAGHQSFPLAQAGYDVTLLDPSEAMLDKARQRLSRLPTDAQRRVAFAQAD
                     GENADDAVHGRRFAAVLCHGVLGYLEHPESLIDQLCRCAAAGGVVSIMTANAKATAVQ
                     PALERRWEDALAAFDARSGIGVLGVRGRADTVEEVSELLQRGGVEPVRWYGVWLFVDW
                     LEFSGVELDPHDAERVAATAAVELEAARRDPYRQLSRVFHLVGRKGQG"
     gene            complement(1784..>2336)
                     /locus_tag="VKX24_12355"
     CDS             complement(1784..>2336)
                     /locus_tag="VKX24_12355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013415158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLJ09320.1"
                     /translation="AVQGTAIVVAMDMTSGLIDRLRTMAIARSAVLTGQVLASLIQTL
                     LSLAVVIGVAVALGFRPTAGPVEWLATIGMLALFALALVWLATALGLAAKSVETASNT
                     PMFLTLLPFLGSGFVPAATMPAGLRQFAEYQPFTPVTETIRGLLTGTPVGAHAIAAIA
                     WSVGVALVSYVWALRLYKRRQPR"
BASE COUNT          381 a          810 c          794 g          351 t
ORIGIN      
        1 gcgaccgaac ccaccctcat cgtcactggg gtggcggccg ctgatgtagc cgtcgaccga
       61 caccgccagt gcgctgaaca ctctgctcat cacgacaccc tgctcatgac gacaccctgc
      121 tcatgacgtg gaaccaggcc cctacgaccg tcgcgccacc gcgtaccagg cgagcgctcc
      181 ttgcggatca atggtgagat cgatgacggc gggttcgatc gagaggactt cccacctgtc
      241 ggagaaggcg gcccgaatct cgtcctgcgt catccggcgc ggcccccagt cgcctggctg
      301 gtggtcgctg aagcagagca ggtggtagcg gccgtcgatc gacaccgcgc cggtcaggct
      361 acggacgtac cgcgtgcgtt cctcgtcgtc gaggatgtgg aagaacccgc agtcgaggac
      421 cgtatcgaac tgctcaccga gatcgacgag ccggagcgcg tcgaacacga ggaaccgcgc
      481 ctgcgagtcc cgtccagccg ccttggcgtt ggccaactcg atggctttgg aggagatgtc
      541 gaccccgacg gtgtcgtggc cgaacgatgc cgccaaaagg gcatgctcgc cgctgccaca
      601 acccacgtcg agcaccctgc ccaccagctc cccggcctcg gcgaggcgtt ggaaagccgg
      661 ctgcggccgc cctatgtccc acggcggtgt ggaggtggcg tagatctcgt cgaagtcatg
      721 cggtggccgg ggtgcggggg cgccaggaga cggcgcggcg gggttggtca tgacgacgtg
      781 cctagcacgc cacttcggcg ccaccgcccc ccgacacgtg gccccgccgt ctcgtcaccc
      841 ctgtcccttg cggcctacga gatgaaagac gcgactgagt tggcggtagg ggtctcgtcg
      901 ggccgcttcg agctcgaccg ctgccgtcgc cgccacccgc tcggcatcgt gggggtcgag
      961 ttcgacgcca ctgaactcga gccagtcgac aaacagccat accccgtacc agcgcaccgg
     1021 ctcgacgccc ccgcgctgca ggagctcgct gacttcctcc accgtgtcgg ctcgcccccg
     1081 cacgcccagc accccgatcc cgctcctggc gtcgaacgcc gccagggcgt cttcccaccg
     1141 ccgttccagc gccggttgca ccgccgtcgc cttggcgttg gccgtcatga tcgagaccac
     1201 gccaccagcg gcggcgcacc gacagagctg gtcgatcaag gactcggggt gctcgaggta
     1261 gccgagcacg ccgtggcaca acaccgccgc aaagcgtcgt ccgtgcacgg cgtcgtccgc
     1321 gttctcgccg tcggcctgcg cgaaggccac ccgccgctgg gcatcagttg gcagccggga
     1381 cagtcgttgt cgagctttgt ccagcatcgc ctccgacggg tcgagcaagg tcacgtcgta
     1441 gcccgcctgg gccaggggga acgattgatg gccggcgcca ccgccgacgt cgagcaccgt
     1501 ggcgggaggc ggcggcaaat gctccagcag ctgctcgtgc atcacgtagg tgcgcacgta
     1561 cccctttacc gacgcatacg cctcatcggc gaattgggaa gccagcctgg tactggccca
     1621 ggtgtcatcg cccacgtcgt caggataccg agggcgcccg gggctctggc ctgcgggccc
     1681 cgaaggccgc aggactacga ggggccggcc ccgccatcac cgggaatgtt ccctgccctg
     1741 cgacgtgccg ccttcggcgt gcgtctgccc caagtgactg cgctcacctc ggctgccgtc
     1801 gcttgtagag gcgcaatgcc catacgtagg agaccagggc gactccgacg ctccatgcga
     1861 tggcggcgat ggcgtgggcg ccgacaggtg ttcccgtgag cagtccccgg atcgtctcgg
     1921 tgacgggagt gaacggttgg tactcggcga actgccgcag ccccgccggc atggtggcgg
     1981 caggcacgaa cccgctgccg aggaagggga gcagggtcaa gaacatgggc gtgttgctgg
     2041 cggtctcgac gctcttggcc gccaggccga gcgcggtggc gagccatacg agggcgagag
     2101 cgaacagtgc cagcatcccg atggtggcga gccattccac cggaccggcg gtgggccgga
     2161 agccgagtgc aacggcgaca ccgatcacga cggcgaggct gagcagggtt tggatgaggc
     2221 tggccaatac ctggccggtc aggacagcgg agcgggcgat tgccatggtg cggagccgat
     2281 cgatgagccc gctggtcatg tccatggcca ccacgatggc cgtgccctgg acggca
//
LOCUS       DATGJT010000711         4737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_409895, whole genome shotgun sequence.
ACCESSION   DATGJT010000711 DATGJT010000000
VERSION     DATGJT010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4737
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409895"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VKX24_12360"
     CDS             <1..240
                     /locus_tag="VKX24_12360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014985776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HLJ09321.1"
                     /translation="IPHEKWGETPCAVVTVEALGSISEDEVIDLCVRRLGSYKKPSAV
                     VLQTDPLPRTPVGKLARKVLREPYWEGVDRRVSGA"
     gene            complement(279..1745)
                     /locus_tag="VKX24_12365"
     CDS             complement(279..1745)
                     /locus_tag="VKX24_12365"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ09322.1"
                     /translation="MKAYLRGVSVFAAVVLTLTACGGGGSDTKRAASRPPGTGTSSSE
                     AAAPAGGDTASSAPAAPADASGAPAAGTSTGAPAGANSPAATPSGGPAQPSTGSGGAT
                     GSARAAGSGSSPAALSAAGPGDKTGVTQGDVLFGIHMPLSGPFGVLVGKGWYGTDAYF
                     RSVNDAGGVNGRKLKLVVADDKYSAQGAATAIRDLVDTKKVFAVACPVGVDQCSVTAD
                     YANSKGVPFLSGGFREQYLQDKPWAFPLTASYLYGGVRLLDYLFEKRGYTAKRKIGLL
                     WLHSQNLDEMGQAADRELARLTGGGKFAVRYPAEKDQSDFSAAVTRMHRAGVDTVWFH
                     TAPDLITKFAAQAKLLGYQPQYIFTLPVGGDIWAAAAGGNLDKGFGLAGFADPQWSGT
                     AKFQETFHRYYPNEQAHDFNLLCYVIGVVYVEGLKKAGPDLGRDSFARAMNTVEIDTG
                     ISQPISYSQRGRVGGPNSKFAVWEIHGTHTDQVTGFDF"
     gene            complement(2022..2825)
                     /locus_tag="VKX24_12370"
     CDS             complement(2022..2825)
                     /locus_tag="VKX24_12370"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ09323.1"
                     /translation="MAAPEQPGLGVYVWDNGWGEARRRLDLLEQAWDPQTWVSLHDLG
                     LQPGWCCLEVGGGGGSVVRWLCEAVGPDGRVVTVDIDTRFLEAIDAANLEVLRADVVT
                     DGLPDGPFDLIHTRAVLMHIPARDRLLAELVARLRPGGRLLLEEFDFHSMGASPSPAW
                     GAFWLDAADILNRAVGMDGTWARHLPRRLNSLGLCDVRARITTSLFRGGSPEAEFYRV
                     TWLQARDAVLGGGMPKEVFEDGMALLDDETQWLPGPANVTVSGRLPPLI"
     gene            complement(2899..3705)
                     /locus_tag="VKX24_12375"
     CDS             complement(2899..3705)
                     /locus_tag="VKX24_12375"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005463859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLJ09324.1"
                     /translation="MELAGKVAVVTGGASGIGRALCHRFAAEGASVVVSDVDAPGASV
                     VAQEVGGLAVPGDMAVESDVTGLVDAARLSYDRIDLFCANAGILWGVEPDDRSDVIGP
                     DAPDEAWERMWRVNFMSHVYAARHVVPVMLEQGAGHLLVTASAAGLLTVLGNAPYAVT
                     KHAAVAFAEWLSITYGDRGLGVSCLCPELVRTAMLAAAAEELSGAAAGADVIEPEDVA
                     AAVVEGLRDGRFLILPHPRVGEYFQRKAGDYDRWLAGMRRLQAQADARSG"
     gene            3739..4737
                     /locus_tag="VKX24_12380"
                     /pseudo
     CDS             3739..4737
                     /locus_tag="VKX24_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007528760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
BASE COUNT          672 a         1676 c         1718 g          671 t
ORIGIN      
        1 attccccacg agaagtgggg cgagacgccc tgtgccgtgg tcaccgtcga ggcgctcggg
       61 tcgatcagcg aggacgaggt gatcgacctc tgcgtccggc ggctcgggtc ctacaagaag
      121 ccgagcgccg tcgttctcca gacggacccg ttgccccgca ctccggtcgg gaagctggcc
      181 cgcaaggtgc tgcgggagcc gtactgggag ggcgtcgacc gccgcgtcag cggggcgtga
      241 cggcctcgcc ggggtcgccg gcgccgtcac gtcactccct agaagtcgaa ccccgtcacc
      301 tggtcggtgt gcgtcccgtg gatctcccac acggcgaact tggagttcgg cccgccgacg
      361 cggccgcgct ggctgtagct gatgggttgg gagatcccgg tgtcgatctc gacggtgttc
      421 atcgcccggg cgaacgagtc ccgcccgaga tccgggccgg ccttcttcag gccttcgacg
      481 tagacgacgc cgatgacgta gcagagcagg ttgaaatcgt gggcctgttc gttggggtag
      541 tacctgtgga acgtctcctg gaacttggcc gtgcccgacc actgcggatc ggcgaagccg
      601 gccagcccga agcccttgtc gaggttcccg cccgccgccg cggcccagat gtcgcccccg
      661 accgggagcg tgaagatgta ctgcggctgg tagccgagga gcttggcctg ggcggcgaac
      721 ttggtgatca ggtcgggggc ggtgtggaac cagacggtgt cgaccccggc gcggtgcatc
      781 ctggtgacgg cggcggaaaa gtcgctctgg tccttctcgg ccgggtacct gacggcgaac
      841 ttgccgcccc cggtcagccg ggccagctcc cggtcggcgg cctgtcccat ctcgtcgagg
      901 ttctgggagt ggagccacag cagcccgatc ttccgcttgg cggtgtagcc ccgcttctcg
      961 aacaggtagt cgagcaggcg gacaccgccg tagagatagc tggccgtgag cggaaaggcc
     1021 cacggcttgt cctgcaggta ctgctcccgg aatccgcctg agaggaacgg cacgcccttg
     1081 ctgttggcgt agtcggcggt gaccgagcac tggtcgacgc cgacgggaca agccacggcg
     1141 aagaccttct tggtgtcgac gaggtcgcgg atggcggtcg ccgcgccctg ggccgagtac
     1201 ttgtcgtcgg cgacgacgag cttgagcttc cggccgttga cccccccggc gtcgttgacc
     1261 gagcggaagt aggcgtcggt gccgtaccag cccttgccga cgagcacgcc gaaggggccg
     1321 gacagcggca tgtggatgcc gaagaggacg tcgccctggg tcacgcctgt cttgtcaccg
     1381 gggccggcgg cgctgagggc cgccgggctc gatcccgaac cggccgcccg cgccgacccc
     1441 gtcgcgccgc cggagccggt cgagggctgg gccggcccgc cggacggcgt tgccgcgggg
     1501 ctgttggcgc cggccggggc gcccgtcgag gtgccggcgg ccggcgcacc cgaggcatcg
     1561 gccggggccg ccggagcgga cgacgcggtg tcgccaccgg ccggggccgc cgcttcgctc
     1621 gaagaggtgc cggtgccggg cgggcgggac gccgcgcgct tggtgtcgct gccgcctccg
     1681 ccgcacgccg tcagggtcag gacgaccgcg gcgaagacgg agacgccccg caggtaggcc
     1741 ttcatcggcg tcctccctct cccggggccg acgagccgcc gcgctcgccg gggcccggga
     1801 attgaggtgt tggttctcga cgagttgggt ttcgtggcac ctgttccccc cgccgggcca
     1861 ggggaaaatg aatgtttcat caggcgccta tgcgccagca aggccaaggg acgcggcgcg
     1921 gaggaggcgg cacagccacg attcagggtg aacggcgatc cgggccatac tgccaatgta
     1981 gacgccgcgt ataactccta aagtggccgc cggcggggcg ttcaaatcag cggagggagc
     2041 cgcccgctca cggtcacgtt ggccggcccc ggcagccact gcgtctcgtc gtcgaggagc
     2101 gccatcccgt cctcgaagac ctctttcggc atgccaccgc cgagcacggc gtcccgggcc
     2161 tggagccacg taacccggta gaactccgct tccggggagc cgccccggaa gagcgacgtc
     2221 gtgatccggg cccggacgtc gcacagcccg agggaattga gccggcgggg gaggtggcgg
     2281 gcccaggtcc cgtccatgcc gaccgcccgg ttgaggatgt cggcggcgtc gagccagaaa
     2341 gcgccccagg ccggcgaggg cgacgccccc atcgagtgga agtcgaactc ctccagcagg
     2401 agccttccgc ccggccggag gcgggcgacg agttcggcca gcagacggtc ccgcgccggg
     2461 atgtgcatga ggacggcccg ggtgtggatc aggtcgaacg gtccgtcggg caggccgtcg
     2521 gtgacgacgt cggctcggag cacctcgagg ttggcggcgt cgatggcctc caggaaccgg
     2581 gtatcgatgt cgacggtgac gacgcgcccg tcggggccga ccgcctcgca cagccagcgg
     2641 acgaccgagc cgccgccgcc cccgacctcc aggcagcacc agcccggctg cagcccgagg
     2701 tcgtggagcg agacccacgt ctgcgggtcc cacgcctgct ccaggaggtc cagccggcgc
     2761 cgggcctccc cccacccgtt gtcccagacg tagacgccca gcccgggctg ctccggtgcc
     2821 gccatgaccc ctccctcgtc ggctctcacg gtagagagga gtggcgccgc ccgtccagag
     2881 tcgccgtcgg ccgccccctc agccggagcg cgcgtcggcc tgcgcctgca gccggcgcat
     2941 cccggccagc cagcggtcgt agtcgccggc cttgcgctgg aagtactcgc cgacgcgggg
     3001 gtgcgggagg atgaggaacc gtccgtcccg caagccctcg acgacggcgg cggcgacgtc
     3061 ctccggttcg atgacgtcgg ctccggcggc cgcgccgctc agctcctcgg cggccgcggc
     3121 gagcatggcg gtgcggacga gctccgggca gaggcacgag acgccgaggc cgcggtcgcc
     3181 gtaggtgatc gacagccatt cggcgaaggc gacggcggcg tgtttcgtga cggcgtaggg
     3241 ggcgtttccg agcacggtga gcaggccggc ggccgaggcg gtgacgagga ggtgcccggc
     3301 gccctgctcg agcatcaccg gcacgacgtg gcgggcggcg tagacgtggg acatgaagtt
     3361 cacccgccac atccgttccc aggcctcgtc aggggcgtcg ggcccgatga cgtcggaccg
     3421 gtcgtcgggt tcgacgcccc agaggatgcc ggcgttggcg cagaacaggt cgatgcggtc
     3481 atagctcagc cgggcggcgt cgacgaggcc ggtgacgtcg gactccaccg ccatgtctcc
     3541 cgggacggcg aggccaccga cctcctgggc caccaccgac gcccccgggg cgtcgacgtc
     3601 cgacaccacc accgacgccc cctcggcggc gaagcggtgg cacagcgccc gcccgatgcc
     3661 cgaggccccg cccgtcacca ccgccacctt cccggccagt tccacgccgg gcagtctacg
     3721 gacgccgact agcctccgat gaccgtggcc gagaacaacc tcctgcgcgc cgaggcggcc
     3781 gaacggggcg cctcctggcc gacctccact acgacgtcgt cctcgacctg acgggcgagg
     3841 acaccttccg cagcgagacc cgcctgcgat gccgcggctc cgaccccgga gcagagacct
     3901 tcctcgatgt caccgccgtg cgggtcgagt cggcgacggt caacggcgac gccgttccgg
     3961 ccggcgcctt cgacgccgat gccgggcggc tgcggatcgg cggcctggcg gcggagaacg
     4021 agatcgtcgt cgtggccgag cacgcctacg agcacaccgg cgtcgggctg caccgcttcg
     4081 tcgacccggt cgacggcgag gtctacctcc acacccagtt cgagccgttc gacgcccacc
     4141 gcgtcttcgc ctgttttgac cagcccgacc tcaaggcgac gttctccttc gaggtcgagg
     4201 ctccggccgg ctgggaggtc gtctccaacg gcgcggtggc cgaccggccc ggcgggggcg
     4261 ccggcggccg gtggcgcttc gccaccaccg agacgatgtc gacgtacgtc accgccctgg
     4321 tggccggccc ctaccactcc gtccaccggg ggcaccggga gataccgctg ggcctgtact
     4381 gccggcagtc gctggcgcag tacctcgacg ccgacgagat cttcgatgtc accggggcgg
     4441 ggttcgactt cttcgaggac gccttcggcc ggccctacgc cttcgggaag tacgaccagc
     4501 tcttcgtgcc ggagttcaac ttcggggcca tggagaacgc cggctgcgtc acgttctccg
     4561 agcgccacct gttccgctcc aaggtgacgg acgccgagcg ggagggtcgg gccgacacga
     4621 tcctccacga gatggcccac atgtggttcg gcgacctggt gacgatgcgg tggtgggacg
     4681 acctgtggct caacgagagc ttcgccacct tcgcctccta tctcgggctg gtggagg
//
LOCUS       DATGJT010000712         2608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_305106, whole genome shotgun sequence.
ACCESSION   DATGJT010000712 DATGJT010000000
VERSION     DATGJT010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305106"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..1243)
                     /locus_tag="VKX24_12385"
     CDS             complement(197..1243)
                     /locus_tag="VKX24_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012924388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HLJ09325.1"
                     /translation="MRAAIFNGPHSITVGQRPDPAIRLPTDAVVRVVLGCVCGSDLWY
                     YRGQSPHAVGSIGHEFIGIVEDIGSEVAGVACGDLVVAPFVYCDMSCPHCRAGMTSHC
                     VAGGSFGNGETDGGQGEAVRVPLAGSSLVPVPGSPSDLSEPTLRSLLALSDVMCTGHH
                     AAVCGRVEEGDTVAVVGDGAVGLSAVLASKRLGAERIIALSRNPVRQQVALEFGATDI
                     LAARGDEAVAAVLELTGGVGVDAALECVGTGESMATALAIARPGSTVGVVGAPHGVDV
                     PFEANFWRSVGWQGGVAPARAYIPELLDDVLRGAINPGRVFDYETNLDGIADAYAAMD
                     ERRAIKSLVRLGAL"
     gene            complement(1301..>2608)
                     /locus_tag="VKX24_12390"
     CDS             complement(1301..>2608)
                     /locus_tag="VKX24_12390"
                     /inference="COORDINATES: protein motif:HMM:NF015971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 130 protein"
                     /protein_id="HLJ09326.1"
                     /translation="ATLADLLNRFGGRHRNLEGIFARHFDVVASRIGSGRAVSGERRQ
                     LIGAYFTHEESPEGAALTNPSVVAHPDQDGLQPGELRFVLSLRAIGEGHVSGIEFRTG
                     VIGADRAIRIDRPSGFLTKARTRPTRYVRGLFEAQLEGLGPLGETSHQILEALGPAFD
                     RAELDGALSGLDRHALSRNPTRAMVERFGWVAANNYEVAFAEDSTIDERVLLPVGPTE
                     RHGMEDARFVRFLDEDGTATYLATYTAYDGAQLGPQLLATDDFRNFRVRQLSGPSARN
                     KGMAIFPRRIRGQFVSLSRWDRESNSLAVSDDLSTWGPPTPVQLPHQPWELIQIGNCG
                     SPIETPAGWLLLTHGVGPMRTYSIGATLLDSADPTRLIGSLTEPLLVPAPDEQDGYVP
                     NVVYTCGGLAHGDTLLLPYGFGDRAVGFATVDIPELLRRILDR"
BASE COUNT          417 a          887 c          944 g          360 t
ORIGIN      
        1 ccgctacgac gcaggggcgc tcggccggca agtcggggtc ggctagcgcc gggtcgcttt
       61 acttacgcct tcccgctggg gcaggaaggg gccactccaa ttctgtgtac attccaccgc
      121 gctatccgcg gtccaatgta cacagaaacg cgtcggtcgc cggtgcggcc gagctcctcg
      181 ctgctccagg ccgccatcag agcgcaccca ggcggaccag cgacttgatc gcgcgccgtt
      241 cgtccatcgc cgcgtaggcg tcggcgatgc cgtcgaggtt ggtttcgtag tcgaagacgc
      301 gtccgggatt gatcgcgcct ctgagcacgt cgtcgagcag ttcggggatg taggcccgag
      361 ccggcgcgac accaccctgc cagccgacgc tccgccagaa gttggcttcg aacgggacgt
      421 cgacaccatg cggtgcaccc acgacgccga ccgtcgagcc gggtcgggcg atggcgagcg
      481 cggtggccat cgattctcca gtgccgacac actcgagcgc ggcgtcgacg ccgacgccgc
      541 cggtcagttc gagcaccgcc gccacggcct cgtcgccccg cgcggccagg atgtcggtgg
      601 cgccgaactc gagggcgacc tgctgacgaa ccgggttccg gctcagcgca atgatgcgct
      661 cggcgccgag ccgcttggag gcgagaaccg ccgatagacc cacggccccg tcgcctacga
      721 ccgccacggt gtccccttcc tccacccggc cgcatacggc ggcgtggtgg ccggtgcaca
      781 tcacgtccga cagggccagg agtgagcgca aggtcggctc agaaaggtcc gagggtgacc
      841 ccggcaccgg gacaaggctg ctgccggcga gcgggacgcg taccgcctcg ccttgaccgc
      901 cgtcggtctc tccgttgccg aacgatccgc cggcgacgca atgcgacgtc atcccggccc
      961 ggcaatgggg acaggacatg tcgcagtaca cgaagggggc taccacgagg tcgccgcagg
     1021 cgacgccggc tacctcggag ccgatgtcct cgacgatgcc gatgaactcg tggccgatcg
     1081 agccgaccgc atgcggcgac tggccccggt agtaccagag gtcagagccg cacacacagc
     1141 cgagcaccac gcgtacgacg gcgtcggtcg gcaggcggat cgccggatcg ggccgctggc
     1201 cgaccgtgat cgagtgagga ccgttgaaga tcgctgcgcg catgggagta ctacaccacg
     1261 gaaccgggcc gggggggagc cgccagcagg gggcgcccgg ctacctatcg agaatgcggc
     1321 gcagcagctc ggggatgtcc acggtggcga agccgaccgc ccggtcgccg aacccgtagg
     1381 gcagcagcaa cgtgtcgccg tgcgccaacc ccccgcaggt gtagacgaca ttgggaacgt
     1441 agccatcctg ctcgtccggg gccgggacca gcagcggctc ggtcagggag ccgatcaggc
     1501 gggtggggtc cgccgagtcc aggagcgtcg ctccgatgct gtaggtgcgc atcggcccga
     1561 cgccgtgggt cagcagcagc cacccggccg gcgtctcgat cggggatccg cagttgccga
     1621 tctggatcaa ctcccacggc tggtgcggca gctgaacggg cgtcggaggt ccccaggtcg
     1681 acaggtcgtc ggacaccgcc agggagttgg attcgcggtc ccaccgggag aggctgacga
     1741 actggccgcg gatgcgacgg gggaagatgg ccatcccctt gttcctggcc gagggcccac
     1801 tcagctggcg gactcggaag ttcctgaagt cgtccgtcgc cagcagctga gggccgagct
     1861 gcgctccgtc gtaggcggta taggtcgcga ggtaggtcgc cgtgccgtcc tcgtcgagga
     1921 accggacgaa gcgcgcgtcc tccatcccgt gacgctcggt gggccccacc ggcagcagga
     1981 cacgctcgtc gatggtggag tcctcggcga acgccacctc gtagttgttg gccgcgaccc
     2041 agccgaagcg ttcgaccatc gcccgggtcg ggttgcgact gagagcgtgc cggtcgaggc
     2101 cggagagggc gccatcgagc tcggcgcggt cgaacgccgg cccgagtgct tcgaggatct
     2161 ggtgggaggt ctcgccgagg ggtcccaacc cctccaactg cgcctcgaac agcccccgca
     2221 cgtaccgcgt cgggcgggtg cgggccttgg tcaggaaccc ggacgggcgg tcgatgcgga
     2281 tggcccgatc ggcaccgatg accccggtcc ggaactcgat gccggagacg tggccctcgc
     2341 cgatggcgcg caggctcagg acgaagcgga gctcgccggg ttgcaggccg tcctggtcgg
     2401 gatgggcgac gacggacggg ttggtgagcg cggcgccctc gggcgactcc tcgtgcgtga
     2461 agtaggcgcc gatcaactgg cgacgctccc ccgacacggc gcggccggag ccgatccggg
     2521 aggcgacgac gtcgaagtgg cgggcgaaga tcccctccag gttgcggtgg cggccaccga
     2581 aacggttcag cagatcggcc agcgtcgc
//
LOCUS       DATGJT010000713         2319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_200014, whole genome shotgun sequence.
ACCESSION   DATGJT010000713 DATGJT010000000
VERSION     DATGJT010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200014"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..348
                     /gene="csrA"
                     /locus_tag="VKX24_12395"
     CDS             115..348
                     /gene="csrA"
                     /locus_tag="VKX24_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015327859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HLJ09327.1"
                     /translation="MLVLTRRANQSIMIGADVVVTVLEVRGDQVRIGIDAPRSVSVHR
                     EEVFRELEAANRAAASPKSGALEDLKGLRPPPR"
     gene            complement(359..979)
                     /locus_tag="VKX24_12400"
     CDS             complement(359..979)
                     /locus_tag="VKX24_12400"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HLJ09328.1"
                     /translation="MIYPADPLGAEGREAAQKALAAGLCVAVPTDTVYVLAVDPFVPG
                     AADRLFELLGRPREQDLPVLVASVWQALKLATAVPTAARRLMDRCWPGPLTLVLPRDP
                     EVAADLGDDDLTVGVRLPDHPVPQLLCRDVGPLAVATLATSGEPDFETAGELAEEFEE
                     DEVAVVLDGGRCHGLASTVVDGTGDDLHLIREGRLPWAEVLEAARA"
     gene            complement(976..1827)
                     /gene="prmC"
                     /locus_tag="VKX24_12405"
     CDS             complement(976..1827)
                     /gene="prmC"
                     /locus_tag="VKX24_12405"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR03534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HLJ09329.1"
                     /translation="MPATWLDVYATVAARLPAVEARWLVEDVSGVDRSRWTEAAPADA
                     PARLAPLVARRLAGEPLQYVLGRWSFRGLDLLVDPRVLIPRPETEIVAGAAIAEARRR
                     ASPCTVADLGTGSGAIALALAAEVPGAEVWATDASPAALEVARANLAAVPAEAASRVR
                     LAEGMWYEALPARLRGRLRVIVSNPPYVTEAEFATLPPEVRDHEPAGALVAGPTGREC
                     LEHLIAGGGRWLEPGGALVLEMAPGQAAALARAARAAGYEAVAVGADLAGRARVLVAR
                     RPSGAEA"
     gene            complement(1842..>2319)
                     /locus_tag="VKX24_12410"
     CDS             complement(1842..>2319)
                     /locus_tag="VKX24_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018252201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HLJ09330.1"
                     /translation="AATVAVLPEAEEVDVTIDPNDLQIDVYRSTGPGGQSVNTTDSAV
                     RITHRPSGIVVACQDEKSQLQNKDKAMRILRARLLQAEQQRQADELSSARRAQVGGGG
                     RSEKIRTYNFKENRVTDHRVGLTVHNLDGVLAGDLGQLLDALVEADRAAQLAGAAN"
BASE COUNT          291 a          860 c          885 g          283 t
ORIGIN      
        1 aaccgccaca cgcgggcggc ggcacaggcc gtgctgggca actccggcta cgccacccgg
       61 gaagtgctcg tctccggcgg ctagtttctc gacgttccac ggaaggagct ccccgtgctc
      121 gtcctgaccc gccgggccaa ccaaagcatc atgatcgggg ccgacgtggt cgtgaccgtc
      181 ctcgaggtgc ggggcgacca ggtccgcatc ggcatcgacg ccccccggtc ggtctccgtc
      241 caccgggagg aggtcttccg ggagctcgag gcggcgaacc gggcggcggc gtcgccgaag
      301 tccggggcgc tcgaggacct gaagggcctg cgaccgccgc cgcgctagac cgcggccctc
      361 aggcccgggc cgcctccagc acctcggccc acggcaggcg gccctcccgg atcaggtgca
      421 ggtcgtcgcc ggtcccgtcg accaccgtgc tcgccagccc gtggcagcgg ccgccgtcga
      481 ggacgacggc cacctcgtcc tcctcgaact cctcggccag ttccccggcc gtctcgaagt
      541 cgggctcgcc ggaggtggcg agcgtggcca ccgccagcgg cccgacgtcg cggcagagca
      601 gctgggggac gggatggtcg ggcagccgca cgccgacggt caggtcgtcg tcgccgaggt
      661 cggccgccac ctcggggtcc cgggggagca ccagcgtcag cggccccggc cagcagcggt
      721 ccatcagccg gcgggcagcg gtgggcacgg cggtggccaa cttcagcgcc tgccacaccg
      781 aggccacgag gaccggcagg tcctgctccc gggggcggcc gagcagctcg aagagccggt
      841 cggcggcgcc ggggacgaaa ggatcgacgg ccagcacgta gacggtgtcg gtggggacgg
      901 ccacgcacag gccggcggcc agggccttct gcgccgcctc ccggccttcg gcccccagcg
      961 gatcggcggg atagatcacg cctcggctcc cgacgggcgg cgggccacga ggacccgggc
     1021 gcggccggcg agatcggcgc cgacggccac ggcctcgtag cccgccgccc gcgccgctct
     1081 ggccagggcg gcggcctggc cgggcgccat ctccagcacc agggccccgc ccggttcgag
     1141 ccaccggccg ccgccggcga tgaggtgttc gaggcactcc cggccggtgg ggccggccac
     1201 gagggcgccg gccggttcgt ggtcgcggac ctccggaggg agggtcgcga actccgcttc
     1261 cgtcacgtag ggcgggttcg acacgatcac cctgagcctc cctcgcagac gggcgggtag
     1321 ggcttcgtac cacataccct cggccaggcg cacccgagag gcggcctcgg cgggcacggc
     1381 ggcgagattg gccctcgcca cctccagagc cgccgggctg gcgtcggtgg cccacacctc
     1441 ggctccggga acctcggcgg ccagcgccag ggcgatggcg ccgctgcccg tcccgagatc
     1501 ggcgacggtg cacgggctgg ctcgccggcg ggcctcggcg atggccgcac cggccacgat
     1561 ttcggtctcc ggccggggga tgaggacccg gggatcgacg agcaggtcga ggccccggaa
     1621 cgaccaccgc ccgagcacgt actgcagcgg ctcgcccgcc aggcgccggg ccaccagcgg
     1681 ggcgagacgg gccggggcgt ccgccggggc cgcctcggtc caccgcgacc ggtcgacgcc
     1741 gctcacgtcc tcgaccagcc accgggcctc cacggccggc agccgggcgg cgacggtggc
     1801 gtagacgtcc agccaggtgg ccggcacgac ggtggctcgg ttcagttggc cgctccggcc
     1861 agctgggcgg cccggtcggc ctcgacgagg gcgtcgagca gctggccgag gtcgccggcc
     1921 agaactccgt ccaggttgtg gacggtgaga ccgacgcggt ggtcggtgac ccggttctcc
     1981 ttgaagttgt acgtccggat cttctccgac cggcccccgc cgccgacctg ggcccggcgg
     2041 gcgctggaaa gctcgtcggc ctggcgctgc tgctcggcct ggaggaggcg ggcccggagg
     2101 atccgcatgg ccttgtcctt gttctggagc tggctcttct cgtcctggca ggcgacgacg
     2161 atgcccgacg gccggtgggt gatccgcacc gccgagtcgg tggtgttgac cgactgcccg
     2221 cccgggccgg tggagcggta gacgtcgatc tggaggtcgt tgggatcgat cgtcacatcg
     2281 acctcctccg cctcggggag gacggcgacg gtggcggcg
//
LOCUS       DATGJT010000714         3920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1445667, whole genome shotgun sequence.
ACCESSION   DATGJT010000714 DATGJT010000000
VERSION     DATGJT010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445667"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /gene="secF"
                     /locus_tag="VKX24_12415"
     CDS             complement(<1..1003)
                     /gene="secF"
                     /locus_tag="VKX24_12415"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HLJ09331.1"
                     /translation="MSLRTQVSDILHERTNYDFIGPTKKWFALSGAVIIIGMAALFTR
                     GLDFGIDFKGGTAWQVTVHGKSATTNGARDAAKSAGLTEPSIQILGRSQARVESKRAT
                     PDEQTKVAEALAKYANAKPTDVSINDVGPTWGGEVSHKAIRALVFFFVAIAIYLSLRF
                     EPKMAIAAIVAVVHDILVTVGAYAVTGFEVSPATVIAFLTILGFSLYDTVVVFDKVEE
                     NVTGIGATGRETYSGVVNRSMNEVLMRSLNTSFVAVLPVFSLLFVGAYLFGAVTIKDF
                     SLALFIGLMSGAYSSIFVATPILALLKEREPRYAAIRQKLAGRASIVAAPAYATAGVG
                     "
     gene            complement(1000..2562)
                     /gene="secD"
                     /locus_tag="VKX24_12420"
     CDS             complement(1000..2562)
                     /gene="secD"
                     /locus_tag="VKX24_12420"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HLJ09332.1"
                     /translation="MRRHALQLTLAIAIVLVPLAAVIASNTTPQLGLDLQGGISVVLA
                     PKAGTNVKSDTLGQAVNIIRNRVDSLGVAEPDVSRQGNDIIVDLPGVKNQQQALDIVG
                     QTAELRFRPVLGSLPPESSSVTTTTAPGATTTTASGASTSSTAQKGEVLDAQATTTSA
                     PATTATTAKAGTAATTPTTAPATTTTTQNLQNVPTTPDTPGQNVVLPIRKGSDNGGNR
                     LSLGPELMTGKDVKSADARFESGTGWDVHLSFTSDGFSKFNKIAAQYYQKQIAIVLDG
                     VVQSYPTIQSNNFTSNDVVISGNFKESEAKSLALVLRYGALPVALERQTVQEVSPSLG
                     KDQLRSGIFAGLLGLGLVALYMLLYYRLLGMVIWAGLLMSAGALYALTCWLGSSIGLT
                     LTLSGVTGIIVSVGITVDSYVVYFERLKDEVRSGKTIRSSLDRGFARSFRTILAADLV
                     SLIAAALLYWLAVGSVRGFAFFLGLSTLLDVFVSYFFMHPLVSIIGRKETFTQAGWLG
                     IASGLDAKGATA"
     gene            complement(2564..2815)
                     /gene="yajC"
                     /locus_tag="VKX24_12425"
     CDS             complement(2564..2815)
                     /gene="yajC"
                     /locus_tag="VKX24_12425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HLJ09333.1"
                     /translation="MPALIWTIVMLGAFYALLIRPQRRTMAAHQALMAELHEGDEVMT
                     MGGIFGRISRLDDDILDLEVSPGTTVRVAKSAISRKVEN"
     gene            complement(2949..>3920)
                     /gene="ruvB"
                     /locus_tag="VKX24_12430"
     CDS             complement(2949..>3920)
                     /gene="ruvB"
                     /locus_tag="VKX24_12430"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HLJ09334.1"
                     /translation="PRRLAEFVGQPALREHLEIMLGAARRRGQAVDHILLAGPPGLGK
                     TSMAGIVAAEMEVGFRVTSGPALERSGDLAAILTNLDEGDVLFIDEIHRLPRVVEEVL
                     YPAMEDFCLDIVIGKGPSARSIRLDLPRFTLVGATTRTGLVTGPLRDRFGFVARLDYY
                     DDADLEAIVVRAARILGVGLRPEGAAEIAARSRGTPRIANRLLRRVRDFAEIRADGVV
                     TGPVAREALRLFEVDERGLDKVDRGILSALCRTFGGAPVGLSTLAVSVGEEPETVEDV
                     YEPYLLKEGFLQRTPRGRVATAAAFAHLGVALPADRAGPDAVPLFEG"
BASE COUNT          603 a         1287 c         1457 g          573 t
ORIGIN      
        1 cgccgacgcc ggccgtggcg taggcggggg cggccacgat cgacgcccgc ccggccagct
       61 tctggcggat ggcggcgtag cggggctccc gctccttcag cagggcgaga atcggcgtgg
      121 ccacgaagat cgacgagtag gcccccgaca tcaggccgat gaacagcgcc agcgagaagt
      181 ccttgatcgt gacagcgccg aagaggtacg ccccgacgaa gaggagcgag aagaccggca
      241 gcacggccac gaacgaggtg ttgagcgacc gcatcagcac ttcgttcatc gaccggttca
      301 ccaccccgga atacgtctcc cggcccgtcg cgccgatgcc ggtgacgttc tcctccacct
      361 tgtcgaagac cacgacggtg tcgtagagcg agaaaccgag gatggtgagg aaggcgatga
      421 cggtggccgg cgagacctcg aaaccggtga cggcgtaggc cccgacggtg acgaggatgt
      481 cgtggaccac cgccacgatg gcggcgatgg ccatcttcgg ctcgaagcgc agcgacaggt
      541 agatggcgat ggccacgaag aagaacacca gcgcccggat ggccttgtgg ctgacctcgc
      601 cgccccacgt cggcccgacg tcgttgatgc tcacgtcggt cggcttggca ttggcgtact
      661 tggccagggc ctcggcgacc ttggtctgct cgtcgggcgt ggcccgcttg gactccaccc
      721 gggcctggga gcggccgagg atctggatcg acggttcggt gagccccgcg ctcttggcgg
      781 cgtcgcgggc gccgttggtg gtggcgctct tgccgtggac cgtgacctgc caggcggtgc
      841 cgcccttgaa gtcgatgccg aagtccaggc cccgggtgaa cagggccgcc atgccgatga
      901 tgatgaccgc gcccgagagg gcgaaccact tcttcgtcgg gccgatgaag tcgtagttgg
      961 tccgctcgtg gaggatgtcg gagacctgag tgcggaggct cacgccgtcg cccccttggc
     1021 gtcgagaccg gaggcgatgc ccagccaccc ggcctgtgtg aacgtttcct ttcggccgat
     1081 gatgctgacc agcgggtgca tgaagaagta cgacacgaac acgtcgagca gcgtcgacag
     1141 gccgaggaag aaggcgaagc cccgcaccga gcccacggcc agccagtaga ggagggcggc
     1201 ggcgatgagc gagacgaggt cggcggccag gatcgtgcgg aacgaccgcg cgaagccgcg
     1261 gtcgagcgag gagcggatcg tcttgccgct gcgcacctcg tctttgaggc gttcgaagta
     1321 cacgacgtag gagtcgacgg tgatgccgac ggagacgatg atgcccgtca ccccggacag
     1381 ggtcagcgtc agcccgatcg acgatccgag ccagcaggtg agggcgtaga gggccccggc
     1441 cgacatcagc agcccggccc agatcaccat gcccagcagc cggtagtaga ggagcatgta
     1501 gagggcgacg aggccgaggc cgaggagccc ggcgaagatg ccggagcgca gctggtcctt
     1561 cccgaggctg ggcgacacct cctgcaccgt ctggcgctcc agggcgaccg gcagggcacc
     1621 gtagcggagc accagagcca ggctcttggc ctcgctctcc ttgaagtttc cgctgatcac
     1681 cacgtcgttg gacgtgaagt tgttgctctg gatcgtgggg taggactgca cgaccccgtc
     1741 gagcacgatg gcgatctgct tctggtagta ctgggcggcg atcttgttga acttggagaa
     1801 gccgtcgctg gtgaacgaga ggtggacgtc ccaccccgtc ccgctctcga agcgggcgtc
     1861 ggccgacttc acatccttcc ccgtcatcag ctcgggcccg agcgacaggc ggttcccgcc
     1921 gttgtcgctg cccttcctga tcggcaggac gacgttctgg ccgggggtgt cgggggtcgt
     1981 cggcacgttc tggagattct gggtggtggt cgtcgtggcg ggcgccgtcg tgggggtggt
     2041 ggccgccgtc cccgccttgg ccgtcgtcgc cgtcgtggcc ggggccgagg tcgtcgtggc
     2101 ctgggcgtcg agcacctcac ccttctgggc cgtcgacgac gtcgacgcgc cggaggcggt
     2161 cgtcgtcgtg gcgccggggg cggtggtggt cgtgaccgag gacgactccg gcggcaggct
     2221 gccgaggacg ggccggaacc ggagctcggc agtctggccg acgatgtcga gcgcctgctg
     2281 ctggttcttc acgccgggga ggtcgacgat gatgtcgttc ccctggcggc tgacgtcggg
     2341 ctccgccacg ccgagcgagt cgacccggtt gcggatgatg ttcaccgcct ggccgagcgt
     2401 gtcggacttc acgttcgtgc cggccttggg agcgagcacg accgagatgc ccccctggag
     2461 gtccaggccg agctgcggcg tcgtgttgga cgcgatcacc gcggccagcg ggacgaggac
     2521 gatggcgatg gccagcgtca gctgcagagc atgacggcgc acgtcagttc tcgaccttcc
     2581 gtgagatggc cgacttggcg acccgaacgg ttgtccccgg gctgacctcg agatcgagga
     2641 tgtcgtcgtc gagccggctg atgcggccga agatcccgcc catcgtcatc acctcgtcgc
     2701 cctcgtggag ttcggccatc agcgcctggt gggcggccat ggtccggcgc tggggacgaa
     2761 tgaggagcgc gtaaaaggcg ccgagcatca cgatcgtcca aatgagggct ggcactgcgc
     2821 gggctcccgg atctaccggt cgggggaagc ttggatcgta ccgcgggagt tcgcccgacc
     2881 cggctcatgc ccgcccctgg cgcggcattt gcgcagttcg cggccggtgc gggagccccg
     2941 ccggccggtc aaccctcgaa cagcggcacg gcgtcggggc cggcgcgatc ggcggggagg
     3001 gcgaccccga ggtgggcgaa ggccgccgcc gtggccaccc ggccgcgggg cgtccgctgg
     3061 aggaagccct ccttcaacag atacggctcg tagacgtcct ccaccgtctc gggctcctcg
     3121 ccgacggaga cggccagcgt cgacagcccc accggggcgc cgccgaacgt ccggcagagg
     3181 gcgctcagga tgccgcggtc gaccttgtcg agcccccgct cgtcgacctc gaacagccgg
     3241 agggcctccc gggccaccgg gccggtgacg acgccgtcgg cccggatctc ggcgaagtcg
     3301 cgcacccggc gcaggaggcg gttggcgatg cggggcgttc cccgggagcg ggcggcgatc
     3361 tcggccgccc cctccggccg caggcccacg ccgaggatcc gggccgcccg gacgacgatg
     3421 gcctcgagat cggcgtcgtc gtagtagtcg agccgagcga cgaagccgaa ccggtcgcgc
     3481 agcgggccgg tgacgaggcc cgtccgggtg gtggcgccga cgagcgtgaa acggggcagg
     3541 tcgagccgga tggaccgggc cgagggcccc ttgccgatca cgatgtcgag gcagaagtcc
     3601 tccatggccg ggtagaggac ctcctccacc acccggggga ggcggtggat ctcgtcgatg
     3661 aagaggacgt cgccctcgtc gagattggtc aggatggcgg cgaggtcccc cgaccgctcg
     3721 agggccggcc cgctggtgac ccggaacccg acctccatct ccgccgccac gatgcccgcc
     3781 atcgaggtct tcccgaggcc ggggggcccg gccagcagga tgtggtcgac ggcctggccc
     3841 cgccggcggg cggcgccgag catgatctcg aggtgctccc gcagcgccgg ctggccgacg
     3901 aactcggcga gccggcgggg
//
LOCUS       DATGJT010000715         4981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_717971, whole genome shotgun sequence.
ACCESSION   DATGJT010000715 DATGJT010000000
VERSION     DATGJT010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4981
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717971"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1432)
                     /locus_tag="VKX24_12435"
     CDS             complement(<1..1432)
                     /locus_tag="VKX24_12435"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HLJ09335.1"
                     /translation="MDPVSRRRRAGPDRLLFPTLRRYQAGWVGADVLAGLTLVAIAVP
                     EQMATSRLAGMPPAAGLYAFLAGSLVFAVLGRSAHLSVGADSTIAPVMAAGVAALGVS
                     GTARYGELISFLALMVGALVVVVGLLRLGWIAEFLSTPVITGVLGGIAVQIVVRQLPA
                     VLGLAGGGSTTFGRLRMVAGHLGRTNGWAVAIAVGVFVVIMGAEHLDRRIPGALIGLV
                     TSIALSGAFDLTSHGLAVIGSIHGGLPSFAVPSAAWSDGRDLLGPALTVAFLCIAQTA
                     ATMGASGGASTSFADFDRDLVAVGVGSLVAGLSGSFAVNTSPPRSEIVAASGGRSQAT
                     GLVAAAVVVLVMLVATGLLRELPEATLGAILVFVATRLFRIGDLRSILRFDRIEFGLA
                     VVTLLAVAVVGIEQGVVLAMLLSLAERTRRTARPRDAVLGRVPGTDHWIPNDVGRPTE
                     SVPGIVVYLVYAPLWYGNAAYVADRLR"
     gene            1538..3139
                     /locus_tag="VKX24_12440"
     CDS             1538..3139
                     /locus_tag="VKX24_12440"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007668295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ09336.1"
                     /translation="MDAVVVGAGFAGLYMLHRLRGLGLSAVVYERAAGVGGTWYWNRY
                     PGARCDVESLHYSYSFDPDLEREWDWTERYAAQPEILAYLNHVADRFDLRRDIRFETT
                     VRSATFDETAHGWRLDVDPGGTTTCRFLILATGCLSDAQVPPIPGLESFAGRWYHTGN
                     WPHEGVDFTGQRVAVIGTGSSGIQSIPIIAAQAEHTYVLQRTPNFSIPARNGPLDPRV
                     LKETQENYAVVREAIRRSPLYFPVNFDPRGTMGVPDDEFRSIIENRWEGGGLGIAATF
                     ADILMSEQAAERVAGVVREKIRAKLDDPAVAERLIPTSYPFAAKRLCLDTGYFETFNR
                     DDVTLVDLRDGPITGIVPAGVATEQGTIEVDAIVFATGFDAMTGSILRIAITGRGGLT
                     IQEKWAGGPVTYLGLAVHGFPNLFTITGPGSPSVLSNMVPSIEQHVDWIADCLAHLAD
                     HGVDVIEAEAAAEREWTDQVHALGDMTIFPKANSWYMGRNIEGKPVGFMPFVGGTVLY
                     RQICDGIAESGYPGFNLGARVNQPA"
     gene            3161..3418
                     /locus_tag="VKX24_12445"
     CDS             3161..3418
                     /locus_tag="VKX24_12445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09337.1"
                     /translation="MADDEAEPGPEPDPEPEGRRRPERRADTEKAIGLEVARLFGLSP
                     QTLAAPRARRPEPEAPAEPAAPTEPAAATEPEAPTDLAGEG"
     gene            3551..4804
                     /locus_tag="VKX24_12450"
     CDS             3551..4804
                     /locus_tag="VKX24_12450"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HLJ09338.1"
                     /translation="MIDRRELLARLAAGAAAIGTAGIASRLTGTPAGAANAPPDSPTP
                     PAAALRTRLTERYGVAYPIVQAGMAFYATPALAAAVTNAGGLGVLGPVPEAPEGVRRQ
                     IHETRRLTKGPFGVDYVYFPFFNKTAYSPGYEADGEHPTRNFTWSITDAHIDVLVDEK
                     VDFVVWYWTAPEARWIKRLKQAGIPQWTQVGSVEGAREAVAYGAEVIIAQGKQGGGHA
                     RGFQDGNPLHRSELVPLVRNAVPKDVLVIGSGGIADGRTLANALAEGADAGWVGTRFA
                     VSRESYAHEEYMRRVIAVTDGWKETTPTAIFGPEFPQVYTRSIVNRVLAEWKGKEDKI
                     PTPPPPPAVVGTARLQPWSVEGGIPYAMPKFSVIIPTRDSTGDFDEMCLLAGAESAPL
                     VKSVKPAADIVAEMAAEAARIRSGG"
     gene            complement(4788..>4981)
                     /locus_tag="VKX24_12455"
     CDS             complement(4788..>4981)
                     /locus_tag="VKX24_12455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09339.1"
                     /translation="AVEAGRARPPGAEPEPTDRPRGTPPAEEELPPVPRHLKFLGVAM
                     VIYLGYRFAQGVEWVIHRF"
BASE COUNT          795 a         1826 c         1750 g          610 t
ORIGIN      
        1 gccgcagccg gtcggcgacg taggcggcgt tgccgtacca cagcggggcg tagaccaggt
       61 agacgacgat gccgggcacg ctctcggtgg gccggcccac gtcgttcggt atccagtggt
      121 cggtgccggg cacccggccg aggacggcgt cccgggggcg agcggtccgc cgcgtccgct
      181 cggcgaggga cagcagcatg gcgaggacga caccctgctc gatcccgacg acggccacgg
      241 cgagaagggt gacgacggcc aggccgaact cgattcgatc gaagcgcagg atcgaccgga
      301 gatcgccgat ccggaacagg cgggtggcca cgaagacgag gatggcgccg agcgtcgctt
      361 ccgggagttc gcgcaggagt ccggtggcca cgagcatgac caggacgacg acggcggcgg
      421 ccaccaggcc ggtggcctgc gagcggcctc ccgacgcggc gacgatctcg ctgcggggcg
      481 ggctggtgtt gacggcgaac gagccactca gcccggcgac gaggcttccg acgccgaccg
      541 ccaccaggtc gcggtcgaag tccgcgaaac tcgtgctcgc cccgcccgag gcgcccatgg
      601 tggccgccgt ctgcgcgatg cagaggaagg cgacggtgag ggccgggccg aggagatccc
      661 ggccgtccga ccaggccgcc gacggcacgg cgaacgacgg cagaccaccg tggatcgaac
      721 cgatcaccgc caggccgtgg gacgtgagat cgaaggcgcc ggagagtgcg atcgaggtga
      781 ccagtccgat cagcgcgccg ggtatgcggc gatccaggtg ctcggctccc atgatgacga
      841 cgaacacgcc gacggcgatg gcgaccgccc agccgttggt ccggccaaga tgtcccgcca
      901 ccatccgcag ccggccgaac gtcgtcgatc ctccgcccgc caaccccagc acggcgggca
      961 gttgccggac gacgatctgg accgcgatcc cgcccaggac gccggtgatc accggcgtcg
     1021 agaggaactc ggcgatccat ccgaggcgca gcaggccgac cacgacgacc agcgccccta
     1081 ccatcagcgc cagaaacgag atcagctctc cgtagcgggc cgtgcccgac acgccgagcg
     1141 ccgcgacccc cgccgccatg accggggcga tggtcgaatc ggcaccgacc gagaggtggg
     1201 cgctccgccc caggaccgcg aacaccagcg acccggccag gaaggcgtag agcccggccg
     1261 ccggaggcat gccggccagg cgggacgtcg ccatctgctc cggaacggcg atggccacga
     1321 gcgtcaaccc cgccaggacg tcggctccca cccaccccgc ctggtagcgg cgcagagtcg
     1381 gaaagagcag ccggtcaggg cccgcccgtc gtcgccgcga gacaggatcc atgcggtggc
     1441 cgaggctact tccctcctcg gatcagacgg gacggtggcc ggtaggctct ggggcatggc
     1501 agaggaaacg tcgatgtctt ccgacgcccg agcaagcgtg gatgcggtcg tcgtcggcgc
     1561 gggcttcgcc gggctctaca tgctgcaccg gctccggggc ctcggcctgt cggccgtggt
     1621 ctacgagcgg gcggcggggg tcggggggac gtggtactgg aaccgctatc ccggcgcccg
     1681 ctgcgacgtc gaatcgctcc actactccta ctccttcgac cccgacctgg agcgggagtg
     1741 ggactggacg gagcgctacg ccgctcagcc cgagatcctc gcctacctca accacgtggc
     1801 cgaccggttc gacctgcggc gcgacatccg gttcgagacc acggtccgtt ccgccacctt
     1861 cgacgagacg gcccacggct ggaggctgga cgtcgacccc ggcgggacga cgacgtgccg
     1921 gttcctgatc ctcgccaccg gctgcctgtc cgacgcccag gtgccaccga tccccgggct
     1981 cgaatcgttc gccggccgct ggtaccacac cggcaactgg ccccacgagg gcgtcgactt
     2041 caccggccag cgggtggcgg tgatcggcac cggctcgtcg ggcatccagt cgatcccgat
     2101 catcgccgcc caggccgagc acacctacgt cctccagcgc acgccgaact tcagcattcc
     2161 cgcccgcaac gggcccctcg acccccgggt gttgaaggag acgcaggaga actacgccgt
     2221 cgtgcgggag gcgatccgcc ggtcgccgct ctacttcccg gtgaacttcg acccccgggg
     2281 gacgatgggc gtccccgacg acgagttccg ctccatcatc gagaaccgct gggagggcgg
     2341 cggcctcggc atcgccgcca ccttcgccga catcctgatg agcgagcagg ccgccgagcg
     2401 cgtggccggc gtcgtccggg agaagatccg ggccaagctc gacgaccccg ccgtggccga
     2461 gcggctgatc cccaccagct accccttcgc cgccaagcgg ctctgcctcg acaccggcta
     2521 cttcgagacc ttcaaccggg acgacgtcac gctcgtcgac ctgcgggacg ggccgatcac
     2581 cgggatcgtc ccggcgggcg tcgccaccga gcaggggacg atcgaggtcg acgccatcgt
     2641 cttcgccacc ggtttcgacg ccatgaccgg ctcgatcctc cgcatcgcca tcaccggccg
     2701 gggcgggctg accatccagg agaagtgggc cggcggcccg gtcacctatc tcggcctggc
     2761 ggtgcacgga ttccccaacc tgttcacgat caccgggccg gggagcccgt cggtgctgtc
     2821 gaacatggtc ccgagcatcg agcagcacgt cgactggatc gccgactgcc tcgcccacct
     2881 cgccgatcac ggcgtcgacg tgatcgaggc cgaggccgcc gcggagcggg aatggaccga
     2941 ccaggtccac gccctcggtg acatgacgat cttccccaag gccaactcct ggtacatggg
     3001 tcgcaacatc gaaggaaagc ccgtcgggtt catgcccttc gtcggcggga cggtcctcta
     3061 ccgccagatc tgcgacggca tcgccgagag cggctatccg ggcttcaacc tcggagcccg
     3121 ggtcaaccag cccgcctgaa ccggccggag aggacgagac atggctgacg acgaggcgga
     3181 gcccggaccg gagcccgacc ccgagcccga gggccggcgg cggccggagc ggcgggccga
     3241 cacggagaag gcgatcggac tcgaggtggc gaggctcttc ggtctgtcgc cgcagacgct
     3301 ggcggcgccc cgggccaggc ggccggagcc cgaagcgccg gccgagcccg cagcgccgac
     3361 cgagcccgca gcggcgaccg agcccgaagc gccgacggac ctcgcgggcg agggctgaac
     3421 caggcgccct ccgtccttga catcgctgct tccccggcgt taaatccggt tagtcgaccg
     3481 tgtggtcggt gaatcgggcg ggccggccga ttcggggagc cgcaccgctc accgggggga
     3541 gggcgtcatc atgatcgacc gccgcgagtt gttggcgcgc ctggccgccg gcgccgccgc
     3601 catcgggacg gcgggaatcg ccagccgtct gaccggtacg ccggccgggg cggccaacgc
     3661 gccgccggac agcccgacgc cgccggcggc ggcgctgcgc acccgcctca ccgagcgcta
     3721 cggcgtcgcc taccccatcg tccaggccgg catggcgttc tacgccactc cggcgctggc
     3781 ggcggcggtg accaacgccg gagggctcgg cgtcctgggg ccggttcccg aggcccccga
     3841 aggcgtccgc cggcagatcc acgagacccg gcgactgacg aaggggccct tcggcgtcga
     3901 ctacgtctac ttcccgttct tcaacaagac ggcgtactcc cccggctacg aagccgacgg
     3961 cgagcacccc acccgcaatt tcacctggtc gatcaccgac gcccacatcg acgtcctcgt
     4021 cgacgagaag gtcgacttcg tggtctggta ctggacggcg cccgaggccc gctggatcaa
     4081 gcggctcaag caggccggca tcccgcagtg gacgcaggtc ggcagcgtcg aaggggcccg
     4141 ggaggccgtg gcctacggcg ccgaggtgat catcgcccag ggcaagcagg gcggaggcca
     4201 cgcccggggc ttccaggacg gcaaccccct ccaccgctcg gagctcgtcc cgctggtcag
     4261 gaacgccgtc ccgaaggacg tgctcgtgat cggctcgggc ggcatcgccg acggccggac
     4321 actggccaac gccctcgccg agggcgccga cgccggctgg gtcggcaccc gcttcgccgt
     4381 cagccgggag tcctacgccc acgaggagta catgcgccgg gtgatcgccg tgaccgacgg
     4441 ctggaaggag acgacgccga cggccatctt cggccccgag ttcccccagg tctacacgcg
     4501 ctcgatcgtc aaccgggtgc tggcggagtg gaagggcaag gaggacaaga tccccacccc
     4561 gcctccgccg ccggcggtgg tgggcaccgc ccgcctgcag ccctggagcg tcgaaggcgg
     4621 catcccctac gccatgccga agttcagcgt gatcatcccg acccgggact ccaccggcga
     4681 cttcgacgag atgtgcctcc tggccggggc ggagagtgcg ccgctggtca agtcggtcaa
     4741 gccggcggcg gacatcgtgg ccgagatggc cgccgaggcc gcccggatca gaagcggtgg
     4801 atgacccact ccacgccctg ggcgaagcgg tagcccagat agatcaccat cgccacgccc
     4861 aggaacttga ggtgccgggg gacgggcggt agctcctcct cggccggcgg cgtacccctc
     4921 ggccggtcgg tgggctcggg ctccgctccc ggcggacggg cgcggccggc ctcgaccgcc
     4981 c
//
LOCUS       DATGJT010000716         2747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1445851, whole genome shotgun sequence.
ACCESSION   DATGJT010000716 DATGJT010000000
VERSION     DATGJT010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445851"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VKX24_12460"
     CDS             <1..328
                     /locus_tag="VKX24_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003994844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4040 domain-containing protein"
                     /protein_id="HLJ09340.1"
                     /translation="GAERGGRARGGRVIAALDAVTRPPAPGWAVTLLLVVLLVLVAAG
                     ATAVVVTRDTTRQVVLLSIYGVLLMLVFLGLQAPDVALSELGVGAVLLPLLLLLGLAK
                     VKARED"
     gene            325..1089
                     /locus_tag="VKX24_12465"
     CDS             325..1089
                     /locus_tag="VKX24_12465"
                     /inference="COORDINATES: protein motif:HMM:NF015970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnhB domain-containing protein"
                     /protein_id="HLJ09341.1"
                     /translation="MTPATRRAVFLVAGVGLLAFYLWGLTGLPAFGHYHGPYGDLIDA
                     VAVAQTHATGIVSAVNFDYRGFDSLGEEFILFVAATGVATVLRELRGERAEAPLGEGS
                     DADRPVSPTSETVRMAALVFTGPVLVLGWFLTTHAQTNPSGGFQGGVVMATAVFLVYL
                     AGQFLVFKRLSPVDVTDAVEAVGAGGFAAVGLGVLATGASFLADVLPLGSPPGEVDAS
                     GTIALISFFVGVEVVAAFVLIANELLEQTIVIRQGP"
     gene            1086..1430
                     /locus_tag="VKX24_12470"
     CDS             1086..1430
                     /locus_tag="VKX24_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019067977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter subunit C"
                     /protein_id="HLJ09342.1"
                     /translation="MNVFPFVIVAWIVVVGLYGIVTSRHLVHQIICLVVVQSSTYVLF
                     LAVGFRVNGVAPYFSDLPQKTLTVDPVVQALALTDIVVEAAVTALLVAITVQAHKRFG
                     TVDPQELRQLRD"
     gene            1436..>2747
                     /locus_tag="VKX24_12475"
     CDS             1436..>2747
                     /locus_tag="VKX24_12475"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 5 family protein"
                     /protein_id="HLJ09343.1"
                     /translation="MDPLLPLVVAVPLSAAAVISAANPLLKSRRRVLDAVALGTAAAV
                     TVMLVVILARAAGGEQLYWFAGVRPHQGVALGIDFAVDGLNAGLAAMTSLLVVASMVF
                     SSRYFESVSTWFHALMLVFLAGMVGFCLTGDVFDLFVWFEVMGVAAYALTAYRPEEKG
                     PIQGALNFAITNSVGAYLSLSGVALIYARTGALNMAQVGASLGRGHPSGLVTVAFLLI
                     IVGMLAKGAIVPFHFWLADAHAVAPTPVCVLFSGVMVELGLYGVARVYWSMFARALGH
                     PATMTAAFLALGSLTALVGAVYCYRQRHIKRLLAFSTISHVGLFLIGFALLTPLGLAG
                     AAVYVLGHAAVKAALFLCVGAVLHRLGSIDETALHGRGRGLKLTGVLFVLAALGLAGL
                     PPFGTFLGAGWIGDGASGVGDPWVVVVVMVATIVVGGAVLRVAGG"
BASE COUNT          296 a         1021 c          915 g          515 t
ORIGIN      
        1 gggagcggaa aggggtggtc gggcccgggg aggacgggtg atcgccgcgc tcgacgcggt
       61 cacccggccg cctgccccgg gctgggcggt gaccctgctg ctcgtcgtcc tgctggtgct
      121 cgtcgccgcg ggggccaccg ccgtcgtcgt gacccgggac acgacccggc aagtcgtcct
      181 cctcagcatc tacggcgtcc tgttgatgct ggtcttcctc ggtctccagg cccccgacgt
      241 cgcgctgtcc gagctgggcg tcggggcggt cctcctgccg cttctgctgc ttctcgggct
      301 ggccaaggtg aaggcgagag aggattgacc cccgccacca gacgcgccgt cttcctcgtc
      361 gccggggtag gcctgctcgc cttctacctg tgggggctca ccgggttgcc cgccttcggg
      421 cactaccacg gcccgtacgg cgacctcatc gatgccgtcg ccgtcgccca gacgcatgcg
      481 accggcatcg tctcggcggt caacttcgac taccggggct tcgacagcct gggcgaggag
      541 ttcatcctct tcgtcgcggc caccggggtg gccaccgtcc tccgggagct ccggggcgag
      601 cgtgcggagg cccctttggg ggagggttcg gacgcagacc gcccggtctc gccgaccagc
      661 gagaccgtcc ggatggcggc gttggtcttc accgggcccg tgctcgtcct cgggtggttc
      721 ctcaccaccc acgcgcagac caacccgtcc gggggcttcc agggtggggt ggtcatggcg
      781 acggcggtct tcctcgtcta cctggccgga cagttcctcg tgttcaaacg gctgagcccg
      841 gtggacgtca ccgatgccgt cgaggcggtc ggcgctggag ggttcgccgc cgtgggcctg
      901 ggcgtgctgg ccaccggcgc ctccttcctc gccgacgtcc tgcccctcgg ttcgccgccc
      961 ggcgaggtcg acgcctccgg gacgatcgcc ttgatcagct tcttcgtcgg cgtcgaggtg
     1021 gtggcggcct tcgtcctcat cgcgaacgag ctgctcgagc agaccatcgt gatccggcag
     1081 ggaccatgaa cgtcttcccc ttcgtcatcg tcgcctggat cgtcgtcgtc ggcctctacg
     1141 ggatcgtgac cagccgccac ctcgtccacc agatcatctg cctcgtcgtc gtccagtcct
     1201 cgacctacgt cctgttcttg gcggtcggct tccgggtcaa cggcgtcgcc ccctacttct
     1261 ccgacctccc ccagaagacc ctgaccgtcg accccgtggt gcaggcgctc gccctcaccg
     1321 acatcgtcgt ggaagcagcc gtcacagcgc tgctggtcgc gatcaccgtc caggcgcaca
     1381 aacggttcgg caccgtcgat ccccaggaac tgcgccaact gcgggactga gccccatgga
     1441 ccctctgctg ccgctcgtcg tggcggtgcc gctctcggcg gcggccgtga tctcggccgc
     1501 caaccccctg ttgaagtcgc gccgccgcgt cctcgacgcc gtcgccttgg gcaccgcggc
     1561 ggcggtcacc gtcatgctgg tcgtcatcct cgcccgcgcg gcgggcggcg agcagctcta
     1621 ctggttcgcc ggcgtccgcc cccaccaagg cgtcgcgctc ggcatcgact tcgccgtcga
     1681 cgggctgaac gccggcctgg ccgccatgac gtccctcttg gtcgtggcgt cgatggtctt
     1741 ctcctcgcgg tacttcgaga gcgtctccac gtggttccac gcgctgatgc ttgtgttcct
     1801 ggcggggatg gtggggttct gcctcacagg cgacgtcttc gacctgttcg tctggttcga
     1861 ggtgatgggg gtcgcggcct acgcgctcac cgcctatcgg cccgaggaga agggcccgat
     1921 ccagggggcg ctcaacttcg ccatcaccaa cagcgtgggc gcctatctct cgctgtccgg
     1981 cgtcgccctc atctatgccc gcaccggcgc gctcaacatg gcccaggtcg gcgcgtcgct
     2041 cggacggggc cacccgagcg gcctcgtcac cgtggccttc ctcctcatca tcgtgggaat
     2101 gctcgccaag ggcgcgatcg tccccttcca cttctggctg gccgacgccc acgcagtggc
     2161 gccgacgccg gtgtgcgtcc tcttctccgg ggtgatggtc gagctcggcc tctacggcgt
     2221 ggcccgggtg tactggtcca tgttcgcccg cgccctcgga cacccggcga cgatgacggc
     2281 ggcgttcctc gccctcgggt ccttgaccgc cctcgtcgga gccgtctact gctaccggca
     2341 gcgccacatc aaacggctgc tcgccttctc caccatcagc cacgtcggcc tcttcctcat
     2401 cggcttcgcg ctgctcactc cgctcgggct ggccggggcg gccgtctacg ttctcgggca
     2461 cgccgccgtc aaggctgcgc tgttcctctg cgtcggggcg gtgctccacc gcctggggtc
     2521 gatcgacgag acggcgctcc acggccgcgg ccgcgggctc aagctgaccg gggtcctgtt
     2581 cgtcctggcc gccctcggat tggccggact gccccccttc ggcaccttcc tcggcgctgg
     2641 ctggatcggc gacggcgcgt cgggggtcgg cgatccctgg gtcgtggtcg tcgtcatggt
     2701 ggccacgatc gtggtcggcg gcgccgtcct gcgggtcgcc ggcgggg
//
LOCUS       DATGJT010000717         2283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_200380, whole genome shotgun sequence.
ACCESSION   DATGJT010000717 DATGJT010000000
VERSION     DATGJT010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200380"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1282
                     /locus_tag="VKX24_12480"
     CDS             <1..1282
                     /locus_tag="VKX24_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLJ09344.1"
                     /translation="WKQLMDTDACTICGRCTSVCPANKTGKPLDPREIVLKVGEVMAA
                     TGAPKVPPPVTVDDGITVSAGSVLERITAEEVWACTTCKACDEICPVNIEILDKILDI
                     RRYYSLMESNFPAELGNAYRGMENSSNPWGMNQADRAQWAKGLPDEVPIVDPYGGSLD
                     HEYLYWVGCVTSFDDRNKKVAVAVTKLLQRAGVDFAILGQNELCTGDPARRSGNEYVF
                     QMLASQNIEALNGLGVRKIIASCPHCFNTLRNEYPDYGGRFEVVHHSQFLMQLVEDGR
                     LPMTGATLDERIAYHDSCYLGRHNDIYLAPRKVIGSIAGVEVVEMPRNGTRGLCCGAG
                     GARMYMEERTGKKVNIERTEEALATGADRIAVACPYCMIMLDDGVKEKGADERVKVSD
                     ISVVLLEAIEGIPARAATAAMAQGSTPIVPAAES"
     gene            complement(1336..1917)
                     /gene="dcd"
                     /locus_tag="VKX24_12485"
     CDS             complement(1336..1917)
                     /gene="dcd"
                     /locus_tag="VKX24_12485"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006437600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HLJ09345.1"
                     /translation="MILSDVSIRKELADGRIVIDPLEDRHIQPSSVDLRVDRYFRVFR
                     NDTTPYIDPKLPHEDLTELVEVAEGKAFILHPGEFVLGSTLEVVTLPDDLVARLEGKS
                     SLGRLGLLIHSTAGFVDAGWSGHLTLELSNVANLPIAIYPGMKIGQISFIRMTSPAER
                     PYGSTETRSKYQGQRGPTPSRYYQNFEDEEAGG"
     gene            complement(1928..>2283)
                     /locus_tag="VKX24_12490"
     CDS             complement(1928..>2283)
                     /locus_tag="VKX24_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HLJ09346.1"
                     /translation="GPDEDHNPETAASLAAVLGGRADVPAAARLEVARLVEDLTASYA
                     GSWYSVISLHGGGSPEAMKREIWRNYPVGDKVDLVERLLDRGVAGEGVGLPSIRRRVS
                     RQPGRCCDAGCEPLT"
BASE COUNT          373 a          785 c          800 g          325 t
ORIGIN      
        1 ctggaagcag ctgatggaca ccgacgcctg caccatctgc gggcggtgca cctcggtctg
       61 cccggccaac aagaccggca agcccctcga cccccgcgag atcgtcctca aggtcggcga
      121 ggtcatggcc gccaccgggg cgcccaaggt gccgccgccg gtcaccgtcg acgacgggat
      181 caccgtgtcg gccggttcgg tgctggagcg catcaccgcc gaggaggtgt gggcctgcac
      241 gacctgcaag gcctgcgacg agatctgccc ggtcaacatc gagatcctcg acaagatcct
      301 cgacatccgc cgctactact cgctgatgga gtcgaacttc cccgccgagc tcggcaacgc
      361 ctaccggggc atggagaact cgtcgaaccc ctggggcatg aaccaggccg accgggcaca
      421 gtgggccaag ggcctgcccg acgaggtccc gatcgtcgac ccctacggcg gcagcctcga
      481 ccacgagtac ctctactggg tcggctgcgt cacgagcttc gacgaccgca acaagaaggt
      541 ggccgtcgcc gtgaccaagc tgctgcagcg ggccggggtc gacttcgcca tcctcggcca
      601 gaacgagctc tgcaccgggg acccggcccg ccggtccggc aacgagtacg tgttccagat
      661 gctggcctcg cagaacatcg aggcgctgaa cggcctcggc gtccgcaaga tcatcgccag
      721 ctgcccgcac tgcttcaaca cgctccggaa cgagtacccc gactacggcg gccggttcga
      781 ggtcgtccac cactcgcagt tcctcatgca gctggtggag gacgggcgcc tcccgatgac
      841 cggcgccacc ctcgacgagc gcatcgccta ccacgactcc tgctacctcg ggcgccacaa
      901 cgacatctac ctcgcccccc gcaaggtcat cggttcgatc gccggcgtcg aggtggtgga
      961 gatgccccgc aacgggaccc gggggctctg ctgcggggcg gggggcgccc gcatgtacat
     1021 ggaggagcgg acgggcaaga aggtcaacat cgagcgcacc gaggaggcgc tggcgaccgg
     1081 cgccgaccgc atcgccgtgg cctgccccta ctgcatgatc atgctcgacg acggtgtgaa
     1141 ggagaagggc gccgacgagc gggtgaaggt cagcgacatc tccgtggtgc tgctggaggc
     1201 catcgaaggg atccccgccc gggcggcgac ggcggccatg gcccagggct cgaccccgat
     1261 cgttccggcg gccgagtcct gaggccgaac cgactctgag cccagatgtc ccgtggttag
     1321 ccggaatatg tgcggctaac cacccgcttc ctcgtcctcg aagttctggt agtagcggga
     1381 cggggtcggg ccccgctggc cctggtactt ggagcgggtc tcggtgctgc cgtagggccg
     1441 ctccgccggc gacgtcatgc ggatgaagga gatctggccg atcttcatcc cggggtagat
     1501 ggcgatcggg aggttggcga cgttcgacag ctcgagcgtg aggtggcccg accaccccgc
     1561 atcgacgaag ccggcggtgg aatggatcag cagccccagg cgccccaggg agctcttccc
     1621 ttccaggcgg gcgacgaggt cgtccggcag agtcacgacc tcgagcgtgc tgccgagcac
     1681 gaactcgccg gggtggagga tgaacgcctt gccctccgcc acctcgacca gctcggtcag
     1741 gtcctcgtgg gggagcttgg ggtcgatgta gggggtggtg tcgttgcgga agacccggaa
     1801 gtagcggtcg acccgcaggt cgaccgagga cggctggatg tggcggtcct cgagcgggtc
     1861 gatcacgatc cgcccgtcgg ccagctcctt ccggatggag acatcggaga ggatcacggc
     1921 ggcgagatta ggtcagcggc tcgcagccgg cgtcgcagca gcgcccgggc tggcgggaga
     1981 cacggcgccg gatggacggg agcccgacgc cctcgccggc cacgcctcgg tccagcagcc
     2041 gctcgacgag gtcgaccttg tcgccgacgg ggtagttccg ccagatctcc cgcttcatcg
     2101 cctccgggga cccgccgccg tggagcgaga tcaccgagta ccagctgccg gcataggagg
     2161 cggtgaggtc ctccacgagg cgggcgacct cgaggcgggc ggcggccggg acgtcggccc
     2221 gtccgccgag caccgccgcc agcgacgccg ccgtctcggg gttgtggtcc tcatcgggcc
     2281 cgg
//
LOCUS       DATGJT010000718         2171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_96827, whole genome shotgun sequence.
ACCESSION   DATGJT010000718 DATGJT010000000
VERSION     DATGJT010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96827"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VKX24_12495"
     CDS             <1..957
                     /locus_tag="VKX24_12495"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HLJ09347.1"
                     /translation="GAPATSATTAVPVADHRVAASGAFIVGDKGAAAASQPGGAANGR
                     LRAGVALAVDAIQGAWAHVLTPCENHVWVPLADGRVEKTADIVIDAGHGGSEPGAVGQ
                     GGLTEKELNLAVARLVVDDLAAQGVSAALARTGDYQQTLASRVAVAAAMHPKAFVSIH
                     HNAEPDGPRPQGPGTETYYQTGKEVSAAQAAQSKRLAGLIYEEVVKALSQYSASWMAD
                     TDAGAKYRIGDSGNDYYGVLRLSGADGIVGSLAELAFLSNPSEEFLLKRDDVRQAEAA
                     AVARGIVRWLRTNDPGSGFTTPYPRTEPAGGGGGTAGCVDPV"
     gene            complement(1015..1746)
                     /locus_tag="VKX24_12500"
     CDS             complement(1015..1746)
                     /locus_tag="VKX24_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012949775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLJ09348.1"
                     /translation="MREIELSVDGPVAVLTLAAHDRRNALSPAMAAELVEACEEIDGN
                     AEVGAVVVTGGPYFCAGAHRDTLANTGADPVGEPNFSNLTVVYRSFMRVGELAVPTVA
                     AVRGGAVGAGMNLVLSTDLRVVADDARLMAGFLRIGLHPGGGFFVLGGRTAGREVTAA
                     LGLFGEELSGRRAAELGMAWSAVPDADVEGKAMELAARAGADPQLARAATRSFRSELG
                     PPMATWNLALDAERSAQMWSLRRRP"
     gene            1799..>2171
                     /locus_tag="VKX24_12505"
     CDS             1799..>2171
                     /locus_tag="VKX24_12505"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HLJ09349.1"
                     /translation="MGTGVKLGVLASGSGTNLQAIIDAGLPVAVVVTDRPGVAALDRA
                     AGAGIPTAVVDRAQHLPDRVAFTEGVIGALRAHDVDLVAMAGFMTVLAEPMFAAFPDK
                     VINTHPSLLPSFRGAHAVAEAL"
BASE COUNT          290 a          794 c          834 g          253 t
ORIGIN      
        1 ggggcgccgg cgacgtcggc cactacggcg gtgcccgtgg ctgaccaccg ggtggcggcg
       61 tccggagcct tcatcgtcgg cgacaaggga gcggccgcgg cgtcgcagcc cggcggcgcc
      121 gccaacgggc gactgcgggc cggggtggcg ctggccgtcg acgccatcca gggcgcctgg
      181 gcccacgtcc tcacgccgtg cgagaaccac gtctgggtcc cgctggccga cggccgggtc
      241 gagaagaccg ccgacatcgt gatcgacgcc ggccacggcg ggtcggagcc cggcgccgtc
      301 gggcagggcg ggctgaccga gaaggagctg aacctggccg tggcccggct cgtggtcgac
      361 gacctggccg cccagggcgt gagcgcggcg ctggcccgca ccggcgatta ccagcagacg
      421 ctggcgtcgc gggtggcggt ggccgccgcc atgcacccca aggccttcgt gtcgatccac
      481 cacaacgccg agccggacgg gccccgcccc cagggcccgg gtaccgagac gtactaccag
      541 accggcaagg aggtctcggc ggcccaggcg gcgcagtcga agcggctggc cgggctgatc
      601 tacgaggagg tcgtgaaggc gctgtcgcag tactcggcgt cgtggatggc cgacaccgac
      661 gccggcgcca agtaccgcat cggcgactcc ggcaacgact actacggcgt gctgcggctg
      721 tcgggggccg acgggatcgt gggcagcctc gccgagctgg ccttcctctc caacccgtcc
      781 gaggagttcc tgctcaagcg cgacgacgtc cgccaggccg aggcggccgc cgtggcccgg
      841 ggcatcgtcc ggtggctccg gaccaacgac cccggcagcg gcttcaccac gccctacccc
      901 cgcaccgaac cggcgggcgg aggcggcggc accgccggct gcgtcgaccc tgtgtgacga
      961 accggcgttc gtgagggccg cggtaccgcc ctcaggaacg ccagtttgga gaggtcacgg
     1021 ccggcggcgg agggaccaca tctgggccga gcgttcggcg tcgagggcca ggttccaggt
     1081 ggccatcggg gggccgagct cggagcggaa ggaccgcgtc gccgcccggg cgagctgcgg
     1141 gtcggcgccg gcccgggcgg ccagctccat cgccttgccc tccacgtcgg cgtcgggcac
     1201 ggcggaccac gccatcccga gctcggcggc ccgccgcccg gacagctcct cgccgaagag
     1261 gccgagggcg gcggtcacct cccgcccggc cgtccgcccc ccgaggacga agaacccccc
     1321 gccggggtgg agcccgatgc ggaggaagcc ggccatgagc cgggcgtcgt cggccaccac
     1381 ccgcaggtcg gtggacagga cgaggttcat cccggccccc accgccccgc cccgcacggc
     1441 ggcgacggtc ggcaccgcca gctctccgac acgcatgaac gaccggtaga ccacggtcag
     1501 gttggagaag ttcggctcgc cgacggggtc ggcgccggtg ttggccagcg tgtcgcggtg
     1561 ggcgccggcg cagaagtacg gtccgccggt caccaccacg gcgccgacct cggcgttgcc
     1621 gtcgatctcc tcgcaggcct ccacgagctc ggcggccatg gccgggctga gggcgttgcg
     1681 gcggtcgtgg gcggccaggg tgaggacggc gacggggccg tcgacggaaa gctcgatctc
     1741 gcgcacgagg tcggaagcta gcgtgggacc ccagggtctc tcggagcgga ggatgtcgat
     1801 ggggacgggc gtgaagctgg gagtgctggc ctccgggagc ggcaccaatc tgcaggccat
     1861 catcgacgcc ggcctgccgg tggcggtggt ggtgaccgac cggcccggcg tggccgccct
     1921 cgaccgggcg gccggcgccg gcatcccgac cgccgtcgtc gaccgggcgc agcacctgcc
     1981 cgaccgggtg gcgttcaccg agggcgtcat cggggcgctc cgggcccacg acgtcgacct
     2041 cgtggccatg gcggggttca tgacggtgct ggccgagccg atgttcgccg ccttccccga
     2101 caaggtgatc aacacccacc ccagcctgct gccgtcgttc cggggggccc acgccgtggc
     2161 cgaggccctg g
//
LOCUS       DATGJT010000719         3104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1446535, whole genome shotgun sequence.
ACCESSION   DATGJT010000719 DATGJT010000000
VERSION     DATGJT010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446535"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VKX24_12510"
     CDS             complement(<1..262)
                     /locus_tag="VKX24_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010593337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09350.1"
                     /translation="MANPDEASSLRYLMRLPIGRGLVFRTGGTWPRTKALFCYPMPVE
                     AWPGEGEVIERVPLRSCVRRGAAIDVVADRARENRSQLVFTTG"
     gene            complement(265..1479)
                     /locus_tag="VKX24_12515"
     CDS             complement(265..1479)
                     /locus_tag="VKX24_12515"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HLJ09351.1"
                     /translation="MRGSITAHKSGWRVWVDAGADPVTGRRRRLTRVVEGSRKDAERA
                     LTALLAEADAGRVRTGEQRTFGEVIEAYLDHKTVSVEPTTAANYRSQLRYIPPRLLAM
                     PVHKVGVEHLEALYAQLATRGSTRTGRPLTAKSGRNVHSVIRGALELARRRRWIFVNP
                     AMDAERPADRRRPPSPAPAGSLAELLAAAATEHPTLPLYLRVSLVVGGRRSEIHGLRW
                     SGVDFDRSRLLLRDTVVRAGNELLVKPRLKSGDPRLVYVDAGTMEHLRHHHATAFDTA
                     MAVGIPLPRDAFVFSNEADGSEPWRPETTARRFQRACVAAHLPKTTRLHDLRHLAARP
                     GCPASRRQRPPRPRHQQHHPRRVRRTGPGHRPPCRRGHGEAFRTEVAAMIPRPAARRV
                     LPFASWSAPASW"
     gene            complement(1605..1688)
                     /locus_tag="VKX24_12520"
     tRNA            complement(1605..1688)
                     /locus_tag="VKX24_12520"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1652..1654),aa:Leu,seq:gag)
     gene            complement(1735..>3104)
                     /locus_tag="VKX24_12525"
     CDS             complement(1735..>3104)
                     /locus_tag="VKX24_12525"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ09352.1"
                     /translation="DPRSRTLAGEAILGEVLPQLFRVDPAGREVGWLADDASVRVAPD
                     GRSATFALRPGARWSDGAPITVDDVRFTLDTVRGAAWPGPAAGYDRVTVDGAGGSVTL
                     RFDGPFPGWRRLFSGVDFVLPAHRLAGKDLRKEWTSGPDVFGGPFRLGAVTPGLSVGL
                     ARNDSWWGPPAKAASIEVLVVPDVRTMEQLIGRGELDVAWPPETTNRIGRFRALPGVV
                     VSVAEPGGTFEALAANTQTLPADRRLAYLGLANRDRFVDVVLSGEADRAVSLAGPASS
                     LSAGPSPGPPVWAAAGGTPGSGALKGAAQATLVSDEEDEQSPLVGRVLQQGAAAAGAD
                     VELKSDEAIKVDAGWIPDGRFDLALMRAVAWPEPCWSCWFADADVGRGNVTRAKGLGA
                     LAAAADADPAAAPALEARVKSDGLLLPLWRPRAVLAGRGVTGLVANSWSVGPFWSAES
                     WSPAR"
BASE COUNT          427 a         1159 c         1144 g          374 t
ORIGIN      
        1 ggccggtcgt gaacacgagc tgcgaacggt tctccctcgc ccggtcggcc acgacgtcga
       61 tggccgcacc ccggcggaca caggaccgca gcgggacccg ctcgatgacc tcgccctcgc
      121 cgggccacgc ctccaccggc atcgggtagc agaacaacgc cttcgtccgg ggccaggtcc
      181 cgcctgtccg gaacacgaga ccgcggccga tcggcagccg catcagatag cgcagtgagg
      241 acgcctcgtc cgggttcgcc atgatcacca gctcgccggc gccgaccacg acgcaaaggg
      301 tagaacccgg cgtgcggcgg gccgcggaat catggccgct acttcggttc gaaaagcttc
      361 cccatgacct cggcggcaag gcggtcggtg tcctggaccc gtccgccgta cacgtcgagg
      421 gtgatgctgt tggtggcgtg gccgaggcgg gcgctgacgg cgggaagcgg gacaccctgg
      481 tcgagcggcc aggtggcgca ggtcgtggag gcgggtggtc ttcggcaagt gggcggcgac
      541 gcaggcccgc tggaagcggc gggcggtcgt ctccggccgc cacggctcgg acccgtccgc
      601 ctcgttggag aagacgaagg cgtcgcgggg caacgggatc ccgaccgcca tcgccgtgtc
      661 gaaggcggtg gcgtggtggt gccggaggtg ctccatcgtc cccgcgtcga cgtacacgag
      721 cctggggtca ccgctcttca gccgcggctt gacgaggagc tcgtttcccg cccgcacgac
      781 ggtgtcccgc agcagcagcc ggcttcggtc gaagtcgacg cccgaccagc gcagcccgtg
      841 gatctcgctc cggcggccgc cgaccacgag gctcaccctc aagtagagcg ggagggtcgg
      901 gtgctcggtg gcggcggcgg ccagcagttc ggccagcgat ccggccgggg ccgggctcgg
      961 gggacggcgc cggtcggccg gtcgctcggc gtccatggcg gggttgacga agatccaccg
     1021 gcggcggcga gccagctcca acgcgccgcg gatcacggag tggacgttgc ggccggactt
     1081 cgccgtcagc ggccggccgg tccgggtgga accccgcgtg gccagctggg cgtagagggc
     1141 ctcgaggtgc tcgaccccga ccttgtggac cggcatggcc agcagccggg gtgggatgta
     1201 gcggagctgg gagcggtagt tggccgcggt cgtcggctcg acgctgacgg tcttgtggtc
     1261 gaggtaggcc tcgatgacct cgccgaacgt gcgctgctcc cccgtccgca cccggccggc
     1321 gtcggcctcg gcgaggagcg ccgtcagcgc ccgctcggcg tccttcctgg atccctcgac
     1381 gacccgggtc aggcgccgcc ggcgcccggt caccggatcg gcgccggcgt cgacccagac
     1441 ccgccacccg gatttgtgcg ccgtgatcga tccccgcata gcgacccgtg tgccgccgac
     1501 cagtgacact tggcacacga attggcacac gggctgctgc cgacaaaaaa ggcggcttcc
     1561 ggactctttc cgaaaaccgc ctctgacctg ccacgatacc ctcgtgtcgg aggggggact
     1621 tgaaccccca cgtccttgcg gacactaggc cctcaaccta gcgcgtctgc ctattccgcc
     1681 actccgacat ggccgccccg gggagcgaac gcagagagtg tagcggcggg gatgtcagcg
     1741 ggcgggcgac caggactcgg ccgaccagaa ggggccgacc gaccaggagt tcgccaccag
     1801 gccggtgacg ccccgcccgg ccaggaccgc ccggggccgc cacagcggga gcaggagccc
     1861 gtccgacttc acgcgggctt cgagggcggg ggcggcggcc gggtcggcgt cggcggcggc
     1921 ggccagggcg ccgaggccct tggcccgggt gacgttgccc cggccgacgt cggcgtcggc
     1981 gaaccagcag ctccagcagg gctcgggcca ggccaccgcc cgcatcaggg ccaggtcgaa
     2041 gcggccgtcg gggatccacc cggcgtcgac cttgatcgcc tcgtcggact tcagctccac
     2101 gtcggcgccg gccgcggccg ccccctgctg gaggacccgt ccgacgagcg ggctctgctc
     2161 gtcctcctcg tcggagacca gcgtggcctg cgccgcgccc ttcagcgccc cgctccccgg
     2221 cgtaccgccc gccgccgccc agaccggcgg cccgggcgac gggccggccg acagcgacga
     2281 cgccgggccg gccagcgaca ccgcccggtc ggcctcgccg ctcagcacga cgtcgacgaa
     2341 gcggtcgcgg ttggcgagcc cgaggtaggc gaggcgccgg tcggcaggca gcgtctgggt
     2401 gttggccgcc agcgcctcga aggtgccccc cggttcggcc accgacacca cgacaccggg
     2461 cagggcccgg aaccgcccga tccggttggt cgtctccggc ggccaggcga cgtcgagctc
     2521 gccccggccg atgagctgct ccatcgtccg cacgtcgggc acgaccagca cctcgatcga
     2581 ggccgccttg gccggtggcc cccaccacga gtcgttgcgg gccagcccga ccgacagccc
     2641 cggcgtcacg gcgcccaggc ggaacggccc gccgaagacg tcggggcccg acgtccactc
     2701 cttccgcagg tccttcccgg ccagccggtg ggcggggagc acgaagtcga cgccggagaa
     2761 caaccgccgc caaccgggga acggtccgtc gaaccggagg gtgaccgagc ccccggcgcc
     2821 gtcgaccgtg acccggtcgt agccggccgc cggtccgggc caggcggcgc cgcgcacggt
     2881 gtcgagcgtg aagcggacgt cgtcgacggt gatcggcgcg ccgtcggacc atcgtgcccc
     2941 gggccgcagg gcgaacgtcg ccgaccgccc gtccggcgcc acccggacgg acgcgtcgtc
     3001 ggccagccac ccgacctccc gcccggccgg gtcgacccgg aagagctggg gcagcacctc
     3061 gccgaggatg gcctcccccg ccagcgtccg ggaccgcggg tcga
//
LOCUS       DATGJT010000720         3092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_718795, whole genome shotgun sequence.
ACCESSION   DATGJT010000720 DATGJT010000000
VERSION     DATGJT010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_718795"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1050
                     /locus_tag="VKX24_12530"
     CDS             <1..1050
                     /locus_tag="VKX24_12530"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ09353.1"
                     /translation="VPIAVFALIVGAAIVPNSKGARVERTDLVGSLLSIGGMGLLLWS
                     IIEAPNRGWSSLLVLGGLGGSCLALLAFVLWERRSPNAMLELSLFRSRRFSAAIGAMA
                     VVIFALMGALFLLTQYLQFSLGYTPLQTGLRVAPIAAVLLVCAPTSTLLVRLVGTKPV
                     VFVGMVLIGLGMGMLTSVTTATNYLDVLPWLFLLGIGAGLAFAPCTDAVMGSLRLEQT
                     GVGSATNGAALQTGGALGVAVLGSLLNARYQGRMAPVLARYPIPRSVVHLVTGSLGGT
                     LAAARRVGGPLGAALAHLGRVSFVGGMDLALTVGACATAVAALVVVGVLPNRPTPVHP
                     VTEVPARAPSPVARR"
     gene            1436..1681
                     /locus_tag="VKX24_12535"
     CDS             1436..1681
                     /locus_tag="VKX24_12535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09354.1"
                     /translation="MVTEQAYPLPTGVWRNQLGSMLELWVDLESPLSGTIESTVGGVE
                     GQYPVSGFFVRQPYDRDGCPDQDREARAAPGAEGLVA"
     gene            1688..2806
                     /locus_tag="VKX24_12540"
     CDS             1688..2806
                     /locus_tag="VKX24_12540"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HLJ09355.1"
                     /translation="MPYLSFALRNLRAKKGRSLGLAAAVAFAVMTVVTLAVTSSGLEQ
                     SAAAVISIGKADFTVAQKDAPNLLASTIDAGERARILSTPGVESAVGVLVETERINAN
                     NPVFIEIGIAPGDLARFGVNIVAGRPYQATARSQCMLGWRAASNLGLHVGSKFSANGT
                     VNTVTGLYSTGNSFGDDAAMFPLPAVQGYNRVPGIVTMVFVKVHHGYSESGVEHSIAY
                     RLPELTTIRTATQFGRADRDLVYLQAAVTGSTILAVIIGAVIVGNTMLLSVFERTREL
                     GLLRAVGWTRRRIVGLILLEALALALLGACVGVGLSFAVTGILEHVPRLSGVLHTDFT
                     PTAFWRALYTALGMTLLGCLYPAIRAAFLVPLKALSYE"
     gene            2799..>3092
                     /locus_tag="VKX24_12545"
     CDS             2799..>3092
                     /locus_tag="VKX24_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020514601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ09356.1"
                     /translation="MSDARGSAPEEPANGPVIELEDVVKRYPGGVLALDHLDLAIAKA
                     EFVAISGPSGCGKSTLLHLIAALDRPTSGRVKVNGRDLTKVRDLSYYRRNEVGL"
BASE COUNT          432 a         1046 c         1068 g          546 t
ORIGIN      
        1 gtgccgatcg cggtcttcgc tctcatcgtc ggcgcggcca tcgtcccaaa ctcaaagggg
       61 gctcgtgtcg agcggaccga cctcgtcggt tcactgctct cgatcggcgg catggggctg
      121 ttgctgtggt cgatcatcga ggcccccaac cgtggctggt cgtctctgtt ggtcctgggc
      181 gggctcggcg gatcgtgcct cgctctcttg gccttcgtcc tctgggaacg ccgatcgccg
      241 aacgccatgc tcgagctctc gctcttccgt tctcggcgct tcagcgcggc catcggggcg
      301 atggcggtgg tgatcttcgc cctcatggga gcgctcttcc tgctcaccca gtaccttcaa
      361 ttctccctcg ggtacacgcc cctgcagacg gggctccggg tcgcgccgat cgccgccgtc
      421 ctgctcgtgt gcgcgccgac ctcgaccctc ttggtgcgtc tcgtcgggac gaagccggtg
      481 gtgttcgtcg ggatggtgct gatcggcctc ggaatgggca tgctgacctc ggtcaccacc
      541 gcgacgaact acctcgacgt ccttccctgg ctctttctcc tcgggatcgg tgccggcctg
      601 gcattcgcgc catgcacgga cgccgtcatg ggctcgctcc gattggagca gacgggagtg
      661 gggtcggcga cgaacggcgc cgccctacaa actgggggcg ccttgggcgt cgcggtcctc
      721 ggcagcctgc tcaatgcccg ctatcagggg cgcatggcgc cggtcctcgc ccggtacccg
      781 atccctcggt cggtcgttca cctggtgacc gggtcgctcg ggggaacgct ggcagcggcc
      841 cgacgggtgg ggggaccctt gggggccgcg ctcgcccacc tgggccgggt gtcgttcgtg
      901 ggcggcatgg atctcgcctt gacggtgggg gcgtgcgcca ccgcggtggc cgccctggtc
      961 gtggtcgggg tcctgccgaa ccggccgaca ccggtgcacc cggtgaccga ggtgccggct
     1021 cgcgcgccgt ccccggtcgc gcggcgctag ggacgacgaa gcgcccgccc ctcaacgagg
     1081 cgggcgctct tcgctgaatt caactggccc accaaggggg aggaaagcgc tcaatgagcc
     1141 ttccgggcgc tttgccgtgg caccggccct actgctggcc cgcgtgcctc aaagtgagga
     1201 aattacgagc cctcgaccct tggcttctgg aagtcgttcg gtctagccac cacttccacc
     1261 tccttagccc ctgtttgaag ccaacatgtt caacgccgtc gcccgtgcgg atattcccgg
     1321 gaccgaggcc cccacgccgg gaagacagcg tctcgtggcg ggaccttcgt ccctgtcccg
     1381 tcgggcgacg cgccatggag aatgcctcaa cgggtcgtat cggaaggagg ccggcatggt
     1441 gaccgaacag gcgtacccgt tgccgaccgg tgtgtggcgg aaccagctgg ggtcgatgct
     1501 cgagctctgg gttgacctgg aaagtcccct cagcggaacc atcgagtcga cggtcggcgg
     1561 cgtggagggg caatacccgg tctcggggtt cttcgtccgg caaccgtatg accgcgatgg
     1621 ttgtcctgac caggaccgcg aggctcgagc ggctcccggg gccgaaggcc tggtggcctg
     1681 accaccgatg ccgtatctgt cattcgccct caggaacctg cgggccaaga aggggcggtc
     1741 gctcgggctg gccgcggccg tcgccttcgc cgtgatgacg gtcgtcaccc tggcggtgac
     1801 gagcagcgga ctcgagcagt cggcggcggc agtgatctcg attggcaagg cggacttcac
     1861 cgtggcccag aaggacgcgc ccaacctcct ggccagcacc atcgacgccg gggagcgggc
     1921 caggattctc agcactcccg gcgtcgagag cgccgtcggc gtcctggtcg agaccgagcg
     1981 catcaacgcc aacaaccctg tattcatcga gatcggcatc gcgccgggtg acttggcacg
     2041 cttcggagtg aacatcgtcg ccggccgtcc ctatcaggcg accgcccgca gccaatgcat
     2101 gctgggatgg agggcggcgt cgaacctcgg tctgcacgtc gggtcgaagt tctccgccaa
     2161 cggcacggtc aacacggtga cagggctcta ctcgaccggg aacagcttcg gggacgacgc
     2221 ggcgatgttc ccgctgccgg cggtgcaggg ctacaaccgg gtgccgggga tcgtgaccat
     2281 ggtcttcgtg aaggtccacc acgggtactc ggagtccggg gtcgagcact cgatcgcgta
     2341 ccggctgccc gagttgacga cgatccggac ggcaacccag ttcggccggg ccgaccgcga
     2401 cctcgtgtac ctccaggcgg cggtcaccgg gagcaccatc ctggcggtga tcatcggcgc
     2461 cgtcatcgtc gggaacacga tgctgctcag cgtcttcgag cggacgaggg agctcggcct
     2521 gttgagggcg gtcggctgga cccggcgccg aatcgtcggg ctgatcctcc tcgaggcgct
     2581 cgccctggcg ctgctcggcg cgtgcgtcgg cgtcggcctc tcgttcgcgg tgacgggcat
     2641 cctcgagcac gtgccccggt tgtcaggggt gctgcatacg gacttcacgc cgacggcgtt
     2701 ctggcgggcg ctgtacaccg cactcggcat gacgctgctc gggtgcctct atccggcgat
     2761 ccgggccgcg ttcctggtcc cgctcaaggc cctcagctat gagtgacgcc cgcgggagcg
     2821 cgcccgagga gccggccaac gggccggtga tcgagcttga ggacgtcgtc aagcgctatc
     2881 ccggaggggt cttggccctc gatcatctcg acctcgccat cgccaaggcc gagttcgtgg
     2941 cgatctcggg accgtcgggg tgcgggaagt cgacgctgct gcacctcatc gccgccctcg
     3001 accgtccgac ctcggggaga gtgaaggtca acgggcggga cctgacgaaa gtccgcgatc
     3061 taagctacta ccgccggaac gaggtcggtc tc
//
LOCUS       DATGJT010000721         4076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1343778, whole genome shotgun sequence.
ACCESSION   DATGJT010000721 DATGJT010000000
VERSION     DATGJT010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343778"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VKX24_12550"
     CDS             <1..264
                     /locus_tag="VKX24_12550"
                     /inference="COORDINATES: protein motif:HMM:NF024384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3866 family protein"
                     /protein_id="HLJ09357.1"
                     /translation="RVTVPLPLVGGVEEATLRADIAAAGLDTRHDVVAVKPPDILGLF
                     EKHGLTVTSMGRPAADDPVFFACAAAAGVVASELMFPNAGEPG"
     gene            266..1216
                     /locus_tag="VKX24_12555"
     CDS             266..1216
                     /locus_tag="VKX24_12555"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HLJ09358.1"
                     /translation="MADRLERLTNLVAVLLETRRPLTLEEIVERVPGYPTERESCRRQ
                     FERDKATLREIGVPIALEALHAFDQESGYRIHREDYELPPLDLTDDERVALHLAVTAV
                     RLGGGPADGPAGAGREALLKLGGIEGEAAPTLAALPDVPALPALFDAYRRRAPVSFTY
                     RGGLRRLDPYGILFRNGHWYVVGRDADREAIRAFRADRIESSIEAGPGGGFERPDGFD
                     PASALRDEPWRFGDEEPVEARVLVGPAQAGWVEADLGAAAVAERRDDGSVVVRMAVTN
                     RDAFRSYVLGLLDHAEVLGPAELRADMVAWLSTLAGRGTA"
     gene            1180..2142
                     /locus_tag="VKX24_12560"
     CDS             1180..2142
                     /locus_tag="VKX24_12560"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HLJ09359.1"
                     /translation="MAVDPGRAGDSVTRPDAAVRLRRLLTVIPWIVDHQGSRLDDLAA
                     RFGIKVAELERDLELVPFCGLPPYTPDRLIDCEIVDGRVFLRFAEYFGRPLRLTPAEG
                     FSLLAAGQALLAVPGADEKGSLASALGKLAGVLGGGDGMAVELGPARYLEPLRAAAAA
                     SERVEIDYYTFGRDELTTRRIDPRAVFAAAGQWYVDAFCHKAGDDRLFRVDRVRGVRP
                     TGEHFDASTPSAAGPALFNPRPSDRRVTLLLNAGAAWVAESYPLESVEERPDGRLKVI
                     LAASERAWLERLLLRLGPAAEVLDPAEVRVEAAEAARRLLERYG"
     gene            2204..2986
                     /gene="lepB"
                     /locus_tag="VKX24_12565"
     CDS             2204..2986
                     /gene="lepB"
                     /locus_tag="VKX24_12565"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HLJ09360.1"
                     /translation="MDRPSDISAGTPPASEAPPEAPLPPEPPTADQPGPPLGEAPVAP
                     AAPAPAAPAPTASAEAPEVMAAVPAAESAEAEAPPAKARKKGKSRRKQGYEWLVLVAA
                     SLAVALFVRAFLIQAFYIPSESMVPTLLTNDRVLVNKLSYHLHDVHRGDIVVFDAPPG
                     AATAQVKDLIKRVIGLPGDTIEGRNGSIFINGKPLDEPYLPPDVRSRDFPPAKVPPKD
                     IWVLGDNRQDSRDSTFFGPITERSIVGRAFVRIWPLDRLGLL"
     gene            complement(2997..3692)
                     /locus_tag="VKX24_12570"
     CDS             complement(2997..3692)
                     /locus_tag="VKX24_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009742149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HLJ09361.1"
                     /translation="MTPITFAHRGGRADAPENTLPAFRRALERGATGLESDARLAADG
                     EVVLIHNSTIRMGLRRVKVGDVPAARLAERGVPRLADLYAELGSGFELSLDLKEPGVA
                     GPLLAVARAAGAIDRLWLCARELADLDAVRRADPDVRLVHSMGRRAYGDALEGHASML
                     ARAGVAALNLPETEWSLGLVTLAHRFGLLAFAWDVQEYRRMRVVLEMGVDAVYSDHVE
                     RMVAAVGEWADPG"
     gene            3749..>4076
                     /locus_tag="VKX24_12575"
     CDS             3749..>4076
                     /locus_tag="VKX24_12575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HLJ09362.1"
                     /translation="MTRADSVVLLNTGHGKGKSSAAFGVMARGWARGWRVGVVQFVKG
                     GKWKTGERKLADHLGIEWHTLGDGFTWESTDLDETAAKGRHAWEVAAAKLASGDYDLL
                     ILDEITY"
BASE COUNT          518 a         1476 c         1535 g          547 t
ORIGIN      
        1 cgggtcaccg ttccgctccc attggtcggg ggagtcgagg aggcgaccct ccgggcggac
       61 atcgccgccg ccgggctcga cacccgccac gacgtcgtgg cggtcaaacc gcccgacatc
      121 ctcggtctct tcgagaagca cggcctgacc gtgacgtcga tgggccgccc ggcggccgac
      181 gacccggtgt tctttgcctg cgcggcggcg gccggtgttg tagcctccga actgatgttc
      241 cccaacgcag gcgaacccgg gtgacatggc cgaccgtctg gagcgactga cgaacctcgt
      301 cgccgtcctg ctcgagaccc ggcggccgct cacgctggag gagatcgtcg agcgggtgcc
      361 gggatacccg acggagcggg agtcgtgccg gcgccagttc gagcgggaca aggcgacgct
      421 ccgggagatc ggcgtcccga tcgccctcga ggcgctccac gccttcgacc aggagtcggg
      481 ataccggatc caccgggagg actacgagct gccgccgctc gacctcaccg acgacgagcg
      541 ggtggccctg cacctggcgg tgaccgccgt ccggctgggc ggcggaccgg ccgacgggcc
      601 ggccggcgcc ggccgggagg cgctcctcaa gctcgggggg atcgaaggcg aggcggcgcc
      661 gacgctggcc gccctgccgg acgtgccggc cctgccggct ctattcgacg cctaccgccg
      721 ccgggccccg gtgtcgttca cgtatcgggg cggcctgcgc cgtctcgacc cctacgggat
      781 cctcttccgc aacggccact ggtacgtcgt cggccgggac gccgatcggg aggccatccg
      841 ggccttccgg gccgatcgga tcgagtcgtc gatcgaggcc gggccggggg gcgggttcga
      901 gcggcccgac ggcttcgacc ccgcctcggc gctgcgggac gagccctggc gcttcggtga
      961 cgaggagccg gtcgaggccc gggtcctcgt cgggccggcc caggcggggt gggtcgaggc
     1021 cgacctcggc gcggcggcgg tggccgagcg gcgggacgac gggtcggtgg tggtgcggat
     1081 ggccgtgacc aaccgcgacg ccttccggtc ctacgtcctc ggcctcctcg accacgccga
     1141 ggtgctgggc ccggcggagc tgcgggccga catggtggcg tggctgtcga ccctggccgg
     1201 gcgggggaca gcgtgacccg gcccgacgcc gccgtccggc tccggcggct cctcacggtc
     1261 atcccctgga tcgtcgacca ccaggggagc cgcctggacg acctcgccgc ccggttcggg
     1321 atcaaggtcg ccgagctgga gcgggacctg gagctcgtcc cgttctgcgg cctgccgccc
     1381 tacacccccg accggctcat cgactgcgag atcgtcgacg gacgggtctt tctccgcttc
     1441 gccgagtact tcggccgtcc gctgcggctc acgccggccg agggcttttc gctgctcgcc
     1501 gccggccagg cgctgctggc tgtccccggg gcggacgaga aagggtccct ggcctccgcc
     1561 ctgggcaagc tggccggcgt cctcggcggc ggcgacggca tggcggtgga gctcgggccg
     1621 gcccgctacc tggagcccct gcgggcggcg gccgcggcct cggagcgggt ggagatcgac
     1681 tactacacct tcgggcgcga cgaactcacg acgcggcgga tcgacccccg ggcggtgttc
     1741 gccgccgccg gccagtggta cgtcgacgcc ttctgccaca aggcggggga cgaccggctg
     1801 ttccgggtcg accgggtccg gggcgtccgg cccaccggcg agcacttcga cgcctccacg
     1861 ccgtcggcgg caggcccggc gctgttcaac ccgcggccgt ccgaccgtcg ggtcacgctc
     1921 ctgctgaacg ccggcgccgc ctgggtggcc gagagctatc cgttggagtc cgtcgaggag
     1981 aggccggacg gtaggctgaa ggtgatactg gcggccagcg agcgtgcgtg gctggagcgg
     2041 ttgctccttc ggctcgggcc ggccgccgag gttctggatc ccgccgaagt gcgggtcgag
     2101 gcggccgagg ccgcccggcg cctcctcgaa cggtacgggt gactccgacc cctggggcct
     2161 cctgacccgg ggagcgggcg ccggcgtgcg aggatggttg tccgtggatc gcccttctga
     2221 catatctgcg gggacaccgc cggcttcgga ggctccgccc gaggcgccgc tgcccccgga
     2281 gccgccgacc gccgaccagc ccgggccgcc cctcggggag gcgccggtgg cgccggccgc
     2341 tccggccccg gccgctccgg cgccgacggc ctcggccgag gccccggagg tgatggcggc
     2401 cgttcccgcc gccgaatcgg cggaagcgga ggctccgccg gccaaggccc ggaagaaggg
     2461 caagagccgg cgcaagcagg gctacgaatg gctcgtgctg gtggcggcgt cgctggccgt
     2521 ggcgctgttc gtccgggcct tcctgatcca ggccttctac atcccgtcgg agtcgatggt
     2581 gccgacgttg ctgaccaacg accgggtcct ggtcaacaag ctgtcctacc acctccacga
     2641 cgtgcaccgg ggcgacatcg tggtgttcga cgcgccgccc ggcgccgcca ccgcccaggt
     2701 gaaggacctc atcaagcggg tgatcggcct gcccggcgac acgatcgagg gccgcaacgg
     2761 ctcgatcttc atcaacggga agccgctcga cgagccctac ctgccgcccg acgtccgctc
     2821 ccgggacttc ccgccggcca aggtcccgcc gaaggacatc tgggtgctcg gcgacaaccg
     2881 gcaggactcc cgggactcca cgttcttcgg gccgatcacc gagaggtcga tcgtcgggcg
     2941 ggccttcgtc aggatctggc ccctcgaccg cctcggcctg ctgtagccgg cgggggctac
     3001 cccgggtcgg cccattcgcc gacggcggcc accatgcgct cgacgtggtc gctgtagacg
     3061 gcgtcgactc ccatctcgag gaccacccgc atccggcggt attcctggac gtcccaggcg
     3121 aaggccagga gcccgaaccg gtgggccagc gtcaccaggc ccagcgacca ctcggtctcc
     3181 ggcaggttga gggcggcgac gccggccctg gccagcatcg aggcgtggcc ctcgagggcg
     3241 tcgccgtagg cccgccgccc catcgagtgg acgaggcgga cgtcgggatc ggcccggcgg
     3301 acggcgtcga ggtcggcgag ctcccgggcg cagagccaca gccggtcgat cgcgccggcg
     3361 gcccgggcca cggcgagcag cgggccggcc acgcccggct ccttgaggtc gagggacagc
     3421 tcgaagcccg atccgagctc ggcgtagagg tcggccagcc ggggaacgcc gcgctccgcc
     3481 agccgggcgg ccggcacgtc gccgaccttc acccgccgca gccccatccg gatggtggag
     3541 ttgtggatca ggacgacttc gccgtcggcg gccagccggg cgtcggactc cagcccggtg
     3601 gcgccgcgct ccagcgcccg gcggaaggcg ggcagcgtgt tctcgggggc gtcggcccgc
     3661 ccgccccggt gggcgaaggt gatgggggtc atggagcggt caatggtcgc atccgatcgg
     3721 cggtaatggc gcactaccct cgggcggcgt gacccgcgcc gactccgtcg tcctgctcaa
     3781 caccggccac ggcaagggga agtcgtcggc ggccttcggg gtgatggccc ggggctgggc
     3841 ccggggatgg cgggtgggtg tcgtgcagtt cgtcaagggc ggcaagtgga agacgggtga
     3901 gcgcaagctg gccgaccacc tcgggatcga gtggcacacc ctcggcgacg ggttcacgtg
     3961 ggaatcgacc gatctcgacg agaccgcggc caaaggccgc cacgcctggg aggtggcggc
     4021 ggccaagctg gcctccggcg actacgacct gctgatcctg gacgagatca cctacg
//
LOCUS       DATGJT010000722         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_306997, whole genome shotgun sequence.
ACCESSION   DATGJT010000722 DATGJT010000000
VERSION     DATGJT010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306997"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VKX24_12580"
     CDS             complement(<1..273)
                     /locus_tag="VKX24_12580"
                     /inference="COORDINATES: protein motif:HMM:NF014660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HLJ09363.1"
                     /translation="MNVSDEVPELHFASGLPGFPDARRFVLLRLGDETSPFSVLHSLD
                     DGVDLEFVVTHPALFFPDYEPEIDDDTATRLELRSADDALLLVIVTV"
     gene            complement(287..1174)
                     /gene="flgL"
                     /locus_tag="VKX24_12585"
     CDS             complement(287..1174)
                     /gene="flgL"
                     /locus_tag="VKX24_12585"
                     /inference="COORDINATES: protein motif:HMM:TIGR02550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HLJ09364.1"
                     /translation="MSSAFRITQRSLSTSALAGLQNALSQLQDTQAKLSSGKAISRPS
                     DSPSGTMNALRLRAGIDRADQLDRNASDGLARLGTTDNALQDGLSTLRSVRDAVVSGN
                     NAAMSPTDREALAEQVDGLRQSLLATANTTYLNQPIFAGTSSASAAYDPNGTYQGDTG
                     TVSRTIAPGVSVAVNATGIEAFGPAGNDIFKTLSDISNDLRTNPSNLSNDLTNLDTGY
                     VRLQNTLASVGSRYHQIDIMQQRNQVNQLDAKTQLSNVEDVDVAATTVDLQMQEVAYQ
                     AALGATARSIQPSLLDFLR"
     gene            complement(1210..>2139)
                     /gene="flgK"
                     /locus_tag="VKX24_12590"
     CDS             complement(1210..>2139)
                     /gene="flgK"
                     /locus_tag="VKX24_12590"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HLJ09365.1"
                     /translation="VDGFNQLDSALATQRSSAINELGSQIDEVNTEASQVAALNHSIA
                     SAVANGDSPNALMDQRDQLVSKLAGEVGVTVRPGDIDGTIDVFVGGTALVRGAVANPL
                     QMDVGTDPAQTVHVTWANDGYPAGVTGSTGGLLSGVNDVIPRYRSGLQAVAQQLAGQI
                     NAVHSTGYALDGSTDRDFFTTDASGRIEVNPAIVADPSLVAASGSAGATRDGSVAQKI
                     ADLSGAADGYQQLVTGLGVESAGVNRKVAVQASVVQNIDDAQQSVSGVNLDEEMTAML
                     QYQHGYDAAARFLTAIDEALSTLINSTGIVGRT"
BASE COUNT          284 a          644 c          858 g          353 t
ORIGIN      
        1 gacggtgacg atcaccagca gcagggcgtc gtcggccgac cgcagctcca gccgggtggc
       61 ggtgtcgtcg tcgatctccg gctcgtagtc ggggaagaac agcgccggat gcgtcacgac
      121 gaactccagg tcgaccccgt cgtcgaggct gtggaggacg gagaacgggc tcgtctcgtc
      181 gccgaggcgc aggagtacga accggcgggc gtcggggaag cccggcagcc cgctggcgaa
      241 gtggagttcg gggacctcgt cggagacgtt catggcgctg gaaggatcac cgcaggaagt
      301 cgaggaggga cggctggatc gagcgggcgg tggcgccgag ggccgcctgg tacgccacct
      361 cctgcatctg gaggtcgacg gtggtggcgg cgacgtcgac gtcctccacg ttggacagct
      421 gggtcttggc gtcgagctgg ttgacctggt tgcgctgctg catgatgtcg atctgatggt
      481 atcgggaccc gaccgaggcc agcgtgttct gcagccgcac gtagccggtg tcgaggttgg
      541 tgaggtcgtt cgacaggttc gacgggttgg tccgcagatc gttcgagatg tcggacagcg
      601 tcttgaagat gtcgttgccg gccggcccga aggcctcgat gccggtggcg ttgaccgcca
      661 ccgacacgcc gggggcgatg gtgcggctca ccgtgccggt atcgccctgg taggtgccgt
      721 tggggtcgta ggcggcgctg gccgatgacg tcccggcgaa gatcggctgg ttcaggtagg
      781 tcgtgttggc cgtggccagg aggctctgac gcagcccgtc cacctgttcg gcgagggcct
      841 cccggtcggt gggcgacatg gcggcgttgt tccccgagac gacggcgtcc cgcaccgagc
      901 gcagcgtcga gaggccgtcc tggagggcgt tgtcggtggt gcccagccgg gccaggccgt
      961 cggaggcgtt gcggtccagc tggtcggccc ggtcgatgcc ggcccgcagc cggagggcgt
     1021 tcatggtccc gctcggcgag tcggacgggc gggatatggc cttgcccgag gacagcttgg
     1081 cctgggtgtc ctggagctgc gagagggcgt tctgcaggcc ggccagcgcc gaggtggaca
     1141 ggctgcgttg ggtgatgcgg aaggcggagg acatggcggt gcgtcccgtc tcgatcaggt
     1201 tcggctcggt caggtccggc cgacgatgcc ggtggagttg atgagggtgc tgagcgcctc
     1261 gtcgatggcc gtgaggaagc gggccgcggc gtcgtagccg tgctggtact gcagcatcgc
     1321 cgtcatctcc tcgtcgaggt tgacgccgga gaccgactgc tgggcgtcgt cgatgttctg
     1381 gaccaccgac gcctggacgg cgaccttgcg gttgacgccg gcggactcca cgccgagccc
     1441 ggtcacgagc tgctggtagc cgtcggcggc cccggagagg tcggcgatct tctgggccac
     1501 ggaaccgtcc cgggtggcgc cggcgctgcc cgaggcggcg accagcgacg ggtcggcgac
     1561 gatggcgggg ttgacctcga tacggcccga ggcgtcggtg gtgaagaagt cccggtcggt
     1621 ggacccgtcg agggcgtagc cggtggagtg gacggcgttg atctgcccgg ccaactgctg
     1681 cgccaccgcc tggagtcccg agcggtagcg ggggatgacg tcgttgacgc cggagaggag
     1741 cccgccggtg gaccccgtca cgccggccgg gtagccgtcg ttggcccagg tcacgtggac
     1801 cgtctgggcg ggatcggtgc cgacgtccat ctggagcggg ttggcgacgg ccccccgcac
     1861 cagcgccgtg ccgccgacga agacgtcgat cgtgccgtcg atgtcgccgg ggcggacggt
     1921 gacgccgacc tccccggcca gcttcgagac gagctggtcg cgctggtcca tgagggcgtt
     1981 gggcgagtcg ccgttggcca cggccgaggc gatcgagtgg ttgagcgccg ccacctggga
     2041 cgcttcggtg ttgacctcgt cgatctgcga gccgagctcg ttgatggccg agctgcgctg
     2101 ggtggcgagc gccgagtcga gctggttgaa gccgtcgac
//
LOCUS       DATGJT010000723         3279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1547558, whole genome shotgun sequence.
ACCESSION   DATGJT010000723 DATGJT010000000
VERSION     DATGJT010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547558"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..744)
                     /locus_tag="VKX24_12595"
     CDS             complement(<1..744)
                     /locus_tag="VKX24_12595"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012934179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma-70"
                     /protein_id="HLJ09366.1"
                     /translation="MSATATAADLDDALARYRSELTAYCYRMLGSAAEADDAVQDALL
                     RAWRGFGRFEGRAGLRSWLYRIATNVCLDMLRGRSGRAMPMDLAPAADGRAKLGAPRE
                     ARQWVEPIPDSMINRPEADPAEVITSRESVRLAFVSALQYLGPRQRAVLILRDVLRWR
                     AAEVADLLDTSVDAANSTLRRARAALRVANADAQPAPAAPVEEALLARYVDAFERFDI
                     DALVSLLREDATVSMPPYELWLDGREAFRH"
     gene            complement(1391..1693)
                     /locus_tag="VKX24_12600"
     CDS             complement(1391..1693)
                     /locus_tag="VKX24_12600"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HLJ09367.1"
                     /translation="MAAYFVFRHKVLDSDTLNNDYLPKAVETLGPYEPEVLVVDENIE
                     VIEGSTEDTRTVVLKFKDKETAKRWYNSPEYQAVVGTRLGVTDGVAVLCEGFVPPA"
     gene            complement(2036..2170)
                     /locus_tag="VKX24_12605"
     CDS             complement(2036..2170)
                     /locus_tag="VKX24_12605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09368.1"
                     /translation="MTFILPGGEIVGAGTFNTADLFGGGKTLALPLTGGTRAYRNTHG
                     "
     gene            complement(2589..2924)
                     /locus_tag="VKX24_12610"
     CDS             complement(2589..2924)
                     /locus_tag="VKX24_12610"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HLJ09369.1"
                     /translation="MTPPRRGDVWLAQLDKIRPVVVLTRDPMGRILNAVVTAPVTSTV
                     RGLSTEVAVGPAEGVRHPSSVANLDQTQLVARSRLVRRVGRARPETMAALCAALAVAL
                     SCEAPTTGA"
     gene            complement(2921..3169)
                     /locus_tag="VKX24_12615"
     CDS             complement(2921..3169)
                     /locus_tag="VKX24_12615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09370.1"
                     /translation="MTITLDRAKADEARVLIGSANTSEVIDVALGRLIRAERLRRDID
                     AYRRLPPTDTDLLVALQAETSGLADDTDWAALYDDEVG"
BASE COUNT          492 a         1172 c         1129 g          486 t
ORIGIN      
        1 gtggcggaag gcctcccgcc cgtccagcca cagctcatag ggtggcatgg agacggtcgc
       61 gtcctcccgg agcagcgaga cgagggcgtc gatatcgaag cgctcgaacg cgtcgacgta
      121 ccgggcgaga agggcttcct ccaccggggc cgctggggca ggctgggcat ccgcgttcgc
      181 cacccggagc gctgctcggg cccggcgcag cgtgctgttg gccgcgtcga cactggtgtc
      241 gagcaggtca gcgacctcgg cggctctcca gcgcaggacg tcgcgcagga tcaggaccgc
      301 ccgctggcgg gggccgaggt actgaagcgc gctgacgaag gcgaggcgga ccgactcccg
      361 ggaggtgatc acctcagcgg ggtccgcctc cggtcggttg atcatagagt cgggaatcgg
      421 ttcgacccac tgccgcgcct cccggggggc gccgagcttc gcccggccgt cggcggccgg
      481 cgcaaggtcc atcggcatgg cgcggccaga acggccgcgg agcatgtcga ggcagacgtt
      541 ggtggcgatc cggtacagcc acgagcggag cccagcgcgc ccttcgaacc gcccgaagcc
      601 ccgccaggcc cgcaacaacg cgtcctgcac ggcgtcgtcg gcctccgcgg cggaaccaag
      661 catccggtag cagtaggcgg tcagctcgga ccgataccgg gcgagggcat cgtcgaggtc
      721 ggcggcggtg gcggtcgcgc tcatgccgct ctcgctcgac gggcgggcgg cggcgatccc
      781 cccgccgcct ggctcccgcc cgtgacgacc gctcttctcc cgtcaagccg ctccgagccc
      841 atgtgctccg tctcccttcc agacccgcga cgtcacctcc cgccgggcgc ccggcgccac
      901 ggcctccgat gatgtataga cgccatcgga gcccaaaact cgtcgcagcg tggacctatc
      961 actccggcga cagctcgacc cggatggcac agaatcaccc ccaggccgcc accaggccgt
     1021 tcggccagac ccggatgtcg gcgctccgat tggtccgggc tcaagggggc ccatgaaccg
     1081 cggccgatcc cgctcatcgt cacggctgcg ccttgaccag aaacgtgtcg gcgaccacgc
     1141 cccaatgccg gcgatgagcg ctgggtccga cccggccggg ccgctccgta tctgctgata
     1201 ccgctcgtcg gcggggaccg agtcgcgcca caggaggacc ctccaccgcc ccacgtgaag
     1261 ggatgccccg ccggcgcaga gagaagttcc ggcattcacc ctggccggcg atgacgcctc
     1321 ggggcgggat cgggcggcgc gatcgccaag gcaccgcggc acctgaggcc gtccaccggc
     1381 cgactgcgcg ctacgcggga ggcacgaacc cttcgcagag cacggcgaca ccgtcggtca
     1441 cacccagtcg agtaccgacc accgcctggt actccggcga gttgtaccac cgcttggcgg
     1501 tctctttgtc cttgaacttg aggaccacgg ttctcgtgtc ctcggtgctg ccctcgatca
     1561 cctcgatgtt ctcgtcgacc accagaactt caggctcgta aggaccgagg gtctcaactg
     1621 ccttgggcag atagtcgttg ttgagcgtgt cactgtcgag gaccttgtga cggaacacga
     1681 aatatgcagc cattggcatc cctctcttcc cgacccgcag ggcatcgccg gttcaggcta
     1741 gccctcagca catggggcgc cgggggccgt ctccggacgg cccaaagcag atccgagcgc
     1801 gatcccgacg gcgaggccga cgccaaggcg acgttctccc agtccggcgt ggtcgacgac
     1861 gcgctgccgt gctaccgcgc tccgggccga acccccgggc cgagaccgat gacttcttgt
     1921 cgcggaggtc gatcaccccg caccccatgc ccggctgtcc gagggggtca gctccggtga
     1981 agcacccagt tggcgtcggc gtggttgggg acgtcggcgg gtacctgcac cggccctacc
     2041 cgtgggtgtt gcggtaggcc ctggtcccgc cggtcagcgg caacgccagc gtcttgcctc
     2101 cgccgaacag gtcagcggtg ttgaacgtcc cagcgccgac gatctctccg ccggggagga
     2161 tgaaggtcac agcgcagcag cgtctcggga tgggcggcgg tcgtactcag cgtctcgcag
     2221 tcgccgccga cacggccgat atttcttccc gcctttgcgg tcgaacaagt cgccgctata
     2281 gacgtggtgg cctccggggc tgtcgccctt gtcgccgagg tcgaggctga cgtcctgggt
     2341 gtcgtgctcg tagaaccgaa ggatccgccg cgccggcgac caaacagcgg cctgcgtgtg
     2401 atcgactgac ggacgaatcg tcctctgtgc ttggccgtgg acacggaggg acagatcatg
     2461 cggaccatca cgaggctcgg cggggcggtg gcggcgacgg tgctcgtcgt gagcggttga
     2521 accatcagcg cggccggcgg cacgccggtg ccagatcggc ctgggccccg gcatcgccca
     2581 ccccccggtc aggccccggt ggttggcgct tcgcagctca gcgccaccgc caaggcggcg
     2641 cacagggcgg ccatcgtctc gggccgggcc cgcccgacgc ggcgcaccag ccggctgcgg
     2701 gccacgagtt gcgtctggtc gaggttggcc accgacgagg gatggcggac gccttcggcc
     2761 gggccgaccg ccacttcggt gctgagcccc cggacggtgg aggtgacggg ggcggtgacg
     2821 acggcgttga ggatccggcc catgggatcg cgggtgagga cgaccaccgg ccggatcttg
     2881 tccagctggg ccagccacac atccccccgc cggggcgggg tcacccgacc tcgtcgtcgt
     2941 agagcgccgc ccagtccgta tcgtcggcca gacccgacgt ctcggcctgc agggccacga
     3001 gcaggtcggt gtcggtcggt ggcagccgac ggtaggcgtc gatgtcgcgc cggaggcgct
     3061 cggcccggat gagacggccc agggcgacgt cgatcacctc cgaggtgttg gcgctcccga
     3121 tcagcacccg ggcctcgtca gccttcgccc ggtccagcgt aatcgtcacc ttctgcttcg
     3181 ccatactctg tatactactt gttgtcggta cagcaaatcc accatgatcc caccggggga
     3241 cccggtcggc accgcaccgg ccagaggacc atgccccca
//
LOCUS       DATGJT010000724         6189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1344394, whole genome shotgun sequence.
ACCESSION   DATGJT010000724 DATGJT010000000
VERSION     DATGJT010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 6189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6189
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344394"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..1447)
                     /locus_tag="VKX24_12620"
     CDS             complement(113..1447)
                     /locus_tag="VKX24_12620"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006592856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HLJ09371.1"
                     /translation="MASVLLRGGRLIDPASGTDRVCDVLIAGGVIEAVGPGLSAHGAE
                     PIDVAGAIVCPGFVDTHVHLREPGREDEETIASGSAAAALSGYTAICAMPNTDPVCDT
                     AAIAERVASAGRFLGLTQVLPAGALTQGLEGTHLAAIGEMATSSARVRLFTDDGRGVQ
                     DAALLRRAMEYVKGFGGICAEHCDVESLSHGGHMHEGVWSSRLGLGGIPAEAEELALG
                     RDLGLAKLTGVHFHALHVSTAGSVELIRRSKAEGLTVTAEATPHHLTLTDAALADYDT
                     NLKVNPPLRSPDDVEAVRQGLLDGTIDNIATDHAPHAAHEKEAEFEAAPSGLIGMETA
                     LGVLITELVGPGILGLPALVRAMSTTPARILGLAGQGGPLTAGAPANVTVFDPGARWT
                     VDPAAFASQSRNCPWAGRELTGRVVLTVFEGRVVARDGRVAGSPAGAGAGAA"
     gene            complement(1440..2453)
                     /locus_tag="VKX24_12625"
     CDS             complement(1440..2453)
                     /locus_tag="VKX24_12625"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017541920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HLJ09372.1"
                     /translation="MKHLLSVEQLSPLQIDQILKTADSFREVGTRKIKKVPTLRGRTV
                     CNLFFEPSTRTRISFELAAKRLSADVVNFVGDAKSSLSKGESFKDTAQTLQAMGVDAI
                     VVRHSSAGAPLRLSRWVEASVINGGDGAHEHPTQALLDLYSIREHFPSFKGLRVGIVG
                     DVLHSRVARSNVIALRTVGAHPILVGPPTLIPPAIESWGVEVAHDLEAVLPTLDVVYL
                     LRMQRERQNEQLVPSLREYAAFWGLDLRRTGLLKPEAVIMHPGPMNRGVEITAEVADL
                     ERSIITDQVTNGVAVRMSLLYHMLGVEERRAEQPRRPGRDSAQLALGADASEEPAGVV
                     AVG"
     gene            complement(2453..2932)
                     /gene="pyrR"
                     /locus_tag="VKX24_12630"
     CDS             complement(2453..2932)
                     /gene="pyrR"
                     /locus_tag="VKX24_12630"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018503025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HLJ09373.1"
                     /translation="MAHEILERNRGADDLVLVGIFRRGVPLAERLGNEIERIEGVRPP
                     VGALDVSFYRDDIGIRQPTEIGATDFPFDVDSTTVVLVDDVLFTGRTVRAAIDALVDF
                     GRPRAVQLAVLVDRGHRELPIRADYIGKNVPTSHRESVEVHLAETDAADSVLIVEAP"
     gene            complement(3102..3506)
                     /gene="nusB"
                     /locus_tag="VKX24_12635"
     CDS             complement(3102..3506)
                     /gene="nusB"
                     /locus_tag="VKX24_12635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018220175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HLJ09374.1"
                     /translation="MTRVPAGRRGGRKLALEALYEHDVAERPVDEILARQAPGPARSY
                     AERLVGGVREHGTAIDALIGAVAEDWTLDRMPPIDRNALRIGALELIYLGVPAGIAIN
                     EAVELAKQYSTADSGRFVNGILSRIDRDRAGV"
     gene            complement(3517..4080)
                     /gene="efp"
                     /locus_tag="VKX24_12640"
     CDS             complement(3517..4080)
                     /gene="efp"
                     /locus_tag="VKX24_12640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016698571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HLJ09375.1"
                     /translation="MISTNDMRPGMTLDIDGELWSILEYQHHKPGKGHAMVRTKVRSL
                     KSGVVVDRTFRADEKVEVARLDRREMQYLYPDDTGFVFMDNETYEQMTVAKDLAGDAG
                     RFLKEAQTVSVLMHDGQALGVDLPTTVDLVVAQTDPGLQGDRSSAGTKPATLETGAVI
                     QVPLFLTTGETVRVDTRTGSYVTRVRN"
     gene            complement(4475..5560)
                     /locus_tag="VKX24_12645"
     CDS             complement(4475..5560)
                     /locus_tag="VKX24_12645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006904761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HLJ09376.1"
                     /translation="MSAARIARLQSSGVFEGPEAVDVLYISNLVNVRYLCGFTGSNGS
                     LLIGREGAWFLTDGRYREQAPGEVSGAAIEVYTLPDQLGATLGRVGDELGAKRVGFEA
                     DHVAVSAAQRLGTHFPSAELVPTSGLVEDLRRVKEPAELDRIRRAAELADAGVAYIIG
                     KARPGVTERELAIDLESYMRREGAEAVSFPSIVAAAERSAMPHAHPTSRTVETGRFLL
                     FDLGCIFEGYCSDLTRTVVVGQADDRHREIYALVAAAQQAGLDALAAGRTGAEVVGAA
                     REVIVAAGYGEEFGHSLGHGVGLDIHEAPTLRSTSADVLEPGHVVTVEPGVYLPGWGG
                     VRIEDLTVVTTDGAEVLSHATKELLEV"
     gene            complement(5557..6018)
                     /gene="aroQ"
                     /locus_tag="VKX24_12650"
     CDS             complement(5557..6018)
                     /gene="aroQ"
                     /locus_tag="VKX24_12650"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HLJ09377.1"
                     /translation="MKVWVLNGPNLNLLGEREPELYGEQTLEDVEAMCRERGKDLGLE
                     IDFRQSNFEGELVEWLQDARKAAKGVVLNAGALSHYSRAVADAVTVATVPVVEVHITN
                     IHAREAWRDTSVISPVAWGVITGLGVHGYLLALDALAVLLAEDGGEEEDDE"
BASE COUNT          857 a         2282 c         2147 g          903 t
ORIGIN      
        1 gtattgaaga cgacctcgcc ggcgctcagg ccggcgcccg gagccgccgg ggccgcgccg
       61 aagccggcgc ccgggaagac cgccccgtcc tccaggacca gcatggcgtc agtcatgccg
      121 cccctgcccc cgcccccgcc gggctgccgg cgacccgccc gtcgcgggcg accacccggc
      181 cctcgaagac ggtcagcacc acccggccgg tcagctcccg cccggcccag gggcaattgc
      241 gcgactgcga ggcgaaggcg gccgggtcga ccgtccagcg cgctcccggg tcgaacaccg
      301 tcacgttggc cggggccccg gcggtcagcg ggccaccctg gccggccagg ccgaggatgc
      361 gggcgggcgt ggtcgacatc gccctcacca gggcaggcag gccgaggatg cccggcccga
      421 ccagctcggt gatcagcacg cccagcgcgg tctccatccc gatcagcccg gagggggccg
      481 cctcgaactc ggcctccttc tcgtgggcgg cgtgcggggc gtggtcggtg gcgatgttgt
      541 cgatcgtgcc gtcgagcagt ccctgccgca ccgcctccac gtcgtccggg gagcgcagcg
      601 gcgggttgac cttgaggttg gtgtcgtagt cggcgagggc ggcgtctgtc agcgtcaggt
      661 ggtgaggcgt cgcctcggcg gtcacggtca gcccctccgc cttcgaccgc cggatcagct
      721 cgaccgaccc ggcggtcgag acgtgcaggg cgtggaagtg gaccccggtc agcttggcca
      781 gcccgaggtc ccggcccagc gccagctcct cggcctccgc cgggatgccg cccagtccga
      841 gacgggagga ccagaccccc tcgtgcatgt ggcccccgtg cgacagcgac tcgacgtcac
      901 agtgctcggc gcagatgcca ccgaagccct tgacgtactc catcgcccgg cgcagcaggg
      961 cggcgtcctg cacccccctg ccgtcgtcgg tgaacagccg cacgcgggcc gaggaggtcg
     1021 ccatctcgcc gatcgccgcc aagtgggtcc cctccagccc ctgggtgagc gcccccgccg
     1081 gcagcacctg ggtgaggccc aggaaccgcc cggccgaggc gaccctctcg gcgatcgccg
     1141 cggtgtcgca caccgggtcg gtgttgggca tggcgcagat cgccgtgtag ccgctcaggg
     1201 cggcggcggc cgagcccgag gcgatcgtct cctcgtcctc ccggcccggc tcgcggaggt
     1261 ggacgtgggt gtcgacgaag cccgggcaga cgatcgcgcc ggcgacgtcg atcggctccg
     1321 ccccgtgggc gctgagcccc ggcccgaccg cctcgatcac cccgccggcg atcagcacgt
     1381 cgcagacccg atcggtgccc gaggccgggt cgatcagccg tccaccgcgc aggagcacgc
     1441 tagccaacag ccaccacccc ggcgggttcc tcggaggcat cggctcccag ggcgagctgg
     1501 gcggagtccc gcccgggccg ccgcggctgc tccgcccgcc gctcctcgac cccgagcatg
     1561 tggtacagca gcgacatccg caccgccacc ccgttggtca cctggtcggt gatgatcgac
     1621 cgctccaggt cggccacctc ggcggtgatc tcgaccccgc ggttcatcgg gccgggatgc
     1681 atgatcaccg cctccggctt gagcagcccg gtgcggcgca ggtcgagccc ccagaaagcg
     1741 gcgtactccc gcagcgaggg gaccagctgc tcgttctggc gctcccgctg catgcgcagc
     1801 aggtagacga cgtcgagggt cggcagcacc gcctccaggt cgtgggcgac ttcgaccccc
     1861 cagctctcga tcgccggtgg gatcagcgtc ggcggcccga ccaggatcgg gtgggcgccg
     1921 accgtccgca gggcgatcac gttggagcgg gcgacccggg agtgcagcac gtcgccgacg
     1981 atccccaccc gcaggccctt gaagctcggg aagtgctccc ggatcgagta caggtcgagc
     2041 agcgcctggg tcgggtgctc gtgcgccccg tcgccaccgt tgatcacgct ggcctcgacc
     2101 cagcgggaga ggcgcagcgg cgcccccgcc gaggagtgcc ggacgacgat ggcgtcgacc
     2161 cccatcgcct gcagcgtctg ggcggtgtcc ttgaacgact cgcccttgga caacgacgac
     2221 ttggcgtcgc cgacgaagtt gacgacgtcc gccgagagcc gcttggcggc cagctcgaac
     2281 gagatccggg tgcgggtcga cggctcgaag aacaggttgc acacggtgcg gccgcgcagc
     2341 gtcgggacct tcttgatctt gcgggtgccg acctcccgga acgagtcggc ggtcttcagg
     2401 atctggtcga tctgcagcgg ggacagctgc tcgacgctca gcaggtgctt gatcacggcg
     2461 cctccacgat caggactgag tccgccgcgt cggtctcggc gaggtggacc tccaccgact
     2521 cccggtggga ggtcggtacg ttcttaccga tgtagtcggc ccggatcggc agctcccggt
     2581 ggccgcggtc gaccagcacg gcgagctgca ccgcccgggg ccggccgaag tcgaccaggg
     2641 cgtcgatcgc cgcccgcacg gtccggccgg tgaacaggac gtcgtcgacc agcaccacgg
     2701 tggtggagtc gacgtcgaac gggaagtcgg tggccccgat ctcggtgggc tggcggatgc
     2761 cgatgtcgtc ccggtagaac gagacgtcga gggctccgac cggcgggcgg accccttcga
     2821 tgcgctcgat ctcgttgccc agccgttcgg cgagcggcac cccccggcgg aagatgccga
     2881 ccaggacgag gtcgtcggca ccgcggttgc gctcgaggat ctcgtgggcc atccgggtga
     2941 tcgcccggga aatgtccggg ccttcgagca cgaccgcctt gatcgacggc cctggctcgg
     3001 gcagctgcgc gtgcgccccg gcgtcgggca aaccaactct cctttctggc ctcacaggac
     3061 cagctttaaa ggatgacggg gctactgtac cagaggaacg gtcacacccc cgcccggtcg
     3121 cgatcgatcc gggacaggat cccgttgacg aagcggccgg agtcggcggt cgagtactgc
     3181 ttggccagct cgaccgcctc gttgatggcg atgccggccg ggacccccag gtagatcagc
     3241 tccagggccc cgatgcggag tgcgttgcgg tcgatcggcg gcatgcggtc cagcgtccag
     3301 tcctcggcga ccgccccgat cagcgcgtcg atggcggtgc cgtgctcgcg cacgccgccg
     3361 accaggcgct cggcatagct gcgggccggc ccgggcgcct gccgggccag gatctcgtcg
     3421 acgggccgct cggcgacgtc gtgctcgtag agcgcctcga gggctagctt gcggccgccg
     3481 cggcgcccag cgggcacccg ggtcacgtcg ccggccctag ttgcgcacgc gggtgacgta
     3541 gctgccggtg cgggtgtcca cccggaccgt ctcaccggtg gtcaggaaca gcggcacctg
     3601 gatcaccgcg ccggtctcca gcgtcgccgg cttggtcccg gcggagctgc ggtcgccctg
     3661 cagaccggga tcggtctggg caaccacgag gtcgaccgtc gtcggcaggt cgacaccgag
     3721 cgcctgcccg tcgtgcatca gcacgctgac ggtctgcgcc tccttgagga accggccggc
     3781 gtctccggcg aggtccttgg cgacggtcat ctgctcgtag gtttcgttgt ccatgaacac
     3841 gaagccggtg tcgtccgggt acaggtactg catctcccgg cgatccagcc gggccacctc
     3901 gaccttctcg tcggcccgga aggtgcgatc gaccacgacg ccactcttca ggctgcgcac
     3961 cttggtgcgc accatggcgt gacccttgcc cggcttgtgg tgctggtact cgaggatcga
     4021 ccacagttcg ccgtcgatat cgagcgtcat cccgggtcgc atgtcgttcg tggagatcat
     4081 gtctgctggt tccttccttg tcgttcactg gcgcggcgtt atccggggcg ggacccggcg
     4141 aggcggcgcc atagacaccg taccagccgc gcccggcgac tgccggggtt tttgtgtgcg
     4201 aataaccacc atatacgcgg ctccttacac acaaaagctc gacgctgcac gtcctggatg
     4261 tccaaactcc gggtgggcac cgcggtacca gccggcggcg gccgcccccc tggacgcccc
     4321 cctccacgcc gccccggcac gccggccccg gggcggccct gtcgacccac gttttcgatt
     4381 ctgtgagcat tccaccgcgc tatatgaggt cagatgctca cagaattgag ttgacgggga
     4441 ctcgccgtcc ggcctcgtcc agacgggcca ccggctatac ctcgagcagc tccttcgtgg
     4501 cgtggctcag cacctcggcc ccatcggtgg tgaccacggt caggtcctcg atccgtaccc
     4561 cgccccaccc gggcaggtac acgccgggct ccacggtgac gacgtggccc ggctcgagga
     4621 cgtcggcgct ggtcgagcgc agggtcgggg cttcgtggat gtccaggccg acgccgtggc
     4681 cgaggctgtg gccgaactcc tcgccgtagc ccgccgccac gatcacctcg cgggccgccc
     4741 cgacgacttc cgccccggtc ctgccggcgg ccagggcgtc cagcccggcc tgctgtgcgg
     4801 cggcgaccag ggcgtagatc tcccggtgcc gatcgtcggc ctgcccgacc acgacggtgc
     4861 gggtcaggtc cgagcagtag ccctcgaaga tgcagccgag gtcgaacagc aggaagcggc
     4921 cggtctcgac cgtccgcgag gtggggtggg cgtgcggcat ggcgctgcgc tcggcggcgg
     4981 cgacgatcga cgggaaggac accgcttccg ccccctcgcg gcgcatgtac gactccaggt
     5041 cgatcgccaa ctcccgctcg gtgacccccg ggcgcgcctt gccgatgatg taggcgaccc
     5101 cggcgtcggc cagctcggcc gctcgccgga tccggtccag ctcggccggc tccttgaccc
     5161 ggcggagatc ctcgacgagt ccggaggtcg gcaccagctc ggccgacggg aagtgcgtgc
     5221 cgagccgctg ggcggcgctg accgcaacat ggtccgcctc gaagccgacc cgcttcgccc
     5281 cgagttcgtc gccgacccgg ccgagcgtcg ccccgagctg gtcgggcagg gtgtagacct
     5341 cgatcgccgc cccgctcacc tcaccggggg cctgctcccg gtagcgcccg tcggtcagga
     5401 accaggcccc ctcccggccg atcagcagcg aaccgttgga gccggtgaag ccgcacaggt
     5461 agcggacgtt gaccaggttg gagatgtaca ggacgtcgac cgcctccggg ccctcgaaga
     5521 ccccggagga ctggagccgg gcgatgcgtg cggcgctcac tcgtcgtcct cctcctcgcc
     5581 gccgtcctcg gccagcagga ccgccagggc gtcgagcgcc agcaggtacc cgtgcacgcc
     5641 gaggccggtg atgacgcccc aggcgaccgg ggagatcacc gacgtgtccc gccaggcctc
     5701 ccgggcgtgg atgttggtga tgtggacctc gacgacgggc acggtggcga cggtgaccgc
     5761 gtcggccacc gcccgcgagt agtggctgag cgccccggcg ttgagcacga cccccttcgc
     5821 cgccttgcgg gcgtcctgca gccactcgac gagctcgccc tcgaagttcg actgccggaa
     5881 gtcgatctcg aggcccaggt ccttgccccg ctcccggcac atcgcctcga cgtcctcgag
     5941 cgtctgctcc ccgtacagct ccggctcgcg ctcgccgaga aggttgaggt tcggcccgtt
     6001 gaggacccag accttcatca cgccaggacc gccgacattg ccgccgccac ctcccgggac
     6061 ccgactctgg tcgtcacgac cgggcaaccg attccgttga gcagcaccca tcgaacccct
     6121 ccccgatact tcttatcgat cgaccatgcc gtctcgatct ccgccgggtc gaatgcggcg
     6181 gtgacggga
//
LOCUS       DATGJT010000725         2425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1344662, whole genome shotgun sequence.
ACCESSION   DATGJT010000725 DATGJT010000000
VERSION     DATGJT010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344662"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..998
                     /locus_tag="VKX24_12655"
     CDS             <1..998
                     /locus_tag="VKX24_12655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09378.1"
                     /translation="VETNLALQPTIAPNDHGIAHKSAAAVGKVGSGWALVSAGFDPAH
                     NNDGYVFAYDIPTPTSTPYPQFRKNAARTGADPSNPTPCSGGYWLVGSDGGIFSFGNA
                     AFYGSTGSLHLNKPIVGMTTTPSRHGYRFVASDGGIFSYGDAPFYGSTGSMHLNQPIV
                     GMAATPTGNGYWLVASDGGIFSYGDAHFYGSTGGMHLNKPIVGMTPTKDGHGYWLVAS
                     DGGIFAYGNAAFYGSTGNIHLNQPIVAMAATPDGLGYWFVAQDGGIFNYGNARFFGST
                     GGVALTTPIVSMTPTKTGQGYWFSSAGGSVYSFGDAGFCGSVGGSRLNAPSVGMA"
     gene            1064..2023
                     /locus_tag="VKX24_12660"
     CDS             1064..2023
                     /locus_tag="VKX24_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006040466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HLJ09379.1"
                     /translation="MRVLITGITGMAGSHLAEYCLERGDVEVVGTVRWRSPRENIAGI
                     VDRVRLVDADLRDQAGVRRLLETVDPDAIFHLAAQSYVPASWAGPADTMTTNVLGQVH
                     LLEAMRDLGLTDVPMQIAGSSEEYGLVRPEETPITEENPLRPLSPYAVSKVTQDLLGW
                     QYHRSFGLRTVRTRAFNHEGPRRGEVFVTSNFAKQIALIEAGKQAPALEVGNLEARRD
                     FHDVRDTVQAYWLAAFEGEPGDVYNIGRGEALSIREMLDILLSMAKVDVEVRPVPERM
                     RPSDVELLLCDPTKFRDRTGWQPKIPLDQTLRDTLEYWRERVS"
     gene            2020..>2425
                     /locus_tag="VKX24_12665"
     CDS             2020..>2425
                     /locus_tag="VKX24_12665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09380.1"
                     /translation="MTLEDPPDGLAVALDVTPLIGARSGVGHFVAEILDAMQGSPGIR
                     LVPYSLSLRARRGLGLGLPGLSRPAAGPSPLPAGTRQLPYPAGPAIAAWGRIDQPSVE
                     RWLAPAVVVHGTNFVVPPARRAARLVWVHDLTP"
BASE COUNT          356 a          906 c          821 g          342 t
ORIGIN      
        1 tggtcgagac caacctcgcc ctgcagccga cgatcgcccc gaatgaccac ggcatcgccc
       61 acaagagcgc cgccgccgtc gggaaggtcg gctcgggctg ggccctggtc agcgccggct
      121 tcgacccggc ccacaacaac gacggctacg tcttcgccta tgacattccg acgccgacgt
      181 cgacgccgta tccccagttc cgcaagaacg ccgcccgcac cggcgccgac ccctccaacc
      241 ccaccccctg ctccggcggc tactggctgg tcggctcgga cggcggcatc ttcagcttcg
      301 gcaacgcggc cttctacggc tcgaccggca gcctgcacct caacaagccg atcgtgggga
      361 tgaccaccac tccgagccgc cacggctacc ggttcgtggc cagcgacggc ggcatcttca
      421 gctacggcga cgccccgttc tacggctcca ccgggagcat gcacctcaac cagccgatcg
      481 tcggcatggc ggccacaccg accggaaacg gctattggct ggtggcctcc gacgggggga
      541 tcttcagcta cggcgacgcc cacttctacg gctcgaccgg cgggatgcac ctcaacaagc
      601 ccatcgtggg gatgaccccg acaaaggacg gccacggcta ctggctggtg gcctccgacg
      661 gcggcatctt cgcctacgga aacgccgcct tctacggctc caccggcaac atccacctga
      721 accagccgat cgtggccatg gccgccacgc cggacgggct cggctactgg ttcgtggccc
      781 aggacggcgg gatcttcaac tatggcaacg ccaggttctt cggctcgacg ggcggcgtcg
      841 cgctgaccac cccgatcgtg tcgatgacgc cgacgaagac cggccagggc tactggttct
      901 ccagtgccgg cggcagcgtc tacagcttcg gcgacgccgg gttctgcggc tcggtcgggg
      961 ggagccgcct caacgccccc agcgtcggga tggcgtagtt cggcgggagc accgggccgg
     1021 ccccatcatg ggtcggcccg gtgcgctgtg ctggaatgac gccatgcgcg ttctgatcac
     1081 cgggatcacc ggcatggccg gcagccatct ggcggagtac tgcctcgagc ggggcgacgt
     1141 cgaggtcgtc gggaccgtcc ggtggcggag cccccgggag aacatcgccg gcatcgtcga
     1201 ccgggtccgg ctcgtcgacg ccgacctgcg ggaccaggcc ggggtccgcc gcctgctgga
     1261 gacggtggac cccgacgcca tcttccacct cgccgcccag agctacgtcc cggcgtcgtg
     1321 ggcgggtccg gccgacacga tgaccaccaa cgtcctcggc caggtgcacc tgctcgaggc
     1381 catgcgggac ctcggcctga ccgacgtgcc gatgcagatc gccggttcct cggaggagta
     1441 cgggctcgtc cggccggagg agacgccgat caccgaggag aacccgctcc ggccgctgtc
     1501 gccctacgcc gtgtccaagg tcacccagga cctgctcggc tggcagtacc accgcagctt
     1561 cggcctgcgc acggtgcgga cccgggcctt caaccacgag gggccccgcc ggggcgaggt
     1621 gttcgtcacg tcgaacttcg ccaagcagat cgccctcatc gaagccggca agcaggcgcc
     1681 agccctcgaa gtggggaacc tggaggcccg tcgggacttc cacgacgtcc gcgacaccgt
     1741 ccaggcctac tggctggcgg ccttcgaggg cgagccgggc gacgtctaca acatcggccg
     1801 gggcgaggcg ctctccatcc gggagatgct cgacatcctg ctgtcgatgg ccaaggtcga
     1861 cgtcgaggtg cggccggtgc ccgaacggat gcgcccgtcc gacgtggaac tcctcctctg
     1921 cgacccgacg aagttccggg accgcaccgg ctggcaaccg aagatcccgc tcgaccagac
     1981 cctgcgcgac acattggagt actggcgcga gcgggtgtcg tgacgctgga ggacccaccg
     2041 gacggcctcg ccgtcgccct cgacgtcacg ccgctgatcg gggcgcgctc cggcgtcggc
     2101 catttcgtgg ccgagatcct cgacgccatg cagggctcgc cggggatccg gctcgtgccc
     2161 tactcgctca gcctccgggc ccgccggggg ttgggcctcg gcctgcccgg gctgtcccgg
     2221 ccggcggccg ggccttcgcc gctcccggcc ggcacccggc agctccccta ccccgccggg
     2281 ccggccatcg ccgcctgggg ccggatcgac cagccgagcg tggaacggtg gctggcgccc
     2341 gcggtggtgg tgcacggcac caacttcgtg gtgccgccgg cgcggcgggc ggcgcggctg
     2401 gtgtgggtgc acgacctgac gccgg
//
LOCUS       DATGJT010000726         2076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_826773, whole genome shotgun sequence.
ACCESSION   DATGJT010000726 DATGJT010000000
VERSION     DATGJT010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_826773"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="VKX24_12670"
     CDS             <1..715
                     /locus_tag="VKX24_12670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011724183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HLJ09381.1"
                     /translation="MDRLPYPAEPPMTRRKLTADPAQVIAYVRVSTEEQAVSGLGLEA
                     QETAIRAATAARGAEVIALYCDPGVSGSVPPEARPGLTAALGAVGPGQAGVLMVAKLD
                     RLTRSLLDFALLMQRSQHEGWGLVTLDLGVDTSTPQGEMMANVFATFAQFERRLIGQR
                     TKDALAVKKAQGMRLGRPVTLSAAVRERIVAERRAGATLATIAATLTADAVPTAQGGA
                     RWHPSTVQSVLRSVDLDAA"
     gene            complement(838..1743)
                     /locus_tag="VKX24_12675"
     CDS             complement(838..1743)
                     /locus_tag="VKX24_12675"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HLJ09382.1"
                     /translation="MSAQPTSPARERTLIVDFIEPFVRGRLRRHEIVRVTAQNERCHL
                     RSFADANPRVPVAKLDVRHVRRWLESIQHLAPNTRRRRWSTVHGFCEDLVQDGHLARD
                     PTLKMRAPRIPRTVPRALGAADVARVLNACPDVRARLITMMMVQLGLRCGEVASLERG
                     DIDWARGLVRITGKGAHQRILPLVDEARSALGEYLIVYPGAGGPLIRNHHPGRAGEGV
                     SADTVSGIMSRIMWDAGVKRGRRDGVSAHALRHTAATDILRAGANLRDVQTILGHSHI
                     VTTEVYLPYVVHDLGEAMNGRKYGA"
BASE COUNT          296 a          738 c          742 g          300 t
ORIGIN      
        1 gatggatcgc ctgccgtatc cggcagagcc accgatgacc cgccggaagc tcaccgccga
       61 ccccgcccag gtgatcgcct acgtcagggt cagcaccgag gagcaggccg tcagcggcct
      121 cggcctggag gcgcaggaga ccgccatccg cgccgctacc gccgcccgtg gggccgaggt
      181 gatcgccctc tactgcgacc ccggcgtgag cggctccgtc ccccccgagg cccggcccgg
      241 cctcaccgcc gccctgggcg ccgtgggccc gggccaggcc ggcgtgctca tggtggccaa
      301 gctagaccgc ctcacccgtt cgctccttga cttcgccctg ctcatgcagc gcagccagca
      361 cgagggctgg ggcctcgtga ccctggacct gggcgtggac acgtcgaccc cacagggcga
      421 gatgatggcc aacgtcttcg ccaccttcgc ccagttcgag cgccgcctca tcggccagcg
      481 gaccaaggac gccctcgccg tgaagaaggc acagggcatg cgcctcggtc gccccgtcac
      541 cctcagtgcc gccgtacgtg agcgcatcgt ggccgagcgc cgggccggcg ccaccctggc
      601 caccatcgct gccacactca ccgccgacgc cgtgccgacc gcccaagggg gcgcacgatg
      661 gcacccttcc acggtgcaat cggtgctccg gtcggtcgac ctcgatgccg cctgacactg
      721 gtgccgccgc agtgaagtcg caggtcagcg gcgtttttta agcgtgcgcc gcgcctgcac
      781 ccgcagcgca ggcgccccag ggtttgtacg acgtggggga tttcgggttt tcagtcctca
      841 ggcgccgtat tttcggccgt tcatggcctc gccgaggtcg tggacgacgt acggcaggta
      901 cacctcggtc gtgacgatgt ggctgtggcc gagaatcgtt tggacatcgc ggaggttggc
      961 gccggccctg aggatgtcgg tggccgcggt gtgccggagg gcgtgggcgg agacgccgtc
     1021 gcgccggccg cgcttcactc cggcgtccca catgatccgg ctcatgatcc cgctgactgt
     1081 gtcggcgctg acgccttccc cggcgcggcc ggggtggtgg ttgcggatga gcggcccgcc
     1141 agcgccgggg tagacgatca ggtactcgcc gagggcggag cgggcctcgt cgacgagcgg
     1201 gaggatcctc tggtgggcgc ccttgccggt gatcctcacc aggccccggg cccagtcgat
     1261 gtctccacgc tcgagggagg ccacctcgcc gcagcgaagc ccgagctgga ccatcatcat
     1321 cgtgatcaac cgggcccgga cgtccggaca ggcgttcagg acccgggcga cgtcggcggc
     1381 gccgagcgcc cgcggcaccg tccggggaat gcgaggggcc cgcattttca gcgtcggatc
     1441 ccgcgccagg tggccgtctt ggacgaggtc ctcgcagaag ccgtgcaccg tcgaccagcg
     1501 acgacgccgg gtgttcgggg cgaggtgctg gatcgattcg agccaccgcc gcacgtggcg
     1561 gacgtcgagc ttggccaccg ggacccgcgg gttggcgtcg gcgaagctcc ggaggtggca
     1621 gcgctcgttc tgggcagtca cacggacgat ctcgtgccgg cgcagccgac cccgcacgaa
     1681 cggctcgatg aagtcgacga tcagggtccg ctcacgagca ggcgacgtag gctgggccga
     1741 cacggcaacc tcctcaacag gttgacggcg tggccccggg aaggtgattc atggcaccga
     1801 cccggggcat tttcatgagc gtcgcgcgcc gaggacgccg catccagagg ttccctgtcg
     1861 caccccgccg gtacgctcgg ccagctacga ccagcccagg gccgggggcc cccggaaggg
     1921 gggtgatccg agcaagcagt taggggcccg gcccagggcc accccccgga atcagtgatt
     1981 ccggttccac cagcgctttc ggcgggggcc atcgggggtg accggagagg ggccgttcac
     2041 cggggccggt tccggggtag ccggggtgag catccg
//
LOCUS       DATGJT010000727         3563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1137341, whole genome shotgun sequence.
ACCESSION   DATGJT010000727 DATGJT010000000
VERSION     DATGJT010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3563
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137341"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VKX24_12680"
     CDS             complement(<1..281)
                     /locus_tag="VKX24_12680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018566629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HLJ09383.1"
                     /translation="MTTRHREAEVRRIYHDDAGAAGYRVLVDRLWPRGVKKIDAHLDE
                     WLRDAAPSTELRRWYGHDPERFPEFARRYRAELRRPPGSSAVDHLLRVSS"
     gene            complement(333..872)
                     /locus_tag="VKX24_12685"
     CDS             complement(333..872)
                     /locus_tag="VKX24_12685"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HLJ09384.1"
                     /translation="MYTGLLVLRVAVGLLLAGHGAQKLFGWCGGGGLTAATWFFQSVG
                     YRPPRLMAGLSAVAELVGGVALAAGLGTPLAAAVVIATMLNAAVAAHTRNRLFAIDGG
                     YGYPVGISMLAVTLGFTGAGALSLDAILDQGDGNLKGGLSALAIGLLAGIFVLRGREA
                     PPSGARPASTWLSRNRMAG"
     gene            complement(969..1520)
                     /locus_tag="VKX24_12690"
     CDS             complement(969..1520)
                     /locus_tag="VKX24_12690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09385.1"
                     /translation="MQRGLEASVRVEAEPEPVIEILSRDPAGILTGMPSPDTGTFGAE
                     IAVDLGRGASLVHEVDMAFDRRPDEGSVGRFALSWLAHDHQGALPAFRGDLEVHPDGK
                     GSRLHLSGHYSLPLGPVGRFGDQVLGHRIARRSVQGFLEAAGARIDAELAQKGQAGGS
                     GAKPPTENLTVTIDDVPTELYLG"
     gene            1749..2099
                     /locus_tag="VKX24_12695"
     CDS             1749..2099
                     /locus_tag="VKX24_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09386.1"
                     /translation="MALLVAATAMAAVALCFPPEASDAVAGDSRAIAATVTGGPTAAA
                     VMPGRMQVNRLGGVEGAPRVRGLALVAALAAAVLAHGPIRRQAARRHAQSDPPVLLRT
                     LSAPRRGPPPLQFV"
     gene            2187..>3563
                     /gene="secD"
                     /locus_tag="VKX24_12700"
     CDS             2187..>3563
                     /gene="secD"
                     /locus_tag="VKX24_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010470065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HLJ09387.1"
                     /translation="MESVRWRGLAVIAVLIAATVLIATRPARLGLDLRGGTQIVLEAR
                     ESGGQRVDGDTVARTLEVLRHRVDQMGVSEPSLQRSGDRRIIVELPGVADPDEAIAVI
                     GQTAQLTFHAVLGVDGGPVSPPPTSSSPPTNPSTDAGNDGRMLPDENGQRVRLGPPAL
                     SGDSVTTARAAFQGAWEVEVDLRGEGRRAWEQLTGAAACAPAGHPTRRIAIVLDQKII
                     SSPQVSPQVPCNEGITGGTTVITGSFTEKEAKDLALLIRAGALPVPVEVVEQRTVGPT
                     LGDAAVRASVQAAIIGAALTIVYVIAYYRLLGLLAALALVAYGAVSFATLLALGATLT
                     LPGIAGFVLAIGMAVDANVLIFERIKEEHAGGASVRAATRHGFKRAWTAIADSNATTL
                     LAAVLLFFYASGAVRGFGVTLSIGVLVSMFTALVLTRVLVAAALRSPRIAARPRLLGL
                     EVGGRLRRW"
BASE COUNT          498 a         1306 c         1211 g          548 t
ORIGIN      
        1 gaactgaccc ggaggagatg gtcgaccgca ctcgaccccg gcgggcgccg cagctccgct
       61 cggtagcggc gggcgaactc gggaaaccgc tccgggtcgt ggccgtacca tcggcgcagc
      121 tcggtgctcg gcgccgcgtc ccggagccac tcgtccaggt gggcgtcgat cttcttgacg
      181 ccccggggcc agagccggtc gacgaggacg cggtagccgg cagcccctgc gtcgtcgtgg
      241 tagatgcggc gcacctccgc ctcacgatgc cgcgtcgtca tgcgatctcc gcccgcttct
      301 tcgacctgaa tggcgtcggc gtgcgggcca tgtcagccgg ccatcctgtt tcgcgacaac
      361 catgttgaag ccggacgggc tccggatggc ggagcctctc ggccgcgcag cacgaagatg
      421 cctgccagca gtccgatggc cagcgcggac aggccacctt tgaggttgcc gtcaccttga
      481 tcgaggatgg cgtcgagtga tagagcgcct gccccggtga acccgagggt gacagccaac
      541 atcgagattc ccacggggta gccgtatccg ccgtcgatgg cgaacaggcg attgcgcgtg
      601 tgcgccgcga ccgcggcgtt caacatcgtg gcgatgacaa ccgccgctgc caatggtgtg
      661 cccaggccag cggcgagggc cacacctccg accagctccg cgacggcgga aagcccggcc
      721 atgaggcggg gaggccggta gccgacggac tggaagaacc atgttgcggc ggtgaggccc
      781 ccgccaccgc accagccgaa cagcttctgg gctccgtgac cggccagcag caacccgacg
      841 gctacccgca gcaccaacag tcctgtgtac atcgttctgc cttccctcag cggcgcacat
      901 gtcgcaccgg gacctgacgg gccgacctct tcgcaaccgg cgtcgccatg aagaccggcc
      961 cggtcccgtc aacccaggta gagctccgtt ggtacgtcgt cgatggtgac ggtcaggttc
     1021 tccgttgggg gcttcgctcc ggatccgccg gcctggccct tctgagcgag ctcggcgtcg
     1081 attcgggcgc cggccgcttc gagaaagccc tggacggagc ggcgggcgat gcggtggccc
     1141 aacacctggt caccgaagcg accgaccggt ccgaggggca acgaatagtg gcccgacagg
     1201 tgcagccgag accctttccc gtccgggtgg acttcgaggt cgcctctgaa ggcgggaagg
     1261 gcaccttgat ggtcgtgggc aagccacgac agggcgaagc ggcccacaga gccctcgtcc
     1321 ggccgccgat cgaaggccat gtcgacctcg tgcaccaggc tggcgccgcg gcccaggtcg
     1381 accgcgatct cggccccgaa ggtgccggtg tcgggtgacg gcataccggt caggatgccg
     1441 gccgggtcgc gggagagaat ctcgatgacc ggctccggct cggcttcgac ccggacactt
     1501 gcctcgaggc ctcgttgcat ggggtcaccc ttttcatgag ccgacgttct cggtgcgccg
     1561 gtcactggtc gtgtcgctcc gggccttctg aaacgtaact ctagcacatg ctagaaatat
     1621 ccgggccatg gccgcgcccg ccggcaccgg cggacgtaat ccgtacctgg cgcggcctgg
     1681 tcggcatcgc cgtcggctag ggtcggcaga ctatgggttc ccacgaccgt cgtggatggc
     1741 gggttctggt ggcactcctc gtggccgcaa ctgccatggc cgcggtcgcc ctctgcttcc
     1801 ctcccgaggc gagcgacgcc gtcgccggcg actcgagagc catcgccgcc accgtgacgg
     1861 gcggccccac cgctgcggcg gtgatgccgg ggcggatgca ggtcaatcgg ctcggcggtg
     1921 tcgaaggcgc cccccgggtg aggggccttg cgctcgtcgc cgctctggcc gccgccgttc
     1981 tcgcccatgg tcccattcgc cggcaagctg ctcgccgcca tgcgcagtcc gacccgccgg
     2041 tcctgttgcg gaccctctcc gctccccgcc gaggccctcc gccgctccag ttcgtctgat
     2101 ccttccgccc gaaggcccac cggccccacg ggcagggcgt caatcagggt gccgccgctc
     2161 cggcggccga gctggaggtc atcgccgtgg aatctgtccg ctggcgcggg ctggcggtca
     2221 tcgccgtcct catcgccgcc accgttctca tcgccacgcg gcccgcccgg ctcggccttg
     2281 atctccgggg cgggacacag atcgtgctcg aggcccggga gagcggaggc caacgggtcg
     2341 acggcgacac cgtcgcccgg acgctcgagg tgctccgcca ccgggttgac cagatgggcg
     2401 tgtcggaacc atcgctgcag cgctcgggag accgccgcat catcgtcgaa ctcccggggg
     2461 tcgctgaccc cgacgaagca attgccgtca tcgggcagac ggcgcaactg accttccatg
     2521 ccgtgctcgg cgtcgacggt gggccggtct cgccgccccc cacctcgtcg tcacccccga
     2581 cgaacccctc gactgacgcc gggaacgacg gccggatgtt gcccgacgag aacggccaga
     2641 gggtgcgcct cgggccgccc gctctctccg gcgacagcgt gacgacggcc cgggcggcgt
     2701 tccagggtgc gtgggaggtc gaggtcgacc tccggggcga ggggcggcga gcctgggagc
     2761 agctcacggg cgccgccgcc tgcgccccgg ccggccaccc gacacgccgg atcgccatcg
     2821 tcctcgacca gaaaatcatc tccagccccc aggtctctcc ccaggttccc tgcaatgaag
     2881 gcatcaccgg cggcacgacg gtcatcacgg gcagcttcac cgagaaggag gcgaaggacc
     2941 tcgccctcct catccgggcc ggagccctcc ccgtgccggt cgaggtcgtg gagcagcgga
     3001 cggtgggccc gacactgggt gacgccgcgg tccgggccag tgtgcaagcg gcgatcatcg
     3061 gcgcggccct cacgatcgtc tatgtcatcg cctactaccg gctcctcggc ctcctggcgg
     3121 ccctcgccct cgtcgcctac ggcgccgttt ccttcgccac gctcctggcg ctgggcgcca
     3181 ccctgacgct gcccggcatc gccggcttcg tcctcgccat cgggatggcc gtcgacgcca
     3241 acgtgctcat cttcgagcgg atcaaagagg agcacgccgg cggggccagc gtgcgggccg
     3301 ctacccgcca cggtttcaaa cgggcctgga cggccatcgc cgactcgaac gccaccacac
     3361 tgctggccgc cgtgttgctc ttcttctatg cctcgggggc ggtgcggggc ttcggcgtga
     3421 cgctcagcat cggggtgctc gtctcgatgt tcaccgccct cgtcctcacc cgggtgctcg
     3481 tggcggcggc gttgcgctca ccccgcatcg ccgctcggcc ccggctgctc ggcctcgagg
     3541 tcggaggccg cctccgccgc tgg
//
LOCUS       DATGJT010000728         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_826984, whole genome shotgun sequence.
ACCESSION   DATGJT010000728 DATGJT010000000
VERSION     DATGJT010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_826984"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..924)
                     /locus_tag="VKX24_12705"
     CDS             complement(<1..924)
                     /locus_tag="VKX24_12705"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF042501.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HLJ09388.1"
                     /translation="MTTTAAAPPGTTPSSRWRRLYRAVADYLAAAPGTHILLLIVAVT
                     TLVLRGLDAPTTTRILRHQSTNLFQMTRDAPRVLVLSAFLLDNGRLLVQAAYFTAIVA
                     PVERWIGTYRWLATFAAGHVGATLATTVGIWLQVRQGTEQGLVYPVDVGVSYGVVAMA
                     GVLVYRLRRPWNYLWFAVVAVRVGAAVIATGTFTDWGHLVAFGIGLAIGPLVRPDPGD
                     RRHLLAVLGAGLLAAAAFCLVLLLTVPDRDIAVPEAATTVDVTVVGRPPECGPGCHTV
                     VVRYVPPADEPDPAAPPVDGAAAGAGAGAGAA"
     gene            complement(1060..1959)
                     /gene="ligD"
                     /locus_tag="VKX24_12710"
     CDS             complement(1060..1959)
                     /gene="ligD"
                     /locus_tag="VKX24_12710"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018890550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HLJ09389.1"
                     /translation="MSSGVDVTHPDRILFPGEGITKGDVVDYYRRVAPVMVPHLRNRP
                     LMLERYREGIDHGGFYQKEASEYFPPFIRRVEVPKAGGVVHHPVVDDEDGLVYLANQG
                     CLTFHCWPARADRPRRPDRMIVDLDPPEGAFATVRAAALRLKTLLERLGLVPFVQTTG
                     SRGLHVVAPVVPGPDTDEVLEFAGVLAEVLAASDPGRLTTEFRKVNRGGRVYVDVARN
                     GYAQTVVAPYSVRARPGAPVATPLDWDEVRTTRLRPDRWTVSNVFRRLGAKADPWRTI
                     DRRARPLPDAWPRLESLAASRAS"
BASE COUNT          278 a          686 c          819 g          229 t
ORIGIN      
        1 ggcggcgccg gcgccggcgc cggcccccgc cgccgcgccg tccaccggcg gggcggccgg
       61 gtcgggctcg tcggcgggcg ggacgtagcg gacgacgacg gtgtggcagc cggggccgca
      121 ctccggcggg cgtccgacga cggtgacgtc gacggtggtg gcggcctcgg gcacggcgat
      181 gtcccggtcg gggacggtca ggaggaggac caggcagaag gctgcggcgg ccaggaggcc
      241 ggcgccgagg acggcgagga ggtggcggcg gtcaccggga tcgggccgta ccagcgggcc
      301 gatggccagg ccgatgccga aggcgacgag gtggccccag tcggtgaacg tcccggtggc
      361 gatgacggcc gccccgacgc ggacggccac gacggcgaac cacaggtagt tccagggtcg
      421 gcgcaggcgg tagacgagga cgccggccat ggccaccacg ccgtagctga cgccgacgtc
      481 gaccgggtac accagcccct gctccgtccc ctggcggacc tggagccaga tcccgacggt
      541 ggtggcgagc gtggcgccga cgtggccggc ggcgaaggtg gccagccagc ggtaggtgcc
      601 gatccagcgc tccaccgggg ccacgatggc ggtgaagtag gccgcctgga ccaggagccg
      661 cccgttgtcc aggaggaagg ccgacaggac gaggacccgg ggggcgtccc gggtcatctg
      721 gaacaggttg gtgctctggt ggcggaggat ccgggtcgtc gttggcgcgt cgaggcctcg
      781 gagaacgagg gtggtcacgg ccacgatgag caggaggatg tgggtgccgg gggcggcggc
      841 caggtaatcg gccacggccc ggtagaggcg ccgccagcgc gaggagggcg tcgtccccgg
      901 gggggcggcg gcggtggtgg tcatcgccgc tcgagcgtag ggagcgtcgc tcggtaccgt
      961 tgccgccgtt caggagcctt cagcacggga ccccccgccc agaccggcgt tcctcacccc
     1021 gtcatgacca acctcaggaa cgccagttcg ccggccaggc tacgaggccc ggctggcggc
     1081 cagcgactcg agccggggcc aggcgtcggg cagcgggcgg gcccggcggt cgatcgtccg
     1141 ccacggatcc gccttggccc cgaggcggcg gaacacgttg gagacggtcc agcggtcggg
     1201 gcggagccgg gtggtacgga cctcgtccca gtcgagcggg gtggccaccg gcgcgccggg
     1261 ccgggcgcgg accgaatagg gcgccacgac ggtctgggcg tagccgttgc gggccacgtc
     1321 gacgtagacc cgtccgcccc ggttgacctt gcggaactcg gtggtcagcc ggccggggtc
     1381 gctggcggcc agcacctcgg ccaggacgcc ggcgaactcc agcacctcgt cggtgtcggg
     1441 cccgggcacg accggcgcca ccacgtggag gccgcgggag ccggtggtct gcacgaacgg
     1501 gacgagcccg agccgctcca gcagcgtctt cagccggagg gcggcggccc gcacggtggc
     1561 gaaggcgccc tccggcgggt cgaggtcgac gatcatccgg tcgggccggc ggggccggtc
     1621 cgcccgggcc ggccagcagt ggaacgtcag gcagccctgg ttggccaggt agacgagccc
     1681 gtcctcgtcg tcgacgaccg ggtggtggac gacgccgccg gccttcggca cctccacccg
     1741 gcggatgaac ggggggaagt actccgacgc ctccttctgg tagaagccgc cgtggtcgat
     1801 gccctcccgg taccgctcga gcatgagcgg ccggttgcgg aggtgcggaa ccatgaccgg
     1861 ggccacccgc cggtagtagt cgacgacgtc gcccttggtg atgccctcgc cggggaagag
     1921 gatgcgatcc ggatgggtga cgtcgacgcc ggagctcaca tccggacgat acccaggccg
     1981 ggctcccccc agccccgccg tccgcttccg cc
//
LOCUS       DATGJT010000729         2216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1235467, whole genome shotgun sequence.
ACCESSION   DATGJT010000729 DATGJT010000000
VERSION     DATGJT010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235467"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /locus_tag="VKX24_12715"
     CDS             <1..483
                     /locus_tag="VKX24_12715"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HLJ09390.1"
                     /translation="FTLIELMVVVMIIAILVGIAIPAFLGARKRAQDTASKSDLRNGL
                     STAQTIFTDNQAYKDTAAMVTELNSEEPSLTFQSNSTASGTSKQLSVLVKTSSVTGAS
                     NNDEIILASKSGSGTCFFLRHINTAGDTTLSGSFQATSTGACTADAGDALAATSWSSL
                     "
     gene            589..1362
                     /locus_tag="VKX24_12720"
     CDS             589..1362
                     /locus_tag="VKX24_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013883829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HLJ09391.1"
                     /translation="MTGVLVLFCGLLGLAIGSFLNVVIWRVPRKLSVVRPPSHCPQCE
                     TPIRPSDNVPVVGWLRLSGKCRHCGNPIPVRYPLVEAGCGVLFAVVAARFGASWVLPA
                     YLVLTAALLAISLIDLEHFIVPDRITAPLTVAALALLGLAAVADGSGWRYGRTLLGGL
                     AFFAFLLLLNLLYPRGMGMGDVKLSFSLGLYLGWLGWGQVFLGGFLAFLLGAVVGVAL
                     IATGVKGRKDFVPFGPFLALGTMITILWGSSILRWYTGS"
     gene            1460..1618
                     /locus_tag="VKX24_12725"
     CDS             1460..1618
                     /locus_tag="VKX24_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018177296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ09392.1"
                     /translation="MVREVAELMRVSNMTVYRLIKAGDLPAIRVGKNFRIRRSDVESY
                     LGDRSYGG"
     gene            1628..>2216
                     /gene="pilM"
                     /locus_tag="VKX24_12730"
     CDS             1628..>2216
                     /gene="pilM"
                     /locus_tag="VKX24_12730"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HLJ09393.1"
                     /translation="MAERVLGLDVGTGAVRVVEVAPERPAGRGRGRAGKAPAVTRVGE
                     VPLPPGAVRDGEVLDPAAVGAAIAELWRQTGLRSRDVRVGLTGSRVVVRVVDMPAMPD
                     DELGGAVRFSAADHIPIPLEEAVLDHAVLEPAPAVEAGGAPMVRVLVAAAHRSALDGL
                     LAAVAAGGLRAVAVDLVPFALVRALTDPAAGRPAAA"
BASE COUNT          266 a          815 c          758 g          377 t
ORIGIN      
        1 ttcaccctca tcgagctcat ggtcgtggtg atgatcatcg ccatcctggt gggcatcgcc
       61 atcccggcct tcctcggcgc ccgcaagcgg gcccaggaca cggccagcaa gtccgacctg
      121 cgcaacggtc tcagcacggc gcagacgatc ttcaccgaca accaggccta caaggacacg
      181 gcggccatgg tcaccgagct gaacagcgag gagccgagcc tcacgttcca gagcaacagc
      241 acggcgtcgg gtacgtcgaa gcagctgtcg gtcctggtga agacgtcgag tgtcaccggt
      301 gcctccaaca acgacgagat catcctggca tcgaagtcgg gctcgggcac ctgcttcttc
      361 ctccggcaca tcaacaccgc cggcgatacg acgctctccg gcagcttcca ggccacgagc
      421 acgggcgcct gcaccgccga cgccggcgac gcgctggccg ccacctcttg gtcgtccctg
      481 taacggtccc cggcgagcga cgactccgaa cggagcgggc gggttctgcg atgcagcgcc
      541 cgtccgctcc gccggtcccg gcacggcggc ccctaaggtc tgtggccgat gaccggagtg
      601 ctcgtcctct tctgcggcct gctcgggctg gccatcgggt ccttcctgaa cgtggtgatc
      661 tggcgggtcc cccgcaagct gtcggtggtg cggcccccgt cgcactgccc gcagtgcgag
      721 acgccgatcc gcccgtcgga caacgttccg gtggtcggct ggctccgcct gtccgggaag
      781 tgccggcact gcgggaaccc gatcccggtc cggtacccgt tggtggaggc cggctgcggc
      841 gtcctcttcg ccgtcgtggc cgcccggttc ggggcgtcgt gggtgctccc cgcctacctc
      901 gtgctgaccg ccgccctgct cgccatctcg ctgatcgacc tggagcactt catcgtcccc
      961 gaccggatca ccgctccgct gacggtggcg gcgctggccc tgctggggct ggccgccgtg
     1021 gccgatggca gcggctggcg ctacgggcgg acgctcctcg gcggcctggc cttcttcgcc
     1081 ttcctgctcc tgctcaacct gctctacccg agagggatgg ggatgggcga cgtgaagctc
     1141 agcttctccc tcggcctcta cctcggctgg ctggggtggg gccaggtctt cctcggcggc
     1201 ttcctggcct tcctcctcgg ggcggtggtc ggggtggccc tgatcgccac cggcgtgaag
     1261 ggccggaagg acttcgtgcc cttcgggccc ttcctggccc tcggcacgat gatcacgatc
     1321 ctctggggct cgtcgattct gcggtggtac acgggctcgt aattgttggc tcgagttttg
     1381 cccgttgtac ttgtcaactt ttggttgcta aggtgtcacc gtggccatcg agcaaaacgg
     1441 cctcggcgac cgccttctca tggttcgaga ggtggctgag ctgatgcggg tgtcgaacat
     1501 gaccgtctac cggctgatca aggccggtga ccttccggcg atacgcgtcg ggaagaactt
     1561 ccgcatccgc cggtcggacg tcgagagcta cctcggcgac cgctcttacg gcggatagcg
     1621 caaacccatg gccgagcgcg tgctcggcct cgacgtcggg accggagcgg tccgcgtcgt
     1681 cgaggtcgcc cctgaacgcc ctgccgggcg cggccgcggc cgggccggca aggcccccgc
     1741 ggtcacccgg gtcggcgagg ttccgctgcc gccgggggcg gtgcgcgacg gcgaggtcct
     1801 cgaccccgcc gccgtcggcg ccgccatcgc cgaactgtgg cgccagaccg gcctccgctc
     1861 ccgggacgtc cgggtcgggc tgaccggctc ccgggtcgtc gtccgggtcg tcgacatgcc
     1921 cgccatgccc gacgacgagc tcggcggcgc cgtccgcttc tcggccgccg accacatccc
     1981 gatcccgctc gaggaggccg tcctcgacca cgccgtcctc gaaccggctc cggcggtgga
     2041 ggcgggcggg gcgcccatgg tccgggtgct cgtcgccgcc gcccaccgat cggctctcga
     2101 cgggctgttg gccgccgtcg ccgccggggg cctgcgggcc gtggcggtcg acctggtgcc
     2161 cttcgccctg gtccgggcgt tgaccgaccc cgccgcgggg cggcccgccg ctgccg
//
LOCUS       DATGJT010000730         3579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_720160, whole genome shotgun sequence.
ACCESSION   DATGJT010000730 DATGJT010000000
VERSION     DATGJT010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3579
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720160"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..590
                     /locus_tag="VKX24_12735"
     CDS             93..590
                     /locus_tag="VKX24_12735"
                     /inference="COORDINATES: protein motif:HMM:NF015693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HLJ09394.1"
                     /translation="MGRKKAADGEEAKAGGGKGKTVVLYVLAAIGVLGGLKGFVLGGG
                     GSKAAAATTGAPASTTTTKPGPIVTLDPITVNIAGDRFLKIGLGLQLSGKVSSVPAND
                     SSDPTKGYARALDITISVFGGRSYTDLVTSTGREAAKAELVKELEAAYPDQVEGVYFT
                     DFVMQ"
     gene            639..1559
                     /gene="fliM"
                     /locus_tag="VKX24_12740"
     CDS             639..1559
                     /gene="fliM"
                     /locus_tag="VKX24_12740"
                     /inference="COORDINATES: protein motif:HMM:TIGR01397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HLJ09395.1"
                     /translation="MPSPSAARDRLGPVVYDFRRPNKFTREHVRALQIAHETFARQFT
                     TVLSTTLRTVSQVQSKGIGQLTYDEYIRDVPNPTYLAILSLPPLAGAAIFHLPLPVVM
                     TAVDRLLGGPGTGPALNRPLTEIEQSLMRDLLGRVLRELAYAFESLTTLEPVVTHQES
                     NPQFAQIGAPSDMVIVFGYDLRIGAQEGSATLCIPFAALQPVLDEVTGNSLLAGRVES
                     DTDSVRDALASRMGAAPVTVSVTFRPVALPLADIVDLRPGDVLPLDHPVSLPLEVTVG
                     GVPRFEAHPGRRGKRLACVITAAADSKETA"
     gene            1556..2350
                     /gene="fliN"
                     /locus_tag="VKX24_12745"
     CDS             1556..2350
                     /gene="fliN"
                     /locus_tag="VKX24_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014374688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HLJ09396.1"
                     /translation="MSPSGPAVAAPPAVAEALAAAADAAASALPADHTWSALPADGGT
                     GADPLGSNPRAVAAGLPGLGRLVLAVAEPLADKLQIGPPPAEDLPAGLRPALVAAAAA
                     LGVDAAVLTEYAEVPLAALLAGPGEAGHGVALLDGGTPQALLTFVAPAPPAVEGHDFD
                     PLPAGGAVATGPVRPVPSGPIELLGDVEMGVTVELGRTRMLVRDILELSPGSVIELDR
                     AAGAPIDVLVNGTLIARGEVVVIDEEFGIRITEVIGHEDGARPGAR"
     gene            2356..2775
                     /locus_tag="VKX24_12750"
     CDS             2356..2775
                     /locus_tag="VKX24_12750"
                     /inference="COORDINATES: protein motif:HMM:NF016250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HLJ09397.1"
                     /translation="MDASLPALIVRVVISLGVVLGVMAGAAAVLRRSGVVGVGGIGPA
                     GGRGRGGRRPLPVEVVARRGLSRGATVTVVRLGGRTLVLGVTDHQVSLLTEIDPAELQ
                     TPDDESVTTPGAPGTAAGALPWKDVLEQLRERTVRRS"
     gene            2798..>3579
                     /locus_tag="VKX24_12755"
     CDS             2798..>3579
                     /locus_tag="VKX24_12755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011719693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09398.1"
                     /translation="MSTFRGRRVVAAGLLAFCALTLAGAAARPAAADDVPAPPDTTTT
                     VAPPDTTTTAPPDTTTTVPAPVEATTTTTTVTTVAPAAAPAVVPAAARSTTTTTRRPS
                     TTTTTVAVRVAATTAGATQVPPLTDTNTTNAPDASVTLKIPGTSGAPSQSLMIIVLIT
                     LLSVAPALLIMLTSFTRIVIVLSLTRNALGLQSIPPNQVIVGLAMFLSFFVMSPTLSD
                     INTNAVQPLLHGQKTQAQAYDAAVTPLRTFMLKQTRKAELSL"
BASE COUNT          477 a         1403 c         1223 g          476 t
ORIGIN      
        1 caaccgccgg gtggagatcg tcgtcctcgg cgacgtggcg gcggcgctcg acaacggcaa
       61 cacgaacacc ccgaacccgg gaggagggtg acatgggcag gaagaaggcg gccgacggcg
      121 aggaggccaa ggccggcggc ggcaagggca agacggtggt cctctacgtc ctggcggcca
      181 tcggggtcct cggcgggctg aagggcttcg tgctcggcgg cggcggctcg aaggccgcgg
      241 cggccacaac cggcgcgccg gcatcgacga ccaccaccaa gcccggcccg atcgtcacgc
      301 tcgatccgat caccgtgaac atcgccggcg accgtttcct caagatcggc ctcggcctgc
      361 agctgtcggg gaaggtcagc agcgttccgg ccaacgactc gagcgacccc accaagggat
      421 acgcccgggc tctggacatc acgatctccg tcttcggcgg gcggtcctac accgatctcg
      481 tcacgtcgac ggggcgggag gcggccaagg ccgagctcgt caaggagctc gaggccgcct
      541 atcccgatca ggtcgaaggg gtctacttca ccgatttcgt catgcagtag cggcaacccg
      601 ctctcagctt ccgccggccc gggtcgatcg ggggggacat gccgtccccc agcgccgctc
      661 gtgaccgcct cgggccggtc gtctacgact tccgccggcc caacaagttc acccgggagc
      721 acgtccgcgc ccttcagatc gcccacgaga ccttcgcccg gcagttcacc accgtgctgt
      781 cgaccacgct gcggacggtc tcccaggtgc agtcgaaggg catcgggcag ctgacctacg
      841 acgagtacat ccgggacgta ccgaacccga cgtacctcgc catcctgtcg ctgccgccgc
      901 tcgccggcgc cgccatcttc cacctgccgt tgccggtcgt gatgaccgcg gtcgaccgcc
      961 tgctcggcgg tcccgggacc gggccggccc tcaaccggcc gctgaccgag atcgagcagt
     1021 cgctcatgcg ggacctgctc ggccgggtgc tgcgggagct ggcctacgcc ttcgaatcgc
     1081 tgacgacgct cgagccggtc gtcacgcacc aggagtcgaa tccccagttc gcccagatcg
     1141 gcgcgccgtc ggacatggtc atcgtcttcg gctacgacct gcggatcgga gcccaggagg
     1201 ggtcggcgac actgtgcatc ccgttcgccg ccctgcagcc cgtcctcgac gaggtgaccg
     1261 gcaactcgct gctcgccgga cgggtggagt ccgacaccga ctcggtgcgc gacgccctcg
     1321 ccagccgtat gggagccgct ccggtgacgg tcagcgtcac cttccggccc gtggcgctgc
     1381 ccctcgccga catcgtcgat ctccgcccgg gcgacgtgct gcccctcgac caccccgtca
     1441 gcctgccgct cgaggtgacg gtgggcggcg ttccccgctt cgaggcccac cccggccggc
     1501 ggggcaagcg actggcctgc gtcatcaccg ccgctgccga ctccaaggag accgcatgag
     1561 cccctccggc ccggccgtcg ccgctccccc cgccgtcgcc gaggcgctgg ccgccgccgc
     1621 cgacgccgcc gcttcggcgc tgcccgccga ccacacctgg tcggctctgc ccgccgacgg
     1681 cggcaccggc gccgaccccc tcggctccaa cccccgcgcc gtggccgccg gcctgcccgg
     1741 cctcggccgg ctggtcctgg ccgtcgccga gccgctggcc gacaagttgc agatcggtcc
     1801 gcctccggcg gaggacctgc ccgcagggct ccgtccggcg ctcgtcgccg ccgcggcggc
     1861 gctcggggtc gacgccgccg tcctcaccga gtacgccgag gtgcccctgg cggcgctgct
     1921 ggccggcccg ggcgaggcgg gccacggcgt ggcgctcctc gacgggggga ccccccaggc
     1981 cctcctgacc ttcgtcgctc cggcgccgcc ggcggtggag ggccacgact tcgaccccct
     2041 cccggccggc ggggcggtgg cgaccggacc ggtccggccg gtgccctcgg ggcccatcga
     2101 gctgctgggc gacgtcgaga tgggcgtcac cgtggaactg ggccgcaccc gcatgctcgt
     2161 ccgggacatc ctcgagctga gccccggctc ggtcatcgag ctcgaccggg cggccggtgc
     2221 gccgatcgac gtcctcgtca acggaacgct gatcgcccgg ggcgaggtcg tcgtcatcga
     2281 cgaggagttc ggcatccgca tcaccgaggt catcggccac gaggacggcg cccggcccgg
     2341 agcccgttag cggcgatgga cgcctccctg cccgccctca tcgtccgcgt cgtcatctcg
     2401 ctcggggtcg tcctcggcgt catggccggc gcggcggcgg tgctgcggcg cagcggcgtc
     2461 gtcggcgtcg gcgggatcgg acccgccggg gggcggggtc ggggcggacg gcgtccgctc
     2521 ccggtggagg tcgtcgcccg gcgggggctg tcccggggag cgacggtcac cgtcgtgcgc
     2581 ctcggaggcc gcacgctggt cctcggcgtg accgaccacc aggtcagcct cctgaccgag
     2641 atcgacccgg cggagctcca gacgccggac gacgagagcg tcaccactcc cggcgcacca
     2701 gggacggccg ccggggccct gccatggaag gacgtcctcg agcaactgcg ggaacggacc
     2761 gtccgccggt cctgaacccc gctcggagtc ctttgtgatg tcgaccttcc ggggccggcg
     2821 cgtcgtcgcc gcgggcctgc tcgccttctg tgcgctgacg ctggccggcg ccgccgcccg
     2881 gccggcggcg gccgacgacg tcccggcgcc gccggacacg acgacgacgg tggcgccgcc
     2941 cgacacgacg accactgcgc ctccggacac cacgaccacg gtccccgcgc cggtcgaagc
     3001 cacgacgacg acgacgacgg tcacgaccgt cgccccggcc gccgccccgg ccgtggtccc
     3061 ggcggcggcc cgctcgacga ccacgacgac gcgccgcccg tcgaccacga ccacgaccgt
     3121 ggcggtccgg gtggcggcga ccaccgccgg cgccacccag gttccgccgc tcaccgacac
     3181 gaacaccacc aacgcccccg acgcctcggt cacgctcaag atcccgggca cgagcggggc
     3241 accgagccag agcctgatga tcatcgtgct catcacgctg ctgtcggtgg cgccggcgct
     3301 gctcatcatg ctgacgagct tcacccgcat cgtgatcgtg ctgtcgctca cccgcaacgc
     3361 cctcgggctg cagtcgatcc cgccgaacca ggtgatcgtg gggctggcga tgttcctcag
     3421 cttcttcgtg atgtcgccca cgctgtcgga tatcaacacc aacgccgtcc agccgctgct
     3481 ccacggccag aagacccagg cccaggccta cgacgccgcc gtgaccccgc tgcggacgtt
     3541 catgctgaag cagacccgca aggccgagct gtcgctgtt
//
LOCUS       DATGJT010000731         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1548369, whole genome shotgun sequence.
ACCESSION   DATGJT010000731 DATGJT010000000
VERSION     DATGJT010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548369"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /gene="orn"
                     /locus_tag="VKX24_12760"
     CDS             <1..511
                     /gene="orn"
                     /locus_tag="VKX24_12760"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF003765.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HLJ09399.1"
                     /translation="EMTGLDVERDVIVEIAALATTATTLEPLDGGLSVVVAQPPEVLG
                     AMSDFVRRMHERSGLLTEITSGVSLEEAGRKVLEYIKGHVPTPRTVPLCGNSIGMDRR
                     FLARYLPDIEEHLHYRSIDVSSIKELCRRWYPEPFAARPQKTDDHRALPDIGASISEL
                     RYYRETVFK"
     gene            546..914
                     /locus_tag="VKX24_12765"
     CDS             546..914
                     /locus_tag="VKX24_12765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011856639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLJ09400.1"
                     /translation="MKVATITVDCEDPHRLGGFWSALLGVAVVEVGEDYTELARLSED
                     GPNLLFLQVPEPKAGKNRLHLDLVVSDVKSAVDSALDLGARRAEGELGGPFPWTVLLD
                     PEGNEFCLCPPDCPGPAGQA"
     gene            complement(915..1859)
                     /locus_tag="VKX24_12770"
     CDS             complement(915..1859)
                     /locus_tag="VKX24_12770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013133356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HLJ09401.1"
                     /translation="MKRRAAIDMGTNSTRLLVADGDGASGPLTTVERHMHITRMGQGV
                     NATRRLHPDAVERTLAVLQKYRDVMDATGVDGVRATATSAARDAENRDDLFGPAAEIL
                     GAPVELLSGDEEGRLTFLGATTGLEAPAPHLVVDIGGGSTEFIVGTGPAAGTAGAAEV
                     LGVMSVDVGCVRLTEAWLHSDPPAPEELSQAISVVQAYLDDVDRELPAAGVARTLIGT
                     AGTVTTVAAVEIGLAEYDPEVLHHFRLTREAAEDVFRTLATEPAADRRHNPGLEAARV
                     DVIVGGAAVLVAVMRHWGFEEMIVSEADILDGLVRSQL"
     gene            complement(1856..>2246)
                     /locus_tag="VKX24_12775"
     CDS             complement(1856..>2246)
                     /locus_tag="VKX24_12775"
                     /inference="COORDINATES: protein motif:HMM:NF016314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF501 domain-containing protein"
                     /protein_id="HLJ09402.1"
                     /translation="GAFEVVVRNGDGTPVVIRNAPFLRDGTPMPTRYWLCDPALRQAV
                     SRLEAAGGVRAAEAAVDPSALAAAHAAYASERDAAVEAMDPAQTGPRPSGGVGGTRRG
                     VKCLHAHYAFHLAGGDDPVGRWVEERL"
BASE COUNT          301 a          810 c          832 g          303 t
ORIGIN      
        1 ggagatgacc ggcctcgacg tggagcgcga cgtcatcgtc gagatcgccg ccctggccac
       61 gacggccacg acgctggagc cgctcgacgg ggggctgtcg gtggtcgtcg cccagccgcc
      121 cgaggtgctg ggcgccatga gcgacttcgt ccgccggatg cacgagcgct ccgggctcct
      181 gaccgagatc acgtccggcg tctccctgga ggaggcgggt cggaaggtgc tggagtacat
      241 caagggacac gtcccgacgc cgcggaccgt cccgctgtgc ggcaattcga tcgggatgga
      301 ccgccgcttc ctggcccgct acctgcccga catcgaggag cacctgcact accgctcgat
      361 cgacgtctcg tcgatcaagg agctgtgccg gcggtggtac cccgagccat tcgccgcccg
      421 gccgcagaag accgacgacc accgggccct gcccgacatc ggggcgtcga tcagcgaact
      481 gcgctactac cgggagacgg tgttcaaatg atggccagat tccgatgatg ggtggtttgg
      541 ccggggtgaa ggtggcgacg atcaccgtcg actgcgaaga cccccaccgg ctgggcgggt
      601 tctggagcgc gctgctcggc gtggccgtcg tcgaggtggg cgaggactac acggagctgg
      661 cccggctgtc ggaggacggg cccaacctgc tgttcctcca ggtccccgag cccaaggcgg
      721 ggaagaaccg gctccacctc gacctcgtcg tatccgacgt gaagtcggcg gtcgattcgg
      781 cactggacct cggcgcccgc cgggcggaag gcgagctggg cggccccttc ccctggacgg
      841 tgttgctcga ccccgagggc aacgagttct gcctctgccc gccggactgc cccggcccgg
      901 caggccaggc gtagctacag ctgggagcgg acgaggccgt cgaggatgtc ggcctcggag
      961 acgatcatct cctcgaaccc ccagtgccgc atgacggcca cgaggacggc ggcgccaccc
     1021 acgatcacgt cgacccgggc cgcctccagc ccggggttgt ggcgccggtc ggcggccggc
     1081 tcggtggcca gcgtgcggaa gacgtcctcc gccgcctccc gggtgaggcg gaagtggtgc
     1141 aggacctcgg ggtcgtactc ggccaggccg atctccaccg cggccacggt ggtgaccgtg
     1201 ccggccgtgc cgatcagcgt ccgggccact ccggcggccg gcagctcccg gtcgacgtca
     1261 tcgagatagg cctgcacgac cgagatcgcc tgcgacagct cttccggcgc cggggggtcg
     1321 gagtggagcc aggcctcggt cagccggacg cagcccacgt cgacggacat gacgccgagc
     1381 acctcggcgg cgcctgccgt gccggcggcc gggcccgtcc cgacgatgaa ctccgtcgag
     1441 ccgccgccga tgtcgaccac caggtgggga gccggggcct cgagcccggt ggtggcgccg
     1501 aggaacgtga gccggccctc ctcgtcgccg gagaggagct cgaccggcgc accgaggatc
     1561 tccgccgccg gcccgaagag gtcgtcgcgg ttctcggcgt cgcgggccgc actggtggcc
     1621 gtggcccgta cgccgtcgac gccggtggcg tccatgacgt cgcggtactt ctgcaggacg
     1681 gccagcgtcc gctcgacggc gtcgggatgg agccgccggg tggcgttgac gccctgcccc
     1741 atgcgggtga tgtgcatgtg ccgttcgacg gtggtgagcg gcccggaggc gccgtcgccg
     1801 tcggccacga ggagccgggt ggagttcgtc cccatgtcga tcgccgcccg ccgcttcaca
     1861 ggcgctcctc gacccagcgc cccaccgggt cgtcgccgcc ggccaggtgg aaggcgtagt
     1921 gggcgtgcag gcacttcacg ccccgccgcg tgcctccgac gccccccgac ggtcggggcc
     1981 cggtctgggc cgggtccatg gcctccacgg cggcgtcgcg ttcggaggcg taggcggcgt
     2041 gggcggcggc cagcgccgag gggtcgaccg ccgcctcggc cgcccgcacc ccgccggcgg
     2101 cctccaaccg ggacaccgcc tggcgcagcg ccggatcgca gagccagtac cgggtcggca
     2161 tcggcgtccc gtcccggagg aacggcgcat tgcggatgac gaccggggtg ccgtcgccgt
     2221 tgcggacgac gacctcgaac gccccc
//
LOCUS       DATGJT010000732         4038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1448283, whole genome shotgun sequence.
ACCESSION   DATGJT010000732 DATGJT010000000
VERSION     DATGJT010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4038
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1448283"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1196
                     /locus_tag="VKX24_12780"
     CDS             <1..1196
                     /locus_tag="VKX24_12780"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020113392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HLJ09403.1"
                     /translation="ELVGLEPDVLAVLSRPKRVLEVSVPVRRDGGRVEVFVGWRIHHD
                     TARGPAKGGLRFHPALTKEDVAALAIAMTWKCAVVDIPFGGGKGGVRCDPSALSLAEL
                     ERVTRRYTWEILPMLGPDRDVPAPDVNTDERVMAWLMDTVAMARGDAAPGVVTGKPLE
                     VGGVQGHHGATAEGVTIMVREAFAKLGLPVAGSRVALQGFGKVGGPLAYLLSSLGVRV
                     VAVGDLMGAVTNSAGLDVAALAAHVRAHGTVAGFPLGDPLPSEQLFAVPCEAFVPAAL
                     AGAIGPAEAAALTASVVVEGANGPTTVEGDAVLADKGILVVPDILANAGGVTASYFEW
                     VQAREGYPWEPTLTAERLRARMQAAFNAVWDRSEGLGVDLRRGAHCVALDRVAAAIRF
                     RGIFP"
     gene            1484..2752
                     /locus_tag="VKX24_12785"
     CDS             1484..2752
                     /locus_tag="VKX24_12785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09404.1"
                     /translation="MRFKVPLASAVAATTIAGFAGAYAFVGGTANLSASPTSATVTAS
                     AAGLKASADTSGTIPSAGVELPIPSAPIVSSAIPSVSASVPGTGASVSVTPSGVAVTT
                     PKSVPSVTQTSGPAAAASISLPGLNVPGLGDVLKMVPAAQVPQVSGLLSSLPVNSLPV
                     IGQLLQAVPAGNLGAVTGLLGTLQGAGVANLAHVLSGLPTGDLPLVGQLLKAVPAQNL
                     PLLGNVLANMPAAGVPDLSQLLSVVSPGQLPVVGQLLTTLPAGDIPVLGNILSGLPVN
                     GLLGGLLGGVLSNITGLLNLSALSPSGLPIVSNLLPMLPTSSLPVVGDLLGTLNGSQA
                     GMVGSLLGGVPANGIPVVGNLIQTLPVGQLPIVGTMLTSVSSSAFPMVGQLLTSVSPT
                     GLPMVGSLLSILPLNDLPIAGQLLGMLPAI"
     gene            complement(2920..3648)
                     /locus_tag="VKX24_12790"
     CDS             complement(2920..3648)
                     /locus_tag="VKX24_12790"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HLJ09405.1"
                     /translation="MRPLIAVTGVPIVAGGVLGWRQGAVACTTAYLEALQRAGGDPVI
                     VPPVPLDEAEAGARLRRFDGVLLVGGGDIDPGLYGQETRSEVAHVNPARDEFEIPLVR
                     AAIARGLPTLCICRGAQVLNVALGGTLHQHISDREDLVAHRNDDGSDGVLHEVRAQPG
                     SRAMKAMGVERARTFSHHHQALDALGAGLVPVAWAEDGLLEGVELEEGWVLGLQWHAE
                     ATAGADPTQQAIFDALVRESADFT"
     gene            complement(3648..>4038)
                     /locus_tag="VKX24_12795"
     CDS             complement(3648..>4038)
                     /locus_tag="VKX24_12795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09406.1"
                     /translation="EELLRKGRLPDIPTAEEQKVFLLLLSLRGAARLHVVSHGLPDIV
                     CALPEAAVADAVRAAGGAEFPGWARLAGAARRRKASIKDTFAERLGVTVDASFVERVL
                     RSVDPASPPPELEAAMQEALAIAATLG"
BASE COUNT          506 a         1551 c         1413 g          568 t
ORIGIN      
        1 cggagctcgt agggctggag cccgacgtcc tcgccgtcct ctcccggccc aagcgggtcc
       61 tcgaggtgtc ggtgcccgtc cggcgcgacg gcggccgcgt cgaggtcttc gtcggctggc
      121 gcatccacca cgacacggcc cggggcccgg ccaagggcgg cctgcgcttc cacccggcgc
      181 tgaccaagga ggacgtcgcc gcgctggcca tcgccatgac gtggaaatgc gccgtggtcg
      241 acatcccctt cggcggcggc aaggggggag tgcgctgcga cccttcggcg ctgtcgttgg
      301 ccgagctgga gcgggtgacc cggcgctaca cgtgggagat cctcccgatg ctgggccccg
      361 accgcgacgt gccggccccc gacgtcaaca ccgacgaacg ggtcatggcc tggctgatgg
      421 acaccgtggc catggcccgg ggcgacgccg ccccgggcgt cgtcaccggc aagccgctcg
      481 aggtgggcgg cgtgcagggc caccacggcg cgacggccga gggcgtgacg atcatggtgc
      541 gggaggcctt cgccaagctc ggcctgccgg tggccggctc ccgggtggcg ctgcagggct
      601 tcgggaaggt cggcgggccg ctggcctacc tcctgtccag cctcggcgtc cgggtggtgg
      661 ccgtcggcga cctcatgggg gcggtgacga actccgccgg gctcgacgtc gccgccctcg
      721 ccgcccacgt ccgcgcccac ggcacggtgg ccggcttccc gctcggcgac ccgctgccgt
      781 cggagcagct cttcgccgtg ccctgcgagg ccttcgtacc ggcggcgctg gccggcgcca
      841 tcggcccggc ggaggccgcc gccctcaccg cctcggtggt ggtggaagga gccaacgggc
      901 cgacgacggt ggaaggcgac gccgtcctgg ccgacaaggg gatcctcgtc gttcccgaca
      961 tcctggccaa cgccggggga gtgacggcgt cgtacttcga gtgggtccag gcccgggagg
     1021 gctacccctg ggagccgacg ctgaccgccg aacggctccg ggcccggatg caggcggcgt
     1081 tcaacgccgt gtgggaccgc tccgagggcc tcggcgtcga cctgcgccgg ggcgcccact
     1141 gcgtggccct cgaccgggtg gcggccgcga tccggttccg gggcatcttt ccgtaagcgg
     1201 cgggggacag ggcgatcctc ggtctgccca ccggccgaac ggaccactcc tcctccggac
     1261 gggctagccc ggccgcagtt cagcttcggg atccgatgtc ccggtacggg cacggtgact
     1321 agtccgtcgg gaccatggaa ttagtcatcg cgggctatgg cccatagccc tgggtggcct
     1381 catcctgagc cggcgggacg aagaagccgg gcggccacct cccacctctg cctccggttg
     1441 acgacgtccg ctgatcgtga ccacaacagg aggcagaccc ccagtgcgat tcaaggtacc
     1501 cctcgcatcg gccgtggcgg cgaccaccat cgccggcttc gccggcgcct acgccttcgt
     1561 gggcggcacg gccaatctca gcgcgtcccc gacgagcgcc accgtgaccg cctcggccgc
     1621 cggactcaag gcgtcggccg atacgtccgg caccatcccc tcggccggcg tcgagctccc
     1681 catcccgtcg gcgccgatcg tttcctcggc gatcccgtcg gtctcggcct cggtgccggg
     1741 caccggcgcc tcggtgtcgg tgacgccgag cggcgtcgcg gtcaccacgc cgaagagcgt
     1801 gccctcggtg acgcagacga gcgggccggc ggccgccgcc tcgatctccc tccccggcct
     1861 caacgtcccc ggccttggcg acgttctcaa gatggtcccg gcggcccagg tcccccaggt
     1921 gagcggcctg ctctccagcc tgcccgtcaa cagcctcccg gtcatcggcc agctcctcca
     1981 ggccgtcccg gccggcaacc tcggcgccgt caccggcctg ctcggcaccc tccagggcgc
     2041 cggtgtggcc aacctggcgc atgtgctgtc gggtctcccg accggcgacc tcccgctggt
     2101 cggtcagctg ctcaaggccg tcccggccca gaacctgccc ctcctcggca acgtcctggc
     2161 caacatgccg gccgccggcg tccccgacct gagccagttg ctgtccgtcg tgagccccgg
     2221 ccagctgccg gtcgtgggcc agctgctgac cacgctgccg gccggtgaca ttcccgtcct
     2281 cggcaacatc ctcagcggcc tgccggtcaa cggcctcctc ggcggtctcc tcggcggcgt
     2341 cctcagcaac atcaccggcc tgctgaacct cagcgctctg tccccaagcg gcctcccgat
     2401 cgtcagcaac ctgctgccca tgcttccgac ctcgagcctc cccgtcgtcg gcgaccttct
     2461 cggcacgctg aacggctccc aggccggcat ggtcggcagc ctcctgggcg gcgttcccgc
     2521 caacggcatc cccgtcgtcg gcaacctgat ccagacgctc ccggtcggcc agctgcccat
     2581 cgtcggcacg atgctcacct cggtcagcag ctcggccttc ccgatggtcg gccagctcct
     2641 gacctcggtc tcgccgaccg gcctcccgat ggtcggcagc ctgctcagca tcctgcccct
     2701 gaacgacctg cccatcgccg gccagctcct cggaatgttg ccggcgatct gagaaaccca
     2761 gcaccattcg ccaccgccac accgttgagg cccgccaccc ggcgggcctc aacgcgttgg
     2821 ccgcgacggc ggccgcccgg cacaccgcca tccggatgta taggcgaagg gtgccgatgc
     2881 ggcgaagccg ccttcggcgg ccgccgccta taatccgggt tatgtaaagt cggcgctttc
     2941 ccggaccagg gcgtcgaaga tggcctgctg ggtgggatcg gcgccggcgg tcgcctcggc
     3001 gtgccactgg aggccgagca cccacccctc ttccagctcc acgccttcca gcagcccgtc
     3061 ctcggcccag gccaccggga cgagcccggc tccgagggcg tcgagggcct ggtggtgatg
     3121 cgagaacgtc cgggcccgct cgacgcccat ggccttcatc gcccgggacc cgggctgggc
     3181 ccgcacctcg tggaggacgc cgtcgctgcc gtcgtcgttg cggtgggcga cgaggtcctc
     3241 ccggtcgctg atgtgctggt gcagcgtccc gccgagggcg acgttgagga cctgcgcgcc
     3301 ccggcagatg cacagcgtcg gcaggcccct ggcgatggcc gcccggacca gcgggatctc
     3361 gaactcgtcg cgggcggggt tcacgtgggc gacctcggac cgggtctcct ggccgtagag
     3421 gccggggtcg atgtctccgc cgccgaccag gaggactccg tcgaagcgcc ggaggcgggc
     3481 gccggcctcg gcctcgtcga gcgggacggg cgggacgatg acggggtctc ccccggcccg
     3541 ttgcagcgct tcgaggtagg cggtcgtgca ggccaccgct ccctggcgcc agccgagcac
     3601 gccgccggcc acgatcggga cgccggtgac ggcgatgagc ggacgcatca cccgagggta
     3661 gcggcgatgg ccagcgcctc ctgcatggcc gcctcgagct ccggcggcgg cgacgccgga
     3721 tcgaccgacc ggaggacccg ctccacgaag gaggcgtcga cggtgacgcc gagccgctcg
     3781 gcgaaggtgt ccttgatcga ggccttccgc cgccgggcgg caccggccag gcgggcccag
     3841 ccggggaact ccgctccccc ggccgcccgc acggcgtcgg cgacggcggc ctcgggcagg
     3901 gcgcagacga tgtcgggaag gccgtgggag acgacgtgca gccgtgccgc cccccgcagc
     3961 gagaggagca gcaggaacac cttctgctcc tcggccgtcg ggatgtcggg caggcggccc
     4021 ttgcggagca gttcctcc
//
LOCUS       DATGJT010000733         5477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_508944, whole genome shotgun sequence.
ACCESSION   DATGJT010000733 DATGJT010000000
VERSION     DATGJT010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5477
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508944"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1107)
                     /locus_tag="VKX24_12800"
     CDS             complement(<1..1107)
                     /locus_tag="VKX24_12800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLJ09407.1"
                     /translation="MDTSYDVVLVDDADDVRAVVGAQLRLSRRFTVVGEGATGADAIA
                     LAAAHRPAVMVLDASMPDMDGLEALPAVLEASPATRVVMFSGFSGPALETAARALGAA
                     DFVEKATPLRELPERLLRVLGADPSSAAGASGAVDAESQQELARHLERFRTVFDQAAI
                     GMATMTLAGTVARVNPALLRLTGESEATLVGRHYYDLTGSGPDDAVRDALMQVAGGRA
                     EAAEVEHPLPVRGTGTAVWLRSTVTVVRDPDGRAQYFLAQAEDVTAQRRAIDELRASE
                     ERFRLLVESVMDYAIFMLDPGGFVSTWNIGAERMKGYRADEIVGRHFRVFYPPEAQAR
                     RHPEHELEIAVREGRYEEEGWRIRKDGSAFWANVV"
     gene            1175..1966
                     /locus_tag="VKX24_12805"
     CDS             1175..1966
                     /locus_tag="VKX24_12805"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLJ09408.1"
                     /translation="MTAVTVLLVEDVVELRSVLRQALQLRGGFEVVGEVGDGAAAITA
                     AARLQPDVVVLDLGLPDIAGHEVLTRLRRVAPVARVVVYTGSLTPERFPLAREVEAYI
                     SKENDIGYVVELIGRLPARPWRTAVVDLGPHPADVPAARRFLAEQLQRWGCAELVEDA
                     YVVVTELVTNAFVHAGTRCELRVGLTDRALRLQVTDYGTGMPDPRTADERAEHGRGLL
                     LVSALSVGWGVEALPGGGKVVWAELLRSGDGVDDTGALAANGPPG"
     gene            1994..2539
                     /locus_tag="VKX24_12810"
     CDS             1994..2539
                     /locus_tag="VKX24_12810"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HLJ09409.1"
                     /translation="MTSVNHPSGSSTLADLEAMPTNDGKRYELVDGHILVTPWPAHYG
                     GTSFRLGPILSHAVPPGHASYRLCRLDLPDGQRVIPDLMVAPHSSVGDQGVHTPVLLI
                     VDVLAGLGEDDMARKRAAYVNADVPAYWVIDAEKPLCTCLRLEDGEYRVYAEGPVIEV
                     DWPLAVSFDVADVSRPQGATT"
     gene            complement(2592..3089)
                     /locus_tag="VKX24_12815"
     CDS             complement(2592..3089)
                     /locus_tag="VKX24_12815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09410.1"
                     /translation="MLRKAVIMLGASLTLAFGAFAVGTVPSGAESGSHCTFQHTPNLN
                     PGVSYNQTSGTFTDPGGGTVKCSGAVNGSGDYTDSGTYTNATCQSGGTAEGDPTFTIN
                     GQTFTDHVHITFGKEPPNFPNGLVRATFEGSRVKGTIDLMPTKGDCMDSPVTQIRGKG
                     EFDMS"
     gene            3224..4159
                     /locus_tag="VKX24_12820"
     CDS             3224..4159
                     /locus_tag="VKX24_12820"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLJ09411.1"
                     /translation="MGIAPVNGCFTSGLTTLLDVLQVAEGLRRSLNAEIPGIDVEIGG
                     LSDTVVTRNGLTASVSRRLDRDGFADLDVLVVPSLGAGASAEALEDALDREDIHQLID
                     VLRNTPLPPVVAAACSGTFVLAQAGLLDGHVATTSWFLTGTFQRRYPRVGLDMSRMVV
                     RSGPFITAGAGFAHIDLGLSLVSGLSRELAAMVARYMLIDERPSSTLDLAQVYLGSID
                     ELVTEFESWVRAHLSEPIKIADAVTALGTTRKTLERHTRERAGTTPHAIIQRIRVEQA
                     VHLRRTTNLNATQIARAVGYRNASTLRQLIRSETG"
     gene            complement(4215..>5477)
                     /locus_tag="VKX24_12825"
     CDS             complement(4215..>5477)
                     /locus_tag="VKX24_12825"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HLJ09412.1"
                     /translation="ADASTLDEVAPVLLETLGHGLRWDGGAVWRHDGELLKPVACWPD
                     SPGSVARVMAEARAIKRPEGLPGHVAASGEAFWIETVSSDSIFVRQECAERAGVRSCF
                     AFPIAVGGDVIAVVEMYSRARQGPEPELLAVLDTAGREIGRYLERAESRRHLVEMAEA
                     LQASLLPPLSPTIPGLDIAVRYRAAGGEGQIGGDFFDVFPLPDGEWVVLIGDVSGRGP
                     RAAALTALARYTLRAAAIGAASPSAVLTVLNDVVRRELEVAYQGDERFLTVAYLAIAP
                     SASGFNVIAACGGHPQPLARRADGTVEAVPCQGDLIGSFHVHEAHDERLELQPEDVLV
                     LVTDGVIEARGATGEFGEDRLRQVVSSAGRTALEVADAIQTAVVSHLDGRSQDDLAIV
                     VIRLPSSTSMATSIQMHVPRPAAQTEAP"
BASE COUNT          748 a         1950 c         1973 g          806 t
ORIGIN      
        1 gaccacgttg gcccagaagg cgctgccgtc cttgcggatc cgccagccct cctcctcgta
       61 gcggccctcc cggacggcga tctccagctc gtgctcggga tggcgccggg cctgggcctc
      121 cgggggatag aagacccgga agtgccgacc gacgatctcg tcggcccggt accccttcat
      181 gcgttcggcc ccgatgttcc aggtgctgac gaagccaccg gggtcgagca tgaagatggc
      241 gtagtccatg acgctctcca ccagcagccg gaagcgctcc tcgctggccc gcagctcgtc
      301 gatcgcccgc cgctgggcgg tgacgtcctc ggcctgggcg aggaagtact gcgcccggcc
      361 gtcgggatcg cgcaccaccg tgaccgtcga ccgcagccac acggcggtgc cggtcccccg
      421 gacgggcagc gggtgctcga cctcggccgc ctcggcgcgg cctccggcca cctgcatcag
      481 ggcgtcccgc acggcgtcgt ccggacccga cccggtgagg tcgtagtagt ggcggccgac
      541 gagcgtcgct tcgctctcgc ccgtcaggcg gagaagggcg gggttcaccc gggccaccgt
      601 tcccgccagc gtcatcgtgg ccatgccgat ggcggcctgg tcgaagacgg tgcggaaccg
      661 ctccaggtgc cgggccagct cctgctggct ctcggcgtcg accgcgccgg acgccccggc
      721 ggcggaggac gggtcggcgc cgagcacgcg cagcaggcgc tccggcagct cccgcagcgg
      781 tgtggccttc tccacgaagt cggcggcccc gagggcccgg gcggccgtct ccagcgccgg
      841 tccgctgaac cccgagaaca tcacgacgcg ggtggcgggc gaggcctcga ggacggccgg
      901 cagcgcctcg aggccgtcca tgtcgggcat cgaggcgtcg agcaccatga ccgccggccg
      961 gtgggcggcg gccagggcga tggcgtcggc gccggtggcg ccctcgccga ccacggtgaa
     1021 gcgccggctc agccggagct gggctcccac gaccgcccgg acgtcgtcgg cgtcgtcgac
     1081 gaggaccacg tcgtagctgg tgtccacggc ctcacgctac ccagcgacgt ccggtggaat
     1141 tcggctcgtc gcgccgttgg tagcctcacg gttcgtgacc gcggtgaccg ttctgctcgt
     1201 cgaggacgtc gtcgagctgc ggtccgtgct ccgccaggcg ctccagctgc ggggcggctt
     1261 cgaggtcgtc ggcgaggtcg gcgacggggc ggcggcgatc acggccgccg cccgcctcca
     1321 gcccgacgtc gtggtcctcg acctcggcct gcccgacatc gccggccacg aggtcctgac
     1381 ccggctgcgg cgcgtggcgc cggtggcccg ggtcgtcgtc tacaccgggt cgctcacgcc
     1441 cgagcgcttc ccgctcgccc gcgaggtcga ggcctacatc agcaaggaga acgacatcgg
     1501 ctacgtcgtc gagctgatcg gccgcctgcc ggcccggccg tggcggacgg cggtggtcga
     1561 cctcgggccg caccccgccg acgtccccgc cgcccgccgc ttcctggccg agcagctgca
     1621 gcgctggggc tgcgcggagc tcgtggagga cgcctacgtc gtcgtcaccg agctcgtcac
     1681 caacgccttc gtccacgccg gcacgcgctg cgagctgcgg gtcgggctca ccgaccgggc
     1741 cctgcggctc caggtcaccg actacgggac ggggatgccc gacccccgga cggcggacga
     1801 gcgggcggag cacggccggg gcctgctgct ggtgagcgcc ctctccgtcg gctggggcgt
     1861 cgaggccctg cccggcggcg gcaaggtcgt ctgggccgag ctgctgcgct ccggcgacgg
     1921 cgtcgacgac accggcgccc tggcggccaa cggtccgccc ggctgaccgg cggcgatttg
     1981 gaagaatggc gccatgactt ccgtcaacca cccgtccggc agctcgaccc tggccgacct
     2041 cgaggcgatg ccgaccaacg acggcaagcg ctacgaactg gtcgacgggc acatcctggt
     2101 gaccccctgg cccgcccact acggcggcac gtcgttccgc ctcgggccga tcctttccca
     2161 cgccgtgccg cccggccacg cgtcctaccg gctgtgccgg ctcgacctgc ccgacgggca
     2221 gcgggtcatc cccgatctca tggtggcgcc ccacagctcc gtgggcgacc agggcgtgca
     2281 cacgccggtg ctgctcatcg tcgacgtcct cgccgggctc ggcgaggacg acatggcccg
     2341 caagcgggcg gcctacgtca acgccgacgt ccccgcctac tgggtgatcg acgccgagaa
     2401 gccgctgtgc acctgcctgc ggctggagga cggcgagtac cgggtctacg ccgaagggcc
     2461 ggtgatcgag gtggactggc cgctggcggt cagcttcgac gtcgccgacg tctcccgccc
     2521 gcagggggcg acgacgtaga agcgcccggg gcacggcccc gggcgcttcg tgcaaccgac
     2581 tcggggtcgg gctagctcat gtcgaattcg cccttgccgc ggatctgggt gacggggctg
     2641 tccatgcagt cacccttggt cggcatgaga tcgatggttc ccttgacccg ggagccctcg
     2701 aaggtggctc ggacgaggcc gttggggaag ttcggcggtt ccttgccgaa ggtgatgtgg
     2761 acgtggtcgg tgaaggtctg cccgttgatg gtgaaggtgg ggtcgccttc cgccgtcccg
     2821 ccgctctggc aggtggcgtt ggtgtacgtc ccgctgtcgg tgtagtcgcc ggaaccgttg
     2881 acggcgccgg agcacttgac ggtgccgccg ccggggtcgg tgaaggttcc ggaggtttgg
     2941 ttgtaggaga cgccggggtt caggttaggc gtgtgctgga acgtgcagtg gctccccgac
     3001 tccgccccgg acgggacggt gcccacggca aaggcgccga aggccagcgt cagggaggca
     3061 ccaagcatga tgaccgcctt gcgcaacatg tggtctctcc tcatgggccc cgcggatcgg
     3121 agccatggtc gccagtctcg caggaaacgg cgccgaaatg ggaacgaatc gcgacagaat
     3181 gcgcggcgtt tcggaccact tcgatatcgt ttgcgacatg cgtgtgggta tcgctcccgt
     3241 caatggctgc ttcacctcag ggctcacgac cctgctcgac gtgctccagg tggccgaagg
     3301 gctccgccgg tccctcaacg ccgagatccc cggtatcgac gtggagatcg gcggactgtc
     3361 cgacaccgtg gtcacccgca acggcctcac cgcctccgtg agccgccggc tcgaccgcga
     3421 cggcttcgcc gacctcgacg tgctcgtcgt gccgagcctg ggggccggcg ccagcgccga
     3481 ggccctggag gacgccctcg accgggaaga cattcaccag ctgattgacg tattgcggaa
     3541 caccccgctc ccgccggtcg tggccgccgc ctgcagcggc acgttcgtgc tggcgcaggc
     3601 aggtctcctc gacggccatg tggccacgac gagctggttc ctcaccggca cattccagcg
     3661 ccgatatccc cgcgtcggcc tcgacatgtc ccggatggtc gtccgcagcg gcccgttcat
     3721 caccgccggt gccgggttcg cccacatcga cctcggcctc tcgctcgtga gcgggttgag
     3781 ccgggagctg gccgccatgg tggcccggta catgctcatc gacgagcgtc cctcttcgac
     3841 gctcgacctg gcccaggtct atctgggctc gatcgacgag ctcgtcaccg agttcgagag
     3901 ctgggtccgg gcgcacctct cggaaccgat caagattgcc gacgccgtca ccgccctcgg
     3961 caccacccgc aagaccctcg agcgccacac ccgggagcgg gccggaacga cgccgcacgc
     4021 catcatccaa cggatccggg tcgagcaggc cgtccatctg cgccggacga cgaacctgaa
     4081 cgcgacccag atcgcccggg ccgtcggcta tcgcaacgcc tcgaccctcc ggcagctgat
     4141 ccgctccgag accggttagc ggaaacaaca ggtttcgggt ggagccacct cccggacgcg
     4201 cagtgtcgcc cgccttatgg ggcctcggtt tgtgccgccg ggcgggggac gtgcatctgg
     4261 atggacgtcg ccatgctggt cgaggacggc aggcggatca ccacgatggc caggtcgtcc
     4321 tggctccggc cgtcgagatg ggagacgacc gcggtctgga tggcgtcggc gacctccagc
     4381 gcggtccggc cggccgagct gacgacctgg cggagccggt cctccccgaa ttccccggtg
     4441 gcgccccggg cttcgataac gccgtcggtc acgaggacga gaacgtcttc gggctgcaac
     4501 tcgagccgct cgtcgtgggc ttcgtggacg tggaacgatc cgatgagatc gccctggcag
     4561 ggaacggctt cgacggttcc gtccgcccgc cgggcgagcg gctgggggtg gcctccgcag
     4621 gcggcgatga cgttgaagcc gctggccgag ggggcgatgg ccaggtaggc cacggtgagg
     4681 aaccgctcgt cgccctggta cgccacttcc agttcccggc gtaccacgtc attcaggacg
     4741 gtgaggacgg cgctgggaga ggcggcgccg atggcggccg cccgcagcgt gtagcgggcc
     4801 agggcggtga gagcggcggc tcgggggcct cgcccggaga cgtcgccgat gaggacgacc
     4861 cattccccgt cgggaagggg gaagacgtcg aagaagtcgc cgccgatctg cccttcgccg
     4921 ccggcggccc ggtagcggac ggcgatgtcg aggccgggga tggtcggtga caagggcggc
     4981 aacaggctgg cctggagtgc ttcggccatc tcgaccaggt gccggcgcga ctcggcgcgt
     5041 tcgaggtagc gaccgatctc ccggcccgcg gtgtcgagca cggcgaggag ttccggctcg
     5101 gggccctggc gggcgcggct gtacatctcg acgacggcga tgacgtcgcc gcccaccgcg
     5161 atggggaacg cgaagcagga ccggacgccg gcccgttcgg cgcattcctg gcggacgaaa
     5221 atgctgtcgc tcgagacggt ttcgatccag aacgcttcgc cgctcgcggc gacgtgcccg
     5281 gggagtcctt cgggacgttt gatcgctcgg gcttcggcca tgacccgggc caccgagccc
     5341 ggcgagtcgg gccagcaggc gaccggcttc aagagctccc cgtcgtggcg ccagacagcg
     5401 ccgccgtccc agcgcaggcc gtggccgagt gtttccagca ggacgggggc cacctcgtcg
     5461 agcgtcgagg cgtcggc
//
LOCUS       DATGJT010000734         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_827287, whole genome shotgun sequence.
ACCESSION   DATGJT010000734 DATGJT010000000
VERSION     DATGJT010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827287"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VKX24_12830"
     CDS             complement(<1..987)
                     /locus_tag="VKX24_12830"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLJ09413.1"
                     /translation="MDHRAPAAPPAAGGRFAVDAPIPGEWAAWWATPVPARLYSAALV
                     VAAVAVSLAAAAARSFGAGAIGAAMALAAAGMTVVELGRLAEGGRVQQQRIHKGLSAW
                     PLAAALLLPAGLAGWVAAAVYVHARARGIRITRWKWIGSWAIVTLAAAAATAVFQRVA
                     GGPLGPSGSGRVFAGVAAAMAVFLAVEAAAFFAISRLNRIDDERYLRAQLASPAFYGV
                     EAAVLVSGALTAVVYAYWAGFLLLAGPIYLLLQRGMLHEPLRDEARHDAKTGVFNSEA
                     WRAAAGSALAHTRRQEQQLVAVIVVDIDHFKAVNDVFGHLAGDDVIARTAATI"
     gene            1169..1423
                     /locus_tag="VKX24_12835"
     CDS             1169..1423
                     /locus_tag="VKX24_12835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09414.1"
                     /translation="MRRSVLVVATAALTAALASPAWAAGHDPRYRHHDRYRGDYYDYP
                     DHHEPYWEDGPYDGYYDCYRRPDSHGNPQTWCDHYWGRRP"
     gene            1454..>2027
                     /locus_tag="VKX24_12840"
     CDS             1454..>2027
                     /locus_tag="VKX24_12840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012257102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLJ09415.1"
                     /translation="MRVVVTGGAGFLGSHVCDALVDRGDDVVCVDNLCTGRKDNIAHL
                     VGRANFTFVGRDVTTGVDVDGPVDLVMHLASPASPPEYLRLGIETLEVGSLGTIQTIR
                     LALAKGARYFLASTSEVYGDPLVHPQPETYWGNVNPVGPRSVYDEAKRFAEAVTMAYH
                     RHRGLDVRISRTFNTYGPRMRADDGRVVTNF"
BASE COUNT          295 a          757 c          729 g          246 t
ORIGIN      
        1 gatcgtcgcc gccgtccggg cgatgacgtc gtcgccggcc aggtgcccga agacgtcgtt
       61 gacggccttg aagtggtcga tgtcgacgac gatcacggcg acgagctgct gctcctgacg
      121 gcgggtgtgg gccagcgccg agccggccgc cgcccgccac gcctcagaat tgaagacgcc
      181 ggtcttggcg tcgtggcggg cctcgtcgcg cagcggctcg tggagcatcc cccgctgcag
      241 cagcaggtag atcggcccgg cgaggagcag gaagcccgcc cagtaggcgt agacgacggc
      301 ggtcagggcg ccggagacga gtaccgccgc ctccacgccg tagaacgccg ggctggccag
      361 ctgggcccgg aggtagcgct cgtcgtcgat gcggttgagg cgggagatgg cgaagaacgc
      421 cgcggcctca acggcgagga acacggccat ggcggcggcg accccggcga agacccgccc
      481 ggagccggac gggccgagcg gcccgccggc gacgcgctgg aagacggccg tggccgccgc
      541 cgcggccagc gtcacgatgg cccacgagcc gatccacttc cagcgggtga tccggatgcc
      601 gcgggcccgg gcgtggacgt agacggccgc cgccacccag ccggccagcc ccgccggcag
      661 cagcagcgcc gccgccagcg gccaggccga cagccccttg tggatccgct gctgctggac
      721 gcgcccgccc tcggccagcc ggccgagctc caccacggtc atgccggcgg cggccagggc
      781 catggccgcc ccgatcgccc cggccccgaa cgaccgggcg gcagccgccg ccaggctcac
      841 ggccacggcg gcgacgacga gggcggcgct gtagagccgg gccggcaccg gcgtcgccca
      901 ccaggccgcc cattcgccgg gaatcggggc gtcgacggcg aaccggccgc cggcggccgg
      961 tggcgcggct ggcgctctgt ggtccaacgt cggcaacccc tggccccctg tacgtctttc
     1021 ccgtatccat cggccgggcc ggggccgtcc tgagtccccg cggccccttt cggccggctt
     1081 ggggagccgg ttgggccgga gttgagactc cgatctctgg gtagcggacg gagcgtcagc
     1141 atccaccgac acgacaagga gagggccgat gcgccgatcc gtcctggttg tggcgaccgc
     1201 ggcgttgacc gcggcgctgg cgtcaccggc ctgggccgcc ggccacgacc cccgctaccg
     1261 gcaccacgac cggtaccggg gcgactacta cgactacccc gaccatcacg agccctactg
     1321 ggaggacggg ccctacgacg gctactacga ctgctatcgc cggcccgact cccacggcaa
     1381 tccgcagacg tggtgcgacc actactgggg gcgccggccc tgagtccgcc cggagtcggg
     1441 catcatggcc ggcatgcgcg tcgtcgtcac cggaggggcc gggttcctgg gctcacacgt
     1501 ctgcgacgcg ctggtcgacc ggggggatga tgtcgtctgc gtcgacaacc tctgcaccgg
     1561 ccggaaggac aacatcgccc acctggtcgg ccgggcgaac ttcaccttcg tcgggcggga
     1621 cgtcaccacc ggcgtcgacg tcgacggccc ggtcgacctc gtcatgcacc tggccagtcc
     1681 ggcgtcgccg ccggagtacc tgcgactggg catcgagacg ctcgaggtcg gcagcctcgg
     1741 cacgatccag acgatccgac tggcgctggc gaagggcgcc cgctacttcc tggcctcgac
     1801 cagcgaggtc tacggcgatc cgctcgtcca tccccagccg gagacgtact gggggaacgt
     1861 caacccggtc ggccctcgca gcgtctacga cgaggccaag cgcttcgccg aggccgtcac
     1921 gatggcctac caccgccacc ggggcctcga cgtccgcatc agccggacgt tcaacaccta
     1981 cgggccccgg atgcgggccg acgacggccg ggtggtgacg aacttcg
//
LOCUS       DATGJT010000735         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_720415, whole genome shotgun sequence.
ACCESSION   DATGJT010000735 DATGJT010000000
VERSION     DATGJT010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720415"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..761)
                     /locus_tag="VKX24_12845"
     CDS             complement(6..761)
                     /locus_tag="VKX24_12845"
                     /inference="COORDINATES: protein motif:HMM:TIGR03936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03936 family radical SAM-associated protein"
                     /protein_id="HLJ09416.1"
                     /translation="MSDRLRVRFAKLGKVRFTSHRDVARMWERALRRTGLAVASSQGF
                     TPRPLVAFGLALPTGAESVAEYLDVTLADPDGAPETALELGGLAAALSGALPDGLDVL
                     ALAGLDGDVDSLQQEVTSCSWDLEVRGVTASELARRVELLLDAPSVSVQRERKGRTFD
                     DDLRPSVRSLAVSPSPEDVALEGRTWLRAELATRPRGVRPRELVEVLGADVVLSKARR
                     TQQWIEHDGIRREPLEVDLAHAVIAPHARGRAS"
     gene            complement(758..>2113)
                     /locus_tag="VKX24_12850"
     CDS             complement(758..>2113)
                     /locus_tag="VKX24_12850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLJ09417.1"
                     /translation="LAAIPGVYVPALYEPTEIGGAFGGMRPRTPAAPDQVVKRTVADL
                     AAWPYPRHQLVPLTEVVHDRLNVEVFRGCTRGCRFCQAGMITRPVRERPADQVRSMIR
                     AGLERTGYDEVALTSLSTADFSSIEETVTAVMDGECGDHPVSVSLPSLRVDAFTVATA
                     TEIARARRTGLTFAPEGGTWRMRRVINKLILEDDLYGAVDAAFSNGWRRVKLYFLIGL
                     PTERDEDVLGIAELARRCVEIGRRHHRAPTVVASVGGFVPKAQTPFQWCAQDTAAELR
                     RKVNLLKDACRGVRGLSLRWHDPEATVAEGLASRGDRRMGAVIERVWRAGGTFQEWSE
                     CFEISRWEEALAAEGLSLETVAYRERAEDEALPWDHLSAGLHRDFLWSDWQDALAAVA
                     VEDCRWTPCYDCGACTDAGLEHVVASNVPPAGGSQGTGQDLSAADRVPVRFVGLAAPA
                     R"
BASE COUNT          302 a          778 c          763 g          270 t
ORIGIN      
        1 attgctcacg acgcacgccc ccgggcgtgc ggagcgatga cggcgtgggc caggtcgacc
       61 tcgaggggct cccgacgaat gccgtcatgc tcgatccact gttgcgtcct acgcgctttg
      121 ctcagcacca cgtcggcacc gagcacctcg accagctcac gggggcgcac accccgcggc
      181 cgggtggcca gttcggcccg aagccatgtc cgaccctcga gagcgacatc ctcgggcgac
      241 ggtgacacgg cgagcgaccg gacggagggg cggaggtcgt cgtcgaaggt ccgacccttg
      301 cgctcacgct gcaccgaaac gctcggagcg tcgagcagga gctcgaccct cctcgccagt
      361 tccgatgccg tcacgccgcg cacctccagg tcccaggagc acgatgttac ttcctgctgc
      421 agcgaatcca catcaccgtc cagtcccgca agggcgagca cgtcgagccc gtcgggcagg
      481 gccccggaca gcgcggccgc cagtccgccc agctcaaggg cggtttctgg cgccccatcg
      541 gggtcggcca gggtcacgtc caggtactcg gccacggact ccgcgcccgt cggcagggcg
      601 agcccgaagg cgacgagcgg ccggggggtg aacccctggg agctggccac cgccagaccg
      661 gtgcggcgga gggcccgctc ccacatgcgg gcgacgtcgc ggtggctggt gaaacggacc
      721 ttgcccagct tggcgaagcg gacgcggagc cggtcgctca ccgggccggg gcggccaggc
      781 cgacgaagcg gaccggtacc cggtccgcgg ccgagaggtc ctggccggtg ccctggctgc
      841 cgcccgccgg cgggacgttc gaggccacca cgtgctccag tcccgcgtcg gtgcaggcgc
      901 cgcagtcgta gcagggcgtc cagcggcagt cctcgacggc gaccgccgcc agggcgtcct
      961 gccagtccga ccacaggaag tcgcggtgca gcccggccga gaggtggtcc cagggcaggg
     1021 cctcgtcctc ggcccgctcg cgataggcga cggtctcgag cgacagtccc tcggccgcca
     1081 gggcctcctc ccaccgggag atctcgaagc actccgacca ctcctggaag gtgcccccgg
     1141 cgcgccacac ccgctcgatc accgccccca tccgccggtc ccctcgcgag gccaggccct
     1201 cggcgacggt ggcctcgggg tcgtgccagc gcagcgatag gccccggacc ccccggcacg
     1261 catccttgag gaggttgacc ttgcgccgga gctcggcggc ggtgtcctgg gcgcaccatt
     1321 ggaagggggt ctgggccttc gggacgaagc cgccaaccga ggcgaccacg gtcggggccc
     1381 ggtggtgccg acgaccgatc tcgacgcacc gccgggccag ctcggcgatc ccgagcacgt
     1441 cctcgtcgcg ctcggtcggg aggccgatca agaagtagag cttcaccctt cgccagccgt
     1501 tggagaaggc cgcgtccacc gcgccgtaga ggtcgtcctc caagatgagc ttgttgatga
     1561 cccggcgcat gcgccaggtc ccgccttcgg gggcgaaggt gaggccggtg cgccgggccc
     1621 gcgcgatctc ggtcgcggtg gccacggtga acgcgtcgac ccgcaggctg gggaggctca
     1681 ccgacaccgg gtggtcgccg cactcgccgt ccatcaccgc ggtgaccgtc tcctcgatgg
     1741 aggagaagtc ggcggtcgag agcgaggtga gggcgacctc gtcgtagccg gtgcgttcca
     1801 gcccggcccg gatcatcgag cgcacctggt cggccgggcg ttcgcgcacg ggccgggtga
     1861 tcatgccggc ctggcagaac cggcaccccc gggtgcaccc ccggaacacc tcgacgttga
     1921 ggcggtcgtg gaccacctcg gtcagcggca ccagctggtg gcgggggtag ggccaggcgg
     1981 cgaggtcggc gacggtgcgc ttgaccacct ggtcgggggc ggccggcgtc ctcggccgca
     2041 tccccccgaa ggcccctccg atctcggtcg gctcgtagag cgccggcacg tagacccccg
     2101 ggatcgccgc cag
//
LOCUS       DATGJT010000736         2017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_202791, whole genome shotgun sequence.
ACCESSION   DATGJT010000736 DATGJT010000000
VERSION     DATGJT010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202791"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1419
                     /gene="asnB"
                     /locus_tag="VKX24_12855"
     CDS             <1..1419
                     /gene="asnB"
                     /locus_tag="VKX24_12855"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002613192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HLJ09418.1"
                     /translation="DRMGIKPLYYHPTPGGLLFGSEPKAILAHPGTAAVVDREGFCEL
                     VGFVKTPGTAVYRGMREVRPGEVVEVTRAGTTTRRYWQLEARDHTDDVDTTVRTVREL
                     LEDIVTRQLISDVPLCTLLSGGLDSSAVTALAARALAAEGAGPVRSFAVDFVGYAEHF
                     RPDPVRDTPDRPFVHELAAHVGADHRDIVLATADLIDPAVRRAVLRAADMPNNWGDGY
                     TSLYLLFRAIRGHSTVALSGESADEVFGGYRWFHDPESVNADTFPWLTGPHRSDGFTL
                     LRPDLVRRLDVEGYRREAYRAALAEVPHLDRASAVERRMREICYLHLTRFVQVLLDRK
                     DRMSMASGLEVRVPFCDHRLVQYVFNTPWAMKTFDGREKSLLRAATADVLPPSIVQRR
                     KSPYPATQDPTYEEALHEAVAKLLANDAPVVSLLDREATRAAVNRPVDAVSTDGDRRQ
                     LEFVLGLHGWLEDYDVVLDLAS"
     gene            1583..1834
                     /locus_tag="VKX24_12860"
     CDS             1583..1834
                     /locus_tag="VKX24_12860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09419.1"
                     /translation="MTAALMSAGGTLGLAAAPAGATPSQPTLSAPVAAVASTPVQPLD
                     RDGWRHHGRHGHHHHRRGDDGRHGDHGHRCVGLIVLGCR"
BASE COUNT          279 a          757 c          710 g          271 t
ORIGIN      
        1 gaccgcatgg ggatcaagcc gctctactac caccccaccc cgggcgggct gctcttcggc
       61 tccgagccca aggccatcct ggcccacccc ggcacggccg ccgtcgtgga ccgggagggc
      121 ttctgcgagc tggtcggctt cgtgaagacg ccggggacgg cggtctaccg ggggatgcgg
      181 gaggtccgcc cgggcgaggt cgtcgaggtc acccgggccg ggacgacgac gcggcgctac
      241 tggcagctcg aggcccggga ccacaccgac gacgtcgaca ccacggtgcg caccgtgcgg
      301 gagctgctgg aggacatcgt gacccgccag ctcatctccg acgtcccgct gtgcacgctg
      361 ctgtcgggcg ggctcgactc ctcggcggtg acggccctgg ccgcccgggc gctggccgcc
      421 gagggcgccg gcccggtccg ctccttcgcc gtcgacttcg tcggctacgc cgagcacttc
      481 cggcccgacc cggtgcggga cacgcccgac cggcccttcg tccacgagct ggcggcccac
      541 gtcggcgccg accaccgcga catcgttctg gccacggccg acctcatcga ccccgccgtc
      601 cgccgggcgg tgctgcgggc ggccgacatg cccaacaact ggggcgacgg gtacacgtcg
      661 ctgtacctgc tgttccgggc catccggggc cactcgacgg tggcgctgtc gggcgagtcg
      721 gccgacgagg tcttcggcgg ctaccgctgg ttccacgatc cggagagcgt gaacgccgat
      781 acgttcccct ggctcaccgg cccccaccgc agcgacggct tcacgctcct ccgtcccgac
      841 ctggtgcgcc gcctcgacgt cgagggctac cgccgggagg cctaccgggc ggcgctggcc
      901 gaggtccccc atctcgacag ggcgagcgcg gtggagcggc gcatgcggga gatctgctac
      961 ctgcacctga cccggttcgt gcaggtgctc ctcgaccgga aggaccgcat gagcatggcc
     1021 agcggcctcg aggtccgggt gcccttctgc gaccaccgcc tggtgcagta cgttttcaac
     1081 acgccgtggg ccatgaagac gttcgacggg cgggagaaga gcctcctgcg ggcggcgacg
     1141 gccgacgtcc tgccgccgtc gatcgtgcag cgccgcaaga gcccctaccc cgccacccag
     1201 gacccgactt acgaggaggc cctccacgag gcggtggcca agctgctggc caacgacgcc
     1261 ccggtcgtct ccctgctcga ccgggaggcc acccgggccg cggtgaaccg cccggtggac
     1321 gccgtcagca ccgacggcga ccggcgccag ctggagttcg tgctcgggct gcacggctgg
     1381 ctggaggact acgacgtcgt cctcgacctg gcctcgtgag cgggaccgcc gccgggttcg
     1441 gcgccttcct gagaaggccg ggcccgttcc tgagaagccg cgctgccgga ggcgcgtcgg
     1501 tctgctttga tccgtcaata cgtgccgcaa agcggcacgc cagaaaggga gggccgaaat
     1561 gaagcgatgg atgcttggtc ttttgaccgc cgcgctcatg tccgcgggcg gtaccctcgg
     1621 cctggcggcg gcgccggcgg gcgccactcc aagccagccc acgttgagcg caccggtggc
     1681 ggccgtcgcc tcgacgccgg tccagccgtt ggaccgggac gggtggcgcc accacggccg
     1741 ccacgggcat caccaccacc gtcgcggcga cgatggccgc cacggcgacc acggccaccg
     1801 ctgcgtcggt ctgatcgtcc tcggctgccg ataagcgaca ccggctgccg ggaaatccgc
     1861 agcaaaacgg cccgggcgtc ggctgacgcc cgggccgttc cattcgcccg accaaggcag
     1921 accggcgttc ctgacgaaca ccccctgttc gtcaggaacg ccggtcgtcg gaaccggggc
     1981 gaccccgggc gggtcagcct tcgacggcgg agaggcc
//
LOCUS       DATGJT010000737         2489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_509485, whole genome shotgun sequence.
ACCESSION   DATGJT010000737 DATGJT010000000
VERSION     DATGJT010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509485"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..2154
                     /locus_tag="VKX24_12865"
     CDS             4..2154
                     /locus_tag="VKX24_12865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008259205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HLJ09420.1"
                     /translation="MAISEDHQTLAETVSAFLAKHDALGANRQLLEADSEPLPAFWGE
                     IADLGWLGLHLPEDMGGSGFGFPELVVVVEQFGRAAAPGPAVPTLIVSATLAATGNES
                     IRRKYLPGLADGSVVGAVGLTAELSERDGTWSGSAPAVLGAGPSHIIVLPAGDDVVVF
                     GTASEGVELSTPPNMDPSRRAARVQLSGAAGERIDGGRRLLIDFARLLFAAEATGVAA
                     ECTEIAAAYAKVRNQFGRPIGVFQAVKHHCANMALATELAIGATWDAARAVEAGGEQL
                     SVAAAVAASVAVPAATTNAEMNIQVHGGIGYTWADSAHLYFRRALAISAICSEVEASE
                     EVTDLTRAGVRRTRAVDLPPEAGAIRTEVREFAQRVKALDEDARRSAMLDEGYAMPHW
                     PKPWGRGAQAIEQLVIEEEFEAAGISRPVYPPITAYVTLTLIQQGSDEQISRWVHPML
                     HGELEWCQLFSEPDAGSDAAGIKTRGTKVEGGWVVNGQKVWTSSAHEADFGLATVRTD
                     PEAPKHAGVTMMVVDMHDPGVEIRPLRQLTGSAGFNEVFLTDVFVPDDNVIGMVGGGW
                     TVARATLGNESISVGAGTSVGLPVEQLVESLDAHPERLSGGSARIGRCIASAQANEMV
                     NLRSIYRAVTGSGPGPEAAITKLAFTESMLEGAHALASLAGPDLAYLEDASANSSTTI
                     LGVRVWAIGGGTSEIKRNQIGERILGLPRDPLLA"
     gene            2185..>2489
                     /locus_tag="VKX24_12870"
     CDS             2185..>2489
                     /locus_tag="VKX24_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012643055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HLJ09421.1"
                     /translation="MKAPPFEYHAVSSLEEAVSLLGEYGDEAKVLAGGQSLVPLLALR
                     LARPEHVIDINRVPGLQGIEELAGLRVGPLVRQREAERSPTVAAANPLLAAALPFIG"
BASE COUNT          394 a          870 c          856 g          369 t
ORIGIN      
        1 tccattgcca tctcggaaga ccaccagacg ctggccgaga ccgtcagcgc gttcctggcc
       61 aagcacgacg ccctcggcgc caaccggcaa ctcctcgagg cggactcgga gccgctgccc
      121 gcgttctggg gagagatcgc cgatctcggg tggttgggcc tccacctccc agaggacatg
      181 ggcgggtcgg gcttcggctt ccccgagctc gtcgtcgtcg tggagcagtt cggtcgggcc
      241 gctgcccccg ggcccgcggt gcccaccctg attgtgagcg ccactctggc ggccaccggc
      301 aacgagagca tcaggaggaa gtacctcccc ggcctcgccg acggatcggt cgtcggcgcg
      361 gtgggattga ccgcggagct ctctgagaga gacggcacgt ggagcgggtc ggcgcccgcg
      421 gtcctgggcg cgggtcccag tcacatcatc gtgctcccgg cgggcgacga tgtcgtcgtc
      481 ttcggtacgg catccgaggg ggtggagctg tccacaccgc cgaatatgga cccgtcccgt
      541 cgagcggccc gcgtccagct ctcgggcgca gccggcgagc gcatcgacgg cggacgtcgg
      601 ctcttgatcg acttcgcccg ccttctgttc gcagccgagg ccaccggcgt cgccgcagaa
      661 tgcaccgaaa tcgcggccgc ctacgcaaag gtccgcaacc aattcggtcg gccgatcggg
      721 gtcttccagg cggtcaagca ccattgcgcc aacatggccc tcgccaccga gctcgcgatc
      781 ggtgccacct gggacgcagc ccgggcggtc gaggcgggcg gcgagcagct ctcggtggct
      841 gccgccgtcg ccgcttcggt ggccgttccc gctgccacca ccaacgcgga gatgaacatc
      901 caggtccacg gcgggatcgg ctacacctgg gccgacagcg cccacctgta cttccggcgg
      961 gcgttggcca tctcggccat ctgcagcgaa gtggaagcct ccgaagaagt gaccgacctc
     1021 acccgagccg gggtgcggcg gacgcgggcg gtcgatctgc cgcccgaggc cggggccatc
     1081 cggaccgagg ttcgggagtt cgcgcagcgg gtgaaggccc tcgacgagga cgctcggcga
     1141 tcggcgatgc tcgatgaggg ttatgcgatg ccgcattggc cgaagccgtg gggtcgtggc
     1201 gcccaggcga tcgagcagct cgtgatcgag gaggaattcg aggctgccgg gatcagccgt
     1261 cccgtgtacc cgccgatcac cgcctatgtc accctgaccc tgatccagca gggttccgac
     1321 gagcagatct cccggtgggt ccacccgatg ctccacgggg aactcgagtg gtgccagctc
     1381 ttcagcgagc ccgacgccgg atcggatgcc gcgggcatca agacccgtgg gacgaaggtc
     1441 gagggtggct gggtcgtgaa cgggcagaag gtttggacga gcagcgccca cgaggccgac
     1501 ttcgggctgg ccaccgtccg cacggacccc gaagctccga agcacgccgg ggtcacgatg
     1561 atggtcgtgg acatgcacga tcccggagtc gagatccgcc ccctccgcca actcaccggc
     1621 agcgccggct tcaacgaagt gttcctgacc gatgtgttcg tcccagatga caacgtcatc
     1681 gggatggtcg gcggcggatg gacggtcgct cgagccaccc tcggaaacga aagcatcagc
     1741 gtcggcgctg ggacctcggt gggcttgccc gtcgaacagc tggtcgagtc cctcgatgcc
     1801 catcctgagc gcctctcggg cggcagcgcc cggatcggcc gatgcatcgc cagcgcccag
     1861 gccaacgaga tggtgaacct ccgcagcatc taccgggccg tcacgggcag cggccccggg
     1921 ccggaggcgg cgatcaccaa gttggccttc accgagtcga tgctcgaggg ggcgcatgcc
     1981 cttgcgtcgc tcgccggccc ggacctcgcc tatctcgagg acgcttcggc gaacagctcg
     2041 accacgatcc tcggtgtgcg agtctgggcg atcggcggag gaacctcgga gatcaaacgg
     2101 aaccagatcg gggagcgcat cctcggactg ccgcgcgacc cgctcctcgc ctgacccacc
     2161 cggacccggc gagaaaactc caggatgaag gcgcccccgt tcgagtacca cgcggtgtcc
     2221 tcgctcgaag aggcggtgtc gctcctcggc gagtacgggg acgaggcgaa agtgctcgcg
     2281 ggtggccaga gcctggtgcc actgctggcg ctccgactgg cccgtccgga gcacgtgatc
     2341 gacatcaacc gcgtgcccgg cctccagggg atcgaggaac tcgccggcct ccgggtgggt
     2401 ccgctcgtcc gtcagcgcga agccgagcgg tcaccgaccg tcgccgccgc caacccgctc
     2461 ctcgccgccg cgcttccatt catcggtca
//
LOCUS       DATGJT010000738         2603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_309189, whole genome shotgun sequence.
ACCESSION   DATGJT010000738 DATGJT010000000
VERSION     DATGJT010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309189"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..583
                     /locus_tag="VKX24_12875"
     CDS             <1..583
                     /locus_tag="VKX24_12875"
                     /inference="COORDINATES: protein motif:HMM:NF016047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell wall-binding repeat-containing protein"
                     /protein_id="HLJ09422.1"
                     /translation="GFTTQRLAGNDEYGTAVLIAQQLGNPATVFEATGLDFPDALSAV
                     PAAVAVHGAILLTDGSTQDPETAAYLAAHPNDTRYAIGGQFAAAGADPGATAVFGETQ
                     YDTSAAVAFKFFGAPSSVGAATGADFPDALSAGPGLGRAGAPMLLVPPLGPLPGSVVF
                     YLGLVGGGVRSGTLFGGVFAVSDQVMAELDGAL"
     gene            complement(596..2311)
                     /locus_tag="VKX24_12880"
     CDS             complement(596..2311)
                     /locus_tag="VKX24_12880"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HLJ09423.1"
                     /translation="MTYRFSYDEASPYAHAVRLIGAHRRPEGRVVVDLGCGYGPIAEP
                     LRSLGLDYVGVDSDRPGIEDLVARGFEGHVGDIASPGPLADQLSGVLAGRPVAAVCLL
                     DALEHLADPDALLRSLAGMTGGATLVVSIPNVTHLDLGVKLLLGRWDVTETGLLDATH
                     LRFFSEAGLEETMARCGWSEVGRADFELVLSDQHFPEDSVALDRATPVGSLLTWLRTS
                     AGPAALVNQFVRAYAPGERTVDSAAEESERPFLSVLVRTQGTRPGTLEDTLLSLAAQT
                     CADFEVLVLAHDAAPSALAGVEAAVAAFDPSFADRVRVVPVGGGGRARPLNEGARVAR
                     GHHLATLDDDDLAFAHWVETLKAAAGRAPGRVLHTGVAAQSIAEEDRAPGYRVAGPPH
                     CPYPVAFEQLDHMVDNRTPNCGFAVPRSLVADLGQAWDDTLPVYEDWEYLLRATALCG
                     VEDTGVVGALARVWERGERSTTAHDEAAWDDARVGVVARLDARPFLLAPGSVSKLRRL
                     VAAADAGGGDWQAGVSESSHHATLAELAAARGELAALRASTSWRLTAPVRALADRLRR
                     AGRRR"
     gene            complement(2308..>2603)
                     /locus_tag="VKX24_12885"
     CDS             complement(2308..>2603)
                     /locus_tag="VKX24_12885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLJ09424.1"
                     /translation="HDKRMNAYGQMEIGPAEMRWSAEASVLLASRYGRPDLAVARLEA
                     MAEADDPALRARAGELQRRLDAGELPAPLPGAERVAQFVGGEFAVHRFGYAGP"
BASE COUNT          317 a          978 c         1014 g          294 t
ORIGIN      
        1 gggcttcacg acccagcggt tggccgggaa cgacgagtac ggcacggcgg tgctcatcgc
       61 ccagcagctc gggaacccgg cgaccgtctt cgaggcgacg gggctcgact tccccgacgc
      121 gttgagcgcc gtgcccgccg ctgtcgccgt ccacggcgcg atcctgctca ccgacgggtc
      181 cacccaggac cccgagaccg ccgcctacct cgccgcgcac ccgaacgaca cccgctacgc
      241 gatcgggggc cagttcgcgg cggccggcgc cgaccccggc gccaccgccg tcttcggcga
      301 gacccagtac gacacctcgg ccgccgtcgc cttcaagttc ttcggcgcgc cgtcctcggt
      361 cggggcggcc accggtgccg acttccccga cgccctgtcc gccgggcccg gcctcgggcg
      421 ggccggcgcc ccgatgctcc tcgtcccgcc cctcggcccg ctgcccgggt ccgtggtctt
      481 ctacctcggg ctggtcggcg ggggcgtccg gtcgggcacc ctcttcgggg gggtcttcgc
      541 cgtcagcgac caggtgatgg ccgagctcga cggcgcgctc tagcgcccgc cgccctcaac
      601 gccggcggcc ggcacggcgc aaccggtcgg cgagcgcccg gaccggggcg gtcaggcgcc
      661 agctggtcga ggcgcgcaac gcggccagct cgccgcgggc ggcggccagc tcggccagcg
      721 tcgcgtggtg cgagctctcg ctgaccccgg cctgccagtc cccgccgccg gcgtcggcgg
      781 cggccaccag ccggcgcagc ttggagaccg agcccggggc gagcaggaag ggccgggcgt
      841 cgaggcgcgc caccaccccc acccgggcgt cgtcccaggc ggcctcgtcg tgggccgtcg
      901 tcgagcgctc gccgcgctcc cagacccggg ccagggcgcc gacgaccccg gtgtcctcca
      961 cgccgcacag cgccgtcgcc cgcagcaggt actcccagtc ctcgtagacg gggagggtgt
     1021 cgtcccaggc ctggccgagg tcggccacga gggagcgggg gacggcgaac ccgcagttgg
     1081 gggtgcggtt gtcgaccatg tggtcgagct gctcgaaggc caccgggtac gggcagtggg
     1141 gcgggccggc cacccggtag cccggggccc ggtcctcctc ggcgatcgac tgggcggcca
     1201 cgccggtgtg cagcacccgg cccggcgccc gtccggccgc cgccttgagg gtctcgaccc
     1261 agtgggcgaa ggcgaggtcg tcgtcgtcga gggtggccag gtggtggccc ctcgccaccc
     1321 gggccccctc gttgagcggc cgggcccggc cgccgccgcc gacgggcacc acccggaccc
     1381 ggtcggcgaa ggaggggtcg aacgcggcga ccgcggcctc gacgccggcg agggccgacg
     1441 gcgccgcgtc gtgggcgagg acgagcacct cgaagtcggc gcaggtctgg gcggcgaggg
     1501 agagcagggt gtcctcgagg gtgcccgggc gggtgccctg ggtgcggacc agcaccgaga
     1561 ggaagggccg ctcggactcc tccgccgcgc tgtccacggt ccgctcgccg ggcgcgtagg
     1621 cgcggacgaa ctggttgacg agggccgccg gaccggcgct ggtgcgcagc caggtgagca
     1681 gcgagccgac cggcgtcgcc cggtcgaggg ccaccgagtc ctccgggaag tgctggtcgg
     1741 agaggacgag ctcgaagtcg gcccggccga cctcggacca gccgcaccgg gccatggtct
     1801 cctccaggcc ggcctcggag aagaagcgga ggtgggtggc gtcgagcagg ccggtctcgg
     1861 tcacgtccca gcgcccgagg agcagcttca ccccgaggtc gaggtgggtg acgttcggga
     1921 tgctgacgac gagggtcgcc cctcccgtca tcccggcgag cgaccggagc agggcgtcgg
     1981 ggtcggccag gtgctcgagc gcgtcgagga ggcagaccgc cgccaccggc cggccggcca
     2041 ggaccccgga gagctggtcg gcgaggggtc ccggcgaggc gatgtcgccg acgtggccct
     2101 cgaagccccg ggccacgagg tcctcgatcc cggggcggtc gctgtcgacg ccgacgtagt
     2161 cgaggcccaa cgaccgcagc ggctcggcga tcgggccgta gccgcagccg aggtcgacca
     2221 cgacccggcc ctccggccgg cggtgggccc cgatgaggcg caccgcgtgg gcgtagggcg
     2281 aggcctcgtc gtaggagaag cggtaggtca cgggcccgcg tagccgaagc ggtggacggc
     2341 gaactcgccg ccgacgaact gcgcgacccg ctcggcgccg gggagcggcg cagggagctc
     2401 tccggcgtcg aggcggcgtt ggagctcgcc ggcccgcgcc cgcagggcgg ggtcatcagc
     2461 ctccgccatc gcctcgaggc gggccacggc caggtcggga cggccgtagc gggaggcgag
     2521 cagcaccgag gcctctgccg accaccgcat ctcggccggc ccgatctcca tctggccgta
     2581 ggcgttcatc cgcttgtcgt gga
//
LOCUS       DATGJT010000739         2064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_100086, whole genome shotgun sequence.
ACCESSION   DATGJT010000739 DATGJT010000000
VERSION     DATGJT010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100086"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..332)
                     /locus_tag="VKX24_12890"
     CDS             complement(147..332)
                     /locus_tag="VKX24_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HLJ09425.1"
                     /translation="MDLFVLKTWLEAKFHADDETGASMVEYGLLLALIAVIAIVAVRA
                     LGSSVSTKFSSVTSSLN"
     gene            complement(597..1247)
                     /locus_tag="VKX24_12895"
     CDS             complement(597..1247)
                     /locus_tag="VKX24_12895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLJ09426.1"
                     /translation="MNPRLLLVDDHKLLRQGLRRAVEDAGFDVVGEAGDGEEAVRLAV
                     ECRPDVVLMDLSMPVMDGIEATARLRHSIPEARVVILTMHGEEDTVARALRAGAVAYL
                     LKDCSIDEVAATLRSVAAGDTDLSADLARTLLAELPGPLDPAPTAAPASSLSQREVEV
                     LQMFADGCSTVEVGQRLYISAKTVKNHLASIYEKLDARDRTQAVLTAVRMGIIRLD"
     gene            complement(1244..>2064)
                     /locus_tag="VKX24_12900"
     CDS             complement(1244..>2064)
                     /locus_tag="VKX24_12900"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLJ09427.1"
                     /translation="LGLWPDSRCGIYAPLVARDHLVALVALERDRDAGFDGRDADVLS
                     GLAEPLALAIDNGLWFDRLRRLGAEGERDRLARDLHDRFAQGLAYVNLELDRLARHPA
                     PGPQLVELRRQVGGLLGEVRETLRQLRSRVGPSAGLGDLLAAELPRFAERTGVAIRGP
                     AERCAVRLPVAVEQELWRITQEALDNVERHSKATSLEVTWGCDGRHGRLVVADDGAGF
                     DPGGHITGGAGGGSGMTAMRERANAIGARLLVDSHPGSGTWIQVDVDTGKEPAA"
BASE COUNT          277 a          738 c          767 g          282 t
ORIGIN      
        1 gggtgcccag gcgggcctgc agccaggcga acaaggcgag gatgctcatc gggatgcttc
       61 cttccgtgga ccgttcccaa aagccgagga gccggcgccg gggtgacccg gcaccggctc
      121 cttgatcggc aaatggccga aggtcgttag ttcagcgagc tggtgaccga ggagaacttc
      181 gtcgagacgc tggagcccag ggcccgcacg gccacgatgg cgatgacggc gatgagggcg
      241 aggagcaggc cgtactcgac catgctggca ccggtctcgt cgtcggcgtg gaacttggcc
      301 tcgagccagg tcttcagaac gaaaaggtcc atgtgaatct ttctcctctt gtcggggcct
      361 ccgcctccgt tgatagaggt atcggtcgcc ggggggcccg acttcatagg ccgatcgact
      421 catcctgcgg ggcgggagcc ttccggcgat cgtggtgcgc ctccgacgga cgccgacggc
      481 cggccccgcc cgggtaccgc gaccggtggc gctcgaccgg cgtcgacggc cgtggacgcc
      541 tggcgtaccg cgaccggtcg caccccccgg tgcccgttcc ccggcggcgg cgggtgtcag
      601 tcgaggcgga tgattcccat ccggacggcg gtgaggacgg cctgcgtccg gtcgcgggcg
      661 tcgagcttct cgtagatcga ggccaggtgg ttcttcaccg tcttggcgct gatgtagagc
      721 cgctggccca cctcgacggt ggagcagccg tcggcgaaca tctgcaggac ctcgacctcc
      781 cgctggctga gcgaggatgc cggcgcggcc gtcggagcag gatccagcgg cccggggagt
      841 tcggccagca gcgttctcgc caggtcggcc gagaggtcgg tgtcgccggc ggccaccgac
      901 cgcagggtcg ccgccacctc gtcgatcgag cagtccttca ggaggtaggc gacggcgccg
      961 gcccgcaggg cccgggccac cgtgtcctcc tcgccgtgca tcgtgaggat caccacccgg
     1021 gcctcgggga tggagtggcg cagccgggcg gtggcctcga tcccgtccat caccggcatc
     1081 gagaggtcca tcagtacgac gtccggccgg cactcgacgg ccaggcggac ggcctcctcg
     1141 ccgtcacccg cttcgccgac gacgtcgaac ccggcgtcct ccaccgcccg gcgcaaaccc
     1201 tggcggagca gcttgtggtc gtcgacgagg aggaggcggg ggttcacgcc gccggttcct
     1261 tgcccgtatc gacgtcgacc tggatccacg tcccgctgcc gggatgggag tcgacgagca
     1321 gccgggcgcc gatggcgttg gcccgttccc gcatggccgt catcccggag ccgccgccgg
     1381 caccgccggt gatgtgcccg ccggggtcga acccggcgcc gtcgtcggcc accaccagcc
     1441 ggccgtggcg gccgtcgcag ccccaggtga cttccagcga cgtcgccttg gagtgccgct
     1501 cgacgttgtc gagcgcctcc tgggtgatgc gccacagctc ctgctccacc gccaccggca
     1561 ggcggacggc gcagcgttcc gccgggcccc ggatggcgac gccggtgcgt tcggcgaagc
     1621 gcggcagctc ggcggccagc aggtcgccca gccccgccga cgggccgacc cgggagcgga
     1681 gctggcgcag ggtctcccgc acctcgccga ggaggccgcc gacctgccgg cggagctcga
     1741 cgagctgcgg gcccggcgcc ggatggcggg cgagccggtc gagctccagg ttcacgtagg
     1801 ccaggccctg ggcgaaacgg tcgtggaggt cgcgggccag ccggtcccgt tccccctcgg
     1861 cgccgaggcg gcggaggcgg tcgaaccaca ggccgttgtc gatggccagc gccagcggct
     1921 cggccagccc ggagaggacg tcggcgtccc gcccgtcgaa gccggcgtcg cggtcccgct
     1981 ccagcgccac cagggccacg aggtggtcgc gggccacgag gggggcgtag atgccgcacc
     2041 ggctgtcggg ccacagcccg agcc
//
LOCUS       DATGJT010000740         2133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_203706, whole genome shotgun sequence.
ACCESSION   DATGJT010000740 DATGJT010000000
VERSION     DATGJT010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203706"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..1111
                     /gene="plsX"
                     /locus_tag="VKX24_12905"
     CDS             65..1111
                     /gene="plsX"
                     /locus_tag="VKX24_12905"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013175463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HLJ09428.1"
                     /translation="MASARVRRPGGPEDQGLPVAVDAMGGDKAPGEIVAGAVQAASEL
                     QVPVVLVGRSADLGDTGGLEVVEASEVVAMDEDPASAVRRKKDSSLVRAAEAVRDGRA
                     LAMVSAGNTGAAMASALLRMGRLPGVTRPAIATPIPRPGTSPTVLLDAGANTECTAAM
                     LVQFAQMGATYASARYGPADPSVALLSIGEEPTKGTPLVKEAHAAIEEAAASGAFRFV
                     GNVEGRDLLPGTADVVVTDGFTGNVALKTLEGALRFFMDALAGILGHDDSTRAAADAL
                     LPYLAPLAAEFDPDNTGGAMLLGVDGVCVISHGSSSARAVVSAVRVAHDLAEAGLVGR
                     LAEVTASRGGAPSR"
     gene            1145..1441
                     /locus_tag="VKX24_12910"
     CDS             1145..1441
                     /locus_tag="VKX24_12910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HLJ09429.1"
                     /translation="MPAETHVEKGPLDRRQVFELIQEQLADILEIEPSAISESSSFAE
                     DLDADSLALIELVEALEEELGERTVGFRIEDEDLEDLRTVRDAVDYVVAKLGAA"
     gene            1524..>2133
                     /gene="rnc"
                     /locus_tag="VKX24_12915"
     CDS             1524..>2133
                     /gene="rnc"
                     /locus_tag="VKX24_12915"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HLJ09430.1"
                     /translation="MGRLGFEFDDPGLLDQALSHRSWCAEAGGMPSNERLEFLWDAVL
                     GLVVAEHCYRSYPELPEGSLAKVRAAVVNTNVLAEVAGELDLGRAVRLGRGEDASGGR
                     EKASILANSVEAVIGAVYLDQGWDAAASLVLRLLGRRIADAAAGPGAEDFKTRLQELV
                     IRRAGELPRYEVDGAGPDHARRYTASVFVSGAAAGSGEGRSKK"
BASE COUNT          278 a          778 c          781 g          296 t
ORIGIN      
        1 tgccccacgt cgtgtgcccc aactgcgggt ggtacaaggg ccggcaggcc gtagagatcg
       61 actagtggcc tccgcccggg tgcgccgccc aggcggcccg gaggaccagg gcctccccgt
      121 tgccgtcgac gccatgggag gggacaaggc tcccggggag atcgtggccg gggccgtgca
      181 ggcggcgtcg gagctccaag tccccgtggt cctcgtcggc cgctccgccg atctcggtga
      241 cacggggggg ctggaggtcg tcgaggccag cgaagtggtg gccatggacg aagaccccgc
      301 gtcggcggtg cggaggaaga aggactcctc tctggtccgc gccgccgagg ccgtccgtga
      361 cggacgggcc ctcgccatgg tgagcgccgg caacaccggt gccgccatgg ccagcgcgct
      421 gctgcgcatg ggccggctcc ccggtgtgac gcggccggcc atcgccactc cgatcccccg
      481 accggggacg tctcccaccg tcctcctcga cgccggtgcc aataccgagt gcacggcggc
      541 catgctcgtg cagttcgcgc agatgggcgc cacctacgcc tcggcgcgct acggacccgc
      601 cgacccctcg gtggccctgc tttcgatcgg cgaggagccg accaagggga cgccgctcgt
      661 caaagaggcc cacgccgcca tcgaggaggc ggccgcctcc ggcgcgttcc gtttcgtcgg
      721 caacgtcgaa ggccgggacc tgctccctgg cacggccgac gtcgtggtga ccgacggctt
      781 caccggcaac gtggcgctca agacgctcga gggcgccctg cgcttcttca tggacgcgct
      841 ggccgggatc ctggggcacg acgactccac ccgcgccgcc gccgatgccc tgctcccgta
      901 cctggccccc ctcgccgccg agttcgaccc cgacaacacg gggggcgcca tgctcctcgg
      961 cgtcgacggg gtctgcgtga tcagccacgg ctcttcgtcc gcccgggccg tcgtctcggc
     1021 ggtgagggtg gcccacgacc tggccgaggc gggcctcgtg ggccgtctgg cggaggtcac
     1081 ggcctcccgt gggggggcac cctccaggta gaatccggcc ccgaagccga gcgcaggaga
     1141 cgacgtgccc gccgagaccc atgtggagaa gggtcccctc gaccgccgcc aggtgttcga
     1201 gctgatccag gagcaactgg ccgacatcct cgagatcgag ccttcggcga tcagcgagtc
     1261 gtcgtcgttc gccgaggacc tcgacgccga ctcgttggcc ttgatcgagc tggtcgaggc
     1321 gctcgaggag gagctcggcg aacgtaccgt ggggttccgg atcgaggacg aggacctcga
     1381 ggacctgcgg acggtccgtg acgccgtcga ctacgtcgtc gccaagctcg gggcggcctg
     1441 acacggccct cgaccccgca ggttcgcgtg agcccgccgg cgccgtcggc ggcggcccgg
     1501 aggctccttc cgacgagcag ctcgtgggcc gcctcggctt cgagttcgac gacccgggcc
     1561 tgctcgacca ggccctgtcg caccggtcgt ggtgcgcgga ggcgggcggc atgccctcaa
     1621 acgagcgcct ggagttcctc tgggacgccg tgctcgggct cgtcgtggcc gagcattgct
     1681 accggtccta tcccgagctt cccgaaggct cgctggccaa ggtccgggcc gccgtggtca
     1741 acaccaacgt gctcgccgag gtggccgggg agctcgacct cggtcgtgcc gtgcggctcg
     1801 gccggggcga ggacgcctcg ggcgggcgcg agaaggcctc catcctcgcc aactcggtgg
     1861 aggccgtcat cggcgccgtc tacctggacc agggctggga cgcggccgct tcgctggtgc
     1921 tgcgcctcct cggccggcgt atcgccgacg ccgccgccgg ccccggggcg gaggacttca
     1981 agacccgcct ccaggagctc gtcatccgcc gggccggcga gctgccccgc tacgaggtcg
     2041 acggggccgg cccggaccac gcccggcgct acacggcttc ggtgttcgtg agcggcgccg
     2101 ccgccgggag cggcgaggga aggtcgaaga agg
//
LOCUS       DATGJT010000741         2598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_309791, whole genome shotgun sequence.
ACCESSION   DATGJT010000741 DATGJT010000000
VERSION     DATGJT010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309791"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VKX24_12920"
     CDS             <1..541
                     /locus_tag="VKX24_12920"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440627.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The beta chain is a
                     regulatory subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HLJ09431.1"
                     /translation="TRGRSITSLQAVYVPADDYTDPAPFTTFTHLDATTELSRQIASL
                     GIYPAVDPLASTSNILTPEVVGERHYAVARSVQSVLQRYRELQDIIAILGLDELSEDD
                     RLTVNRARKIQRFLSQPFNVGEAFTGLKGVTVPIQETVESFEALINGELDDVPEQAFL
                     NVGGAESVLAKAKTLQGAE"
     gene            554..997
                     /gene="atpC"
                     /locus_tag="VKX24_12925"
     CDS             554..997
                     /gene="atpC"
                     /locus_tag="VKX24_12925"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HLJ09432.1"
                     /translation="MTTFAASLVTPERVVLETEVQAVMLRTEEGEAAFLPGHADLIGA
                     LVPGLVRFQHEDGSEERAAVHGGFVQVDGKHVVVLAPVAELAEEIDVDRARRALEEAQ
                     QRLAELGTPSGGGAEEGAGPEDRARTEAQDSRRRAEVRLEVTGQS"
     gene            1124..1750
                     /locus_tag="VKX24_12930"
     CDS             1124..1750
                     /locus_tag="VKX24_12930"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLJ09433.1"
                     /translation="MVDIEGVRSRKRDWTRGEILAAAWDLVRSDGIAALSMRDLAARV
                     GMRAPSLYTYFPSKNDLFDAMYADGMRQMDAIVGSSPRGGSPFETLRNRVRAFVTGAV
                     EDPVRFQLLFERPIPGFAPTAESLAIGLNRMQETRSMAEAAGLDGQRQLDLLMATSRG
                     LVAMQIANEPGGDRWVGLIDEAVEILVSHYTSTRAKSASRRGGPARKS"
     gene            1940..>2598
                     /locus_tag="VKX24_12935"
     CDS             1940..>2598
                     /locus_tag="VKX24_12935"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLJ09434.1"
                     /translation="MVEKLARHGRVIAYDRRGYARTGGEPVTSIAGHTQDAAALLDKL
                     ADRPAVVVGTSVGATIAIDLARLRPDLVQAVVAHESPWHVTRQPPTRREIAALGKMAW
                     LSRRHRYPEAAAAFLRFAYGYRDGGTAWERFPDAWRQVAGENAQAGLSDIRIAIGDYP
                     TTEQLASVSRPVLCTCGSRSPSKMVRVTRKLAKTVPTGSFLQIEGAGHAAPFDAPDNF
                     VA"
BASE COUNT          447 a          886 c          872 g          393 t
ORIGIN      
        1 gacacggggc cggtcgatca cttcgctgca ggccgtgtac gtccctgccg acgactacac
       61 cgacccggcg ccgttcacca cgttcaccca cctcgacgcc accaccgagc tctcgcgcca
      121 gatcgcctcg ctcggcatct acccggcggt ggacccgctg gcctcgacgt cgaacatcct
      181 cacccccgag gtggtcggcg agcggcacta cgccgtggcc agaagcgtcc agagcgtgct
      241 gcagcgctac cgcgagctgc aggacatcat cgccatcctc gggctcgacg agctgtcgga
      301 ggacgaccgc ctcaccgtga accgggcccg gaagatccag cggttcctgt cccagccctt
      361 caacgtcggc gaggcgttca ccgggctcaa gggagtcacc gttcccattc aggagacggt
      421 ggagtcgttc gaggcgctca tcaacggcga gctcgacgat gtgcccgagc aggccttctt
      481 gaacgtcggg ggcgccgagt cggtcctcgc caaggccaag accctgcagg gcgccgagta
      541 gcgcgagccg gtagtgacca ccttcgccgc cagcctcgtc acccccgagc gcgtcgtcct
      601 cgagaccgag gtgcaagccg tgatgctgcg caccgaggag ggggaggccg ccttcctccc
      661 cggccacgcc gatctcatag gcgcgctcgt gccggggctc gtgcgtttcc aacacgagga
      721 cggcagcgag gagcgcgctg ccgtccacgg gggcttcgtg caggtcgacg ggaagcacgt
      781 ggtggtgctc gcccccgtcg ccgagctggc cgaggagatc gacgtcgacc gggcccggcg
      841 cgccctcgag gaagcccagc agcgcctggc ggagctgggc acgccaagcg gcggcggtgc
      901 cgaggaaggc gccggtcccg aggaccgcgc ccgcaccgag gcacaggact cacgtcggcg
      961 cgccgaggtg cgcctcgagg tgaccggcca gagctgagcc ggccgcgagc ggcgagctcc
     1021 gctccgccct tcccctagct cctagcgcgg cgccgtggct ctccccttga cccggggctc
     1081 gaacgtcgtt agggtaaaca tactgtgata ggatattcgg acaatggtag acatcgaagg
     1141 cgtccgaagc cggaagcggg attggacccg aggcgagatc ttggccgcgg catgggatct
     1201 cgtccgatcg gatggcatcg ctgcgctctc gatgcgcgac ctggcggcca gggtcggtat
     1261 gcgggcaccg tcgctctaca cctatttccc gtccaagaac gacctgttcg acgccatgta
     1321 cgcggatggg atgcggcaga tggacgccat cgtgggaagc agcccgcgag gtggcagtcc
     1381 gttcgagacc cttcgcaacc gtgtcagggc gttcgtcacc ggcgcggtcg aagatcccgt
     1441 tcgattccag ctgctcttcg agcggccgat accggggttc gcacctaccg cagaatcact
     1501 cgccatcgga ctgaaccgca tgcaagagac ccgcagcatg gcggaggccg ccggcctcga
     1561 tggtcagcga cagctggatc tgctcatggc gaccagtcga ggtcttgtcg ccatgcagat
     1621 cgccaacgaa ccgggcggcg atcgctgggt ggggttgatc gacgaagccg tggagatctt
     1681 ggtgagccac tacacctcca cccgagccaa gtctgcgtct cgacgaggcg ggcctgctcg
     1741 aaagagctga ccttgtgaga tgcccgcgtc ctgagagtcg ctggggtgct ctgcctacca
     1801 ctgcaatacg tagagagaag gattcgacat gtcgtcagtt acgaacacgg acggtgatgt
     1861 ccactgcgag gagatcgggc agggaacgcc gatcctcctg atccacccgg cgggggccac
     1921 ggcgtccacc tgggggacgg tggtcgagaa gctcgctcgc cacggtcgcg tcatcgccta
     1981 tgaccgccgc ggctatgccc gcaccggagg cgaaccggtg acctcgatcg ccggccatac
     2041 gcaggacgcc gcggcgttgc tcgacaagtt ggcggaccga ccagcagtgg tcgtcggaac
     2101 gagcgtcggc gccacgatcg ccatcgatct ggcgcgtctt cggcccgacc tggtccaagc
     2161 ggtggtcgcc cacgagtcgc catggcacgt gaccaggcaa ccaccgacgc ggcgggaaat
     2221 cgccgcgctc ggaaagatgg cgtggctgtc cagacgacac cggtatcccg aagcagccgc
     2281 cgctttcttg cggttcgcgt acgggtatcg cgacggtggc accgcctggg agcggtttcc
     2341 cgacgcgtgg cggcaggtcg ccggcgagaa tgcacaggcc ggtctgtcgg acatccgaat
     2401 cgccatcggc gactacccga ccaccgagca attggccagc gtcagccgac cggtgctgtg
     2461 cacctgcggc agccggagtc cctcgaagat ggtccgagtg acccgcaagc tggccaagac
     2521 cgttccgaca ggatccttcc tgcagatcga aggagcagga cacgccgccc ccttcgacgc
     2581 gccggacaac ttcgtggc
//
LOCUS       DATGJT010000742         3012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_309799, whole genome shotgun sequence.
ACCESSION   DATGJT010000742 DATGJT010000000
VERSION     DATGJT010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309799"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1624
                     /gene="typA"
                     /locus_tag="VKX24_12940"
     CDS             <1..1624
                     /gene="typA"
                     /locus_tag="VKX24_12940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013421905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HLJ09435.1"
                     /translation="TKINIVDTPGHADFGGEVERALTMVDGVLLLVDASEGPLPQTRF
                     VLRKALELKLPIVLVVNKIDRSDARPAEVVNEVYELFLDLDADHDQIDFPIVYANARA
                     GWASLDPAVPGETLEPLFRLLVERIPAPTYEEGHPLQALVTNLDRSPYLGRLAMCRVR
                     QGTISRSQPVAWCKADGSIERVKVTDLFVTEALSRVPAESAGPGEIIAVAGLDEVTIG
                     ETLADAADPRPLPVLHIDEPSLSMTIGVNTSPLAGQGGGTKLTARLVKGRLDTELVGN
                     VSLRVFPTARPDTWEVQGRGELQLAVLVETMRREGFELTVGKPQVVTREIDGKLCEPV
                     ERMTVFVPEDYLGAVSKLLAARKGRVEQLVNHGHGWVRIEYLVPARGLIGFRTEFMTE
                     TRGTGILHHVFERYEPWFGEIRTRTSGSMVADRRGQSTTYALLNLSERGDMLVGPGAD
                     VYEGMIVGENARAEDMDVNVAKERKLTNMRSSTAEELVRLPPPRNLSLEQALEFIAED
                     ECVEVTPKVVRLRKAVLPAAERARAQKRDRPA"
     gene            1740..2999
                     /locus_tag="VKX24_12945"
     CDS             1740..2999
                     /locus_tag="VKX24_12945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014694559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ09436.1"
                     /translation="MKRPFRTGLVAGLLALTLAGAACSSGSNSAAPKPAVSGGAVSAA
                     AGTAPDASPAPETAAPAPVSSTTAPAPAKPTATTAKPTPTTAKPATKPAPTTTTTAKP
                     AEHVTLRLGYFPNVTHAAAIAGVEKGIFADKLGPNVTLQTSIFNAGSAATEALFSGAI
                     DATYIGPSPTINGWVKSKGAALRIIAGATSGGASLVVKPTINSAADLKGQKIATPQLG
                     NTQDVAARAWLLTQGLKTDTQGGGDVHIVPQDNAQTLTAFESGAIAGAWVPEPWATRL
                     VQEGGGKVLVDERSLWPAGQFVTTELIVSTSFLSAHPDVVERLLEGHIAATDWINQNP
                     AEAQDVVNGGIAKVTGQAMNPATVVASWSQMAFTFDPLAATMSKEASNAQSVGLLPGT
                     VNLDGIYDLSILNRLLSAAGRPTVSDH"
BASE COUNT          491 a         1102 c         1031 g          388 t
ORIGIN      
        1 cacgaagatc aacatcgtcg acacgccggg ccatgcggac ttcggcggcg aagtcgagcg
       61 cgcgctgacg atggtcgacg gcgtgctgct cctcgtcgac gcctcggaag ggccgctgcc
      121 gcagacgcgg ttcgtgctgc gcaaggcgct cgagctcaag cttccgatcg tgctcgtggt
      181 caacaagatc gaccgcagcg acgcgcgtcc ggccgaggtg gtcaacgagg tctacgagct
      241 gttcctcgac ctcgacgccg accacgacca gatcgacttc ccgatcgtct acgccaacgc
      301 ccgggccggc tgggcgtccc tcgatcctgc ggtccccggc gaaacgctcg agccgctctt
      361 ccgtttgctg gtcgagcgga tcccggcgcc cacctacgag gaggggcacc cgctccaggc
      421 gctggtcacg aacctcgacc gctcgcccta cctgggccgg ctggcgatgt gccgggtccg
      481 ccagggcacg atcagccgca gccagccggt ggcctggtgc aaggcggacg ggtcgatcga
      541 gcgggtcaag gtcaccgacc tgttcgtcac ggaggccctg tcccgggtcc cggccgagtc
      601 ggccggtccc ggcgagatca tcgccgtggc cggcctcgac gaggtcacga tcggcgagac
      661 gctggccgac gccgccgacc cgcggccgct gcccgtcctg cacatcgacg agccgagcct
      721 gtcgatgacc atcggcgtca acacgtcgcc gctggccggc cagggcggcg gcaccaagct
      781 caccgcccgg ctcgtgaagg gccggctcga caccgagctg gtcggcaacg tgtcgctgcg
      841 ggtcttcccc acggcccggc cggacacctg ggaggtccag ggccggggcg agctgcagct
      901 ggccgtcctg gtcgagacga tgcgacggga gggcttcgag ctcacggtcg gcaagcccca
      961 ggtcgtcacc agggagatcg acggaaagct ctgcgaaccg gtcgagcgca tgacggtgtt
     1021 cgtccccgag gactacctcg gcgccgtgag caagctcctc gccgcccgga agggccgggt
     1081 ggagcagctc gtcaaccatg gccacggctg ggtccgcatc gagtacctgg tgcccgcccg
     1141 ggggctcatc gggttccgga cggagttcat gaccgagacc cgggggacgg gcatcctcca
     1201 ccacgtgttc gagcgctacg agccctggtt cggcgagatc cgcacccgca ccagcgggtc
     1261 gatggtcgcc gatcgccggg gccagagcac gacctacgcc ctgctcaacc tgtcggagcg
     1321 gggcgacatg ctggtcgggc ccggagccga cgtctacgag gggatgatcg tgggcgagaa
     1381 cgcccgggcc gaggacatgg acgtcaacgt ggccaaggag cgcaagctca ccaacatgcg
     1441 gtcgtcgacc gccgaggagc tcgtgcggct cccgccgccc cggaacctgt cgttggagca
     1501 ggcgctggag ttcatcgccg aggacgagtg cgtcgaggtg accccgaagg tcgtgcggct
     1561 ccgcaaggcg gtcctcccgg ccgccgagcg ggcccgggcc cagaagcggg accgcccggc
     1621 atagcggcgc cgagggctaa atttccgcac actcccgcag gagtctggct ggcgccgtcc
     1681 aatctctagt gagtccgcta agtcaatcaa cttactagag atcagctgga ggcaccacag
     1741 tgaaacgtcc gttccgcacc ggcctggtgg ccggcctgct tgcactcacc ctggccggtg
     1801 cggcgtgcag ctcggggtcg aactccgccg cgccgaagcc ggcggtcagc ggcggcgccg
     1861 tgagcgccgc ggccgggacc gcacccgacg cctcgccggc gcccgagacc gcggccccgg
     1921 cgccggtgag ctcgaccacc gccccggcac cggcgaagcc caccgccacc acggccaagc
     1981 cgacgccgac gacggccaag ccggccacga agccggcacc gaccacgacg acgacggcca
     2041 agccggccga gcacgtgacc ctccgcctcg gctacttccc caacgtcacg cacgccgccg
     2101 ccatcgccgg cgtcgagaag gggatcttcg ccgacaagct cggcccgaac gtgacgctcc
     2161 agacgtcgat cttcaacgcc ggcagcgccg ccaccgaggc gctgttctcg ggcgcgatcg
     2221 acgccaccta catcggtccg agccccacga tcaacggctg ggtgaagtcg aagggcgccg
     2281 cgctgcggat catcgccggg gccacctcgg gcggcgcgtc gctcgtggtc aagcccacca
     2341 tcaacagcgc cgcggacctc aagggccaga agatcgccac gccgcagctc ggcaacacgc
     2401 aggacgtcgc cgcccgggcc tggctgctca cgcagggcct gaagaccgac acgcaaggcg
     2461 gcggcgacgt ccacatcgtc ccgcaggaca acgcccagac gctgacggcc ttcgagtccg
     2521 gcgccatcgc cggcgcctgg gtccccgagc cctgggccac ccggctggtg caggaaggcg
     2581 gcggcaaggt cctcgtcgac gagcgcagcc tgtggcccgc cgggcagttc gtgaccacgg
     2641 agctcatcgt gagcacgtcg ttcctgtccg cccaccccga cgtggtcgag cggctcctcg
     2701 agggccacat cgcagccacg gactggatca accagaaccc ggccgaggcg caggacgtgg
     2761 tgaacggcgg catcgccaag gtgaccggtc aggccatgaa ccccgccacg gtcgtggcgt
     2821 cgtggtccca gatggcgttc acgttcgatc cgctggcggc gacgatgagc aaggaggcca
     2881 gcaacgcgca atcggtgggc ctcctgcccg ggaccgtgaa cctcgacggg atctacgacc
     2941 tgtcgatcct caaccggctg ctgtcggcgg cggggcggcc gaccgtttca gatcactgac
     3001 aaagacctcc ca
//
LOCUS       DATGJT010000743         4089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1347019, whole genome shotgun sequence.
ACCESSION   DATGJT010000743 DATGJT010000000
VERSION     DATGJT010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4089
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347019"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(298..735)
                     /gene="dtd"
                     /locus_tag="VKX24_12950"
     CDS             complement(298..735)
                     /gene="dtd"
                     /locus_tag="VKX24_12950"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011207337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HLJ09437.1"
                     /translation="MRALIQRVNRASVTVDGDVVGEIGRGLCVFVGVTHSDDEAVAAK
                     LAERVWRLRVFDDDAGFMNVPVGEAGGDVLVVSQFTLYGDTRKGRRPSWAAAARPEQA
                     EPLVERFTAALRALGAKVATGRFAAHMQVELVNDGPVTVTIEA"
     gene            complement(747..938)
                     /locus_tag="VKX24_12955"
     CDS             complement(747..938)
                     /locus_tag="VKX24_12955"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HLJ09438.1"
                     /translation="MAAMYHDNGVRRETNTSTVSEGPKGMTAFAEMFFAAVPDAVCEA
                     RTWLQTGDTLAVEWTWSGR"
     gene            1063..>4089
                     /locus_tag="VKX24_12960"
     CDS             1063..>4089
                     /locus_tag="VKX24_12960"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ09439.1"
                     /translation="MVGEGGVGVARSTATVVFTDLVGSTELRSHLGEDAAEELRRTHD
                     GLVAEAVERNRGRLVKHLGDGMMATFSGASDGLNAAVAIQQALDRHNRSASSGGPLEA
                     RIGVSAGDVAVEDGDCFGTPVIEAARLCAAAGGGRILASEVVRLLVGTAGGHHIVPAG
                     TLELKGLPSPVAAYEVTWEALRQPALPMPAFLTRTGRVFVGREEEIERLLQIWKEATA
                     GERRVALLAGEPGIGKTRLAVELAVRVQAAGGVVLAGRCDEDLGVPYQPFVEALRHYV
                     TGAEDRRLGRYPEELTRLLPEIGQLVAPLAEPLRSDPETERYRLFDAMASWLADVSAE
                     APVLLVLDDLHWAAKPTLLLLRHVLRSQEPLRLLVLVTYRDSDIGRGQPMSQLLAELR
                     RDGAMERLALNGLDAPAVAAFIEAVAGHRLDDEEEQALPTVVWRETDGNPFFLGEVLR
                     HLSESGAVEQRGGRWVLNAAVDELGIPEGVRDVVGQRLSRLAEPTNRVLATAAVVGPE
                     FEPAVVERAAGVGQDEVLAAVEEALGARLLVEVSADRYRFAHALVRATLYDELSGPRR
                     LSLHRRVAEAIESLHGPALDDHLPALAHHWARASAPAAATAQAVDYATRAGDRALGQL
                     AHDQAVGYYRQALELLEVAEGCTERQPLELHIALGEAERRAGDTAHRETLLQACRLAA
                     ERGDAEALARAALANTRGAYASAVGAVDHDRVAALEAALGAVGSEATPTRARLLAALA
                     QELTYAGDRRHRVRLADEALAIARRLGDAATLADVLLQRFLTIYFPDNLDERLANTEE
                     VVTLGGELDDPVITARALVLRFRALAESGDIRAADLQLEQAEAITEELGQPTLQWLVG
                     LNRTARTILAGDLEAGERRALAGFEIGQATGQADAQSWLAGHLFIVRFEQDRLGEVER
                     RLKDTVAAVPGLLVFRAYLALLLCELDRPAEAAEHYELLAAENFSGLPQDSTWVLSAP
                     FCAAVAAHLGDRMRARALFDLLVPHAGQFLFTAVGSL"
BASE COUNT          547 a         1539 c         1437 g          566 t
ORIGIN      
        1 cccgaatccg gggaaatctc caggccgtag tagggctccc agtcgctctc gagggccggc
       61 gtatcgatgc tcgtctcctt ggggacgcgc cggaagcgca tccgctcggt gtcgaagagc
      121 cagacactgt ggcacgagtc gatgcgttcc atcacggcac tccagtctcg gaacgtcccg
      181 gcccccgagc accgggcggc tcccccgggc aaggctagcg ggccgtcgcg tgtcgcgcct
      241 ccatgcccgc cgccggccgc cgtcaaacct gctcgtccca cggtccgtgg ccatttgtca
      301 ggcttcgatc gtgaccgtga ccggcccgtc gttgaccagc tcgacctgca tgtgggcggc
      361 gaagcggccc gtggccacct tggccccgag cgcccgcagg gcagcggtga accgctcgac
      421 gagcggctcg gcctgctccg ggcgggccgc cgccgcccac gacggccgcc ggcccttccg
      481 ggtgtcgccg tagagcgtga actggctgac gacgaggacg tccccgccgg cctcgccgac
      541 ggggacgttc atgaacccgg cgtcgtcgtc gaagacccgc agccgccaga cgcgctcggc
      601 cagcttggcg gccaccgcct cgtcgtcgga gtgggtgacg ccgacgaaga cgcacaggcc
      661 ccggccgatc tcgccgacga cgtccccgtc gaccgtgacc gacgcccggt tgacccgctg
      721 gatcagcgcc cgcacggagc gggacgctag cggcctgacc aggtccactc cacggccagc
      781 gtgtcgccgg tctgcagcca cgtccgggcc tcacacacgg cgtcgggaac cgcggcgaag
      841 aacatctccg cgaaagcggt catccccttc gggccctcgc tcactgtgct cgtgttggtc
      901 tcccgccgca ccccgttgtc gtggtacatc gcggccacgt cggccggcgt ggcccctttc
      961 ccgaagctcc agctgcgcgc gtcgccggtc agacgcctgg aacgtcacca ctggcacacg
     1021 ggccggtgcc cgcgacgggc agcgatacct tacgattccg gggtggtcgg tgagggaggc
     1081 gtgggggtgg ccaggtcgac ggcgacggtg gtcttcacag acctcgtcgg ctcgacggag
     1141 ttgcggtctc atctcggcga ggacgcggcc gaggaacttc gccggaccca cgacggcctc
     1201 gtcgccgagg ccgtcgagag gaaccgcggg cgcctcgtga agcacctggg cgacgggatg
     1261 atggccacct tcagcggagc gtcggacggg ctcaacgccg cggtggccat ccagcaggcc
     1321 ctcgaccgcc ataaccgctc agcctcgagc ggcgggcccc tcgaggcgcg catcggcgtc
     1381 agcgccgggg atgtcgccgt cgaggacggg gactgcttcg gcacgccggt gatcgaggcg
     1441 gcccggctct gcgccgcggc ggggggaggc aggatcctgg ccagcgaggt tgtccgtctg
     1501 ctggtcggga cggccggcgg acatcacatc gtcccggccg gcaccctcga gttgaagggc
     1561 ttgccgtcgc cggtggcggc gtacgaggtg acgtgggagg cactccgcca gccggccctg
     1621 ccgatgcccg ccttcctcac ccggaccggc cgggtcttcg tcggccggga ggaggagatc
     1681 gagcgcctcc tgcagatttg gaaggaggcg acggcggggg agcggcgagt ggcgctcctg
     1741 gccggggaac ccgggatcgg caagacccgc ctggccgtcg aactcgccgt gcgggtccag
     1801 gcggcgggcg gtgtcgtact ggccggacgt tgcgacgagg acctcggcgt tccctaccaa
     1861 ccgttcgtcg aggcgctccg ccattacgtc acgggcgccg aggaccgccg actcggacgc
     1921 tatcccgagg agctgacacg tctcctcccc gaaatcggac agctcgtcgc acccctggcc
     1981 gagccgctgc gctcggaccc cgagaccgag cgctaccgcc tcttcgacgc catggcctcg
     2041 tggctggcgg acgtctccgc cgaagcaccc gtcctgctcg tgctcgacga tctccactgg
     2101 gcggcgaagc cgacgctgct cctgctccgc cacgtgttgc gctcccagga gccgctgcgg
     2161 ctcctcgtcc tggtcacata ccgcgacagc gacatcgggc ggggccaacc catgagccag
     2221 ctgctcgccg agctccgccg ggacggggcg atggaacggc tggcgctcaa cggcctcgac
     2281 gcgccggccg tcgctgcctt catcgaggcc gtcgccggcc accgcctcga cgacgaggag
     2341 gagcaggcgc tgcccaccgt ggtgtggcgt gagaccgacg gcaacccgtt cttcctgggc
     2401 gaggtgctcc gccacctctc ggaatcgggc gccgtcgaac agcgcggcgg tcggtgggtc
     2461 ctcaacgcgg cggtcgacga gctcgggatt cccgagggag tccgggacgt ggtcggccag
     2521 cgtctctccc ggcttgccga accgaccaat cgcgtgctgg cgaccgccgc cgtcgtcggc
     2581 ccggagttcg agccggccgt cgtggagcgc gccgcgggcg tcggccagga cgaggtcttg
     2641 gcggccgtgg aggaggccct cggcgcccgc ctgctcgtcg aggtgtccgc ggaccgctac
     2701 cgcttcgccc acgccctggt gcgagcgacg ctgtacgacg agttgtccgg acctcgccgc
     2761 ctctccctcc accgccgggt ggcggaagcg atcgagtcgc tccacggtcc cgccctcgac
     2821 gaccatctcc ccgccctagc tcaccactgg gcgcgggcct ccgcgccggc ggcggccacg
     2881 gcccaggccg tcgactacgc cacccgggcc ggggatcgcg ccctggggca actggcccac
     2941 gaccaggccg tcggctacta ccgccaggct ctggagctgc tcgaggtcgc cgagggctgc
     3001 accgagcggc agccgctcga actccacatc gccctcggag aggccgagcg ccgagcgggc
     3061 gacaccgccc atcgagagac gctgctccag gcttgtcgac tcgccgccga gcggggcgac
     3121 gccgaggcgc tggcccgggc ggccttggcg aacacccgag gcgcctacgc cagtgcggtc
     3181 ggcgccgtcg accatgaccg cgtggcggca ctcgaagcag cgctgggagc ggtcggttcc
     3241 gaggccaccc cgacccgggc ccgcctgctg gccgccctgg cccaggaact gacgtacgcc
     3301 ggcgaccgcc ggcaccgggt gcgtctggcc gacgaggccc tggccatcgc ccggcgcctc
     3361 ggggacgccg ccacgctggc cgacgtcctg ctgcagcggt tcctcacgat ctacttcccc
     3421 gacaacctcg acgagcgact ggcgaacacc gaggaggtcg tcaccctcgg cggagagctc
     3481 gacgaccccg tcatcaccgc ccgcgctctg gtgctccgct tccgggccct ggccgagtca
     3541 ggcgacatcc gggcggccga tctccagctc gagcaggcgg aggccatcac cgaggagctc
     3601 ggtcagccca cgctgcagtg gctcgtcggg ctgaaccgga cggcccgcac gatcctggcc
     3661 ggcgacctgg aggcgggcga gcgacgagcg ctcgccggat tcgagatagg acaggccacc
     3721 ggccaggccg acgcccagag ctggttggcc ggccacctgt tcatcgtccg cttcgaacag
     3781 gaccgcctgg gcgaggtcga gcggcgcctc aaggacaccg tggccgcggt ccccggcctg
     3841 ctcgtgttcc gcgcctatct ggctctgctg ctctgcgagc tcgaccggcc cgccgaggcc
     3901 gccgaacact acgagctcct ggcggcggag aacttcagcg gtcttcccca ggacagcacc
     3961 tgggtgctgt ccgccccctt ctgcgccgcc gtggcggcgc acctgggcga ccggatgcga
     4021 gcccgggccc tgttcgacct gctcgtgccc cacgccggcc agttcctgtt cacggcggtg
     4081 ggctccctc
//
LOCUS       DATGJT010000744         2682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1347051, whole genome shotgun sequence.
ACCESSION   DATGJT010000744 DATGJT010000000
VERSION     DATGJT010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347051"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..771
                     /gene="nth"
                     /locus_tag="VKX24_12965"
     CDS             4..771
                     /gene="nth"
                     /locus_tag="VKX24_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011720828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HLJ09440.1"
                     /translation="MRTIDGPADPEVGRTPRVTCAAMARAASSARAIKARARTVVERL
                     ASEYPGTAAELCALNFDTPFQLLAATILSAQSTDVRVNLVTPELFKAFPRPADLAAAD
                     PEVVEDLVRSTGFFRAKTKSLIGMASAVVDRFGGEVPDDIDDLVTLPGVGRKTANVVL
                     SVAFGLPGLPVDTHVGRLTRRLGLTTQTDPVKVEKDIVALVPEEELGALSLRLILHGR
                     AVCVARRPRCEDCVLNDVCPSSTVARPRRPPRGTPPA"
     gene            826..1092
                     /locus_tag="VKX24_12970"
     CDS             826..1092
                     /locus_tag="VKX24_12970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013864257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09441.1"
                     /translation="MVVKRSVSLGDEVAAAVEQAAKEDGVSFSAWLSGAAERQLRVRQ
                     GLRAVAAWEAEAGGLSAEEIAAGEDLLARLLSGVSGMASRVRRR"
     gene            1092..1487
                     /locus_tag="VKX24_12975"
     CDS             1092..1487
                     /locus_tag="VKX24_12975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twitching motility protein PilT"
                     /protein_id="HLJ09442.1"
                     /translation="MADTRSGLVYGVGALRAAARGDRMFWAVHRAALVHGIVPVVPVS
                     VIAEGFRTEARADRIQDLLDGAEIEVMGPEQARRIGELAVKASTTDLLAATVAETASR
                     RNCAVVASRQTALATAARLLGHKLVLHSI"
     gene            1719..>2682
                     /locus_tag="VKX24_12980"
     CDS             1719..>2682
                     /locus_tag="VKX24_12980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016645677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HLJ09443.1"
                     /translation="MPRTTLNLGILAHVDAGKTTLTERLLHAAGVIESVGSVDKGTTH
                     TDWLPLERERGITIKSAVVSFTMEDIAVNLIDTPGHPDFIAEVERVLGVLDGVVLVVS
                     AVEGVQPQTRLLMRVLKRLALPTLIFVNKIDRMGARPEEVVASIRRRLRIEAVPLGSV
                     SDAGRRAAQFVPFPEADPAFLDDLAADLAQRDEGVFAALDGTGVARSLRAELVRQSKA
                     ALVHPLLFGSALSGAGVSALTTAIASFLPTRAGAADAPLAGSVFKIERGPAGERLAYL
                     CLSAGTLRIRERVSFAGDNEEKVTGIAVFSEGKLVGRPALVAGEI"
BASE COUNT          372 a          959 c          942 g          409 t
ORIGIN      
        1 cacgtgcgca ccatagatgg ccccgccgac ccggaggtcg gccgcacgcc ccgggtaacg
       61 tgcgcggcca tggcgagggc cgcatcgagc gcgcgggcga tcaaggcgcg ggctcggacc
      121 gtcgtggaac gcctggcctc cgagtacccc ggcaccgccg ccgaactctg cgccctcaac
      181 ttcgacactc cgttccagct gctggcggcg acgatccttt cggcccagag caccgacgtc
      241 cgagtcaacc tggtgacccc cgagctgttc aaagcgtttc cccgcccggc cgacctggcg
      301 gcggcggacc ccgaggttgt cgaggacctg gtgcggtcga cgggtttctt ccgggcgaag
      361 acgaagagcc tcatcggcat ggcctcggcc gtcgtcgatc gattcggtgg cgaggtcccc
      421 gacgacatcg atgacctggt gaccctgccg ggagtcggtc gaaagaccgc caacgtggtc
      481 ctgagcgtcg cgttcggcct ccccggactc ccggtcgaca cgcacgtcgg gagactgact
      541 cggcggctcg gtctcaccac gcagaccgac ccggtcaaag tcgaaaagga catcgtggcc
      601 ctggtcccgg aggaggagct tggcgctctg agtctccggc tcatcctcca tgggcgggcc
      661 gtgtgcgtgg cccgccggcc gcgctgcgag gactgcgtcc tgaacgatgt ctgcccgtcg
      721 tcgacggtgg cgcggccgcg ccgcccgccg cgcgggacgc cgccggcctg aatggtgctc
      781 caggcagtag taccgcagta gtactacggg tgctactctt cggcgatggt cgtgaagcgt
      841 tccgtttcgc tcggtgacga ggtcgcggca gccgttgagc aggcggccaa ggaggacggg
      901 gtctcgttca gcgcgtggct ctcgggcgcg gccgagcgcc agctgagggt gcgccagggg
      961 ctgcgcgcgg tggcggcctg ggaggccgag gccgggggat tgagcgccga ggagatcgcc
     1021 gccggcgagg acctcctcgc ccgcctgctc tcgggcgtgt ccgggatggc ctcccgggtc
     1081 cggcgtcgct gatggcggac acccgctccg gactggtcta cggcgtggga gcgctgcggg
     1141 ccgccgcccg gggcgaccgg atgttctggg cggtccaccg ggccgccctc gtccacggga
     1201 tcgtcccggt ggtgcccgtc tcggtcatcg ccgagggctt ccgcaccgag gccagggcgg
     1261 accggatcca ggacctgctc gacggcgccg agatcgaggt gatggggccc gagcaggccc
     1321 ggcgcatcgg ggagctggcg gtcaaggcct cgacgaccga cctgttggcc gcgaccgtgg
     1381 ccgagaccgc gtcccgccgg aactgcgcgg tcgtcgcctc ccgccagaca gcgctcgcca
     1441 ccgcggcgcg gctgctcggc cacaaactcg tcctccactc gatctgagcg caccccccgg
     1501 tggggtgcgg cgaccgggcg ctgacccgtc gcacgacggg gcgcacaccc cgacatcgat
     1561 gaacgacggc tccggtggcg accgactccg ggagccgctg ctcgagccag acgcccgcca
     1621 cgtcctctat gctcgggcgc aatccaccga ggagagcacc atgcggcaga cgtcattgac
     1681 catccgaaac gtccttggga cttggaaggg aatgacgttt gccgcgcacc acgctcaatt
     1741 tggggatcct cgcccacgtc gacgccggta agaccacgct caccgagcgg ctgctccacg
     1801 ccgccggtgt catcgagagc gtcggcagtg tcgacaaggg gaccacgcac accgactggc
     1861 ttccgctcga gcgcgagcgg gggatcacga tcaagtccgc cgtcgtctcc ttcacgatgg
     1921 aggacatcgc cgtcaacctg atcgacaccc ccggccaccc cgacttcatc gccgaagtcg
     1981 aacgggtgct cggggtcctc gatggggtcg tcctggtggt ctcggccgtc gagggagtcc
     2041 agccccagac ccgtctcctc atgcgggtcc tcaaacggtt ggcgctaccg actctgatct
     2101 tcgtgaacaa gatcgaccgc atgggggccc gcccggagga ggtggtcgcc tcgatccgtc
     2161 ggcgactgcg gatcgaggcg gtaccgctcg ggtcggtcag cgacgccggt cgtcgggcgg
     2221 cgcagttcgt ccccttcccc gaagccgatc ccgccttcct cgacgatctc gccgccgacc
     2281 tcgcccagcg ggacgagggc gtgttcgccg cgctcgacgg cacgggggtc gcgcggtccc
     2341 tgcgagccga actcgtccgg cagagcaagg cggcgctcgt gcatccgttg ctcttcggct
     2401 cggccctctc gggagccggg gtctcggcac tcacgacggc gatcgcctcg ttcctgccga
     2461 cccgagccgg cgctgccgat gcccctctcg ccgggtcggt gttcaagatc gaacgcggtc
     2521 cggccggcga gaggctcgcc tacctctgct tgtccgccgg gacccttcgc atccgcgagc
     2581 gggtctcgtt cgctggtgac aacgaggaga aggtcaccgg catcgccgtc ttctccgagg
     2641 ggaagctggt cggccggccg gccctcgttg ccggcgagat cg
//
LOCUS       DATGJT010000745         3714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_204415, whole genome shotgun sequence.
ACCESSION   DATGJT010000745 DATGJT010000000
VERSION     DATGJT010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204415"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..983)
                     /locus_tag="VKX24_12985"
     CDS             complement(75..983)
                     /locus_tag="VKX24_12985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09444.1"
                     /translation="MGHVKRQLVIWAAIATTAALLPGLALADNASPDFGGHHGRDKQH
                     GNTKLAVRGRALSRGEHDAYGMQIRGRSGDKPTDASGMVRFGQRGGNAAEGFVGQISC
                     LSEDQAGIVTVTGTIKRGGTRTSNGDKGRKGLKPGKGMEPGTGTATVSDDDPTAMLDE
                     LAPWDDSDFADLAAADDSAGPNDADTVAADPAPPAVPGAPSAPNMPAPPNKDPNKKHD
                     GKNGGTLAGKDFAFTIDVPGNPQHFSQPKIGDKGTLAACSGGGAPVAVTRGGFRTRDA
                     NGTKGAKGHDGHDGRRGDHHHRWWRR"
     gene            complement(1128..2339)
                     /locus_tag="VKX24_12990"
     CDS             complement(1128..2339)
                     /locus_tag="VKX24_12990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09445.1"
                     /translation="MAFRRFPSRGLRRCSTILTVLLLATACAPSGSGRTARQTGAAEA
                     PSAAPATAAVEQGSWRHIAEPPIPPAGGMATAWTGHQLVVWGGGSGGGGNWQSSNAGA
                     AYDPAADRWEALPPAPVPGRIGASAVWTGREILFWGGQTAADAIFADGAAYDPEAKRW
                     RTLPPAPIGPRTQHQAVWTGREMVVWGGYARCCPIDSVVHDPAAAAYDPATNRWRRIA
                     DVPPPWSGDDGYAATVAADGRPLVWRRGRLGAYDPAADRWSEVPGAPAAATPPASPAA
                     ATIDPVVLAAFAGGDVFTWIGNAGRLDGAAWRPSAGTWRRTAPLDAQTGSTIVAGPPD
                     RLFAAAGQSARILEYRIADDRWSELPLPPIPTRSDATVLWTGSELVVWGGMGDEGPEM
                     DGAAWRCCTAP"
     gene            complement(2408..3364)
                     /locus_tag="VKX24_12995"
     CDS             complement(2408..3364)
                     /locus_tag="VKX24_12995"
                     /inference="COORDINATES: protein motif:HMM:NF016552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09446.1"
                     /translation="MSRRSRLRRGAPLLAAALALGAVVAGPGVQAQGPAGLNHHPVLP
                     SMVDGHPRGLSLGLFGGRPIKYHGGPVILGTTHAYAIWYGNWTAGAYPATPGLMTSFL
                     GNDGGSPYFNINTTYSMTTGTTTTAVTNAVSFGGSAFIGYDNGKTTLSDADVATEVAR
                     GIASGQLPSTIADPNGVYFLLTSSDVRESSGFLTLYCGFHDDTTIGGVVTKYAFVGDP
                     SRSLSSCATQTATSPNNNVAGDAMVNVAAHELEEAVTDPLLNAWYDNGGNENADKCAW
                     NFGTSYTAANGSKANMKLRDGHDYYIQQNWPNVGNGACALSH"
BASE COUNT          421 a         1288 c         1438 g          567 t
ORIGIN      
        1 cctgccggcc ccggacccgt cgccagcgcg ggtccgagac cggcagaccg gtcgcggtgg
       61 tcttctgccg cgagctagcg gcgccaccag cggtggtggt ggtcgccccg gcggccgtcg
      121 tggccgtcgt ggcccttggc gcccttggtg ccgttggcgt cgcgggtgcg gaacccgccg
      181 cgggtgacgg ccaccggggc gccgccgccg ctgcaggcgg ccagcgtgcc cttgtcgccg
      241 atcttcggct gcgagaagtg ctgcgggttg cccgggacgt cgatcgtgaa ggcgaagtcc
      301 ttcccggcca gcgttccgcc gttcttgccg tcgtgcttct tgttggggtc cttgttgggc
      361 ggcgccggca tgttcggggc cgacggcgcg cccggcacgg ccggcggggc cgggtcggcg
      421 gcgacggtgt cggcgtcgtt cgggccggcg gagtcgtcgg cggcggcgag gtcggcgaag
      481 tcgctgtcgt cccacggcgc cagctcatcg agcatggccg tcgggtcgtc gtcgctcacg
      541 gtggcggtgc cggtgccggg ctccatccct ttgccgggct tcaggccctt ccggcccttg
      601 tcgccgttgg aggtgcgggt gccgccccgc ttgatcgtgc cggtgacggt gacgatgccg
      661 gcctggtcct cgctgaggca cgagatctgg ccgacgaagc cttcggcggc gttgcctccg
      721 cgctgcccga agcggaccat tccggacgcg tcggtcggct tgtcgccgct gcgaccccgg
      781 atctgcatcc cgtaggcgtc gtgctctccc cggctcagcg cccgccctct gacggccagc
      841 ttggtgttgc cgtgctgctt gtcacggccg tggtggccgc cgaagtcggg gctggcgttg
      901 tcggccagcg ccagacccgg cagcaacgcg gccgtggtgg cgatggcagc ccagatgacg
      961 agctgccgtt tgacgtgccc catgcaccct ccttcgatcg agcggccctg gtgcgatcgc
     1021 gggacatccg gtttgcccgg aatgtcggta tcgaccgtca ggtcccggtt tctattcgcg
     1081 ccgggggccg ggggggctga gaggaccctg agtcgcctga gggccggtta gggcgccgta
     1141 cagcagcgcc aggcggcgcc gtccatctcc gggccctcgt cgcccatacc gccccacacg
     1201 acgagctccg agcccgtcca gagcaccgtg gcgtcgctgc gggtcgggat cggcggcagc
     1261 gggagctcgc tccaccggtc gtcggcgatg cggtactcga ggatgcgggc cgattggccg
     1321 gcggcagcga agagccggtc gggcggcccg gccacgatcg tggagccggt ctgggcgtcg
     1381 agcggcgccg tccgccgcca ggttccggcg gacgggcgcc aggcggcgcc gtcgagccgc
     1441 ccggcgttgc cgatccaggt gaagacgtcg ccgccggcga aggcggcgag gacgacgggg
     1501 tcgatggtgg cggcggccgg cgacgccggc ggcgtggcgg cggccggcgc gccggggacc
     1561 tcggaccacc ggtcggcggc cgggtcgtag gcgccgagcc ttcccctgcg ccagacgagg
     1621 ggccggccgt cggcggccac ggtggcggcg tacccgtcgt cgccgctcca cggcgggggg
     1681 acgtcggcga tccgccgcca gcggttcgtg gccgggtcgt aggcggcggc cgccgggtcg
     1741 tggaccacgc tgtcgatcgg gcagcagcgg gcgtagccgc cccagacgac catctcccgg
     1801 cccgtccaga ccgcctggtg ctgggtgcgg gggccgatgg gggccggcgg cagggtccgc
     1861 cagcgcttgg cctcggggtc gtaggcggcg ccgtcggcga agatcgcatc agccgccgtc
     1921 tgcccgcccc agaacaggat ttcccggccc gtccacacgg cgctggcccc gatgcggccg
     1981 ggcaccggcg ccggcggcag cgcctcccac cggtcggcgg cggggtcgta ggcggcgccg
     2041 gcgttggagg actgccagtt gccgccgccc cccgacccgc cgccccagac gacgagctgg
     2101 tggccggtcc aggccgtggc catcccgccc gccggtggga tcggcggttc ggcgatgtgg
     2161 cgccaggagc cctgctcgac tgcggcggtg gcaggggcgg ccgacggtgc ctcggcggcg
     2221 ccggtctgtc gggccgtcct gcccgatccc gacggcgcgc acgccgtcgc caggagcagc
     2281 accgtcagga tcgtcgaaca ccgtcggaga ccccggctcg ggaaccggcg gaaggccacc
     2341 gggcgatcgt aggtggcccg ggccgggggg cggcgtcaat ccgccccgcc ggccgagccg
     2401 cggagtgcta gtgcgacagg gcgcaggcgc cgttgccgac gttcggccag ttctgctgga
     2461 tgtagtagtc gtggccgtct ctcagcttca tgttggcctt cgagccgttg gccgccgtgt
     2521 aggaggtgcc gaagttccag gcgcacttgt cggcgttctc gttgccgccg ttgtcgtacc
     2581 aggcgttgag gagcgggtcg gtcacggcct cctcgagctc gtgggcggcg acgttgacca
     2641 tggcgtcgcc ggcgacgttg ttgttcggcg acgtggccgt ctgggtggcg cagctcgaca
     2701 ggctccggct cggatcgccg acgaaggcgt atttggtgac cacgcccccg atggtggtgt
     2761 cgtcgtggaa tccgcagtac agggtcagga acccgctcga ctcccgcacg tcgctgctgg
     2821 tgagcaggaa gtacacgccg ttggggtcgg cgatcgtcga cggcagctgg cccgaggcga
     2881 tgccccgggc gacctcggtg gccacgtcgg cgtcgctcag cgtcgtcttg ccgttgtcgt
     2941 aaccgatgaa ggccgagccg ccgaaggaca cggcgttggt caccgccgtc gtggtggtcc
     3001 ccgtcgtcat gctgtaggtc gtgttgatgt tgaagtacgg gctcccgccg tcgttgccga
     3061 ggaacgacgt catgaggccc ggcgtggccg ggtaggcacc ggcggtccag ttgccgtacc
     3121 agatggcgta ggcgtgcgtc gtgccgagga tgaccggccc gccgtggtac ttgatcgggc
     3181 gtccgccgaa cagcccgagc gacagccccc tcgggtggcc gtccaccatc gagggcagca
     3241 ccgggtggtg attcaatccc gccgggccct gggcctggac gccgggcccg gcgacgacgg
     3301 cgcccagggc gagggcggca gccagcagtg gcgcgccgcg gcgcagccta gaacgacgtg
     3361 acatgtgaat cgaacccccc gacagcgagg cgtcagccgt ccgctcaggc tgcccgatcc
     3421 gccccgccgt gccgattcag agttcaagtg cctggaaggt gtttcctgcc cgatggggac
     3481 aaggtgccca acccgcccga tgcggacgat tggtggaaac cgccgccgtg cgccgggagg
     3541 aatgccgcgt gccggtcggc tgaggattgg caccctctgg tgcatccgtc acgctcatgg
     3601 acatgacgac ccctgacccc gacgcgacca ccgtccggcg cctcgtgctg atgggccagg
     3661 gctacgtcgg cctgccggtg gccatgcggg cggtggccaa ggggtactcc gtcg
//
LOCUS       DATGJT010000746         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1033309, whole genome shotgun sequence.
ACCESSION   DATGJT010000746 DATGJT010000000
VERSION     DATGJT010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1033309"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VKX24_13000"
     CDS             complement(<1..495)
                     /locus_tag="VKX24_13000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HLJ09447.1"
                     /translation="MPETSGYLRHPSVRGETIAFVTEDDLWSVPAAGGVARRLTANLS
                     EVSHPALSPDGRHVAFTSREEHHPEVYCMPATGGPATRVTFLGATANVRGWTPDGRIL
                     FTSDAGRPFHHMIHPYAVAADGGPVERLPYGPAREVAFGPKPKGRNGKTPVVIGRNTA
                     DPARW"
     gene            622..1542
                     /locus_tag="VKX24_13005"
     CDS             622..1542
                     /locus_tag="VKX24_13005"
                     /inference="COORDINATES: protein motif:HMM:NF024734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin domain-containing protein"
                     /protein_id="HLJ09448.1"
                     /translation="MDKDSLARAAAVAGRQYGHVTLDQALQAGLTLAAVRRLRAEGHW
                     VRVSKGVYRIVGVTPTWRGRMRAACLQGGDEAVISHRSAAAVWGLEGFEPPRIVDVSV
                     PASRRPRIDGARVHRRDVARRAVRDGIPVTPIPETILDLCAVSRNEGIPLRALDDVRR
                     RKLVSGAELERCAAEHTPRKSAGIPLYRALLERRLGRTPPGTVFAAEVLDLLVAAGLP
                     EPEAEFWVTIRGRRYRIDLAYPRAKIAIECLGKIGHLNERSFEEDPVRNNDLALDGWL
                     QIQLTYRRRADEPGAVVADVEAALARRAAA"
     gene            1564..>2085
                     /locus_tag="VKX24_13010"
     CDS             1564..>2085
                     /locus_tag="VKX24_13010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HLJ09449.1"
                     /translation="MASCMRCGGELPATARFCPTCGRPVEPEVGPPAPPITPSAWSGL
                     QLPAWVTGDWPLVAAGAAVLLGAVFAVSLIVGAVAAVAVSGNADAVPCGAGVGAHLAF
                     AAFGARTVAACRSTTGTALAVSFLPLFWAFVGGLATEVAMRFAWPRLADDRRRRIAYA
                     AKLAVTTGIALGVI"
BASE COUNT          251 a          740 c          807 g          287 t
ORIGIN      
        1 ccagcgggcg gggtcggcgg tgttgcggcc gatcacgacc ggcgtcttcc cgttgcgccc
       61 cttgggcttc gggccgaagg ccacctctcg ggccggcccg taggggagcc gctccaccgg
      121 gccaccgtcc gcagcgacgg cgtagggatg gatcatgtgg tggaagggcc ggccggcgtc
      181 ggaggtgaag aggatccgcc cgtccggcgt ccagccccgg acgttggcgg tggcgccgag
      241 gaacgtcacc cgggtggccg ggccgccggt ggccggcatg cagtacacct cggggtggtg
      301 ctcctcccgg ctggtgaagg cgacgtggcg cccgtcgggc gacagcgccg ggtggctcac
      361 ctccgagagg ttggcggtga gccgccgggc gacgcccccg gccgccggca ccgaccacag
      421 gtcgtcctcg gtgacgaagg cgatcgtctc cccccggaca ctgggatgcc gcagataacc
      481 gctggtctcg ggcatgacct gccaggctaa cgttcccccg acccgcactt cccccgcccg
      541 gcttccccct gccccacaag acgtttggac ttttgctgcg acctgtccgc agcaaaagtc
      601 caaagctccc gaggaggacg ggtggacaag gactctctgg cccgagcggc cgccgtcgcc
      661 ggccgccagt acggccacgt cacactggac caagccctcc aggcgggcct gaccctcgcc
      721 gcagtgcggc ggttgcgggc cgagggccac tgggtccggg tcagcaaagg ggtctaccgg
      781 atcgtcgggg tcacaccgac ctggcggggg cggatgaggg ccgcttgcct gcagggcggg
      841 gacgaggccg tcatctccca ccggtcggcg gcggcggtgt gggggctgga ggggttcgag
      901 ccgccgagga tcgtcgacgt gagcgtcccg gcgagccggc ggccccgcat cgacggcgct
      961 cgggttcacc ggcgggacgt cgctcggcgg gcggtgcggg acgggatccc ggtcacgccg
     1021 atcccggaga cgatcctcga cctctgcgcc gtgagccgga acgaggggat cccgttgcgg
     1081 gcgctggacg acgtgcggcg gcggaagctg gtgagcggcg ccgaactgga acgctgcgcc
     1141 gccgagcaca ccccgcggaa gtccgctgga atcccgctgt accgggcgtt gctggaacgg
     1201 cggctcgggc ggaccccacc ggggaccgtg ttcgccgccg aagtcctcga cctgctggtg
     1261 gcggcggggc tgccggagcc cgaggccgag ttctgggtca cgatccgggg gcggcggtac
     1321 cggatcgacc tcgcctaccc gagagccaag atcgccatcg agtgcctcgg caagatcggg
     1381 cacctcaacg agcggtcgtt cgaggaggat ccggtccgca acaacgacct cgccctcgac
     1441 gggtggctcc agatccagtt gacctaccgg cggcgggcgg acgagcccgg cgcggtcgtg
     1501 gccgatgtcg aagcggcgct ggcgcgtcgg gcggcggcct gaagccgagc cacaatggcg
     1561 gcgatggcgt cgtgcatgcg ctgcgggggt gaactgccgg ccacggcccg gttctgcccg
     1621 acctgcggcc ggcccgtcga gccggaggtg gggccgccgg cgcccccgat cacgccgtcg
     1681 gcctggtcgg gtctgcagct tccggcctgg gtgaccggcg actggccgct ggtggcggcg
     1741 ggcgcggcgg tgctcctcgg cgcggtgttc gccgtgtcgc tgatcgtcgg cgccgtcgcc
     1801 gcggtggccg tctcgggcaa cgccgacgcc gtcccctgcg gcgccggcgt cggcgcccat
     1861 ctggccttcg ccgccttcgg ggcccggacg gtcgccgcct gccggagcac gacgggaacg
     1921 gcgctggcgg tgtcgttcct gccgctgttc tgggccttcg tcggcgggct ggccaccgag
     1981 gtggcgatgc gcttcgcctg gccccggctg gccgacgacc gccggcggcg catcgcctac
     2041 gccgccaagc tggccgtgac gaccgggatc gccctcggtg tcatc
//
LOCUS       DATGJT010000747         3210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1238242, whole genome shotgun sequence.
ACCESSION   DATGJT010000747 DATGJT010000000
VERSION     DATGJT010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1238242"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VKX24_13015"
     CDS             <1..263
                     /locus_tag="VKX24_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09450.1"
                     /translation="EAKNGDKVVMLSKYGGGVGILYDAVPGNDHCNGRIAPIGPSDPY
                     ANLKECLHLDDAVEALARDGVGPPGLAGPGRGAAGERVDVAG"
     gene            335..532
                     /locus_tag="VKX24_13020"
     CDS             335..532
                     /locus_tag="VKX24_13020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09451.1"
                     /translation="MAIVTAILIKLTAWAVLHWRGSLAASAAVALLIWWLVSPPATRV
                     ELVVFAGIAAALAYRLAKGLA"
     gene            529..834
                     /locus_tag="VKX24_13025"
     CDS             529..834
                     /locus_tag="VKX24_13025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09452.1"
                     /translation="MTAVQLSRWKPALELLAWAGAVAGLAGVIVALVLPAPPPPRVPI
                     AMMSPKEAGEWIALLAPLVSAVAGAINTLWILYHRITAPRRPKPRKRPRKPDAPKAA"
     gene            955..1239
                     /locus_tag="VKX24_13030"
     CDS             955..1239
                     /locus_tag="VKX24_13030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09453.1"
                     /translation="MGLAADFQALGADQKQQAVLNGNLAAAQAAVNAGNQTITTASQQ
                     VVTDLQDTSTYPSGTAYVADPASTAGGILVLSLTPNQPPGFSAQPVPQAQ"
     gene            1454..1774
                     /locus_tag="VKX24_13035"
     CDS             1454..1774
                     /locus_tag="VKX24_13035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09454.1"
                     /translation="MPPATQARILKRIARYLDEEDEEGQTAPDRVVIAAARVMLAAGK
                     LSLAQQALDLARRKFEGKKSEVSLADLVRAAEERARRRIEERDNEDEQRAPGGIHGRH
                     EGGL"
     gene            1722..2144
                     /locus_tag="VKX24_13040"
     CDS             1722..2144
                     /locus_tag="VKX24_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09455.1"
                     /translation="MSSEHPAEFTVVTKVAYDALAGRYGAAVRAIQAHEEDLAAAHAD
                     RRRLLEDLRAARGEIAELSARCRDLERLHSEAVREIEALRRDREKVAGQLRDVGVRWI
                     CREPGHAIVLTAKPGRVEIAKGDDRHVHANPDCVEITL"
     gene            2144..>3210
                     /locus_tag="VKX24_13045"
     CDS             2144..>3210
                     /locus_tag="VKX24_13045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09456.1"
                     /translation="MPSDASDRLTELLSLCHDDPDLFNGAILGRKPYWRRQREIAESV
                     VKYRVTSAYTGNAVGKDYLVGGLIPWWLYTRHRSLVIVTGPGHTVLGSVTWKELRRAV
                     EGDESDPLASVPLGATVSQGVTASPLRCIVRGDWGALGYSTNSIERASGQHERKILVI
                     VEESSGVPDEIRDAIESFKFSRLLAIGNPLRARGWFVEHIRRAEEDRRNGVPPGLAFN
                     AIRVSSRESPDAHLEESPRGLADATWIAANERVYGKGSLWCNSHIDAIVPAEDAAQLI
                     PEEWLDYAANCERPPLRPFDPVSKTRRIACDLGEGVGRDSTAILVRDDLGVLEWVAGN
                     NLDLPAAAEHIRRLKEKWRVP"
BASE COUNT          506 a         1108 c         1167 g          429 t
ORIGIN      
        1 gcgaggccaa gaacggcgac aaggtcgtga tgctgagcaa atacggcggg ggcgtcggga
       61 tcctctacga cgccgtgccg ggcaacgacc actgcaacgg ccggatcgcg ccgataggcc
      121 ccagcgaccc gtatgccaat ctgaaggaat gcctccacct ggatgatgcg gtggaggcgc
      181 tggcgcgtga cggagtgggt ccgcctgggt tggcggggcc cggacgggga gctgctgggg
      241 agcgtgtcga tgtcgcggga tagggccagg cggttggcgg acctggccgg gctgatctgg
      301 cccgattacg aggcctcgat cgaggagcat cactgtggcg atcgtgaccg caatcctgat
      361 caagttgacg gcctgggcgg tgctgcactg gcggggcagc ctggccgcct cggcggccgt
      421 cgcgctgctc atctggtggc tggtctcgcc gccggcgacc cgcgtggagc tggtggtgtt
      481 cgcgggcatc gcggcggccc tggcctatcg cctggcgaag gggctggcat gacggccgtc
      541 cagctatcgc gctggaagcc ggcgctggag ctcctggcct gggccggggc cgtggcgggc
      601 ctggccggcg tgatcgtcgc cctggtcctc cccgccccgc cgccgccccg ggtgccgatc
      661 gcgatgatgt cgccgaaaga ggccggcgag tggatcgcgc tgctggcgcc gctggtctcg
      721 gccgtggccg gcgcgatcaa caccctgtgg atcctctacc accgaatcac cgcgccgagg
      781 cggcccaagc cgcggaagcg tccgcggaag cccgatgcgc cgaaggctgc ttgacctggc
      841 cgtctggctg ctggccgtgg ccatcgtcgc cggggcgatc gccctggggc tggccctccc
      901 cgagtggatt tccgagcctt tttagcgtct tgatttcgag gtgaggtgta aacgatggga
      961 ctcgcagcgg acttccaggc gctcggcgcc gaccagaagc aacaggccgt cctgaacggc
     1021 aacctggccg ccgcccaggc cgccgtgaac gccggcaacc agacgatcac cacggcctcc
     1081 cagcaggtgg tgaccgactt gcaggacacg tccacgtatc ccagcgggac ggcctacgtg
     1141 gccgacccgg cctcgaccgc gggcgggatc ctggtgctgt cgctgacgcc caaccagccg
     1201 ccgggcttct cggcccagcc ggtgccgcag gcgcagtaag ccaagagcgg gcacgccggg
     1261 cagccatcgc cgccgggcga tggggtctcc agcacgccgc cgcgacgcaa gctgggatgg
     1321 caacgcggcc tgacccggag tcataagaac accccggcca gggggccagg ggggccgtct
     1381 gggcgaccac gaggaggaac tcagccggtc cgagctgaag ctcgccgagc aggcgatccg
     1441 ccaggactgg ccggtgccgc cggcgacgca ggccaggatc ctcaagcgga tcgcccggta
     1501 cctggacgag gaagacgagg aagggcagac cgcacccgat cgggtcgtca tcgccgccgc
     1561 ccgcgtgatg ctggcggccg gcaagctgag cctggcccag caggcgctgg acctggcccg
     1621 gcggaagttc gaggggaaga agtccgaggt cagcctggcc gacctggtca gggcggccga
     1681 ggagcgggcc aggcgacgca tcgaggagcg tgacaacgaa gatgagcagc gagcacccgg
     1741 cggaattcac ggtcgtcacg aaggtggcct atgacgcgct ggcgggccgg tacggcgcgg
     1801 ccgtccgggc catccaggcc cacgaggagg acctggccgc cgcccacgcc gaccgccgca
     1861 ggctgctgga ggacctccgg gcggcccggg gcgagatcgc cgagctgtcg gcccgatgcc
     1921 gggacctcga acgcctgcat tccgaggccg tccgggagat cgaggccctc agacgagacc
     1981 gcgagaaggt cgcgggccag ctccgcgacg tgggcgtccg gtggatctgc cgcgagcccg
     2041 gccatgccat cgtcctcacg gcgaagcccg gccgggtgga gatcgccaag ggcgacgatc
     2101 ggcatgtcca cgccaatccg gattgcgttg aaatcacgct atgatgccat ccgacgcatc
     2161 cgatcgcctc accgagctgc tgagcctctg ccatgacgac ccggaccttt tcaacggcgc
     2221 gatcctgggc cgcaagccct actggcgtcg ccagcgggag atcgccgaat ccgtggtcaa
     2281 gtaccgggtc acttccgcat atacgggcaa cgcggtgggc aaggactacc tggtcggggg
     2341 cctcatcccg tggtggctct acacccggca ccgcagcctc gtcatcgtca cgggcccggg
     2401 gcatacggtc ctcggcagcg tcacatggaa ggagctgcgc cgggccgtcg agggcgacga
     2461 gtccgacccg ctggcctcgg tcccgctggg ggccacggtc agccagggcg tcacggccag
     2521 cccgctccgc tgcatcgtcc gcggcgactg gggcgcgctg ggatacagca cgaattcgat
     2581 cgagcgggcc agcggccagc acgagcggaa gatcctggtc atcgtggaag agtcgagcgg
     2641 ggtccccgac gagatccggg acgccatcga gtcgttcaag ttcagccggc tgctggccat
     2701 cggcaacccg ctgcgggccc ggggctggtt cgtcgagcac atccggcggg ccgaggagga
     2761 tcggcgcaac ggggtcccgc ccggcctcgc cttcaacgcc atccgggtca gctcgcggga
     2821 gtcgccggac gcccacctgg aggaatcgcc ccgcggcctg gccgacgcca cctggatcgc
     2881 cgccaacgag cgcgtctacg gcaagggatc gctctggtgc aattcccaca tcgacgccat
     2941 cgtccccgcc gaggacgccg cccagctcat cccggaggaa tggctcgact acgcggccaa
     3001 ctgcgagcgc ccgccgttgc ggccgttcga cccggtgtcg aagacccggc gcatcgcctg
     3061 cgacctcggc gagggcgtcg ggcgggactc caccgcgatc ctcgtgcgcg acgacctggg
     3121 cgtgctggag tgggttgccg gcaacaacct cgacctcccg gccgccgcgg aacacatccg
     3181 gaggctcaag gaaaaatggc gcgtccccga
//
LOCUS       DATGJT010000748         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_723280, whole genome shotgun sequence.
ACCESSION   DATGJT010000748 DATGJT010000000
VERSION     DATGJT010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723280"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VKX24_13050"
     CDS             complement(<1..842)
                     /locus_tag="VKX24_13050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018522394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HLJ09457.1"
                     /translation="MQMISYEQIGAVGWLRLNRPERLNAMTVEMWEELAKLGESLGDD
                     PTLRCLVVMGEGRAFSSGIDVEHLLSGGGGGLFSEAGKGHAAAAAANAENPSSGRGME
                     DKLVTRITDIQEAYTWLADAPYPTIAAMRGYALGGGLQLALACDLRIAARGTRLALPE
                     HKYGLLPDLGGTYWLPRIVGPARAKELIFTGEPIEAEEAHRIGLVNRVVDDAELESEA
                     EALAARIAAQPPIAVRGSKRCIDQAGRQAVGEGLRDAAVGQAECIRSADFVEAMKANL
                     EKRPP"
     gene            complement(854..1510)
                     /locus_tag="VKX24_13055"
     CDS             complement(854..1510)
                     /locus_tag="VKX24_13055"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HLJ09458.1"
                     /translation="MTVGGDFEPGDRRADRAVLLAHGAGAGRNAAPLVATAGALAGAG
                     IPSLRFDFPYRAAGRKAPDRPPVLLQAVRDAAADLAARTGLGPDRLVLGGRSMGGRYC
                     SLAVGDAEDPLPALGLLLLGYPLHPAGRPESLRVEHFPRLSVPVLFLSGDRDALAGKA
                     ELEKWAGTIPGPVTFHWLAGADHGYRVPKSLGGPGEAAVMAEVARRSTEWVASLAPRP
                     "
     gene            complement(1507..>2078)
                     /locus_tag="VKX24_13060"
     CDS             complement(1507..>2078)
                     /locus_tag="VKX24_13060"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HLJ09459.1"
                     /translation="GSTGYGRAYTQALCGRWGELDVADVAAGIRHAGASGWCDPGRVA
                     VDGGSAGGFTLLLLCARFPGLVRAAVDRYGVADLFDLAETTHRYESRYLDKVVGPLPA
                     AAALYRERSPVTHAARITVPLLVLQGDRDKTVPKAQADAVVDAVRRAGGTVEYHVYEG
                     EGHGWSKPETVADELERSERFLTRWVLKR"
BASE COUNT          264 a          790 c          772 g          252 t
ORIGIN      
        1 ggcgggcgct tctcgaggtt ggccttcatc gcctcgacga agtccgccga gcggatgcac
       61 tccgcctggc cgacggcggc gtcccgcagc ccttcgccca ccgcctggcg gccggcctgg
      121 tcgatgcagc gcttcgatcc ccgcacggcg atcggcggct gggcggcgat ccgggccgcc
      181 agcgcctcgg cctccgactc gagctcggcg tcgtccacca cccggttcac gaggccgatg
      241 cggtgggcct cctcggcctc gatcggctcg ccggtgaaga tcagctcctt ggcccgggcc
      301 gggccgacga tccggggcag ccagtacgtc ccgccgagat cgggcagcag cccgtacttg
      361 tgctccggca gcgccagcct ggtgccccgg gcggcgatcc gcaggtcgca ggccagcgcc
      421 agctgcagcc ctccgccgag ggcgtagccc cgcatggcgg cgatcgtcgg gtagggagcg
      481 tcggccagcc aggtgtaggc ctcctggatg tcggtgatgc gggtgacgag cttgtcctcc
      541 atcccccggc cggaggacgg gttctcggcg ttggcggcgg ccgccgccgc atggcccttg
      601 cccgcctcgg agaacagccc gccgcccccg cccgacagca gatgttccac gtcgatgccg
      661 ctggagaagg cccggccctc gcccatcacg accaggcaac ggagcgtcgg gtcgtcgccc
      721 agggactcgc cgagcttggc cagctcctcc cacatctcga cggtcatggc gttgagccgc
      781 tcaggccggt tgagccgcag ccagccgacg gccccgatct gctcgtagga gatcatctgc
      841 atggccggcg aggttaaggc cgcggagcca gggacgccac ccattcggtc gagcgcctcg
      901 ccacctcggc catcaccgcc gcctcgcccg gcccgccgag cgatttcggc acccggtagc
      961 cgtggtcggc gccggcgagc cagtggaatg tcactgggcc cggaatcgtc cccgcccact
     1021 tctccagctc cgcctttccg gccagggcgt cgcggtcgcc gctcaggaac aggaccggga
     1081 cggagagccg ggggaagtgc tcgacccgca gcgattccgg ccggccggcc gggtggagcg
     1141 ggtagccgag caggagcagg ccgagcgccg gcaacgggtc ttcggcgtcg cccacggcca
     1201 gcgagcaata gcgtccgccc atcgagcggc cgcccaggac gagccggtcg gggccgagcc
     1261 cggtgcgggc ggcgagatcg gcggcggcgt cgcgcaccgc ctggaggagg acgggcggcc
     1321 ggtcgggggc cttccggccg gcggcccggt aggggaagtc gaagcgcagc gacgggatcc
     1381 cggccccggc cagggccccg gccgtcgcca ccagcggggc ggcgttgcgg ccggcgccgg
     1441 cgccgtgggc caggaggacg gcgcgatccg cccggcggtc gccgggctcg aagtcgcccc
     1501 cgacggtcaa cgcttcagga cccagcgggt caggaaccgc tccgagcgct ccagctcgtc
     1561 ggccacggtc tcgggcttcg accagccgtg gccctcccct tcgtagacgt ggtactcgac
     1621 cgtcccgccg gcccggcgga cggcgtcgac cacggcgtcg gcctgcgcct tcggcacggt
     1681 cttgtcccgg tcgccctgca ggaccagcag cggcacggtg atccgggcgg catgggtgac
     1741 gggcgaacgc tcccggtaca gggcggcggc ggccgggagc ggccccacca ccttgtcgag
     1801 gtagcgggac tcgtaacgat gggtcgtctc ggccaggtcg aagaggtcgg ccacgccgta
     1861 gcggtcgacc gccgcccgca ccaggccggg gaagcgggcg cagagcagca gcagcgtgaa
     1921 gccgccggcg ctgccgccgt cgaccgccac ccggccgggg tcgcaccacc cggaggcgcc
     1981 ggcgtggcgg atcccggcgg cgacgtcggc cacgtcgagc tcgccccacc ggccgcagag
     2041 cgcctgggtg taggcccgcc cgtagcccgt cgaccccc
//
LOCUS       DATGJT010000749         2474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1348076, whole genome shotgun sequence.
ACCESSION   DATGJT010000749 DATGJT010000000
VERSION     DATGJT010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1348076"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VKX24_13065"
     CDS             <1..245
                     /locus_tag="VKX24_13065"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HLJ09460.1"
                     /translation="EHHHHLVCLSCGSVIDVTLPAGSEPAIDTAIRAVADTTGFRPTG
                     HRLDVLGVCSRCDRKREPGAVPGPALEGDEIGPARR"
     gene            479..877
                     /locus_tag="VKX24_13070"
     CDS             479..877
                     /locus_tag="VKX24_13070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019544961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO5389 family protein"
                     /protein_id="HLJ09461.1"
                     /translation="MSLDVSPELLACAEAGDVDQAAFVDCVRTSLPYAWETISLLVAE
                     YAADAVDRPFVDNRVPPPDEQARGQLLRALASDAIRGSLERHFGVTLAFQNCHRVAVF
                     AAGAAGTEAYQRFVSPRAQLLNQSPVLRDC"
     gene            909..1946
                     /locus_tag="VKX24_13075"
     CDS             909..1946
                     /locus_tag="VKX24_13075"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014144920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HLJ09462.1"
                     /translation="MKLGLFLLAGLFPGMTEAEALAGTVETAVAAEQAGLDSVWFAEH
                     HFITYGVCPSAVTLASNVLGRTNRITVGTGVCMLSNRHPVALAEETALLDHLSGGRFH
                     LGVGRGGPWVDLEVFGTGLARFEDGFAESLDLLVGGLDEGRVATGPDHRFFRFRPVPL
                     VPRPFTRPRPPIVVAATSRPTVEIAAARGLPLLLGLHATVGERCELLAHYAKVTAEYG
                     HDPGAVEHLGTAVCHIADSRAEAEAELRSAMPEWIRRGVGGYVSISPVPRHGGDAQAY
                     VERLLAIHRVGTPEDCVDHLQATAEATGIRLVLLMVEGTGNQERTRETVARLGTEVAL
                     RLRPGTGGDAG"
     gene            1988..>2474
                     /locus_tag="VKX24_13080"
     CDS             1988..>2474
                     /locus_tag="VKX24_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020645748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HLJ09463.1"
                     /translation="MAAAGSTLVEDSTLDPATRRRWPTLELLAAAAVAALLLRPMLVR
                     AFAGPAAQTWATMFVSLTVQALPFLVLGVLVSGAIAAFVPAGSLARVLPRRSAVAVPV
                     ASLAGMLIPGCECSSVPVAGRLVARGAPAPAALAFMLAAPALNPVVIVATAVAFPGQP
                     AV"
BASE COUNT          323 a          908 c          865 g          378 t
ORIGIN      
        1 gggagcacca ccatcacctg gtctgtctct cgtgcggttc ggtgatcgac gtcacgctcc
       61 cggccggttc cgaaccggcg atcgacaccg caatccgagc ggtcgccgac accaccggtt
      121 ttcggcccac cggtcaccgc ctggacgtgc tcggtgtgtg ctcacgttgt gaccgcaaga
      181 gagagcccgg cgccgtcccc gggccggccc tggaagggga cgaaatcggg ccggcccgga
      241 ggtaggcgtc cagcctcgac agggtgggat cgccgctccg gacataggag gacaaccgac
      301 tgcgaacccg tgccctgcgc cgtcgagccg tcggcagtct agtgagaatc tttcttataa
      361 tgtaagggaa cattccctat tgaatctgtg cgaaacgcaa ccgttagcgc ttgacacagt
      421 aggaacggaa accaaaactg agcgctccga cgacctgtca atgggagagg agccgctcgt
      481 gtcgctcgat gtcagcccgg aactgttggc ctgcgccgag gcaggggacg tcgaccaggc
      541 ggcgttcgtc gactgcgtcc gaacgtcgct gccctacgcc tgggagacga tcagcctgct
      601 ggtggccgag tacgccgccg acgccgtgga ccggccgttt gtcgacaacc gggtcccgcc
      661 gccggacgag caggcgcggg gtcagctgtt gcgggccctg gccagcgacg ccatccgcgg
      721 ctcgctggaa cgccacttcg gcgtgacact ggccttccag aactgtcacc gggtggcggt
      781 gttcgccgcc ggggcggccg gcaccgaggc ctaccagcgg ttcgtctcgc cccgggcgca
      841 gctgttgaac cagtcgccgg tcctgcggga ctgctgacgc cgctcagccg gctcgcggac
      901 cgccaacggt gaagctcgga ctgttcctgc tggccgggct gttccccggc atgaccgagg
      961 ccgaggcgct ggccgggacc gtcgagaccg ccgtcgccgc cgagcaggcc gggctggaca
     1021 gcgtctggtt cgccgaacac cacttcatca cctacggggt ctgcccgtcg gccgtgacgc
     1081 tggcgagcaa cgtgctcggc cggaccaacc ggatcaccgt cgggaccggc gtgtgcatgc
     1141 tgtccaaccg ccacccggtc gcgctggccg aggagaccgc cctgctcgat cacctgtccg
     1201 gcgggcggtt ccatctcggc gtcggccggg gcggcccctg ggtcgacctc gaggtgttcg
     1261 ggacgggcct ggcccggttc gaagacggct tcgccgagtc gctcgacctg ctcgtgggag
     1321 gactcgacga gggccgggtc gccaccggcc cggaccaccg gttcttccgg ttccgtccgg
     1381 tcccgctcgt tccccggccg ttcacccggc cccgcccgcc gatcgtggtg gcggccacga
     1441 gccggcccac ggtggagatc gccgctgccc ggggccttcc cctcctcctc ggcctgcatg
     1501 ccaccgtggg cgagcggtgc gagctgctgg cccactacgc caaggtcacc gccgagtacg
     1561 gccacgaccc cggagcggtc gagcacctcg gcacggccgt ctgccacatc gccgactccc
     1621 gggcggaggc cgaggccgag ctgcggagcg ccatgccgga atggatccgc cgcggcgtcg
     1681 gcggctacgt gtcgatctcg cccgttcccc ggcacggcgg cgatgctcag gcgtacgtcg
     1741 agcggctcct cgccatccac cgggtgggaa ctcccgagga ctgcgtcgac caccttcagg
     1801 ccaccgccga agcgaccggg atccgcctgg tgctgctcat ggtcgaaggg accgggaacc
     1861 aggagcggac ccgggagacc gtggcccggc tgggaaccga ggtcgcactc cggcttcggc
     1921 cgggaaccgg cggggacgcc ggatgatttc ccatcggcga acgggcccgt cgtctaccgt
     1981 cggcgcagtg gctgccgcgg gttccaccct cgtcgaagac tcgacgctcg acccggccac
     2041 gcggcgacgc tggccgaccc tcgaactgct ggccgccgcc gccgtagcgg cgctgctgct
     2101 ccggccgatg ctggtacggg ccttcgccgg tccggcggcc cagacgtggg ccacgatgtt
     2161 cgtctcgctc acggtgcagg cgctgccctt ccttgtgctc ggcgtcctcg tcagcggggc
     2221 catcgccgcc ttcgtcccgg ccggatcgct ggcccgggtc ctgccccgcc gctccgccgt
     2281 ggcggtgccg gtggccagcc tggccggcat gctgatcccg gggtgcgaat gcagctcggt
     2341 ccccgtggcg ggacggctcg tggcccgagg cgcgccggcc cccgccgcgc tggctttcat
     2401 gctggcggcg ccggcgctca acccggtggt catcgtggcc accgccgttg ccttccctgg
     2461 ccagccggcc gtgg
//
LOCUS       DATGJT010000750         7264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_511806, whole genome shotgun sequence.
ACCESSION   DATGJT010000750 DATGJT010000000
VERSION     DATGJT010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 7264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7264
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511806"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VKX24_13085"
     CDS             <1..373
                     /locus_tag="VKX24_13085"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLJ09464.1"
                     /translation="VARQVEAALAGGPHAGDPRWPACALLHDIGKLASGLGVLNRVVA
                     TLAERATGGALSDWEDHRGLRRRIALYVRHPEIGADMIRMAGGRSEVAHWAGAHHDRA
                     RLDPLLMPAPVVSALVAADND"
     gene            841..1635
                     /locus_tag="VKX24_13090"
     CDS             841..1635
                     /locus_tag="VKX24_13090"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HLJ09465.1"
                     /translation="MPYEVHTPVFEGDLELLTQLVSRQELDVFGLCLASLVEAFLAEA
                     KAAVAAGTESFDLDTSTEFLLLAATLVELKTRYLLVEDDDDVPDELPTPEDRDLLLAR
                     LLQGRTFKEAAGVLAALIRAADRCAPRRMGPEEPLASVDVDPLESVSAEQLRAALFQA
                     LAPRPVVDLYHVTPIRASVSDAIDRVLGALTRCEQLSLFDLNTEEPADRLEYIVRFLA
                     VLELFKRGLVEIEQVDAFGDLVVRAAPPEEPTPDEVAAAWEEPALP"
     gene            1632..2447
                     /gene="scpB"
                     /locus_tag="VKX24_13095"
     CDS             1632..2447
                     /gene="scpB"
                     /locus_tag="VKX24_13095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HLJ09466.1"
                     /translation="MTPDDARDDDDWEYPAPEGPLTAEQPEEPPEARQPAPPPQPIPP
                     EAPREPDEWRRAIEAVLMAATEPVEPQVLAQLIERPVAEVEGLCALLAAEFTGRGFVL
                     VKVAGGYRFQTHPDCAPYVERYLLEGRHARLSGAALETLAVIAYKQPVTRSQLSAVRG
                     VDVDGVVRSLLDRGYIEEVGRTDGVGHPVQYGTTRLFLERLGLESLEKLPALADLVPD
                     PGVMEELEARLAETSRAGVRFDPVRRRRPAAARPGEGQATLGDIDPAWDAPAD"
     gene            2444..3211
                     /locus_tag="VKX24_13100"
     CDS             2444..3211
                     /locus_tag="VKX24_13100"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011195911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HLJ09467.1"
                     /translation="MTDPGDAGERLQKVLARAGFGSRRACEILIDAGRVEVNGEVAGL
                     GRRIDAERDTVTVDGVTIAVRSGLVYYLLNKPARVVTTAHDPEGRPTVMDLVPAEPRV
                     FPVGRLDRDTEGLLLLTNDGDLAHGLTHPSRGVPKTYLAEVAGVPGRGALRRLREGVD
                     LEDGRTAPARARVTGTTPQGAALELVIHEGRNRQVRRMCEAVGHPVRRLIRTRFGPLR
                     DHRLAPGQWRPLTQAEIRALYGAIAVKFDDAEGDSEV"
     gene            3378..3872
                     /locus_tag="VKX24_13105"
     CDS             3378..3872
                     /locus_tag="VKX24_13105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09468.1"
                     /translation="MSDCYEESLELRALAMRVAALEDNVAFLEQWCEEQQDALDRAAG
                     PLAYDYELEAPPPPRQILRVVDLRDSAPADGRGDGTRPEPDPSDGDVDVLVAVVETDH
                     DRLVRQIRSRVDQLRRRLGGSGAPPAEPARPEPPEPEARPRPRPGLAPVRRVSAKQAG
                     RTAP"
     gene            complement(3838..4233)
                     /locus_tag="VKX24_13110"
     CDS             complement(3838..4233)
                     /locus_tag="VKX24_13110"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLJ09469.1"
                     /translation="MAIPSKSEQPDGVDWVAVGQYIGEHRRRLGLSKNEASRRARVSN
                     TTWRQIEAGQNDHPTDETLVRMGRALLLDPGDLMRQCQRRYVEAPSVRDLPPLGPPMA
                     LLEVLESDRRLDPRARRVLMELYDLLASR"
     gene            4408..4689
                     /locus_tag="VKX24_13115"
     CDS             4408..4689
                     /locus_tag="VKX24_13115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09470.1"
                     /translation="MAVAVWGVGVGVAVVAGRATSRWARRRCDEALAGALLIPAPPQR
                     SFVLVAGLDDRPQARARARQQRALQQALDTERRGGAFPGPARHSDRSPA"
     gene            4750..5127
                     /gene="aroH"
                     /locus_tag="VKX24_13120"
     CDS             4750..5127
                     /gene="aroH"
                     /locus_tag="VKX24_13120"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013152028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004106 - chorismate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HLJ09471.1"
                     /translation="MTAREPRLLALRGAITLDADTRDEVSEKTQRLVKEMLARNDVHH
                     DDLVSIIFTATDDVRSEFPAAAARALGLGDVPLLCARELGIAHGMPLCVRVMMHLYSD
                     RRRDEMHHVYLEGARGLRDDLPE"
     gene            5134..6219
                     /locus_tag="VKX24_13125"
     CDS             5134..6219
                     /locus_tag="VKX24_13125"
                     /inference="COORDINATES: protein motif:HMM:NF014234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HLJ09472.1"
                     /translation="MRTVAVVGTGLIGGSLALALRRGGLRVQGYDADAGRLARAVERG
                     AIDEAAPSLADVYAGADVAFVAVTVSGVAEAVAAALDAGLGAVSDVGSVKAPVVRAVE
                     ARAGAAASRFVGGHPMAGSAGEEGIEGADADLFLGAAWVLTPTADTDPAAFTAVHDLV
                     ALTGAKIMAVEPELHDELVAIVSHLPHLAASAVMHLAADDDANHDTLLRLAAGSFRAL
                     TRVSGRSAGIWPDICVENQAAILHILDRYMKELERVRELVVAAERAPLLDFFEIARAE
                     VSNLPERSAGAGPLVELSMPVPDRPGVLAEVTTLAGRRGVNIVDLDISHGPTGGVLLM
                     VVPAAGADAIVAGLDELGYHTARRELP"
     gene            6216..>7264
                     /locus_tag="VKX24_13130"
     CDS             6216..>7264
                     /locus_tag="VKX24_13130"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HLJ09473.1"
                     /translation="MTAVDGPGALPAELTLVGPRPLRGRIRVPGDKSISHRALLFSAL
                     AAGTSRLWGLADGDDVARSRAAIEALGVRVRDGAGNQAEAVVAGERADPVVIVRGTGF
                     DGLVEPEAVLDCGNSGTSIRLLAGLLAGRPFHSVLTGDSSIARRPMARVVDPLRAMGA
                     RIDGRDGGRLAPLAIRGGGLTGVRHDLAVASAQVKTALLLAGLQADGVTEVFEPARSR
                     DHTERLLAAMGAGLEALPGGGVRVERAGGLLTPINLAVPGDPSAAVFFVVGACVTPGS
                     DLVVEDVCLNPTRIGFVDVLRRMGADVEIAVKEERGGEPVGDIRAAAGPLRATAMAGD
                     EIPRVIDEIPALAVAA"
BASE COUNT          923 a         2692 c         2644 g         1005 t
ORIGIN      
        1 ggtggcccgc caggtcgagg ccgccctggc cggcgggccc catgccggcg acccccgctg
       61 gccggcctgt gccctcctcc acgacatcgg caagctggcc tccgggctcg gcgtcctcaa
      121 ccgggtggtg gccacgctgg ccgaacgggc cacgggcgga gccctctccg actgggagga
      181 tcaccggggg ctgcggcggc ggatcgccct ctacgtccgc caccccgaga tcggggccga
      241 catgatccgg atggccggcg gccggtccga ggtcgcccac tgggccggcg cccaccacga
      301 ccgggcccgc ctcgacccgc tgctgatgcc cgccccggtg gtctcggccc tcgtggcggc
      361 cgacaacgac taggcggctt ccctggctcc cccggcagac gcaggttcgt cacagaccgg
      421 cgaaagtgtc atggatctgc aacatgatcg ccgcgccgtc gtcaggtgcc gctggcatca
      481 tgatcttcgt gaacgggaca tggtcagcag gcgcaagctg ggggaccaca gcccgttccg
      541 catccggatc ctttcttctc cactggtcct gcgtcggacg acggcgccac tgccgcctga
      601 ggaacccgca cccggtaccg ctgccggata gggcgagacg ggcagcgtcg ctcggcgcaa
      661 gctgcacaac caacaaggcc tccgtggccg gtttcaacac cgagaccggc ctccgccacc
      721 ggaggtagtc aggcccctgc tgcagccgct gcgaggatcg ggcaggcgag gttgaccgcg
      781 agcaacctcc ctgcccgatc gtcgcgtccg gggaccgtgc gggagtagcc ttcccgggca
      841 atgccgtacg aggtccacac gcccgttttc gagggcgacc tcgagctgct gacccagctc
      901 gtctcccgcc aggagctcga cgtgttcggg ctgtgcctgg cctcgctcgt ggaggccttc
      961 ctggccgagg cgaaggcggc ggtggcggcg ggcaccgagt cgttcgacct cgacacgtcg
     1021 accgagttcc tgctcctggc ggcgacgctg gtcgagctca agacccggta cctgttggtc
     1081 gaggacgacg acgacgtacc cgacgagctc cccaccccgg aggaccgcga cctcctgctg
     1141 gcccgcctcc tccagggccg cacgttcaag gaggccgccg gggtgctggc cgccctgatc
     1201 cgggccgccg accgctgcgc gccgcgccgg atggggcccg aggagccact ggcgtccgtc
     1261 gacgtcgacc cgctggagtc ggtgagcgcg gagcagctgc gggcggcgct gttccaggcg
     1321 ctcgcccccc ggccggtcgt cgacctctac cacgtgaccc cgatccgggc cagcgtcagc
     1381 gacgccatcg accgggtcct cggggcgctc acccggtgcg agcagctgtc gctgttcgac
     1441 ctcaacaccg aggagccggc cgaccggctg gagtacatcg tccgcttcct ggcggtgctg
     1501 gagctgttca agcgggggct ggtggagatc gagcaggtcg acgccttcgg cgacctcgtc
     1561 gtccgggccg ccccgcccga ggagccgacc cccgacgagg tggcggcggc ctgggaggag
     1621 ccagcgctcc cgtgaccccg gacgacgccc gggacgacga cgactgggag taccccgcac
     1681 ccgagggtcc cctcaccgcc gagcaaccgg aggagccccc cgaggcccga cagcccgccc
     1741 cgcccccaca gcccatcccg ccggaggccc cccgggagcc cgacgaatgg cgccgggcca
     1801 tcgaggccgt cctcatggcc gccaccgagc ccgtggagcc ccaggtgctg gcccagctca
     1861 tcgagcggcc ggtggccgag gtcgagggcc tctgcgccct gctggccgcc gagttcaccg
     1921 ggcggggctt cgtcctggtc aaggtggccg gcggctaccg gttccagacg catcccgact
     1981 gtgcccccta cgtggagcgc tacctcctgg agggccgcca cgcccgcctg tcgggcgccg
     2041 ccctcgagac gctggccgtc atcgcctaca agcagccggt gacccgctcc cagctctcgg
     2101 ccgtgcgggg cgtcgacgtc gacggcgtcg tccgcagcct gctcgaccgg ggctacatcg
     2161 aagaggtcgg ccggacggac ggcgtcgggc accccgtcca gtacggcacg acccggctgt
     2221 tcctcgaacg gctcggcctc gagtcgctgg agaagctccc ggccctggcc gacctggttc
     2281 ccgatcccgg cgtcatggag gagctcgagg cccggttggc cgagacgagc cgggccgggg
     2341 tgcgcttcga tcccgtccgg cggcgccgcc ccgcggccgc ccggcccggt gagggccagg
     2401 cgaccttggg cgacatcgac cccgcctggg acgccccggc cgattgaccg accccggcga
     2461 cgccggcgag cggctccaga aggtcctggc ccgggcgggg ttcggctccc ggcgggcctg
     2521 cgagatcctc atcgacgcgg gccgggtcga ggtcaacggc gaggtggccg gcctcggccg
     2581 gcggatcgac gccgagcgcg acacggtcac cgtcgacggc gtcaccatcg ccgtccggtc
     2641 cgggctcgtc tactacctgc tcaacaagcc ggcccgggtc gtcaccaccg cacacgaccc
     2701 cgagggccgg ccgaccgtca tggatctcgt tccggcggag ccccgggtgt ttccggtcgg
     2761 ccggctggac cgcgacaccg agggtctgct cctcctgacc aacgacggcg acctcgccca
     2821 cggcctgacc caccccagcc gcggggtccc gaagacctac ctggcggaag tggcgggggt
     2881 ccccggccgg ggggcactcc ggcggctccg ggagggcgtc gacctcgagg acggccgcac
     2941 cgcccccgcc cgggcccggg tcaccgggac gacgccccag ggcgcggcgc tcgagctcgt
     3001 gatccacgag ggccggaacc ggcaggtccg gcggatgtgc gaggcggtcg gccatcccgt
     3061 ccgccgcctg atccggacgc gcttcgggcc cctgcgggat caccgcctcg ccccgggcca
     3121 atggcgtccg ctgacgcagg cagaaattcg ggcactctac ggtgcgatcg cagtgaaatt
     3181 cgacgatgcc gaaggtgaca gtgaggtttg agaattcgtt tgtggcacac gagtgtggcc
     3241 gatgtgcaaa tctcaatgtt ttgttggtaa ttcggtttct gcttctcctt atcgggtcag
     3301 ttgtttttgg gttgacagag gcagaagctg gataaagagt gtggttgggg cactgttcgc
     3361 cggacggaca ggcggggatg agcgactgct acgaggaaag tcttgaactg agagcactgg
     3421 cgatgcgggt agccgcgctc gaggacaatg ttgccttcct cgagcaatgg tgcgaggagc
     3481 agcaggacgc cctcgaccgg gcggcgggcc cgctggccta cgactacgag ctcgaggcgc
     3541 ccccgccccc gcggcagatc ctccgggtcg tcgatctccg cgacagcgcc cccgccgacg
     3601 ggaggggtga cggcacccgg cccgagcccg atccgtccga cggcgacgtc gacgtcctgg
     3661 tggcggtcgt cgagacggac cacgaccggc tggtccgcca gatccggtcc cgggtcgatc
     3721 agctccgccg ccggctcggc gggtcagggg cgccgccggc cgagccggcc cgcccggagc
     3781 cgccggaacc ggaggcccgc ccccgcccgc gaccggggct ggcccccgtc cgccgggtca
     3841 gcgcgaagca agcaggtcgt acagctccat gaggacgcgc cgggcccggg gatccaggcg
     3901 ccggtccgac tccagcacct ccagcagggc catcggcggc ccgagcggcg gcaggtcgcg
     3961 caccgagggc gcctcgacgt agcgtctctg gcactggcgc atgagatcgc cggggtcgag
     4021 caggagcgcc cgccccatcc ggacgagcgt ctcatcggtc gggtggtcgt tctgccccgc
     4081 ctcgatctgg cgccaggtgg tgttggagac ccgggcccgg cgcgacgcct cgttcttcga
     4141 cagcccgagc cgccgtcggt gctcgccgat gtactgcccg accgccaccc agtcgacccc
     4201 gtccggctgc tcgctcttcg acggtatggc cacgatccgt cctgccttcc ctcacgaaca
     4261 tgcgctctgc gtgtcgatct tgctcgaaag taggtccttc tacaagcatt cccgcacagt
     4321 tcgccgagcc tgacgccgct ttgcctcgtt tgccatgatt tctacgaagt tcttgtcaat
     4381 gcggcgccaa ttgcgtatca ttgtggtgtg gcagtggcgg tgtggggagt tggtgtggga
     4441 gtcgcagttg tcgccggacg ggcgacgagc cgctgggcgc ggcgccgctg cgacgaggcg
     4501 ctggccggcg ccctcctgat cccggctccc ccgcagcggt cgttcgtgct cgtcgccggg
     4561 ctcgacgacc gcccgcaggc tcgagcgcgg gcgcgtcagc agcgcgccct ccagcaggcg
     4621 ctcgatacag aacggcgggg tggcgcgttc cctggcccgg cgcgccactc cgaccgttcc
     4681 cccgcctagc gtccggaccg ccgggcccac tgcccggccc ggcgggctct tcgcatacgc
     4741 ttcggatcca tgacggcacg ggagccccgg ctgctcgccc tgcggggggc gatcaccctc
     4801 gacgccgaca cccgggacga ggtttcggag aagacgcagc ggctggtgaa ggagatgctg
     4861 gcccggaacg acgtccacca cgacgacctc gtgagcatca tcttcaccgc cacggatgac
     4921 gtccggagcg agttcccggc cgccgccgcc cgggccctcg ggctcggcga cgtgccgctg
     4981 ctgtgcgccc gggagctcgg catcgcccac ggcatgccgc tgtgcgtccg ggtgatgatg
     5041 cacctctaca gcgaccgccg gcgcgacgag atgcaccacg tctacctgga aggcgcccgc
     5101 ggcctgcggg acgacctccc cgaatagcca tagatgagga ccgtcgccgt cgtcggcacc
     5161 ggcctgatcg gcgggtcgct cgctctcgcc ctccgtcggg ggggcctgcg ggtgcagggc
     5221 tacgacgccg acgccgggcg gttggcccgg gcggtcgagc ggggcgcgat cgacgaagcg
     5281 gccccctcgc tggccgacgt ctatgccggg gccgacgtcg ccttcgtcgc cgtcaccgtg
     5341 tccggggtgg ccgaggccgt ggccgccgcg ctcgacgccg ggctcggcgc ggtctccgac
     5401 gtcgggtcgg tcaaggcgcc cgtcgtccgg gccgtcgagg cccgggcggg tgcggcggcg
     5461 tcgcgattcg tcggcggcca cccgatggcc ggttccgccg gggaggaggg gatcgagggc
     5521 gccgacgccg acctgttcct cggcgccgcc tgggtcctca ccccgacggc cgacaccgat
     5581 cccgccgcct tcaccgccgt gcacgacctc gtggccctga cgggggccaa gatcatggcc
     5641 gtcgagccgg agctgcacga cgagctcgtg gcgatcgtca gccacctgcc gcacctggcg
     5701 gcgagtgccg tcatgcacct ggcggccgac gacgacgcca accacgacac gctcctgcgg
     5761 ctggccgccg gcagcttccg ggcgctgacg cgggtgtcgg ggcggtcggc ggggatctgg
     5821 cccgatatct gcgtcgagaa ccaggcggcc atcctgcaca tcctcgatcg ctacatgaag
     5881 gagctggagc gggtgcggga gctcgtcgtg gcggcggagc gggcgcccct gctcgacttc
     5941 ttcgagatcg cccgggccga ggtctcgaac ctccccgagc gctcggccgg tgccgggccg
     6001 ctggtggagc tgtcgatgcc ggtgccggac cggcccggcg tcctggccga ggtcacgacc
     6061 ctggccggcc ggcgcggcgt caacatcgtc gacctcgaca tcagccacgg cccgaccggc
     6121 ggcgtcctgc tcatggtggt gccggccgcc ggggccgacg ccatcgtcgc cggcctcgac
     6181 gagctgggat accacaccgc ccgtcgggag cttccgtgac cgctgtcgac ggcccgggcg
     6241 ccctgccggc ggagctgacg ctggtcggac cccggccctt gcggggccgg atacgggtgc
     6301 cgggcgacaa gtcgatctcg caccgggcgc tgctcttctc cgccctggcg gcgggcacga
     6361 gccggctgtg gggactggcc gacggcgacg acgtcgcccg gagccgggcg gccatcgagg
     6421 cgctcggggt gcgggtccgc gacggggcgg gcaaccaggc cgaggccgtg gttgccggcg
     6481 agcgggccga ccccgtcgtg atcgtccggg ggacgggctt cgacggcctg gtcgagccgg
     6541 aggccgtcct cgactgcggc aactccggca cgtcgatccg cctgctggcc gggctcctcg
     6601 ccgggcgccc gttccactcg gtgctgaccg gcgacagctc catcgcccgg cggccgatgg
     6661 cccgggtcgt cgacccgctt cgggccatgg gcgcccggat cgacggacgg gacggcggcc
     6721 ggctcgcccc gttggcgatc cggggcggcg ggctcaccgg ggtgcggcac gatctggccg
     6781 tggccagcgc ccaggtgaag acggcgctgc tgctcgccgg cctccaggcc gacggcgtca
     6841 ccgaggtgtt cgagccggcc cggtcccggg accacacgga gcgcctcctg gcggccatgg
     6901 gagcggggct cgaggcactc cccggcggcg gcgtgcgggt ggagcgggcc ggtgggctgc
     6961 tcacgccgat caacctggcc gtcccggggg acccgtcggc ggccgtcttc ttcgtggtcg
     7021 gcgcctgcgt cacccccggc tccgacctcg tggtggagga cgtctgcctc aacccgaccc
     7081 gcatcggctt cgtcgacgtg ctgcggcgga tgggcgccga cgtcgagatc gccgtcaagg
     7141 aggagcgggg cggcgagccg gtgggcgaca tccgggcggc ggccgggccg ctgcgggcca
     7201 cggcgatggc cggcgacgag atcccccggg tgatcgacga gatccccgcc ctggcggtgg
     7261 cggc
//
LOCUS       DATGJT010000751         3420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1239002, whole genome shotgun sequence.
ACCESSION   DATGJT010000751 DATGJT010000000
VERSION     DATGJT010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239002"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..625)
                     /locus_tag="VKX24_13135"
     CDS             complement(<1..625)
                     /locus_tag="VKX24_13135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007298750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09474.1"
                     /translation="MSPARNRVTPTGEIVAIPLRGAWTGNRGILHRGRDIVRFHAGDL
                     WITCALEFKGRRQRQWQPHHYTFLFFHDEAVSLAAGHRPCGECRRPAYQAYRAAWAAG
                     LGGDPPSAGEMNRRLHGERIVAGAHRRRFHELPWGDLPDGAFVLLGDVAAVVVGDRLV
                     EWTHQGYAADRGRRRPRRGVATVITPPATVAALEAAAPIHVDGVRRHL"
     gene            657..1046
                     /locus_tag="VKX24_13140"
     CDS             657..1046
                     /locus_tag="VKX24_13140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005935387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HLJ09475.1"
                     /translation="MGRSRPVRVARVYDPPGDDDGARVLVDRLWPRGLRKDAAALDHW
                     CREVAPSTELRKWYGHDPARFAEFAERYRSELDDPEHAAALTALRRLTGKGPLTLLTA
                     TKEPDLSQARVLADVLTGARKRPVRRS"
     gene            complement(1104..1352)
                     /locus_tag="VKX24_13145"
     CDS             complement(1104..1352)
                     /locus_tag="VKX24_13145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09476.1"
                     /translation="MPATPVPRPAWLKITAPLAIVGVVVWPVLAMLGLLGDVPAQAVL
                     NVGIVTAVLAYISIRRIKADRAAGGAAPRPDPPEPPRR"
     gene            complement(1404..1658)
                     /locus_tag="VKX24_13150"
     CDS             complement(1404..1658)
                     /locus_tag="VKX24_13150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09477.1"
                     /translation="MTATFKDRIFGTGDGVRVRCEFDDWTFSPRYTDGVCPLCGWRPD
                     GVVEQTPLVQRMDWFMVMLAVVVVASIIMAVLVLHAWAQA"
     gene            complement(1655..3289)
                     /locus_tag="VKX24_13155"
     CDS             complement(1655..3289)
                     /locus_tag="VKX24_13155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09478.1"
                     /translation="MTVSPLGRRRAVQAGVAALLVAPTFLLVAAGRGRADSPLGNYNG
                     TVSSTAVHVQAGSSAFPNFNTGAVDNHFPLASAHLDSSPNAEAFSSPLDTGPLGQTIA
                     GAGHQNQPQYADVRCPPQCDGKPVTVGSEPGPSSSSTASDRKALATGQAGGVTAGGGA
                     PAPPAPPAPPGKTDGVVPVAAPAAPSPTPWLLDQGQAAALRTALSAWRARYLTADDAR
                     RYPMPAADTPDGVAGDTARSESRLDGSTLVLDGMSAAGRVVLGGGAVVLRDVSVHVNV
                     TNDGTPKKTVSVDVGSALVGGTPVTIGPDGVSVNGQAVPGIGAAGAQASAALNQALGQ
                     AGFEIRSLAPSQQATDHQLTLDAVGVLIRLAPKSPAPGVPAQFTTLAVGEVFADSLAV
                     PGEGGDLGDGLGGDLGSGDTGTVPPATSASAPDNGAAGAPEASSAYGESTSGIPSGAA
                     DVGSASSGSSGSFGSSSFGSSGSSGSSGAALGSSGSSAPATSATGGSSHLAAPAAARR
                     VLQPEKPTKLLLLYLLWQSLVIGTVASLYLWRKAAA"
BASE COUNT          436 a         1297 c         1286 g          401 t
ORIGIN      
        1 acagatggcg ccggacgccg tccacgtgga tcggcgccgc cgcctccagg gcggccaccg
       61 tcgccggcgg ggtgatcacc gtggcgacgc cccgccgggg ccgtcgccgg ccgcggtcgg
      121 cggcgtagcc ctgatgcgtc cactcgacga gacggtctcc gaccaccacc gccgcgacgt
      181 caccgaggag cacgaacgcg ccgtcgggga ggtcgcccca cggcagctcg tggaaccgcc
      241 ggcggtgcgc cccggcgacg atccgctcgc cgtgcagccg ccggttcatc tctccggcgg
      301 acggggggtc gccgccgagc ccggcggccc aggccgcccg gtaggcctgg taggccgggc
      361 ggcggcattc gccgcagggc cggtgtccgg cggccagcga caccgcctcg tcgtggaaga
      421 acaggaacgt gtagtgatgc ggctgccact gccgctgccg ccggcccttg aactccaggg
      481 cgcaggtgat ccacaggtcg ccggcgtgga agcggacgat gtcccgcccc cggtgcagga
      541 tcccccggtt gccggtccac gccccccgca gcgggatggc cacgatctcc ccggtgggcg
      601 tgacacggtt gcgggcggga ctcatggcag tcgtctccgg cgggcaagat agtcccgtgg
      661 gacgctcccg ccccgtccgt gtggcccggg tctacgaccc gcccggcgac gacgacggcg
      721 cccgcgtcct cgtcgaccgc ctctggcccc ggggtctccg caaggacgcc gcggccctcg
      781 accactggtg ccgcgaggtc gccccctcca ccgagctccg caagtggtac ggccacgacc
      841 ccgcccgctt cgccgagttc gccgagcgct accgctcaga gctcgacgat cccgagcatg
      901 ccgccgccct gactgccctg cgccgcctca ccgggaaggg cccgctgacg ctcctgaccg
      961 ccaccaagga gcccgacctc agccaggccc gggtcctcgc cgacgtcctc accggggccc
     1021 gaaagcggcc ggtgcgcagg agttagctgg tgtttaaccg gaatatgtgc ggctaagcac
     1081 gggtcatcgc gagaatcgag cggctagcgc cggggcggct ccggtgggtc gggccggggg
     1141 gcggcgccac ccgccgcccg gtcggccttg atccggcgga tcgagatgta ggccaggacc
     1201 gcggtcacga tcccgacgtt gagcacggcc tgggccggga cgtcgccgag gaggccgagc
     1261 atggccagca ccggccacac cacgacgccg acgatggcca gcggagcggt gatcttcagc
     1321 caggccggcc gggggacggg tgtcgccggc atcggcgccc gcgccgctcg cctcgccgct
     1381 ggtgtccggg gcccggaccg gcctcaggcc tgggcccagg cgtggagaac gaggacggcc
     1441 atgatgatcg aggcgacgac gaccacggcc agcatcacca tgaaccagtc catccgctgg
     1501 acgagcggcg tctgctcgac gaccccgtcc ggccgccagc cgcacagcgg gcacaccccg
     1561 tcggtgtagc gcggggagaa cgtccagtcg tcgaattcgc agcggacccg gacgccgtcg
     1621 ccggtcccga agatgcggtc cttgaacgtc gccgtcatgc cgccgccttc cgccacaggt
     1681 acaggctggc caccgtgccg atcaccagcg actgccacag caggtagagc agcagcagct
     1741 tcgtgggctt ctccggttgc aggaccctcc gggcggccgc cggggcggcc aggtggctcg
     1801 agccgccggt cgccgacgtc gccggcgccg acgagccgct tgacccgagc gccgcacccg
     1861 acgagccgga cgagcccgac gagccgaacg acgacgaccc gaacgacccc gacgagccgg
     1921 aggacgccga gccgacgtcc gccgcgccgg aggggatccc cgacgtgctc tcgccgtagg
     1981 cgctcgacgc ctccggcgcg ccggccgcgc cgttgtcggg cgccgacgcc gacgtcgccg
     2041 gcggcaccgt gccggtgtcg ccgctgccga gatcgccgcc gagcccgtcg ccgaggtcgc
     2101 cgccctcccc gggcaccgcc agggaatcgg cgaagacctc gcccacggcc agcgtcgtga
     2161 actgcgccgg gacgccgggc gccggggact tcggcgccag ccggatgagg acgccgacgg
     2221 cgtcgagggt cagctggtgg tcggtcgcct gctgcgacgg ggccagcgag cggatctcga
     2281 accccgcctg gccgagcgcc tggttgagcg ccgcgctggc ctgggcgccg gcggcgccga
     2341 tgccggggac ggcctggccg ttcaccgaca cgccgtcggg cccgatggtg accggggtgc
     2401 cgcccaccag cgccgaaccg acgtcgaccg acacggtctt cttcggcgtg ccgtcgttgg
     2461 tcacgttgac gtggacgctg acatcgcgca gcaccaccgc cccgccgccg aggacgaccc
     2521 ggccggcggc gctcatgccg tcgagcacca gcgtcgaccc gtcgaggcgg ctctcgctcc
     2581 gggcggtgtc gccggcgacg ccatcgggcg tgtcggccgc gggcatcggg tagcgccggg
     2641 cgtcgtcggc cgtgaggtac cgggcccgcc aggccgacag cgccgtccgc agggcggccg
     2701 cctgtccctg gtcgagcagc catggcgtgg gcgaaggggc ggccggggcg gcgaccggca
     2761 ccaccccgtc ggtcttcccg ggcggagcgg gcggggcggg cggagccggc gcaccgccgc
     2821 cggccgtcac gccgccggcc tggccggtcg ccagggcctt gcggtcggag gccgtcgacg
     2881 acgaggacgg gccgggctcg gacccgacgg tcacgggctt cccgtcgcac tgcggcgggc
     2941 agcggacgtc ggcgtactgc ggctggttct ggtggccggc gccggcgatg gtctggccca
     3001 gcgggccggt gtcgagcggg ctggagaacg cttcggcgtt gggcgagctg tcgaggtggg
     3061 cgctggccag cgggaagtgg ttgtcgacgg ccccggtgtt gaagttgggg aaggcgctgg
     3121 agccggcctg gacgtggacg gccgtcgagc tgaccgtgcc gttgtagttg ccgagcggcg
     3181 agtcggcgcg gccgcggccg gcggccacca gcaggaacgt gggcgccacg agcagggcgg
     3241 ccacgccggc ctggaccgcc cgccgccgac cgagcggcga caccgtcatc gcccgtcccc
     3301 cttccgcttg cgcccctgcg tgtcctccag agcctgccgg atgaactcgt cgacgtcgag
     3361 gccgtcgcgc tccgcccgct cctccaggct ccgcagcaac gccggcggca gcgacacgtt
//
LOCUS       DATGJT010000752         3468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_931088, whole genome shotgun sequence.
ACCESSION   DATGJT010000752 DATGJT010000000
VERSION     DATGJT010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3468
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_931088"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..1245
                     /locus_tag="VKX24_13160"
     CDS             109..1245
                     /locus_tag="VKX24_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020419811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLJ09479.1"
                     /translation="MTEPTSGTGTAGPSGGGGGVVDVVRPHAEVQYAAELAALAAADD
                     RPRPPSWRLSPWAVATYLLGGRLPDGTEITPKYIGQRRLVEVAVATLATDRALLLLGV
                     PGTAKTWVSEHLAAAISGDSTLLVQGTSGTPEEAIRYGWNYARLLAEGPSRSAVVAGP
                     IMRAMERGSLARVEELTRIPSDVQDALITILSEKTLPIPELDDEVQARQGFNVIATAN
                     DRDRGVNELSSALRRRFNTVVLPLPADAEEEVGIVARRVGELGAALGLPAELDALAEI
                     RRVVTVFRELRSGVTADGRTRLKSPTATLSTAEAISVVTNGAALATHFGDGVLRAADV
                     AAGLTGAVVKDPVQDGLVWAEYLETVVRERDGWDDLYRACRELA"
     gene            1251..>3468
                     /locus_tag="VKX24_13165"
     CDS             1251..>3468
                     /locus_tag="VKX24_13165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017982711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5682 family protein"
                     /protein_id="HLJ09480.1"
                     /translation="MPDLHVLGVRHHGPGSARAVGEALAELQPDVVLIEGAPELDAVA
                     ALAGRRDMVPPVAGLVYAVDEPRRSSFYPLADFSPEWVALRWAIVAGRPVRFCDLPAA
                     NALALDEAERRPAGEDPIATLAATAGYDDPERWWEDVIEHRFHGLGIFAVITEAMAAL
                     RHGGAVATDPTNRRSSGGPGRPEERRLEETGGRTESDPYNEQREAAMRRVIRATLREG
                     ADRVAVVCGAWHAPALVPEGFPAASVDTARLKGLPRLKVAATWVPWTSALLARRSGYG
                     AGVDAPGWYRHLATAPDAAPTRFLVKAARLLRDRGHDVSPAATVEAVRLAEGLAALRS
                     RPGPGLGEILDAAEAALAGGSPVPLRLIASELLVGHDLGSVPDDTPMVPLARDLARAQ
                     RRLRLAASAATRTLDLDLRNDTHRRRSQLLHRLRLLGIDWGEPAETGRTGGTFKEVWE
                     LQWHPAFEVALVEASARGTTIDSAATATLTDAAAASADPGDVAALVEEALLAELPGAL
                     ASVTATLAERAAQQRDTVRLMAAVEPLARTRRYGNVRRIDTEVVAPVLSGLLTRVALG
                     LPAAVAAVDDDGAAAVRGLLDSVDRAVGLLDDPALRTPWLAALRAVADQRGVHGLLGG
                     RAVRILLDSGVLDGGDVARRLSRALSLPDEAPRAAAWIEGFLAGDASLLLHDPELLGV
                     LDDWVGAVRGTVFDEVLPVLRRTFASFPAPERRALGSHLRRLEDGGGDPSAGNEETL"
BASE COUNT          392 a         1357 c         1287 g          432 t
ORIGIN      
        1 cgaagcctgg gcggccagcc tgggcggtga gcccggcctg cgccggcggg tccagaccct
       61 cggccacgcc ctcagcctcc gggccgtcat caaccgggag ttccccacat gaccgaaccc
      121 acctccggga ccggcaccgc cgggccgtcc ggcggcggcg gcggcgtcgt cgatgtcgtg
      181 cgcccccacg ccgaggtcca gtacgccgcc gagctcgccg ccctggccgc cgccgacgac
      241 cgcccgcgac cgccgagctg gcggctttcg ccctgggccg tggccaccta cctcctcggg
      301 ggccggctgc ccgacggtac ggagatcacc ccgaagtaca tcgggcagcg ccgcctcgtc
      361 gaggtcgccg tcgccacgct ggccaccgac cgggccctgc tcctcctcgg cgtgcccggc
      421 acggccaaga cctgggtgtc ggagcacctc gccgccgcca tctccggcga ctcgacgctc
      481 ctcgtccagg gcacgtcggg cacgcccgag gaggccatcc gctacggctg gaactacgcc
      541 cggctgctgg ccgagggtcc gtcccggtcg gccgtcgtgg ccggcccgat catgcgggcc
      601 atggagcggg gctcgttggc ccgggtcgag gaactgacgc gcatcccgtc cgacgtgcag
      661 gacgccctca tcacgatcct gtccgaaaag acgctgccga tccccgagct cgacgacgag
      721 gtgcaggccc ggcaggggtt caacgtcatc gccacggcca acgaccggga ccggggcgtg
      781 aacgagctct cgtcggcgct tcgacgccgc ttcaacaccg tcgttttgcc gctgccggcc
      841 gacgccgagg aggaggtcgg catcgtggcc cgccgggtgg gcgagctcgg cgccgccctc
      901 ggcctgccgg cggagctcga cgccttggcc gagatccgcc gggtggtgac ggtgttccgg
      961 gagctgcgct ccggcgtcac cgccgacggg cgcacgaggc tcaagtcgcc gacggccacg
     1021 ctgtcgaccg ccgaggcgat ctcggtggtg accaacggcg ccgccctcgc cacgcatttc
     1081 ggggacgggg tcctgcgggc ggccgacgtc gccgccgggc ttaccggcgc agtggtgaag
     1141 gacccggtgc aggacgggct cgtctgggcc gagtacctcg aaaccgtggt gcgggagcgg
     1201 gacggctggg acgacctcta ccgggcctgc cgggagctgg cctgacgccg atgccggatc
     1261 tccacgtgct cggagtgcgg caccacgggc cgggctcggc ccgggcggtc ggcgaggccc
     1321 tggccgagct gcagcccgac gtcgtgctca tcgagggagc gccggagctc gacgcggtgg
     1381 cggcgctggc cggacggcgc gacatggtgc cgcccgtggc cggcctcgtc tacgccgtcg
     1441 acgagccgcg gcgttcgtcg ttctacccgc tggccgactt ctccccggag tgggtggcgc
     1501 tgcggtgggc gatcgtcgcc ggccgcccgg tgcggttctg cgatctgccc gccgccaacg
     1561 ccctcgccct cgacgaggcc gaacgccggc ccgccggcga ggacccgatc gccacgctgg
     1621 cggccaccgc cggctacgac gaccccgagc gctggtggga ggacgtcatc gagcaccgct
     1681 tccacggcct cgggatcttc gccgtgatca ccgaagcgat ggccgcgctc cgccacggcg
     1741 gcgccgtggc caccgacccc acgaaccggc gttcctcagg gggccctggc cgccctgagg
     1801 aacgccggtt ggaagagacg gggggccgga cggagtcgga cccctacaac gagcagcggg
     1861 aagccgccat gcgcagggtg atccgggcga ccctgcggga gggcgcggac cgcgtcgccg
     1921 tcgtgtgcgg cgcctggcat gcgccggccc ttgtcccaga agggtttccc gccgcctcgg
     1981 tcgacaccgc ccgcttgaag ggcctgcccc gcctcaaggt cgccgccacc tgggtgccgt
     2041 ggacgtcggc gctgctggcc cggcgctccg gctacggcgc cggcgtcgac gcccccggct
     2101 ggtaccggca cctggccacc gcccccgacg ccgccccgac ccgcttcctc gtgaaggcgg
     2161 cccggctgct gcgggaccgg ggccacgacg tgagcccggc cgccaccgtg gaggcggtcc
     2221 gcctggccga ggggctggcc gcgctccggt cccgtcccgg ccctgggctg ggtgagatcc
     2281 tcgacgccgc cgaggcggcg ctggccggcg ggtcgcccgt ccccctgcgg ctcatcgcct
     2341 ccgagctcct cgtcggccac gacctcggct cggtgcccga cgacacgccg atggtgccgc
     2401 tggcccgcga cctggcccgg gcgcagcgcc gcttgcggct cgccgcctcg gcggcgacga
     2461 ggacgctgga cctcgacctc cgcaacgaca cccaccgccg gcgctcgcag ctcctgcacc
     2521 gcttgcggct cctcggcatc gactggggcg agccggcgga gaccggccgc accggcggca
     2581 cgttcaagga ggtgtgggag ctgcagtggc acccggcgtt cgaggtcgcc ctcgtcgagg
     2641 cctcggcccg gggaacgacg atcgactccg ccgccaccgc caccctcacg gacgccgccg
     2701 ccgcctcggc cgaccccggc gacgtcgccg ccctcgtcga ggaggcgctg ctggccgagc
     2761 tgcccggcgc cctcgcctcc gtcaccgcca cgctggccga acgggccgcc cagcagcgcg
     2821 acaccgtccg cctcatggcg gcggtcgagc cgctggcccg gacccggcgc tacggcaacg
     2881 tccggcgcat cgacaccgag gtggtggcgc cggtgctgag cggcctgctc acccgggtgg
     2941 cgctcggcct cccggcggcg gtggcggccg tcgacgacga cggtgcggcg gcggtccgcg
     3001 gcctcctcga ctcggtcgac cgggccgtcg gcctcctcga cgacccggca ctgcggacgc
     3061 cgtggctggc ggcgctgcgg gccgtggccg accagcgcgg cgtccacggc ctgctgggcg
     3121 gacgggcggt gcggatcctc ctcgacagcg gggtcctcga cggcggcgac gtggcccggc
     3181 ggctctcccg ggcgctgtcg ctccccgacg aggcgccccg ggcggcggcc tggatcgagg
     3241 ggttcctggc cggcgacgcc agcctgctgc tccacgatcc ggagctgctc ggagtcctcg
     3301 acgactgggt cggtgcggtg cggggaacgg tgttcgacga agtactgccg gtgctgcggc
     3361 ggacgttcgc ctccttcccg gcgccggagc ggcgggccct cggctcgcac ctgcgccggc
     3421 tggaggacgg cggtggcgac ccgtccgccg ggaacgaaga aaccctcg
//
LOCUS       DATGJT010000753         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_102222, whole genome shotgun sequence.
ACCESSION   DATGJT010000753 DATGJT010000000
VERSION     DATGJT010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102222"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VKX24_13170"
     CDS             complement(<1..470)
                     /locus_tag="VKX24_13170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HLJ09481.1"
                     /translation="MSTAPDLVWQPSLLDAGPEPDVDETFAGAVRIELDGKSWIERVP
                     GWVSGSDALFDHLVRTADWGQRTRRMWDSEVLEPRLTAWWGAESGRPLRPPILERMRR
                     ALSQRYGVEFDSMGLNLYRDGRDSVAWHGDRIAREIAEPLVAIVSIGEPRRFLLR"
     gene            complement(516..1244)
                     /locus_tag="VKX24_13175"
     CDS             complement(516..1244)
                     /locus_tag="VKX24_13175"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020661361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HLJ09482.1"
                     /translation="MIRTEERGRVAVVVIDRHEQRNALDTEHCELLRDALAAAQAGGA
                     RAVVLTGEGSSFCAGADFGEVYGDGFRKALYEMLRRFTASPVPLVAAVNGPAIGAGTQ
                     LALAADLRMVARSAKFAIPTATLGLAVDPWTIRRLALIAGGGTARRVLLACEAVSAEE
                     ALRCGLADAAGDLDAALERAARIAALAPLTLAYSKQVLNRLQEPEIHDPGLDSLFEEV
                     WRSADVAEGRAARQERRPPRFEGR"
     gene            1264..>2297
                     /locus_tag="VKX24_13180"
     CDS             1264..>2297
                     /locus_tag="VKX24_13180"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLJ09483.1"
                     /translation="MERTIPNLLAGAAEAVPDKVWLLHEDDAVTFGEARRRTGAVAAR
                     LVEAGVSPGDLVLVPMRNTTACLFTWLGLMRLGAVLVAANPAATAAELDGLVAQTGPR
                     LVLADADVDRLAAGGGAAGEGGDVGVGARAEEAPPDGAGPGPDDAAVLIPTSGTTGRS
                     KLVTQTQRAFVLAGEGFPSWMELTGDDRLMTSLPLFHINAQAYSVCGSLAARASLVLL
                     PRFSPAGFFDRARRYGATEFNAIGAMLEMLMRQPERPDDADNPVRLVYTGPAPTEARQ
                     LEIERRFGLRIVCGYAQSESPYGTIWPRGTRPYGTLGAIRQHPTLGRINEGRVMREDR
                     PVAPGEVGEL"
BASE COUNT          292 a          887 c          837 g          281 t
ORIGIN      
        1 cggagcagga accggcgcgg ttcgccgatc gacacgatgg ccaccagcgg ctcggcgatc
       61 tcccgggcga tacggtcgcc gtgccaggcg acgctgtccc gcccgtcccg gtagaggttg
      121 aggcccatcg agtcgaactc cacgccgtag cgctgcgaca gcgcccggcg catccgctcc
      181 aggatcggcg gccgcagcgg ccggcccgac tccgcccccc accaagcggt gaggcggggt
      241 tcgaggacct cgctgtccca catcctccgg gtgcgctggc cccagtcggc cgtccgaacg
      301 aggtggtcga agagggcgtc ggaccccgag acccagcccg gcacccgctc gatccacgac
      361 ttcccgtcca gctcgatccg caccgccccg gcgaacgttt cgtcgacgtc gggctcgggg
      421 ccggcgtcga gcagcgaagg ctgccagacg agatcgggcg cggtactcat cgccccggcc
      481 aggctagcgg cgtccgagac cccgccggac gagcgctacc gcccctcgaa gcggggcggg
      541 cggcgctcct ggcgggcggc ccggccctcg gcgacgtcgg cgctgcgcca cacctcctcg
      601 aacagcgagt cgagccccgg gtcgtggatc tccggctcct ggagccggtt gaggacctgc
      661 ttcgaatagg ccagcgtcaa gggagcgagg gcggcgatgc gggcggcccg ctccagggcg
      721 gcgtcgaggt cgccggcggc gtcggcgagg ccgcagcgca gcgcttcctc cgccgagacc
      781 gcttcgcagg ccagcagcac ccggcgggcg gtgccgccgc cggcgatcag cgccagccgg
      841 cggatcgtcc aggggtcgac ggccaggccg agggtggcgg tgggaatggc gaacttggcc
      901 gaccgcgcca ccatccggag atcggcggcc agcgccagct gggtgccggc gccgatcgcc
      961 ggtccgttga cggcggccac gagcgggacg ggcgaggcgg tgaagcggcg cagcatctcg
     1021 tacagcgcct tgcggaagcc gtcgccgtag acctcgccga agtcggcgcc ggcgcagaag
     1081 ctcgatccct cgccggtgag gaccaccgcc cgggcgccgc ccgcctgggc ggcggcgagg
     1141 gcgtcgcgca gcagctcgca gtgctcggtg tcgagggcgt tgcgctgttc gtggcggtcg
     1201 atcaccacga cggcgacccg gccccgttcc tcggttctga tcattcttgg caagctaccc
     1261 gccgtggagc gcacgatccc caacctgctg gctggcgccg ccgaggccgt ccccgacaag
     1321 gtgtggctcc tccacgagga cgacgccgtc accttcggcg aagcccggcg ccgcaccggc
     1381 gccgtggccg cccggctggt cgaggccggt gtctcgccgg gcgacctcgt cctcgtgccg
     1441 atgcgcaaca ccaccgcctg cctcttcacc tggctcggtc tcatgcgcct cggggccgtc
     1501 ctcgtcgccg ccaaccccgc cgccaccgcc gccgagctcg acgggctggt ggcgcagacc
     1561 gggccgcggc tggtgctcgc cgacgccgac gtcgaccggc tcgccgccgg gggcggcgcc
     1621 gccggcgagg gcggcgatgt cggcgtcggc gcccgggccg aggaggcgcc gcccgacggc
     1681 gccgggccgg gcccggacga cgccgccgtc ctcatcccca cctcgggcac gacgggccgc
     1741 tccaagctcg tgacccagac gcagcgggcc ttcgtcctgg ccggcgaagg gttcccgtcg
     1801 tggatggagc tcaccggcga cgaccggctg atgacgtcgc tgccgctgtt ccacatcaac
     1861 gcccaggcct attcggtctg cggctcgctg gccgcccggg cgagcctggt gctcctcccc
     1921 cgcttctcgc cggccggctt cttcgaccgc gcccgccgct acggcgccac cgagttcaac
     1981 gccatcggcg ccatgctgga gatgctcatg cgccagccgg agcggccgga cgacgccgac
     2041 aaccccgtcc ggctggtcta caccggcccg gcgccgacgg aggcccgcca gctggagatc
     2101 gaacgccgct tcggcctgcg gatcgtgtgc ggctacgccc agtcggagtc gccctacggg
     2161 acgatctggc cccggggcac ccggccctac ggcaccctcg gcgccatccg ccagcacccg
     2221 acgctgggcc ggatcaacga gggccgggtc atgcgggagg acaggccggt ggcaccgggc
     2281 gaggtcggcg agctgga
//
LOCUS       DATGJT010000754         2598 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1451773, whole genome shotgun sequence.
ACCESSION   DATGJT010000754 DATGJT010000000
VERSION     DATGJT010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451773"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /gene="uppS"
                     /locus_tag="VKX24_13185"
     CDS             complement(<1..732)
                     /gene="uppS"
                     /locus_tag="VKX24_13185"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HLJ09484.1"
                     /translation="MDAADSGSSQASSAHGDLAAPVRDPAERLGDARIPAHLAVIPDG
                     NRRWALEHGLSPVEGHRRGFEVARRLARFCRRIGIHTVTLWAFSTENWKRSPEEVAAL
                     FALYESWILDLIDEAVEEEVRVLHIGRRQGAPLGMEAAAVRAGFPDGLPDSLLAALDH
                     ILAETCGFDRNVITLALNYGGADELQRAVGRLLDQARATGADPAALLLGDFLDTTGQL
                     HPNPDLVWRTSGEYRSSGFLPLQSAY"
     gene            complement(769..1743)
                     /locus_tag="VKX24_13190"
     CDS             complement(769..1743)
                     /locus_tag="VKX24_13190"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HLJ09485.1"
                     /translation="MEQLSRDEVAIVLDLVSDDLERIEKILTESSAAGTPFLTESATY
                     LARAGGKRLRPALVALSARVWSDCNPDADATAAAIEMTHLATLYHDDVIDESDVRRSV
                     PSANNKWGNTVAILVGDFLFARASSIAADVGGEVPRVLADAIARVVQGQVRELEHLYD
                     VRRPAAHYFATVDDKTGALLEASSRLGAALAGAAPKEADDLRRFGGAFGTAFQIADDL
                     LDLSATQDELGKAPGTDLRDGVYTLPLLYAVEAEPSLAAALGTPEPDIDLIRSAVVRT
                     GAFDRALAVAADYVDQALAALGSAPHGIARESLEALTRLIIDRVPVLE"
     gene            complement(1774..>2598)
                     /gene="ispH"
                     /locus_tag="VKX24_13195"
     CDS             complement(1774..>2598)
                     /gene="ispH"
                     /locus_tag="VKX24_13195"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017541260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HLJ09486.1"
                     /translation="IYVRKQIVHNQAVVERFEAQGVVFVDTEEAVPEGAVCVFSAHGV
                     SPAVHENARRRNLTVVDATCPLVTKVHVEARRFARGGRTIFLVGHTGHEEVEGTAGEA
                     PDRVVLVDGAAAAAAVDAEDPGNVAYLTQTTLGVDETGGIVDILRRRFPAIAGPRKDD
                     ICYASQNRQEAVKALAARSDLVLIVGSDNSSNSNRLLEVSREAGTPAHLISDERAIDP
                     GWLEAAEVVGVSSGASTPEHLVDGVVAHLRGLGFGEVEEVAVAIEDVHFPLPAGIA"
BASE COUNT          387 a          914 c          936 g          361 t
ORIGIN      
        1 gtaggccgac tgcagcggga ggaagccgga ggaccggtac tcgcccgacg tccgccacac
       61 cagatccggg ttcgggtgga gctggcccgt ggtgtccagg aagtcgccca gcagcagtgc
      121 cgccgggtcg gcaccggtcg ccctggcctg atccagcagc cggccgaccg cccgctggag
      181 ctcgtcggcc ccgccgtagt tgagcgccag ggtgatgacg ttgcggtcga agccgcaggt
      241 ctcggccagg atgtggtcga gcgccgccag cagcgaatcg ggcagcccat ccgggaagcc
      301 agcccggacc gccgccgcct ccatcccgag cggggcgccc tgccggcggc cgatgtggag
      361 gacccggacc tcctcctcca cggcctcgtc gatcaggtcg aggatccagg attcgtagag
      421 cgcgaacaag gcggcgacct cctcggggga ccgcttccag ttctcggtcg agaacgccca
      481 cagcgtcacc gtgtggatgc cgatccggcg gcagaaccgg gccagccggc gggcgacctc
      541 gaagccgcgg cggtggcctt caaccggcga gagcccgtgc tccagcgccc agcgccggtt
      601 gccgtccggg atgacggcga ggtgggccgg gatacgggca tcgcccaacc gctcggcggg
      661 gtcccgcacc ggggcagcta ggtcgccgtg cgccgagctg gcttggctcg accccgagtc
      721 ggccgcgtcc accgccttag cgtaggctac cgagcttaag ttcagccttc actcgagaac
      781 gggcacccgg tcgatgatca ggcgggtcag cgcctcgagc gactcacggg cgatcccgtg
      841 cggcgcgctg ccgagcgccg ccaacgcctg gtccacgtag tcggcggcca ccgccagcgc
      901 ccggtcgaag gcccccgtac gtacgaccgc cgagcggatc aggtcgatgt cgggctccgg
      961 cgtcccgagc gccgccgcca acgacggctc ggcctcgacg gcatagagca gtggcagcgt
     1021 gtagaccccg tcgcgcaggt cggtgcccgg cgccttgccg agctcgtcct gggtggccga
     1081 gaggtcgagc aggtcgtcgg cgatctggaa ggcggtcccg aaggcccccc cgaaccggcg
     1141 caggtcgtcg gcctccttcg gagccgcgcc ggccagggcc gccccaagcc gggaggacgc
     1201 ctccagcagc gctccggtct tgtcgtcgac ggtggcgaag tagtgggccg ccgggcggcg
     1261 gacgtcgtag aggtgctcca gctcgcggac ctggccctgc accacccggg cgatcgcatc
     1321 ggcgagcacc cggggcacct ccccgccgac gtcggcggcg atgctggagg cgcgggcgaa
     1381 gaggaagtcg ccgacgagga tcgccaccgt gttgccccac ttgttgttgg cgctcgggac
     1441 gctgcgacgg acgtcggact cgtcgatgac gtcgtcgtgg tacagggtcg ccaggtgggt
     1501 catctcgatc gccgccgcgg tggcgtcggc gtccgggttg cagtccgacc agacccgggc
     1561 cgacagggcc accagcgcag gacgcaggcg cttgcctccg gcgcgggcca ggtaggtggc
     1621 cgactcggtg aggaacggcg tcccggccgc ggacgactcc gtgaggatct tctcgatacg
     1681 ctcgagatca tcggaaacca ggtcaagaac gatggcgact tcgtcgcggg acagttgctc
     1741 catcgatgtc aggcccccct ccgcacccga tacctaggcg atgccggcag gcagcgggaa
     1801 gtgcacatct tcgatggcga cggccacctc ctcgacctcg ccgaagccca gaccccggag
     1861 gtgggcgacg accccgtcga ccaggtgttc cggcgtggag gctccggacg acacaccaac
     1921 gacctcggcc gcctccagcc agcccggatc gatcgcacgt tcgtcagaaa taaggtgtgc
     1981 aggggtacca gcctccctac tgacctctag gagtcggttg gagttagagg aattgtcgga
     2041 gcctacaatg agcacgaggt cgctgcgagc ggccagcgcc ttgaccgcct cctggcggtt
     2101 ctggctggcg tagcagatgt cgtccttgcg cgggccggcg atcgccggga accggcgccg
     2161 caggatgtcg acgatcccac cggtctcgtc gaccccgagc gtggtctggg tcaggtaggc
     2221 gacgttgccg gggtcctcgg cgtcgaccgc cgccgcggca gcggccccgt cgacgaggac
     2281 gacccggtcg ggcgcctccc cggcggtgcc ctcgacctcc tcgtggccgg tgtgaccgac
     2341 caggaagatg gtgcggccgc ccctggcgaa ccggcgggcc tcgacgtgga ccttggtcac
     2401 gagcgggcag gtggcatcga cgacggtcag gttccggcgg cgggcgttct cgtggaccgc
     2461 cggcgaaacg ccgtgggcgg agaagacgca gaccgccccc tccggcaccg cctcctcggt
     2521 gtcgacgaac acgacgccct gcgcctcgaa gcgttcgacg accgcctggt tgtgcacgat
     2581 ttgcttgcgc acgtagat
//
LOCUS       DATGJT010000755         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_102397, whole genome shotgun sequence.
ACCESSION   DATGJT010000755 DATGJT010000000
VERSION     DATGJT010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102397"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1825
                     /locus_tag="VKX24_13200"
     CDS             <1..1825
                     /locus_tag="VKX24_13200"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ09487.1"
                     /translation="LAVPPRMRTLGFATSSLWFILGVPILPIVGTVGDAYGLRVGILI
                     FVPVYVIGSLLLSSSGNFLNNDIEKVRVSTLARAEVRKARVEGRAKLLMVRSLDAGYD
                     GVQVLFGINLDVEDGEMLALLGTNGAGKSTLLRVISGLLVPDAGAVLFDGRDITSSDP
                     NRIAENGIMQVPGGRGIFPGLTVAESLRVSGWLYEDDQEYLKAATRQVLNYFPVLKSR
                     MNVAAGSLSGGEQQMLSLAQAFIAKPRLLMIDELSLGLAPTVVESLLEIVKAIHDNGT
                     TVILVEQSVNVALRLCDRAAFVEKGEVVFSGPTSELLGREDIVRSVFLAEAKGGKPRA
                     DGDVPAARSYETGERPVVLSARGLRKTFGGVVAVDDVDLDLYEGEILGLIGPNGAGKT
                     TTFELISGHISGDAGRVTMLDQDVSNWSSNRRAGAGLGRSFQAARLWPGLTVQETLAL
                     AVTKRMKTPGVLPTMFCLPGVRSAERRVAKEVDEVLEWLNLGEFRDLLTSDLSTGTRR
                     LVELSVIVAMRPSIVMLDEPSAGIAQAETEALAPVLRQTKEQLGCSMFLIEHDMGLMR
                     ALSDRVIAMDTGSVVVVGSPEEVLSHPRVVESYLGAAAGTL"
BASE COUNT          294 a          706 c          715 g          314 t
ORIGIN      
        1 cctcgcggtg ccgccacgga tgcggacctt ggggttcgcc accagctcgc tctggttcat
       61 cctcggggtc cccatcctcc cgatcgtcgg gacggtcggc gacgcctacg gcctccgcgt
      121 cggcatcctc atcttcgtcc cggtctacgt gatcggctcc ctcctcctgt cctcctcggg
      181 caacttcttg aacaacgaca tcgagaaggt gcgggtgtcg acgctggccc gggccgaggt
      241 gcgcaaggcc cgtgtcgagg ggcgggcgaa gctgctcatg gtccgctcgc tcgacgccgg
      301 ctacgacggc gtccaggtcc tgttcgggat caacctcgac gtcgaggacg gcgagatgct
      361 ggccctgctc gggacgaacg gggcgggcaa gagcacgctc ctgcgggtca tctcgggcct
      421 gctcgtcccc gacgccggtg ccgtcctctt cgacggccgg gacatcacga gctcggaccc
      481 caaccggatc gccgagaacg ggatcatgca ggtcccgggc ggccggggga tcttccccgg
      541 gctgaccgtg gccgagagcc tccgggtgtc gggctggctg tacgaggacg accaggagta
      601 cctgaaggcg gccacccggc aggtcctcaa ctacttcccg gtgctgaaga gccggatgaa
      661 cgtcgccgcc ggcagcctct cgggtggcga gcagcagatg ctgagcctcg cccaggcctt
      721 catcgccaag ccccggctcc tcatgatcga cgagctctcc ctcggcctgg cgcccacggt
      781 cgtcgagtcg ctgctcgaga tcgtgaaggc catccacgac aacggcacga ccgtcatcct
      841 tgtggagcag tcggtcaacg tcgccctccg gctctgtgac cgggccgcct tcgtcgagaa
      901 gggcgaggtc gtgttctccg gcccgacgtc cgagctcctc ggtcgggagg acatcgtccg
      961 gtccgtgttc ctcgccgagg cgaagggggg caagccgagg gccgacggcg acgtccccgc
     1021 ggcccgctcc tatgagaccg gcgagcggcc ggtcgtgctc tccgcccgcg gcctgcgcaa
     1081 gacgttcggc ggggtggtgg cggtggacga cgtcgacctc gacctctacg agggcgagat
     1141 cctcgggctc atcgggccga acggggccgg gaagacgacc accttcgaac tgatctcggg
     1201 ccacatctcc ggcgacgcgg gacgagtcac catgctcgac caggacgtga gcaactggtc
     1261 gtccaaccgg agggccgggg ccggactcgg gcgctcgttc caggcggccc ggctgtggcc
     1321 gggcctgacg gtccaggaga cgctcgccct cgcggtgacc aagcgcatga agacccccgg
     1381 cgtcctcccg accatgttct gcctgcccgg ggtgcgcagc gccgagcggc gcgtcgccaa
     1441 ggaggtggac gaggtcctcg agtggctcaa cctgggcgag ttccgggacc tgctcacctc
     1501 cgacctgtcg accgggaccc gccgcctggt cgagctgtcg gtcatcgtgg ccatgcgccc
     1561 gagcatcgtc atgctcgacg agccctcggc ggggatcgcc caggccgaga cggaggcgct
     1621 ggccccggtg ctgcgtcaga cgaaggagca gctcggctgc tcgatgttcc tgatcgagca
     1681 cgacatgggg ctgatgcgag ccctgtcgga ccgggtgatc gccatggaca ccggctcggt
     1741 ggtggtcgtc gggagccccg aggaagtcct gagtcacccg agggtcgtcg agtcgtacct
     1801 cggggccgca gccgggaccc tgtgagcggg gccgagccgg acacgtcgac ggaggccagc
     1861 gtgagggaac cgaagcaccg tcgccatcgc tggcgcgccg tcgtcgccgc ctgctcgctc
     1921 gtcgggctgc tctcgggttg caccctgtcg aagcactacg gcgtcaacac gaccacggtg
     1981 ccggtgaagg gcacctgcaa cacctcgagg atcgaggagc tgggtgccg
//
LOCUS       DATGJT010000756         2892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_931765, whole genome shotgun sequence.
ACCESSION   DATGJT010000756 DATGJT010000000
VERSION     DATGJT010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_931765"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..569)
                     /locus_tag="VKX24_13205"
                     /pseudo
     CDS             complement(1..569)
                     /locus_tag="VKX24_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019875760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            complement(574..1386)
                     /locus_tag="VKX24_13210"
     CDS             complement(574..1386)
                     /locus_tag="VKX24_13210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019873716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLJ09488.1"
                     /translation="MSDPGIDVAGLTVRFEGNVAVESVSLSAPMGRLTGLIGPNGAGK
                     TTTFNVCSGLLRPAEGRILLFGSDVTRRGAASRARRGLGRTFQRMELFTSMTVAENVA
                     LGREARLAGSNPLWQQMATRRQRATVRAATEEALEVCGIGDLADKTVDSLSTGQRRLV
                     ELARVYAGDFRMLLLDEPSSGLDHAESEHLGRILRSLVDDRGIGILLVEHDMALVMAI
                     CDYLYVLDFGRLVFDGTPAETQRSPIVRAAYLGAEDLMEMADLSTGADGAEG"
     gene            complement(1383..>2892)
                     /locus_tag="VKX24_13215"
     CDS             complement(1383..>2892)
                     /locus_tag="VKX24_13215"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HLJ09489.1"
                     /translation="VVASPDLLGLSGTSPAGVRIASWAIGSSFAALTGILITPSILGM
                     DAFLLSALVVQAFGAVAIGRFTSLPWTYVGGLSIGALAAVSAKYLTKPPLTGLPNVIP
                     FLVLIVVMLVTPKRKLPAGTGRFAGEAVRRKLPVARPVRVGMTAGAVVLLIAIPKLVD
                     TRLPVYTSGLALVVLLLSLSLLTRVSGQISLAHAAFAGVGAATFSKLAAPVHGTGQFG
                     GLGTDTHGGVPWLVALIGAGVVTAAVGAMLALPAMRLSGIYLALATFGFSQLMDNVVF
                     QSWLMFGGSQGTLAGLRAPRPSIGGLDPQNPETWYYIVLAVVAVCCAALVVVRRSRLG
                     RFLRAIADSPTALTTLGLGVNVTRVLVFAVSAFFAGIAGALFAMQIGRVNYISFPAVN
                     SLLYLAILTVTGAVSGYVTSAFLAAFFLAVMPSYLTSITFEIQSMLFGGIAVAAALVS
                     DRVGVGAALRARLGGWVGRAATQAERRRGDGVGPARARQLEAPAAYAVAVDQ"
BASE COUNT          466 a         1014 c         1064 g          348 t
ORIGIN      
        1 gacgtactgc tccacgatca gcagcgacgt cccttcgtgg gccacccgct cgaggaactc
       61 gaagatgccg tcgacgacga ccggggcgag gcccatggag acctcgtcga gcaggatgac
      121 gggcgcaccg gagaggtagg cccgggccag cgccagcatc tgctgctcgc ccccgctcat
      181 cgtcccggcg gcctggtcga gccggtcctt gaggcggggg aacgcctcgg tggcccggtc
      241 gaccgccgtc cgctccgttc ccggggcggc gaacagcacg aggttctccc gcaccgacag
      301 cggcgggaag accccgcgtc cctcgggcac gtggcacagc ccccgggccg ccagctggtg
      361 ggaggccagg ccggtcacgt cctcgccgtc gagcgtgatc cgtcccgccg ccggccgcag
      421 cagcccggaa gccacccgca gcagcgtcgt ctttccggcg ccgttgggcc gagcagcgcc
      481 accaccgagg agcgggggac gacgaggctg acgtcgcgca ggacggggac tccggcgtat
      541 ccggcgctca cgccttcgat cgtcagcatc cgttcatccc tccgccccgt cggctccggt
      601 cgacaggtcc gccatctcca tgaggtcctc ggcgccgagg taggccgccc gcacgatggg
      661 gctgcgctgc gtctcggccg gcgtaccgtc gaacacgagc cggccgaagt cgaggacgta
      721 gaggtagtcg cagatggcca tgaccagcgc catgtcatgt tccacgagca ggatgccgat
      781 gccgcggtcg tcgacgagcg accgcaggat ccggccgagg tgctccgact cggcgtggtc
      841 gagacccgac gacggctcgt cgaggaggag catccggaag tcgccggcgt agacccgggc
      901 caactccacc agtcgccgct ggccggtgga caggctgtcc acggtcttgt cggccaggtc
      961 gccgatcccg cacacctcca gcgcttcttc ggtggcggcc cggacggtgg cccgctggcg
     1021 ccgcgtcgcc atctgttgcc acagcgggtt ggatccggcc aggcgggcct cccggccgag
     1081 ggcgacgttc tcggccaccg tcatggacgt gaagagctcc atccgctgga acgtccggcc
     1141 gagaccccgg cgggcccggc tggccgcccc ccgccgggtg acgtccgatc cgaagagcag
     1201 gatccggccc tcggccggtc gcaacaggcc gctgcaaacg ttgaaggtgg tggtcttgcc
     1261 cgcgccgttc ggaccgatga gtccggtcag tcggcccatg ggggccgaca ggctcacgct
     1321 ctcgacggcg acgttgccct cgaagcggac ggtgaggccg gcgacgtcga tgcccggatc
     1381 gctcactggt ccaccgccac ggcgtaggcg gccggagcct cgagctggcg ggcccgggcc
     1441 ggcccgacgc cgtcgcctct ccggcgttcc gcctgggtcg ccgcccgacc gacccatccg
     1501 ccgaggcggg cccgcagggc cgctccgacg ccgacccggt cggacacgag ggcggcggcc
     1561 acggcgatgc cgccgaagag catcgactgg atctcgaagg tgatcgacgt gagatagctc
     1621 ggcatgacgg ccaggaagaa ggcggccagg aaggccgacg tcacgtagcc cgacaccgcc
     1681 ccggtgaccg tcaggatggc caggtacagc agcgagttga ccgccgggaa gctgatgtag
     1741 ttgacccggc cgatctgcat ggcgaacagc gcgccggcga taccggcgaa gaaggccgac
     1801 acggcgaaga ccagcacccg ggtcacgttg acgccgagcc cgagggtggt gagagcggtg
     1861 ggggagtcgg cgatggcccg caggaaccgg ccgagtcggg agcgccgcac caccaccagc
     1921 gcggcacagc acacggcgac cacggccagc acgatgtaat accacgtctc gggattctgg
     1981 gggtcgaggc cgccgatgct cggccgcggg gcccgcaatc ccgccaaggt cccctgcgaa
     2041 ccgccgaaca tgagccagct ctggaagacg acgttgtcca tgagctggct gaacccgaac
     2101 gttgccaggg ccaggtagat cccggacagg cgcatggccg gcagcgccag catcgccccg
     2161 accgcggcgg tgaccacacc ggcgccgatg agggccacca gccaggggac gccgccgtgg
     2221 gtgtcggtgc cgagcccgcc gaactggccc gtcccgtgca cgggggcggc cagcttgctg
     2281 aaggtggccg ccccgacgcc ggcgaaggcg gcgtgggcca gcgagatctg gcccgagacc
     2341 cgggtcagca gcgacagcga caggagcagc acgaccagcg ccaggcccga cgtgtacacc
     2401 gggaggcggg tgtcgacgag cttcgggatg gcgatcagca ataccaccgc gccggcggtc
     2461 atgccgaccc gcaccggtcg cgccaccggc agcttccggc ggacggcctc gccggcgaag
     2521 cggccggtgc ccgccggcag tttgcgcttc ggtgtgacca gcatcaccac gatcaggacg
     2581 aggaacggga tgacgttggg cagccctgtg aggggtggtt tcgtcaggta cttggccgag
     2641 acggcggcca gcgcgccgat ggagaggccg ccgacgtagg tccagggcag gctggtgaac
     2701 cggccgatcg ccactgcgcc gaaggcctgg acgaccaggg cgctgagcag gaaggcatcc
     2761 attccgagga tgctgggcgt gatcaggatt ccggtcaggg cggcgaagga cgagccgatg
     2821 gcccaggagg cgatgcggac accggccggg ctcgtgcccg acaggccgag gaggtcgggg
     2881 gaggcgacga cg
//
LOCUS       DATGJT010000757         5242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_103082, whole genome shotgun sequence.
ACCESSION   DATGJT010000757 DATGJT010000000
VERSION     DATGJT010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5242
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103082"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..1446)
                     /locus_tag="VKX24_13220"
     CDS             complement(187..1446)
                     /locus_tag="VKX24_13220"
                     /inference="COORDINATES: protein motif:HMM:NF024919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HLJ09490.1"
                     /translation="MRQTGGVRAMVLVLGAVACATLPVPGVGGPTRAAADGGYRTSQF
                     LWRATGGLEQWELGPGTTRATDGRLALDPATSQGATDAAGAYHGKNFYNGGPYVFGEV
                     TSPLTSAGFAVTRAVPSWDADTPPGSWIELSLRARLAGGRLTRWYNAGVWAADGSTVA
                     RHSVKDQDDGDAALATDTLVIPPGKPAAEALQVKVRLMSARPGAVPSLRLATVALSST
                     PQERPATPAGDPARWGKVLDVTACSQSYPDGGEGWCSPTSTSMIVGYWAHDAGPCEAR
                     VRAAVDGVFDWVYNGHGNWPFNTAYAAGRGLEAWVTRFPSLADAESWIAAGVPLAISY
                     SWKAGELTGAPVRSSEGHLGVLVGFDAHGDPVVNDPAARSTAELRRTYKRQELENVWV
                     GHSGGTAYLAYPPGWPTPWDRREGSRP"
     gene            1494..1988
                     /locus_tag="VKX24_13225"
     CDS             1494..1988
                     /locus_tag="VKX24_13225"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007464727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLJ09491.1"
                     /translation="MRIREATSEDFDEIARLTVAAYRALDTWVGDDYAAHLADVAARA
                     AAENTLVLVAEDEVDGRILGSVTLTLGGGPFFEWNHGVDGDCGFRMLAVDPAAQGRGA
                     GPRLVVECLDRARAAGRRRMIIGSTEWMTTAHRIYERLGFRRAPALDQQWGDIRGLCF
                     TLDL"
     gene            2579..3106
                     /locus_tag="VKX24_13230"
     CDS             2579..3106
                     /locus_tag="VKX24_13230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09492.1"
                     /translation="MRKNQKRALLIAVPVVGALTGAALVVPAMASSTPTTTRSAGLLG
                     GVLGGGSGGLLGGVTGSLGGVTGGTSGGLLGGVTGTLGGVTGGSSGGLLGTVTKTLGG
                     VTGGGSGGLLGGVTGTLGGVTGGSSGGGLLAPVTGILGGVTGGSSGGVLSPVTGILGG
                     VTGGSSTGLLGGLGL"
     gene            complement(3214..4296)
                     /locus_tag="VKX24_13235"
     CDS             complement(3214..4296)
                     /locus_tag="VKX24_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09493.1"
                     /translation="MTTTPQKVEPRPEPEPAAAKRGARGRVYGFVGLCVVCVAVGVGY
                     VVHSGGRTNRALDAKGAVAAGAPSPAAVMAKPHLLVRDMAAGQAGYAGVLPLAGAGGP
                     KAVTDLPCARLYMEAGNGLCLSDHGDILNPYKVVFFGPDFQERSEKPLPGVPSRARVS
                     ADGKYGSSTVFVTGDSYAAGAFSTRTTIWDMATGNELVNLEEFSVWDHGRQIQSADFN
                     FWGVTFDPTNSSHFYATLGTKGHTYLISGDVTAKKADILRDGVECPSVSPDGTHIVFK
                     QRTSAGGADLPTWRLAVLDLATLKDHPLAETRNVDDQAEWLDNATVVYAVDTGVGAPS
                     IWAAAADGSGAPRLFVADADSPSVAR"
     gene            complement(4293..>5242)
                     /locus_tag="VKX24_13240"
     CDS             complement(4293..>5242)
                     /locus_tag="VKX24_13240"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLJ09494.1"
                     /translation="KVGLLATTASVPTAGILFLDRTGKGVRTAPRDALISLSSRPETM
                     GLAFGIHRALDTVGAFIGPILAFLLLWFTPKAYDSVFVVSLCFAVLGVGVLVCFVQNP
                     PRERLKPARAPAFTRESTRRLMGNRSFRRITVAGALLGLVTISDAFVYLVYQHRTKMT
                     PTTFPLLFVGTSLAYLLLAVPLGRLSDRIGRAPVFLAGNAVLIVCYVVLRGSGSGFLT
                     IAVILGLLGTYYAATDGVLMALASEVIPAELRSSGLAWLTTVTTLAKALASFIFGACW
                     AWVGPNGAVSWFVAGMAVAVPIAVLVLFHPSTRREVPAR"
BASE COUNT          684 a         1865 c         1992 g          701 t
ORIGIN      
        1 agcgagcgca tgtgctcgct gcggccccag ccgtcgacgt cggacagcag cccgtcgagg
       61 cccgtcacgc cggggtccgg cggccggggg acgggcacga gctcccgccc ggtccgcccg
      121 gcggcgcccg cttcggtcag gtcgaggacg gcggcctcgg gcggctctcg ctccacagtc
      181 cgcccattat ggtcggctgc cctcgcggcg gtcccacggt gtcggccacc ccggcgggta
      241 ggccaggtag gccgtaccgc cggaatggcc cacccacacg ttctccagct cctggcgctt
      301 gtaggtgcgc cgcagttcgg cggtgctcct ggccgccggg tcgttgacca ctgggtcacc
      361 gtgggcgtcg aagccgacca gtacgccgag atggccctcg gagctgcgga ccggcgcccc
      421 ggtcagctcc ccggccttcc aggagtagct gatggcgagg gggacgccgg cggcgatcca
      481 cgactcggcg tcggccaggc tcgggaagcg ggtgacccag gcctccaggc cccgcccggc
      541 ggcgtaggcg gtgttgaagg gccagttgcc gtggccgttg tagacccagt cgaagacgcc
      601 gtcgacggct gcccgcaccc gggcctcgca gggcccggcg tcgtgggccc agtacccgac
      661 gatcatcgac gtcgacgtgg gcgagcacca gccctcgccg ccgtcgggat aggactggga
      721 gcaggccgtc acgtcgagga ccttgcccca ccgggccggg tccccggccg gcgtggccgg
      781 ccgttcctgc ggtgtgctcg acagcgccac ggtcgccagc cggaggctgg ggacggcgcc
      841 cggccgggcc gacatcagcc gcaccttgac ctgcagcgcc tcggcggcgg gcttcccggg
      901 cgggatcacg agggtgtcgg tggccagggc ggcgtcgccg tcgtcctggt ccttcacgga
      961 gtggcgggcg acggtggagc cgtcggcggc ccagacgccg gcgttgtacc acctggtgag
     1021 gcgcccgccg gccagccggg cccggagcga gagctcgatc cacgagccgg gcggcgtgtc
     1081 ggcgtcccac gacgggacgg cccgggtgac ggcgaacccc gccgacgtca gcgggctcgt
     1141 gacctcgccg aacacgtagg gcccaccgtt gtagaagttc ttgccgtggt aggcgccggc
     1201 ggcgtcggtc gcgccctgcg aggtggccgg gtcgagggcc aggcgcccgt ccgtcgcccg
     1261 ggtggtgccc gggccgagct cccactgctc gaggccgccc gtcgcccgcc acaggaactg
     1321 cgacgtgcga tagccgccgt cggccgcggc tcgggtgggg ccgccgaccc cgggcacggg
     1381 cagggtggcg caggccaccg caccgaggac gagaaccatc gcccgcacgc ccccagtctg
     1441 ccgcaccggg cggggtcgga cgggagagca ccaggggtta tctttccgta gccgtgcgga
     1501 tccgggaggc aacgagcgag gacttcgacg agatcgcccg gctcacggtg gccgcctacc
     1561 gggcgctcga cacctgggtc ggcgacgact acgccgccca cctcgccgac gtcgccgccc
     1621 gggcggcggc cgagaacacg ctcgtcctcg tggccgagga cgaggtcgac ggccggattc
     1681 tcgggtccgt cacgctgacg ctgggcggcg gcccgttctt cgagtggaac cacggcgtcg
     1741 acggcgactg cggattccgc atgctggccg tcgaccccgc cgctcagggc cggggcgccg
     1801 gtccccggct cgtggtcgag tgcctcgacc gggcccgggc cgccggccgg cgccgcatga
     1861 tcatcggctc caccgagtgg atgaccacgg cccaccgcat ctacgagcgg ctcggcttcc
     1921 gccgggcccc ggccctcgac cagcagtggg gcgacatccg ggggctgtgc ttcacgctcg
     1981 atctgtgacc gccatcgcgg cccgccggta gggtaccgac gtcagaccgt cgtgcgcacg
     2041 ttcccgtcgg cggcggatcc gctcggctac ggcgaacgct ccgtcgccgc agtcggcgag
     2101 ggccaaatgt gaggcgccat ctctcgccgt cggtgctctt cgtgctactg gccaccgggc
     2161 tactgatcgg cgcgtcctac tccgggctcg gcgatcacgc caagctggtc gttcgggtca
     2221 acggcacctt tcgcgccggg cttgaggggt gtgcgccggc cgccggtccg gctcttcggt
     2281 actagtgcgc ttcccggccg gggagtggac cgtccggcgt aggcccttcc cccgcagggc
     2341 tccgtcttcc ggccgacgcg gcggatcgcg ccgcttcgcg gcgtgcatgc cgctcgtatt
     2401 tgggtccgac gtggtcacgg cacgccagtc atcctgaact agtcatgggg cccattgggt
     2461 ggtcatcgag gccaagtttg ttcacgccgt ctcaaggccc gtcgcggccg gcccgttacc
     2521 tgtttccgac accaacgccg aacgccggcg ccggagattt ccgaagcaaa ggagcatcat
     2581 gcgcaagaac cagaagcggg ccctcctcat cgccgtcccc gtcgtcggcg ccctgaccgg
     2641 agcggcgctc gtcgtgcccg cgatggcgtc ctccactccg accacgaccc ggtcggccgg
     2701 cctcctcggc ggcgtcctcg gcgggggctc cggcgggctg ctcgggggcg tgaccggctc
     2761 gctcggcggg gtgaccggcg gaacctcggg cgggctgctc ggtggcgtga cgggcacgct
     2821 cggcggggtg accggcggga gctcgggcgg gctgctcggg accgtgacga agacgctggg
     2881 cggcgtcacc ggcggtggct cgggcggcct cctcggcggt gtgaccggca cgctgggcgg
     2941 tgtgacgggc gggagctccg gtggcgggct gctcgccccg gtgaccggca tcttgggagg
     3001 ggtgacgggc gggagctcgg gcggtgtgct gtctccggtg accggcatcc ttgggggtgt
     3061 gaccggcggg agcagcaccg gccttctggg cggcctcggc ctctagcccg acaaccgggt
     3121 ggccggcagg tcagggcggg gtcggatcca ccggccccgc cctctcgcgt ccgggcccgg
     3181 gccgttgccg gcggcgggat cagcgggccg gcgtcagcgg gcgacggacg gggagtcggc
     3241 gtcggcgacg aacaggcggg gggcgcccga cccgtcggcg gcggcggccc agatgctcgg
     3301 ggctcccacg ccggtgtcaa cggcgtagac cacggtcgcg ttgtcgagcc actcggcctg
     3361 gtcgtcgacg ttgcgggtct cggccagcgg gtggtccttc agcgtggcca ggtcgaggac
     3421 ggcgagccgc cacgtcggca ggtcggcccc gccggcgctg gtgcgctgct tgaacacgat
     3481 gtgcgtcccg tcgggcgaca ccgaggggca ctccaccccg tcccgcagga tgtcggcctt
     3541 cttcgcggtc acgtcaccgg agatgaggta ggtgtggccc ttcgtcccca gcgtggcata
     3601 gaagtgcgag ctgttcgtgg ggtcgaacgt cacaccccag aagttgaagt ccgccgactg
     3661 gatctgcctg ccgtggtccc agacggagaa ctcctccagg ttgaccagct cgttgccggt
     3721 ggccatgtcc cagatggtcg tccgcgtgga gaaggcaccg gcggcgtagg agtcgccggt
     3781 gacgaacacc gtcgagctgc cgtacttccc gtcggccgag acccgggccc ggctcggcac
     3841 gccgggcagc ggtttctccg accgctcctg gaagtcgggc ccgaagaaca ccaccttgta
     3901 gggattgagg atgtcgccgt ggtccgagag gcacagcccg ttgccggcct ccatgtagag
     3961 ccgggcgcag ggcaggtcgg tcacggcttt cggcccgccg gcaccggcca gcggcaggac
     4021 tccggcgtag ccggcctggc cggcggccat gtcccgcacc agcaggtgcg gcttggccat
     4081 caccgccgcc ggggagggcg ccccggcggc cacggcgccc ttggcgtcga gggcccggtt
     4141 cgtccggccg ccggagtgga cgacgtagcc cacgcccacc gccacgcaga cgacgcacag
     4201 gccgacgaag ccgtacaccc ggccccgggc cccccgcttc gccgcggccg gctccggctc
     4261 cgggcggggc tcgaccttct ggggcgtcgt cgtcatcggg ccggcacctc ccggcgggtc
     4321 gacgggtgga acaggacgag gacggcgatc gggaccgcca cggccatccc ggccacgaac
     4381 cacgagaccg cgccgttcgg gccgacccac gcccagcagg cgccgaagat gaacgacgcc
     4441 agcgccttgg ccagcgtggt cacggtggtc agccaggcca ggccgctgct gcgcagctcg
     4501 gcggggatca cctcgctggc cagcgccatg aggacgccgt cggtggcggc gtagtacgtg
     4561 ccgagcaggc cgaggatgac ggcgatcgtg aggaagccgg atccggagcc ccgcaggacg
     4621 acgtagcaga cgatcagcac ggcgttgccg gccaggaaca ccggcgcccg cccgatccgg
     4681 tcggacaggc ggccgagggg aacggcgagg agcaggtagg ccagcgaggt ccccacgaac
     4741 agcagcggga acgtcgtcgg cgtcatcttg gtgcggtgct ggtagacgag gtagacgaag
     4801 gcgtcgctga tcgtcacgag gccgaggagg gcgccggcca ccgtgatccg ccggaacgac
     4861 cggttgccca tcaggcggcg cgtgctctcc cgggtgaagg ccggggcccg ggccggcttc
     4921 agccgctcgc ggggcgggtt ctgcacgaag cagacgagga cgccgacgcc gagtaccgca
     4981 aagcacaggc tgaccacgaa cacggagtcg taggccttgg gggtgaacca cagcagcagg
     5041 aaggccagaa tcgggccgat gaaggccccg acggtgtcga gcgcccggtg gatgccgaag
     5101 gccagcccca tcgtctccgg ccggctcgac agcgagatca gggcgtcgcg gggcgcggtg
     5161 cgcacgccct tgcccgtccg gtcgaggaag aggatgccgg ccgtcggaac ggaggccgtc
     5221 gtggccagca gcccgacttt gc
//
LOCUS       DATGJT010000758         3892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1240134, whole genome shotgun sequence.
ACCESSION   DATGJT010000758 DATGJT010000000
VERSION     DATGJT010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240134"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1134
                     /locus_tag="VKX24_13245"
     CDS             <1..1134
                     /locus_tag="VKX24_13245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09495.1"
                     /translation="SIGSSAARDGARVALINYVDADVPGSPDNLAVVNAVQRRLVGLV
                     TYQSATVVCRPADNLAATEPCEPGSVDLDRDDVVEVAVTWRHNGAAAFGPATSSATAR
                     MVIVGGPDLSTPPTTAPVTTTTTGPSTTTTTAPAKQTEIAAQMADNDHDGRIDQLLVT
                     FSGALDPSCASGWTLAHVPSGGSLAGVTVSGSTATLAVTEGPGAPDTAVNSFTVSFAG
                     CSSAAAFGPLAPSDAAGPVFVSMSDGGGTDGKPEPGDTLDLVFSEPLSPTWGTSTTVA
                     VTMSRQGNHNATISIPSLVSGNTFDSGSPGYVARNQTVTFNNSTLSVSGATLRLTLGS
                     ACTGCASAGVGQGSFTFTPAGTIRDAGGYVSIAPITATNLKLF"
     gene            1200..2156
                     /locus_tag="VKX24_13250"
     CDS             1200..2156
                     /locus_tag="VKX24_13250"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein TadG-related protein"
                     /protein_id="HLJ09496.1"
                     /translation="MVLMAVSILALLGLTGLVVDGGRAYADHRATQNAADAAALAGAG
                     ALNSVLFAGAGQEAVVYNAVVASLAANTVNGSPDCRLVDQAGGDLGDCPTANTGAGLP
                     AAVAGVSVRARDSQSGSFIKALGISGFSASASATAQIEALRAGSSPFMICGLDAAHGG
                     FDPPLLLASGSSWVVNPAAVGQTYGIHGPQVPDCGAGSNSFKGLTDGSTNVAVPGWWQ
                     SDTGVHAGPVRNEVVRSDACTTTDGFDNWTGCTIVVPICVQGQGSGSGVQMYCVHFGV
                     FSVSQSHANAHQAVFLGAGVIQDGPGGGKPVANEARLIKLSQ"
     gene            complement(2378..3550)
                     /locus_tag="VKX24_13255"
     CDS             complement(2378..3550)
                     /locus_tag="VKX24_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012854762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HLJ09497.1"
                     /translation="MTTDGERTALSERVEFVWYGDDAPRYDLGPRHPLRFDRVPLTRA
                     LIHAYGILDGARVLETPARDATEDEILLVHGEAYVDAVRRAGHGEDGPWCDFGFGPGD
                     NPIFPLMHEATLRVVGATLTAAEAVWSGRAEHAFNPAGGLHHALPDRASGFCVYDDPA
                     VAIRWLLDRGARRVAYVDVDVHHGDGVQAIFFADPRVLTISLHQDGATLFPGTGAIGE
                     LGSGDARGTKVNVPLPPFTGDDLWMRAFSEVVPPLVEAWAPDVLVTQLGCDTHHHDPL
                     AELHLTTGAYRRTAGVLHELAHRAAGGRWVATGGGGYQWARVVPRAWTLYFAEMAGVA
                     VPDEIPGPWREEAAALAGFEVPARLSEPPARPSPVEPPEITRIIDRVKAEVFPFHD"
     gene            complement(3540..>3892)
                     /locus_tag="VKX24_13260"
     CDS             complement(3540..>3892)
                     /locus_tag="VKX24_13260"
                     /inference="COORDINATES: protein motif:HMM:NF016818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="siderophore-interacting protein"
                     /protein_id="HLJ09498.1"
                     /translation="PAIGQLLEVLPGDKPVRVVVEVADPDARLDLPAHPGATVEWYDL
                     PAGAPPGDALVAAVTAATGAGLPAGTRIWAAGEAAAVQRIRRHLFEECGLPRSQAWVR
                     GYWKHGRAGDGGDD"
BASE COUNT          517 a         1489 c         1402 g          484 t
ORIGIN      
        1 tcgatcgggt ccagcgccgc ccgtgacggc gcccgggtgg cgttgatcaa ctacgtggac
       61 gccgacgtcc ccggcagccc ggacaacctg gcggtggtca acgccgtcca gcgccggctc
      121 gtcggcctcg tcacctacca gtcggccacc gtggtctgcc gcccggccga caacctcgcc
      181 gccaccgagc cgtgcgagcc gggctcggtg gacctcgacc gcgacgacgt cgtcgaggtc
      241 gccgtgacct ggcgccacaa cggcgcggcg gccttcggcc cggcgacgtc ctcggccacc
      301 gcccgcatgg tcatcgtcgg cggccccgac ctcagcaccc cgccgaccac ggccccggtc
      361 acgacgacga ccaccggccc gtcgaccacg acgaccacgg cgccggcgaa gcagaccgag
      421 atcgccgccc agatggccga caacgaccac gacggccgga tcgaccagct cctcgtcacg
      481 ttctccgggg cgctcgaccc ctcgtgcgcc tcgggctgga cgctggccca cgtcccgtcg
      541 ggcggctcgc tggccggggt gacggtgtcc ggctcgacgg ccacgctggc cgtcaccgaa
      601 ggccccgggg cccccgacac cgcggtcaac agcttcaccg tctccttcgc cggctgcagc
      661 agcgccgccg ccttcgggcc gctggccccg tccgacgccg ccggcccggt gttcgtctcg
      721 atgagcgacg gcggaggcac cgacggcaag cccgaaccgg gcgacacgct cgacctcgtg
      781 ttctccgagc cgctcagccc gacctggggt acgtcgacca ccgtggccgt caccatgtcc
      841 cggcagggca accacaacgc cacgatctcg atcccgtcgc tggtcagcgg gaacaccttc
      901 gacagcggca gtcccggcta cgtggcccgg aaccagacgg tgacgttcaa caactcgacg
      961 ctgtcggtgt ccggcgccac gctgcggctg acgctggggt cggcctgcac cggctgcgcc
     1021 tccgccggcg tggggcaggg ctccttcacc ttcacgccgg cggggacgat ccgcgacgcc
     1081 ggcggctacg tctccatcgc cccgatcacg gcgaccaacc tcaagctctt ctgatcggag
     1141 ggatcaccgt gtggcgccag cgacggacgg atgaccggga tggcgaacgg ggagccttcg
     1201 tggtactcat ggccgtcagc atcctcgccc tgctcggcct caccgggctc gtcgtcgacg
     1261 gcggccgggc ctacgccgac caccgggcga cccagaacgc cgccgacgcc gccgccctgg
     1321 ccggcgccgg ggcgctcaac tcggtgctct tcgccggcgc cggccaggag gcggtggtct
     1381 acaacgccgt cgtcgcctcg ctggccgcca acaccgtcaa cggctcgccc gactgccgcc
     1441 tcgtcgacca ggccggcggc gacctcggcg actgccccac ggccaatacc ggcgccggcc
     1501 tgccggcggc ggtggccggc gtgtccgtgc gggcccggga cagccagagc ggcagcttca
     1561 tcaaggccct gggcatcagc gggttctcgg cctcggcctc cgccaccgcc cagatcgagg
     1621 cgctgcgggc cggctcgtcg ccgttcatga tctgcggcct cgacgccgcc cacggcggct
     1681 tcgacccgcc gctgctgctg gcctcgggca gctcctgggt cgtgaacccg gccgccgtcg
     1741 gccagacgta cgggatccac ggcccccagg tccccgactg cggcgccggc agcaacagct
     1801 tcaagggcct gaccgacggc tcgaccaacg tcgccgtgcc gggctggtgg cagtccgaca
     1861 ccggcgtcca cgccgggccc gtccgcaacg aggtggtccg cagcgacgcc tgcaccacca
     1921 ccgacggctt cgacaactgg acgggctgca cgatcgtcgt gccgatctgc gtccagggcc
     1981 aggggagcgg cagcggcgtc cagatgtact gcgtgcactt cggggtcttc agcgtgtcgc
     2041 agtcccacgc caacgcccat caggcggtct tcctcggcgc cggcgtgatc caggacgggc
     2101 cgggcggagg caagccggtg gccaatgagg cccgcctcat caagctgagc cagtaaccgg
     2161 gagctcctga ccacgccggg ctcgctggtg tacggctgag cgcctcgtcg cccgacatac
     2221 cgtcccggca atagcgcgct ctgcccaagc accacctctc gtgatggagg ccctgcccgg
     2281 gcccttttca ccaccggtcg tgctgcggcg tgccccgggc cctgaaccgc agcgcgggca
     2341 cccgccgtgg tacagggacg ggacgccacg gaggccgtca gtcgtggaac gggaagacct
     2401 cggccttcac ccggtcgatg atccgggtga tctcgggcgg ctcgaccggt gaggggcggg
     2461 ccggcggctc cgagagccgg gccgggactt cgaagccggc cagggcggcg gcctcctccc
     2521 gccagggccc ggggatctcg tcgggcacgg cgaccccggc catctcggcg aagtacagcg
     2581 tccaggcccg ggggacgacc cgggcccact ggtagccccc gccaccggtc gccacccacc
     2641 gcccgccggc ggcccggtgg gcgagctcgt ggaggacgcc ggcggtgcgc cggtaggccc
     2701 cggtggtcag gtggagctcg gccagcgggt cgtggtggtg ggtgtcgcag ccgagctggg
     2761 tcacgagcac gtcgggcgcc caggcctcga ccagcggcgg gaccacctcg gagaaggccc
     2821 tcatccacag gtcgtcgccg gtgaacggcg gcagcgggac gttgaccttg gttccccggg
     2881 cgtctcccga accgagctcg ccgatggcgc cggtgcccgg gaacagcgtg gccccgtcct
     2941 ggtggaggga gatcgtgagc acccgggggt cggcgaagaa gatggcctgc accccgtcgc
     3001 cgtggtggac gtcgacgtcg acgtaggcga cgcgccgggc gccgcgatcc aacagccagc
     3061 ggatggccac cgccgggtcg tcgtagacgc agaagccgct ggcccggtcg ggcagggcgt
     3121 ggtggaggcc gccggcggga ttgaaggcgt gctcggcccg acccgaccac accgcctcgg
     3181 cggcggtcag cgtggcgccg acgacccgca gcgtcgcctc gtgcatcagc gggaagatcg
     3241 ggttgtcgcc cggcccgaac ccgaagtcgc accacggccc gtcctcgccg tggccggccc
     3301 ggcggacggc atcgacgtag gcctcgccgt ggaccagcag gatttcgtcc tcggtggcgt
     3361 cccgggccgg ggtctcgagg acccgggcgc cgtcgaggat gccgtaggcg tggatcagcg
     3421 cccgcgtcag cggcacccgg tcgaagcgga ggggatggcg gggcccgagg tcgtagcgcg
     3481 gggcgtcgtc gccgtaccac acgaactcca cccgctcgct cagggccgtc cgctccccat
     3541 cagtcgtcac cgccgtcgcc ggcccggccg tgcttccagt agccccggac ccaggcctgg
     3601 gaccggggga gcccgcactc ttcgaacagg tggcggcgga tccgctgcac cgcggcggcc
     3661 tcgccggcgg cccagatgcg ggtcccggcc ggaagaccgg cgccggtggc ggcggtcacg
     3721 gcggccacga gggcgtcgcc gggcggggcg ccggcgggaa ggtcgtacca ctcgacggtg
     3781 gccccggggt gcgcgggcag gtcgagccgg gcgtcggggt cggccacctc gacgacgacc
     3841 cggacgggct tgtccccggg gagcacctcg agcagctgcc cgatggccgg ga
//
LOCUS       DATGJT010000759         2094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_932247, whole genome shotgun sequence.
ACCESSION   DATGJT010000759 DATGJT010000000
VERSION     DATGJT010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_932247"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(417..1559)
                     /locus_tag="VKX24_13265"
     CDS             complement(417..1559)
                     /locus_tag="VKX24_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09499.1"
                     /translation="MFDVIPRWALALGIGAISAAGVSTVAIESSSSSTPACAESHSAV
                     ADSTTCAKSDAVTGITSNALTSIDQLKAQLTSSVSSAQGQVQGIVANAESQVSSASTA
                     AQSALGSTMTQVGNQADVTAAFTTASNAIGQAFTNVSGALDAVQANAGNAFSVANAAL
                     DAPNMALGQAQTALSSATDSANAAVATAQQAVNSAIDQAQAQVNSALSTLQNTISGAL
                     SSASAQGNSNLAGLLDTAKGQVANVQSTLSGALSQVSGTVASVPATVTSLPAQVGAVA
                     NNVTGTVNSTVKSAPASVTSTPAVSGATSAVGNAVSSVTDAANGLPSTVSGLASTVTG
                     IVSAPTSQLPLGGTLGSILGGTGGSASGSASFTTGGGLLGLNLGLL"
     gene            1813..>2094
                     /locus_tag="VKX24_13270"
     CDS             1813..>2094
                     /locus_tag="VKX24_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013325160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HLJ09500.1"
                     /translation="MAELRLPQPPSFASVEEERLHRKQRLAAAFRLFAHFGYDEGVAG
                     HITARDPERPDHFWVNPFGMHFGHIRVSDLILVNHHGEVVEGTRHVNAAA"
BASE COUNT          272 a          708 c          791 g          323 t
ORIGIN      
        1 cgtcgtcgcc cggcgagggc aggtcgacct cctccaccac cagcggcttg ccgtgggcgg
       61 ggaggcgggc ggcccggggg cggggcgaat cggtcgtcat ggcgccatcc tcctggttca
      121 gccgtttccg gcggatccgg actttttcga aggatccgaa ctcttttgtg acgcggccgg
      181 gcaatcgtcc gaatagggag acagcgacgg gttccccctc ccgggcggcc ggctctcccc
      241 cagcgccggt cgcccgggaa acccgcttcc tcggccggcg cggcgccagg tgccgacgct
      301 acccggccga aggccgcaca cgcgacagtg gcccccggcc ggagccggag gccactcgtc
      361 gctgcgggtc cggtgcgggc cgcggcccgg caccgggatc agggattcgg gaaggcctag
      421 aggaggccga ggttcaggcc gaggagcccg ccgccggtgg tgaacgacgc cgagccgctg
      481 gcgctgccgc cggtgccgcc gaggatgctc ccgagcgtgc cgccgagcgg gagctggctg
      541 gtcggagcgg agacgatgcc cgtcaccgtc gacgccaggc cgctcacggt gctgggcagg
      601 ccgttggcag cgtcggtcac cgacgagacg gcgttgccca cggcggaggt ggcgccgctc
      661 acggccgggg tgctggtgac ggacgccggc gcgctcttca ccgtgctgtt cacggtgccg
      721 gtcacgttgt tcgccaccgc gcccacctgc gccgggaggc tggtgacggt ggccggcacg
      781 ctggcgaccg tgccgctcac ctgggacagg gcgccggaca gcgtcgactg cacgttggcc
      841 acctgaccct tggccgtgtc gagcagaccg gccaggttgc tgttgccctg agcggacgcc
      901 gacgacaggg cgccgctgat ggtgttctgc agcgtggaga gggccgagtt cacctgcgcc
      961 tgcgcctggt cgatcgccga gttgaccgcc tgctgggcgg tcgccaccgc ggcgttggcc
     1021 gagtccgtgg ccgagctgag cgccgtctgg gcctggccga gggccatgtt cggagcgtcg
     1081 agggcggcgt tggcgaccga gaaggcgttg ccggcgttgg cctggacggc gtcaagagcg
     1141 ccgctgacgt tggtgaaggc ctggccgatg gcgttggagg ccgtggtgaa ggccgcggtc
     1201 acgtcggcct ggttgccgac ctgggtcatc gtggagccga gggccgactg ggcggcggtc
     1261 gacgccgacg acacctggga ctcggcgttg gcgacgatgc cctggacctg gccctgggcg
     1321 ctgctcaccg agctggtcag ctgggccttg agctggtcga tgctcgtcag ggcgttgctc
     1381 gtgatgcccg tcacggcgtc gctcttggca caggtggtgg agtcggcgac ggcggagtgc
     1441 gactcggcgc acgccggcgt gctgctgctc gacgactcga tggcgacggt gctgacgccg
     1501 gcggcgctga tggcgccgat accgagagcg agggcccagc gggggatgac atcgaacatg
     1561 gttgtggctc tccctttcgt cctggcatcg ccccgatccg acactgcgct tcggcgatgc
     1621 tcgagcccgt tgtccgggcg ttgtgacgag tgcttcggct agcccggtcg ggaggttgag
     1681 cccgatgaag ccaacttttc gggcccttaa aggcgatttg acgggcgggg gctagtccgg
     1741 acgggcgatg cccggactcg gcggccccac ccacccgggc caatgccgga cgacggcggg
     1801 tacagtccgg gcatggccga actccgcctt ccccagcccc cgtcgtttgc gtccgttgag
     1861 gaagaacgcc tacaccgcaa gcagcgcctg gccgccgcct tccggctttt cgcccacttc
     1921 gggtacgacg aaggggtcgc cgggcacatc accgcccggg acccggaacg gcccgaccac
     1981 ttctgggtca acccgttcgg catgcacttc ggccacatcc gggtgagcga cctgatcctc
     2041 gtcaatcacc acggtgaggt ggtcgaaggg acccgccacg tcaacgcggc ggcc
//
LOCUS       DATGJT010000760         3128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_724909, whole genome shotgun sequence.
ACCESSION   DATGJT010000760 DATGJT010000000
VERSION     DATGJT010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_724909"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VKX24_13275"
     CDS             <1..696
                     /locus_tag="VKX24_13275"
                     /inference="COORDINATES: protein motif:HMM:NF037564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3048 C-terminal domain-containing protein"
                     /protein_id="HLJ09501.1"
                     /translation="GPVRSARSTDIAVFSAFHRPLFAYSGANAVFQAQIRQAPLVDVG
                     YHAAPDRYYREASRHAPYNLFSRTPALFQLAPADSVAPPALFAYRGAGEPAAGPGMVA
                     VQQLSARWATQVDYRWDPAVGEWWRAQDGRPHVDAAGRGVAPANVVVQFVAYRDTGLR
                     DHSGAAVPEAQVIGDGDAWILTGGQLIPAHWSKPSAEAVTRWVDGAGADVKLAPGRTW
                     VELAPPGSVTHTP"
     gene            complement(712..957)
                     /locus_tag="VKX24_13280"
     CDS             complement(712..957)
                     /locus_tag="VKX24_13280"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09502.1"
                     /translation="MDGYNTVIERVVGRHGATLVDLRAAGLAARRAGLEPPLFAADGF
                     HPSTAGHRAIAAAFAGVLAAPDRTDGAPGLLPAETMA"
     gene            complement(936..1394)
                     /locus_tag="VKX24_13285"
     CDS             complement(936..1394)
                     /locus_tag="VKX24_13285"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HLJ09503.1"
                     /translation="MPGERRTAADLYVAVGASDAVGVGARRPRTEAWPRLLHRRAFPR
                     RTRFVNLGVSGATAASALAGQVPRAERLRADVVTVWLVVNDVIAGVALDGYEAVLDDL
                     VGRLRAGGTARVLVGNCPYLDRLPAYLAGWAVGLRRNRPRPTGSWTATTR"
     gene            complement(1501..1989)
                     /locus_tag="VKX24_13290"
     CDS             complement(1501..1989)
                     /locus_tag="VKX24_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007914324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3291 domain-containing protein"
                     /protein_id="HLJ09504.1"
                     /translation="MAWHLAQFNIGRLRAPTDDPLLAEFMANLDRVNALAEATAGFVW
                     RLQTEDGNATAIRPFDDDLMAVNLSVWESMESLADYVYRSAHTGFLRRRGEWFERRQD
                     AHMVLWWIPAGTLPSVEDAMARLALLRRDGPNPDAFTFRRPFPAPGGVAVTADERNAC
                     PA"
     gene            2222..2749
                     /locus_tag="VKX24_13295"
     CDS             2222..2749
                     /locus_tag="VKX24_13295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019070211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HLJ09505.1"
                     /translation="MSTTNEAPHTCPACRIIDQADGVEDGNLYKVEHYRTRNEQALLR
                     ALLRAQDRAADQITAFAGSLNFVYLHSVWFGIWIALNVGVLGASLKFDKFPFGLLTMI
                     VSLEAIFLSTFVMVSQNRQAARADVRSQLDFETNLRSEIWSVHIGHALGVDPAHVEDV
                     VRQAIEGSKAQLAGT"
BASE COUNT          440 a         1204 c         1102 g          382 t
ORIGIN      
        1 ggtccggtcc gctccgcccg ctccaccgac atcgccgtct tcagcgcctt ccaccgtccg
       61 ctgttcgcct actccggcgc caacgccgtc ttccaggccc agatccgcca ggcgcccctc
      121 gtcgacgtcg ggtaccacgc cgcccccgac cggtactacc gggaggcctc ccgccacgcc
      181 ccctacaacc tcttcagccg caccccggcg ctgttccagc tggcccccgc cgactcggtg
      241 gcgcccccgg cgctcttcgc ctaccgcggc gccggcgagc cggcggccgg ccccggcatg
      301 gtggccgtcc agcagctgag cgcccggtgg gcgacccagg tcgactaccg ctgggacccc
      361 gcggtggggg agtggtggcg ggcgcaggac ggccggcccc acgtcgacgc cgccgggcgg
      421 ggcgtcgccc cggccaacgt cgtcgtgcag ttcgtcgcct accgcgacac cggcctgcgc
      481 gaccacagcg gcgccgccgt ccccgaagcc caggtgatcg gcgacggcga cgcctggatc
      541 ctcaccggcg gtcagctcat ccccgcccac tggtccaaac cgtccgccga agccgtcacc
      601 cgatgggtcg acggcgccgg cgccgacgtg aagctcgccc cgggccgcac ctgggtggag
      661 ctggcgccgc cgggcagcgt gacccacacg ccgtagaccg gccggcgggc ctcaggccat
      721 cgtttccgcg ggcaggaggc ccggcgcgcc gtcggtgcgg tccggggcgg ccaggacgcc
      781 ggcgaaggcg gcggcgatgg cgcggtgacc ggcggtgctg ggatggaagc cgtcggcggc
      841 gaacagcggc ggttcgaggc ccgcccgccg ggcggccagc cccgccgccc gcagatcgac
      901 cagcgtcgcg ccatgacggc cgacgacccg ctcgatcacc gtgttgtagc cgtccacgat
      961 ccggttggcc tcggccggtt ccggcgcagc cccacggccc agccggccag ataggccggc
     1021 agtcgatcca ggtagggaca gttgccgacc agcacccggg ccgtgccacc ggcgcggagg
     1081 cgaccgacca ggtcgtcgag gacggcctcg tagccgtcga gggccacccc ggcgatcacg
     1141 tcgttcacga ccagccacac cgtgacgaca tcggcccgga gccgctccgc ccgggggacc
     1201 tggcccgcca gcgccgaggc cgccgtggcg ccggagacgc ccaggttcac gaaccgggtg
     1261 cggcggggaa aggcccggcg gtgcaggagc cggggccagg cctccgtcct cggacggcgc
     1321 gccccgacgc ccaccgcgtc gctcgccccg acggcgacgt agaggtcggc ggccgtgcgc
     1381 cgttccccag gcatgacacc gaatataggg ccgcggggcc gccacggacc gggcggcgac
     1441 ggccacgccg ttgcgggagc cgaccccgac ccctctgccg gagcgacccc ggcgggtcgc
     1501 ctaggcgggg caggcgttgc gctcgtcggc ggtgaccgcc acgccacccg gcgccgggaa
     1561 gggccggcgg aaggtgaagg cgtcggggtt cggtccgtcg cggcgcagca gggcgagccg
     1621 ggccatggcg tcctccaccg acggcagcgt cccggcgggg atccaccaca acaccatgtg
     1681 ggcgtcctgg cggcgctcga accattcgcc ccgacgccgc aggaagccgg tgtgggccga
     1741 gcggtacacg tagtcggcca gggactccat cgactcccac accgagaggt tcacggccat
     1801 cagatcgtcg tcgaagggcc ggatggcggt ggcgttcccg tcttcggtct gcaggcgcca
     1861 cacgaacccg gccgtggcct cggccagggc gttgacgcgg tcgaggttgg ccatgaactc
     1921 ggccaggagc ggatcgtcgg tgggggcccg gagccgcccg atgttgaact gggcgaggtg
     1981 ccatgccatg gcggcgagcc tacggcaccc gtggggagcc gcgccgacgc gccccgcgac
     2041 accgggtctc accgtgggtt cagcggcccg gcactagggt cccgctggcg ggcggctgag
     2101 cctgtccggg caaccccagc tgccccggac ccggccgccc gcttcacgcg gcccccgggt
     2161 gggcgcgccg ggggccggga gcaggcctgc ccgccggcgt gggctgtggc agcctgagcg
     2221 catgtcgacc accaacgaag ccccgcacac ctgtcccgcc tgccgcatca tcgaccaggc
     2281 cgacggcgtc gaggacggca acctctacaa ggtcgagcac taccggaccc gcaacgaaca
     2341 ggcgctcctg cgggcgctgc tgcgggccca ggaccgggcc gccgaccaga tcaccgcctt
     2401 cgccggctcc ctcaacttcg tctacctcca ctcggtgtgg ttcgggatct ggatcgcgct
     2461 caacgtcggc gtcctcggcg cctccctcaa gttcgacaag ttccccttcg ggctgctgac
     2521 catgatcgtg agcctcgagg cgatcttcct ctccacgttc gtgatggtca gccagaaccg
     2581 tcaggcggcc cgggccgacg tccgcagcca gctcgacttc gagaccaacc tgcgctcgga
     2641 gatctggtcc gtccacatcg gccacgccct cggcgtcgac cccgcccatg tcgaggacgt
     2701 cgtccgccag gccatcgaag gatccaaagc ccagctggcc ggaacctgag gcgaccccga
     2761 cggggaaact cggtggtgcg ggaccggggc agtcgcccta ccgtcgggcg agggatcgcc
     2821 aacgccggtc aagcaccggc tcgacttcgg cggcaaccgc agaatcaacc gtgtgctcaa
     2881 aggccagtcg cgaagagaag cacgtggagc tcccaaacgc caccttgcga accgggtgct
     2941 ctgccgcatg tggcgagatg aacaccgccg acttcagccc ccctggtcgc cgcttggcac
     3001 gggagcgtcc gacactctgc gatcggcaga aggatcgcct cgcttcgagg ttgcctcggc
     3061 gacgcgcaga ggaggcaacg gttcctctcc acgatggggc gggcaccgtc gccgctggcc
     3121 tggacggc
//
LOCUS       DATGJT010000761         2574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_513502, whole genome shotgun sequence.
ACCESSION   DATGJT010000761 DATGJT010000000
VERSION     DATGJT010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513502"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1510)
                     /locus_tag="VKX24_13300"
     CDS             complement(<1..1510)
                     /locus_tag="VKX24_13300"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLJ09506.1"
                     /translation="MRRPPRFVRAAALATVLALLAVACGGGSSKKSSSETTSPGGKQG
                     GVFRLGIVEPTAIDPYNSQDSEGILVTKQVFTGLVQIDNATSEIKPGVADKWDKNGDC
                     TQWTFHLHPGTTFSNGEAVDANAFIRGMTRAVKQAAASDVAYHMAGIAGYADIHGTGD
                     PNSKPTATTFSGLSAPDADTLAVKLSAPDCEFDKKTLQPVMSPVPASAGEANNKTFND
                     MPIGNGPFKMKEPWHHDQSITLVRNDSYFGTKAHLDEVDLTIQPSQDALQAEYKGLQS
                     GQYDYARLPPELIPQAKAQYEPKGGFLHKLTYGINYLLVNVVNPPLNKADARKAVSLA
                     IDRQAIIDGVFKGLQTKATSIIPPPLKAYYSPNVCDSCDKPDVPKAKQLAAGAGLAPG
                     TKLTLSFNTGGGHEAWVQAVQQQLQQNLGLKVDIQPMPFAELLKQEKADNASGLFRAA
                     WSADYPSAENFLFPLLSQKSLPPGDNRGRYVNKQFDDLLAQARQAPDETQRAS"
     gene            1560..2099
                     /locus_tag="VKX24_13305"
     CDS             1560..2099
                     /locus_tag="VKX24_13305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008375642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HLJ09507.1"
                     /translation="MRRVSLVGNTGSGKSTVAVALAFRLGVPCLELDAVFHQPGWTEL
                     AREEFRARVADAAAGDAWVIDGNYGAVRDLVWARADTVVWLDLSRPAVMRRVVSRTVR
                     RAARCQELWNGNREPWSNFWSLDPQRSIIVWAWTQHRRYRARYEAAMADPAWGHLRFV
                     RLRSAADVRRFLSSDELRG"
     gene            complement(2074..>2574)
                     /locus_tag="VKX24_13310"
     CDS             complement(2074..>2574)
                     /locus_tag="VKX24_13310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014175230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLJ09508.1"
                     /translation="ELLTGRLPAAAGIARLGPGVVVGILRQDRAAVGDTPVPGGSLLD
                     AVMAATGLKAQEARSLLAKFDLGAEHAVRGEAALSPGERSRAALAVLMARGTNFLVLD
                     EPTNHLDLEAIEALERALEDFDGTLLVVTHDRRLLESLRLNRRFDVAAGAVAEVEPVS
                     PGARRS"
BASE COUNT          313 a          846 c          972 g          443 t
ORIGIN      
        1 gcgaggcccg ctgggtctcg tcgggggcct ggcgggcctg ggcgaggagg tcgtcgaact
       61 gcttgttgac gtagcggccc cggttgtcac ccggcggcaa cgacttctgc gacagcagcg
      121 ggaacaggaa gttctcggcg ctcgggtagt cggcgctcca ggcggcccgg aagagcccgc
      181 tggcgttgtc ggccttctcc tgtttcagga gttcggcgaa gggcatcggc tggatgtcga
      241 ccttcaggcc gaggttctgc tgcagctgct gctgcacggc ctgcacccag gcctcgtggc
      301 ccccgccggt gttgaacgac agggtgagct tcgtcccggg ggcgaggccc gcgccggccg
      361 ccagctgctt cgccttgggc acgtcgggct tgtcgcagga gtcgcagacg ttggggctgt
      421 agtaggcctt gagcggcggc gggatgatcg acgtggcctt ggtctgcagg cccttgaaca
      481 ccccgtcgat gatcgcctgg cggtcgatgg ccagcgagac ggccttgcgg gcgtcggcct
      541 tgttgagcgg cgggttcacg acgttgacga gcaggtagtt gatcccgtag gtcagcttgt
      601 ggaggaagcc gcccttcggt tcgtactgcg ccttcgcctg ggggatcagc tccggtggca
      661 gccgggcgta gtcgtactgc ccggactgga ggcccttgta ctcggcctgc agggcgtcct
      721 ggctcggctg gatcgtgagg tcgacctcgt cgaggtgcgc cttcgtcccg aagtagctgt
      781 cgttgcggac gagcgtgatg ctctggtcgt ggtgccacgg ctccttcatc ttgaaggggc
      841 cgttcccgat cggcatgtcg ttgaacgtct tgttgttcgc ctcgccggcc gaggcgggca
      901 cggggctcat caccggctgg agggtcttct tgtcgaactc gcagtccggc gccgacagct
      961 tcaccgccag cgtgtcggcg tcgggggccg acaggccgga gaacgtcgtg gccgtgggct
     1021 tggagttggg gtcgccggtg ccgtggatgt cggcgtaccc ggcgatcccg gccatgtggt
     1081 aggcgacgtc ggaggccgcc gcctgcttca ccgcccgcgt catgccccgg atgaaggcgt
     1141 tggcgtcgac cgcctcaccg ttgctgaacg tcgtcccggg atggaggtgg aacgtccact
     1201 gcgtgcagtc gccgttcttg tcccacttgt cggccacgcc gggcttgatc tcggaggtgg
     1261 cgttgtcgat ctggacgagg ccggtgaaga cctgcttggt gacgaggatg ccctccgagt
     1321 cctgggagtt gtaggggtcg atggccgtcg gctcgacgat tccgagccgg aacacacctc
     1381 cctgcttgcc ccccggcgag gtcgtctcgg aggagctctt cttgctgctg ccgccgccgc
     1441 aggcgacggc caggagtgcc aacacagtcg ccagggcggc ggcgcgcacg aagcggggag
     1501 gacggcgcac ggggcgctcc tttcgtggtc gttacggcct agtctccacc attcctagcg
     1561 tgcggcgcgt gagcctggtg ggaaatacgg gttcggggaa gtccacggtg gccgtggcgc
     1621 tggccttccg gctgggtgtc ccgtgcctcg aactggacgc cgttttccat cagccgggct
     1681 ggacggaact ggcccgcgag gagttccggg cccgggtggc ggacgccgcc gccggcgacg
     1741 cctgggtcat cgacggcaac tacggcgccg tgcgggacct cgtctgggcc cgggccgaca
     1801 cggtggtgtg gctcgatctc tcccgccccg cggtgatgcg gcgggtggtg tcccgcaccg
     1861 tccggcgggc ggcccggtgc caggagctct ggaacggcaa ccgggagccc tggtcgaact
     1921 tctggagcct cgatccgcag cgctcgatca tcgtctgggc ctggacgcag caccgccgct
     1981 accgggcccg ctacgaggcg gcgatggccg atcccgcctg gggccacctc cggttcgtcc
     2041 ggctgcggtc ggcggcggac gtgcggcgct tcctcagctc cgacgagctc cggggctgac
     2101 cggctcgacc tcggcgacgg cgccggcggc cacgtcgaag cggcggttca gccggagcga
     2161 ctccagcagc cggcggtcgt gggtcacgac gaggagggtc ccgtcgaagt cctccagggc
     2221 ccgttccagg gcttcgatcg cctccaggtc gaggtggttg gtcggctcgt cgaggacgag
     2281 gaagttggtg ccccgggcca tgaggacggc cagcgccgcc cgggaccgct cccccggtga
     2341 cagtgccgcc tcgccccgga cggcgtgctc ggcgccgagg tcgaatttgg ccaggagcga
     2401 gcgggcctcc tgagccttga gaccggtggc ggccatgacc gcgtcgagga gggacccgcc
     2461 cggaaccggc gtgtccccca ccgccgcccg gtcctggcgg aggatcccca cgacgacgcc
     2521 cgggcccagc cgggcgatcc cggccgcggc cgggagccgg cccgtgagga gctc
//
LOCUS       DATGJT010000762         4260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1035509, whole genome shotgun sequence.
ACCESSION   DATGJT010000762 DATGJT010000000
VERSION     DATGJT010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 4260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4260
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035509"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..120)
                     /locus_tag="VKX24_13315"
     CDS             complement(<1..120)
                     /locus_tag="VKX24_13315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HLJ09509.1"
                     /translation="MEPVRQVTGRAVPLDRADVDTDQIIPASWLKRIERTGFGE"
     gene            complement(129..1526)
                     /gene="leuC"
                     /locus_tag="VKX24_13320"
     CDS             complement(129..1526)
                     /gene="leuC"
                     /locus_tag="VKX24_13320"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018504523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HLJ09510.1"
                     /translation="MAKTLSEKVWDAHVVRHEEGEPDLLYIDLHLVHEVTSPQAFDGL
                     RLAGRAVRRPDLTLATMDHNVPTQNIDQPVADQVSARQMEALARNCAEFGIRLYPMGN
                     PEQGIVHVIGPQLGLTQPGLTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTLPQ
                     RRPGTMAISVDGELPAGVTAKDVILGIIGRIGTSGGVGSVIEYRGSAIRSLSMEGRMT
                     VCNMSIEAGARAGMIAPDDTTFAYLEGRPHAPKGKAWEAALDAWRALPTDAGAAFDKE
                     IVIEAAELRPYVSWGTNPGQVVGLDEAVPDPDSFLEATARDAAARALRYMALEPGTAI
                     RDIAVDAVFLGSCTNGRLEDLRTAADVVRGRHVAAGVRALVVPGSMQVKAAAEAEGLD
                     DVFTAAGFEWREAGCSMCLGMNPDTLSPGERCASTSNRNFEGRQGPGGRTHLVSPAVA
                     AATAVAGRFTSPADL"
     gene            1562..2284
                     /locus_tag="VKX24_13325"
     CDS             1562..2284
                     /locus_tag="VKX24_13325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013133035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HLJ09511.1"
                     /translation="MDSLASGVGVLDKSVAVLAALAERGPLSLAGLVEATGLSRATAH
                     RLAAALEVHRLVGRDGAGRYRLGLRLLGWAGAVSAEIGLVEAARPVLEGLRDETGESA
                     QLFVRDGDSRLCVAASERPSGLRDTVPVGAVLPIDRGSGGKVLLAFGDGGGGPGIDPS
                     ELETIRRRGFAVSVAEREEGVCSVSAPVLDAGGRIHAALGVSGPINRLGRQPGRRLAG
                     PVVAAARELERRAGLAGPAAGG"
     gene            2434..2727
                     /locus_tag="VKX24_13330"
     CDS             2434..2727
                     /locus_tag="VKX24_13330"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HLJ09512.1"
                     /translation="MVFTTGAGTLKGQAIRRDPRVCLCVDDERPPFSFVIVEGKAEVC
                     DDPDAKLVWATRIGGRYMGTENADAYGRRNAVPQELLVRLRPTHVVAQAGIAE"
     gene            2795..2938
                     /locus_tag="VKX24_13335"
     CDS             2795..2938
                     /locus_tag="VKX24_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09513.1"
                     /translation="MAEMTSEQTEGTTAEKEQPQQEMCCDGKQTAEEHRHSSPDGKCC
                     IDK"
     gene            2993..>4260
                     /locus_tag="VKX24_13340"
     CDS             2993..>4260
                     /locus_tag="VKX24_13340"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HLJ09514.1"
                     /translation="MHVGADTGGTFTDLVSGDGRVVKVLSTPSDPGRALRAGLAELGA
                     GAADGHGGGRRPELLAHGTTVATNALLERRGARVALVTTDGFADVIEIGRQDRPSLYD
                     IWADRPAPLVPRELRFEVGGRLDAAGREIAVVGPAPAPALSGDVAAVAVCLLHSDLNP
                     AHERAVAAELERQGVDVSCSVDVSPEFREYERTATTVVNAYLRPVCRPYLSQLRDLAD
                     EVLVMTSAGGLVGSDAAARLPAALLLSGPAGGVRAGAAVAAACGYPDAVTFDMGGTST
                     DVCLVRGGVPEPAPGREVAGFPVRLPALDIHTIGAGGGSIARLDPGGALVVGPESAGA
                     EPGPACYGRGGTAPTVTDADLVLGRIPAEAAFPGLGRLDVEAAGRALLGALGGSGAPG
                     GSGGPGGSAADLAAGVVAVVDAAMEQAVRAV"
BASE COUNT          507 a         1471 c         1714 g          568 t
ORIGIN      
        1 ttcgccgaag cccgtccgct cgatccgctt gagccaggag gcggggatga tctggtcggt
       61 gtcgacgtcg gcccggtcca gggggacggc ccggccggtg acctggcgta ccggttccat
      121 gcctgctcct aaagatcggc cggggaggtg aatcgcccgg cgacggcggt ggcggcggcc
      181 acggcgggcg aaacgaggtg ggtgcgcccc ccgggcccct ggcggccttc gaagttgcgg
      241 ttggaggtcg aggcgcagcg ctcgcccggc gagagtgtgt cggggttcat cccgaggcac
      301 atggagcagc cggcctcccg ccactcgaac ccggcggcgg tgaacacgtc gtcgaggccc
      361 tcggcctcgg cggccgcctt cacctgcatg gagccgggga ccacaagggc ccgcacgccg
      421 gcggcgacgt gccggccccg cacgacgtcg gccgccgtgc gcaggtcctc cagacggccg
      481 ttggtgcagg acccgaggaa cacggcgtcg acggcgatgt cacggatggc ggtgccgggc
      541 tcgagggcca tgtaccgcag ggcgcgggcg gcggcgtcgc gggcggtcgc ctccaggaac
      601 gagtcggggt cggggacggc ctcgtcgagc ccgacgacct gtccggggtt ggtgccccag
      661 ctgacgtagg gccggagctc cgcggcctcg atgacgatct ccttgtcgaa cgccgccccg
      721 gcgtcggtgg gcagcgcccg ccaggcgtcg agcgccgcct cccaggcctt gcccttgggg
      781 gcgtggggcc ggccctcgag gtaggcgaag gtcgtgtcgt cgggggcgat catcccggcc
      841 cgggcgccgg cctcgatcga catgttgcag acggtcatcc ggccctccat cgacaggctg
      901 cggatggcgg agccccggta ctcgatgacc gagccgacgc cgccgctggt gccgatccgg
      961 ccgatgatgc cgagaatgac gtccttggcg gtgacgccgg ccggcagctc gccgtcgacg
     1021 ctgatcgcca tcgtgcccgg ccggcgctgg ggcagcgtct gggtcgccag cacgtgctcg
     1081 acctcgctgg tcccgatccc gaaggccagc gccccgaagg cgccgtgggt cgaggtgtgg
     1141 ctgtcgccgc agacgatcgt gaggccgggc tgggtcaggc cgagctgggg gccgatcacg
     1201 tggacgatgc cctgctccgg gttgcccatg gggtagaggc ggatgccgaa ctcggcgcag
     1261 ttccgggcca gcgcctccat ctgccgggcc gacacttggt cggccaccgg ctggtcgatg
     1321 ttctgcgtcg gcacgttgtg gtccatggtg gccagcgtga ggtcggggcg gcggaccgcc
     1381 cggccggcca ggcgcagccc gtcgaaggcc tgcggcgacg tcacctcgtg gacgaggtgg
     1441 agatcgatgt agagcaggtc gggttcgcct tcctcgtggc ggacgacgtg ggcgtcccac
     1501 accttctccg acagggtttt cgccatgtgc atctcacatt ctgagacggt aatatcgaga
     1561 tgtggacagt ttagcatccg gagtgggggt cctggacaag tcggtggccg tgctggccgc
     1621 cctcgccgag cggggcccgt tgtccctggc cgggctggtg gaggcgaccg gcctgtcgcg
     1681 ggccaccgcc caccggctgg cggcggcgct ggaggtgcac cgtctcgtcg gccgggacgg
     1741 cgccggccgc taccggctgg gcctgcgcct gttgggctgg gcgggagcgg tgagcgccga
     1801 gatcgggctg gtggaggcgg cccgtccggt gctggagggc ctccgggacg agacgggtga
     1861 atcggcccag ctcttcgtgc gcgacggcga cagccggctg tgcgtcgccg cctcggagcg
     1921 gccgtcgggc ctgcgcgaca ccgtcccggt gggggcggtg ctgccgatcg accggggatc
     1981 cggcgggaag gtcctcctgg ccttcggcga cggcggcggc ggtcccggga tcgacccctc
     2041 cgagctggag acgatccgcc gccggggctt cgcggtgagc gtggccgagc gggaggaggg
     2101 cgtgtgcagc gtcagcgctc ccgtcctcga cgccgggggc cggatccacg ccgccctcgg
     2161 cgtgagcggg ccgatcaacc ggctcggccg ccagcccggc cgccgcctgg ccgggccggt
     2221 ggtggccgcc gcccgggagc tcgagcgccg ggccggcctt gccgggccgg ccgccggcgg
     2281 gtgacagact ccccgccatg cacgtgatga gcgaacagga gtggaaggcg ttcctcaccg
     2341 ccgagccgcc ccgcaccggg aagctggcca cgatgaggaa ggacgggcgg ccccgtcgcc
     2401 cccatctggt acgacctcga cgacgacggc acgatcgtct tcaccaccgg ggcggggacg
     2461 ctgaagggcc aggcgatccg gcgggatccc cgggtctgcc tctgcgtcga cgacgagcgc
     2521 ccgccgttct cgttcgtgat cgtggagggc aaggccgagg tctgcgacga tcccgacgcc
     2581 aagctggtgt gggcgacccg gatcggcggc cgctacatgg ggacggagaa cgccgacgcc
     2641 tacgggcggc gcaacgccgt gccccaggag ctcctggtcc ggctgcgccc gacccacgtg
     2701 gtggcccagg ccggcatcgc cgagtgatcg ggcccggtgt ggcccgtcga cgggcggggt
     2761 agagcgctgc ctgacccagt ctcgaggagg agcgatggcg gagatgacgt cggagcagac
     2821 ggaagggacg acggccgaga aggagcagcc gcagcaggag atgtgctgcg acggcaagca
     2881 gacggccgag gagcaccggc acagctcgcc cgacgggaag tgctgtatcg acaagtgacc
     2941 tgtcgccggc gggatcgaca ccgtcccgcc ggcgaggcca gactcccggg gcgtgcacgt
     3001 cggagccgac accgggggaa cgttcaccga tctcgtgagc ggcgacggcc gggtcgtgaa
     3061 ggtgctgtcg acgccgtccg atcccgggcg ggcgctgcgc gccgggctgg ccgagctcgg
     3121 cgcgggcgcc gctgacggcc atggcggcgg ccggcggccg gagttgctgg cccacgggac
     3181 gacggtggcc accaacgccc tgttggaacg gcgcggcgcc cgggtggcgc tggtgacgac
     3241 cgacggcttc gccgacgtga tcgagatcgg ccgccaggac cggccgtcgc tctacgacat
     3301 ctgggcggac cgtcctgcgc cgctggtgcc ccgggagctg cgcttcgagg tcggcggccg
     3361 gctcgacgcc gccggccggg agatcgccgt ggtgggaccg gcgccggcgc cggcgctctc
     3421 cggcgacgtg gcggcggtgg cggtgtgcct gctccactcc gacctcaacc cggcccacga
     3481 gcgggcggtg gcggcggagc tggagcggca gggagtcgac gtgtcgtgct ccgtcgacgt
     3541 ctcgccggag ttccgggagt acgagcggac ggcgacgacg gtggtcaacg cctacctccg
     3601 cccggtgtgc cggccgtatc tctcccagct gcgcgacctg gccgacgagg tgctggtgat
     3661 gacgtcggcc ggcggtctgg tcggcagcga tgccgcggcc cggctcccgg cggcgctcct
     3721 gctgtcgggg ccggcgggcg gggtccgggc cggagcggcg gtggccgccg cctgcggtta
     3781 ccccgatgcc gtcaccttcg acatgggcgg gacgagcacc gacgtgtgcc tcgtgcgggg
     3841 cggggtcccg gagccggccc cgggccggga ggtggcgggg ttccccgtcc gcctgccggc
     3901 gctcgacatc cacacgatcg gcgccggcgg cggctccatc gcccggctcg accccggcgg
     3961 cgccctggtc gtcgggccgg agagcgccgg cgccgagccg gggccggcct gctacggccg
     4021 gggcgggacg gcgccgacgg tcaccgacgc cgatctcgtc ctcggccgga ttccggccga
     4081 ggcggcgttc cccggtctcg gccggctcga cgtcgaggcc gccggacggg ccctgctcgg
     4141 cgcactgggc ggttccgggg ctcccggcgg ctcggggggt ccaggcggtt cggccgctga
     4201 cctggccgcc ggcgtggtgg cggtggtcga cgcggccatg gaacaggcgg tgcgagcggt
//
LOCUS       DATGJT010000763         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1553439, whole genome shotgun sequence.
ACCESSION   DATGJT010000763 DATGJT010000000
VERSION     DATGJT010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553439"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="VKX24_13345"
     CDS             <1..348
                     /locus_tag="VKX24_13345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09515.1"
                     /translation="VARVLREALDSPELGSLEPWVRGEFHRGYPSDLAGAGRALSTYD
                     GRPLAPGVVVPCAVVVSTLDQLVRPEKQYELADALGAETYPIAADHFAPLNRGPAFAR
                     AVAAAVEQVAGKL"
     gene            complement(350..>2225)
                     /locus_tag="VKX24_13350"
     CDS             complement(350..>2225)
                     /locus_tag="VKX24_13350"
                     /inference="COORDINATES: protein motif:HMM:NF009381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLJ09516.1"
                     /translation="DFDPEEHKRGISTSVSILPLEYEGFKLNILDCPGYADFVGEVAA
                     ALRVADLLLFVISAVEGVEVQAEMVWKMAEQAGLPRAFFVNKLDRDRASFARTCDDLK
                     NHFGAGVAPLQLPIGEEAALSGVVDLLTDTAYSYSDGRASSGPVPEGLAEQEHSVHDA
                     LVEGIVVADDDLMERYLGDEPIDSKELAGALAKGVAAATVFPVLCGSATKLVGIDRLC
                     RFLADEAPAPQANGDGPPAAFVFKTIADPYVGRVNVFKVMSGKVLPDAVLTNGRTMGD
                     ERLHQLLTLRGREQEPVAEVPAGDIAAVAKLNDTSTGDVLAQRGADVSIEPFESLEPV
                     LPTAIRPKSKADEDKLANALHRLQDEDPVLKVERNAETHQTLLWGIGETHLSIALEKL
                     QRKYGVEVEQEDVKVAYRETVSGKAEAEGKYKKQTGGHGQFGVAFLRVEPKERGGGFE
                     FSDEIVGGAIPRQFIPAVEKGIVDTIATGGALGFPVVDVKVTCFDGKYHPVDSSEMSF
                     KMAGSLGFKEAAAKARPVLLEPISELVITVPEAYQGDVMGDLNSKRGRIQGTTSVGGG
                     EQEITALVPTSEVIRYAIDLRSLTGGRGRFTATHSHYDPAPPNLADKIVAETAAAREG
                     "
BASE COUNT          284 a          807 c          785 g          349 t
ORIGIN      
        1 gtggcccgcg tcctgcgcga agcgctcgac tcgccggagc tcgggtcgct cgagccgtgg
       61 gtgcggggcg agttccaccg cggctacccg tcggacctgg ccggcgccgg gcgggccctg
      121 tcgacctacg acggccgccc gctggcgccc ggcgtcgtcg tcccctgcgc cgtggtcgtc
      181 tcgacgctgg accagctcgt ccgccccgag aagcagtacg agctggccga cgccctcggc
      241 gccgagacct atcccatcgc cgccgaccac ttcgccccgc tcaaccgcgg cccggccttc
      301 gcccgggcgg tcgccgccgc ggtggagcag gtggccggga agctctgacc tagccctccc
      361 gggcggcggc ggtttcggcc acgatcttgt cggccaggtt gggcggggcc gggtcgtagt
      421 gggagtgcgt ggccgtgaag cggccccggc cgccggtcag cgaccgcagg tcgatggcgt
      481 agcggatgac ctccgaggtg ggcaccaggg cggtgatctc ctgctcgccg cctccgacgg
      541 aggtggtgcc ctggatgcgg ccccgcttgg agttgaggtc gcccatcacg tcgccctggt
      601 aggcctcggg gacggtgatc accagctcgc tgatcggctc caggagcacc gggcgggcct
      661 tggccgccgc ctccttgaac cccagcgaac cggccatctt gaagctcatc tcggagctgt
      721 cgacggggtg gtacttgccg tcgaagcagg tgaccttgac gtcgaccacc gggaagccga
      781 gggcgccgcc ggtggcgatg gtgtcgacga tccccttctc caccgccggg atgaactggc
      841 gggggatggc gccgcccacg atctcgtcgg agaactcgaa gccgccgccc cgctccttcg
      901 gctccacccg caggaacgcc acgccgaact gcccgtggcc gccggtctgc ttcttgtact
      961 tgccctccgc ctcggccttg ccggacaccg tctcccggta ggcgaccttc acgtcctcct
     1021 gctcgacctc gacgccgtac ttgcgctgca gcttctccag cgcgatcgag aggtgcgtct
     1081 cgccgatgcc ccacagcagc gtctggtgcg tctcggcgtt gcgctcgacc ttgaggacgg
     1141 gatcctcgtc ctggaggcgg tgcagcgcat tggccagctt gtcctcgtcg gccttgctct
     1201 tcggccggat ggcggtgggc aggacgggct cgagcgattc gaagggctcg atggacacgt
     1261 cggccccccg ctgggcgagg acgtcgccgg tggacgtgtc gttcagcttg gccacggcgg
     1321 cgatgtcgcc ggccgggacc tcggcgaccg gctcctgctc ccggccccgc agcgtcagca
     1381 gctggtggag ccgctcgtcg cccatcgtcc ggccgttggt gaggacggcg tcgggcagca
     1441 ccttgcccga catcaccttg aagacgttga cccgccccac gtaggggtcg gcgatggtct
     1501 tgaacacgaa cgccgccggc gggccgtcgc cgttcgcctg gggcgccggc gcctcgtcgg
     1561 ccaggaaccg gcacaggcgg tcgatgccga ccagcttggt ggcactgccg cacagcaccg
     1621 ggaacaccgt ggccgcggcc acgcccttgg ccagcgctcc ggccagctcc ttggagtcga
     1681 tcggctcgtc gccgaggtag cgctccatca ggtcgtcgtc ggccaccacg atgccctcga
     1741 ccagcgcgtc gtggaccgag tgctcctgct cggccagccc ctcgggcacc gggccggagc
     1801 tggcccgccc gtccgaatag gagtaggcgg tgtcggtcag caggtcgacc acccccgaca
     1861 gcgccgcctc ctcgccgatc ggcagctgga gcggggcgac gccggcgccg aagtggttct
     1921 tcaggtcgtc gcaggtgcgg gcgaagctgg cccggtcgcg gtcgagcttg ttgacgaaga
     1981 aggcccgggg gaggccggcc tgctccgcca tcttccagac catctcggcc tggacctcca
     2041 cgccctccac cgccgagatc acgaacagca ggaggtcggc cacccgcagg gcggcggcga
     2101 cctcgccgac gaagtcggcg tagccggggc agtcgaggat gttgagcttg aacccctcgt
     2161 attccagcgg gaggatagac accgaggtcg agatgccccg cttgtgctct tcggggtcga
     2221 agtcc
//
LOCUS       DATGJT010000764         5859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_933249, whole genome shotgun sequence.
ACCESSION   DATGJT010000764 DATGJT010000000
VERSION     DATGJT010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 5859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5859
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933249"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /locus_tag="VKX24_13355"
     CDS             complement(<1..1123)
                     /locus_tag="VKX24_13355"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HLJ09517.1"
                     /translation="MTASPGVADRLATLVSRARALAPGEVDDLLDVLGPDGFAWLRGG
                     SGFVTAGVAARIPVPAGPGRFERAAETVTAALRSIAVDGPSPMAGAGPGGGPVAVGAL
                     PFDDRRPWSLVVPAVVVVRRPDGTGWVTTTTAAATAADDVGGVNGHPAAVEPGFAVAL
                     TEAPGRAVWTESVRRILSAIDTGDVRKVVLARQLIVEAGAAFDRRTVLDRLRRSHPSC
                     FTYAVGGFVGASPELLVRRRGEEVASCPMAGSVRRGATPEEDEALTAGLRRSVKEAEE
                     HRLLVDAVVAALAPVCAGRPAAGEPEVVRFPTVSHLATRVSGVLRRPAPSALALAGLL
                     HPTPAVGGLPRAAALATIAALEGFDRGLYAGPVGWVDAAG"
     gene            complement(1120..1830)
                     /locus_tag="VKX24_13360"
     CDS             complement(1120..1830)
                     /locus_tag="VKX24_13360"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HLJ09518.1"
                     /translation="MTPLPTGAEKVAAVDTMFDAIAPGYDITNRVISLGLDVGWRRRT
                     VRSLGLEPGAVVLDLACGTGDLCRALSAQGLRPVGIDRSAGMLAAARISAPLVRGDAL
                     VLPFRSGAFDGVVCGFALRNFAALAPVLAECARVLRPGGRLGLLEVDAPSQPLLRLGH
                     RLWFGRVVPFVGGVVAARSGAPRAPAAAAYRYLPASVAYLPPTPELLALISSAGFTSV
                     ERRPLSGGIAQLLCGRRS"
     gene            complement(1827..2624)
                     /locus_tag="VKX24_13365"
     CDS             complement(1827..2624)
                     /locus_tag="VKX24_13365"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HLJ09519.1"
                     /translation="MRRSPARMRVEELAGRAGVSVDTVRFYQKQRLLPPPVREGRVAW
                     YTGEHLARMARVKELRRRGFTLAVIRRFLDGELDRADEPLVAAVSEAVGSSAGGGDDE
                     EFVTAGELAARSGVPLPLIESLAREGLLVPRLHEGEARYTVDDLAVVSAGLRLLEVGL
                     PLPGLLDLARTHHAAVRAVATQAVELFDSAVRRPLRESERAEEEKAEALVEAFRVVLP
                     AVSELVAHHFRRVLLQVAQEHLEAVGHPAEIAAASAEATRRLESVPS"
     gene            2920..3897
                     /locus_tag="VKX24_13370"
     CDS             2920..3897
                     /locus_tag="VKX24_13370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09520.1"
                     /translation="METRAGGPPAAAPLPDGQADPTLVSTGRPSPLAPRPAEIAAVVG
                     GSVVLLDSADGRTIRTLATHNEAATGGFPYLEGVSLSPDRKTVFYALAGDCGPAAIYR
                     VATDGRTPAETVLAGVSPAVSPDGRKLAYAVAVAGAEGAAPERHCQNALVVRDLTTGA
                     ERTWRYPDSPDYATALYRDAVISEIAWAPDSTRLAYTLSYEGDSVSILDTDKDADLSQ
                     TEEVVVPDGGGNSSHPAWQASTGLLALFNTRFECCFDDSYTGPPRALLLDPDRRIATA
                     LLPAGRRVSALDFDASGGHLLYVEGGRLYRRSGPQTPVALAAGVTHADW"
     gene            3894..>5859
                     /locus_tag="VKX24_13375"
     CDS             3894..>5859
                     /locus_tag="VKX24_13375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017586640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLJ09521.1"
                     /translation="MTSPPAVRIPGAVRTPPVVRTALRICPLCEATCGLEVGLSDADD
                     VVRIRGDRHDVWSAGYLCPKGPALRQLHEDPDRLRAPVVRRGGRLVEVGWDEAFTEAG
                     RRLGAVVAAHGREALGVYVGNPNVHNLGGQLYLKGLIKALGTANVFTASTVDQRPKEI
                     SSALMFGTPLSVAVPDVDRTDLLVVLGANPVDSNGSLATSPDWPGRLAALRARGGRLV
                     VVDPRRTATAEQADEHVPIRPGGDAFLLFAVLNVLAAEGLVDPGPAGPWLSGLDDVLG
                     LAAPFTPEAVEPATGVPAATVRRLARALAAAPTACVYGRIGTSTAEFGTLTSWLVDVV
                     NAATGNLDRPGGAMFAKAATGSANTTGPPRVGRPFRLGRHRSRVRGLPESLGELPVVC
                     LAEEIDTPGPGQVRALVTGAGNPVLSTPNADRLDAALATLDAYVAVDPYVNETTRHAD
                     VIFPVPSPLERGHCDLFFSQLALRNVARYTPPVLPLAPGMLDEWEVLARLTLAAGGLD
                     GGGEAGGLGAAGPASGDPAVVDDALVRSMAAGAVADPSSPVHGRDADEVVTALGGRRG
                     PERLLDLLLRTGPYGDGFGARPGGLSLDALLASPHGVDLGPLEPRLPDVLRTPSGMVE
                     LAPGLLVADVARLRAALEHGNGAGSLTLIGR"
BASE COUNT          727 a         2297 c         2194 g          641 t
ORIGIN      
        1 cgccggcggc gtcgacccag ccgaccgggc cggcatagag cccgcggtcg aagccctcca
       61 gggcggcgat cgtggccagg gccgcggccc ggggcaggcc gccgaccgcc ggcgtcggat
      121 ggagcagccc ggccagggcc agcgccgacg gcgccggccg gcgcaggacg ccgctgaccc
      181 gggtggcgag atgcgacacg gtcgggaacc ggacgacctc gggttccccg gccgccgggc
      241 ggccggcgca caccggcgcc agcgcggcca ccaccgcgtc caccagcagc cggtgctcct
      301 cggcctcctt gacggaacgg cgcagcccgg cggtgagcgc ctcgtcctcc tccggcgtgg
      361 cgccccggcg caccgagccc gccatggggc acgacgccac ctcctcgccc cgccggcgca
      421 ccaggagctc ggggctggcg ccgacgaacc cgccgacggc gtaggtgaag cacgacgggt
      481 ggctgcggcg cagccggtcg agcaccgtcc ggcggtcgaa cgccgcgccg gcctccacga
      541 tcagctgccg ggcgagcacg accttgcgga cgtcgccggt gtcgatggcc gagaggatcc
      601 gccggacgga ctccgtccac accgcccggc ccggagcctc ggtcagggcg acggcgaagc
      661 ctggctcgac ggccgccggg tgcccgttga ccccgccgac gtcgtcggcg gcggtcgcgg
      721 cggcggtggt ggtcgtcacc cagcccgtcc cgtcgggccg gcgcacgacg acgacggccg
      781 gcaccaccag cgaccaggga cggcggtcgt cgaagggcag cgcgcccacg gcgacgggcc
      841 cgccgccggg gccggctccg gccatcggcg acgggccgtc gacggcgatc gaccgcagcg
      901 ccgcggtcac cgtctccgcc gcccgctcga accggcccgg tcccgccggg accgggatcc
      961 gggcggcgac gccggcggtg acgaacccgc tcccgccccg cagccaggcg aagccgtccg
     1021 gcccgaggac gtcgagcagg tcgtcgacct cgcccggcgc gagggcccgg gcccggctca
     1081 cgagcgtggc gaggcggtcg gcgacgccgg gtgaggccgt cacgaccgcc tcccgcagag
     1141 gagctgggcg atgccgccgg acagcgggcg ccgttcgaca gaggtgaagc cggcggaaga
     1201 gatcagggcg agcagctccg gtgtcggggg caggtaggcc acggaggcgg gcagatagcg
     1261 gtaggcggcg gcggccgggg cccggggggc gccggagcgg gccgccacga cgccgccgac
     1321 gaacggcacg acccggccga accacagccg gtgcccgagc cggaggagag gctgcgacgg
     1381 ggcgtcgacc tccagcagcc cgagccggcc tccgggccgc aggacccggg cgcattcggc
     1441 cagcaccggg gcgagggcgg cgaagttgcg cagggcgaag ccgcacacga caccgtcgaa
     1501 ggcgccggag cggaagggca ggacgagggc gtcgccccgc accagcggcg ccgatatgcg
     1561 ggccgcggcg agcatcccgg ccgaccggtc gatgccgacc ggcctgagcc cctgcgccga
     1621 gagcgcccgg cagaggtcgc ccgtcccgca ggccaggtcg aggacgacgg cgccgggctc
     1681 gagcccgagc gaccgcaccg tccgccgacg ccagccgacg tcgaggccga gcgagatgac
     1741 ccggttggtg atgtcgtagc ccggggcgat ggcgtcgaac atggtgtcga cggccgccac
     1801 cttctcggcc ccggtcggca gcggggtcat gacgggaccg actccagccg gcgggtggcc
     1861 tcggctgagg cggcggcgat ctccgccggg tgccccacgg cctcgaggtg ctcctgggcc
     1921 acctggagga gcacccgccg gaagtggtgg gcgacgagct cgctcaccgc cggcagcacc
     1981 acccggaacg cctcgaccag cgcctcggcc ttctcctctt cggcccgctc ggactcccgc
     2041 agcgggcggc gcaccgccga gtcgaacagc tccacggcct gggtcgccac cgcccgcacc
     2101 gcggcgtggt gcgtgcgggc caggtcgagc aggcccggca gcgggagacc gacctcgagg
     2161 agccgcaggc cggccgagac cacggccaga tcgtcgacgg tgtagcgggc ctcgccctcg
     2221 tgcagccggg ggacgaggag cccctcccgg gccagcgact cgatcagcgg cagcggcaca
     2281 cccgaccggg cggccagctc cccggcggtg acgaactcct cgtcgtcgcc gccgccggcc
     2341 gagctcccga cggcctccga gaccgcggcc accagcggct cgtcggcccg gtcgagctcc
     2401 ccgtcgagga accgccggat gaccgccagc gtgaagcccc gacggcgcag ctccttcacg
     2461 cgggccatcc gggccaggtg ctcgccggtg taccaggcga cgcggccttc ccggacgggc
     2521 gggggcagca gccgctgctt ctggtagaag cggacggtgt cgacggagac cccggctctg
     2581 ccggccagct cctccacccg catccgggcc gggctcctcc gcacgagcgg gaattctagg
     2641 agtgatcgct cccgtcgtgc gattccgggt tcgtccgccg ccgccagacc gaccggccgg
     2701 ctgaaacggc gcagagagcc ccgcagcgac gggtaggaac cgctagcgtg tgacgaccgg
     2761 tgcagcgacg cacgagtcaa ggggctggga ttgggcattc gcctggcggg ccgggagagc
     2821 gggatggcgg cgaagcgccc cctcgtggcc ctggcggtgg cagcaaccgt tgtcagcatt
     2881 gggtttttga cgctgggagg gtcccgcccg ggtcgtcggg tggagaccag ggcgggcggc
     2941 ccgccggcgg ctgcgccgct gccggacggg caggccgacc cgacgctggt cagcaccggg
     3001 cgcccgtccc ccctggcgcc gaggccggcc gagatcgccg ccgtcgtcgg cggatccgtg
     3061 gtgctcctcg acagcgccga cggccgcacc atccggacgc tggccaccca caacgaggcg
     3121 gccacgggcg gcttcccgta cctggagggc gtgtccctct ccccggaccg gaagaccgtc
     3181 ttctacgccc tggcgggcga ctgcggcccg gccgcgatct accgggtggc caccgacggc
     3241 cgaactccgg cggagaccgt cctggccggc gtctccccgg cggtgagccc cgacggccgc
     3301 aagctggcct acgccgtcgc cgtcgccggc gccgagggcg ccgccccgga gcggcactgc
     3361 cagaacgccc tcgtcgtgcg ggacctgacg accggcgccg agcgcacctg gcgctatccc
     3421 gactcgcccg actacgccac ggcgctctac cgcgacgccg tcatcagcga gatcgcctgg
     3481 gcgcccgact cgacccggct ggcctacacg ctgtcgtacg agggcgactc ggtgtcgatc
     3541 ctcgacaccg acaaggacgc cgacctctcg cagaccgagg aggtcgtcgt gcccgacggc
     3601 ggcggcaact ccagccaccc ggcctggcag gcctccaccg ggttgctggc gctgttcaac
     3661 acccgcttcg agtgctgctt cgacgacagc tacacgggcc cgccccgggc gctgctgctc
     3721 gaccccgacc gccggatcgc cactgcgctg ctccccgccg gccggcgggt ctcggccctc
     3781 gacttcgacg ccagcggcgg ccacctcctc tacgtggaag gcggccgcct ctaccggcgc
     3841 agcggtccac agacgcccgt cgccctggcg gcgggcgtga cccacgccga ctggtgacca
     3901 gcccgcccgc ggttcgcatt ccgggggccg tccgcacccc gccggtcgtc cgcaccgcgc
     3961 tgcggatctg cccgctgtgc gaggcgacgt gcgggctgga ggtggggctg tcggatgccg
     4021 acgacgtcgt ccgcatccgg ggcgaccgcc acgacgtctg gagcgccggc tacctctgcc
     4081 ccaagggccc ggccctcagg cagctccacg aggatcccga tcggctgcgg gcgccggtgg
     4141 tgcggcgcgg cggccgcctc gtcgaggtcg ggtgggacga ggccttcacc gaggccggcc
     4201 gccggctcgg cgccgtcgtg gcggcccacg ggcgggaggc gctgggggtc tacgtcggga
     4261 accccaacgt ccacaacctc ggcgggcagc tgtacctgaa aggcctcatc aaagcgctcg
     4321 gcaccgccaa cgtcttcacg gccagcaccg tcgaccagcg gccgaaggag atctcctcgg
     4381 ccctgatgtt cggcacgcca ctgagcgtcg ccgtccccga cgtcgaccgc accgaccttc
     4441 tggtggtgct cggcgccaac cccgtcgatt ccaacggcag tctggccacc agccccgact
     4501 ggcccggccg gctggccgcc ctccgggccc ggggcgggcg gctcgtggtc gtcgaccccc
     4561 ggaggacggc gacggcggag caggccgacg agcacgtccc catccggccc ggcggggatg
     4621 ccttcctcct gttcgcggtg ctgaacgtcc tggccgccga gggcctcgtc gacccgggcc
     4681 cggccgggcc gtggctttcg ggcctcgacg acgtcctcgg gctggcggcg ccgttcacgc
     4741 cggaggcggt cgagcccgcc accggcgtcc cggccgccac ggtccgccgg ctggcccggg
     4801 cgctggcggc ggcgcccacc gcctgtgtct acggccgcat cggcacctcc accgccgagt
     4861 tcgggacctt gacgtcgtgg ctggtcgatg tcgtcaacgc cgccaccggc aacctcgacc
     4921 gccccggcgg ggcgatgttc gccaaggcgg ccaccgggtc ggccaacacc acgggcccgc
     4981 cccgggtggg ccggccgttc cgactcggcc gccaccgcag ccgggtgcgg ggcctgccgg
     5041 agtcgctggg cgaactgccg gtcgtctgcc tggccgagga gatcgacacg cccggtccgg
     5101 gccaggtgcg ggccctggtc acgggggccg gcaacccggt gctgtccacg cccaacgccg
     5161 accggctcga cgccgccctg gccacgctcg acgcctacgt ggccgtagac ccctacgtca
     5221 acgagacgac ccgccacgcc gacgtgatct tccccgtccc ttcgccactg gagcggggtc
     5281 actgcgacct gttcttctcg cagctggcgc tgcgcaatgt cgcccgctac acgccgccgg
     5341 tgctgcccct cgccccgggg atgctcgacg agtgggaggt gctggcccgc ctgacgctgg
     5401 cggccggcgg gctcgacggc ggcggcgagg ccggcgggct cggggccgcc ggcccggcga
     5461 gcggcgaccc ggcggtggtc gacgacgcgc tcgtccggtc catggccgcc ggcgccgtgg
     5521 ccgacccgtc gagcccggtc cacggccgcg acgccgacga ggtcgtcact gcgctcgggg
     5581 ggcggcgggg cccggagcgg ctgctcgacc tgctgctgcg gaccggcccc tacggcgacg
     5641 gcttcggcgc ccgccccggc gggctgtcgc tcgacgccct gctggcctcg ccccacggcg
     5701 tcgacctcgg cccgctcgag ccccgcctgc ccgacgtgct ccgcaccccg agcgggatgg
     5761 tggagctggc cccgggactg ctggtggccg acgtcgcccg gctccgtgcg gcgctggagc
     5821 acggcaacgg ggccggttcg ctgacgctca tcggccggc
//
LOCUS       DATGJT010000765         3931 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1241510, whole genome shotgun sequence.
ACCESSION   DATGJT010000765 DATGJT010000000
VERSION     DATGJT010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 3931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3931
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1241510"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VKX24_13380"
     CDS             <1..394
                     /locus_tag="VKX24_13380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006161906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLJ09522.1"
                     /translation="RLLTGGPETPEGLEEGYFVKPTVFSDVKPDMKIAQEEIFGPVLA
                     ILPYDTEEEAIEIANDSLYGLAGGVWSGDPEHAKQVARKIRTGRVDVNGGAFNTLAPF
                     GGYKQSGNGRELGKFGLEEFLEIKAMSI"
     gene            448..1950
                     /locus_tag="VKX24_13385"
     CDS             448..1950
                     /locus_tag="VKX24_13385"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014376518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLJ09523.1"
                     /translation="MTETAARTPADTAGPEHVDVLILGAGISGLGAAYHLSDQRPGTT
                     FVLLETLDHIGGTWWTQKYPGVRSDSDLFTLGYRFKAWGGDPIATGEQILTYLGEVVE
                     ENDLARHIRFRHRVEHASWSSEDNRWTVTARNLDTDELVAFTCSFLWMCHGYYRHWQP
                     HRPEWEGLEDFQGTVVHTQEWPEDLDVTGKRVIVIGSGATAATLIPAIADDAAHVTML
                     QRSPTYYMARQNKNELADTLRELDIPPEWTHEIVRRQMFKLFEQMRQASAFNPEMAKT
                     FLIDEVRKQLPEDFDVEKHFTPAYRVWQQRLAILPGGDLFTKISEGKVSVVTDTIGRF
                     TETGIKTGSGEHLEADIIVTATGFELSVLGDVDFEVDGSEIDPADLVTYRGIMFTGLP
                     NLAYVFGYFRASWTLRADIISDFVCRLLAHMEATGTHKVVPTLRPEDADMERRPWVEP
                     DNFNPGYLMRSMHLLPKQGSHDPWTWGLEYGAEKQALADADLEDGTLRFT"
     gene            1975..2841
                     /locus_tag="VKX24_13390"
     CDS             1975..2841
                     /locus_tag="VKX24_13390"
                     /inference="COORDINATES: protein motif:HMM:NF014571.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046353 - aminoglycoside
                     3-N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAC(3) family N-acetyltransferase"
                     /protein_id="HLJ09524.1"
                     /translation="MAARRVSQSEVQAGAERLGLAGLPVCLHASLRSFPALEEGPATL
                     VDGLLACGATVMVATMANESFGVPAPADDRPGRNGIDYAAEDRRTGEVSRPGQRDRYD
                     PSRTEVDRVLGATPAYVAARPDRVRCRLPTGTFSAVGPLAASLIQAEVAADTFGPLRE
                     LVLRSGWVLLAGVGLNRMTLLHLAEVEAGRRAFVRWALGPDGRPTRSVGGGCSEGFEH
                     LAVPLASVEFRVRVGESLWRAYPAAETVALAAGAIVEDPSITRCGDPGCLECRDAIAG
                     GPIERPSPRAAG"
     gene            complement(3218..>3931)
                     /locus_tag="VKX24_13395"
     CDS             complement(3218..>3931)
                     /locus_tag="VKX24_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018761698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLJ09525.1"
                     /translation="CANDAALQCRPVAQRYLTPGIWNPLPLFEDVQKDHQLRNIQPLR
                     NYFRQARRGTLPAVMWIAPSQPDSEHPPGSVHQGQAYVTAIINAAMESPDWSSTAIFL
                     QWDDWGGFYDNAVPPRVDQNGFGLRVPALVISPYARRGYIDHQVLSSDAYLKFIEDDF
                     LGGSRLNPKTDGRPDPRPDVRENEKILGNLLSDFDFNQAPRPPVLLATNPRTDSPSIP
                     AYFAGKGPCVGCTATPPST"
BASE COUNT          594 a         1382 c         1375 g          580 t
ORIGIN      
        1 acggcttctc accggtggcc ccgagacgcc cgaggggctg gaggagggct acttcgtgaa
       61 gccgaccgtc ttctccgatg tcaagcccga catgaagatc gcccaggagg agatcttcgg
      121 cccggtgctc gcgatcctgc cgtacgacac cgaggaggaa gcgatcgaga tcgccaacga
      181 ctcgctctac ggcctggcag gtggcgtgtg gtcgggtgat ccggagcatg ccaagcaggt
      241 cgctcgaaag atccgtaccg gccgggtgga cgtgaacggc ggagcgttca acacgctcgc
      301 ccccttcggc ggctacaagc agtcgggcaa cgggcgcgag ctcgggaagt tcggcctcga
      361 ggagttcctc gagatcaagg cgatgtcgat ctgatggcga cccgcgtcgc gcgaggtgag
      421 ccgagcgcga ggggaaggaa gggtgcggtg accgagaccg cggccaggac ccccgccgac
      481 acggcgggtc ccgaacacgt cgatgtcctc atcctcggag ccgggatctc ggggctgggg
      541 gccgcctacc acctcagcga ccagcggccg ggcaccacgt tcgtgctgct cgagacgctc
      601 gaccacatcg gcggcacctg gtggacccag aagtacccgg gggtccgctc cgacagcgac
      661 ctgttcaccc tcggctaccg gttcaaggcg tggggcggcg acccgatcgc caccggcgag
      721 cagatcctca cctacctggg agaggtcgtg gaggagaacg acctggcccg ccacatccgg
      781 ttccggcacc gcgtcgagca cgcgtcctgg tcgagcgagg acaaccgctg gacggtcacc
      841 gcccgcaacc tcgacaccga cgagctcgtg gccttcacct gctccttcct ctggatgtgc
      901 cacggctact accgccactg gcagccgcac cgccccgagt gggagggcct ggaggacttc
      961 cagggcacgg tcgtgcacac ccaggagtgg cccgaggacc tcgacgtcac cggaaaacgg
     1021 gtcatcgtca tcggctccgg ggcgacggcg gcgaccctca tcccggccat cgccgacgac
     1081 gccgcgcacg tgaccatgct ccagcgctcg ccgacctact acatggcccg gcagaacaag
     1141 aacgagctgg ccgacacgct ccgcgagctc gacatcccgc ccgagtggac ccacgagatc
     1201 gtccgccgcc agatgttcaa gttgttcgag cagatgcggc aggcctccgc cttcaacccc
     1261 gagatggcga agaccttcct catcgacgag gtccgcaagc agctgcccga ggacttcgac
     1321 gtcgagaagc acttcacccc cgcctaccgg gtgtggcagc agcggctcgc catcctcccc
     1381 ggcggagacc tgttcaccaa gatctccgag ggcaaggtct ccgtcgtcac cgacacgatc
     1441 gggcggttca ccgagaccgg catcaagacc ggttcgggcg agcacctcga ggccgacatc
     1501 atcgtgaccg ccaccggttt cgagctctcg gtcctgggcg acgtggactt cgaggtcgac
     1561 gggtccgaga tcgacccggc agacctcgtc acctaccggg ggatcatgtt caccgggctc
     1621 ccgaacctcg cctacgtctt cggctacttc cgggccagct ggaccctgcg ggccgacatc
     1681 atcagcgact tcgtctgccg cctgctcgcc cacatggagg ccaccggcac ccacaaggtg
     1741 gtgccgaccc tgcgtcccga ggacgccgac atggagcgcc ggccctgggt ggagcccgac
     1801 aacttcaacc ccgggtacct catgcgctcg atgcacctcc tgcccaagca ggggagccac
     1861 gacccctgga cctggggcct cgagtacggc gccgagaagc aggcgctggc cgatgccgac
     1921 ctggaggacg ggaccctccg gttcacctag tccgccccgg ggcaggggga cgtcgtggcc
     1981 gcacggaggg tgtcgcagtc cgaggtgcag gcgggagccg aacgtctggg cctcgccggg
     2041 ctcccggtgt gcctgcacgc ctccctccgg tcgttcccgg ccctggagga gggcccggcg
     2101 accctcgtcg acggcctgct cgcctgcggg gcgacggtga tggtggccac catggccaac
     2161 gagagcttcg gggtccccgc gcccgccgac gaccgtccag gccgcaacgg catcgactac
     2221 gccgccgagg accgccgcac cggcgaggtc tcccgccccg gtcaacgcga ccgctacgac
     2281 ccgtcccgga ccgaggtcga ccgggtgctc ggggcgaccc cggcgtacgt ggccgcccgg
     2341 cccgatcggg tccggtgccg actgccgacc gggacgttct cggctgtcgg ccccctggcc
     2401 gcctcgctga tccaagccga ggttgcggcc gacaccttcg gccctctccg ggaactggtc
     2461 ctccgctcgg gctgggtgct cctcgcgggc gtcggcctca accgcatgac cctgctgcac
     2521 ctagccgagg tcgaggccgg ccgccgggcc ttcgtccgtt gggcccttgg acccgatggc
     2581 cggccgaccc gcagcgtggg cgggggctgc tccgaaggct tcgaacacct ggccgttccg
     2641 ctggcgtcgg tcgagttccg ggtccgggtc ggggagagcc tctggcgcgc ctacccggcg
     2701 gccgagacgg tggctcttgc ggccggggcc atcgtcgagg acccctcgat cacgcgctgt
     2761 ggcgatccgg gctgcctcga gtgccgggac gcgatcgcgg gcggcccgat cgagcgaccg
     2821 tcgccccgtg ccgcgggctg acgctcagga ccatcgcctc tggcgaagcc cggagcgctc
     2881 ctgcacgatc ggctgaggag gtggaacatg acctacgaca aggagaaggt gagggccctc
     2941 gtgtgcccgc tctgccggtc ccagggaacg ctcacaccga tccgacctcg gcgacgcttc
     3001 cgggggggcc cgtggtcctt cgccctcctc atcgccaagt cacatgagtg cagcgcatgc
     3061 ggagggacgt tcaacacggc ccagctgatc gaggcacaga aggcggcttg atccccccca
     3121 tcccgggccc cgccccctgg gcgccggggt ggggggatcg accgtcggag gtcgctgacg
     3181 ggccccgatc gcgaccggcg gcgccggacc gctgctctca ggtgctgggc ggcgtcgccg
     3241 tacagccgac gcacggccct ttgccggcga agtaggccgg gatgctcggt gagtccgtcc
     3301 tcgggttggt ggcgagcagg accgggggcc ggggcgcctg gttgaagtcg aagtcgctca
     3361 gcaggttgcc caggattttc tcgttctcgc gcacgtccgg gcgggggtcc ggccgcccgt
     3421 cggtcttggg gttgagacgg gatccgccga ggaagtcgtc ctcgatgaac ttgagatagg
     3481 cgtcgctgct caagacctgg tggtcgatgt agccgcgccg ggcatacggc gagatcacga
     3541 gcgccgggac ccggagcccg aacccgttct ggtccacccg gggtggcacg gcgttgtcgt
     3601 agaagccgcc ccagtcgtcc cactgcagga agatcgcggt ggagctccag tcggggctct
     3661 ccatggccgc gttgatgatg gcggtcacgt acgcctgacc ctggtggacg ctgccgggcg
     3721 ggtgctcgct gtccggctgt gagggagcga tccacatgac tgccgggagc gtgccccgcc
     3781 gcgcctggcg gaagtagttg cggagcggct ggatgttgcg gagctggtgg tccttctgca
     3841 cgtcctcgaa gagcgggagc gggttccaga tgcccggggt caggtagcgc tgtgccaccg
     3901 ggcggcactg gagggcggcg tcgttggcgc a
//
LOCUS       DATGJT010000766         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_515313, whole genome shotgun sequence.
ACCESSION   DATGJT010000766 DATGJT010000000
VERSION     DATGJT010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515313"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..450
                     /locus_tag="VKX24_13400"
     CDS             229..450
                     /locus_tag="VKX24_13400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09526.1"
                     /translation="MARRSKRKGVLDWWQTVADETKDLFDDTIDRMRDDDDDDELAKE
                     VADLKRSIIDLSAKLDALAAARPAAKTTP"
     gene            518..727
                     /locus_tag="VKX24_13405"
     CDS             518..727
                     /locus_tag="VKX24_13405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLJ09527.1"
                     /translation="MAKRRSARKGVLDWWQTVLDETKDLVDDSLDRFRDDADDDGELH
                     DDIADLKRAVAELNAKLDRLAAERK"
     gene            complement(740..2272)
                     /locus_tag="VKX24_13410"
     CDS             complement(740..2272)
                     /locus_tag="VKX24_13410"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HLJ09528.1"
                     /translation="MRKRDRVLQVASVLVELMAGEAKLRWQRSRNGLSDPDEFERARA
                     RALRQTLEHLGPLYIKVGQVLSTRPDLVSQTVIDALQDLHEQVMVRPFSEFEPVLEKN
                     LGFHWRYRFTEIDTDVPLGAASIAQVYRAVQTDGEEVVVKVQRPGVAAATRLDMEILA
                     QAVKLAMKRAPDIAEIFQPEAMLEVVFSAMRPEIDFTVEAANMDEFRDMLEQFDYLRV
                     PDVLDVTKEVLIMTKAPGVSIREMDLDAFHPKERELIGRDLCAMLFHGFMVDGLFHAD
                     PHPGNIFVAPGEPATVIDFGMVGRIDRRMALGYTRFMMATALNDGEAAGRAALEMGTL
                     TSRANVPGFLSDMQRYIPTMAHQTLQNMEFGSDFNQFLVFCTKRGIAVNPSIALFGKA
                     TANLEGSLRRLAPEITPFDVFRDSMGDIIRDQAKQMVAEEELLRIANEAFSASRSLPE
                     QLRYLAQAIVNGQYVLRTRDDSAVIHEAREDARARAMRRTLIGIAGAALWLDHRRRRP
                     PA"
BASE COUNT          372 a          786 c          816 g          333 t
ORIGIN      
        1 gggcgacgtc gcaaccggcc cgcgacgcca cctccctcac cgtcagcttc cccgccggac
       61 gggcggccag gatggcctgc gccgcctcga tcagggcccg gcgggcgtcg ccctcgggcc
      121 ggcggccccg acggggagca cgacttgacg gctcttccgg cttcaacata tgttgagaac
      181 aaagctcagc atttgttgaa cagtacaccg gacacgaagg gggaccggat ggcccgcagg
      241 tccaagcgca agggcgtcct cgactggtgg cagacggtcg ccgacgagac gaaggacctc
      301 ttcgacgaca ccatcgaccg catgcgggac gatgacgacg acgacgagct ggccaaggag
      361 gtcgccgacc tcaagcgctc gatcatcgac ctctcggcca agctcgacgc cctggcggcg
      421 gcccggccgg cggccaagac gaccccctga cggacccggg gggacggggg gtgtcccccc
      481 gacaacggcg gcgtgagccg ccaggaagga aaccgccatg gccaagcgcc gcagcgcccg
      541 caagggcgtc ctcgactggt ggcagaccgt cctcgacgag acgaaggacc tcgtcgacga
      601 cagcctcgac cgcttccgcg acgacgccga cgacgacggc gagctgcacg acgacatcgc
      661 cgacctgaag cgggcggtgg cggagctcaa cgccaagctc gaccgcctgg ccgccgagcg
      721 gaagtaacga cccgggctac tacgccggcg ggcgacgccg ccggtggtcg agccagagcg
      781 cggcgccggc gatcccgatc agggtgcggc gcatggcccg ggcccgggcg tcctcccggg
      841 cctcgtggat caccgccgaa tcgtccctgg tccgcagcac gtactgcccg ttgacgatcg
      901 cctgggcgag gtaacggagt tgctccggca acgaccggct ggcggagaag gcctcgttgg
      961 cgatccgcag cagctcttcc tcggccacca tctgcttggc ctggtcgcgg atgatgtcgc
     1021 ccatggagtc ccggaagacg tcgaacggcg tgatctcggg agcgaggcgc cgcagcgaac
     1081 cctcgaggtt ggcggtggcc ttgccgaaca gcgcgatcga cgggttgacg gcgatccccc
     1141 gcttggtgca gaagaccagg aactggttga agtcgctgcc gaactccatg ttctgcagcg
     1201 tctggtgggc catcgtcggg atgtagcgct gcatgtcgga caggaacccc ggcacgttgg
     1261 cccgcgacgt cagcgtcccc atctccagcg ccgcccggcc ggcggcctcg ccgtcgttga
     1321 gggcggtggc catcatgaag cgggtgtagc cgagggccat gcggcggtcg atgcggccca
     1381 ccatgccgaa gtcgatgacg gtggccggct cgccgggggc cacgaagatg ttgccggggt
     1441 ggggatcggc gtggaagagc ccgtccacca tgaagccgtg gaagagcatg gcgcacaggt
     1501 cccggccgat gagctcccgt tccttggggt ggaaggcgtc gaggtccatc tcccggatgg
     1561 agaccccggg ggccttggtc atgatcagga cctctttggt gacgtcgagg acgtcgggca
     1621 cgcggaggta gtcgaactgc tcgagcatgt cccggaactc gtccatgttg gccgcctcga
     1681 cggtgaagtc gatctccggc cgcatggccg agaacacgac ttcgagcatc gcctcgggct
     1741 ggaagatctc ggcgatgtcg ggggcccgct tcatggccag cttcaccgcc tgggccagga
     1801 tctccatgtc gaggcgggtg gcggcggcca cgccgggccg ctggaccttg acgacgacct
     1861 cctccccgtc ggtctgcacc gcccggtaga cctgggcgat cgacgccgcc ccgagcggca
     1921 cgtcggtgtc gatctccgtg aagcggtacc gccagtggaa gccgaggttc ttctccagga
     1981 cgggctcgaa ctccgagaac ggccggacca tcacctgctc gtggaggtcc tggagggcgt
     2041 cgatcaccgt ctgggacacg aggtccggcc gggtggacag gacctgcccg accttgatgt
     2101 agagcggtcc gaggtgctcc agcgtctggc gcagtgcccg ggcccgggcc cgttcgaact
     2161 cgtcggggtc ggacaggccg ttgcggctgc gctgccagcg gagcttcgcc tcgccggcca
     2221 tcagctcgac gagcacggag gccacctgca ggacacggtc ccgcttcctc accgctccgc
     2281 tccctctgtt ggcaccggtg tcaggat
//
LOCUS       DATGJT010000767         2479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Acidimicrobiia bacterium isolate SMAG_U9840
            k141_1243464, whole genome shotgun sequence.
ACCESSION   DATGJT010000767 DATGJT010000000
VERSION     DATGJT010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37965408
            Sequence Read Archive: SRR5579872
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiia bacterium (soil metagenome)
  ORGANISM  Acidimicrobiia bacterium
            Bacteria; Actinomycetota; Acidimicrobiia.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 15:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,684
            CDSs (total)                      :: 2,665
            Genes (coding)                    :: 2,641
            CDSs (with protein)               :: 2,641
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Acidimicrobiia bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243464"
                     /isolate="SMAG_U9840"
                     /isolation_source="soil"
                     /db_xref="taxon:2080302"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1298
                     /gene="boxB"
                     /locus_tag="VKX24_13415"
     CDS             <1..1298
                     /gene="boxB"
                     /locus_tag="VKX24_13415"
                     /EC_number="1.14.13.208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015003274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HLJ09529.1"
                     /translation="MGPEGSHAYDVYLRTAVSVDSEGWAHFDYVKMPDYRWGIFLADQ
                     VPDRKIGFGDAMGQPVWQQVPGEHRNTLRRLIVTQGDTEPASVEQQRWLGHRCPSLYD
                     LRNLFQVNVEEGRHLWAMVYLLHRYFGRDGRDEAEALLERNSGDLDNPRILGAFNEQT
                     PDWLSFFFFTYFTDRDGKYQLASLRESAFDPLSRTCQFMLKEEAHHMFVGASGVGRVV
                     QRTVELMKEHDTEDVRPFGGIDVATLQRYLNFHYSVSLDLFGAETSTNAANYYAAGLK
                     GRFHEESRADDHQLKSDYRTILTPENGGIGEREVLSLTALNATLRDDYVEDCAKGVER
                     WNRTLAEVGCELRLPHVGFHRAVGEFADAHVTPDGRIVPAEEWKAAEAKWLPTDDDQK
                     YVESLMQPVREPGKMAGWVAPPASGLHGKPVDYEYVKLS"
     gene            1318..>2479
                     /locus_tag="VKX24_13420"
     CDS             1318..>2479
                     /locus_tag="VKX24_13420"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase family protein"
                     /protein_id="HLJ09530.1"
                     /translation="MRGSAVYAHLWTTPEVEALLGDEGRLASWLDILAALARAQGELG
                     LIPAEAADEIARRAVLENLDMTYVVEQTRATEHSTLGLIRGVQQVVSAEAGEWFCYGA
                     TVQDVADTWCALVMRDVGRLVERELAAIEAGLRKLARRHRATAMAARTHGQPGLPVTF
                     GYKAAVLAAEVRRHRERLGDGATRWLVGQLGGAAGTGSLWGPARRPLVERFCDLLGLG
                     CPEGPWISARDRLAEFGSVLAMVCATLGKLGNEVLELQRPEIGELSEPFTPGAVGSIT
                     MPHKRNPERSEHLVTLARLARAESSVLVESMIVEHERDGRSWKAEWAAFPDVCRLTSA
                     SLRFARDLVDGLVVDAAAMAANVESGGGYLFSERVMAALAARLGKQTAHRLVY"
BASE COUNT          365 a          865 c          901 g          348 t
ORIGIN      
        1 agatggggcc cgaaggctcg catgcgtacg acgtctacct gcgcaccgcg gtgagcgtcg
       61 attccgaagg ctgggcgcat ttcgattacg tgaagatgcc cgactaccgc tggggcatct
      121 tcctcgccga ccaggtcccc gaccgcaaga tcggcttcgg cgacgccatg ggacagccgg
      181 tgtggcagca ggtaccgggc gaacaccgca acacgctgcg ccgcctcatc gtgacccagg
      241 gcgacaccga gccggcgagc gtcgagcagc agcgctggct cggccaccgc tgcccgagcc
      301 tctacgatct ccgcaatctg ttccaggtga acgtcgagga ggggcggcac ctctgggcga
      361 tggtctacct gctccaccgc tacttcggcc gtgacgggcg cgacgaggcc gaggcgctgc
      421 tggagcggaa ctccggcgac ctcgacaacc cccgcatcct cggcgccttc aacgagcaga
      481 cgcccgactg gctgtcgttc ttcttcttca cctacttcac cgaccgggac gggaagtacc
      541 agctggcctc gctgcgggag agcgccttcg acccgctgtc gcggacctgc cagttcatgc
      601 tgaaggagga ggcccaccac atgttcgtcg gcgcctccgg cgtcggccgg gtggtgcaac
      661 ggaccgtcga gctgatgaag gagcacgaca ccgaggacgt gcggcccttc ggcggcatcg
      721 acgtcgccac cctgcagcgc tacctcaact tccactacag cgtttccctc gacctgttcg
      781 gggccgagac gtcgaccaac gccgccaact actacgccgc cgggctgaag ggccgcttcc
      841 acgaggagag ccgcgccgac gaccaccagc tgaagagcga ctaccggacg atcctgaccc
      901 cggagaacgg cgggatcgga gagcgggagg tcctctcgct cacggccttg aacgccacgc
      961 tgcgcgacga ctacgtcgaa gactgcgcca agggcgtcga acgctggaac cggacgctgg
     1021 ccgaggtggg ctgcgagctc cgtctgcccc acgtcgggtt ccaccgggcg gtgggcgagt
     1081 tcgccgacgc ccacgtaacc cccgacgggc ggatcgtgcc ggccgaggaa tggaaggccg
     1141 ccgaggcgaa gtggctgccg accgacgacg accagaagta cgtggagtcg ctgatgcagc
     1201 cggtgcggga gccggggaag atggcgggct gggtcgcccc tccggcctcc ggcctccacg
     1261 gcaagcccgt cgactacgag tacgtgaagc tgtcgtagcc cgtagccttg gccgcctatg
     1321 cgcggctctg cggtctacgc ccatctctgg accacgccgg aagtcgaggc gctcctcggt
     1381 gacgaggggc ggctggcctc gtggctcgac atcctcgccg ccctggcccg ggcccagggg
     1441 gagctggggc tgatcccggc cgaggcggcc gacgagatcg cccggcgggc ggtgctcgag
     1501 aacctcgaca tgacctacgt cgtggagcag acccgcgcca ccgagcactc gacgctgggc
     1561 ctcatccggg gcgtgcagca ggtcgtctcg gccgaggccg gcgagtggtt ctgctacggc
     1621 gccacggtcc aggacgtcgc cgacacctgg tgcgcgctgg tcatgcgcga cgtcgggcgg
     1681 ctggtggaac gggagctggc ggcgatcgag gccgggctgc gcaagctggc ccggcgccac
     1741 cgggcgacgg ccatggcggc ccgcacccac ggtcagcccg gcctgccggt caccttcggc
     1801 tacaaggcgg cggtgctggc cgccgaggtc cgccggcacc gggagcggct cggcgacgga
     1861 gccacccgct ggctcgtcgg ccagctcggc ggggcggcgg ggacagggtc gctgtggggg
     1921 ccggcccggc gtccgctggt ggagcggttc tgcgacctgc tcgggctcgg ctgccccgag
     1981 gggccgtgga tctcggcccg ggaccggctg gccgagttcg ggtcggtgct ggccatggtc
     2041 tgcgccaccc tcggcaagct cggcaacgag gtgctggagc tgcagcggcc cgagatcggc
     2101 gagctctccg agccgttcac accgggcgcg gtcggcagca tcaccatgcc ccacaagcgg
     2161 aaccccgagc gctccgagca cctcgtgacg ctggcccggc tggcccgggc ggagtcgtcc
     2221 gtgctggtcg agtcgatgat cgtcgaacac gagcgggacg ggcgttcgtg gaaggcggag
     2281 tgggccgcct tccccgacgt gtgccggttg acgtcggcct cgctgcggtt cgcccgggac
     2341 ctggtcgacg gcctcgtcgt ggacgccgcg gccatggcgg ccaacgtcga gagcggcggc
     2401 ggctacctgt tctccgagcg ggtgatggcg gcgctggcgg ccaggctggg caagcagacc
     2461 gcccaccggc tggtctacg
//
